##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM97453v1 #!genome-build-accession NCBI_Assembly:GCF_000974535.1 ##sequence-region NZ_CP010441.1 1 4607634 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=83333 NZ_CP010441.1 RefSeq region 1 4607634 . + . ID=id0;Dbxref=taxon:83333;Is_circular=true;Name=ANONYMOUS;gbkey=Src;genome=chromosome;genotype=supQ80? _(hisG)1 e14- (McrA-) gyrA96 recA::cat(FRT)(CmR) recD1014 rpsL104(StrR) xyl-7 mtlA2(Fs) metB1(FS) mrr::tetAR;identified-by=Anthony Kingston;mol_type=genomic DNA;strain=K-12 MG1655 NZ_CP010441.1 RefSeq gene 607 747 . + . ID=gene0;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=SH03_RS00005;old_locus_tag=SH03_00005 NZ_CP010441.1 Protein Homology CDS 607 747 . + 0 ID=cds0;Parent=gene0;Dbxref=Genbank:WP_000831330.1;Name=WP_000831330.1;Note=in Escherichia coli transcription of this gene is enhanced by polyamines;gbkey=CDS;gene=rpmH;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11 NZ_CP010441.1 RefSeq gene 764 1123 . + . ID=gene1;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=SH03_RS00010;old_locus_tag=SH03_00010 NZ_CP010441.1 Protein Homology CDS 764 1123 . + 0 ID=cds1;Parent=gene1;Dbxref=Genbank:WP_000239730.1;Name=WP_000239730.1;Note=protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates;gbkey=CDS;gene=rnpA;product=ribonuclease P protein component;protein_id=WP_000239730.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1087 1344 . + . ID=gene2;Name=SH03_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00015;old_locus_tag=SH03_00015 NZ_CP010441.1 Protein Homology CDS 1087 1344 . + 0 ID=cds2;Parent=gene2;Dbxref=Genbank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1347 2993 . + . ID=gene3;Name=SH03_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00020;old_locus_tag=SH03_00020 NZ_CP010441.1 Protein Homology CDS 1347 2993 . + 0 ID=cds3;Parent=gene3;Dbxref=Genbank:WP_000378250.1;Name=WP_000378250.1;Note=functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria;gbkey=CDS;product=protein translocase component YidC;protein_id=WP_000378250.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3099 4463 . + . ID=gene4;Name=trmE;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;gene_synonym=mnmE,thdF;locus_tag=SH03_RS00025;old_locus_tag=SH03_00025 NZ_CP010441.1 Protein Homology CDS 3099 4463 . + 0 ID=cds4;Parent=gene4;Dbxref=Genbank:WP_001282346.1;Name=WP_001282346.1;Note=in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE;gbkey=CDS;gene=trmE;product=tRNA modification GTPase MnmE;protein_id=WP_001282346.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4706 4780 . + . ID=gene5;Name=SH03_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00030;old_locus_tag=SH03_00030 NZ_CP010441.1 Protein Homology CDS 4706 4780 . + 0 ID=cds5;Parent=gene5;Dbxref=Genbank:WP_001364348.1;Name=WP_001364348.1;gbkey=CDS;product=tryptophanase leader peptide;protein_id=WP_001364348.1;transl_table=11 NZ_CP010441.1 RefSeq gene 5001 6416 . + . ID=gene6;Name=tnaA;gbkey=Gene;gene=tnaA;gene_biotype=protein_coding;locus_tag=SH03_RS00035;old_locus_tag=SH03_00035 NZ_CP010441.1 Protein Homology CDS 5001 6416 . + 0 ID=cds6;Parent=gene6;Dbxref=Genbank:WP_001295247.1;Name=WP_001295247.1;Note=tryptophan indole-lyase%3B catalyzes the formation of indole and pyruvate from tryptophan%3B also has xysteine desulfhydrase activity;gbkey=CDS;gene=tnaA;product=tryptophanase;protein_id=WP_001295247.1;transl_table=11 NZ_CP010441.1 RefSeq gene 6507 7754 . + . ID=gene7;Name=SH03_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00040;old_locus_tag=SH03_00040 NZ_CP010441.1 Protein Homology CDS 6507 7754 . + 0 ID=cds7;Parent=gene7;Dbxref=Genbank:WP_000131925.1;Name=WP_000131925.1;Note=tryptophan transporter of high affinity;gbkey=CDS;product=low affinity tryptophan permease;protein_id=WP_000131925.1;transl_table=11 NZ_CP010441.1 RefSeq gene 7886 9061 . + . ID=gene8;Name=SH03_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00045;old_locus_tag=SH03_00045 NZ_CP010441.1 Protein Homology CDS 7886 9061 . + 0 ID=cds8;Parent=gene8;Dbxref=Genbank:WP_000085982.1;Name=WP_000085982.1;Note=Confers resistance to chloramphenicol;gbkey=CDS;product=multidrug resistance protein MdtL;protein_id=WP_000085982.1;transl_table=11 NZ_CP010441.1 RefSeq gene 9036 9995 . + . ID=gene9;Name=SH03_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00050;old_locus_tag=SH03_00050 NZ_CP010441.1 Protein Homology CDS 9036 9995 . + 0 ID=cds9;Parent=gene9;Dbxref=Genbank:WP_001311238.1;Name=WP_001311238.1;Note=Involved in anaerobic NO protection;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001311238.1;transl_table=11 NZ_CP010441.1 RefSeq gene 10152 10901 . + . ID=gene10;Name=SH03_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00055;old_locus_tag=SH03_00055 NZ_CP010441.1 Protein Homology CDS 10152 10901 . + 0 ID=cds10;Parent=gene10;Dbxref=Genbank:WP_001296581.1;Name=WP_001296581.1;gbkey=CDS;product=4'-phosphopantetheinyl transferase;protein_id=WP_001296581.1;transl_table=11 NZ_CP010441.1 RefSeq gene 10923 11489 . + . ID=gene11;Name=SH03_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00060;old_locus_tag=SH03_00060 NZ_CP010441.1 Protein Homology CDS 10923 11489 . + 0 ID=cds11;Parent=gene11;Dbxref=Genbank:WP_001291268.1;Name=WP_001291268.1;gbkey=CDS;product=chromate reductase;protein_id=WP_001291268.1;transl_table=11 NZ_CP010441.1 RefSeq gene 11543 12880 . - . ID=gene12;Name=SH03_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00065;old_locus_tag=SH03_00065 NZ_CP010441.1 Protein Homology CDS 11543 12880 . - 0 ID=cds12;Parent=gene12;Dbxref=Genbank:WP_000019348.1;Name=WP_000019348.1;Note=involved in the transport or adenine;gbkey=CDS;product=adenine permease AdeP;protein_id=WP_000019348.1;transl_table=11 NZ_CP010441.1 RefSeq gene 13045 13710 . + . ID=gene13;Name=SH03_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00070;old_locus_tag=SH03_00070 NZ_CP010441.1 Protein Homology CDS 13045 13710 . + 0 ID=cds13;Parent=gene13;Dbxref=Genbank:WP_000086486.1;Name=WP_000086486.1;Note=YieH%3B catalyzes the dephosphorylation of phosphoenolpyruvate%2C AMP and p-nitrophenyl phosphate%3B purine and pyrimidine nucleotides are secondary substrates%3B member of the haloacid dehalogenase-like hydrolases superfamily;gbkey=CDS;product=6-phosphogluconate phosphatase;protein_id=WP_000086486.1;transl_table=11 NZ_CP010441.1 RefSeq gene 13777 14244 . + . ID=gene14;Name=SH03_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00075;old_locus_tag=SH03_00075 NZ_CP010441.1 Protein Homology CDS 13777 14244 . + 0 ID=cds14;Parent=gene14;Dbxref=Genbank:WP_000116777.1;Name=WP_000116777.1;Note=might be involved in hypersensitivity to nitrofurzone;gbkey=CDS;product=protein CbrB;protein_id=WP_000116777.1;transl_table=11 NZ_CP010441.1 RefSeq gene 14293 14880 . + . ID=gene15;Name=SH03_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00080;old_locus_tag=SH03_00080 NZ_CP010441.1 Protein Homology CDS 14293 14880 . + 0 ID=cds15;Parent=gene15;Dbxref=Genbank:WP_000193072.1;Name=WP_000193072.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000193072.1;transl_table=11 NZ_CP010441.1 RefSeq gene 14942 15664 . - . ID=gene16;Name=SH03_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00085;old_locus_tag=SH03_00085 NZ_CP010441.1 Protein Homology CDS 14942 15664 . - 0 ID=cds16;Parent=gene16;Dbxref=Genbank:WP_038432707.1;Name=WP_038432707.1;gbkey=CDS;product=6-phosphogluconolactonase;protein_id=WP_038432707.1;transl_table=11 NZ_CP010441.1 RefSeq gene 15679 16848 . - . ID=gene17;Name=SH03_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00090;old_locus_tag=SH03_00090 NZ_CP010441.1 Protein Homology CDS 15679 16848 . - 0 ID=cds17;Parent=gene17;Dbxref=Genbank:WP_001336377.1;Name=WP_001336377.1;gbkey=CDS;product=xylanase;protein_id=WP_001336377.1;transl_table=11 NZ_CP010441.1 RefSeq gene 16875 18491 . - . ID=gene18;Name=SH03_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00095;old_locus_tag=SH03_00095 NZ_CP010441.1 Protein Homology CDS 16875 18491 . - 0 ID=cds18;Parent=gene18;Dbxref=Genbank:WP_000489881.1;Name=WP_000489881.1;gbkey=CDS;product=porin BglH;protein_id=WP_000489881.1;transl_table=11 NZ_CP010441.1 RefSeq gene 18560 19972 . - . ID=gene19;Name=SH03_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00100;old_locus_tag=SH03_00100 NZ_CP010441.1 Protein Homology CDS 18560 19972 . - 0 ID=cds19;Parent=gene19;Dbxref=Genbank:WP_000643228.1;Name=WP_000643228.1;gbkey=CDS;product=6-phospho-beta-glucosidase BglB;protein_id=WP_000643228.1;transl_table=11 NZ_CP010441.1 RefSeq gene 19991 21868 . - . ID=gene20;Name=SH03_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00105;old_locus_tag=SH03_00105 NZ_CP010441.1 Protein Homology CDS 19991 21868 . - 0 ID=cds20;Parent=gene20;Dbxref=Genbank:WP_000137296.1;Name=WP_000137296.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS beta-glucoside EIIBCA component;protein_id=WP_000137296.1;transl_table=11 NZ_CP010441.1 RefSeq gene 22002 22838 . - . ID=gene21;Name=SH03_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00110;old_locus_tag=SH03_00110 NZ_CP010441.1 Protein Homology CDS 22002 22838 . - 0 ID=cds21;Parent=gene21;Dbxref=Genbank:WP_001295251.1;Name=WP_001295251.1;Note=positive regulator of the beta-glucoside operon%3B transcriptional antiterminator;gbkey=CDS;product=cryptic beta-glucoside bgl operon antiterminator;protein_id=WP_001295251.1;transl_table=11 NZ_CP010441.1 RefSeq gene 23124 23849 . - . ID=gene22;Name=SH03_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00115;old_locus_tag=SH03_00115 NZ_CP010441.1 Protein Homology CDS 23124 23849 . - 0 ID=cds22;Parent=gene22;Dbxref=Genbank:WP_000377786.1;Name=WP_000377786.1;Note=regulates several genes involved in high affinity phosphate uptake%3B under conditions of high phosphate concentrations downregulates the PHO regulon;gbkey=CDS;product=phosphate-specific transport system accessory protein PhoU;protein_id=WP_000377786.1;transl_table=11 NZ_CP010441.1 RefSeq gene 23864 24637 . - . ID=gene23;Name=SH03_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00120;old_locus_tag=SH03_00120 NZ_CP010441.1 Protein Homology CDS 23864 24637 . - 0 ID=cds23;Parent=gene23;Dbxref=Genbank:WP_000063125.1;Name=WP_000063125.1;gbkey=CDS;product=phosphate import ATP-binding protein PstB;protein_id=WP_000063125.1;transl_table=11 NZ_CP010441.1 RefSeq gene 24820 25710 . - . ID=gene24;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=SH03_RS00125;old_locus_tag=SH03_00125 NZ_CP010441.1 Protein Homology CDS 24820 25710 . - 0 ID=cds24;Parent=gene24;Dbxref=Genbank:WP_001251998.1;Name=WP_001251998.1;Note=Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions;gbkey=CDS;gene=pstA;product=phosphate ABC transporter permease;protein_id=WP_001251998.1;transl_table=11 NZ_CP010441.1 RefSeq gene 25710 26669 . - . ID=gene25;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=SH03_RS00130;old_locus_tag=SH03_00130 NZ_CP010441.1 Protein Homology CDS 25710 26669 . - 0 ID=cds25;Parent=gene25;Dbxref=Genbank:WP_000741620.1;Name=WP_000741620.1;Note=part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions;gbkey=CDS;gene=pstC;product=phosphate ABC transporter permease;protein_id=WP_000741620.1;transl_table=11 NZ_CP010441.1 RefSeq gene 26756 27796 . - . ID=gene26;Name=SH03_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00135;old_locus_tag=SH03_00135 NZ_CP010441.1 Protein Homology CDS 26756 27796 . - 0 ID=cds26;Parent=gene26;Dbxref=Genbank:WP_000867146.1;Name=WP_000867146.1;gbkey=CDS;product=phosphate-binding protein;protein_id=WP_000867146.1;transl_table=11 NZ_CP010441.1 RefSeq gene 28110 29939 . - . ID=gene27;Name=SH03_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00140;old_locus_tag=SH03_00140 NZ_CP010441.1 Protein Homology CDS 28110 29939 . - 0 ID=cds27;Parent=gene27;Dbxref=Genbank:WP_000334099.1;Name=WP_000334099.1;Note=Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source;gbkey=CDS;product=glutamine--fructose-6-phosphate aminotransferase [isomerizing];protein_id=WP_000334099.1;transl_table=11 NZ_CP010441.1 RefSeq gene 30101 31471 . - . ID=gene28;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=SH03_RS00145;old_locus_tag=SH03_00145 NZ_CP010441.1 Protein Homology CDS 30101 31471 . - 0 ID=cds28;Parent=gene28;Dbxref=Genbank:WP_000933736.1;Name=WP_000933736.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;product=bifunctional protein GlmU;protein_id=WP_000933736.1;transl_table=11 NZ_CP010441.1 RefSeq gene 31824 32243 . - . ID=gene29;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=SH03_RS00150;old_locus_tag=SH03_00150 NZ_CP010441.1 Protein Homology CDS 31824 32243 . - 0 ID=cds29;Parent=gene29;Dbxref=Genbank:WP_001251965.1;Name=WP_001251965.1;Note=part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane;gbkey=CDS;gene=atpC;product=ATP synthase epsilon chain;protein_id=WP_001251965.1;transl_table=11 NZ_CP010441.1 RefSeq gene 32264 33646 . - . ID=gene30;Name=SH03_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00155;old_locus_tag=SH03_00155 NZ_CP010441.1 Protein Homology CDS 32264 33646 . - 0 ID=cds30;Parent=gene30;Dbxref=Genbank:WP_000190506.1;Name=WP_000190506.1;gbkey=CDS;product=ATP synthase subunit beta;protein_id=WP_000190506.1;transl_table=11 NZ_CP010441.1 RefSeq gene 33673 34536 . - . ID=gene31;Name=SH03_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00160;old_locus_tag=SH03_00160 NZ_CP010441.1 Protein Homology CDS 33673 34536 . - 0 ID=cds31;Parent=gene31;Dbxref=Genbank:WP_000896498.1;Name=WP_000896498.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;gbkey=CDS;product=ATP synthase subunit gamma;protein_id=WP_000896498.1;transl_table=11 NZ_CP010441.1 RefSeq gene 34587 36128 . - . ID=gene32;Name=SH03_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00165;old_locus_tag=SH03_00165 NZ_CP010441.1 Protein Homology CDS 34587 36128 . - 0 ID=cds32;Parent=gene32;Dbxref=Genbank:WP_001176745.1;Name=WP_001176745.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;gbkey=CDS;product=ATP synthase subunit alpha;protein_id=WP_001176745.1;transl_table=11 NZ_CP010441.1 RefSeq gene 36141 36674 . - . ID=gene33;Name=SH03_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00170;old_locus_tag=SH03_00170 NZ_CP010441.1 Protein Homology CDS 36141 36674 . - 0 ID=cds33;Parent=gene33;Dbxref=Genbank:WP_001288587.1;Name=WP_001288587.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;product=ATP synthase subunit delta;protein_id=WP_001288587.1;transl_table=11 NZ_CP010441.1 RefSeq gene 36689 37159 . - . ID=gene34;Name=SH03_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00175;old_locus_tag=SH03_00175 NZ_CP010441.1 Protein Homology CDS 36689 37159 . - 0 ID=cds34;Parent=gene34;Dbxref=Genbank:WP_001052219.1;Name=WP_001052219.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.;gbkey=CDS;product=ATP synthase subunit b;protein_id=WP_001052219.1;transl_table=11 NZ_CP010441.1 RefSeq gene 37221 37460 . - . ID=gene35;Name=SH03_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00180;old_locus_tag=SH03_00180 NZ_CP010441.1 Protein Homology CDS 37221 37460 . - 0 ID=cds35;Parent=gene35;Dbxref=Genbank:WP_000429386.1;Name=WP_000429386.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0;gbkey=CDS;product=ATP synthase subunit c;protein_id=WP_000429386.1;transl_table=11 NZ_CP010441.1 RefSeq gene 37507 38322 . - . ID=gene36;Name=SH03_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00185;old_locus_tag=SH03_00185 NZ_CP010441.1 Protein Homology CDS 37507 38322 . - 0 ID=cds36;Parent=gene36;Dbxref=Genbank:WP_000135625.1;Name=WP_000135625.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0;gbkey=CDS;product=ATP synthase subunit a;protein_id=WP_000135625.1;transl_table=11 NZ_CP010441.1 RefSeq gene 38331 38711 . - . ID=gene37;Name=SH03_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00190;old_locus_tag=SH03_00190 NZ_CP010441.1 Protein Homology CDS 38331 38711 . - 0 ID=cds37;Parent=gene37;Dbxref=Genbank:WP_000116695.1;Name=WP_000116695.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation;gbkey=CDS;product=ATP synthase I;protein_id=WP_000116695.1;transl_table=11 NZ_CP010441.1 RefSeq gene 39328 39951 . - . ID=gene38;Name=gidB;gbkey=Gene;gene=gidB;gene_biotype=protein_coding;locus_tag=SH03_RS00195;old_locus_tag=SH03_00195 NZ_CP010441.1 Protein Homology CDS 39328 39951 . - 0 ID=cds38;Parent=gene38;Dbxref=Genbank:WP_000932839.1;Name=WP_000932839.1;Note=glucose-inhibited division protein B%3B SAM-dependent methyltransferase%3B methylates the N7 position of guanosine in position 527 of 16S rRNA;gbkey=CDS;gene=gidB;product=ribosomal RNA small subunit methyltransferase G;protein_id=WP_000932839.1;transl_table=11 NZ_CP010441.1 RefSeq gene 40015 41904 . - . ID=gene39;Name=gidA;gbkey=Gene;gene=gidA;gene_biotype=protein_coding;locus_tag=SH03_RS00200;old_locus_tag=SH03_00200 NZ_CP010441.1 Protein Homology CDS 40015 41904 . - 0 ID=cds39;Parent=gene39;Dbxref=Genbank:WP_000499788.1;Name=WP_000499788.1;Note=GidA%3B glucose-inhibited cell division protein A%3B involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs;gbkey=CDS;gene=gidA;product=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG;protein_id=WP_000499788.1;transl_table=11 NZ_CP010441.1 RefSeq gene 42283 42726 . - . ID=gene40;Name=SH03_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00205;old_locus_tag=SH03_00205 NZ_CP010441.1 Protein Homology CDS 42283 42726 . - 0 ID=cds40;Parent=gene40;Dbxref=Genbank:WP_000763724.1;Name=WP_000763724.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=protein MioC;protein_id=WP_000763724.1;transl_table=11 NZ_CP010441.1 RefSeq gene 42816 43274 . - . ID=gene41;Name=SH03_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00210;old_locus_tag=SH03_00210 NZ_CP010441.1 Protein Homology CDS 42816 43274 . - 0 ID=cds41;Parent=gene41;Dbxref=Genbank:WP_000432970.1;Name=WP_000432970.1;Note=transcriptional repressor of asnA which codes for aspartate-ammonia ligase;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=WP_000432970.1;transl_table=11 NZ_CP010441.1 RefSeq gene 43426 44418 . + . ID=gene42;Name=SH03_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00215;old_locus_tag=SH03_00215 NZ_CP010441.1 Protein Homology CDS 43426 44418 . + 0 ID=cds42;Parent=gene42;Dbxref=Genbank:WP_000845104.1;Name=WP_000845104.1;Note=catalyzes the formation of asparagine from aspartate and ammonia;gbkey=CDS;product=aspartate--ammonia ligase;protein_id=WP_000845104.1;transl_table=11 NZ_CP010441.1 RefSeq gene 44423 45874 . - . ID=gene43;Name=SH03_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00220;old_locus_tag=SH03_00220 NZ_CP010441.1 Protein Homology CDS 44423 45874 . - 0 ID=cds43;Parent=gene43;Dbxref=Genbank:WP_000956642.1;Name=WP_000956642.1;Note=contains a von Willibrand factor type A domain%3B stimulates the ATPase activity of RavA;gbkey=CDS;product=protein ViaA;protein_id=WP_000956642.1;transl_table=11 NZ_CP010441.1 RefSeq gene 45868 47364 . - . ID=gene44;Name=SH03_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00225;old_locus_tag=SH03_00225 NZ_CP010441.1 Protein Homology CDS 45868 47364 . - 0 ID=cds44;Parent=gene44;Dbxref=Genbank:WP_001299914.1;Name=WP_001299914.1;Note=interacts with LdcI%2C lysine decarboxylase%3B may be active in late log/ early stationary phase;gbkey=CDS;product=ATPase RavA;protein_id=WP_001299914.1;transl_table=11 NZ_CP010441.1 RefSeq gene 47587 49455 . + . ID=gene45;Name=trkD;gbkey=Gene;gene=trkD;gene_biotype=protein_coding;locus_tag=SH03_RS00230;old_locus_tag=SH03_00230 NZ_CP010441.1 Protein Homology CDS 47587 49455 . + 0 ID=cds45;Parent=gene45;Dbxref=Genbank:WP_000102319.1;Name=WP_000102319.1;Note=Responsible for the low-affinity transport of potassium into the cell%3B involved in potassium ion uptake under hyper-osmotic stress at a low pH;gbkey=CDS;gene=trkD;product=low affinity potassium transport system protein kup;protein_id=WP_000102319.1;transl_table=11 NZ_CP010441.1 RefSeq gene 49622 50041 . + . ID=gene46;Name=SH03_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00235;old_locus_tag=SH03_00235 NZ_CP010441.1 Protein Homology CDS 49622 50041 . + 0 ID=cds46;Parent=gene46;Dbxref=Genbank:WP_001301979.1;Name=WP_001301979.1;Note=cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose%3B RbsD is required for efficient ribose utilization in E. coli%3B rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source;gbkey=CDS;product=D-ribose pyranase;protein_id=WP_001301979.1;transl_table=11 NZ_CP010441.1 RefSeq gene 50049 51554 . + . ID=gene47;Name=SH03_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00240;old_locus_tag=SH03_00240 NZ_CP010441.1 Protein Homology CDS 50049 51554 . + 0 ID=cds47;Parent=gene47;Dbxref=Genbank:WP_000387770.1;Name=WP_000387770.1;gbkey=CDS;product=ribose import ATP-binding protein RbsA;protein_id=WP_000387770.1;transl_table=11 NZ_CP010441.1 RefSeq gene 51559 52524 . + . ID=gene48;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=SH03_RS00245;old_locus_tag=SH03_00245 NZ_CP010441.1 Protein Homology CDS 51559 52524 . + 0 ID=cds48;Parent=gene48;Dbxref=Genbank:WP_000211858.1;Name=WP_000211858.1;Note=functions to transport ribose at high affinity%3B forms a complex with RbsA2C2B;gbkey=CDS;gene=rbsC;product=ribose ABC transporter permease;protein_id=WP_000211858.1;transl_table=11 NZ_CP010441.1 RefSeq gene 52549 53439 . + . ID=gene49;Name=SH03_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00250;old_locus_tag=SH03_00250 NZ_CP010441.1 Protein Homology CDS 52549 53439 . + 0 ID=cds49;Parent=gene49;Dbxref=Genbank:WP_001056271.1;Name=WP_001056271.1;Note=periplasmic substrate-binding component of the ATP-dependent ribose transport system;gbkey=CDS;product=D-ribose-binding periplasmic protein;protein_id=WP_001056271.1;transl_table=11 NZ_CP010441.1 RefSeq gene 53565 54494 . + . ID=gene50;Name=SH03_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00255;old_locus_tag=SH03_00255 NZ_CP010441.1 Protein Homology CDS 53565 54494 . + 0 ID=cds50;Parent=gene50;Dbxref=Genbank:WP_001300603.1;Name=WP_001300603.1;Note=catalyzes the formation of D-ribose 5-phosphate from ribose;gbkey=CDS;product=ribokinase;protein_id=WP_001300603.1;transl_table=11 NZ_CP010441.1 RefSeq gene 54507 55490 . + . ID=gene51;Name=SH03_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00260;old_locus_tag=SH03_00260 NZ_CP010441.1 Protein Homology CDS 54507 55490 . + 0 ID=cds51;Parent=gene51;Dbxref=Genbank:WP_001296587.1;Name=WP_001296587.1;Note=binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis%3B is involved in regulation of purB%2C purC%2C purEK%2C purHD%2C purL%2C purMN and guaBA expression%3B binds hypoxanthine and guanine as inducers;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_001296587.1;transl_table=11 NZ_CP010441.1 RefSeq gene 55456 56883 . - . ID=gene52;Name=SH03_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00265;old_locus_tag=SH03_00265 NZ_CP010441.1 Protein Homology CDS 55456 56883 . - 0 ID=cds52;Parent=gene52;Dbxref=Genbank:WP_001280852.1;Name=WP_001280852.1;gbkey=CDS;product=transporter HsrA;protein_id=WP_001280852.1;transl_table=11 NZ_CP010441.1 RefSeq gene 56906 57598 . - . ID=gene53;Name=SH03_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00270;old_locus_tag=SH03_00270 NZ_CP010441.1 Protein Homology CDS 56906 57598 . - 0 ID=cds53;Parent=gene53;Dbxref=Genbank:WP_001131164.1;Name=WP_001131164.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001131164.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 57713 63220 . + . ID=id1;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 58077 59632 . + . ID=gene54;Name=SH03_RS00275;gbkey=Gene;gene_biotype=rRNA;locus_tag=SH03_RS00275;old_locus_tag=SH03_00275 NZ_CP010441.1 RefSeq rRNA 58077 59632 . + . ID=rna0;Parent=gene54;gbkey=rRNA;product=16S ribosomal RNA NZ_CP010441.1 RefSeq exon 58077 59632 . + . ID=id2;Parent=rna0;gbkey=rRNA;product=16S ribosomal RNA NZ_CP010441.1 RefSeq gene 59706 59781 . + . ID=gene55;Name=SH03_RS00280;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS00280;old_locus_tag=SH03_00280 NZ_CP010441.1 tRNAscan-SE tRNA 59706 59781 . + . ID=rna1;Parent=gene55;anticodon=(pos:59740..59742);gbkey=tRNA;product=tRNA-Glu NZ_CP010441.1 tRNAscan-SE exon 59706 59781 . + . ID=id3;Parent=rna1;anticodon=(pos:59740..59742);gbkey=tRNA;product=tRNA-Glu NZ_CP010441.1 RefSeq gene 59966 62890 . + . ID=gene56;Name=SH03_RS00285;gbkey=Gene;gene_biotype=rRNA;locus_tag=SH03_RS00285;old_locus_tag=SH03_00285 NZ_CP010441.1 RefSeq rRNA 59966 62890 . + . ID=rna2;Parent=gene56;gbkey=rRNA;product=23S ribosomal RNA NZ_CP010441.1 RefSeq exon 59966 62890 . + . ID=id4;Parent=rna2;gbkey=rRNA;product=23S ribosomal RNA NZ_CP010441.1 RefSeq gene 62973 63088 . + . ID=gene57;Name=SH03_RS00290;gbkey=Gene;gene_biotype=rRNA;locus_tag=SH03_RS00290;old_locus_tag=SH03_00290 NZ_CP010441.1 cmsearch rRNA 62973 63088 . + . ID=rna3;Parent=gene57;gbkey=rRNA;product=5S ribosomal RNA NZ_CP010441.1 cmsearch exon 62973 63088 . + . ID=id5;Parent=rna3;gbkey=rRNA;product=5S ribosomal RNA NZ_CP010441.1 RefSeq gene 63143 63219 . + . ID=gene58;Name=SH03_RS00295;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS00295;old_locus_tag=SH03_00295 NZ_CP010441.1 tRNAscan-SE tRNA 63143 63219 . + . ID=rna4;Parent=gene58;anticodon=(pos:63177..63179);gbkey=tRNA;product=tRNA-Asp NZ_CP010441.1 tRNAscan-SE exon 63143 63219 . + . ID=id6;Parent=rna4;anticodon=(pos:63177..63179);gbkey=tRNA;product=tRNA-Asp NZ_CP010441.1 RefSeq gene 63228 63303 . + . ID=gene59;Name=SH03_RS00300;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS00300;old_locus_tag=SH03_00300 NZ_CP010441.1 tRNAscan-SE tRNA 63228 63303 . + . ID=rna5;Parent=gene59;anticodon=(pos:63261..63263);gbkey=tRNA;product=tRNA-Trp NZ_CP010441.1 tRNAscan-SE exon 63228 63303 . + . ID=id7;Parent=rna5;anticodon=(pos:63261..63263);gbkey=tRNA;product=tRNA-Trp NZ_CP010441.1 RefSeq gene 63399 64238 . - . ID=gene60;Name=SH03_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00305;old_locus_tag=SH03_00305 NZ_CP010441.1 Protein Homology CDS 63399 64238 . - 0 ID=cds54;Parent=gene60;Dbxref=Genbank:WP_000379245.1;Name=WP_000379245.1;Note=Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000379245.1;transl_table=11 NZ_CP010441.1 RefSeq gene 64357 64695 . + . ID=gene61;Name=SH03_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00310;old_locus_tag=SH03_00310 NZ_CP010441.1 Protein Homology CDS 64357 64695 . + 0 ID=cds55;Parent=gene61;Dbxref=Genbank:WP_000841001.1;Name=WP_000841001.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000841001.1;transl_table=11 NZ_CP010441.1 RefSeq gene 64720 66240 . - . ID=gene62;Name=SH03_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00315;old_locus_tag=SH03_00315 NZ_CP010441.1 Protein Homology CDS 64720 66240 . - 0 ID=cds56;Parent=gene62;Dbxref=Genbank:WP_000058964.1;Name=WP_000058964.1;Note=among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function;gbkey=CDS;product=magnesium chelatase and transcriptional regulator;protein_id=WP_000058964.1;transl_table=11 NZ_CP010441.1 RefSeq gene 66593 66691 . + . ID=gene63;Name=SH03_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00320;old_locus_tag=SH03_00320 NZ_CP010441.1 Protein Homology CDS 66593 66691 . + 0 ID=cds57;Parent=gene63;Dbxref=Genbank:WP_001311244.1;Name=WP_001311244.1;gbkey=CDS;product=IlvGMEDA operon leader peptide;protein_id=WP_001311244.1;transl_table=11 NZ_CP010441.1 RefSeq gene 66831 68475 . + . ID=gene64;Name=SH03_RS00325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS00325;pseudo=true NZ_CP010441.1 Protein Homology CDS 66831 68475 . + 0 ID=cds58;Parent=gene64;Note=catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit;exception=annotated by transcript or proteomic data;gbkey=CDS;product=acetolactate synthase catalytic subunit;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 68472 68735 . + . ID=gene65;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=SH03_RS00330;old_locus_tag=SH03_00330 NZ_CP010441.1 Protein Homology CDS 68472 68735 . + 0 ID=cds59;Parent=gene65;Dbxref=Genbank:WP_000983255.1;Name=WP_000983255.1;gbkey=CDS;gene=ilvM;product=acetolactate synthase isozyme 2 small subunit;protein_id=WP_000983255.1;transl_table=11 NZ_CP010441.1 RefSeq gene 68755 69684 . + . ID=gene66;Name=SH03_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00335;old_locus_tag=SH03_00335 NZ_CP010441.1 Protein Homology CDS 68755 69684 . + 0 ID=cds60;Parent=gene66;Dbxref=Genbank:WP_000208520.1;Name=WP_000208520.1;gbkey=CDS;product=branched-chain-amino-acid aminotransferase;protein_id=WP_000208520.1;transl_table=11 NZ_CP010441.1 RefSeq gene 69749 71599 . + . ID=gene67;Name=SH03_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00340;old_locus_tag=SH03_00340 NZ_CP010441.1 Protein Homology CDS 69749 71599 . + 0 ID=cds61;Parent=gene67;Dbxref=Genbank:WP_001127399.1;Name=WP_001127399.1;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;product=dihydroxy-acid dehydratase;protein_id=WP_001127399.1;transl_table=11 NZ_CP010441.1 RefSeq gene 71602 73146 . + . ID=gene68;Name=SH03_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00345;old_locus_tag=SH03_00345 NZ_CP010441.1 Protein Homology CDS 71602 73146 . + 0 ID=cds62;Parent=gene68;Dbxref=Genbank:WP_000785596.1;Name=WP_000785596.1;Note=threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway;gbkey=CDS;product=L-threonine dehydratase biosynthetic IlvA;protein_id=WP_000785596.1;transl_table=11 NZ_CP010441.1 RefSeq gene 73198 74091 . - . ID=gene69;Name=SH03_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00350;old_locus_tag=SH03_00350 NZ_CP010441.1 Protein Homology CDS 73198 74091 . - 0 ID=cds63;Parent=gene69;Dbxref=Genbank:WP_000365791.1;Name=WP_000365791.1;Note=participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000365791.1;transl_table=11 NZ_CP010441.1 RefSeq gene 74241 75716 . + . ID=gene70;Name=SH03_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00355;old_locus_tag=SH03_00355 NZ_CP010441.1 Protein Homology CDS 74241 75716 . + 0 ID=cds64;Parent=gene70;Dbxref=Genbank:WP_000024939.1;Name=WP_000024939.1;Note=catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;product=ketol-acid reductoisomerase;protein_id=WP_000024939.1;transl_table=11 NZ_CP010441.1 RefSeq gene 75803 76084 . - . ID=gene71;Name=SH03_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00360;old_locus_tag=SH03_00360 NZ_CP010441.1 Protein Homology CDS 75803 76084 . - 0 ID=cds65;Parent=gene71;Dbxref=Genbank:WP_001140251.1;Name=WP_001140251.1;Note=rotamase C%3B accelerates isomerization of the peptidyl prolyl bond;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_001140251.1;transl_table=11 NZ_CP010441.1 RefSeq gene 76283 76731 . - . ID=gene72;Name=SH03_RS00365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS00365;pseudo=true NZ_CP010441.1 Protein Homology CDS 76283 76731 . - 0 ID=cds66;Parent=gene72;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 76948 78969 . + . ID=gene73;Name=SH03_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00370;old_locus_tag=SH03_00370 NZ_CP010441.1 Protein Homology CDS 76948 78969 . + 0 ID=cds67;Parent=gene73;Dbxref=Genbank:WP_038432713.1;Name=WP_038432713.1;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication;gbkey=CDS;product=ATP-dependent DNA helicase Rep;protein_id=WP_038432713.1;transl_table=11 NZ_CP010441.1 RefSeq gene 79016 80500 . - . ID=gene74;Name=SH03_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00375;old_locus_tag=SH03_00375 NZ_CP010441.1 Protein Homology CDS 79016 80500 . - 0 ID=cds68;Parent=gene74;Dbxref=Genbank:WP_001295254.1;Name=WP_001295254.1;Note=catalyzes the conversion of guanosine 5'-triphosphate%2C3'-diphosphate (pppGpp) to guanosine 5'-diphosphate%2C3'-diphosphate (ppGpp)%3B pppGpp and ppGpp control the stringent response during amino acid starvation;gbkey=CDS;product=guanosine-5'-triphosphate%2C3'-diphosphate pyrophosphatase;protein_id=WP_001295254.1;transl_table=11 NZ_CP010441.1 RefSeq gene 80636 81901 . - . ID=gene75;Name=SH03_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00380;old_locus_tag=SH03_00380 NZ_CP010441.1 Protein Homology CDS 80636 81901 . - 0 ID=cds69;Parent=gene75;Dbxref=Genbank:WP_038432715.1;Name=WP_038432715.1;Note=enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome%2C a multi-enzyme complex important in RNA processing and messenger RNA degradation;gbkey=CDS;product=ATP-dependent RNA helicase RhlB;protein_id=WP_038432715.1;transl_table=11 NZ_CP010441.1 RefSeq gene 82032 82361 . + . ID=gene76;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=SH03_RS00385;old_locus_tag=SH03_00385 NZ_CP010441.1 Protein Homology CDS 82032 82361 . + 0 ID=cds70;Parent=gene76;Dbxref=Genbank:WP_001280776.1;Name=WP_001280776.1;gbkey=CDS;gene=trxA;product=thioredoxin;protein_id=WP_001280776.1;transl_table=11 NZ_CP010441.1 RefSeq gene 82502 82603 . + . ID=gene77;Name=SH03_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00390;old_locus_tag=SH03_00390 NZ_CP010441.1 Protein Homology CDS 82502 82603 . + 0 ID=cds71;Parent=gene77;Dbxref=Genbank:WP_001295255.1;Name=WP_001295255.1;gbkey=CDS;product=rho operon leader peptide;protein_id=WP_001295255.1;transl_table=11 NZ_CP010441.1 RefSeq gene 82688 83947 . + . ID=gene78;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=SH03_RS00395;old_locus_tag=SH03_00395 NZ_CP010441.1 Protein Homology CDS 82688 83947 . + 0 ID=cds72;Parent=gene78;Dbxref=Genbank:WP_001054527.1;Name=WP_001054527.1;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;gbkey=CDS;gene=rho;product=transcription termination factor Rho;protein_id=WP_001054527.1;transl_table=11 NZ_CP010441.1 RefSeq gene 83957 84175 . + . ID=gene79;Name=SH03_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00400;old_locus_tag=SH03_00400 NZ_CP010441.1 Protein Homology CDS 83957 84175 . + 0 ID=cds73;Parent=gene79;Dbxref=Genbank:WP_001127071.1;Name=WP_001127071.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001127071.1;transl_table=11 NZ_CP010441.1 RefSeq gene 84187 85290 . + . ID=gene80;Name=SH03_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00405;old_locus_tag=SH03_00405 NZ_CP010441.1 Protein Homology CDS 84187 85290 . + 0 ID=cds74;Parent=gene80;Dbxref=Genbank:WP_038432717.1;Name=WP_038432717.1;Note=catalyzes the formation of alpha-N-acetylglucosaminyl-pyrophosphoryl-undecaprenyl from alpha-N-acetylglucosaminyl 1-phosphate and the lipid carrier undecaprenyl phosphate;gbkey=CDS;product=undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase;protein_id=WP_038432717.1;transl_table=11 NZ_CP010441.1 RefSeq gene 85302 86348 . + . ID=gene81;Name=SH03_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00410;old_locus_tag=SH03_00410 NZ_CP010441.1 Protein Homology CDS 85302 86348 . + 0 ID=cds75;Parent=gene81;Dbxref=Genbank:WP_038432720.1;Name=WP_038432720.1;Note=Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_038432720.1;transl_table=11 NZ_CP010441.1 RefSeq gene 86449 87534 . + . ID=gene82;Name=SH03_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00415;old_locus_tag=SH03_00415 NZ_CP010441.1 Protein Homology CDS 86449 87534 . + 0 ID=cds76;Parent=gene82;Dbxref=Genbank:WP_001336436.1;Name=WP_001336436.1;gbkey=CDS;product=UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_001336436.1;transl_table=11 NZ_CP010441.1 RefSeq gene 87531 88793 . + . ID=gene83;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=SH03_RS00420;old_locus_tag=SH03_00420 NZ_CP010441.1 Protein Homology CDS 87531 88793 . + 0 ID=cds77;Parent=gene83;Dbxref=Genbank:WP_000006621.1;Name=WP_000006621.1;Note=catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid;gbkey=CDS;gene=wecC;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_000006621.1;transl_table=11 NZ_CP010441.1 RefSeq gene 88793 89860 . + . ID=gene84;Name=SH03_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00425;old_locus_tag=SH03_00425 NZ_CP010441.1 Protein Homology CDS 88793 89860 . + 0 ID=cds78;Parent=gene84;Dbxref=Genbank:WP_001226601.1;Name=WP_001226601.1;gbkey=CDS;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_001226601.1;transl_table=11 NZ_CP010441.1 RefSeq gene 89879 90760 . + . ID=gene85;Name=SH03_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00430;old_locus_tag=SH03_00430 NZ_CP010441.1 Protein Homology CDS 89879 90760 . + 0 ID=cds79;Parent=gene85;Dbxref=Genbank:WP_000676056.1;Name=WP_000676056.1;gbkey=CDS;product=glucose-1-phosphate thymidylyltransferase 2;protein_id=WP_000676056.1;transl_table=11 NZ_CP010441.1 RefSeq gene 90738 91412 . + . ID=gene86;Name=SH03_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00435;old_locus_tag=SH03_00435 NZ_CP010441.1 Protein Homology CDS 90738 91412 . + 0 ID=cds80;Parent=gene86;Dbxref=Genbank:WP_001145183.1;Name=WP_001145183.1;gbkey=CDS;product=dTDP-fucosamine acetyltransferase;protein_id=WP_001145183.1;transl_table=11 NZ_CP010441.1 RefSeq gene 91417 92547 . + . ID=gene87;Name=SH03_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00440;old_locus_tag=SH03_00440 NZ_CP010441.1 Protein Homology CDS 91417 92547 . + 0 ID=cds81;Parent=gene87;Dbxref=Genbank:WP_000612043.1;Name=WP_000612043.1;Note=catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis;gbkey=CDS;product=dTDP-4-amino-4%2C6-dideoxygalactose aminotransferase;protein_id=WP_000612043.1;transl_table=11 NZ_CP010441.1 RefSeq gene 92549 93799 . + . ID=gene88;Name=SH03_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00445;old_locus_tag=SH03_00445 NZ_CP010441.1 Protein Homology CDS 92549 93799 . + 0 ID=cds82;Parent=gene88;Dbxref=Genbank:WP_000050265.1;Name=WP_000050265.1;Note=involved in the movement of lipid III across the membrane;gbkey=CDS;product=protein WzxE;protein_id=WP_000050265.1;transl_table=11 NZ_CP010441.1 RefSeq gene 93796 94875 . + . ID=gene89;Name=SH03_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00450;old_locus_tag=SH03_00450 NZ_CP010441.1 Protein Homology CDS 93796 94875 . + 0 ID=cds83;Parent=gene89;Dbxref=Genbank:WP_000217234.1;Name=WP_000217234.1;Note=catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis;gbkey=CDS;product=TDP-N-acetylfucosamine--lipid II N-acetylfucosaminyltransferase;protein_id=WP_000217234.1;transl_table=11 NZ_CP010441.1 RefSeq gene 94872 96224 . + . ID=gene90;Name=SH03_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00455;old_locus_tag=SH03_00455 NZ_CP010441.1 Protein Homology CDS 94872 96224 . + 0 ID=cds84;Parent=gene90;Dbxref=Genbank:WP_000055129.1;Name=WP_000055129.1;Note=enterobacterial common antigen polymerase;gbkey=CDS;product=ECA polysaccharide chain elongation protein;protein_id=WP_000055129.1;transl_table=11 NZ_CP010441.1 RefSeq gene 96227 96967 . + . ID=gene91;Name=SH03_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00460;old_locus_tag=SH03_00460 NZ_CP010441.1 Protein Homology CDS 96227 96967 . + 0 ID=cds85;Parent=gene91;Dbxref=Genbank:WP_001064040.1;Name=WP_001064040.1;gbkey=CDS;product=UDP-N-acetyl-D-mannosaminuronic acid transferase;protein_id=WP_001064040.1;transl_table=11 NZ_CP010441.1 RefSeq gene 97158 98543 . + . ID=gene92;Name=SH03_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00465;old_locus_tag=SH03_00465 NZ_CP010441.1 Protein Homology CDS 97158 98543 . + 0 ID=cds86;Parent=gene92;Dbxref=Genbank:WP_000774731.1;Name=WP_000774731.1;Note=involved in the transport across the cytoplasmic membrane of D-alanine%2C D-serine and glycine;gbkey=CDS;product=transporter;protein_id=WP_000774731.1;transl_table=11 NZ_CP010441.1 RefSeq gene 98646 98722 . + . ID=gene93;Name=SH03_RS00470;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS00470;old_locus_tag=SH03_00470 NZ_CP010441.1 tRNAscan-SE tRNA 98646 98722 . + . ID=rna6;Parent=gene93;anticodon=(pos:98680..98682);gbkey=tRNA;product=tRNA-Arg NZ_CP010441.1 tRNAscan-SE exon 98646 98722 . + . ID=id8;Parent=rna6;anticodon=(pos:98680..98682);gbkey=tRNA;product=tRNA-Arg NZ_CP010441.1 RefSeq gene 98781 98856 . + . ID=gene94;Name=SH03_RS00475;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS00475;old_locus_tag=SH03_00475 NZ_CP010441.1 tRNAscan-SE tRNA 98781 98856 . + . ID=rna7;Parent=gene94;anticodon=(pos:98814..98816);gbkey=tRNA;product=tRNA-His NZ_CP010441.1 tRNAscan-SE exon 98781 98856 . + . ID=id9;Parent=rna7;anticodon=(pos:98814..98816);gbkey=tRNA;product=tRNA-His NZ_CP010441.1 RefSeq gene 98877 98963 . + . ID=gene95;Name=SH03_RS00480;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS00480;old_locus_tag=SH03_00480 NZ_CP010441.1 tRNAscan-SE tRNA 98877 98963 . + . ID=rna8;Parent=gene95;anticodon=(pos:98911..98913);gbkey=tRNA;product=tRNA-Leu NZ_CP010441.1 tRNAscan-SE exon 98877 98963 . + . ID=id10;Parent=rna8;anticodon=(pos:98911..98913);gbkey=tRNA;product=tRNA-Leu NZ_CP010441.1 RefSeq gene 99006 99082 . + . ID=gene96;Name=SH03_RS00485;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS00485;old_locus_tag=SH03_00485 NZ_CP010441.1 tRNAscan-SE tRNA 99006 99082 . + . ID=rna9;Parent=gene96;anticodon=(pos:99040..99042);gbkey=tRNA;product=tRNA-Pro NZ_CP010441.1 tRNAscan-SE exon 99006 99082 . + . ID=id11;Parent=rna9;anticodon=(pos:99040..99042);gbkey=tRNA;product=tRNA-Pro NZ_CP010441.1 RefSeq gene 99229 100464 . + . ID=gene97;Name=SH03_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00490;old_locus_tag=SH03_00490 NZ_CP010441.1 Protein Homology CDS 99229 100464 . + 0 ID=cds87;Parent=gene97;Dbxref=Genbank:WP_000941517.1;Name=WP_000941517.1;gbkey=CDS;product=anaerobic sulfatase maturase AslB;protein_id=WP_000941517.1;transl_table=11 NZ_CP010441.1 RefSeq gene 100623 102278 . - . ID=gene98;Name=SH03_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00495;old_locus_tag=SH03_00495 NZ_CP010441.1 Protein Homology CDS 100623 102278 . - 0 ID=cds88;Parent=gene98;Dbxref=Genbank:WP_000395863.1;Name=WP_000395863.1;gbkey=CDS;product=arylsulfatase;protein_id=WP_000395863.1;transl_table=11 NZ_CP010441.1 RefSeq gene 102957 104153 . - . ID=gene99;Name=SH03_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00500;old_locus_tag=SH03_00500 NZ_CP010441.1 Protein Homology CDS 102957 104153 . - 0 ID=cds89;Parent=gene99;Dbxref=Genbank:WP_000921791.1;Name=WP_000921791.1;gbkey=CDS;product=heme biosynthesis protein HemY;protein_id=WP_000921791.1;transl_table=11 NZ_CP010441.1 RefSeq gene 104156 105337 . - . ID=gene100;Name=SH03_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00505;old_locus_tag=SH03_00505 NZ_CP010441.1 Protein Homology CDS 104156 105337 . - 0 ID=cds90;Parent=gene100;Dbxref=Genbank:WP_000138997.1;Name=WP_000138997.1;gbkey=CDS;product=heme biosynthesis operon protein HemX;protein_id=WP_000138997.1;transl_table=11 NZ_CP010441.1 RefSeq gene 105359 106099 . - . ID=gene101;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=SH03_RS00510;old_locus_tag=SH03_00510 NZ_CP010441.1 Protein Homology CDS 105359 106099 . - 0 ID=cds91;Parent=gene101;Dbxref=Genbank:WP_000026046.1;Name=WP_000026046.1;Note=catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane%3B functions in tetrapyrrole and heme biosynthesis;gbkey=CDS;gene=hemD;product=uroporphyrinogen III methyltransferase;protein_id=WP_000026046.1;transl_table=11 NZ_CP010441.1 RefSeq gene 106096 107037 . - . ID=gene102;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=SH03_RS00515;old_locus_tag=SH03_00515 NZ_CP010441.1 Protein Homology CDS 106096 107037 . - 0 ID=cds92;Parent=gene102;Dbxref=Genbank:WP_001338644.1;Name=WP_001338644.1;Note=transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis;gbkey=CDS;gene=hemC;product=porphobilinogen deaminase;protein_id=WP_001338644.1;transl_table=11 NZ_CP010441.1 RefSeq gene 107424 109970 . + . ID=gene103;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=SH03_RS00520;old_locus_tag=SH03_00520 NZ_CP010441.1 Protein Homology CDS 107424 109970 . + 0 ID=cds93;Parent=gene103;Dbxref=Genbank:WP_000281668.1;Name=WP_000281668.1;Note=catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP;gbkey=CDS;gene=cyaA;product=adenylate cyclase;protein_id=WP_000281668.1;transl_table=11 NZ_CP010441.1 RefSeq gene 110010 110330 . - . ID=gene104;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=SH03_RS00525;old_locus_tag=SH03_00525 NZ_CP010441.1 Protein Homology CDS 110010 110330 . - 0 ID=cds94;Parent=gene104;Dbxref=Genbank:WP_000999947.1;Name=WP_000999947.1;Note=iron-dependent inhibitor of iron-sulfur cluster formation%3B iron-binding and oxidizing protein%3B defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease%3B based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly;gbkey=CDS;gene=cyaY;product=protein CyaY;protein_id=WP_000999947.1;transl_table=11 NZ_CP010441.1 RefSeq gene 110793 110996 . + . ID=gene105;Name=SH03_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00530;old_locus_tag=SH03_00530 NZ_CP010441.1 Protein Homology CDS 110793 110996 . + 0 ID=cds95;Parent=gene105;Dbxref=Genbank:WP_000799889.1;Name=WP_000799889.1;gbkey=CDS;product=membrane protein;protein_id=WP_000799889.1;transl_table=11 NZ_CP010441.1 RefSeq gene 111033 111857 . + . ID=gene106;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=SH03_RS00535;old_locus_tag=SH03_00535 NZ_CP010441.1 Protein Homology CDS 111033 111857 . + 0 ID=cds96;Parent=gene106;Dbxref=Genbank:WP_001160654.1;Name=WP_001160654.1;Note=involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate;gbkey=CDS;gene=dapF;product=diaminopimelate epimerase;protein_id=WP_001160654.1;transl_table=11 NZ_CP010441.1 RefSeq gene 111854 112561 . + . ID=gene107;Name=SH03_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00540;old_locus_tag=SH03_00540 NZ_CP010441.1 Protein Homology CDS 111854 112561 . + 0 ID=cds97;Parent=gene107;Dbxref=Genbank:WP_000812796.1;Name=WP_000812796.1;gbkey=CDS;product=DUF484 domain-containing protein;protein_id=WP_000812796.1;transl_table=11 NZ_CP010441.1 RefSeq gene 112558 113454 . + . ID=gene108;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=SH03_RS00545;old_locus_tag=SH03_00545 NZ_CP010441.1 Protein Homology CDS 112558 113454 . + 0 ID=cds98;Parent=gene108;Dbxref=Genbank:WP_000130691.1;Name=WP_000130691.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerC;product=tyrosine recombinase XerC;protein_id=WP_000130691.1;transl_table=11 NZ_CP010441.1 RefSeq gene 113454 114170 . + . ID=gene109;Name=SH03_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00550;old_locus_tag=SH03_00550 NZ_CP010441.1 Protein Homology CDS 113454 114170 . + 0 ID=cds99;Parent=gene109;Dbxref=Genbank:WP_001213584.1;Name=WP_001213584.1;Note=YigB%3B member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein%3B unknown function;gbkey=CDS;product=flavin mononucleotide phosphatase YigB;protein_id=WP_001213584.1;transl_table=11 NZ_CP010441.1 RefSeq gene 114254 116416 . + . ID=gene110;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;locus_tag=SH03_RS00555;old_locus_tag=SH03_00555 NZ_CP010441.1 Protein Homology CDS 114254 116416 . + 0 ID=cds100;Parent=gene110;Dbxref=Genbank:WP_000383406.1;Name=WP_000383406.1;Note=unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.;gbkey=CDS;gene=uvrD;product=DNA helicase II;protein_id=WP_000383406.1;transl_table=11 NZ_CP010441.1 RefSeq gene 116563 117327 . - . ID=gene111;Name=SH03_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00560;old_locus_tag=SH03_00560 NZ_CP010441.1 Protein Homology CDS 116563 117327 . - 0 ID=cds101;Parent=gene111;Dbxref=Genbank:WP_000951133.1;Name=WP_000951133.1;gbkey=CDS;product=DUF2233 domain-containing protein;protein_id=WP_000951133.1;transl_table=11 NZ_CP010441.1 RefSeq gene 117340 117453 . + . ID=gene112;Name=SH03_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00565;old_locus_tag=SH03_00565 NZ_CP010441.1 Protein Homology CDS 117340 117453 . + 0 ID=cds102;Parent=gene112;Dbxref=Genbank:WP_000263457.1;Name=WP_000263457.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000263457.1;transl_table=11 NZ_CP010441.1 RefSeq gene 117697 118647 . + . ID=gene113;Name=SH03_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00570;old_locus_tag=SH03_00570 NZ_CP010441.1 Protein Homology CDS 117697 118647 . + 0 ID=cds103;Parent=gene113;Dbxref=Genbank:WP_000947159.1;Name=WP_000947159.1;Note=responsible for the influx of magnesium ions;gbkey=CDS;product=magnesium transporter CorA;protein_id=WP_000947159.1;transl_table=11 NZ_CP010441.1 RefSeq gene 118690 119070 . - . ID=gene114;Name=SH03_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00575;old_locus_tag=SH03_00575 NZ_CP010441.1 Protein Homology CDS 118690 119070 . - 0 ID=cds104;Parent=gene114;Dbxref=Genbank:WP_000032581.1;Name=WP_000032581.1;gbkey=CDS;product=DUF2628 domain-containing protein;protein_id=WP_000032581.1;transl_table=11 NZ_CP010441.1 RefSeq gene 119084 119464 . - . ID=gene115;Name=SH03_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00580;old_locus_tag=SH03_00580 NZ_CP010441.1 Protein Homology CDS 119084 119464 . - 0 ID=cds105;Parent=gene115;Dbxref=Genbank:WP_000944218.1;Name=WP_000944218.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000944218.1;transl_table=11 NZ_CP010441.1 RefSeq gene 119559 120449 . - . ID=gene116;Name=SH03_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00585;old_locus_tag=SH03_00585 NZ_CP010441.1 Protein Homology CDS 119559 120449 . - 0 ID=cds106;Parent=gene116;Dbxref=Genbank:WP_000339104.1;Name=WP_000339104.1;gbkey=CDS;product=protein RarD;protein_id=WP_000339104.1;transl_table=11 NZ_CP010441.1 RefSeq gene 120501 120968 . - . ID=gene117;Name=SH03_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00590;old_locus_tag=SH03_00590 NZ_CP010441.1 Protein Homology CDS 120501 120968 . - 0 ID=cds107;Parent=gene117;Dbxref=Genbank:WP_001277142.1;Name=WP_001277142.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001277142.1;transl_table=11 NZ_CP010441.1 RefSeq gene 121133 122002 . + . ID=gene118;Name=SH03_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00595;old_locus_tag=SH03_00595 NZ_CP010441.1 Protein Homology CDS 121133 122002 . + 0 ID=cds108;Parent=gene118;Dbxref=Genbank:WP_001259700.1;Name=WP_001259700.1;Note=catalyzes the hydrolysis of phosphatidylcholine;gbkey=CDS;product=phospholipase A1;protein_id=WP_001259700.1;transl_table=11 NZ_CP010441.1 RefSeq gene 122135 123964 . + . ID=gene119;Name=SH03_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00600;old_locus_tag=SH03_00600 NZ_CP010441.1 Protein Homology CDS 122135 123964 . + 0 ID=cds109;Parent=gene119;Dbxref=Genbank:WP_000035581.1;Name=WP_000035581.1;Note=functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway;gbkey=CDS;product=ATP-dependent DNA helicase RecQ;protein_id=WP_000035581.1;transl_table=11 NZ_CP010441.1 RefSeq gene 124028 124648 . + . ID=gene120;Name=SH03_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00605;old_locus_tag=SH03_00605 NZ_CP010441.1 Protein Homology CDS 124028 124648 . + 0 ID=cds110;Parent=gene120;Dbxref=Genbank:WP_000928824.1;Name=WP_000928824.1;gbkey=CDS;product=threonine efflux protein;protein_id=WP_000928824.1;transl_table=11 NZ_CP010441.1 RefSeq gene 124710 125330 . - . ID=gene121;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=SH03_RS00610;old_locus_tag=SH03_00610 NZ_CP010441.1 Protein Homology CDS 124710 125330 . - 0 ID=cds111;Parent=gene121;Dbxref=Genbank:WP_000171710.1;Name=WP_000171710.1;gbkey=CDS;gene=rhtB;product=homoserine/homoserine lactone efflux protein;protein_id=WP_000171710.1;transl_table=11 NZ_CP010441.1 RefSeq gene 125441 126463 . + . ID=gene122;Name=SH03_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00615;old_locus_tag=SH03_00615 NZ_CP010441.1 Protein Homology CDS 125441 126463 . + 0 ID=cds112;Parent=gene122;Dbxref=Genbank:WP_000487654.1;Name=WP_000487654.1;Note=lecithinase B%3B catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine%3B can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates;gbkey=CDS;product=lysophospholipase L2;protein_id=WP_000487654.1;transl_table=11 NZ_CP010441.1 RefSeq gene 126471 127271 . + . ID=gene123;Name=SH03_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00620;old_locus_tag=SH03_00620 NZ_CP010441.1 Protein Homology CDS 126471 127271 . + 0 ID=cds113;Parent=gene123;Dbxref=Genbank:WP_000285362.1;Name=WP_000285362.1;gbkey=CDS;product=pyridoxal phosphate phosphatase YigL;protein_id=WP_000285362.1;transl_table=11 NZ_CP010441.1 RefSeq gene 127347 128246 . + . ID=gene124;Name=SH03_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00625;old_locus_tag=SH03_00625 NZ_CP010441.1 Protein Homology CDS 127347 128246 . + 0 ID=cds114;Parent=gene124;Dbxref=Genbank:WP_001196238.1;Name=WP_001196238.1;gbkey=CDS;product=EamA-like transporter;protein_id=WP_001196238.1;transl_table=11 NZ_CP010441.1 RefSeq gene 128134 129087 . - . ID=gene125;Name=SH03_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00630;old_locus_tag=SH03_00630 NZ_CP010441.1 Protein Homology CDS 128134 129087 . - 0 ID=cds115;Parent=gene125;Dbxref=Genbank:WP_000573621.1;Name=WP_000573621.1;Note=homocysteine-binding%3B positive regulator of metA%2C metE and metH;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000573621.1;transl_table=11 NZ_CP010441.1 RefSeq gene 129324 131585 . + . ID=gene126;Name=SH03_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00635;old_locus_tag=SH03_00635 NZ_CP010441.1 Protein Homology CDS 129324 131585 . + 0 ID=cds116;Parent=gene126;Dbxref=Genbank:WP_000153907.1;Name=WP_000153907.1;gbkey=CDS;product=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase;protein_id=WP_000153907.1;transl_table=11 NZ_CP010441.1 RefSeq gene 131625 132440 . - . ID=gene127;Name=SH03_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00640;old_locus_tag=SH03_00640 NZ_CP010441.1 Protein Homology CDS 131625 132440 . - 0 ID=cds117;Parent=gene127;Dbxref=Genbank:WP_001336442.1;Name=WP_001336442.1;gbkey=CDS;product=carboxymethylenebutenolidase;protein_id=WP_001336442.1;transl_table=11 NZ_CP010441.1 RefSeq gene 132702 133463 . + . ID=gene128;Name=SH03_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00645;old_locus_tag=SH03_00645 NZ_CP010441.1 Protein Homology CDS 132702 133463 . + 0 ID=cds118;Parent=gene128;Dbxref=Genbank:WP_000045177.1;Name=WP_000045177.1;Note=catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate%3B involved in the pyrimidine salvage pathway;gbkey=CDS;product=uridine phosphorylase;protein_id=WP_000045177.1;transl_table=11 NZ_CP010441.1 RefSeq gene 133604 135031 . + . ID=gene129;Name=SH03_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00650;old_locus_tag=SH03_00650 NZ_CP010441.1 Protein Homology CDS 133604 135031 . + 0 ID=cds119;Parent=gene129;Dbxref=Genbank:WP_000347714.1;Name=WP_000347714.1;Note=YigN%3B nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence%3B transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner;gbkey=CDS;product=DNA recombination protein RmuC;protein_id=WP_000347714.1;transl_table=11 NZ_CP010441.1 RefSeq gene 135126 135881 . + . ID=gene130;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=SH03_RS00655;old_locus_tag=SH03_00655 NZ_CP010441.1 Protein Homology CDS 135126 135881 . + 0 ID=cds120;Parent=gene130;Dbxref=Genbank:WP_000227958.1;Name=WP_000227958.1;Note=Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone;gbkey=CDS;gene=ubiE;product=ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE;protein_id=WP_000227958.1;transl_table=11 NZ_CP010441.1 RefSeq gene 135895 136500 . + . ID=gene131;Name=SH03_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00660;old_locus_tag=SH03_00660 NZ_CP010441.1 Protein Homology CDS 135895 136500 . + 0 ID=cds121;Parent=gene131;Dbxref=Genbank:WP_001295259.1;Name=WP_001295259.1;gbkey=CDS;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_001295259.1;transl_table=11 NZ_CP010441.1 RefSeq gene 136497 138137 . + . ID=gene132;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;gene_synonym=aarF,yigQ,yigR;locus_tag=SH03_RS00665;old_locus_tag=SH03_00665 NZ_CP010441.1 Protein Homology CDS 136497 138137 . + 0 ID=cds122;Parent=gene132;Dbxref=Genbank:WP_000187530.1;Name=WP_000187530.1;Note=an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions;gbkey=CDS;gene=ubiB;product=hypothetical protein;protein_id=WP_000187530.1;transl_table=11 NZ_CP010441.1 RefSeq gene 138216 138485 . + . ID=gene133;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=SH03_RS00670;old_locus_tag=SH03_00670 NZ_CP010441.1 Protein Homology CDS 138216 138485 . + 0 ID=cds123;Parent=gene133;Dbxref=Genbank:WP_001295260.1;Name=WP_001295260.1;Note=TatA%3B similar to TatE that is found in some proteobacteria%3B part of system that translocates proteins with a conserved twin arginine motif across the inner membrane%3B capable of translocating folded substrates typically those with bound cofactors%3B similar to a protein import system in thylakoid membranes;gbkey=CDS;gene=tatA;product=protein translocase TatA;protein_id=WP_001295260.1;transl_table=11 NZ_CP010441.1 RefSeq gene 138489 139004 . + . ID=gene134;Name=SH03_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00675;old_locus_tag=SH03_00675 NZ_CP010441.1 Protein Homology CDS 138489 139004 . + 0 ID=cds124;Parent=gene134;Dbxref=Genbank:WP_000459594.1;Name=WP_000459594.1;Note=mediates the export of protein precursors bearing twin-arginine signal peptides;gbkey=CDS;product=Sec-independent protein translocase TatB;protein_id=WP_000459594.1;transl_table=11 NZ_CP010441.1 RefSeq gene 139007 139783 . + . ID=gene135;Name=SH03_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00680;old_locus_tag=SH03_00680 NZ_CP010441.1 Protein Homology CDS 139007 139783 . + 0 ID=cds125;Parent=gene135;Dbxref=Genbank:WP_000109943.1;Name=WP_000109943.1;Note=with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane;gbkey=CDS;product=preprotein translocase subunit TatC;protein_id=WP_000109943.1;transl_table=11 NZ_CP010441.1 RefSeq gene 139825 140607 . + . ID=gene136;Name=SH03_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00685;old_locus_tag=SH03_00685 NZ_CP010441.1 Protein Homology CDS 139825 140607 . + 0 ID=cds126;Parent=gene136;Dbxref=Genbank:WP_000459630.1;Name=WP_000459630.1;Note=magnesium dependent%3B involved in quality control of mutated Tat exported substrates%3B not involved in the Sec-independent protein export system;gbkey=CDS;product=Tat-linked quality control protein TatD;protein_id=WP_000459630.1;transl_table=11 NZ_CP010441.1 RefSeq gene 140604 141092 . - . ID=gene137;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=SH03_RS00690;old_locus_tag=SH03_00690 NZ_CP010441.1 Protein Homology CDS 140604 141092 . - 0 ID=cds127;Parent=gene137;Dbxref=Genbank:WP_001192396.1;Name=WP_001192396.1;gbkey=CDS;gene=rfaH;product=transcription antitermination protein RfaH;protein_id=WP_001192396.1;transl_table=11 NZ_CP010441.1 RefSeq gene 141259 142752 . + . ID=gene138;Name=SH03_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00695;old_locus_tag=SH03_00695 NZ_CP010441.1 Protein Homology CDS 141259 142752 . + 0 ID=cds128;Parent=gene138;Dbxref=Genbank:WP_000339804.1;Name=WP_000339804.1;Note=catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=WP_000339804.1;transl_table=11 NZ_CP010441.1 RefSeq gene 142798 143499 . + . ID=gene139;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;gene_synonym=fadI;locus_tag=SH03_RS00700;old_locus_tag=SH03_00700 NZ_CP010441.1 Protein Homology CDS 142798 143499 . + 0 ID=cds129;Parent=gene139;Dbxref=Genbank:WP_000209826.1;Name=WP_000209826.1;Note=NAD(P)H-flavin reductase%3B catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide%3B in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin;gbkey=CDS;gene=fre;product=NAD(P)H-flavin reductase;protein_id=WP_000209826.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 143597 143816 . + . ID=id12;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 143880 145043 . - . ID=gene140;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=SH03_RS00705;old_locus_tag=SH03_00705 NZ_CP010441.1 Protein Homology CDS 143880 145043 . - 0 ID=cds130;Parent=gene140;Dbxref=Genbank:WP_000438725.1;Name=WP_000438725.1;Note=FadA%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadB%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;gbkey=CDS;gene=fadA;product=3-ketoacyl-CoA thiolase;protein_id=WP_000438725.1;transl_table=11 NZ_CP010441.1 RefSeq gene 145053 147242 . - . ID=gene141;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=SH03_RS00710;old_locus_tag=SH03_00710 NZ_CP010441.1 Protein Homology CDS 145053 147242 . - 0 ID=cds131;Parent=gene141;Dbxref=Genbank:WP_000965936.1;Name=WP_000965936.1;Note=includes enoyl-CoA hydratase%2C delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;gbkey=CDS;gene=fadB;product=fatty acid oxidation complex subunit alpha;protein_id=WP_000965936.1;transl_table=11 NZ_CP010441.1 RefSeq gene 147432 148763 . + . ID=gene142;Name=SH03_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00715;old_locus_tag=SH03_00715 NZ_CP010441.1 Protein Homology CDS 147432 148763 . + 0 ID=cds132;Parent=gene142;Dbxref=Genbank:WP_000444561.1;Name=WP_000444561.1;Note=catalyzes the hydrolysis of dipeptides with a proline at the C-terminal%3B also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters;gbkey=CDS;product=Xaa-Pro dipeptidase;protein_id=WP_000444561.1;transl_table=11 NZ_CP010441.1 RefSeq gene 148763 149377 . + . ID=gene143;Name=SH03_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00720;old_locus_tag=SH03_00720 NZ_CP010441.1 Protein Homology CDS 148763 149377 . + 0 ID=cds133;Parent=gene143;Dbxref=Genbank:WP_001308167.1;Name=WP_001308167.1;gbkey=CDS;product=IMPACT family member YigZ;protein_id=WP_001308167.1;transl_table=11 NZ_CP010441.1 RefSeq gene 149416 150867 . + . ID=gene144;Name=SH03_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00725;old_locus_tag=SH03_00725 NZ_CP010441.1 Protein Homology CDS 149416 150867 . + 0 ID=cds134;Parent=gene144;Dbxref=Genbank:WP_000545677.1;Name=WP_000545677.1;gbkey=CDS;product=trk system potassium uptake protein trkH;protein_id=WP_000545677.1;transl_table=11 NZ_CP010441.1 RefSeq gene 150879 151424 . + . ID=gene145;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=SH03_RS00730;old_locus_tag=SH03_00730 NZ_CP010441.1 Protein Homology CDS 150879 151424 . + 0 ID=cds135;Parent=gene145;Dbxref=Genbank:WP_000853959.1;Name=WP_000853959.1;Note=catalyzes the oxidation of protoporphyrinogen IX to form protoporphyrin IX;gbkey=CDS;gene=hemG;product=protoporphyrinogen IX dehydrogenase [menaquinone];protein_id=WP_000853959.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 151436 157116 . + . ID=id13;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 151800 153355 . + . ID=gene146;Name=SH03_RS00735;gbkey=Gene;gene_biotype=rRNA;locus_tag=SH03_RS00735;old_locus_tag=SH03_00735 NZ_CP010441.1 RefSeq rRNA 151800 153355 . + . ID=rna10;Parent=gene146;gbkey=rRNA;product=16S ribosomal RNA NZ_CP010441.1 RefSeq exon 151800 153355 . + . ID=id14;Parent=rna10;gbkey=rRNA;product=16S ribosomal RNA NZ_CP010441.1 RefSeq gene 153412 153488 . + . ID=gene147;Name=SH03_RS00740;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS00740;old_locus_tag=SH03_00740 NZ_CP010441.1 tRNAscan-SE tRNA 153412 153488 . + . ID=rna11;Parent=gene147;anticodon=(pos:153446..153448);gbkey=tRNA;product=tRNA-Ile NZ_CP010441.1 tRNAscan-SE exon 153412 153488 . + . ID=id15;Parent=rna11;anticodon=(pos:153446..153448);gbkey=tRNA;product=tRNA-Ile NZ_CP010441.1 RefSeq gene 153531 153606 . + . ID=gene148;Name=SH03_RS00745;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS00745;old_locus_tag=SH03_00745 NZ_CP010441.1 tRNAscan-SE tRNA 153531 153606 . + . ID=rna12;Parent=gene148;anticodon=(pos:153564..153566);gbkey=tRNA;product=tRNA-Ala NZ_CP010441.1 tRNAscan-SE exon 153531 153606 . + . ID=id16;Parent=rna12;anticodon=(pos:153564..153566);gbkey=tRNA;product=tRNA-Ala NZ_CP010441.1 RefSeq gene 153781 156712 . + . ID=gene149;Name=SH03_RS00750;gbkey=Gene;gene_biotype=rRNA;locus_tag=SH03_RS00750;old_locus_tag=SH03_00750 NZ_CP010441.1 RefSeq rRNA 153781 156712 . + . ID=rna13;Parent=gene149;gbkey=rRNA;product=23S ribosomal RNA NZ_CP010441.1 RefSeq exon 153781 156712 . + . ID=id17;Parent=rna13;gbkey=rRNA;product=23S ribosomal RNA NZ_CP010441.1 RefSeq gene 156790 156905 . + . ID=gene150;Name=SH03_RS00755;gbkey=Gene;gene_biotype=rRNA;locus_tag=SH03_RS00755;old_locus_tag=SH03_00755 NZ_CP010441.1 cmsearch rRNA 156790 156905 . + . ID=rna14;Parent=gene150;gbkey=rRNA;product=5S ribosomal RNA NZ_CP010441.1 cmsearch exon 156790 156905 . + . ID=id18;Parent=rna14;gbkey=rRNA;product=5S ribosomal RNA NZ_CP010441.1 RefSeq gene 157177 157704 . - . ID=gene151;Name=SH03_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00760;old_locus_tag=SH03_00760 NZ_CP010441.1 Protein Homology CDS 157177 157704 . - 0 ID=cds136;Parent=gene151;Dbxref=Genbank:WP_000907622.1;Name=WP_000907622.1;Note=in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway;gbkey=CDS;product=molybdopterin-guanine dinucleotide biosynthesis adapter protein;protein_id=WP_000907622.1;transl_table=11 NZ_CP010441.1 RefSeq gene 157686 158270 . - . ID=gene152;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=SH03_RS00765;old_locus_tag=SH03_00765 NZ_CP010441.1 Protein Homology CDS 157686 158270 . - 0 ID=cds137;Parent=gene152;Dbxref=Genbank:WP_001052181.1;Name=WP_001052181.1;Note=in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mobA;product=molybdenum cofactor guanylyltransferase;protein_id=WP_001052181.1;transl_table=11 NZ_CP010441.1 RefSeq gene 158340 158609 . + . ID=gene153;Name=SH03_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00770;old_locus_tag=SH03_00770 NZ_CP010441.1 Protein Homology CDS 158340 158609 . + 0 ID=cds138;Parent=gene153;Dbxref=Genbank:WP_001295263.1;Name=WP_001295263.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001295263.1;transl_table=11 NZ_CP010441.1 RefSeq gene 158686 159672 . + . ID=gene154;Name=SH03_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00775;old_locus_tag=SH03_00775 NZ_CP010441.1 Protein Homology CDS 158686 159672 . + 0 ID=cds139;Parent=gene154;Dbxref=Genbank:WP_001065497.1;Name=WP_001065497.1;Note=catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro%3B specific substrate in vivo has not been identified yet%3B plays a role in long-term cell survival and expression of surface appendages;gbkey=CDS;product=protein RdoA;protein_id=WP_001065497.1;transl_table=11 NZ_CP010441.1 RefSeq gene 159689 160315 . + . ID=gene155;Name=SH03_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00780;old_locus_tag=SH03_00780 NZ_CP010441.1 Protein Homology CDS 159689 160315 . + 0 ID=cds140;Parent=gene155;Dbxref=Genbank:WP_000725337.1;Name=WP_000725337.1;gbkey=CDS;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725337.1;transl_table=11 NZ_CP010441.1 RefSeq gene 160470 161900 . + . ID=gene156;Name=SH03_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00785;old_locus_tag=SH03_00785 NZ_CP010441.1 Protein Homology CDS 160470 161900 . + 0 ID=cds141;Parent=gene156;Dbxref=Genbank:WP_001333507.1;Name=WP_001333507.1;gbkey=CDS;product=DUF945 domain-containing protein;protein_id=WP_001333507.1;transl_table=11 NZ_CP010441.1 RefSeq gene 161941 162873 . - . ID=gene157;Name=SH03_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00790;old_locus_tag=SH03_00790 NZ_CP010441.1 Protein Homology CDS 161941 162873 . - 0 ID=cds142;Parent=gene157;Dbxref=Genbank:WP_001311257.1;Name=WP_001311257.1;gbkey=CDS;product=acyltransferase;protein_id=WP_001311257.1;transl_table=11 NZ_CP010441.1 RefSeq gene 162993 163235 . - . ID=gene158;Name=SH03_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00795;old_locus_tag=SH03_00795 NZ_CP010441.1 Protein Homology CDS 162993 163235 . - 0 ID=cds143;Parent=gene158;Dbxref=Genbank:WP_000115994.1;Name=WP_000115994.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000115994.1;transl_table=11 NZ_CP010441.1 RefSeq gene 163237 166023 . + . ID=gene159;Name=SH03_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00800;old_locus_tag=SH03_00800 NZ_CP010441.1 Protein Homology CDS 163237 166023 . + 0 ID=cds144;Parent=gene159;Dbxref=Genbank:WP_000250006.1;Name=WP_000250006.1;gbkey=CDS;product=DNA polymerase I;protein_id=WP_000250006.1;transl_table=11 NZ_CP010441.1 RefSeq gene 166404 167036 . - . ID=gene160;Name=SH03_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00805;old_locus_tag=SH03_00805 NZ_CP010441.1 Protein Homology CDS 166404 167036 . - 0 ID=cds145;Parent=gene160;Dbxref=Genbank:WP_000183349.1;Name=WP_000183349.1;gbkey=CDS;product=GTP-binding protein;protein_id=WP_000183349.1;transl_table=11 NZ_CP010441.1 RefSeq gene 167618 168127 . + . ID=gene161;Name=SH03_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00810;old_locus_tag=SH03_00810 NZ_CP010441.1 Protein Homology CDS 167618 168127 . + 0 ID=cds146;Parent=gene161;Dbxref=Genbank:WP_001295266.1;Name=WP_001295266.1;gbkey=CDS;product=der GTPase-activating protein YihI;protein_id=WP_001295266.1;transl_table=11 NZ_CP010441.1 RefSeq gene 168316 169689 . + . ID=gene162;Name=SH03_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00815;old_locus_tag=SH03_00815 NZ_CP010441.1 Protein Homology CDS 168316 169689 . + 0 ID=cds147;Parent=gene162;Dbxref=Genbank:WP_000116090.1;Name=WP_000116090.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_000116090.1;transl_table=11 NZ_CP010441.1 RefSeq gene 169918 170028 . - . ID=gene163;Name=SH03_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00820;old_locus_tag=SH03_00820 NZ_CP010441.1 Protein Homology CDS 169918 170028 . - 0 ID=cds148;Parent=gene163;Dbxref=Genbank:WP_000893994.1;Name=WP_000893994.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000893994.1;transl_table=11 NZ_CP010441.1 RefSeq gene 170140 171549 . - . ID=gene164;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=SH03_RS00825;old_locus_tag=SH03_00825 NZ_CP010441.1 Protein Homology CDS 170140 171549 . - 0 ID=cds149;Parent=gene164;Dbxref=Genbank:WP_001188777.1;Name=WP_001188777.1;Note=response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes%3B interacts with sigma-54;gbkey=CDS;gene=glnG;product=nitrogen regulation protein NR(I);protein_id=WP_001188777.1;transl_table=11 NZ_CP010441.1 RefSeq gene 171561 172610 . - . ID=gene165;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=SH03_RS00830;old_locus_tag=SH03_00830 NZ_CP010441.1 Protein Homology CDS 171561 172610 . - 0 ID=cds150;Parent=gene165;Dbxref=Genbank:WP_000190577.1;Name=WP_000190577.1;Note=sensory histidine kinase in two-component regulatory system with GlnG%3B acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation;gbkey=CDS;gene=glnL;product=PAS domain-containing two-component system sensor histidine kinase;protein_id=WP_000190577.1;transl_table=11 NZ_CP010441.1 RefSeq gene 172896 174305 . - . ID=gene166;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=SH03_RS00835;old_locus_tag=SH03_00835 NZ_CP010441.1 Protein Homology CDS 172896 174305 . - 0 ID=cds151;Parent=gene166;Dbxref=Genbank:WP_001271717.1;Name=WP_001271717.1;Note=forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme;gbkey=CDS;gene=glnA;product=glutamine synthetase;protein_id=WP_001271717.1;transl_table=11 NZ_CP010441.1 RefSeq gene 174284 174517 . - . ID=gene167;Name=SH03_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00840;old_locus_tag=SH03_00840 NZ_CP010441.1 Protein Homology CDS 174284 174517 . - 0 ID=cds152;Parent=gene167;Dbxref=Genbank:WP_023140569.1;Name=WP_023140569.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_023140569.1;transl_table=11 NZ_CP010441.1 RefSeq gene 174678 176501 . + . ID=gene168;Name=SH03_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00845;old_locus_tag=SH03_00845 NZ_CP010441.1 Protein Homology CDS 174678 176501 . + 0 ID=cds153;Parent=gene168;Dbxref=Genbank:WP_000570668.1;Name=WP_000570668.1;gbkey=CDS;product=GTP-binding protein;protein_id=WP_000570668.1;transl_table=11 NZ_CP010441.1 RefSeq gene 176718 177428 . + . ID=gene169;Name=SH03_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00850;old_locus_tag=SH03_00850 NZ_CP010441.1 Protein Homology CDS 176718 177428 . + 0 ID=cds154;Parent=gene169;Dbxref=Genbank:WP_000829798.1;Name=WP_000829798.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000829798.1;transl_table=11 NZ_CP010441.1 RefSeq gene 177436 178416 . + . ID=gene170;Name=SH03_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00855;old_locus_tag=SH03_00855 NZ_CP010441.1 Protein Homology CDS 177436 178416 . + 0 ID=cds155;Parent=gene170;Dbxref=Genbank:WP_000256396.1;Name=WP_000256396.1;gbkey=CDS;product=sugar phosphate isomerase;protein_id=WP_000256396.1;transl_table=11 NZ_CP010441.1 RefSeq gene 178518 179783 . + . ID=gene171;Name=SH03_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00860;old_locus_tag=SH03_00860 NZ_CP010441.1 Protein Homology CDS 178518 179783 . + 0 ID=cds156;Parent=gene171;Dbxref=Genbank:WP_000956313.1;Name=WP_000956313.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000956313.1;transl_table=11 NZ_CP010441.1 RefSeq gene 179874 180566 . - . ID=gene172;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=SH03_RS00865;old_locus_tag=SH03_00865 NZ_CP010441.1 Protein Homology CDS 179874 180566 . - 0 ID=cds157;Parent=gene172;Dbxref=Genbank:WP_000723465.1;Name=WP_000723465.1;Note=porin involved in the transport of small molecular weight solutes (up to 600 Daltons) across the cell wall%3B specific substrate still unknown;gbkey=CDS;gene=ompL;product=porin;protein_id=WP_000723465.1;transl_table=11 NZ_CP010441.1 RefSeq gene 180634 182037 . - . ID=gene173;Name=SH03_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00870;old_locus_tag=SH03_00870 NZ_CP010441.1 Protein Homology CDS 180634 182037 . - 0 ID=cds158;Parent=gene173;Dbxref=Genbank:WP_001295267.1;Name=WP_001295267.1;gbkey=CDS;product=sulfoquinovose importer;protein_id=WP_001295267.1;transl_table=11 NZ_CP010441.1 RefSeq gene 182080 183465 . - . ID=gene174;Name=SH03_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00875;old_locus_tag=SH03_00875 NZ_CP010441.1 Protein Homology CDS 182080 183465 . - 0 ID=cds159;Parent=gene174;Dbxref=Genbank:WP_000018380.1;Name=WP_000018380.1;gbkey=CDS;product=2%2C3-dihydroxypropane-1-sulfonate exporter;protein_id=WP_000018380.1;transl_table=11 NZ_CP010441.1 RefSeq gene 183511 185547 . - . ID=gene175;Name=SH03_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00880;old_locus_tag=SH03_00880 NZ_CP010441.1 Protein Homology CDS 183511 185547 . - 0 ID=cds160;Parent=gene175;Dbxref=Genbank:WP_000380843.1;Name=WP_000380843.1;gbkey=CDS;product=alpha-glucosidase YihQ;protein_id=WP_000380843.1;transl_table=11 NZ_CP010441.1 RefSeq gene 185746 186648 . - . ID=gene176;Name=SH03_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00885;old_locus_tag=SH03_00885 NZ_CP010441.1 Protein Homology CDS 185746 186648 . - 0 ID=cds161;Parent=gene176;Dbxref=Genbank:WP_001295268.1;Name=WP_001295268.1;gbkey=CDS;product=aldose-1-epimerase;protein_id=WP_001295268.1;transl_table=11 NZ_CP010441.1 RefSeq gene 186786 188027 . - . ID=gene177;Name=SH03_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00890;old_locus_tag=SH03_00890 NZ_CP010441.1 Protein Homology CDS 186786 188027 . - 0 ID=cds162;Parent=gene177;Dbxref=Genbank:WP_000870916.1;Name=WP_000870916.1;gbkey=CDS;product=sulfoquinovose isomerase;protein_id=WP_000870916.1;transl_table=11 NZ_CP010441.1 RefSeq gene 188044 188922 . - . ID=gene178;Name=SH03_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00895;old_locus_tag=SH03_00895 NZ_CP010441.1 Protein Homology CDS 188044 188922 . - 0 ID=cds163;Parent=gene178;Dbxref=Genbank:WP_001046453.1;Name=WP_001046453.1;gbkey=CDS;product=sulfofructosephosphate aldolase;protein_id=WP_001046453.1;transl_table=11 NZ_CP010441.1 RefSeq gene 188946 189842 . - . ID=gene179;Name=SH03_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00900;old_locus_tag=SH03_00900 NZ_CP010441.1 Protein Homology CDS 188946 189842 . - 0 ID=cds164;Parent=gene179;Dbxref=Genbank:WP_000718893.1;Name=WP_000718893.1;Note=catalyzes the formation of gamma hydroxybutyrate from succinate semialdehyde;gbkey=CDS;product=3-sulfolactaldehyde reductase;protein_id=WP_000718893.1;transl_table=11 NZ_CP010441.1 RefSeq gene 190010 190906 . + . ID=gene180;Name=SH03_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00905;old_locus_tag=SH03_00905 NZ_CP010441.1 Protein Homology CDS 190010 190906 . + 0 ID=cds165;Parent=gene180;Dbxref=Genbank:WP_000621656.1;Name=WP_000621656.1;gbkey=CDS;product=sulfofructose kinase;protein_id=WP_000621656.1;transl_table=11 NZ_CP010441.1 RefSeq gene 190940 191725 . + . ID=gene181;Name=SH03_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00910;old_locus_tag=SH03_00910 NZ_CP010441.1 Protein Homology CDS 190940 191725 . + 0 ID=cds166;Parent=gene181;Dbxref=Genbank:WP_000059678.1;Name=WP_000059678.1;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_000059678.1;transl_table=11 NZ_CP010441.1 RefSeq gene 191824 192423 . + . ID=gene182;Name=SH03_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00915;old_locus_tag=SH03_00915 NZ_CP010441.1 Protein Homology CDS 191824 192423 . + 0 ID=cds167;Parent=gene182;Dbxref=Genbank:WP_001295269.1;Name=WP_001295269.1;gbkey=CDS;product=alpha-D-glucose-1-phosphate phosphatase YihX;protein_id=WP_001295269.1;transl_table=11 NZ_CP010441.1 RefSeq gene 192417 193289 . + . ID=gene183;Name=SH03_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00920;old_locus_tag=SH03_00920 NZ_CP010441.1 Protein Homology CDS 192417 193289 . + 0 ID=cds168;Parent=gene183;Dbxref=Genbank:WP_000920762.1;Name=WP_000920762.1;gbkey=CDS;product=membrane protein;protein_id=WP_000920762.1;transl_table=11 NZ_CP010441.1 RefSeq gene 193286 193723 . + . ID=gene184;Name=SH03_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00925;old_locus_tag=SH03_00925 NZ_CP010441.1 Protein Homology CDS 193286 193723 . + 0 ID=cds169;Parent=gene184;Dbxref=Genbank:WP_000560983.1;Name=WP_000560983.1;Note=hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine;gbkey=CDS;product=D-aminoacyl-tRNA deacylase;protein_id=WP_000560983.1;transl_table=11 NZ_CP010441.1 RefSeq gene 193768 194709 . + . ID=gene185;Name=SH03_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00930;old_locus_tag=SH03_00930 NZ_CP010441.1 Protein Homology CDS 193768 194709 . + 0 ID=cds170;Parent=gene185;Dbxref=Genbank:WP_001297068.1;Name=WP_001297068.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001297068.1;transl_table=11 NZ_CP010441.1 RefSeq gene 195562 195780 . + . ID=gene186;Name=SH03_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00935;old_locus_tag=SH03_00935 NZ_CP010441.1 Protein Homology CDS 195562 195780 . + 0 ID=cds171;Parent=gene186;Dbxref=Genbank:WP_001295676.1;Name=WP_001295676.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001295676.1;transl_table=11 NZ_CP010441.1 RefSeq gene 195998 196240 . + . ID=gene187;Name=SH03_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00940;old_locus_tag=SH03_00940 NZ_CP010441.1 Protein Homology CDS 195998 196240 . + 0 ID=cds172;Parent=gene187;Dbxref=Genbank:WP_001086388.1;Name=WP_001086388.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001086388.1;transl_table=11 NZ_CP010441.1 RefSeq gene 196256 196405 . - . ID=gene188;Name=SH03_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00945;old_locus_tag=SH03_00945 NZ_CP010441.1 Protein Homology CDS 196256 196405 . - 0 ID=cds173;Parent=gene188;Dbxref=Genbank:WP_001442987.1;Name=WP_001442987.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001442987.1;transl_table=11 NZ_CP010441.1 RefSeq gene 196570 197499 . - . ID=gene189;Name=SH03_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00950;old_locus_tag=SH03_00950 NZ_CP010441.1 Protein Homology CDS 196570 197499 . - 0 ID=cds174;Parent=gene189;Dbxref=Genbank:WP_000027703.1;Name=WP_000027703.1;Note=required for the formation of active formate dehydrogenase;gbkey=CDS;product=protein FdhE;protein_id=WP_000027703.1;transl_table=11 NZ_CP010441.1 RefSeq gene 197496 198131 . - . ID=gene190;Name=SH03_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00955;old_locus_tag=SH03_00955 NZ_CP010441.1 Protein Homology CDS 197496 198131 . - 0 ID=cds175;Parent=gene190;Dbxref=Genbank:WP_000829013.1;Name=WP_000829013.1;Note=cytochrome b556(FDO) component%3B heme containing;gbkey=CDS;product=formate dehydrogenase cytochrome b556(fdo) subunit;protein_id=WP_000829013.1;transl_table=11 NZ_CP010441.1 RefSeq gene 198128 199030 . - . ID=gene191;Name=SH03_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00960;old_locus_tag=SH03_00960 NZ_CP010441.1 Protein Homology CDS 198128 199030 . - 0 ID=cds176;Parent=gene191;Dbxref=Genbank:WP_000331377.1;Name=WP_000331377.1;Note=beta subunit%3B involved in the use of formate as an electron donor during aerobic respiration%3B acts to transfer electrons from the major(alpha subunit) to the cytochrome b556(gamma subunit);gbkey=CDS;product=formate dehydrogenase-O iron-sulfur subunit;protein_id=WP_000331377.1;transl_table=11 NZ_CP010441.1 RefSeq gene 199043 201457 . - . ID=gene192;Name=SH03_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00965;old_locus_tag=SH03_00965 NZ_CP010441.1 Protein Homology CDS 199043 201457 . - 0 ID=cds177;Parent=gene192;Dbxref=Genbank:WP_000181540.1;Name=WP_000181540.1;gbkey=CDS;product=formate dehydrogenase subunit alpha;protein_id=WP_000181540.1;transl_table=11 NZ_CP010441.1 RefSeq gene 201506 202093 . - . ID=gene193;Name=SH03_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00970;old_locus_tag=SH03_00970 NZ_CP010441.1 Protein Homology CDS 201506 202093 . - 0 ID=cds178;Parent=gene193;Dbxref=Genbank:WP_001198358.1;Name=WP_001198358.1;gbkey=CDS;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_001198358.1;transl_table=11 NZ_CP010441.1 RefSeq gene 202287 203120 . + . ID=gene194;Name=SH03_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00975;old_locus_tag=SH03_00975 NZ_CP010441.1 Protein Homology CDS 202287 203120 . + 0 ID=cds179;Parent=gene194;Dbxref=Genbank:WP_000753617.1;Name=WP_000753617.1;Note=involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth;gbkey=CDS;product=protein FdhD;protein_id=WP_000753617.1;transl_table=11 NZ_CP010441.1 RefSeq gene 203273 204328 . + . ID=gene195;Name=SH03_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00980;old_locus_tag=SH03_00980 NZ_CP010441.1 Protein Homology CDS 203273 204328 . + 0 ID=cds180;Parent=gene195;Dbxref=Genbank:WP_001295677.1;Name=WP_001295677.1;gbkey=CDS;product=DUF3829 domain-containing protein;protein_id=WP_001295677.1;transl_table=11 NZ_CP010441.1 RefSeq gene 204378 206126 . - . ID=gene196;Name=SH03_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00985;old_locus_tag=SH03_00985 NZ_CP010441.1 Protein Homology CDS 204378 206126 . - 0 ID=cds181;Parent=gene196;Dbxref=Genbank:WP_000931299.1;Name=WP_000931299.1;Note=repressor of the frv operon%2C involved in phosphoenolpyruvate:sugar phosphotransferase system;gbkey=CDS;product=frv operon regulator%3B contains a PTS EIIA domain;protein_id=WP_000931299.1;transl_table=11 NZ_CP010441.1 RefSeq gene 206126 207196 . - . ID=gene197;Name=SH03_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00990;old_locus_tag=SH03_00990 NZ_CP010441.1 Protein Homology CDS 206126 207196 . - 0 ID=cds182;Parent=gene197;Dbxref=Genbank:WP_001019484.1;Name=WP_001019484.1;gbkey=CDS;product=peptidase;protein_id=WP_001019484.1;transl_table=11 NZ_CP010441.1 RefSeq gene 207186 208637 . - . ID=gene198;Name=SH03_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS00995;old_locus_tag=SH03_00995 NZ_CP010441.1 Protein Homology CDS 207186 208637 . - 0 ID=cds183;Parent=gene198;Dbxref=Genbank:WP_000446023.1;Name=WP_000446023.1;gbkey=CDS;product=fructose-like PTS system EIIBC component;protein_id=WP_000446023.1;transl_table=11 NZ_CP010441.1 RefSeq gene 208648 209094 . - . ID=gene199;Name=SH03_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01000;old_locus_tag=SH03_01000 NZ_CP010441.1 Protein Homology CDS 208648 209094 . - 0 ID=cds184;Parent=gene199;Dbxref=Genbank:WP_000729595.1;Name=WP_000729595.1;Note=with FrvBRX is part of the phosphoenolpyruvate-dependent sugar phosphotransferase system involved in the transport and phosphorylation of sugars%3B possibly responsible for the sugar specificity of the system;gbkey=CDS;product=fructose-like phosphotransferase enzyme IIA component;protein_id=WP_000729595.1;transl_table=11 NZ_CP010441.1 RefSeq gene 209395 209709 . - . ID=gene200;Name=SH03_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01005;old_locus_tag=SH03_01005 NZ_CP010441.1 Protein Homology CDS 209395 209709 . - 0 ID=cds185;Parent=gene200;Dbxref=Genbank:WP_000619493.1;Name=WP_000619493.1;gbkey=CDS;product=L-rhamnose mutarotase;protein_id=WP_000619493.1;transl_table=11 NZ_CP010441.1 RefSeq gene 209719 210543 . - . ID=gene201;Name=SH03_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01010;old_locus_tag=SH03_01010 NZ_CP010441.1 Protein Homology CDS 209719 210543 . - 0 ID=cds186;Parent=gene201;Dbxref=Genbank:WP_001179745.1;Name=WP_001179745.1;gbkey=CDS;product=rhamnulose-1-phosphate aldolase;protein_id=WP_001179745.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 210587 210989 . + . ID=id19;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 210994 212253 . - . ID=gene202;Name=SH03_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01015;old_locus_tag=SH03_01015 NZ_CP010441.1 Protein Homology CDS 210994 212253 . - 0 ID=cds187;Parent=gene202;Dbxref=Genbank:WP_001311268.1;Name=WP_001311268.1;Note=catalyzes the formation of L-rhamnulose from L-rhamnose;gbkey=CDS;product=L-rhamnose isomerase;protein_id=WP_001311268.1;transl_table=11 NZ_CP010441.1 RefSeq gene 212250 213719 . - . ID=gene203;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=SH03_RS01020;old_locus_tag=SH03_01020 NZ_CP010441.1 Protein Homology CDS 212250 213719 . - 0 ID=cds188;Parent=gene203;Dbxref=Genbank:WP_000144073.1;Name=WP_000144073.1;Note=catalyzes the ATP-dependent phosphorylation of rhamnulose;gbkey=CDS;gene=rhaB;product=rhamnulokinase;protein_id=WP_000144073.1;transl_table=11 NZ_CP010441.1 RefSeq gene 213798 213947 . + . ID=gene204;Name=SH03_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01025;old_locus_tag=SH03_01025 NZ_CP010441.1 Protein Homology CDS 213798 213947 . + 0 ID=cds189;Parent=gene204;Dbxref=Genbank:WP_000510376.1;Name=WP_000510376.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000510376.1;transl_table=11 NZ_CP010441.1 RefSeq gene 214007 214843 . + . ID=gene205;Name=SH03_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01030;old_locus_tag=SH03_01030 NZ_CP010441.1 Protein Homology CDS 214007 214843 . + 0 ID=cds190;Parent=gene205;Dbxref=Genbank:WP_000217137.1;Name=WP_000217137.1;gbkey=CDS;product=transcriptional activator RhaS;protein_id=WP_000217137.1;transl_table=11 NZ_CP010441.1 RefSeq gene 214917 215765 . + . ID=gene206;Name=SH03_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01035;old_locus_tag=SH03_01035 NZ_CP010441.1 Protein Homology CDS 214917 215765 . + 0 ID=cds191;Parent=gene206;Dbxref=Genbank:WP_001336056.1;Name=WP_001336056.1;Note=activates the expression of rhaRS in response to L-rhamnose;gbkey=CDS;product=HTH-type transcriptional activator RhaR;protein_id=WP_001336056.1;transl_table=11 NZ_CP010441.1 RefSeq gene 215762 216796 . - . ID=gene207;Name=SH03_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01040;old_locus_tag=SH03_01040 NZ_CP010441.1 Protein Homology CDS 215762 216796 . - 0 ID=cds192;Parent=gene207;Dbxref=Genbank:WP_000063526.1;Name=WP_000063526.1;Note=transports L-rhamnose and L-lyxose into the cell;gbkey=CDS;product=l-rhamnose-proton symporter;protein_id=WP_000063526.1;transl_table=11 NZ_CP010441.1 RefSeq gene 217081 217701 . + . ID=gene208;Name=SH03_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01045;old_locus_tag=SH03_01045 NZ_CP010441.1 Protein Homology CDS 217081 217701 . + 0 ID=cds193;Parent=gene208;Dbxref=Genbank:WP_000122641.1;Name=WP_000122641.1;Note=SodA%3B manganese binding%3B only present under aerobic conditions%3B destroys free radicals;gbkey=CDS;product=superoxide dismutase [Mn];protein_id=WP_000122641.1;transl_table=11 NZ_CP010441.1 RefSeq gene 217742 217858 . - . ID=gene209;Name=SH03_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01050;old_locus_tag=SH03_01050 NZ_CP010441.1 Protein Homology CDS 217742 217858 . - 0 ID=cds194;Parent=gene209;Dbxref=Genbank:WP_000598314.1;Name=WP_000598314.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000598314.1;transl_table=11 NZ_CP010441.1 RefSeq gene 217961 218944 . + . ID=gene210;Name=SH03_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01055;old_locus_tag=SH03_01055 NZ_CP010441.1 Protein Homology CDS 217961 218944 . + 0 ID=cds195;Parent=gene210;Dbxref=Genbank:WP_001166063.1;Name=WP_001166063.1;Note=transports degraded pectin products into the bacterial cell;gbkey=CDS;product=2-keto-3-deoxygluconate permease;protein_id=WP_001166063.1;transl_table=11 NZ_CP010441.1 RefSeq gene 219093 219767 . + . ID=gene211;Name=SH03_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01060;old_locus_tag=SH03_01060 NZ_CP010441.1 Protein Homology CDS 219093 219767 . + 0 ID=cds196;Parent=gene211;Dbxref=Genbank:WP_001270260.1;Name=WP_001270260.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001270260.1;transl_table=11 NZ_CP010441.1 RefSeq gene 219873 221246 . - . ID=gene212;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=SH03_RS01065;old_locus_tag=SH03_01065 NZ_CP010441.1 Protein Homology CDS 219873 221246 . - 0 ID=cds197;Parent=gene212;Dbxref=Genbank:WP_046377544.1;Name=WP_046377544.1;Note=part of two-component CpxA/CpxR system%3B senses envelope stress%3B upregulates a number of periplasmic folding and trafficking factors;gbkey=CDS;gene=cpxA;product=two-component system sensor histidine kinase;protein_id=WP_046377544.1;transl_table=11 NZ_CP010441.1 RefSeq gene 221243 221941 . - . ID=gene213;Name=SH03_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01070;old_locus_tag=SH03_01070 NZ_CP010441.1 Protein Homology CDS 221243 221941 . - 0 ID=cds198;Parent=gene213;Dbxref=Genbank:WP_001033722.1;Name=WP_001033722.1;Note=response regulator in two-component regulatory system with CpxA%3B part of the envelope stress response system;gbkey=CDS;product=two-component system response regulator;protein_id=WP_001033722.1;transl_table=11 NZ_CP010441.1 RefSeq gene 222091 222591 . + . ID=gene214;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=SH03_RS01075;old_locus_tag=SH03_01075 NZ_CP010441.1 Protein Homology CDS 222091 222591 . + 0 ID=cds199;Parent=gene214;Dbxref=Genbank:WP_001223800.1;Name=WP_001223800.1;Note=repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA%3B CpxP is degraded by DegP protease especially in the presence of misfolded substrates;gbkey=CDS;gene=cpxP;product=periplasmic protein CpxP;protein_id=WP_001223800.1;transl_table=11 NZ_CP010441.1 RefSeq gene 222740 223642 . + . ID=gene215;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;gene_synonym=yiiP;locus_tag=SH03_RS01080;old_locus_tag=SH03_01080 NZ_CP010441.1 Protein Homology CDS 222740 223642 . + 0 ID=cds200;Parent=gene215;Dbxref=Genbank:WP_001076742.1;Name=WP_001076742.1;Note=member of cation diffusion facilitator family%3B CDF%3B membrane-bound%3B induced by both zinc and iron%2C but does not induce resistance to zinc%3B can transport zinc(II) in a proton-dependent manner%3B instead this protein induces iron resistance%3B forms dimers;gbkey=CDS;gene=fieF;product=ferrous iron and zinc transporter;protein_id=WP_001076742.1;transl_table=11 NZ_CP010441.1 RefSeq gene 223823 224785 . + . ID=gene216;Name=SH03_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01085;old_locus_tag=SH03_01085 NZ_CP010441.1 Protein Homology CDS 223823 224785 . + 0 ID=cds201;Parent=gene216;Dbxref=Genbank:WP_000591795.1;Name=WP_000591795.1;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis;gbkey=CDS;product=ATP-dependent 6-phosphofructokinase;protein_id=WP_000591795.1;transl_table=11 NZ_CP010441.1 RefSeq gene 225105 226094 . + . ID=gene217;Name=SH03_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01090;old_locus_tag=SH03_01090 NZ_CP010441.1 Protein Homology CDS 225105 226094 . + 0 ID=cds202;Parent=gene217;Dbxref=Genbank:WP_001045689.1;Name=WP_001045689.1;gbkey=CDS;product=sulfate-binding protein;protein_id=WP_001045689.1;transl_table=11 NZ_CP010441.1 RefSeq gene 226201 226956 . + . ID=gene218;Name=SH03_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01095;old_locus_tag=SH03_01095 NZ_CP010441.1 Protein Homology CDS 226201 226956 . + 0 ID=cds203;Parent=gene218;Dbxref=Genbank:WP_001326656.1;Name=WP_001326656.1;gbkey=CDS;product=CDP-diacylglycerol pyrophosphatase;protein_id=WP_001326656.1;transl_table=11 NZ_CP010441.1 RefSeq gene 227011 227778 . - . ID=gene219;Name=SH03_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01100;old_locus_tag=SH03_01100 NZ_CP010441.1 Protein Homology CDS 227011 227778 . - 0 ID=cds204;Parent=gene219;Dbxref=Genbank:WP_001216325.1;Name=WP_001216325.1;Note=Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate;gbkey=CDS;product=triosephosphate isomerase;protein_id=WP_001216325.1;transl_table=11 NZ_CP010441.1 RefSeq gene 227886 228485 . - . ID=gene220;Name=SH03_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01105;old_locus_tag=SH03_01105 NZ_CP010441.1 Protein Homology CDS 227886 228485 . - 0 ID=cds205;Parent=gene220;Dbxref=Genbank:WP_000802216.1;Name=WP_000802216.1;gbkey=CDS;product=DUF1454 domain-containing protein;protein_id=WP_000802216.1;transl_table=11 NZ_CP010441.1 RefSeq gene 228586 229026 . + . ID=gene221;Name=SH03_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01110;old_locus_tag=SH03_01110 NZ_CP010441.1 Protein Homology CDS 228586 229026 . + 0 ID=cds206;Parent=gene221;Dbxref=Genbank:WP_000155257.1;Name=WP_000155257.1;gbkey=CDS;product=membrane protein;protein_id=WP_000155257.1;transl_table=11 NZ_CP010441.1 RefSeq gene 229238 229537 . + . ID=gene222;Name=SH03_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01115;old_locus_tag=SH03_01115 NZ_CP010441.1 Protein Homology CDS 229238 229537 . + 0 ID=cds207;Parent=gene222;Dbxref=Genbank:WP_000655989.1;Name=WP_000655989.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000655989.1;transl_table=11 NZ_CP010441.1 RefSeq gene 229564 229992 . + . ID=gene223;Name=SH03_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01120;old_locus_tag=SH03_01120 NZ_CP010441.1 Protein Homology CDS 229564 229992 . + 0 ID=cds208;Parent=gene223;Dbxref=Genbank:WP_000323556.1;Name=WP_000323556.1;Note=with UspC and Usp E is involved in resistance to UV radiation;gbkey=CDS;product=universal stress protein D;protein_id=WP_000323556.1;transl_table=11 NZ_CP010441.1 RefSeq gene 229997 230743 . - . ID=gene224;Name=SH03_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01125;old_locus_tag=SH03_01125 NZ_CP010441.1 Protein Homology CDS 229997 230743 . - 0 ID=cds209;Parent=gene224;Dbxref=Genbank:WP_000796332.1;Name=WP_000796332.1;gbkey=CDS;product=ferredoxin--NADP reductase;protein_id=WP_000796332.1;transl_table=11 NZ_CP010441.1 RefSeq gene 230840 231850 . - . ID=gene225;Name=SH03_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01130;old_locus_tag=SH03_01130 NZ_CP010441.1 Protein Homology CDS 230840 231850 . - 0 ID=cds210;Parent=gene225;Dbxref=Genbank:WP_001250644.1;Name=WP_001250644.1;gbkey=CDS;product=fructose 1%2C6-bisphosphatase;protein_id=WP_001250644.1;transl_table=11 NZ_CP010441.1 RefSeq gene 231985 233493 . - . ID=gene226;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=SH03_RS01135;old_locus_tag=SH03_01135 NZ_CP010441.1 Protein Homology CDS 231985 233493 . - 0 ID=cds211;Parent=gene226;Dbxref=Genbank:WP_000136788.1;Name=WP_000136788.1;Note=Converts glycerol and ADP to glycerol-3-phosphate and ADP;gbkey=CDS;gene=glpK;product=glycerol kinase;protein_id=WP_000136788.1;transl_table=11 NZ_CP010441.1 RefSeq gene 233516 234361 . - . ID=gene227;Name=SH03_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01140;old_locus_tag=SH03_01140 NZ_CP010441.1 Protein Homology CDS 233516 234361 . - 0 ID=cds212;Parent=gene227;Dbxref=Genbank:WP_000084268.1;Name=WP_000084268.1;Note=involved in the transport of glycerol into the cell;gbkey=CDS;product=glycerol uptake facilitator protein;protein_id=WP_000084268.1;transl_table=11 NZ_CP010441.1 RefSeq gene 234792 235031 . + . ID=gene228;Name=SH03_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01145;old_locus_tag=SH03_01145 NZ_CP010441.1 Protein Homology CDS 234792 235031 . + 0 ID=cds213;Parent=gene228;Dbxref=Genbank:WP_001295521.1;Name=WP_001295521.1;Note=interacts with FisZ and is necessary for Z-ring formation;gbkey=CDS;product=cell division protein ZapB;protein_id=WP_001295521.1;transl_table=11 NZ_CP010441.1 RefSeq gene 235116 235601 . - . ID=gene229;Name=SH03_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01150;old_locus_tag=SH03_01150 NZ_CP010441.1 Protein Homology CDS 235116 235601 . - 0 ID=cds214;Parent=gene229;Dbxref=Genbank:WP_000872908.1;Name=WP_000872908.1;Note=regulator of RNase E%3B increases half-life and abundance of RNAs%3B interacts with RNase E possibly inhibiting catalytic activity;gbkey=CDS;product=ribonuclease E activity regulator RraA;protein_id=WP_000872908.1;transl_table=11 NZ_CP010441.1 RefSeq gene 235694 236620 . - . ID=gene230;Name=SH03_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01155;old_locus_tag=SH03_01155 NZ_CP010441.1 Protein Homology CDS 235694 236620 . - 0 ID=cds215;Parent=gene230;Dbxref=Genbank:WP_000139496.1;Name=WP_000139496.1;Note=catalyzes the formation of dimethylmenaquinone from 1%2C4-dihydroxy-2-naphthoate and octaprenyl diphosphate;gbkey=CDS;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=WP_000139496.1;transl_table=11 NZ_CP010441.1 RefSeq gene 236687 238018 . - . ID=gene231;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=SH03_RS01160;old_locus_tag=SH03_01160 NZ_CP010441.1 Protein Homology CDS 236687 238018 . - 0 ID=cds216;Parent=gene231;Dbxref=Genbank:WP_001293341.1;Name=WP_001293341.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;gene=hslU;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_001293341.1;transl_table=11 NZ_CP010441.1 RefSeq gene 238028 238558 . - . ID=gene232;Name=SH03_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01165;old_locus_tag=SH03_01165 NZ_CP010441.1 Protein Homology CDS 238028 238558 . - 0 ID=cds217;Parent=gene232;Dbxref=Genbank:WP_000208242.1;Name=WP_000208242.1;gbkey=CDS;product=ATP-dependent protease subunit HslV;protein_id=WP_000208242.1;transl_table=11 NZ_CP010441.1 RefSeq gene 238651 239505 . - . ID=gene233;Name=SH03_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01170;old_locus_tag=SH03_01170 NZ_CP010441.1 Protein Homology CDS 238651 239505 . - 0 ID=cds218;Parent=gene233;Dbxref=Genbank:WP_001325202.1;Name=WP_001325202.1;gbkey=CDS;product=cell division protein FtsN;protein_id=WP_001325202.1;transl_table=11 NZ_CP010441.1 RefSeq gene 239702 240727 . - . ID=gene234;Name=SH03_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01175;old_locus_tag=SH03_01175 NZ_CP010441.1 Protein Homology CDS 239702 240727 . - 0 ID=cds219;Parent=gene234;Dbxref=Genbank:WP_000644904.1;Name=WP_000644904.1;Note=negatively controls the transcription initiation of genes such as deoCABD%2C udp%2C and cdd encoding catabolizing enzymes and nupC%2C nupG%2C and tsx encoding transporting and pore-forming proteins;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000644904.1;transl_table=11 NZ_CP010441.1 RefSeq gene 240883 243081 . - . ID=gene235;Name=SH03_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01180;old_locus_tag=SH03_01180 NZ_CP010441.1 Protein Homology CDS 240883 243081 . - 0 ID=cds220;Parent=gene235;Dbxref=Genbank:WP_001301269.1;Name=WP_001301269.1;Note=binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity;gbkey=CDS;product=primosomal protein N';protein_id=WP_001301269.1;transl_table=11 NZ_CP010441.1 RefSeq gene 243284 243496 . + . ID=gene236;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=SH03_RS01185;old_locus_tag=SH03_01185 NZ_CP010441.1 Protein Homology CDS 243284 243496 . + 0 ID=cds221;Parent=gene236;Dbxref=Genbank:WP_000710769.1;Name=WP_000710769.1;Note=RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;gbkey=CDS;gene=rpmE;product=50S ribosomal protein L31;protein_id=WP_000710769.1;transl_table=11 NZ_CP010441.1 RefSeq gene 243557 244165 . - . ID=gene237;Name=SH03_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01190;old_locus_tag=SH03_01190 NZ_CP010441.1 Protein Homology CDS 243557 244165 . - 0 ID=cds222;Parent=gene237;Dbxref=Genbank:WP_000797353.1;Name=WP_000797353.1;gbkey=CDS;product=lipid binding hydrolase DUF830 family protein;protein_id=WP_000797353.1;transl_table=11 NZ_CP010441.1 RefSeq gene 244349 244666 . - . ID=gene238;Name=SH03_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01195;old_locus_tag=SH03_01195 NZ_CP010441.1 Protein Homology CDS 244349 244666 . - 0 ID=cds223;Parent=gene238;Dbxref=Genbank:WP_000852812.1;Name=WP_000852812.1;Note=when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis;gbkey=CDS;product=met repressor;protein_id=WP_000852812.1;transl_table=11 NZ_CP010441.1 RefSeq gene 244943 246101 . + . ID=gene239;Name=SH03_RS01200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS01200;pseudo=true NZ_CP010441.1 Protein Homology CDS 244943 246101 . + 0 ID=cds224;Parent=gene239;Note=catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine;exception=annotated by transcript or proteomic data;gbkey=CDS;product=cystathionine gamma-synthase;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 246104 248536 . + . ID=gene240;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;gene_synonym=metM;locus_tag=SH03_RS01205;old_locus_tag=SH03_01205 NZ_CP010441.1 Protein Homology CDS 246104 248536 . + 0 ID=cds225;Parent=gene240;Dbxref=Genbank:WP_000110772.1;Name=WP_000110772.1;Note=multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=metL;product=bifunctional aspartokinase/homoserine dehydrogenase 2;protein_id=WP_000110772.1;transl_table=11 NZ_CP010441.1 RefSeq gene 248675 248809 . - . ID=gene241;Name=SH03_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01210;old_locus_tag=SH03_01210 NZ_CP010441.1 Protein Homology CDS 248675 248809 . - 0 ID=cds226;Parent=gene241;Dbxref=Genbank:WP_000660586.1;Name=WP_000660586.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000660586.1;transl_table=11 NZ_CP010441.1 RefSeq gene 248885 249775 . + . ID=gene242;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=SH03_RS01215;old_locus_tag=SH03_01215 NZ_CP010441.1 Protein Homology CDS 248885 249775 . + 0 ID=cds227;Parent=gene242;Dbxref=Genbank:WP_000007523.1;Name=WP_000007523.1;Note=MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor;gbkey=CDS;gene=metF;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=WP_000007523.1;transl_table=11 NZ_CP010441.1 RefSeq gene 250104 252284 . + . ID=gene243;Name=SH03_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01220;old_locus_tag=SH03_01220 NZ_CP010441.1 Protein Homology CDS 250104 252284 . + 0 ID=cds228;Parent=gene243;Dbxref=Genbank:WP_001295695.1;Name=WP_001295695.1;gbkey=CDS;product=catalase-peroxidase;protein_id=WP_001295695.1;transl_table=11 NZ_CP010441.1 RefSeq gene 252377 253282 . + . ID=gene244;Name=SH03_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01225;old_locus_tag=SH03_01225 NZ_CP010441.1 Protein Homology CDS 252377 253282 . + 0 ID=cds229;Parent=gene244;Dbxref=Genbank:WP_001271242.1;Name=WP_001271242.1;gbkey=CDS;product=permease;protein_id=WP_001271242.1;transl_table=11 NZ_CP010441.1 RefSeq gene 253309 253926 . - . ID=gene245;Name=SH03_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01230;old_locus_tag=SH03_01230 NZ_CP010441.1 Protein Homology CDS 253309 253926 . - 0 ID=cds230;Parent=gene245;Dbxref=Genbank:WP_000647891.1;Name=WP_000647891.1;gbkey=CDS;product=DUF1287 domain-containing protein;protein_id=WP_000647891.1;transl_table=11 NZ_CP010441.1 RefSeq gene 254038 254157 . - . ID=gene246;Name=SH03_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01235;old_locus_tag=SH03_01235 NZ_CP010441.1 Protein Homology CDS 254038 254157 . - 0 ID=cds231;Parent=gene246;Dbxref=Genbank:WP_001442985.1;Name=WP_001442985.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001442985.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 254057 254164 . + . ID=id20;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 254201 255304 . - . ID=gene247;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=SH03_RS01240;old_locus_tag=SH03_01240 NZ_CP010441.1 Protein Homology CDS 254201 255304 . - 0 ID=cds232;Parent=gene247;Dbxref=Genbank:WP_000374004.1;Name=WP_000374004.1;Note=forms dimers and octamers%3B involved in conversion of glycerol to dihydroxy-acetone;gbkey=CDS;gene=gldA;product=glycerol dehydrogenase;protein_id=WP_000374004.1;transl_table=11 NZ_CP010441.1 RefSeq gene 255315 255977 . - . ID=gene248;Name=SH03_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01245;old_locus_tag=SH03_01245 NZ_CP010441.1 Protein Homology CDS 255315 255977 . - 0 ID=cds233;Parent=gene248;Dbxref=Genbank:WP_000424840.1;Name=WP_000424840.1;Note=similar to transaldolase from Escherichia coli%3B many organisms have multiple copies;gbkey=CDS;product=fructose-6-phosphate aldolase 2;protein_id=WP_000424840.1;transl_table=11 NZ_CP010441.1 RefSeq gene 255989 258490 . - . ID=gene249;Name=SH03_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01250;old_locus_tag=SH03_01250 NZ_CP010441.1 Protein Homology CDS 255989 258490 . - 0 ID=cds234;Parent=gene249;Dbxref=Genbank:WP_001174077.1;Name=WP_001174077.1;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein HPr%3B HPr transfers the phosphoryl group to subunit A%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system;gbkey=CDS;product=multiphosphoryl transfer protein 2;protein_id=WP_001174077.1;transl_table=11 NZ_CP010441.1 RefSeq gene 258799 259878 . + . ID=gene250;Name=SH03_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01255;old_locus_tag=SH03_01255 NZ_CP010441.1 Protein Homology CDS 258799 259878 . + 0 ID=cds235;Parent=gene250;Dbxref=Genbank:WP_001004446.1;Name=WP_001004446.1;gbkey=CDS;product=fructose-like permease IIC component 2;protein_id=WP_001004446.1;transl_table=11 NZ_CP010441.1 RefSeq gene 259893 260213 . + . ID=gene251;Name=SH03_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01260;old_locus_tag=SH03_01260 NZ_CP010441.1 Protein Homology CDS 259893 260213 . + 0 ID=cds236;Parent=gene251;Dbxref=Genbank:WP_000161265.1;Name=WP_000161265.1;Note=FrwB with FrwC%2C FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system (PTS) permease which may phosphorylate and transport sugars into the cell%3B cytoplasmic protein that interacts with complex EIIA%3B contains the second phosphorylation site of the PTS;gbkey=CDS;product=fructose-like phosphotransferase enzyme IIB component 2;protein_id=WP_000161265.1;transl_table=11 NZ_CP010441.1 RefSeq gene 260264 262561 . + . ID=gene252;Name=pflD;gbkey=Gene;gene=pflD;gene_biotype=protein_coding;locus_tag=SH03_RS01265;old_locus_tag=SH03_01265 NZ_CP010441.1 Protein Homology CDS 260264 262561 . + 0 ID=cds237;Parent=gene252;Dbxref=Genbank:WP_000184811.1;Name=WP_000184811.1;Note=involved in production of D-lactate from glucose under microaerobic conditions%3B cytoplasmic protein;gbkey=CDS;gene=pflD;product=formate acetyltransferase 2;protein_id=WP_000184811.1;transl_table=11 NZ_CP010441.1 RefSeq gene 262527 263405 . + . ID=gene253;Name=SH03_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01270;old_locus_tag=SH03_01270 NZ_CP010441.1 Protein Homology CDS 262527 263405 . + 0 ID=cds238;Parent=gene253;Dbxref=Genbank:WP_000204105.1;Name=WP_000204105.1;gbkey=CDS;product=pyruvate formate-lyase 2-activating enzyme;protein_id=WP_000204105.1;transl_table=11 NZ_CP010441.1 RefSeq gene 263407 263748 . + . ID=gene254;Name=SH03_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01275;old_locus_tag=SH03_01275 NZ_CP010441.1 Protein Homology CDS 263407 263748 . + 0 ID=cds239;Parent=gene254;Dbxref=Genbank:WP_000323846.1;Name=WP_000323846.1;Note=FrwD with FrwB%2C FrwC and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell%3B phosphorylated by EIIA%3B FrwB homolog;gbkey=CDS;product=fructose-like phosphotransferase enzyme IIB component 3;protein_id=WP_000323846.1;transl_table=11 NZ_CP010441.1 RefSeq gene 263735 264586 . - . ID=gene255;Name=SH03_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01280;old_locus_tag=SH03_01280 NZ_CP010441.1 Protein Homology CDS 263735 264586 . - 0 ID=cds240;Parent=gene255;Dbxref=Genbank:WP_000274636.1;Name=WP_000274636.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_000274636.1;transl_table=11 NZ_CP010441.1 RefSeq gene 264801 266534 . - . ID=gene256;Name=SH03_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01285;old_locus_tag=SH03_01285 NZ_CP010441.1 Protein Homology CDS 264801 266534 . - 0 ID=cds241;Parent=gene256;Dbxref=Genbank:WP_000556306.1;Name=WP_000556306.1;gbkey=CDS;product=phosphoethanolamine transferase EptC;protein_id=WP_000556306.1;transl_table=11 NZ_CP010441.1 RefSeq gene 266716 269367 . - . ID=gene257;Name=SH03_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01290;old_locus_tag=SH03_01290 NZ_CP010441.1 Protein Homology CDS 266716 269367 . - 0 ID=cds242;Parent=gene257;Dbxref=Genbank:WP_001005586.1;Name=WP_001005586.1;Note=catalyzes the formation of oxaloacetate from phosphoenolpyruvate;gbkey=CDS;product=phosphoenolpyruvate carboxylase;protein_id=WP_001005586.1;transl_table=11 NZ_CP010441.1 RefSeq gene 269585 269977 . - . ID=gene258;Name=SH03_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01295;old_locus_tag=SH03_01295 NZ_CP010441.1 Protein Homology CDS 269585 269977 . - 0 ID=cds243;Parent=gene258;Dbxref=Genbank:WP_000880425.1;Name=WP_000880425.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000880425.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 269615 269962 . + . ID=id21;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 269965 271116 . - . ID=gene259;Name=SH03_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01300;old_locus_tag=SH03_01300 NZ_CP010441.1 Protein Homology CDS 269965 271116 . - 0 ID=cds244;Parent=gene259;Dbxref=Genbank:WP_001298964.1;Name=WP_001298964.1;Note=catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis;gbkey=CDS;product=acetylornithine deacetylase;protein_id=WP_001298964.1;transl_table=11 NZ_CP010441.1 RefSeq gene 271270 272274 . + . ID=gene260;Name=SH03_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01305;old_locus_tag=SH03_01305 NZ_CP010441.1 Protein Homology CDS 271270 272274 . + 0 ID=cds245;Parent=gene260;Dbxref=Genbank:WP_000935370.1;Name=WP_000935370.1;gbkey=CDS;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_000935370.1;transl_table=11 NZ_CP010441.1 RefSeq gene 272285 273058 . + . ID=gene261;Name=SH03_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01310;old_locus_tag=SH03_01310 NZ_CP010441.1 Protein Homology CDS 272285 273058 . + 0 ID=cds246;Parent=gene261;Dbxref=Genbank:WP_001295507.1;Name=WP_001295507.1;gbkey=CDS;product=acetylglutamate kinase;protein_id=WP_001295507.1;transl_table=11 NZ_CP010441.1 RefSeq gene 273119 274492 . + . ID=gene262;Name=SH03_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01315;old_locus_tag=SH03_01315 NZ_CP010441.1 Protein Homology CDS 273119 274492 . + 0 ID=cds247;Parent=gene262;Dbxref=Genbank:WP_001230087.1;Name=WP_001230087.1;Note=catalyzes the formation of arginine from (N-L-arginino)succinate;gbkey=CDS;product=argininosuccinate lyase;protein_id=WP_001230087.1;transl_table=11 NZ_CP010441.1 RefSeq gene 274759 275676 . + . ID=gene263;Name=SH03_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01320;old_locus_tag=SH03_01320 NZ_CP010441.1 Protein Homology CDS 274759 275676 . + 0 ID=cds248;Parent=gene263;Dbxref=Genbank:WP_001025939.1;Name=WP_001025939.1;Note=Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG%2C gor%2C ahpC%2C ahpF%2C oxyS%2C dps%2C fur and grxA;gbkey=CDS;product=hydrogen peroxide-inducible genes activator;protein_id=WP_001025939.1;transl_table=11 NZ_CP010441.1 RefSeq gene 275659 277059 . - . ID=gene264;Name=SH03_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01325;old_locus_tag=SH03_01325 NZ_CP010441.1 Protein Homology CDS 275659 277059 . - 0 ID=cds249;Parent=gene264;Dbxref=Genbank:WP_001120810.1;Name=WP_001120810.1;Note=catalyzes the conversion of NADPH to NADH;gbkey=CDS;product=soluble pyridine nucleotide transhydrogenase;protein_id=WP_001120810.1;transl_table=11 NZ_CP010441.1 RefSeq gene 277393 278040 . + . ID=gene265;Name=SH03_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01330;old_locus_tag=SH03_01330 NZ_CP010441.1 Protein Homology CDS 277393 278040 . + 0 ID=cds250;Parent=gene265;Dbxref=Genbank:WP_001300495.1;Name=WP_001300495.1;Note=negatively controls the expression of fabA and fabB%2C genes involved in the unsaturated fatty acid biosynthesis;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001300495.1;transl_table=11 NZ_CP010441.1 RefSeq gene 278040 278399 . + . ID=gene266;Name=SH03_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01335;old_locus_tag=SH03_01335 NZ_CP010441.1 Protein Homology CDS 278040 278399 . + 0 ID=cds251;Parent=gene266;Dbxref=Genbank:WP_000806411.1;Name=WP_000806411.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000806411.1;transl_table=11 NZ_CP010441.1 RefSeq gene 278439 279539 . - . ID=gene267;Name=SH03_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01340;old_locus_tag=SH03_01340 NZ_CP010441.1 Protein Homology CDS 278439 279539 . - 0 ID=cds252;Parent=gene267;Dbxref=Genbank:WP_000187022.1;Name=WP_000187022.1;Note=catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs;gbkey=CDS;product=tRNA/tmRNA (uracil-C(5))-methyltransferase;protein_id=WP_000187022.1;transl_table=11 NZ_CP010441.1 RefSeq gene 279908 281752 . + . ID=gene268;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=SH03_RS01345;old_locus_tag=SH03_01345 NZ_CP010441.1 Protein Homology CDS 279908 281752 . + 0 ID=cds253;Parent=gene268;Dbxref=Genbank:WP_000591359.1;Name=WP_000591359.1;Note=involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space;gbkey=CDS;gene=btuB;product=vitamin B12 transporter BtuB;protein_id=WP_000591359.1;transl_table=11 NZ_CP010441.1 RefSeq gene 281766 282554 . + . ID=gene269;Name=SH03_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01350;old_locus_tag=SH03_01350 NZ_CP010441.1 Protein Homology CDS 281766 282554 . + 0 ID=cds254;Parent=gene269;Dbxref=Genbank:WP_001301274.1;Name=WP_001301274.1;Note=converts L-glutamate to D-glutamate%2C a component of peptidoglycan;gbkey=CDS;product=glutamate racemase;protein_id=WP_001301274.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 282568 288146 . + . ID=id22;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 282926 284481 . + . ID=gene270;Name=SH03_RS01355;gbkey=Gene;gene_biotype=rRNA;locus_tag=SH03_RS01355;old_locus_tag=SH03_01355 NZ_CP010441.1 RefSeq rRNA 282926 284481 . + . ID=rna15;Parent=gene270;gbkey=rRNA;product=16S ribosomal RNA NZ_CP010441.1 RefSeq exon 282926 284481 . + . ID=id23;Parent=rna15;gbkey=rRNA;product=16S ribosomal RNA NZ_CP010441.1 RefSeq gene 284555 284630 . + . ID=gene271;Name=SH03_RS01360;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS01360;old_locus_tag=SH03_01360 NZ_CP010441.1 tRNAscan-SE tRNA 284555 284630 . + . ID=rna16;Parent=gene271;anticodon=(pos:284589..284591);gbkey=tRNA;product=tRNA-Glu NZ_CP010441.1 tRNAscan-SE exon 284555 284630 . + . ID=id24;Parent=rna16;anticodon=(pos:284589..284591);gbkey=tRNA;product=tRNA-Glu NZ_CP010441.1 RefSeq gene 284815 287742 . + . ID=gene272;Name=SH03_RS01365;gbkey=Gene;gene_biotype=rRNA;locus_tag=SH03_RS01365;old_locus_tag=SH03_01365 NZ_CP010441.1 RefSeq rRNA 284815 287742 . + . ID=rna17;Parent=gene272;gbkey=rRNA;product=23S ribosomal RNA NZ_CP010441.1 RefSeq exon 284815 287742 . + . ID=id25;Parent=rna17;gbkey=rRNA;product=23S ribosomal RNA NZ_CP010441.1 RefSeq gene 287820 287935 . + . ID=gene273;Name=SH03_RS01370;gbkey=Gene;gene_biotype=rRNA;locus_tag=SH03_RS01370;old_locus_tag=SH03_01370 NZ_CP010441.1 cmsearch rRNA 287820 287935 . + . ID=rna18;Parent=gene273;gbkey=rRNA;product=5S ribosomal RNA NZ_CP010441.1 cmsearch exon 287820 287935 . + . ID=id26;Parent=rna18;gbkey=rRNA;product=5S ribosomal RNA NZ_CP010441.1 RefSeq gene 288238 289266 . + . ID=gene274;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=SH03_RS01375;old_locus_tag=SH03_01375 NZ_CP010441.1 Protein Homology CDS 288238 289266 . + 0 ID=cds255;Parent=gene274;Dbxref=Genbank:WP_001016699.1;Name=WP_001016699.1;Note=catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis;gbkey=CDS;gene=murB;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=WP_001016699.1;transl_table=11 NZ_CP010441.1 RefSeq gene 289263 290228 . + . ID=gene275;Name=SH03_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01380;old_locus_tag=SH03_01380 NZ_CP010441.1 Protein Homology CDS 289263 290228 . + 0 ID=cds256;Parent=gene275;Dbxref=Genbank:WP_000654630.1;Name=WP_000654630.1;Note=catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon;gbkey=CDS;product=bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor;protein_id=WP_000654630.1;transl_table=11 NZ_CP010441.1 RefSeq gene 290257 291213 . - . ID=gene276;Name=SH03_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01385;old_locus_tag=SH03_01385 NZ_CP010441.1 Protein Homology CDS 290257 291213 . - 0 ID=cds257;Parent=gene276;Dbxref=Genbank:WP_001351265.1;Name=WP_001351265.1;gbkey=CDS;product=type I pantothenate kinase;protein_id=WP_001351265.1;transl_table=11 NZ_CP010441.1 RefSeq gene 291394 291549 . - . ID=gene277;Name=SH03_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01390;old_locus_tag=SH03_01390 NZ_CP010441.1 Protein Homology CDS 291394 291549 . - 0 ID=cds258;Parent=gene277;Dbxref=Genbank:WP_001303748.1;Name=WP_001303748.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001303748.1;transl_table=11 NZ_CP010441.1 RefSeq gene 291569 291644 . + . ID=gene278;Name=SH03_RS01395;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS01395;old_locus_tag=SH03_01395 NZ_CP010441.1 tRNAscan-SE tRNA 291569 291644 . + . ID=rna19;Parent=gene278;anticodon=(pos:291602..291604);gbkey=tRNA;product=tRNA-Thr NZ_CP010441.1 tRNAscan-SE exon 291569 291644 . + . ID=id27;Parent=rna19;anticodon=(pos:291602..291604);gbkey=tRNA;product=tRNA-Thr NZ_CP010441.1 RefSeq gene 291653 291737 . + . ID=gene279;Name=SH03_RS01400;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS01400;old_locus_tag=SH03_01400 NZ_CP010441.1 tRNAscan-SE tRNA 291653 291737 . + . ID=rna20;Parent=gene279;anticodon=(pos:291687..291689);gbkey=tRNA;product=tRNA-Tyr NZ_CP010441.1 tRNAscan-SE exon 291653 291737 . + . ID=id28;Parent=rna20;anticodon=(pos:291687..291689);gbkey=tRNA;product=tRNA-Tyr NZ_CP010441.1 RefSeq gene 291854 291928 . + . ID=gene280;Name=SH03_RS01405;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS01405;old_locus_tag=SH03_01405 NZ_CP010441.1 tRNAscan-SE tRNA 291854 291928 . + . ID=rna21;Parent=gene280;anticodon=(pos:291887..291889);gbkey=tRNA;product=tRNA-Gly NZ_CP010441.1 tRNAscan-SE exon 291854 291928 . + . ID=id29;Parent=rna21;anticodon=(pos:291887..291889);gbkey=tRNA;product=tRNA-Gly NZ_CP010441.1 RefSeq gene 291935 292010 . + . ID=gene281;Name=SH03_RS01410;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS01410;old_locus_tag=SH03_01410 NZ_CP010441.1 tRNAscan-SE tRNA 291935 292010 . + . ID=rna22;Parent=gene281;anticodon=(pos:291968..291970);gbkey=tRNA;product=tRNA-Thr NZ_CP010441.1 tRNAscan-SE exon 291935 292010 . + . ID=id30;Parent=rna22;anticodon=(pos:291968..291970);gbkey=tRNA;product=tRNA-Thr NZ_CP010441.1 RefSeq gene 292125 293309 . + . ID=gene282;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=SH03_RS01415;old_locus_tag=SH03_01415 NZ_CP010441.1 Protein Homology CDS 292125 293309 . + 0 ID=cds259;Parent=gene282;Dbxref=Genbank:WP_000031784.1;Name=WP_000031784.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;product=translation elongation factor EF-Tu 2;protein_id=WP_000031784.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 292126 293311 . + . ID=id31;gbkey=repeat_region;gene=tuf NZ_CP010441.1 RefSeq gene 293539 293922 . + . ID=gene283;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=SH03_RS01420;old_locus_tag=SH03_01420 NZ_CP010441.1 Protein Homology CDS 293539 293922 . + 0 ID=cds260;Parent=gene283;Dbxref=Genbank:WP_001275702.1;Name=WP_001275702.1;Note=forms a complex with SecY and SecG%3B SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force;gbkey=CDS;gene=secE;product=protein translocase subunit SecE;protein_id=WP_001275702.1;transl_table=11 NZ_CP010441.1 RefSeq gene 293924 294469 . + . ID=gene284;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=SH03_RS01425;old_locus_tag=SH03_01425 NZ_CP010441.1 Protein Homology CDS 293924 294469 . + 0 ID=cds261;Parent=gene284;Dbxref=Genbank:WP_001287516.1;Name=WP_001287516.1;Note=Modulates Rho-dependent transcription termination;gbkey=CDS;gene=nusG;product=transcription termination/antitermination protein NusG;protein_id=WP_001287516.1;transl_table=11 NZ_CP010441.1 RefSeq gene 294628 295056 . + . ID=gene285;Name=SH03_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01430;old_locus_tag=SH03_01430 NZ_CP010441.1 Protein Homology CDS 294628 295056 . + 0 ID=cds262;Parent=gene285;Dbxref=Genbank:WP_001085926.1;Name=WP_001085926.1;gbkey=CDS;product=50S ribosomal protein L11;protein_id=WP_001085926.1;transl_table=11 NZ_CP010441.1 RefSeq gene 295060 295764 . + . ID=gene286;Name=SH03_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01435;old_locus_tag=SH03_01435 NZ_CP010441.1 Protein Homology CDS 295060 295764 . + 0 ID=cds263;Parent=gene286;Dbxref=Genbank:WP_001096684.1;Name=WP_001096684.1;gbkey=CDS;product=50S ribosomal protein L1;protein_id=WP_001096684.1;transl_table=11 NZ_CP010441.1 RefSeq gene 296177 296674 . + . ID=gene287;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=SH03_RS01440;old_locus_tag=SH03_01440 NZ_CP010441.1 Protein Homology CDS 296177 296674 . + 0 ID=cds264;Parent=gene287;Dbxref=Genbank:WP_001207201.1;Name=WP_001207201.1;Note=binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit;gbkey=CDS;gene=rplJ;product=50S ribosomal protein L10;protein_id=WP_001207201.1;transl_table=11 NZ_CP010441.1 RefSeq gene 296741 297106 . + . ID=gene288;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=SH03_RS01445;old_locus_tag=SH03_01445 NZ_CP010441.1 Protein Homology CDS 296741 297106 . + 0 ID=cds265;Parent=gene288;Dbxref=Genbank:WP_000028878.1;Name=WP_000028878.1;Note=present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors;gbkey=CDS;gene=rplL;product=50S ribosomal protein L7/L12;protein_id=WP_000028878.1;transl_table=11 NZ_CP010441.1 RefSeq gene 297426 301454 . + . ID=gene289;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=SH03_RS01450;old_locus_tag=SH03_01450 NZ_CP010441.1 Protein Homology CDS 297426 301454 . + 0 ID=cds266;Parent=gene289;Dbxref=Genbank:WP_000263098.1;Name=WP_000263098.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme;gbkey=CDS;gene=rpoB;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000263098.1;transl_table=11 NZ_CP010441.1 RefSeq gene 301531 305754 . + . ID=gene290;Name=SH03_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01455;old_locus_tag=SH03_01455 NZ_CP010441.1 Protein Homology CDS 301531 305754 . + 0 ID=cds267;Parent=gene290;Dbxref=Genbank:WP_000653944.1;Name=WP_000653944.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter;gbkey=CDS;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000653944.1;transl_table=11 NZ_CP010441.1 RefSeq gene 305967 306506 . + . ID=gene291;Name=SH03_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01460;old_locus_tag=SH03_01460 NZ_CP010441.1 Protein Homology CDS 305967 306506 . + 0 ID=cds268;Parent=gene291;Dbxref=Genbank:WP_001307500.1;Name=WP_001307500.1;gbkey=CDS;product=heat-shock protein C;protein_id=WP_001307500.1;transl_table=11 NZ_CP010441.1 RefSeq gene 306916 308049 . - . ID=gene292;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=SH03_RS01465;old_locus_tag=SH03_01465 NZ_CP010441.1 Protein Homology CDS 306916 308049 . - 0 ID=cds269;Parent=gene292;Dbxref=Genbank:WP_000847447.1;Name=WP_000847447.1;Note=in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS%3B with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine%2C cysteine and 1-deoxy-D-xylulose-5-phosphate%3B forms a complex with ThiG%3B contains an iron-sulfur center;gbkey=CDS;gene=thiH;product=2-iminoacetate synthase;protein_id=WP_000847447.1;transl_table=11 NZ_CP010441.1 RefSeq gene 308046 308816 . - . ID=gene293;Name=SH03_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01470;old_locus_tag=SH03_01470 NZ_CP010441.1 Protein Homology CDS 308046 308816 . - 0 ID=cds270;Parent=gene293;Dbxref=Genbank:WP_000944104.1;Name=WP_000944104.1;gbkey=CDS;product=thiazole synthase;protein_id=WP_000944104.1;transl_table=11 NZ_CP010441.1 RefSeq gene 308818 309018 . - . ID=gene294;Name=SH03_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01475;old_locus_tag=SH03_01475 NZ_CP010441.1 Protein Homology CDS 308818 309018 . - 0 ID=cds271;Parent=gene294;Dbxref=Genbank:WP_001166226.1;Name=WP_001166226.1;Note=with ThiF%2C ThiG%2C and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate;gbkey=CDS;product=thiamine biosynthesis protein ThiS;protein_id=WP_001166226.1;transl_table=11 NZ_CP010441.1 RefSeq gene 309002 309757 . - . ID=gene295;Name=SH03_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01480;old_locus_tag=SH03_01480 NZ_CP010441.1 Protein Homology CDS 309002 309757 . - 0 ID=cds272;Parent=gene295;Dbxref=Genbank:WP_000999737.1;Name=WP_000999737.1;Note=ATP-dependent adenylate transferase%2C transfers adenyl moiety to the MoeD subunit of molybdopterin synthase;gbkey=CDS;product=thiamine biosynthesis protein ThiS;protein_id=WP_000999737.1;transl_table=11 NZ_CP010441.1 RefSeq gene 309750 310385 . - . ID=gene296;Name=SH03_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01485;old_locus_tag=SH03_01485 NZ_CP010441.1 Protein Homology CDS 309750 310385 . - 0 ID=cds273;Parent=gene296;Dbxref=Genbank:WP_000284615.1;Name=WP_000284615.1;Note=catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate;gbkey=CDS;product=thiamine-phosphate synthase;protein_id=WP_000284615.1;transl_table=11 NZ_CP010441.1 RefSeq gene 310385 312280 . - . ID=gene297;Name=SH03_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01490;old_locus_tag=SH03_01490 NZ_CP010441.1 Protein Homology CDS 310385 312280 . - 0 ID=cds274;Parent=gene297;Dbxref=Genbank:WP_001276926.1;Name=WP_001276926.1;Note=catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis;gbkey=CDS;product=phosphomethylpyrimidine synthase;protein_id=WP_001276926.1;transl_table=11 NZ_CP010441.1 RefSeq gene 312513 312989 . - . ID=gene298;Name=SH03_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01495;old_locus_tag=SH03_01495 NZ_CP010441.1 Protein Homology CDS 312513 312989 . - 0 ID=cds275;Parent=gene298;Dbxref=Genbank:WP_000934302.1;Name=WP_000934302.1;Note=binds specifically to the major sigma factor sigma 70%3B active in stationary phase;gbkey=CDS;product=regulator of sigma D;protein_id=WP_000934302.1;transl_table=11 NZ_CP010441.1 RefSeq gene 313084 313857 . + . ID=gene299;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=SH03_RS01500;old_locus_tag=SH03_01500 NZ_CP010441.1 Protein Homology CDS 313084 313857 . + 0 ID=cds276;Parent=gene299;Dbxref=Genbank:WP_000373940.1;Name=WP_000373940.1;Note=can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH%3B requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates;gbkey=CDS;gene=nudC;product=NADH pyrophosphatase;protein_id=WP_000373940.1;transl_table=11 NZ_CP010441.1 RefSeq gene 313897 314961 . + . ID=gene300;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=SH03_RS01505;old_locus_tag=SH03_01505 NZ_CP010441.1 Protein Homology CDS 313897 314961 . + 0 ID=cds277;Parent=gene300;Dbxref=Genbank:WP_000137657.1;Name=WP_000137657.1;Note=catalyzes the formation of coproporphyrinogen from uroporphyrinogen III;gbkey=CDS;gene=hemE;product=uroporphyrinogen decarboxylase;protein_id=WP_000137657.1;transl_table=11 NZ_CP010441.1 RefSeq gene 314971 315642 . + . ID=gene301;Name=SH03_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01510;old_locus_tag=SH03_01510 NZ_CP010441.1 Protein Homology CDS 314971 315642 . + 0 ID=cds278;Parent=gene301;Dbxref=Genbank:WP_000362388.1;Name=WP_000362388.1;Note=Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA%3B cleaves DNA containing urea residues%2C AP sites%2C base mismatches%2C insertion/deletion mismatches%2C flaps%2C and pseudo-Y structures;gbkey=CDS;product=endonuclease V;protein_id=WP_000362388.1;transl_table=11 NZ_CP010441.1 RefSeq gene 315685 316275 . + . ID=gene302;Name=SH03_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01515;old_locus_tag=SH03_01515 NZ_CP010441.1 Protein Homology CDS 315685 316275 . + 0 ID=cds279;Parent=gene302;Dbxref=Genbank:WP_000940106.1;Name=WP_000940106.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000940106.1;transl_table=11 NZ_CP010441.1 RefSeq gene 316462 316734 . + . ID=gene303;Name=SH03_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01520;old_locus_tag=SH03_01520 NZ_CP010441.1 Protein Homology CDS 316462 316734 . + 0 ID=cds280;Parent=gene303;Dbxref=Genbank:WP_001044513.1;Name=WP_001044513.1;gbkey=CDS;product=DNA-binding protein HU-alpha;protein_id=WP_001044513.1;transl_table=11 NZ_CP010441.1 RefSeq gene 316747 317442 . + . ID=gene304;Name=SH03_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01525;old_locus_tag=SH03_01525 NZ_CP010441.1 Protein Homology CDS 316747 317442 . + 0 ID=cds281;Parent=gene304;Dbxref=Genbank:WP_001084037.1;Name=WP_001084037.1;gbkey=CDS;product=DUF1481 domain-containing protein;protein_id=WP_001084037.1;transl_table=11 NZ_CP010441.1 RefSeq gene 317444 317869 . - . ID=gene305;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=SH03_RS01530;old_locus_tag=SH03_01530 NZ_CP010441.1 Protein Homology CDS 317444 317869 . - 0 ID=cds282;Parent=gene305;Dbxref=Genbank:WP_000828222.1;Name=WP_000828222.1;gbkey=CDS;gene=zraP;product=zinc resistance-associated protein;protein_id=WP_000828222.1;transl_table=11 NZ_CP010441.1 RefSeq gene 318107 319504 . + . ID=gene306;Name=SH03_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01535;old_locus_tag=SH03_01535 NZ_CP010441.1 Protein Homology CDS 318107 319504 . + 0 ID=cds283;Parent=gene306;Dbxref=Genbank:WP_001211892.1;Name=WP_001211892.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_001211892.1;transl_table=11 NZ_CP010441.1 RefSeq gene 319501 320826 . + . ID=gene307;Name=SH03_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01540;old_locus_tag=SH03_01540 NZ_CP010441.1 Protein Homology CDS 319501 320826 . + 0 ID=cds284;Parent=gene307;Dbxref=Genbank:WP_000148503.1;Name=WP_000148503.1;Note=DNA-binding response regulator in two-component regulatory system with ZraS%3B response regulator/sigma54 interaction protein;gbkey=CDS;product=ZraR family transcriptional regulator;protein_id=WP_000148503.1;transl_table=11 NZ_CP010441.1 RefSeq gene 320823 322112 . - . ID=gene308;Name=SH03_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01545;old_locus_tag=SH03_01545 NZ_CP010441.1 Protein Homology CDS 320823 322112 . - 0 ID=cds285;Parent=gene308;Dbxref=Genbank:WP_000866800.1;Name=WP_000866800.1;Note=catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis;gbkey=CDS;product=phosphoribosylamine--glycine ligase;protein_id=WP_000866800.1;transl_table=11 NZ_CP010441.1 RefSeq gene 322124 323713 . - . ID=gene309;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=SH03_RS01550;old_locus_tag=SH03_01550 NZ_CP010441.1 Protein Homology CDS 322124 323713 . - 0 ID=cds286;Parent=gene309;Dbxref=Genbank:WP_001187559.1;Name=WP_001187559.1;Note=involved in de novo purine biosynthesis;gbkey=CDS;gene=purH;product=bifunctional purine biosynthesis protein PurH;protein_id=WP_001187559.1;transl_table=11 NZ_CP010441.1 RefSeq gene 323667 323852 . - . ID=gene310;Name=SH03_RS01555;end_range=323852,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS01555;partial=true;pseudo=true NZ_CP010441.1 Protein Homology CDS 323667 323852 . - 0 ID=cds287;Parent=gene310;end_range=323852,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 323786 323989 . - . ID=gene311;Name=SH03_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01560 NZ_CP010441.1 Protein Homology CDS 323786 323989 . - 0 ID=cds288;Parent=gene311;Dbxref=Genbank:WP_046072938.1;Name=WP_046072938.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_046072938.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 324024 329347 . + . ID=id32;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 324326 325881 . + . ID=gene312;Name=SH03_RS01565;gbkey=Gene;gene_biotype=rRNA;locus_tag=SH03_RS01565;old_locus_tag=SH03_01555 NZ_CP010441.1 RefSeq rRNA 324326 325881 . + . ID=rna23;Parent=gene312;gbkey=rRNA;product=16S ribosomal RNA NZ_CP010441.1 RefSeq exon 324326 325881 . + . ID=id33;Parent=rna23;gbkey=rRNA;product=16S ribosomal RNA NZ_CP010441.1 RefSeq gene 325955 326030 . + . ID=gene313;Name=SH03_RS01570;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS01570;old_locus_tag=SH03_01560 NZ_CP010441.1 tRNAscan-SE tRNA 325955 326030 . + . ID=rna24;Parent=gene313;anticodon=(pos:325989..325991);gbkey=tRNA;product=tRNA-Glu NZ_CP010441.1 tRNAscan-SE exon 325955 326030 . + . ID=id34;Parent=rna24;anticodon=(pos:325989..325991);gbkey=tRNA;product=tRNA-Glu NZ_CP010441.1 RefSeq gene 326215 329145 . + . ID=gene314;Name=SH03_RS01575;gbkey=Gene;gene_biotype=rRNA;locus_tag=SH03_RS01575;old_locus_tag=SH03_01565 NZ_CP010441.1 RefSeq rRNA 326215 329145 . + . ID=rna25;Parent=gene314;gbkey=rRNA;product=23S ribosomal RNA NZ_CP010441.1 RefSeq exon 326215 329145 . + . ID=id35;Parent=rna25;gbkey=rRNA;product=23S ribosomal RNA NZ_CP010441.1 RefSeq gene 329223 329338 . + . ID=gene315;Name=SH03_RS01580;gbkey=Gene;gene_biotype=rRNA;locus_tag=SH03_RS01580;old_locus_tag=SH03_01570 NZ_CP010441.1 cmsearch rRNA 329223 329338 . + . ID=rna26;Parent=gene315;gbkey=rRNA;product=5S ribosomal RNA NZ_CP010441.1 cmsearch exon 329223 329338 . + . ID=id36;Parent=rna26;gbkey=rRNA;product=5S ribosomal RNA NZ_CP010441.1 RefSeq gene 329415 329798 . + . ID=gene316;Name=SH03_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01585;old_locus_tag=SH03_01575 NZ_CP010441.1 Protein Homology CDS 329415 329798 . + 0 ID=cds289;Parent=gene316;Dbxref=Genbank:WP_001326558.1;Name=WP_001326558.1;gbkey=CDS;product=stress-induced protein;protein_id=WP_001326558.1;transl_table=11 NZ_CP010441.1 RefSeq gene 329861 330304 . - . ID=gene317;Name=SH03_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01590;old_locus_tag=SH03_01580 NZ_CP010441.1 Protein Homology CDS 329861 330304 . - 0 ID=cds290;Parent=gene317;Dbxref=Genbank:WP_000237004.1;Name=WP_000237004.1;gbkey=CDS;product=GNAT family acetyltransferase;protein_id=WP_000237004.1;transl_table=11 NZ_CP010441.1 RefSeq gene 330461 331390 . + . ID=gene318;Name=SH03_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01595;old_locus_tag=SH03_01585 NZ_CP010441.1 Protein Homology CDS 330461 331390 . + 0 ID=cds291;Parent=gene318;Dbxref=Genbank:WP_001122779.1;Name=WP_001122779.1;Note=catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis;gbkey=CDS;product=homoserine O-succinyltransferase;protein_id=WP_001122779.1;transl_table=11 NZ_CP010441.1 RefSeq gene 331659 333260 . + . ID=gene319;Name=SH03_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01600;old_locus_tag=SH03_01590 NZ_CP010441.1 Protein Homology CDS 331659 333260 . + 0 ID=cds292;Parent=gene319;Dbxref=Genbank:WP_000138905.1;Name=WP_000138905.1;Note=Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle;gbkey=CDS;product=malate synthase A;protein_id=WP_000138905.1;transl_table=11 NZ_CP010441.1 RefSeq gene 333290 334594 . + . ID=gene320;Name=SH03_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01605;old_locus_tag=SH03_01595 NZ_CP010441.1 Protein Homology CDS 333290 334594 . + 0 ID=cds293;Parent=gene320;Dbxref=Genbank:WP_000857856.1;Name=WP_000857856.1;gbkey=CDS;product=isocitrate lyase;protein_id=WP_000857856.1;transl_table=11 NZ_CP010441.1 RefSeq gene 334777 336513 . + . ID=gene321;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=SH03_RS01610;old_locus_tag=SH03_01600 NZ_CP010441.1 Protein Homology CDS 334777 336513 . + 0 ID=cds294;Parent=gene321;Dbxref=Genbank:WP_001137220.1;Name=WP_001137220.1;Note=catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity%3B unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol;gbkey=CDS;gene=aceK;product=isocitrate dehydrogenase;protein_id=WP_001137220.1;transl_table=11 NZ_CP010441.1 RefSeq gene 336482 338668 . - . ID=gene322;Name=SH03_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01615;old_locus_tag=SH03_01605 NZ_CP010441.1 Protein Homology CDS 336482 338668 . - 0 ID=cds295;Parent=gene322;Dbxref=Genbank:WP_000632913.1;Name=WP_000632913.1;gbkey=CDS;product=ankyrin repeat protein A;protein_id=WP_000632913.1;transl_table=11 NZ_CP010441.1 RefSeq gene 338985 339809 . - . ID=gene323;Name=SH03_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01620;old_locus_tag=SH03_01610 NZ_CP010441.1 Protein Homology CDS 338985 339809 . - 0 ID=cds296;Parent=gene323;Dbxref=Genbank:WP_000226403.1;Name=WP_000226403.1;Note=regulates the glyoxylate bypass operon (aceBAK)%2C which encodes isocitrate lyase%2C malate synthase and isocitrate dehydrogenase kinase/phosphorylase;gbkey=CDS;product=acetate operon repressor;protein_id=WP_000226403.1;transl_table=11 NZ_CP010441.1 RefSeq gene 340009 343692 . + . ID=gene324;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=SH03_RS01625;old_locus_tag=SH03_01615 NZ_CP010441.1 Protein Homology CDS 340009 343692 . + 0 ID=cds297;Parent=gene324;Dbxref=Genbank:WP_000096011.1;Name=WP_000096011.1;Note=one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity;gbkey=CDS;gene=metH;product=methionine synthase;protein_id=WP_000096011.1;transl_table=11 NZ_CP010441.1 RefSeq gene 343912 345543 . + . ID=gene325;Name=SH03_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01630;old_locus_tag=SH03_01620 NZ_CP010441.1 Protein Homology CDS 343912 345543 . + 0 ID=cds298;Parent=gene325;Dbxref=Genbank:WP_000956830.1;Name=WP_000956830.1;gbkey=CDS;product=transporter;protein_id=WP_000956830.1;transl_table=11 NZ_CP010441.1 RefSeq gene 345634 346323 . - . ID=gene326;Name=SH03_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01635;old_locus_tag=SH03_01625 NZ_CP010441.1 Protein Homology CDS 345634 346323 . - 0 ID=cds299;Parent=gene326;Dbxref=Genbank:WP_000421763.1;Name=WP_000421763.1;Note=peptidase E%3B catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue%3B belongs to peptidase S51 family;gbkey=CDS;product=peptidase E;protein_id=WP_000421763.1;transl_table=11 NZ_CP010441.1 RefSeq gene 346535 347407 . + . ID=gene327;Name=SH03_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01640;old_locus_tag=SH03_01630 NZ_CP010441.1 Protein Homology CDS 346535 347407 . + 0 ID=cds300;Parent=gene327;Dbxref=Genbank:WP_000936377.1;Name=WP_000936377.1;Note=catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase F;protein_id=WP_000936377.1;transl_table=11 NZ_CP010441.1 RefSeq gene 347540 347812 . - . ID=gene328;Name=SH03_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01645;old_locus_tag=SH03_01635 NZ_CP010441.1 Protein Homology CDS 347540 347812 . - 0 ID=cds301;Parent=gene328;Dbxref=Genbank:WP_001207634.1;Name=WP_001207634.1;gbkey=CDS;product=DUF3811 domain-containing protein;protein_id=WP_001207634.1;transl_table=11 NZ_CP010441.1 RefSeq gene 348065 349414 . - . ID=gene329;Name=SH03_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01650;old_locus_tag=SH03_01640 NZ_CP010441.1 Protein Homology CDS 348065 349414 . - 0 ID=cds302;Parent=gene329;Dbxref=Genbank:WP_001290310.1;Name=WP_001290310.1;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive;gbkey=CDS;product=lysine-sensitive aspartokinase 3;protein_id=WP_001290310.1;transl_table=11 NZ_CP010441.1 RefSeq gene 349939 351588 . + . ID=gene330;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=SH03_RS01655;old_locus_tag=SH03_01645 NZ_CP010441.1 Protein Homology CDS 349939 351588 . + 0 ID=cds303;Parent=gene330;Dbxref=Genbank:WP_000789986.1;Name=WP_000789986.1;Note=functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family;gbkey=CDS;gene=pgi;product=glucose-6-phosphate isomerase;protein_id=WP_000789986.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 351695 352464 . + . ID=id37;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 351711 352214 . - . ID=gene331;Name=SH03_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01660;old_locus_tag=SH03_01650 NZ_CP010441.1 Protein Homology CDS 351711 352214 . - 0 ID=cds304;Parent=gene331;Dbxref=Genbank:WP_001119362.1;Name=WP_001119362.1;gbkey=CDS;product=transposase;protein_id=WP_001119362.1;transl_table=11 NZ_CP010441.1 RefSeq gene 352133 352408 . - . ID=gene332;Name=SH03_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01665;old_locus_tag=SH03_01655 NZ_CP010441.1 Protein Homology CDS 352133 352408 . - 0 ID=cds305;Parent=gene332;Dbxref=Genbank:WP_000179213.1;Name=WP_000179213.1;gbkey=CDS;product=repressor TnpA;protein_id=WP_000179213.1;transl_table=11 NZ_CP010441.1 RefSeq gene 352864 353106 . + . ID=gene333;Name=SH03_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01670;old_locus_tag=SH03_01660 NZ_CP010441.1 Protein Homology CDS 352864 353106 . + 0 ID=cds306;Parent=gene333;Dbxref=Genbank:WP_000757333.1;Name=WP_000757333.1;gbkey=CDS;product=polysaccharide production threonine-rich protein;protein_id=WP_000757333.1;transl_table=11 NZ_CP010441.1 RefSeq gene 353220 353858 . + . ID=gene334;Name=SH03_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01675;old_locus_tag=SH03_01665 NZ_CP010441.1 Protein Homology CDS 353220 353858 . + 0 ID=cds307;Parent=gene334;Dbxref=Genbank:WP_001295278.1;Name=WP_001295278.1;gbkey=CDS;product=polysaccharide production lipoprotein;protein_id=WP_001295278.1;transl_table=11 NZ_CP010441.1 RefSeq gene 353855 354592 . + . ID=gene335;Name=SH03_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01680;old_locus_tag=SH03_01670 NZ_CP010441.1 Protein Homology CDS 353855 354592 . + 0 ID=cds308;Parent=gene335;Dbxref=Genbank:WP_000595558.1;Name=WP_000595558.1;gbkey=CDS;product=polysaccharide export OMA protein;protein_id=WP_000595558.1;transl_table=11 NZ_CP010441.1 RefSeq gene 354592 356688 . + . ID=gene336;Name=SH03_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01685;old_locus_tag=SH03_01675 NZ_CP010441.1 Protein Homology CDS 354592 356688 . + 0 ID=cds309;Parent=gene336;Dbxref=Genbank:WP_000745776.1;Name=WP_000745776.1;gbkey=CDS;product=DUF940 domain-containing protein;protein_id=WP_000745776.1;transl_table=11 NZ_CP010441.1 RefSeq gene 356735 357013 . - . ID=gene337;Name=SH03_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01690;old_locus_tag=SH03_01680 NZ_CP010441.1 Protein Homology CDS 356735 357013 . - 0 ID=cds310;Parent=gene337;Dbxref=Genbank:WP_001295279.1;Name=WP_001295279.1;gbkey=CDS;product=periplasmic protein;protein_id=WP_001295279.1;transl_table=11 NZ_CP010441.1 RefSeq gene 357014 357157 . + . ID=gene338;Name=SH03_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01695;old_locus_tag=SH03_01685 NZ_CP010441.1 Protein Homology CDS 357014 357157 . + 0 ID=cds311;Parent=gene338;Dbxref=Genbank:WP_000487766.1;Name=WP_000487766.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000487766.1;transl_table=11 NZ_CP010441.1 RefSeq gene 357283 357693 . + . ID=gene339;Name=SH03_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01700;old_locus_tag=SH03_01695 NZ_CP010441.1 Protein Homology CDS 357283 357693 . + 0 ID=cds312;Parent=gene339;Dbxref=Genbank:WP_000202902.1;Name=WP_000202902.1;gbkey=CDS;product=protein PsiE;protein_id=WP_000202902.1;transl_table=11 NZ_CP010441.1 RefSeq gene 357737 359212 . - . ID=gene340;Name=xylE;gbkey=Gene;gene=xylE;gene_biotype=protein_coding;locus_tag=SH03_RS01705;old_locus_tag=SH03_01700 NZ_CP010441.1 Protein Homology CDS 357737 359212 . - 0 ID=cds313;Parent=gene340;Dbxref=Genbank:WP_001097274.1;Name=WP_001097274.1;Note=xylose/proton symporter%3B member of the major facilitator superfamily (MFS) of transporter;gbkey=CDS;gene=xylE;product=D-xylose-proton symporter;protein_id=WP_001097274.1;transl_table=11 NZ_CP010441.1 RefSeq gene 359584 360474 . - . ID=gene341;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=SH03_RS01710;old_locus_tag=SH03_01705 NZ_CP010441.1 Protein Homology CDS 359584 360474 . - 0 ID=cds314;Parent=gene341;Dbxref=Genbank:WP_001252058.1;Name=WP_001252058.1;Note=with MalKFE is involved in the transport of maltose into the cell;gbkey=CDS;gene=malG;product=maltose ABC transporter permease;protein_id=WP_001252058.1;transl_table=11 NZ_CP010441.1 RefSeq gene 360489 362033 . - . ID=gene342;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=SH03_RS01715;old_locus_tag=SH03_01710 NZ_CP010441.1 Protein Homology CDS 360489 362033 . - 0 ID=cds315;Parent=gene342;Dbxref=Genbank:WP_001297290.1;Name=WP_001297290.1;Note=with MalKGE is involved in maltose transport into the cell;gbkey=CDS;gene=malF;product=maltose ABC transporter permease;protein_id=WP_001297290.1;transl_table=11 NZ_CP010441.1 RefSeq gene 362187 363377 . - . ID=gene343;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=SH03_RS01720;old_locus_tag=SH03_01715 NZ_CP010441.1 Protein Homology CDS 362187 363377 . - 0 ID=cds316;Parent=gene343;Dbxref=Genbank:WP_000695387.1;Name=WP_000695387.1;Note=functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis;gbkey=CDS;gene=malE;product=maltose-binding periplasmic protein;protein_id=WP_000695387.1;transl_table=11 NZ_CP010441.1 RefSeq gene 363470 363565 . - . ID=gene344;Name=SH03_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01725;old_locus_tag=SH03_01720 NZ_CP010441.1 Protein Homology CDS 363470 363565 . - 0 ID=cds317;Parent=gene344;Dbxref=Genbank:WP_000922710.1;Name=WP_000922710.1;gbkey=CDS;product=sugar ABC transporter;protein_id=WP_000922710.1;transl_table=11 NZ_CP010441.1 RefSeq gene 363742 364857 . + . ID=gene345;Name=SH03_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01730;old_locus_tag=SH03_01725 NZ_CP010441.1 Protein Homology CDS 363742 364857 . + 0 ID=cds318;Parent=gene345;Dbxref=Genbank:WP_000179165.1;Name=WP_000179165.1;Note=with malEFG is involved in import of maltose/maltodextrin;gbkey=CDS;product=maltose/maltodextrin import ATP-binding protein MalK;protein_id=WP_000179165.1;transl_table=11 NZ_CP010441.1 RefSeq gene 364929 366269 . + . ID=gene346;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;locus_tag=SH03_RS01735;old_locus_tag=SH03_01730 NZ_CP010441.1 Protein Homology CDS 364929 366269 . + 0 ID=cds319;Parent=gene346;Dbxref=Genbank:WP_000973663.1;Name=WP_000973663.1;Note=porin involved in the transport of maltose and maltodextrins;gbkey=CDS;gene=lamB;product=maltoporin;protein_id=WP_000973663.1;transl_table=11 NZ_CP010441.1 RefSeq gene 366512 367432 . + . ID=gene347;Name=SH03_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01740;old_locus_tag=SH03_01735 NZ_CP010441.1 Protein Homology CDS 366512 367432 . + 0 ID=cds320;Parent=gene347;Dbxref=Genbank:WP_001326641.1;Name=WP_001326641.1;gbkey=CDS;product=maltose operon periplasmic protein;protein_id=WP_001326641.1;transl_table=11 NZ_CP010441.1 RefSeq gene 367661 367855 . + . ID=gene348;Name=SH03_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01745;old_locus_tag=SH03_01740 NZ_CP010441.1 Protein Homology CDS 367661 367855 . + 0 ID=cds321;Parent=gene348;Dbxref=Genbank:WP_000623313.1;Name=WP_000623313.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000623313.1;transl_table=11 NZ_CP010441.1 RefSeq gene 367913 369241 . + . ID=gene349;Name=SH03_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01750;old_locus_tag=SH03_01745 NZ_CP010441.1 Protein Homology CDS 367913 369241 . + 0 ID=cds322;Parent=gene349;Dbxref=Genbank:WP_001311302.1;Name=WP_001311302.1;Note=in E. coli%2C some yjbl mutations have been reported as suppressors of dnaG mutations;gbkey=CDS;product=hypothetical protein;protein_id=WP_001311302.1;transl_table=11 NZ_CP010441.1 RefSeq gene 369464 369961 . + . ID=gene350;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=SH03_RS01755;old_locus_tag=SH03_01750 NZ_CP010441.1 Protein Homology CDS 369464 369961 . + 0 ID=cds323;Parent=gene350;Dbxref=Genbank:WP_001326644.1;Name=WP_001326644.1;Note=catalyzes the formation of 4-hydroxybenzoate from chorismate;gbkey=CDS;gene=ubiC;product=Chorismate pyruvate-lyase;protein_id=WP_001326644.1;transl_table=11 NZ_CP010441.1 RefSeq gene 369974 370846 . + . ID=gene351;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=SH03_RS01760;old_locus_tag=SH03_01755 NZ_CP010441.1 Protein Homology CDS 369974 370846 . + 0 ID=cds324;Parent=gene351;Dbxref=Genbank:WP_000455227.1;Name=WP_000455227.1;Note=catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway;gbkey=CDS;gene=ubiA;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_000455227.1;transl_table=11 NZ_CP010441.1 RefSeq gene 371001 373424 . - . ID=gene352;Name=SH03_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01765;old_locus_tag=SH03_01760 NZ_CP010441.1 Protein Homology CDS 371001 373424 . - 0 ID=cds325;Parent=gene352;Dbxref=Genbank:WP_000017354.1;Name=WP_000017354.1;Note=PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA;gbkey=CDS;product=glycerol-3-phosphate acyltransferase;protein_id=WP_000017354.1;transl_table=11 NZ_CP010441.1 RefSeq gene 373595 373963 . + . ID=gene353;Name=SH03_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01770;old_locus_tag=SH03_01765 NZ_CP010441.1 Protein Homology CDS 373595 373963 . + 0 ID=cds326;Parent=gene353;Dbxref=Genbank:WP_000002907.1;Name=WP_000002907.1;Note=catalyzes the phosphorylation of diacylglycerol to form diacylglycerol phosphate;gbkey=CDS;product=diacylglycerol kinase;protein_id=WP_000002907.1;transl_table=11 NZ_CP010441.1 RefSeq gene 374073 374681 . + . ID=gene354;Name=SH03_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01775;old_locus_tag=SH03_01770 NZ_CP010441.1 Protein Homology CDS 374073 374681 . + 0 ID=cds327;Parent=gene354;Dbxref=Genbank:WP_000646078.1;Name=WP_000646078.1;Note=Represses a number of genes involved in the response to DNA damage;gbkey=CDS;product=LexA repressor;protein_id=WP_000646078.1;transl_table=11 NZ_CP010441.1 RefSeq gene 374754 376079 . + . ID=gene355;Name=SH03_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01780;old_locus_tag=SH03_01775 NZ_CP010441.1 Protein Homology CDS 374754 376079 . + 0 ID=cds328;Parent=gene355;Dbxref=Genbank:WP_001326646.1;Name=WP_001326646.1;gbkey=CDS;product=MATE family efflux transporter;protein_id=WP_001326646.1;transl_table=11 NZ_CP010441.1 RefSeq gene 376195 376404 . + . ID=gene356;Name=SH03_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01785;old_locus_tag=SH03_01780 NZ_CP010441.1 Protein Homology CDS 376195 376404 . + 0 ID=cds329;Parent=gene356;Dbxref=Genbank:WP_001030593.1;Name=WP_001030593.1;gbkey=CDS;product=stress-induced protein%2C UPF0337 family;protein_id=WP_001030593.1;transl_table=11 NZ_CP010441.1 RefSeq gene 376446 376961 . - . ID=gene357;Name=SH03_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01790;old_locus_tag=SH03_01785 NZ_CP010441.1 Protein Homology CDS 376446 376961 . - 0 ID=cds330;Parent=gene357;Dbxref=Genbank:WP_001295691.1;Name=WP_001295691.1;Note=Acts as a negative controlling element%2C employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB;gbkey=CDS;product=zinc uptake regulation protein;protein_id=WP_001295691.1;transl_table=11 NZ_CP010441.1 RefSeq gene 377279 377533 . + . ID=gene358;Name=SH03_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01795;old_locus_tag=SH03_01790 NZ_CP010441.1 Protein Homology CDS 377279 377533 . + 0 ID=cds331;Parent=gene358;Dbxref=Genbank:WP_000912571.1;Name=WP_000912571.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000912571.1;transl_table=11 NZ_CP010441.1 RefSeq gene 377557 378264 . + . ID=gene359;Name=SH03_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01800;old_locus_tag=SH03_01795 NZ_CP010441.1 Protein Homology CDS 377557 378264 . + 0 ID=cds332;Parent=gene359;Dbxref=Genbank:WP_001311303.1;Name=WP_001311303.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001311303.1;transl_table=11 NZ_CP010441.1 RefSeq gene 378672 379664 . + . ID=gene360;Name=SH03_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01805;old_locus_tag=SH03_01800 NZ_CP010441.1 Protein Homology CDS 378672 379664 . + 0 ID=cds333;Parent=gene360;Dbxref=Genbank:WP_001307511.1;Name=WP_001307511.1;gbkey=CDS;product=tRNA-dihydrouridine synthase A;protein_id=WP_001307511.1;transl_table=11 NZ_CP010441.1 RefSeq gene 379798 380040 . + . ID=gene361;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=SH03_RS01810;old_locus_tag=SH03_01805 NZ_CP010441.1 Protein Homology CDS 379798 380040 . + 0 ID=cds334;Parent=gene361;Dbxref=Genbank:WP_000891404.1;Name=WP_000891404.1;Note=coordinately regulated along with pspA%3B PspF-dependent induction in response to secretin overexpression in Yersinia;gbkey=CDS;gene=pspG;product=phage shock protein G;protein_id=WP_000891404.1;transl_table=11 NZ_CP010441.1 RefSeq gene 380206 381189 . - . ID=gene362;Name=SH03_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01815;old_locus_tag=SH03_01810 NZ_CP010441.1 Protein Homology CDS 380206 381189 . - 0 ID=cds335;Parent=gene362;Dbxref=Genbank:WP_000235508.1;Name=WP_000235508.1;gbkey=CDS;product=quinone oxidoreductase 1;protein_id=WP_000235508.1;transl_table=11 NZ_CP010441.1 RefSeq gene 381272 382687 . + . ID=gene363;Name=SH03_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01820;old_locus_tag=SH03_01815 NZ_CP010441.1 Protein Homology CDS 381272 382687 . + 0 ID=cds336;Parent=gene363;Dbxref=Genbank:WP_000918363.1;Name=WP_000918363.1;Note=unwinds double stranded DNA;gbkey=CDS;product=replicative DNA helicase;protein_id=WP_000918363.1;transl_table=11 NZ_CP010441.1 RefSeq gene 382740 383819 . + . ID=gene364;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=SH03_RS01825;old_locus_tag=SH03_01820 NZ_CP010441.1 Protein Homology CDS 382740 383819 . + 0 ID=cds337;Parent=gene364;Dbxref=Genbank:WP_001147328.1;Name=WP_001147328.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;gene=alr;product=alanine racemase biosynthetic;protein_id=WP_001147328.1;transl_table=11 NZ_CP010441.1 RefSeq gene 384072 385265 . + . ID=gene365;Name=SH03_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01830;old_locus_tag=SH03_01825 NZ_CP010441.1 Protein Homology CDS 384072 385265 . + 0 ID=cds338;Parent=gene365;Dbxref=Genbank:WP_000486985.1;Name=WP_000486985.1;Note=catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate;gbkey=CDS;product=aromatic-amino-acid aminotransferase;protein_id=WP_000486985.1;transl_table=11 NZ_CP010441.1 RefSeq gene 385487 385970 . - . ID=gene366;Name=SH03_RS01835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS01835;pseudo=true NZ_CP010441.1 Protein Homology CDS 385487 385970 . - 0 ID=cds339;Parent=gene366;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 386372 387085 . + . ID=gene367;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=SH03_RS01840;old_locus_tag=SH03_01835 NZ_CP010441.1 Protein Homology CDS 386372 387085 . + 0 ID=cds340;Parent=gene367;Dbxref=Genbank:WP_001226928.1;Name=WP_001226928.1;Note=Class B%3B non-specific%3B catalyzes the dephosphorylation of organic phosphomonoesters%3B also has phosphotransferase activity;gbkey=CDS;gene=aphA;product=class B acid phosphatase;protein_id=WP_001226928.1;transl_table=11 NZ_CP010441.1 RefSeq gene 387196 387612 . + . ID=gene368;Name=SH03_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01845;old_locus_tag=SH03_01840 NZ_CP010441.1 Protein Homology CDS 387196 387612 . + 0 ID=cds341;Parent=gene368;Dbxref=Genbank:WP_000270375.1;Name=WP_000270375.1;gbkey=CDS;product=thiamin phosphate synthase;protein_id=WP_000270375.1;transl_table=11 NZ_CP010441.1 RefSeq gene 387616 387972 . + . ID=gene369;Name=SH03_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01850;old_locus_tag=SH03_01845 NZ_CP010441.1 Protein Homology CDS 387616 387972 . + 0 ID=cds342;Parent=gene369;Dbxref=Genbank:WP_000155657.1;Name=WP_000155657.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000155657.1;transl_table=11 NZ_CP010441.1 RefSeq gene 388007 390829 . - . ID=gene370;Name=SH03_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01855;old_locus_tag=SH03_01850 NZ_CP010441.1 Protein Homology CDS 388007 390829 . - 0 ID=cds343;Parent=gene370;Dbxref=Genbank:WP_000357740.1;Name=WP_000357740.1;gbkey=CDS;product=UvrABC system protein A;protein_id=WP_000357740.1;transl_table=11 NZ_CP010441.1 RefSeq gene 391083 391619 . + . ID=gene371;Name=SH03_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01860;old_locus_tag=SH03_01855 NZ_CP010441.1 Protein Homology CDS 391083 391619 . + 0 ID=cds344;Parent=gene371;Dbxref=Genbank:WP_000168305.1;Name=WP_000168305.1;Note=binds to single stranded DNA and PriA helcase facilitate replication restart;gbkey=CDS;product=single-stranded DNA-binding protein;protein_id=WP_000168305.1;transl_table=11 NZ_CP010441.1 RefSeq gene 391718 391999 . - . ID=gene372;Name=SH03_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01865;old_locus_tag=SH03_01860 NZ_CP010441.1 Protein Homology CDS 391718 391999 . - 0 ID=cds345;Parent=gene372;Dbxref=Genbank:WP_001295689.1;Name=WP_001295689.1;gbkey=CDS;product=membrane protein;protein_id=WP_001295689.1;transl_table=11 NZ_CP010441.1 RefSeq gene 392429 394015 . + . ID=gene373;Name=SH03_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01870;old_locus_tag=SH03_01865 NZ_CP010441.1 Protein Homology CDS 392429 394015 . + 0 ID=cds346;Parent=gene373;Dbxref=Genbank:WP_000019548.1;Name=WP_000019548.1;gbkey=CDS;product=cyclic-di-GMP phosphodiesterase;protein_id=WP_000019548.1;transl_table=11 NZ_CP010441.1 RefSeq gene 394018 394341 . - . ID=gene374;Name=SH03_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01875;old_locus_tag=SH03_01870 NZ_CP010441.1 Protein Homology CDS 394018 394341 . - 0 ID=cds347;Parent=gene374;Dbxref=Genbank:WP_000019358.1;Name=WP_000019358.1;Note=regulates genes involved in response to oxidative stress;gbkey=CDS;product=regulatory protein SoxS;protein_id=WP_000019358.1;transl_table=11 NZ_CP010441.1 RefSeq gene 394427 394891 . + . ID=gene375;Name=SH03_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01880;old_locus_tag=SH03_01875 NZ_CP010441.1 Protein Homology CDS 394427 394891 . + 0 ID=cds348;Parent=gene375;Dbxref=Genbank:WP_000412428.1;Name=WP_000412428.1;gbkey=CDS;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412428.1;transl_table=11 NZ_CP010441.1 RefSeq gene 395437 396786 . + . ID=gene376;Name=SH03_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01885;old_locus_tag=SH03_01880 NZ_CP010441.1 Protein Homology CDS 395437 396786 . + 0 ID=cds349;Parent=gene376;Dbxref=Genbank:WP_000106882.1;Name=WP_000106882.1;gbkey=CDS;product=guanine/hypoxanthine permease GhxP;protein_id=WP_000106882.1;transl_table=11 NZ_CP010441.1 RefSeq gene 396938 398587 . + . ID=gene377;Name=SH03_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01890;old_locus_tag=SH03_01885 NZ_CP010441.1 Protein Homology CDS 396938 398587 . + 0 ID=cds350;Parent=gene377;Dbxref=Genbank:WP_000402210.1;Name=WP_000402210.1;gbkey=CDS;product=cation/proton antiporter;protein_id=WP_000402210.1;transl_table=11 NZ_CP010441.1 RefSeq gene 398741 400033 . - . ID=gene378;Name=SH03_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01895;old_locus_tag=SH03_01890 NZ_CP010441.1 Protein Homology CDS 398741 400033 . - 0 ID=cds351;Parent=gene378;Dbxref=Genbank:WP_001270094.1;Name=WP_001270094.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001270094.1;transl_table=11 NZ_CP010441.1 RefSeq gene 400211 401860 . - . ID=gene379;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=SH03_RS01900;old_locus_tag=SH03_01895 NZ_CP010441.1 Protein Homology CDS 400211 401860 . - 0 ID=cds352;Parent=gene379;Dbxref=Genbank:WP_000832573.1;Name=WP_000832573.1;Note=member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake;gbkey=CDS;gene=actP;product=cation/acetate symporter ActP;protein_id=WP_000832573.1;transl_table=11 NZ_CP010441.1 RefSeq gene 401857 402171 . - . ID=gene380;Name=SH03_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01905;old_locus_tag=SH03_01900 NZ_CP010441.1 Protein Homology CDS 401857 402171 . - 0 ID=cds353;Parent=gene380;Dbxref=Genbank:WP_001014565.1;Name=WP_001014565.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001014565.1;transl_table=11 NZ_CP010441.1 RefSeq gene 402371 404329 . - . ID=gene381;Name=SH03_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01910;old_locus_tag=SH03_01905 NZ_CP010441.1 Protein Homology CDS 402371 404329 . - 0 ID=cds354;Parent=gene381;Dbxref=Genbank:WP_000078239.1;Name=WP_000078239.1;Note=Acs%3B catalyzes the conversion of acetate and CoA to acetyl-CoA;gbkey=CDS;product=acetyl-CoA synthetase;protein_id=WP_000078239.1;transl_table=11 NZ_CP010441.1 RefSeq gene 404722 406158 . + . ID=gene382;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=SH03_RS01915;old_locus_tag=SH03_01910 NZ_CP010441.1 Protein Homology CDS 404722 406158 . + 0 ID=cds355;Parent=gene382;Dbxref=Genbank:WP_000196875.1;Name=WP_000196875.1;Note=catalyzes the formate-dependent reduction of nitrite to ammonia%3B cytochrome C552;gbkey=CDS;gene=nrfA;product=cytochrome c-552;protein_id=WP_000196875.1;transl_table=11 NZ_CP010441.1 RefSeq gene 406203 406769 . + . ID=gene383;Name=SH03_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01920;old_locus_tag=SH03_01915 NZ_CP010441.1 Protein Homology CDS 406203 406769 . + 0 ID=cds356;Parent=gene383;Dbxref=Genbank:WP_001295391.1;Name=WP_001295391.1;Note=part of nitrite reductase complex%3B NrfB is active at high nitrate conditions%3B NrfA%2C B%2C C%2C and D are essential for the formate-dependent nitrite reduction to ammonia;gbkey=CDS;product=cytochrome c-type protein NrfB;protein_id=WP_001295391.1;transl_table=11 NZ_CP010441.1 RefSeq gene 406766 407437 . + . ID=gene384;Name=SH03_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01925;old_locus_tag=SH03_01920 NZ_CP010441.1 Protein Homology CDS 406766 407437 . + 0 ID=cds357;Parent=gene384;Dbxref=Genbank:WP_000220281.1;Name=WP_000220281.1;Note=4Fe4S subunit%3B may be involved in the transfer of electrons from quinones to the c-type cytochromes;gbkey=CDS;product=protein NrfC;protein_id=WP_000220281.1;transl_table=11 NZ_CP010441.1 RefSeq gene 407434 408390 . + . ID=gene385;Name=SH03_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01930;old_locus_tag=SH03_01925 NZ_CP010441.1 Protein Homology CDS 407434 408390 . + 0 ID=cds358;Parent=gene385;Dbxref=Genbank:WP_000195171.1;Name=WP_000195171.1;Note=membrane protein%2C may be involved in the transfer of electrons from quinones to c-type cytochromes;gbkey=CDS;product=protein NrfD;protein_id=WP_000195171.1;transl_table=11 NZ_CP010441.1 RefSeq gene 408521 410128 . + . ID=gene386;Name=SH03_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01935;old_locus_tag=SH03_01930 NZ_CP010441.1 Protein Homology CDS 408521 410128 . + 0 ID=cds359;Parent=gene386;Dbxref=Genbank:WP_001326651.1;Name=WP_001326651.1;Note=with NrfF and NrfG catalyzes the insertion of heme into cytochrome c552;gbkey=CDS;product=heme lyase subunit NrfE;protein_id=WP_001326651.1;transl_table=11 NZ_CP010441.1 RefSeq gene 410121 410504 . + . ID=gene387;Name=SH03_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01940;old_locus_tag=SH03_01935 NZ_CP010441.1 Protein Homology CDS 410121 410504 . + 0 ID=cds360;Parent=gene387;Dbxref=Genbank:WP_001032531.1;Name=WP_001032531.1;gbkey=CDS;product=formate-dependent nitrite reductase complex subunit NrfF;protein_id=WP_001032531.1;transl_table=11 NZ_CP010441.1 RefSeq gene 410501 411097 . + . ID=gene388;Name=SH03_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01945;old_locus_tag=SH03_01940 NZ_CP010441.1 Protein Homology CDS 410501 411097 . + 0 ID=cds361;Parent=gene388;Dbxref=Genbank:WP_000812896.1;Name=WP_000812896.1;gbkey=CDS;product=formate-dependent nitrite reductase complex subunit NrfG;protein_id=WP_000812896.1;transl_table=11 NZ_CP010441.1 RefSeq gene 411439 412752 . + . ID=gene389;Name=SH03_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01950;old_locus_tag=SH03_01945 NZ_CP010441.1 Protein Homology CDS 411439 412752 . + 0 ID=cds362;Parent=gene389;Dbxref=Genbank:WP_000789592.1;Name=WP_000789592.1;gbkey=CDS;product=proton glutamate symport protein;protein_id=WP_000789592.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 412793 413280 . + . ID=id38;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 413283 413972 . - . ID=gene390;Name=SH03_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01955;old_locus_tag=SH03_01950 NZ_CP010441.1 Protein Homology CDS 413283 413972 . - 0 ID=cds363;Parent=gene390;Dbxref=Genbank:WP_038432727.1;Name=WP_038432727.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038432727.1;transl_table=11 NZ_CP010441.1 RefSeq gene 414066 415745 . - . ID=gene391;Name=SH03_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01960;old_locus_tag=SH03_01955 NZ_CP010441.1 Protein Homology CDS 414066 415745 . - 0 ID=cds364;Parent=gene391;Dbxref=Genbank:WP_000063439.1;Name=WP_000063439.1;gbkey=CDS;product=formate dehydrogenase subunit alpha;protein_id=WP_000063439.1;transl_table=11 NZ_CP010441.1 RefSeq gene 415794 416213 . - . ID=gene392;Name=SH03_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01965;old_locus_tag=SH03_01960 NZ_CP010441.1 Protein Homology CDS 415794 416213 . - 0 ID=cds365;Parent=gene392;Dbxref=Genbank:WP_000758300.1;Name=WP_000758300.1;gbkey=CDS;product=spermidine/putrescine ABC transporter substrate-binding protein;protein_id=WP_000758300.1;transl_table=11 NZ_CP010441.1 RefSeq gene 416411 417877 . - . ID=gene393;Name=SH03_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01970;old_locus_tag=SH03_01965 NZ_CP010441.1 Protein Homology CDS 416411 417877 . - 0 ID=cds366;Parent=gene393;Dbxref=Genbank:WP_000610601.1;Name=WP_000610601.1;Note=part of a multidrug efflux system involved in resistance to acriflavin%2C puromycin%2C erytjhromycin and tetraphenylarsonium chloride%3B member of the outer membrane factor (OMF) family;gbkey=CDS;product=multidrug resistance outer membrane protein MdtP;protein_id=WP_000610601.1;transl_table=11 NZ_CP010441.1 RefSeq gene 417874 419925 . - . ID=gene394;Name=SH03_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01975;old_locus_tag=SH03_01970 NZ_CP010441.1 Protein Homology CDS 417874 419925 . - 0 ID=cds367;Parent=gene394;Dbxref=Genbank:WP_001275207.1;Name=WP_001275207.1;Note=possibly part of a tripartite efflux system composed of MdtN%2C MdtO and MdtP which could be involved in resistance to puromycin%2C acriflavine and tetraphenylarsonium chloride;gbkey=CDS;product=multidrug resistance protein MdtO;protein_id=WP_001275207.1;transl_table=11 NZ_CP010441.1 RefSeq gene 419925 420956 . - . ID=gene395;Name=SH03_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01980;old_locus_tag=SH03_01975 NZ_CP010441.1 Protein Homology CDS 419925 420956 . - 0 ID=cds368;Parent=gene395;Dbxref=Genbank:WP_000446378.1;Name=WP_000446378.1;Note=with MdtO and MdtP is involved in resistance to puromycin%2C acriflavine and tetraphenylarsonium chloride;gbkey=CDS;product=multidrug resistance protein MdtN;protein_id=WP_000446378.1;transl_table=11 NZ_CP010441.1 RefSeq gene 420975 421250 . - . ID=gene396;Name=SH03_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01985;old_locus_tag=SH03_01980 NZ_CP010441.1 Protein Homology CDS 420975 421250 . - 0 ID=cds369;Parent=gene396;Dbxref=Genbank:WP_001295389.1;Name=WP_001295389.1;gbkey=CDS;product=transporter;protein_id=WP_001295389.1;transl_table=11 NZ_CP010441.1 RefSeq gene 421459 423444 . - . ID=gene397;Name=SH03_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01990;old_locus_tag=SH03_01985 NZ_CP010441.1 Protein Homology CDS 421459 423444 . - 0 ID=cds370;Parent=gene397;Dbxref=Genbank:WP_001066019.1;Name=WP_001066019.1;gbkey=CDS;product=MBL fold hydrolase;protein_id=WP_001066019.1;transl_table=11 NZ_CP010441.1 RefSeq gene 423717 424646 . - . ID=gene398;Name=SH03_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS01995;old_locus_tag=SH03_01990 NZ_CP010441.1 Protein Homology CDS 423717 424646 . - 0 ID=cds371;Parent=gene398;Dbxref=Genbank:WP_001171687.1;Name=WP_001171687.1;gbkey=CDS;product=D-allose kinase;protein_id=WP_001171687.1;transl_table=11 NZ_CP010441.1 RefSeq gene 424630 425325 . - . ID=gene399;Name=SH03_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02000;old_locus_tag=SH03_01995 NZ_CP010441.1 Protein Homology CDS 424630 425325 . - 0 ID=cds372;Parent=gene399;Dbxref=Genbank:WP_001311314.1;Name=WP_001311314.1;gbkey=CDS;product=D-allulose-6-phosphate 3-epimerase;protein_id=WP_001311314.1;transl_table=11 NZ_CP010441.1 RefSeq gene 425336 426316 . - . ID=gene400;Name=SH03_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02005;old_locus_tag=SH03_02000 NZ_CP010441.1 Protein Homology CDS 425336 426316 . - 0 ID=cds373;Parent=gene400;Dbxref=Genbank:WP_000507106.1;Name=WP_000507106.1;gbkey=CDS;product=D-allose ABC transporter permease;protein_id=WP_000507106.1;transl_table=11 NZ_CP010441.1 RefSeq gene 426295 427827 . - . ID=gene401;Name=SH03_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02010;old_locus_tag=SH03_02005 NZ_CP010441.1 Protein Homology CDS 426295 427827 . - 0 ID=cds374;Parent=gene401;Dbxref=Genbank:WP_000235257.1;Name=WP_000235257.1;Note=with AlsBC acts to import allose into the cell%3B AlsA contain 2 ATP-binding domains;gbkey=CDS;product=D-allose import ATP-binding protein AlsA;protein_id=WP_000235257.1;transl_table=11 NZ_CP010441.1 RefSeq gene 427954 428889 . - . ID=gene402;Name=SH03_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02015;old_locus_tag=SH03_02010 NZ_CP010441.1 Protein Homology CDS 427954 428889 . - 0 ID=cds375;Parent=gene402;Dbxref=Genbank:WP_001046187.1;Name=WP_001046187.1;gbkey=CDS;product=D-allose-binding periplasmic protein;protein_id=WP_001046187.1;transl_table=11 NZ_CP010441.1 RefSeq gene 428948 429838 . - . ID=gene403;Name=SH03_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02020;old_locus_tag=SH03_02015 NZ_CP010441.1 Protein Homology CDS 428948 429838 . - 0 ID=cds376;Parent=gene403;Dbxref=Genbank:WP_000083216.1;Name=WP_000083216.1;Note=involved in rpiB and als operon repression;gbkey=CDS;product=RpiR family transcriptional regulator;protein_id=WP_000083216.1;transl_table=11 NZ_CP010441.1 RefSeq gene 430197 430646 . + . ID=gene404;Name=SH03_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02025;old_locus_tag=SH03_02020 NZ_CP010441.1 Protein Homology CDS 430197 430646 . + 0 ID=cds377;Parent=gene404;Dbxref=Genbank:WP_000716794.1;Name=WP_000716794.1;gbkey=CDS;product=ribose-5-phosphate isomerase B;protein_id=WP_000716794.1;transl_table=11 NZ_CP010441.1 RefSeq gene 430715 431044 . + . ID=gene405;Name=SH03_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02030;old_locus_tag=SH03_02025 NZ_CP010441.1 Protein Homology CDS 430715 431044 . + 0 ID=cds378;Parent=gene405;Dbxref=Genbank:WP_000819746.1;Name=WP_000819746.1;gbkey=CDS;product=periplasmic protein;protein_id=WP_000819746.1;transl_table=11 NZ_CP010441.1 RefSeq gene 431191 431949 . - . ID=gene406;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=SH03_RS02035;old_locus_tag=SH03_02030 NZ_CP010441.1 Protein Homology CDS 431191 431949 . - 0 ID=cds379;Parent=gene406;Dbxref=Genbank:WP_000059908.1;Name=WP_000059908.1;Note=required for the use of phosphonates and phosphite as phosphorus sources;gbkey=CDS;gene=phnP;product=phosphoribosyl 1%2C2-cyclic phosphodiesterase;protein_id=WP_000059908.1;transl_table=11 NZ_CP010441.1 RefSeq gene 431951 432385 . - . ID=gene407;Name=SH03_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02040;old_locus_tag=SH03_02035 NZ_CP010441.1 Protein Homology CDS 431951 432385 . - 0 ID=cds380;Parent=gene407;Dbxref=Genbank:WP_001110490.1;Name=WP_001110490.1;Note=PhnO in Salmonella enterica catalyzes the acetylation of a range of aminoalkylphosphonic acids%3B part of the biochemical pathway that enables the cell to use phosphonates as a phosphorus source%3B Escherichia coli uses a different mechanism of phosphonate catabolism where PhnO is not essential and seems to play a regulatory role;gbkey=CDS;product=protein PhnO;protein_id=WP_001110490.1;transl_table=11 NZ_CP010441.1 RefSeq gene 432372 432929 . - . ID=gene408;Name=SH03_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02045;old_locus_tag=SH03_02040 NZ_CP010441.1 Protein Homology CDS 432372 432929 . - 0 ID=cds381;Parent=gene408;Dbxref=Genbank:WP_000971886.1;Name=WP_000971886.1;gbkey=CDS;product=ribose 1%2C5-bisphosphate phosphokinase PhnN;protein_id=WP_000971886.1;transl_table=11 NZ_CP010441.1 RefSeq gene 432929 434065 . - . ID=gene409;Name=SH03_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02050;old_locus_tag=SH03_02045 NZ_CP010441.1 Protein Homology CDS 432929 434065 . - 0 ID=cds382;Parent=gene409;Dbxref=Genbank:WP_000586325.1;Name=WP_000586325.1;gbkey=CDS;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase;protein_id=WP_000586325.1;transl_table=11 NZ_CP010441.1 RefSeq gene 434062 434742 . - . ID=gene410;Name=SH03_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02055;old_locus_tag=SH03_02050 NZ_CP010441.1 Protein Homology CDS 434062 434742 . - 0 ID=cds383;Parent=gene410;Dbxref=Genbank:WP_000611405.1;Name=WP_000611405.1;gbkey=CDS;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL;protein_id=WP_000611405.1;transl_table=11 NZ_CP010441.1 RefSeq gene 434853 435611 . - . ID=gene411;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=SH03_RS02060;old_locus_tag=SH03_02055 NZ_CP010441.1 Protein Homology CDS 434853 435611 . - 0 ID=cds384;Parent=gene411;Dbxref=Genbank:WP_001075514.1;Name=WP_001075514.1;gbkey=CDS;gene=phnK;product=phosphonate C-P lyase;protein_id=WP_001075514.1;transl_table=11 NZ_CP010441.1 RefSeq gene 435608 436453 . - . ID=gene412;Name=SH03_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02065;old_locus_tag=SH03_02060 NZ_CP010441.1 Protein Homology CDS 435608 436453 . - 0 ID=cds385;Parent=gene412;Dbxref=Genbank:WP_000002303.1;Name=WP_000002303.1;gbkey=CDS;product=alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase;protein_id=WP_000002303.1;transl_table=11 NZ_CP010441.1 RefSeq gene 436446 437510 . - . ID=gene413;Name=SH03_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02070;old_locus_tag=SH03_02065 NZ_CP010441.1 Protein Homology CDS 436446 437510 . - 0 ID=cds386;Parent=gene413;Dbxref=Genbank:WP_001295388.1;Name=WP_001295388.1;Note=required for the use of phosphonate and phosphite;gbkey=CDS;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI;protein_id=WP_001295388.1;transl_table=11 NZ_CP010441.1 RefSeq gene 437510 438094 . - . ID=gene414;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=SH03_RS02075;old_locus_tag=SH03_02070 NZ_CP010441.1 Protein Homology CDS 437510 438094 . - 0 ID=cds387;Parent=gene414;Dbxref=Genbank:WP_000171628.1;Name=WP_000171628.1;gbkey=CDS;gene=phnH;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH;protein_id=WP_000171628.1;transl_table=11 NZ_CP010441.1 RefSeq gene 438091 438543 . - . ID=gene415;Name=SH03_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02080;old_locus_tag=SH03_02075 NZ_CP010441.1 Protein Homology CDS 438091 438543 . - 0 ID=cds388;Parent=gene415;Dbxref=Genbank:WP_000542790.1;Name=WP_000542790.1;gbkey=CDS;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG;protein_id=WP_000542790.1;transl_table=11 NZ_CP010441.1 RefSeq gene 438544 439269 . - . ID=gene416;Name=SH03_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02085;old_locus_tag=SH03_02080 NZ_CP010441.1 Protein Homology CDS 438544 439269 . - 0 ID=cds389;Parent=gene416;Dbxref=Genbank:WP_001295387.1;Name=WP_001295387.1;Note=may be involved in phosphonate uptake and biodegradation;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001295387.1;transl_table=11 NZ_CP010441.1 RefSeq gene 439290 440077 . - . ID=gene417;Name=SH03_RS02090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS02090;pseudo=true NZ_CP010441.1 Protein Homology CDS 439290 440077 . - 0 ID=cds390;Parent=gene417;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phosphonate ABC transporter permease;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 440183 441199 . - . ID=gene418;Name=SH03_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02095;old_locus_tag=SH03_02090 NZ_CP010441.1 Protein Homology CDS 440183 441199 . - 0 ID=cds391;Parent=gene418;Dbxref=Genbank:WP_000992002.1;Name=WP_000992002.1;Note=with PhnCE is involved in the transport of phosphonates;gbkey=CDS;product=phosphonates-binding periplasmic protein;protein_id=WP_000992002.1;transl_table=11 NZ_CP010441.1 RefSeq gene 441224 442012 . - . ID=gene419;Name=SH03_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02100;old_locus_tag=SH03_02095 NZ_CP010441.1 Protein Homology CDS 441224 442012 . - 0 ID=cds392;Parent=gene419;Dbxref=Genbank:WP_001193409.1;Name=WP_001193409.1;gbkey=CDS;product=phosphonates import ATP-binding protein PhnC;protein_id=WP_001193409.1;transl_table=11 NZ_CP010441.1 RefSeq gene 442145 442588 . - . ID=gene420;Name=SH03_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02105;old_locus_tag=SH03_02100 NZ_CP010441.1 Protein Homology CDS 442145 442588 . - 0 ID=cds393;Parent=gene420;Dbxref=Genbank:WP_001131339.1;Name=WP_001131339.1;gbkey=CDS;product=protein PhnB;protein_id=WP_001131339.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 442652 443210 . + . ID=id39;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 443246 443581 . - . ID=gene421;Name=SH03_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02110;old_locus_tag=SH03_02105 NZ_CP010441.1 Protein Homology CDS 443246 443581 . - 0 ID=cds394;Parent=gene421;Dbxref=Genbank:WP_001300891.1;Name=WP_001300891.1;gbkey=CDS;product=protein PhnA;protein_id=WP_001300891.1;transl_table=11 NZ_CP010441.1 RefSeq gene 443982 446210 . + . ID=gene422;Name=SH03_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02115;old_locus_tag=SH03_02110 NZ_CP010441.1 Protein Homology CDS 443982 446210 . + 0 ID=cds395;Parent=gene422;Dbxref=Genbank:WP_000288603.1;Name=WP_000288603.1;gbkey=CDS;product=clamp-binding protein CrfC;protein_id=WP_000288603.1;transl_table=11 NZ_CP010441.1 RefSeq gene 446207 447085 . + . ID=gene423;Name=SH03_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02120;old_locus_tag=SH03_02115 NZ_CP010441.1 Protein Homology CDS 446207 447085 . + 0 ID=cds396;Parent=gene423;Dbxref=Genbank:WP_000169188.1;Name=WP_000169188.1;gbkey=CDS;product=YjcZ family protein%3B yhjH motility defect suppressor;protein_id=WP_000169188.1;transl_table=11 NZ_CP010441.1 RefSeq gene 447349 448851 . + . ID=gene424;Name=SH03_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02125;old_locus_tag=SH03_02120 NZ_CP010441.1 Protein Homology CDS 447349 448851 . + 0 ID=cds397;Parent=gene424;Dbxref=Genbank:WP_001298520.1;Name=WP_001298520.1;gbkey=CDS;product=proline/betaine transporter;protein_id=WP_001298520.1;transl_table=11 NZ_CP010441.1 RefSeq gene 448963 449052 . + . ID=gene425;Name=SH03_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02130;old_locus_tag=SH03_02125 NZ_CP010441.1 Protein Homology CDS 448963 449052 . + 0 ID=cds398;Parent=gene425;Dbxref=Genbank:WP_000797657.1;Name=WP_000797657.1;gbkey=CDS;product=membrane-bound BasS regulator;protein_id=WP_000797657.1;transl_table=11 NZ_CP010441.1 RefSeq gene 449028 450119 . - . ID=gene426;Name=SH03_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02135;old_locus_tag=SH03_02130 NZ_CP010441.1 Protein Homology CDS 449028 450119 . - 0 ID=cds399;Parent=gene426;Dbxref=Genbank:WP_001300761.1;Name=WP_001300761.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_001300761.1;transl_table=11 NZ_CP010441.1 RefSeq gene 450129 450797 . - . ID=gene427;Name=SH03_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02140;old_locus_tag=SH03_02135 NZ_CP010441.1 Protein Homology CDS 450129 450797 . - 0 ID=cds400;Parent=gene427;Dbxref=Genbank:WP_000697926.1;Name=WP_000697926.1;Note=response regulator in two-component regulatory system with BasS;gbkey=CDS;product=two-component system response regulator;protein_id=WP_000697926.1;transl_table=11 NZ_CP010441.1 RefSeq gene 450794 452437 . - . ID=gene428;Name=SH03_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02145;old_locus_tag=SH03_02140 NZ_CP010441.1 Protein Homology CDS 450794 452437 . - 0 ID=cds401;Parent=gene428;Dbxref=Genbank:WP_000919792.1;Name=WP_000919792.1;gbkey=CDS;product=phosphoethanolamine transferase EptA;protein_id=WP_000919792.1;transl_table=11 NZ_CP010441.1 RefSeq gene 452541 453878 . - . ID=gene429;Name=SH03_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02150;old_locus_tag=SH03_02145 NZ_CP010441.1 Protein Homology CDS 452541 453878 . - 0 ID=cds402;Parent=gene429;Dbxref=Genbank:WP_000093154.1;Name=WP_000093154.1;gbkey=CDS;product=arginine/agmatine antiporter;protein_id=WP_000093154.1;transl_table=11 NZ_CP010441.1 RefSeq gene 454015 454776 . - . ID=gene430;Name=SH03_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02155;old_locus_tag=SH03_02150 NZ_CP010441.1 Protein Homology CDS 454015 454776 . - 0 ID=cds403;Parent=gene430;Dbxref=Genbank:WP_001217060.1;Name=WP_001217060.1;Note=regulates genes involved in arginine decarboxylase;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001217060.1;transl_table=11 NZ_CP010441.1 RefSeq gene 455101 457371 . - . ID=gene431;Name=SH03_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02160;old_locus_tag=SH03_02155 NZ_CP010441.1 Protein Homology CDS 455101 457371 . - 0 ID=cds404;Parent=gene431;Dbxref=Genbank:WP_000978651.1;Name=WP_000978651.1;Note=biodegradative%3B catalyzes the formation of agmatine from arginine;gbkey=CDS;product=arginine decarboxylase;protein_id=WP_000978651.1;transl_table=11 NZ_CP010441.1 RefSeq gene 457567 458475 . - . ID=gene432;Name=SH03_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02165;old_locus_tag=SH03_02160 NZ_CP010441.1 Protein Homology CDS 457567 458475 . - 0 ID=cds405;Parent=gene432;Dbxref=Genbank:WP_001090758.1;Name=WP_001090758.1;gbkey=CDS;product=melibiose operon regulatory protein;protein_id=WP_001090758.1;transl_table=11 NZ_CP010441.1 RefSeq gene 458507 458668 . + . ID=gene433;Name=SH03_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02170;old_locus_tag=SH03_02165 NZ_CP010441.1 Protein Homology CDS 458507 458668 . + 0 ID=cds406;Parent=gene433;Dbxref=Genbank:WP_032083345.1;Name=WP_032083345.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032083345.1;transl_table=11 NZ_CP010441.1 RefSeq gene 458758 460113 . + . ID=gene434;Name=SH03_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02175;old_locus_tag=SH03_02170 NZ_CP010441.1 Protein Homology CDS 458758 460113 . + 0 ID=cds407;Parent=gene434;Dbxref=Genbank:WP_000986601.1;Name=WP_000986601.1;Note=catalyses the hydrolysis of terminal non-reducing alpha-D-galactose residues in alpha-D-galactosides;gbkey=CDS;product=alpha-galactosidase;protein_id=WP_000986601.1;transl_table=11 NZ_CP010441.1 RefSeq gene 460216 461637 . + . ID=gene435;Name=SH03_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02180;old_locus_tag=SH03_02175 NZ_CP010441.1 Protein Homology CDS 460216 461637 . + 0 ID=cds408;Parent=gene435;Dbxref=Genbank:WP_000028111.1;Name=WP_000028111.1;gbkey=CDS;product=melibiose carrier protein;protein_id=WP_000028111.1;transl_table=11 NZ_CP010441.1 RefSeq gene 461776 462405 . - . ID=gene436;Name=SH03_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02185;old_locus_tag=SH03_02180 NZ_CP010441.1 Protein Homology CDS 461776 462405 . - 0 ID=cds409;Parent=gene436;Dbxref=Genbank:WP_000198773.1;Name=WP_000198773.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000198773.1;transl_table=11 NZ_CP010441.1 RefSeq gene 462527 464173 . - . ID=gene437;Name=SH03_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02190;old_locus_tag=SH03_02185 NZ_CP010441.1 Protein Homology CDS 462527 464173 . - 0 ID=cds410;Parent=gene437;Dbxref=Genbank:WP_000066707.1;Name=WP_000066707.1;Note=catalyzes the formation of malate from fumerate;gbkey=CDS;product=fumarate hydratase class I%2C anaerobic;protein_id=WP_000066707.1;transl_table=11 NZ_CP010441.1 RefSeq gene 464251 465591 . - . ID=gene438;Name=SH03_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02195;old_locus_tag=SH03_02190 NZ_CP010441.1 Protein Homology CDS 464251 465591 . - 0 ID=cds411;Parent=gene438;Dbxref=Genbank:WP_000899522.1;Name=WP_000899522.1;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to DcuA%3B DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate%2C malate%2C fumarate and succinate) transporters;gbkey=CDS;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_000899522.1;transl_table=11 NZ_CP010441.1 RefSeq gene 466057 466185 . + . ID=gene439;Name=SH03_RS02200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS02200;partial=true;pseudo=true;start_range=.,466057 NZ_CP010441.1 Protein Homology CDS 466057 466185 . + 0 ID=cds412;Parent=gene439;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=glutamate decarboxylase;pseudo=true;start_range=.,466057;transl_table=11 NZ_CP010441.1 RefSeq gene 466162 466881 . - . ID=gene440;Name=SH03_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02205;old_locus_tag=SH03_02200 NZ_CP010441.1 Protein Homology CDS 466162 466881 . - 0 ID=cds413;Parent=gene440;Dbxref=Genbank:WP_000611288.1;Name=WP_000611288.1;Note=response regulator in two-component regulatory system with DcuS%3B phosphorylated DcuR activates transcription of genes involved in anaerobic fumarate respiration;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000611288.1;transl_table=11 NZ_CP010441.1 RefSeq gene 466878 468509 . - . ID=gene441;Name=SH03_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02210;old_locus_tag=SH03_02205 NZ_CP010441.1 Protein Homology CDS 466878 468509 . - 0 ID=cds414;Parent=gene441;Dbxref=Genbank:WP_001216477.1;Name=WP_001216477.1;Note=C4-dicarboxylate-sensing histidine kinase%3B part of two-component regulatory system with DcuR%3B regulates anaerobic fumarate respiration;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_001216477.1;transl_table=11 NZ_CP010441.1 RefSeq gene 468690 468920 . + . ID=gene442;Name=SH03_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02215;old_locus_tag=SH03_02210 NZ_CP010441.1 Protein Homology CDS 468690 468920 . + 0 ID=cds415;Parent=gene442;Dbxref=Genbank:WP_000371704.1;Name=WP_000371704.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000371704.1;transl_table=11 NZ_CP010441.1 RefSeq gene 468932 469204 . + . ID=gene443;Name=SH03_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02220;old_locus_tag=SH03_02215 NZ_CP010441.1 Protein Homology CDS 468932 469204 . + 0 ID=cds416;Parent=gene443;Dbxref=Genbank:WP_000405651.1;Name=WP_000405651.1;gbkey=CDS;product=GNAT family acetyltransferase;protein_id=WP_000405651.1;transl_table=11 NZ_CP010441.1 RefSeq gene 469291 469506 . + . ID=gene444;Name=SH03_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02225;old_locus_tag=SH03_02220 NZ_CP010441.1 Protein Homology CDS 469291 469506 . + 0 ID=cds417;Parent=gene444;Dbxref=Genbank:WP_000532290.1;Name=WP_000532290.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000532290.1;transl_table=11 NZ_CP010441.1 RefSeq gene 469521 469727 . + . ID=gene445;Name=SH03_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02230;old_locus_tag=SH03_02225 NZ_CP010441.1 Protein Homology CDS 469521 469727 . + 0 ID=cds418;Parent=gene445;Dbxref=Genbank:WP_000272165.1;Name=WP_000272165.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000272165.1;transl_table=11 NZ_CP010441.1 RefSeq gene 469755 469928 . + . ID=gene446;Name=SH03_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02235;old_locus_tag=SH03_02230 NZ_CP010441.1 Protein Homology CDS 469755 469928 . + 0 ID=cds419;Parent=gene446;Dbxref=Genbank:WP_001173343.1;Name=WP_001173343.1;gbkey=CDS;product=toxin of GhoTS toxin-antitoxin pair%3B membrane-lytic protein%3B stimulator of persister cell formation;protein_id=WP_001173343.1;transl_table=11 NZ_CP010441.1 RefSeq gene 470047 471564 . - . ID=gene447;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=SH03_RS02240;old_locus_tag=SH03_02235 NZ_CP010441.1 Protein Homology CDS 470047 471564 . - 0 ID=cds420;Parent=gene447;Dbxref=Genbank:WP_001295074.1;Name=WP_001295074.1;Note=class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1;gbkey=CDS;gene=lysS;product=lysine--tRNA ligase heat inducible;protein_id=WP_001295074.1;transl_table=11 NZ_CP010441.1 RefSeq gene 471801 473258 . - . ID=gene448;Name=SH03_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02245;old_locus_tag=SH03_02240 NZ_CP010441.1 Protein Homology CDS 471801 473258 . - 0 ID=cds421;Parent=gene448;Dbxref=Genbank:WP_000856829.1;Name=WP_000856829.1;gbkey=CDS;product=dipeptide and tripeptide permease C;protein_id=WP_000856829.1;transl_table=11 NZ_CP010441.1 RefSeq gene 473317 475464 . - . ID=gene449;Name=SH03_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02250;old_locus_tag=SH03_02245 NZ_CP010441.1 Protein Homology CDS 473317 475464 . - 0 ID=cds422;Parent=gene449;Dbxref=Genbank:WP_001295383.1;Name=WP_001295383.1;Note=constitutive%3B catalyzes the formation of cadaverine from lysine;gbkey=CDS;product=lysine decarboxylase inducible;protein_id=WP_001295383.1;transl_table=11 NZ_CP010441.1 RefSeq gene 475544 476878 . - . ID=gene450;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=SH03_RS02255;old_locus_tag=SH03_02250 NZ_CP010441.1 Protein Homology CDS 475544 476878 . - 0 ID=cds423;Parent=gene450;Dbxref=Genbank:WP_000092909.1;Name=WP_000092909.1;Note=antiporter protein responsible for lysine import and cadaverine export%3B member of the lysine-dependent acid resistance system 4 (AR4)%3B inner membrane protein;gbkey=CDS;gene=cadB;product=cadaverine/lysine antiporter;protein_id=WP_000092909.1;transl_table=11 NZ_CP010441.1 RefSeq gene 477243 478781 . - . ID=gene451;Name=SH03_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02260;old_locus_tag=SH03_02255 NZ_CP010441.1 Protein Homology CDS 477243 478781 . - 0 ID=cds424;Parent=gene451;Dbxref=Genbank:WP_001187173.1;Name=WP_001187173.1;Note=regulates the cadBA operon;gbkey=CDS;product=transcriptional activator CadC;protein_id=WP_001187173.1;transl_table=11 NZ_CP010441.1 RefSeq gene 479398 479473 . - . ID=gene452;Name=SH03_RS02265;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS02265;old_locus_tag=SH03_02260 NZ_CP010441.1 tRNAscan-SE tRNA 479398 479473 . - . ID=rna27;Parent=gene452;anticodon=(pos:complement(479438..479440));gbkey=tRNA;product=tRNA-Phe NZ_CP010441.1 tRNAscan-SE exon 479398 479473 . - . ID=id40;Parent=rna27;anticodon=(pos:complement(479438..479440));gbkey=tRNA;product=tRNA-Phe NZ_CP010441.1 RefSeq gene 479580 480155 . - . ID=gene453;Name=SH03_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02270;old_locus_tag=SH03_02265 NZ_CP010441.1 Protein Homology CDS 479580 480155 . - 0 ID=cds425;Parent=gene453;Dbxref=Genbank:WP_001188520.1;Name=WP_001188520.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001188520.1;transl_table=11 NZ_CP010441.1 RefSeq gene 480192 481889 . - . ID=gene454;Name=dipZ;gbkey=Gene;gene=dipZ;gene_biotype=protein_coding;locus_tag=SH03_RS02275;old_locus_tag=SH03_02270 NZ_CP010441.1 Protein Homology CDS 480192 481889 . - 0 ID=cds426;Parent=gene454;Dbxref=Genbank:WP_000068922.1;Name=WP_000068922.1;Note=two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm%3B DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm;gbkey=CDS;gene=dipZ;product=thiol:disulfide interchange protein DsbD;protein_id=WP_000068922.1;transl_table=11 NZ_CP010441.1 RefSeq gene 481865 482203 . - . ID=gene455;Name=SH03_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02280;old_locus_tag=SH03_02275 NZ_CP010441.1 Protein Homology CDS 481865 482203 . - 0 ID=cds427;Parent=gene455;Dbxref=Genbank:WP_000883400.1;Name=WP_000883400.1;Note=copper binding protein required for copper tolerance%3B involved in resistance toward heavy metals;gbkey=CDS;product=divalent-cation tolerance protein CutA;protein_id=WP_000883400.1;transl_table=11 NZ_CP010441.1 RefSeq gene 482319 483620 . - . ID=gene456;Name=SH03_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02285;old_locus_tag=SH03_02280 NZ_CP010441.1 Protein Homology CDS 482319 483620 . - 0 ID=cds428;Parent=gene456;Dbxref=Genbank:WP_000961959.1;Name=WP_000961959.1;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to dcuB;gbkey=CDS;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000961959.1;transl_table=11 NZ_CP010441.1 RefSeq gene 483738 485174 . - . ID=gene457;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=SH03_RS02290;old_locus_tag=SH03_02285 NZ_CP010441.1 Protein Homology CDS 483738 485174 . - 0 ID=cds429;Parent=gene457;Dbxref=Genbank:WP_000069437.1;Name=WP_000069437.1;Note=catalyzes the formation of fumarate from aspartate;gbkey=CDS;gene=aspA;product=aspartate ammonia-lyase;protein_id=WP_000069437.1;transl_table=11 NZ_CP010441.1 RefSeq gene 485511 485987 . + . ID=gene458;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=SH03_RS02295;old_locus_tag=SH03_02290 NZ_CP010441.1 Protein Homology CDS 485511 485987 . + 0 ID=cds430;Parent=gene458;Dbxref=Genbank:WP_001267448.1;Name=WP_001267448.1;Note=F exclusion of bacteriophage T7%3B overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7%3B interacts with the F plasmid-encoded PifA protein%3B inner membrane protein;gbkey=CDS;gene=fxsA;product=suppressor of F exclusion of phage T7;protein_id=WP_001267448.1;transl_table=11 NZ_CP010441.1 RefSeq gene 486003 487259 . - . ID=gene459;Name=SH03_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02300;old_locus_tag=SH03_02295 NZ_CP010441.1 Protein Homology CDS 486003 487259 . - 0 ID=cds431;Parent=gene459;Dbxref=Genbank:WP_000015837.1;Name=WP_000015837.1;Note=uncharacterized member of the APC superfamily of amino acid transporters%3B unknown function;gbkey=CDS;product=hypothetical protein;protein_id=WP_000015837.1;transl_table=11 NZ_CP010441.1 RefSeq gene 487535 487828 . + . ID=gene460;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=SH03_RS02305;old_locus_tag=SH03_02300 NZ_CP010441.1 Protein Homology CDS 487535 487828 . + 0 ID=cds432;Parent=gene460;Dbxref=Genbank:WP_001026276.1;Name=WP_001026276.1;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring;gbkey=CDS;gene=groES;product=molecular chaperone GroES;protein_id=WP_001026276.1;transl_table=11 NZ_CP010441.1 RefSeq gene 487872 489518 . + . ID=gene461;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;locus_tag=SH03_RS02310;old_locus_tag=SH03_02305 NZ_CP010441.1 Protein Homology CDS 487872 489518 . + 0 ID=cds433;Parent=gene461;Dbxref=Genbank:WP_000729117.1;Name=WP_000729117.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;gbkey=CDS;gene=groEL;product=chaperonin GroEL;protein_id=WP_000729117.1;transl_table=11 NZ_CP010441.1 RefSeq gene 489656 490009 . + . ID=gene462;Name=SH03_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02315;old_locus_tag=SH03_02310 NZ_CP010441.1 Protein Homology CDS 489656 490009 . + 0 ID=cds434;Parent=gene462;Dbxref=Genbank:WP_000558209.1;Name=WP_000558209.1;gbkey=CDS;product=DUF4156 domain-containing protein;protein_id=WP_000558209.1;transl_table=11 NZ_CP010441.1 RefSeq gene 490212 491081 . - . ID=gene463;Name=SH03_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02320;old_locus_tag=SH03_02315 NZ_CP010441.1 Protein Homology CDS 490212 491081 . - 0 ID=cds435;Parent=gene463;Dbxref=Genbank:WP_001008040.1;Name=WP_001008040.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001008040.1;transl_table=11 NZ_CP010441.1 RefSeq gene 491476 492504 . - . ID=gene464;Name=SH03_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02325;old_locus_tag=SH03_02320 NZ_CP010441.1 Protein Homology CDS 491476 492504 . - 0 ID=cds436;Parent=gene464;Dbxref=Genbank:WP_000940549.1;Name=WP_000940549.1;gbkey=CDS;product=EF-P beta-lysylation protein EpmB;protein_id=WP_000940549.1;transl_table=11 NZ_CP010441.1 RefSeq gene 492546 493112 . + . ID=gene465;Name=SH03_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02330;old_locus_tag=SH03_02325 NZ_CP010441.1 Protein Homology CDS 492546 493112 . + 0 ID=cds437;Parent=gene465;Dbxref=Genbank:WP_000257278.1;Name=WP_000257278.1;gbkey=CDS;product=elongation factor P;protein_id=WP_000257278.1;transl_table=11 NZ_CP010441.1 RefSeq gene 493164 493289 . + . ID=gene466;Name=SH03_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02335;old_locus_tag=SH03_02330 NZ_CP010441.1 Protein Homology CDS 493164 493289 . + 0 ID=cds438;Parent=gene466;Dbxref=Genbank:WP_000977757.1;Name=WP_000977757.1;Note=acts as and antidote to the bacteriolytic entericidin B in the EcnAB toxin-antitoxin complex;gbkey=CDS;product=entericidin A;protein_id=WP_000977757.1;transl_table=11 NZ_CP010441.1 RefSeq gene 493400 493546 . + . ID=gene467;Name=SH03_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02340;old_locus_tag=SH03_02335 NZ_CP010441.1 Protein Homology CDS 493400 493546 . + 0 ID=cds439;Parent=gene467;Dbxref=Genbank:WP_000239596.1;Name=WP_000239596.1;gbkey=CDS;product=entericidin B;protein_id=WP_000239596.1;transl_table=11 NZ_CP010441.1 RefSeq gene 493722 494039 . + . ID=gene468;Name=SH03_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02345;old_locus_tag=SH03_02340 NZ_CP010441.1 Protein Homology CDS 493722 494039 . + 0 ID=cds440;Parent=gene468;Dbxref=Genbank:WP_000118482.1;Name=WP_000118482.1;Note=member of the SMR family of proton-dependent drug efflux transporters%3B quaternary ammonium compound efflux pump%3B confers resistance to cetylpyridinium%2C cetyldimethylethyl ammonium and cetrimide cations;gbkey=CDS;product=quaternary ammonium compound-resistance protein SugE;protein_id=WP_000118482.1;transl_table=11 NZ_CP010441.1 RefSeq gene 494036 494569 . - . ID=gene469;Name=SH03_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02350;old_locus_tag=SH03_02345 NZ_CP010441.1 Protein Homology CDS 494036 494569 . - 0 ID=cds441;Parent=gene469;Dbxref=Genbank:WP_001238378.1;Name=WP_001238378.1;Note=lipocalin%3B globomycin-sensitive outer membrane lipoprotein;gbkey=CDS;product=hypothetical protein;protein_id=WP_001238378.1;transl_table=11 NZ_CP010441.1 RefSeq gene 494658 495791 . - . ID=gene470;Name=SH03_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02355;old_locus_tag=SH03_02350 NZ_CP010441.1 Protein Homology CDS 494658 495791 . - 0 ID=cds442;Parent=gene470;Dbxref=Genbank:WP_001336292.1;Name=WP_001336292.1;gbkey=CDS;product=BlaEC family class C beta-lactamase;protein_id=WP_001336292.1;transl_table=11 NZ_CP010441.1 RefSeq gene 495854 496213 . - . ID=gene471;Name=SH03_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02360;old_locus_tag=SH03_02355 NZ_CP010441.1 Protein Homology CDS 495854 496213 . - 0 ID=cds443;Parent=gene471;Dbxref=Genbank:WP_000609663.1;Name=WP_000609663.1;Note=in conjunction with FrdC acts to anchor the catalytic components of the fumarate reductase to the cytoplasmic membrane;gbkey=CDS;product=fumarate reductase subunit D;protein_id=WP_000609663.1;transl_table=11 NZ_CP010441.1 RefSeq gene 496224 496619 . - . ID=gene472;Name=SH03_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02365;old_locus_tag=SH03_02360 NZ_CP010441.1 Protein Homology CDS 496224 496619 . - 0 ID=cds444;Parent=gene472;Dbxref=Genbank:WP_000208757.1;Name=WP_000208757.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase subunit C;protein_id=WP_000208757.1;transl_table=11 NZ_CP010441.1 RefSeq gene 496630 497364 . - . ID=gene473;Name=SH03_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02370;old_locus_tag=SH03_02365 NZ_CP010441.1 Protein Homology CDS 496630 497364 . - 0 ID=cds445;Parent=gene473;Dbxref=Genbank:WP_000829498.1;Name=WP_000829498.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase iron-sulfur subunit;protein_id=WP_000829498.1;transl_table=11 NZ_CP010441.1 RefSeq gene 497357 499165 . - . ID=gene474;Name=SH03_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02375;old_locus_tag=SH03_02370 NZ_CP010441.1 Protein Homology CDS 497357 499165 . - 0 ID=cds446;Parent=gene474;Dbxref=Genbank:WP_001192973.1;Name=WP_001192973.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase flavoprotein subunit;protein_id=WP_001192973.1;transl_table=11 NZ_CP010441.1 RefSeq gene 499490 500467 . + . ID=gene475;Name=SH03_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02380;old_locus_tag=SH03_02375 NZ_CP010441.1 Protein Homology CDS 499490 500467 . + 0 ID=cds447;Parent=gene475;Dbxref=Genbank:WP_000004771.1;Name=WP_000004771.1;Note=poxA%3B regulates pyruvate oxidase poxB;gbkey=CDS;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_000004771.1;transl_table=11 NZ_CP010441.1 RefSeq gene 500686 502188 . + . ID=gene476;Name=SH03_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02385;old_locus_tag=SH03_02380 NZ_CP010441.1 Protein Homology CDS 500686 502188 . + 0 ID=cds448;Parent=gene476;Dbxref=Genbank:WP_001336293.1;Name=WP_001336293.1;gbkey=CDS;product=inner membrane transporter YjeM;protein_id=WP_001336293.1;transl_table=11 NZ_CP010441.1 RefSeq gene 502240 502554 . + . ID=gene477;Name=SH03_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02390;old_locus_tag=SH03_02385 NZ_CP010441.1 Protein Homology CDS 502240 502554 . + 0 ID=cds449;Parent=gene477;Dbxref=Genbank:WP_000342867.1;Name=WP_000342867.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000342867.1;transl_table=11 NZ_CP010441.1 RefSeq gene 502551 502865 . + . ID=gene478;Name=SH03_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02395;old_locus_tag=SH03_02390 NZ_CP010441.1 Protein Homology CDS 502551 502865 . + 0 ID=cds450;Parent=gene478;Dbxref=Genbank:WP_001276180.1;Name=WP_001276180.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001276180.1;transl_table=11 NZ_CP010441.1 RefSeq gene 502894 506217 . - . ID=gene479;Name=SH03_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02400;old_locus_tag=SH03_02395 NZ_CP010441.1 Protein Homology CDS 502894 506217 . - 0 ID=cds451;Parent=gene479;Dbxref=Genbank:WP_001236847.1;Name=WP_001236847.1;gbkey=CDS;product=miniconductance mechanosensitive channel MscM;protein_id=WP_001236847.1;transl_table=11 NZ_CP010441.1 RefSeq gene 506239 507207 . - . ID=gene480;Name=psd;gbkey=Gene;gene=psd;gene_biotype=protein_coding;locus_tag=SH03_RS02405;old_locus_tag=SH03_02400 NZ_CP010441.1 Protein Homology CDS 506239 507207 . - 0 ID=cds452;Parent=gene480;Dbxref=Genbank:WP_000934920.1;Name=WP_000934920.1;Note=catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine;gbkey=CDS;gene=psd;product=phosphatidylserine decarboxylase proenzyme;protein_id=WP_000934920.1;transl_table=11 NZ_CP010441.1 RefSeq gene 507304 508356 . - . ID=gene481;Name=SH03_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02410;old_locus_tag=SH03_02405 NZ_CP010441.1 Protein Homology CDS 507304 508356 . - 0 ID=cds453;Parent=gene481;Dbxref=Genbank:WP_000041964.1;Name=WP_000041964.1;Note=EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity;gbkey=CDS;product=ribosome small subunit-dependent GTPase A;protein_id=WP_000041964.1;transl_table=11 NZ_CP010441.1 RefSeq gene 508451 508996 . + . ID=gene482;Name=SH03_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02415;old_locus_tag=SH03_02410 NZ_CP010441.1 Protein Homology CDS 508451 508996 . + 0 ID=cds454;Parent=gene482;Dbxref=Genbank:WP_001295188.1;Name=WP_001295188.1;Note=3'-5' exoribonuclease specific for small oligoribonuclotides;gbkey=CDS;product=oligoribonuclease;protein_id=WP_001295188.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 509207 509507 . + . ID=id41;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 509207 509282 . + . ID=gene483;Name=SH03_RS02420;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS02420;old_locus_tag=SH03_02415 NZ_CP010441.1 tRNAscan-SE tRNA 509207 509282 . + . ID=rna28;Parent=gene483;anticodon=(pos:509240..509242);gbkey=tRNA;product=tRNA-Gly NZ_CP010441.1 tRNAscan-SE exon 509207 509282 . + . ID=id42;Parent=rna28;anticodon=(pos:509240..509242);gbkey=tRNA;product=tRNA-Gly NZ_CP010441.1 RefSeq gene 509319 509394 . + . ID=gene484;Name=SH03_RS02425;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS02425;old_locus_tag=SH03_02420 NZ_CP010441.1 tRNAscan-SE tRNA 509319 509394 . + . ID=rna29;Parent=gene484;anticodon=(pos:509352..509354);gbkey=tRNA;product=tRNA-Gly NZ_CP010441.1 tRNAscan-SE exon 509319 509394 . + . ID=id43;Parent=rna29;anticodon=(pos:509352..509354);gbkey=tRNA;product=tRNA-Gly NZ_CP010441.1 RefSeq gene 509430 509505 . + . ID=gene485;Name=SH03_RS02430;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS02430;old_locus_tag=SH03_02425 NZ_CP010441.1 tRNAscan-SE tRNA 509430 509505 . + . ID=rna30;Parent=gene485;anticodon=(pos:509463..509465);gbkey=tRNA;product=tRNA-Gly NZ_CP010441.1 tRNAscan-SE exon 509430 509505 . + . ID=id44;Parent=rna30;anticodon=(pos:509463..509465);gbkey=tRNA;product=tRNA-Gly NZ_CP010441.1 RefSeq gene 509775 510914 . - . ID=gene486;Name=SH03_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02435;old_locus_tag=SH03_02430 NZ_CP010441.1 Protein Homology CDS 509775 510914 . - 0 ID=cds455;Parent=gene486;Dbxref=Genbank:WP_001294219.1;Name=WP_001294219.1;gbkey=CDS;product=epoxyqueuosine reductase;protein_id=WP_001294219.1;transl_table=11 NZ_CP010441.1 RefSeq gene 510928 512460 . + . ID=gene487;Name=SH03_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02440;old_locus_tag=SH03_02435 NZ_CP010441.1 Protein Homology CDS 510928 512460 . + 0 ID=cds456;Parent=gene487;Dbxref=Genbank:WP_001339108.1;Name=WP_001339108.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_001339108.1;transl_table=11 NZ_CP010441.1 RefSeq gene 512432 512893 . + . ID=gene488;Name=SH03_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02445;old_locus_tag=SH03_02440 NZ_CP010441.1 Protein Homology CDS 512432 512893 . + 0 ID=cds457;Parent=gene488;Dbxref=Genbank:WP_000981977.1;Name=WP_000981977.1;Note=needed for nucleoid integrity%3B possibly involved in cell wall synthesis;gbkey=CDS;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaE;protein_id=WP_000981977.1;transl_table=11 NZ_CP010441.1 RefSeq gene 512912 514249 . + . ID=gene489;Name=SH03_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02450;old_locus_tag=SH03_02445 NZ_CP010441.1 Protein Homology CDS 512912 514249 . + 0 ID=cds458;Parent=gene489;Dbxref=Genbank:WP_000990333.1;Name=WP_000990333.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_000990333.1;transl_table=11 NZ_CP010441.1 RefSeq gene 514259 516106 . + . ID=gene490;Name=SH03_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02455;old_locus_tag=SH03_02450 NZ_CP010441.1 Protein Homology CDS 514259 516106 . + 0 ID=cds459;Parent=gene490;Dbxref=Genbank:WP_001122505.1;Name=WP_001122505.1;gbkey=CDS;product=DNA mismatch repair protein MutL;protein_id=WP_001122505.1;transl_table=11 NZ_CP010441.1 RefSeq gene 516099 517049 . + . ID=gene491;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=SH03_RS02460;old_locus_tag=SH03_02455 NZ_CP010441.1 Protein Homology CDS 516099 517049 . + 0 ID=cds460;Parent=gene491;Dbxref=Genbank:WP_001280345.1;Name=WP_001280345.1;Note=IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity;gbkey=CDS;gene=miaA;product=tRNA dimethylallyltransferase;protein_id=WP_001280345.1;transl_table=11 NZ_CP010441.1 RefSeq gene 517135 517443 . + . ID=gene492;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=SH03_RS02465;old_locus_tag=SH03_02460 NZ_CP010441.1 Protein Homology CDS 517135 517443 . + 0 ID=cds461;Parent=gene492;Dbxref=Genbank:WP_001051883.1;Name=WP_001051883.1;Note=HF-I%2C host factor for RNA phage Q beta replication;gbkey=CDS;gene=hfq;product=RNA chaperone Hfq;protein_id=WP_001051883.1;transl_table=11 NZ_CP010441.1 RefSeq gene 517519 518799 . + . ID=gene493;Name=SH03_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02470;old_locus_tag=SH03_02465 NZ_CP010441.1 Protein Homology CDS 517519 518799 . + 0 ID=cds462;Parent=gene493;Dbxref=Genbank:WP_000460362.1;Name=WP_000460362.1;Note=involved in modulation of proteins HflK and HflC%3B part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein;gbkey=CDS;product=GTPase HflX;protein_id=WP_000460362.1;transl_table=11 NZ_CP010441.1 RefSeq gene 518885 520144 . + . ID=gene494;Name=SH03_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02475;old_locus_tag=SH03_02470 NZ_CP010441.1 Protein Homology CDS 518885 520144 . + 0 ID=cds463;Parent=gene494;Dbxref=Genbank:WP_000312488.1;Name=WP_000312488.1;Note=with HflC inhibits proteolysis of lambda cII protein by FtsH;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_000312488.1;transl_table=11 NZ_CP010441.1 RefSeq gene 520147 521151 . + . ID=gene495;Name=SH03_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02480;old_locus_tag=SH03_02475 NZ_CP010441.1 Protein Homology CDS 520147 521151 . + 0 ID=cds464;Parent=gene495;Dbxref=Genbank:WP_001232412.1;Name=WP_001232412.1;Note=with HflK inhibits proteolysis of lambda cII protein by FtsH;gbkey=CDS;product=modulator of FtsH protease HflC;protein_id=WP_001232412.1;transl_table=11 NZ_CP010441.1 RefSeq gene 521233 521430 . + . ID=gene496;Name=SH03_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02485;old_locus_tag=SH03_02480 NZ_CP010441.1 Protein Homology CDS 521233 521430 . + 0 ID=cds465;Parent=gene496;Dbxref=Genbank:WP_001089295.1;Name=WP_001089295.1;gbkey=CDS;product=membrane protein;protein_id=WP_001089295.1;transl_table=11 NZ_CP010441.1 RefSeq gene 521534 522832 . + . ID=gene497;Name=SH03_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02490;old_locus_tag=SH03_02485 NZ_CP010441.1 Protein Homology CDS 521534 522832 . + 0 ID=cds466;Parent=gene497;Dbxref=Genbank:WP_000527955.1;Name=WP_000527955.1;Note=catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis;gbkey=CDS;product=adenylosuccinate synthetase;protein_id=WP_000527955.1;transl_table=11 NZ_CP010441.1 RefSeq gene 523037 523462 . + . ID=gene498;Name=SH03_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02495;old_locus_tag=SH03_02490 NZ_CP010441.1 Protein Homology CDS 523037 523462 . + 0 ID=cds467;Parent=gene498;Dbxref=Genbank:WP_001177639.1;Name=WP_001177639.1;Note=negatively regulates the transcription of genes upregulated by nitrosative stress;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001177639.1;transl_table=11 NZ_CP010441.1 RefSeq gene 523501 525942 . + . ID=gene499;Name=SH03_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02500;old_locus_tag=SH03_02495 NZ_CP010441.1 Protein Homology CDS 523501 525942 . + 0 ID=cds468;Parent=gene499;Dbxref=Genbank:WP_046377545.1;Name=WP_046377545.1;Note=3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs;gbkey=CDS;product=exoribonuclease R;protein_id=WP_046377545.1;transl_table=11 NZ_CP010441.1 RefSeq gene 526122 526853 . + . ID=gene500;Name=SH03_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02505;old_locus_tag=SH03_02500 NZ_CP010441.1 Protein Homology CDS 526122 526853 . + 0 ID=cds469;Parent=gene500;Dbxref=Genbank:WP_001293282.1;Name=WP_001293282.1;Note=Specifically methylates the ribose of guanosine 2251 in 23S rRNA;gbkey=CDS;product=23S rRNA (guanosine-2'-O-)-methyltransferase RlmB;protein_id=WP_001293282.1;transl_table=11 NZ_CP010441.1 RefSeq gene 526980 527381 . + . ID=gene501;Name=SH03_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02510;old_locus_tag=SH03_02505 NZ_CP010441.1 Protein Homology CDS 526980 527381 . + 0 ID=cds470;Parent=gene501;Dbxref=Genbank:WP_000220128.1;Name=WP_000220128.1;gbkey=CDS;product=DUF2170 domain-containing protein;protein_id=WP_000220128.1;transl_table=11 NZ_CP010441.1 RefSeq gene 527400 528098 . + . ID=gene502;Name=SH03_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02515;old_locus_tag=SH03_02510 NZ_CP010441.1 Protein Homology CDS 527400 528098 . + 0 ID=cds471;Parent=gene502;Dbxref=Genbank:WP_000511955.1;Name=WP_000511955.1;gbkey=CDS;product=PspA/IM30 family protein;protein_id=WP_000511955.1;transl_table=11 NZ_CP010441.1 RefSeq gene 528149 528808 . + . ID=gene503;Name=SH03_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02520;old_locus_tag=SH03_02515 NZ_CP010441.1 Protein Homology CDS 528149 528808 . + 0 ID=cds472;Parent=gene503;Dbxref=Genbank:WP_000012550.1;Name=WP_000012550.1;gbkey=CDS;product=DUF2491 domain-containing protein;protein_id=WP_000012550.1;transl_table=11 NZ_CP010441.1 RefSeq gene 528826 529224 . + . ID=gene504;Name=SH03_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02525;old_locus_tag=SH03_02520 NZ_CP010441.1 Protein Homology CDS 528826 529224 . + 0 ID=cds473;Parent=gene504;Dbxref=Genbank:WP_000547760.1;Name=WP_000547760.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000547760.1;transl_table=11 NZ_CP010441.1 RefSeq gene 529234 529872 . + . ID=gene505;Name=SH03_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02530;old_locus_tag=SH03_02525 NZ_CP010441.1 Protein Homology CDS 529234 529872 . + 0 ID=cds474;Parent=gene505;Dbxref=Genbank:WP_000101658.1;Name=WP_000101658.1;gbkey=CDS;product=DUF1190 domain-containing protein;protein_id=WP_000101658.1;transl_table=11 NZ_CP010441.1 RefSeq gene 529875 531038 . + . ID=gene506;Name=SH03_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02535;old_locus_tag=SH03_02530 NZ_CP010441.1 Protein Homology CDS 529875 531038 . + 0 ID=cds475;Parent=gene506;Dbxref=Genbank:WP_000943959.1;Name=WP_000943959.1;gbkey=CDS;product=ATP-Grasp family ATPase;protein_id=WP_000943959.1;transl_table=11 NZ_CP010441.1 RefSeq gene 531122 532747 . + . ID=gene507;Name=SH03_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02540;old_locus_tag=SH03_02535 NZ_CP010441.1 Protein Homology CDS 531122 532747 . + 0 ID=cds476;Parent=gene507;Dbxref=Genbank:WP_001350567.1;Name=WP_001350567.1;Note=catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA;gbkey=CDS;product=DNA alkylation damage repair protein;protein_id=WP_001350567.1;transl_table=11 NZ_CP010441.1 RefSeq gene 532864 533139 . - . ID=gene508;Name=SH03_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02545;old_locus_tag=SH03_02540 NZ_CP010441.1 Protein Homology CDS 532864 533139 . - 0 ID=cds477;Parent=gene508;Dbxref=Genbank:WP_000811566.1;Name=WP_000811566.1;gbkey=CDS;product=DUF1471 domain-containing protein;protein_id=WP_000811566.1;transl_table=11 NZ_CP010441.1 RefSeq gene 533288 533617 . - . ID=gene509;Name=SH03_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02550;old_locus_tag=SH03_02545 NZ_CP010441.1 Protein Homology CDS 533288 533617 . - 0 ID=cds478;Parent=gene509;Dbxref=Genbank:WP_000254633.1;Name=WP_000254633.1;Note=in Escherichia coli%2C mutation of this gene affects biofilm maturation%2C stress response%2C and motility;gbkey=CDS;product=lipoprotein BsmA;protein_id=WP_000254633.1;transl_table=11 NZ_CP010441.1 RefSeq gene 533799 534548 . + . ID=gene510;Name=SH03_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02555;old_locus_tag=SH03_02550 NZ_CP010441.1 Protein Homology CDS 533799 534548 . + 0 ID=cds479;Parent=gene510;Dbxref=Genbank:WP_000569707.1;Name=WP_000569707.1;Note=YjfP%3B esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro%3B unknown function and substrate in vivo;gbkey=CDS;product=esterase;protein_id=WP_000569707.1;transl_table=11 NZ_CP010441.1 RefSeq gene 534545 535300 . - . ID=gene511;Name=SH03_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02560;old_locus_tag=SH03_02555 NZ_CP010441.1 Protein Homology CDS 534545 535300 . - 0 ID=cds480;Parent=gene511;Dbxref=Genbank:WP_000133631.1;Name=WP_000133631.1;Note=negative regulator of ulaG and ulaABCDEF;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000133631.1;transl_table=11 NZ_CP010441.1 RefSeq gene 535408 536472 . - . ID=gene512;Name=SH03_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02565;old_locus_tag=SH03_02560 NZ_CP010441.1 Protein Homology CDS 535408 536472 . - 0 ID=cds481;Parent=gene512;Dbxref=Genbank:WP_001295191.1;Name=WP_001295191.1;gbkey=CDS;product=L-ascorbate-6-phosphate lactonase UlaG;protein_id=WP_001295191.1;transl_table=11 NZ_CP010441.1 RefSeq gene 536827 538224 . + . ID=gene513;Name=SH03_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02570;old_locus_tag=SH03_02565 NZ_CP010441.1 Protein Homology CDS 536827 538224 . + 0 ID=cds482;Parent=gene513;Dbxref=Genbank:WP_001350568.1;Name=WP_001350568.1;gbkey=CDS;product=ascorbate-specific permease IIC component UlaA;protein_id=WP_001350568.1;transl_table=11 NZ_CP010441.1 RefSeq gene 538240 538545 . + . ID=gene514;Name=SH03_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02575;old_locus_tag=SH03_02570 NZ_CP010441.1 Protein Homology CDS 538240 538545 . + 0 ID=cds483;Parent=gene514;Dbxref=Genbank:WP_000218362.1;Name=WP_000218362.1;Note=involved in the phosphorylation and transport of sugars across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=ascorbate-specific phosphotransferase enzyme IIB component;protein_id=WP_000218362.1;transl_table=11 NZ_CP010441.1 RefSeq gene 538555 539019 . + . ID=gene515;Name=SH03_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02580;old_locus_tag=SH03_02575 NZ_CP010441.1 Protein Homology CDS 538555 539019 . + 0 ID=cds484;Parent=gene515;Dbxref=Genbank:WP_000776517.1;Name=WP_000776517.1;Note=involved in the phosphorylation and transport of sugars across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=ascorbate-specific phosphotransferase enzyme IIA component;protein_id=WP_000776517.1;transl_table=11 NZ_CP010441.1 RefSeq gene 539033 539683 . + . ID=gene516;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=SH03_RS02585;old_locus_tag=SH03_02580 NZ_CP010441.1 Protein Homology CDS 539033 539683 . + 0 ID=cds485;Parent=gene516;Dbxref=Genbank:WP_000056749.1;Name=WP_000056749.1;Note=catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization;gbkey=CDS;gene=ulaD;product=3-keto-L-gulonate-6-phosphate decarboxylase ulaD;protein_id=WP_000056749.1;transl_table=11 NZ_CP010441.1 RefSeq gene 539693 540547 . + . ID=gene517;Name=SH03_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02590;old_locus_tag=SH03_02585 NZ_CP010441.1 Protein Homology CDS 539693 540547 . + 0 ID=cds486;Parent=gene517;Dbxref=Genbank:WP_000949502.1;Name=WP_000949502.1;gbkey=CDS;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_000949502.1;transl_table=11 NZ_CP010441.1 RefSeq gene 540547 541233 . + . ID=gene518;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=SH03_RS02595;old_locus_tag=SH03_02590 NZ_CP010441.1 Protein Homology CDS 540547 541233 . + 0 ID=cds487;Parent=gene518;Dbxref=Genbank:WP_001170847.1;Name=WP_001170847.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase UlaF;protein_id=WP_001170847.1;transl_table=11 NZ_CP010441.1 RefSeq gene 541363 541638 . - . ID=gene519;Name=SH03_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02600;old_locus_tag=SH03_02595 NZ_CP010441.1 Protein Homology CDS 541363 541638 . - 0 ID=cds488;Parent=gene519;Dbxref=Genbank:WP_000492914.1;Name=WP_000492914.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000492914.1;transl_table=11 NZ_CP010441.1 RefSeq gene 541722 541841 . + . ID=gene520;Name=SH03_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02605;old_locus_tag=SH03_02600 NZ_CP010441.1 Protein Homology CDS 541722 541841 . + 0 ID=cds489;Parent=gene520;Dbxref=Genbank:WP_032230940.1;Name=WP_032230940.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032230940.1;transl_table=11 NZ_CP010441.1 RefSeq gene 541965 542360 . + . ID=gene521;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=SH03_RS02610;old_locus_tag=SH03_02605 NZ_CP010441.1 Protein Homology CDS 541965 542360 . + 0 ID=cds490;Parent=gene521;Dbxref=Genbank:WP_001216676.1;Name=WP_001216676.1;Note=binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21;gbkey=CDS;gene=rpsF;product=30S ribosomal protein S6;protein_id=WP_001216676.1;transl_table=11 NZ_CP010441.1 RefSeq gene 542367 542681 . + . ID=gene522;Name=SH03_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02615;old_locus_tag=SH03_02610 NZ_CP010441.1 Protein Homology CDS 542367 542681 . + 0 ID=cds491;Parent=gene522;Dbxref=Genbank:WP_001315977.1;Name=WP_001315977.1;Note=binds single-stranded DNA at the primosome assembly site;gbkey=CDS;product=primosomal replication protein n;protein_id=WP_001315977.1;transl_table=11 NZ_CP010441.1 RefSeq gene 542686 542913 . + . ID=gene523;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=SH03_RS02620;old_locus_tag=SH03_02615 NZ_CP010441.1 Protein Homology CDS 542686 542913 . + 0 ID=cds492;Parent=gene523;Dbxref=Genbank:WP_000135199.1;Name=WP_000135199.1;Note=binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit;gbkey=CDS;gene=rpsR;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_CP010441.1 RefSeq gene 542955 543404 . + . ID=gene524;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=SH03_RS02625;old_locus_tag=SH03_02620 NZ_CP010441.1 Protein Homology CDS 542955 543404 . + 0 ID=cds493;Parent=gene524;Dbxref=Genbank:WP_001196062.1;Name=WP_001196062.1;Note=in Escherichia coli this protein is wrapped around the base of the L1 stalk;gbkey=CDS;gene=rplI;product=50S ribosomal protein L9;protein_id=WP_001196062.1;transl_table=11 NZ_CP010441.1 RefSeq gene 543475 544269 . - . ID=gene525;Name=SH03_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02630;old_locus_tag=SH03_02625 NZ_CP010441.1 Protein Homology CDS 543475 544269 . - 0 ID=cds494;Parent=gene525;Dbxref=Genbank:WP_000174714.1;Name=WP_000174714.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000174714.1;transl_table=11 NZ_CP010441.1 RefSeq gene 544616 544942 . + . ID=gene526;Name=SH03_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02635;old_locus_tag=SH03_02630 NZ_CP010441.1 Protein Homology CDS 544616 544942 . + 0 ID=cds495;Parent=gene526;Dbxref=Genbank:WP_000555422.1;Name=WP_000555422.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000555422.1;transl_table=11 NZ_CP010441.1 RefSeq gene 544926 545564 . - . ID=gene527;Name=SH03_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02640;old_locus_tag=SH03_02635 NZ_CP010441.1 Protein Homology CDS 544926 545564 . - 0 ID=cds496;Parent=gene527;Dbxref=Genbank:WP_001119478.1;Name=WP_001119478.1;gbkey=CDS;product=OapA family protein;protein_id=WP_001119478.1;transl_table=11 NZ_CP010441.1 RefSeq gene 545782 546402 . + . ID=gene528;Name=SH03_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02645;old_locus_tag=SH03_02640 NZ_CP010441.1 Protein Homology CDS 545782 546402 . + 0 ID=cds497;Parent=gene528;Dbxref=Genbank:WP_000211225.1;Name=WP_000211225.1;Note=FKBP-type%3B rotamase%3B catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides;gbkey=CDS;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000211225.1;transl_table=11 NZ_CP010441.1 RefSeq gene 546711 548123 . + . ID=gene529;Name=SH03_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02650;old_locus_tag=SH03_02645 NZ_CP010441.1 Protein Homology CDS 546711 548123 . + 0 ID=cds498;Parent=gene529;Dbxref=Genbank:WP_000228346.1;Name=WP_000228346.1;gbkey=CDS;product=D-serine/D-alanine/glycine transporter;protein_id=WP_000228346.1;transl_table=11 NZ_CP010441.1 RefSeq gene 548168 548830 . - . ID=gene530;Name=SH03_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02655;old_locus_tag=SH03_02650 NZ_CP010441.1 Protein Homology CDS 548168 548830 . - 0 ID=cds499;Parent=gene530;Dbxref=Genbank:WP_000331456.1;Name=WP_000331456.1;Note=Involved in anaerobic NO protection and iron metabolism;gbkey=CDS;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_000331456.1;transl_table=11 NZ_CP010441.1 RefSeq gene 548938 549903 . - . ID=gene531;Name=SH03_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02660;old_locus_tag=SH03_02655 NZ_CP010441.1 Protein Homology CDS 548938 549903 . - 0 ID=cds500;Parent=gene531;Dbxref=Genbank:WP_001350569.1;Name=WP_001350569.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001350569.1;transl_table=11 NZ_CP010441.1 RefSeq gene 550011 550871 . - . ID=gene532;Name=SH03_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02665;old_locus_tag=SH03_02660 NZ_CP010441.1 Protein Homology CDS 550011 550871 . - 0 ID=cds501;Parent=gene532;Dbxref=Genbank:WP_000560561.1;Name=WP_000560561.1;gbkey=CDS;product=quinone oxidoreductase 2;protein_id=WP_000560561.1;transl_table=11 NZ_CP010441.1 RefSeq gene 550870 551340 . + . ID=gene533;Name=SH03_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02670;old_locus_tag=SH03_02665 NZ_CP010441.1 Protein Homology CDS 550870 551340 . + 0 ID=cds502;Parent=gene533;Dbxref=Genbank:WP_001307543.1;Name=WP_001307543.1;gbkey=CDS;product=HxlR family transcriptional regulator;protein_id=WP_001307543.1;transl_table=11 NZ_CP010441.1 RefSeq gene 551469 553412 . - . ID=gene534;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=SH03_RS02675;old_locus_tag=SH03_02670 NZ_CP010441.1 Protein Homology CDS 551469 553412 . - 0 ID=cds503;Parent=gene534;Dbxref=Genbank:WP_000589431.1;Name=WP_000589431.1;Note=periplasmic enzyme%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate;gbkey=CDS;gene=cpdB;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_000589431.1;transl_table=11 NZ_CP010441.1 RefSeq gene 553602 554342 . + . ID=gene535;Name=SH03_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02680;old_locus_tag=SH03_02675 NZ_CP010441.1 Protein Homology CDS 553602 554342 . + 0 ID=cds504;Parent=gene535;Dbxref=Genbank:WP_000886919.1;Name=WP_000886919.1;Note=catalyzes the formation of AMP from adenosine-3'%2C5'-bisphosphate;gbkey=CDS;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000886919.1;transl_table=11 NZ_CP010441.1 RefSeq gene 554554 555492 . + . ID=gene536;Name=SH03_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02685;old_locus_tag=SH03_02680 NZ_CP010441.1 Protein Homology CDS 554554 555492 . + 0 ID=cds505;Parent=gene536;Dbxref=Genbank:WP_000937655.1;Name=WP_000937655.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000937655.1;transl_table=11 NZ_CP010441.1 RefSeq gene 555555 556109 . - . ID=gene537;Name=SH03_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02690;old_locus_tag=SH03_02685 NZ_CP010441.1 Protein Homology CDS 555555 556109 . - 0 ID=cds506;Parent=gene537;Dbxref=Genbank:WP_000175279.1;Name=WP_000175279.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000175279.1;transl_table=11 NZ_CP010441.1 RefSeq gene 556434 556640 . + . ID=gene538;Name=SH03_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02695;old_locus_tag=SH03_02690 NZ_CP010441.1 Protein Homology CDS 556434 556640 . + 0 ID=cds507;Parent=gene538;Dbxref=Genbank:WP_000689228.1;Name=WP_000689228.1;gbkey=CDS;product=DUF1107 domain-containing protein;protein_id=WP_000689228.1;transl_table=11 NZ_CP010441.1 RefSeq gene 556719 558062 . - . ID=gene539;Name=SH03_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02700;old_locus_tag=SH03_02695 NZ_CP010441.1 Protein Homology CDS 556719 558062 . - 0 ID=cds508;Parent=gene539;Dbxref=Genbank:WP_000935036.1;Name=WP_000935036.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000935036.1;transl_table=11 NZ_CP010441.1 RefSeq gene 558385 559023 . - . ID=gene540;Name=SH03_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02705;old_locus_tag=SH03_02700 NZ_CP010441.1 Protein Homology CDS 558385 559023 . - 0 ID=cds509;Parent=gene540;Dbxref=Genbank:WP_001295196.1;Name=WP_001295196.1;Note=this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form%3B provides protection against oxidative stress;gbkey=CDS;product=peptide methionine sulfoxide reductase MsrA;protein_id=WP_001295196.1;transl_table=11 NZ_CP010441.1 RefSeq gene 559131 559259 . + . ID=gene541;Name=SH03_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02710;old_locus_tag=SH03_02705 NZ_CP010441.1 Protein Homology CDS 559131 559259 . + 0 ID=cds510;Parent=gene541;Dbxref=Genbank:WP_001296688.1;Name=WP_001296688.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001296688.1;transl_table=11 NZ_CP010441.1 RefSeq gene 559229 560962 . + . ID=gene542;Name=SH03_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02715;old_locus_tag=SH03_02710 NZ_CP010441.1 Protein Homology CDS 559229 560962 . + 0 ID=cds511;Parent=gene542;Dbxref=Genbank:WP_001269327.1;Name=WP_001269327.1;gbkey=CDS;product=translocation and assembly module TamA;protein_id=WP_001269327.1;transl_table=11 NZ_CP010441.1 RefSeq gene 560959 564738 . + . ID=gene543;Name=SH03_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02720;old_locus_tag=SH03_02715 NZ_CP010441.1 Protein Homology CDS 560959 564738 . + 0 ID=cds512;Parent=gene543;Dbxref=Genbank:WP_000060911.1;Name=WP_000060911.1;gbkey=CDS;product=translocation and assembly module TamB;protein_id=WP_000060911.1;transl_table=11 NZ_CP010441.1 RefSeq gene 564741 565082 . + . ID=gene544;Name=SH03_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02725;old_locus_tag=SH03_02720 NZ_CP010441.1 Protein Homology CDS 564741 565082 . + 0 ID=cds513;Parent=gene544;Dbxref=Genbank:WP_001219160.1;Name=WP_001219160.1;gbkey=CDS;product=gamma-glutamylcyclotransferase YtfP;protein_id=WP_001219160.1;transl_table=11 NZ_CP010441.1 RefSeq gene 565294 565545 . + . ID=gene545;Name=SH03_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02730;old_locus_tag=SH03_02725 NZ_CP010441.1 Protein Homology CDS 565294 565545 . + 0 ID=cds514;Parent=gene545;Dbxref=Genbank:WP_001223208.1;Name=WP_001223208.1;Note=part of the toxin-antitoxin ChpB-ChpS system;gbkey=CDS;product=antitoxin ChpS;protein_id=WP_001223208.1;transl_table=11 NZ_CP010441.1 RefSeq gene 565539 565889 . + . ID=gene546;Name=SH03_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02735;old_locus_tag=SH03_02730 NZ_CP010441.1 Protein Homology CDS 565539 565889 . + 0 ID=cds515;Parent=gene546;Dbxref=Genbank:WP_000239577.1;Name=WP_000239577.1;Note=toxin of the ChpB-ChpS toxin-antitoxin system;gbkey=CDS;product=mRNA interferase ChpB;protein_id=WP_000239577.1;transl_table=11 NZ_CP010441.1 RefSeq gene 565969 566499 . - . ID=gene547;Name=SH03_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02740;old_locus_tag=SH03_02735 NZ_CP010441.1 Protein Homology CDS 565969 566499 . - 0 ID=cds516;Parent=gene547;Dbxref=Genbank:WP_038432732.1;Name=WP_038432732.1;Note=catalyzes the hydrolysis of pyrophosphate to phosphate;gbkey=CDS;product=inorganic pyrophosphatase;protein_id=WP_038432732.1;transl_table=11 NZ_CP010441.1 RefSeq gene 566809 567765 . + . ID=gene548;Name=SH03_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02745;old_locus_tag=SH03_02740 NZ_CP010441.1 Protein Homology CDS 566809 567765 . + 0 ID=cds517;Parent=gene548;Dbxref=Genbank:WP_000265913.1;Name=WP_000265913.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_000265913.1;transl_table=11 NZ_CP010441.1 RefSeq gene 567905 569407 . + . ID=gene549;Name=SH03_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02750;old_locus_tag=SH03_02745 NZ_CP010441.1 Protein Homology CDS 567905 569407 . + 0 ID=cds518;Parent=gene549;Dbxref=Genbank:WP_000205805.1;Name=WP_000205805.1;gbkey=CDS;product=sugar ABC transporter ATPase;protein_id=WP_000205805.1;transl_table=11 NZ_CP010441.1 RefSeq gene 569421 570443 . + . ID=gene550;Name=SH03_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02755;old_locus_tag=SH03_02750 NZ_CP010441.1 Protein Homology CDS 569421 570443 . + 0 ID=cds519;Parent=gene550;Dbxref=Genbank:WP_001313531.1;Name=WP_001313531.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_001313531.1;transl_table=11 NZ_CP010441.1 RefSeq gene 570430 571425 . + . ID=gene551;Name=SH03_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02760;old_locus_tag=SH03_02755 NZ_CP010441.1 Protein Homology CDS 570430 571425 . + 0 ID=cds520;Parent=gene551;Dbxref=Genbank:WP_000596014.1;Name=WP_000596014.1;Note=membrane component of a putative sugar ABC transporter system;gbkey=CDS;product=ABC transporter permease;protein_id=WP_000596014.1;transl_table=11 NZ_CP010441.1 RefSeq gene 571458 572456 . - . ID=gene552;Name=SH03_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02765;old_locus_tag=SH03_02760 NZ_CP010441.1 Protein Homology CDS 571458 572456 . - 0 ID=cds521;Parent=gene552;Dbxref=Genbank:WP_000853753.1;Name=WP_000853753.1;Note=catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate;gbkey=CDS;product=fructose 1%2C6-bisphosphatase;protein_id=WP_000853753.1;transl_table=11 NZ_CP010441.1 RefSeq gene 572632 574005 . + . ID=gene553;Name=SH03_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02770;old_locus_tag=SH03_02765 NZ_CP010441.1 Protein Homology CDS 572632 574005 . + 0 ID=cds522;Parent=gene553;Dbxref=Genbank:WP_001219813.1;Name=WP_001219813.1;Note=ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan;gbkey=CDS;product=UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2%2C6-diaminoheptandioate ligase;protein_id=WP_001219813.1;transl_table=11 NZ_CP010441.1 RefSeq gene 574161 574712 . - . ID=gene554;Name=SH03_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02775;old_locus_tag=SH03_02770 NZ_CP010441.1 Protein Homology CDS 574161 574712 . - 0 ID=cds523;Parent=gene554;Dbxref=Genbank:WP_000166270.1;Name=WP_000166270.1;gbkey=CDS;product=ribosome-associated UPF0307 family protein;protein_id=WP_000166270.1;transl_table=11 NZ_CP010441.1 RefSeq gene 574806 576158 . + . ID=gene555;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;gene_synonym=tldE;locus_tag=SH03_RS02780;old_locus_tag=SH03_02775 NZ_CP010441.1 Protein Homology CDS 574806 576158 . + 0 ID=cds524;Parent=gene555;Dbxref=Genbank:WP_001162171.1;Name=WP_001162171.1;Note=protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD;gbkey=CDS;gene=pmbA;product=metalloprotease PmbA;protein_id=WP_001162171.1;transl_table=11 NZ_CP010441.1 RefSeq gene 576337 576702 . + . ID=gene556;Name=SH03_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02785;old_locus_tag=SH03_02780 NZ_CP010441.1 Protein Homology CDS 576337 576702 . + 0 ID=cds525;Parent=gene556;Dbxref=Genbank:WP_023649327.1;Name=WP_023649327.1;Note=electron transport protein;gbkey=CDS;product=cytochrome B562;protein_id=WP_023649327.1;transl_table=11 NZ_CP010441.1 RefSeq gene 576747 577211 . - . ID=gene557;Name=SH03_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02790;old_locus_tag=SH03_02785 NZ_CP010441.1 Protein Homology CDS 576747 577211 . - 0 ID=cds526;Parent=gene557;Dbxref=Genbank:WP_001106233.1;Name=WP_001106233.1;Note=activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions;gbkey=CDS;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_001106233.1;transl_table=11 NZ_CP010441.1 RefSeq gene 577369 579507 . - . ID=gene558;Name=SH03_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02795;old_locus_tag=SH03_02790 NZ_CP010441.1 Protein Homology CDS 577369 579507 . - 0 ID=cds527;Parent=gene558;Dbxref=Genbank:WP_000187778.1;Name=WP_000187778.1;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;gbkey=CDS;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_000187778.1;transl_table=11 NZ_CP010441.1 RefSeq gene 579901 581556 . - . ID=gene559;Name=SH03_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02800;old_locus_tag=SH03_02795 NZ_CP010441.1 Protein Homology CDS 579901 581556 . - 0 ID=cds528;Parent=gene559;Dbxref=Genbank:WP_001336303.1;Name=WP_001336303.1;gbkey=CDS;product=trehalose-6-phosphate hydrolase;protein_id=WP_001336303.1;transl_table=11 NZ_CP010441.1 RefSeq gene 581606 583024 . - . ID=gene560;Name=SH03_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02805;old_locus_tag=SH03_02800 NZ_CP010441.1 Protein Homology CDS 581606 583024 . - 0 ID=cds529;Parent=gene560;Dbxref=Genbank:WP_000036104.1;Name=WP_000036104.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS maltose transporter subunit IIBC;protein_id=WP_000036104.1;transl_table=11 NZ_CP010441.1 RefSeq gene 583146 584093 . - . ID=gene561;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=SH03_RS02810;old_locus_tag=SH03_02805 NZ_CP010441.1 Protein Homology CDS 583146 584093 . - 0 ID=cds530;Parent=gene561;Dbxref=Genbank:WP_038432735.1;Name=WP_038432735.1;Note=regulates genes involved in trehalose metabolism%3B binds the intermediate trehalose-6-phosphate%3B binds a dimer%3B regulates treBC operon;gbkey=CDS;gene=treR;product=trehalose repressor;protein_id=WP_038432735.1;transl_table=11 NZ_CP010441.1 RefSeq gene 584472 587168 . + . ID=gene562;Name=SH03_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02815;old_locus_tag=SH03_02810 NZ_CP010441.1 Protein Homology CDS 584472 587168 . + 0 ID=cds531;Parent=gene562;Dbxref=Genbank:WP_000471889.1;Name=WP_000471889.1;Note=P-type%3B involved in magnesium transport into the cytoplasm;gbkey=CDS;product=magnesium-translocating P-type ATPase;protein_id=WP_000471889.1;transl_table=11 NZ_CP010441.1 RefSeq gene 587374 587760 . - . ID=gene563;Name=SH03_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02820;old_locus_tag=SH03_02815 NZ_CP010441.1 Protein Homology CDS 587374 587760 . - 0 ID=cds532;Parent=gene563;Dbxref=Genbank:WP_000047539.1;Name=WP_000047539.1;Note=has endoribonuclease activity on mRNA;gbkey=CDS;product=reactive intermediate/imine deaminase;protein_id=WP_000047539.1;transl_table=11 NZ_CP010441.1 RefSeq gene 587833 588294 . - . ID=gene564;Name=SH03_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02825;old_locus_tag=SH03_02820 NZ_CP010441.1 Protein Homology CDS 587833 588294 . - 0 ID=cds533;Parent=gene564;Dbxref=Genbank:WP_000148581.1;Name=WP_000148581.1;Note=involved in the allosteric regulation of aspartate carbamoyltransferase;gbkey=CDS;product=aspartate carbamoyltransferase regulatory chain;protein_id=WP_000148581.1;transl_table=11 NZ_CP010441.1 RefSeq gene 588307 589242 . - . ID=gene565;Name=SH03_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02830;old_locus_tag=SH03_02825 NZ_CP010441.1 Protein Homology CDS 588307 589242 . - 0 ID=cds534;Parent=gene565;Dbxref=Genbank:WP_000013046.1;Name=WP_000013046.1;gbkey=CDS;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_000013046.1;transl_table=11 NZ_CP010441.1 RefSeq gene 589246 589380 . - . ID=gene566;Name=SH03_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02835;old_locus_tag=SH03_02830 NZ_CP010441.1 Protein Homology CDS 589246 589380 . - 0 ID=cds535;Parent=gene566;Dbxref=Genbank:WP_001296693.1;Name=WP_001296693.1;gbkey=CDS;product=pyrBI operon leader peptide;protein_id=WP_001296693.1;transl_table=11 NZ_CP010441.1 RefSeq gene 589360 589692 . + . ID=gene567;Name=SH03_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02840;old_locus_tag=SH03_02835 NZ_CP010441.1 Protein Homology CDS 589360 589692 . + 0 ID=cds536;Parent=gene567;Dbxref=Genbank:WP_001701421.1;Name=WP_001701421.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001701421.1;transl_table=11 NZ_CP010441.1 RefSeq gene 589661 590056 . - . ID=gene568;Name=SH03_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02845;old_locus_tag=SH03_02840 NZ_CP010441.1 Protein Homology CDS 589661 590056 . - 0 ID=cds537;Parent=gene568;Dbxref=Genbank:WP_000230281.1;Name=WP_000230281.1;gbkey=CDS;product=endoribonuclease L-PSP;protein_id=WP_000230281.1;transl_table=11 NZ_CP010441.1 RefSeq gene 590187 590900 . - . ID=gene569;Name=SH03_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02850;old_locus_tag=SH03_02845 NZ_CP010441.1 Protein Homology CDS 590187 590900 . - 0 ID=cds538;Parent=gene569;Dbxref=Genbank:WP_000500731.1;Name=WP_000500731.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_000500731.1;transl_table=11 NZ_CP010441.1 RefSeq gene 590971 591564 . + . ID=gene570;Name=SH03_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02855;old_locus_tag=SH03_02850 NZ_CP010441.1 Protein Homology CDS 590971 591564 . + 0 ID=cds539;Parent=gene570;Dbxref=Genbank:WP_000256658.1;Name=WP_000256658.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000256658.1;transl_table=11 NZ_CP010441.1 RefSeq gene 591709 592161 . + . ID=gene571;Name=SH03_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02860;old_locus_tag=SH03_02855 NZ_CP010441.1 Protein Homology CDS 591709 592161 . + 0 ID=cds540;Parent=gene571;Dbxref=Genbank:WP_000583469.1;Name=WP_000583469.1;gbkey=CDS;product=DUF386 domain-containing protein;protein_id=WP_000583469.1;transl_table=11 NZ_CP010441.1 RefSeq gene 592284 594098 . + . ID=gene572;Name=SH03_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02865;old_locus_tag=SH03_02860 NZ_CP010441.1 Protein Homology CDS 592284 594098 . + 0 ID=cds541;Parent=gene572;Dbxref=Genbank:WP_000036434.1;Name=WP_000036434.1;gbkey=CDS;product=SopA-central-domain-like hexapeptide repeat protein;protein_id=WP_000036434.1;transl_table=11 NZ_CP010441.1 RefSeq gene 594154 595158 . - . ID=gene573;Name=SH03_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02870;old_locus_tag=SH03_02865 NZ_CP010441.1 Protein Homology CDS 594154 595158 . - 0 ID=cds542;Parent=gene573;Dbxref=Genbank:WP_000012931.1;Name=WP_000012931.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;gbkey=CDS;product=ornithine carbamoyltransferase chain I;protein_id=WP_000012931.1;transl_table=11 NZ_CP010441.1 RefSeq gene 595320 595736 . + . ID=gene574;Name=SH03_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02875;old_locus_tag=SH03_02870 NZ_CP010441.1 Protein Homology CDS 595320 595736 . + 0 ID=cds543;Parent=gene574;Dbxref=Genbank:WP_000002953.1;Name=WP_000002953.1;gbkey=CDS;product=regulator of ribonuclease activity B;protein_id=WP_000002953.1;transl_table=11 NZ_CP010441.1 RefSeq gene 595881 596384 . - . ID=gene575;Name=SH03_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02880;old_locus_tag=SH03_02875 NZ_CP010441.1 Protein Homology CDS 595881 596384 . - 0 ID=cds544;Parent=gene575;Dbxref=Genbank:WP_001059402.1;Name=WP_001059402.1;gbkey=CDS;product=GNAT family acetyltransferase;protein_id=WP_001059402.1;transl_table=11 NZ_CP010441.1 RefSeq gene 596577 597773 . + . ID=gene576;Name=SH03_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02885;old_locus_tag=SH03_02880 NZ_CP010441.1 Protein Homology CDS 596577 597773 . + 0 ID=cds545;Parent=gene576;Dbxref=Genbank:WP_000079634.1;Name=WP_000079634.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000079634.1;transl_table=11 NZ_CP010441.1 RefSeq gene 597829 600684 . - . ID=gene577;Name=SH03_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02890;old_locus_tag=SH03_02885 NZ_CP010441.1 Protein Homology CDS 597829 600684 . - 0 ID=cds546;Parent=gene577;Dbxref=Genbank:WP_000416392.1;Name=WP_000416392.1;gbkey=CDS;product=valine--tRNA ligase;protein_id=WP_000416392.1;transl_table=11 NZ_CP010441.1 RefSeq gene 600684 601127 . - . ID=gene578;Name=SH03_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02895;old_locus_tag=SH03_02890 NZ_CP010441.1 Protein Homology CDS 600684 601127 . - 0 ID=cds547;Parent=gene578;Dbxref=Genbank:WP_000786400.1;Name=WP_000786400.1;Note=binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB;gbkey=CDS;product=DNA polymerase III subunit chi;protein_id=WP_000786400.1;transl_table=11 NZ_CP010441.1 RefSeq gene 601287 602798 . - . ID=gene579;Name=SH03_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02900;old_locus_tag=SH03_02895 NZ_CP010441.1 Protein Homology CDS 601287 602798 . - 0 ID=cds548;Parent=gene579;Dbxref=Genbank:WP_000397144.1;Name=WP_000397144.1;Note=catalyzes the removal of N-terminal amino acids preferably from various peptides%3B a cyteinylglycinase%2C transcription regulator and site-specific recombination factor;gbkey=CDS;product=cytosol aminopeptidase;protein_id=WP_000397144.1;transl_table=11 NZ_CP010441.1 RefSeq gene 603065 604165 . + . ID=gene580;Name=SH03_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02905;old_locus_tag=SH03_02900 NZ_CP010441.1 Protein Homology CDS 603065 604165 . + 0 ID=cds549;Parent=gene580;Dbxref=Genbank:WP_000584114.1;Name=WP_000584114.1;Note=with LptBGC is involved in lipopolysaccharide export;gbkey=CDS;product=LPS export ABC transporter permease LptF;protein_id=WP_000584114.1;transl_table=11 NZ_CP010441.1 RefSeq gene 604165 605247 . + . ID=gene581;Name=SH03_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02910;old_locus_tag=SH03_02905 NZ_CP010441.1 Protein Homology CDS 604165 605247 . + 0 ID=cds550;Parent=gene581;Dbxref=Genbank:WP_001295681.1;Name=WP_001295681.1;Note=with LptABCF is involved in the transport of lipopolysaccharides;gbkey=CDS;product=LPS export ABC transporter permease LptG;protein_id=WP_001295681.1;transl_table=11 NZ_CP010441.1 RefSeq gene 605408 606910 . - . ID=gene582;Name=SH03_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02915;old_locus_tag=SH03_02910 NZ_CP010441.1 Protein Homology CDS 605408 606910 . - 0 ID=cds551;Parent=gene582;Dbxref=Genbank:WP_001294573.1;Name=WP_001294573.1;gbkey=CDS;product=DUF853 domain-containing protein;protein_id=WP_001294573.1;transl_table=11 NZ_CP010441.1 RefSeq gene 606988 607986 . - . ID=gene583;Name=SH03_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02920;old_locus_tag=SH03_02915 NZ_CP010441.1 Protein Homology CDS 606988 607986 . - 0 ID=cds552;Parent=gene583;Dbxref=Genbank:WP_001309159.1;Name=WP_001309159.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001309159.1;transl_table=11 NZ_CP010441.1 RefSeq gene 608053 609372 . - . ID=gene584;Name=SH03_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02925;old_locus_tag=SH03_02920 NZ_CP010441.1 Protein Homology CDS 608053 609372 . - 0 ID=cds553;Parent=gene584;Dbxref=Genbank:WP_001128335.1;Name=WP_001128335.1;gbkey=CDS;product=gnt-II system L-idonate transporter;protein_id=WP_001128335.1;transl_table=11 NZ_CP010441.1 RefSeq gene 609434 610198 . - . ID=gene585;Name=SH03_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02930;old_locus_tag=SH03_02925 NZ_CP010441.1 Protein Homology CDS 609434 610198 . - 0 ID=cds554;Parent=gene585;Dbxref=Genbank:WP_000998695.1;Name=WP_000998695.1;Note=Involved in the nonphosphorylative%2C ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate;gbkey=CDS;product=gluconate 5-dehydrogenase;protein_id=WP_000998695.1;transl_table=11 NZ_CP010441.1 RefSeq gene 610222 611253 . - . ID=gene586;Name=SH03_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02935;old_locus_tag=SH03_02930 NZ_CP010441.1 Protein Homology CDS 610222 611253 . - 0 ID=cds555;Parent=gene586;Dbxref=Genbank:WP_001197411.1;Name=WP_001197411.1;Note=NAD-binding;gbkey=CDS;product=L-idonate 5-dehydrogenase (NAD(P)+);protein_id=WP_001197411.1;transl_table=11 NZ_CP010441.1 RefSeq gene 611470 612033 . + . ID=gene587;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=SH03_RS02940;old_locus_tag=SH03_02935 NZ_CP010441.1 Protein Homology CDS 611470 612033 . + 0 ID=cds556;Parent=gene587;Dbxref=Genbank:WP_000896738.1;Name=WP_000896738.1;gbkey=CDS;gene=idnK;product=thermosensitive gluconokinase;protein_id=WP_000896738.1;transl_table=11 NZ_CP010441.1 RefSeq gene 612037 613056 . - . ID=gene588;Name=SH03_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02945;old_locus_tag=SH03_02940 NZ_CP010441.1 Protein Homology CDS 612037 613056 . - 0 ID=cds557;Parent=gene588;Dbxref=Genbank:WP_001309160.1;Name=WP_001309160.1;gbkey=CDS;product=aldehyde reductase Ahr;protein_id=WP_001309160.1;transl_table=11 NZ_CP010441.1 RefSeq gene 613252 613336 . + . ID=gene589;Name=SH03_RS02950;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS02950;old_locus_tag=SH03_02945 NZ_CP010441.1 tRNAscan-SE tRNA 613252 613336 . + . ID=rna31;Parent=gene589;anticodon=(pos:613286..613288);gbkey=tRNA;product=tRNA-Leu NZ_CP010441.1 tRNAscan-SE exon 613252 613336 . + . ID=id45;Parent=rna31;anticodon=(pos:613286..613288);gbkey=tRNA;product=tRNA-Leu NZ_CP010441.1 RefSeq gene 613597 614787 . + . ID=gene590;Name=SH03_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02955;old_locus_tag=SH03_02950 NZ_CP010441.1 Protein Homology CDS 613597 614787 . + 0 ID=cds558;Parent=gene590;Dbxref=Genbank:WP_000550469.1;Name=WP_000550469.1;gbkey=CDS;product=integrase;protein_id=WP_000550469.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 615028 616359 . + . ID=id46;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 615073 615162 . - . ID=gene591;Name=SH03_RS02960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS02960;partial=true;pseudo=true;start_range=.,615073 NZ_CP010441.1 Protein Homology CDS 615073 615162 . - 0 ID=cds559;Parent=gene591;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=nitrite extrusion protein 2;pseudo=true;start_range=.,615073;transl_table=11 NZ_CP010441.1 RefSeq gene 615119 615484 . + . ID=gene592;Name=SH03_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02965;old_locus_tag=SH03_02960 NZ_CP010441.1 Protein Homology CDS 615119 615484 . + 0 ID=cds560;Parent=gene592;Dbxref=Genbank:WP_000567766.1;Name=WP_000567766.1;Note=represses IS2 gene transcription;gbkey=CDS;product=transposase;protein_id=WP_000567766.1;transl_table=11 NZ_CP010441.1 RefSeq gene 615442 616347 . + . ID=gene593;Name=SH03_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02970;old_locus_tag=SH03_02965 NZ_CP010441.1 Protein Homology CDS 615442 616347 . + 0 ID=cds561;Parent=gene593;Dbxref=Genbank:WP_000376502.1;Name=WP_000376502.1;gbkey=CDS;product=integrase;protein_id=WP_000376502.1;transl_table=11 NZ_CP010441.1 RefSeq gene 616524 617638 . - . ID=gene594;Name=SH03_RS22860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS22860;pseudo=true NZ_CP010441.1 Protein Homology CDS 616524 617638 . - 0 ID=cds562;Parent=gene594;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phosphoethanolamine transferase YjgX;pseudo=true;transl_except=(pos:complement(616890..616892)%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq gene 617905 618075 . + . ID=gene595;Name=SH03_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02985;old_locus_tag=SH03_02980 NZ_CP010441.1 Protein Homology CDS 617905 618075 . + 0 ID=cds563;Parent=gene595;Dbxref=Genbank:WP_015675048.1;Name=WP_015675048.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015675048.1;transl_table=11 NZ_CP010441.1 RefSeq gene 618129 618350 . + . ID=gene596;Name=SH03_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02990;old_locus_tag=SH03_02985 NZ_CP010441.1 Protein Homology CDS 618129 618350 . + 0 ID=cds564;Parent=gene596;Dbxref=Genbank:WP_001321299.1;Name=WP_001321299.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001321299.1;transl_table=11 NZ_CP010441.1 RefSeq gene 618779 618922 . + . ID=gene597;Name=SH03_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS02995;old_locus_tag=SH03_02990 NZ_CP010441.1 Protein Homology CDS 618779 618922 . + 0 ID=cds565;Parent=gene597;Dbxref=Genbank:WP_000050905.1;Name=WP_000050905.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000050905.1;transl_table=11 NZ_CP010441.1 RefSeq gene 618950 620278 . - . ID=gene598;Name=SH03_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03000;old_locus_tag=SH03_02995 NZ_CP010441.1 Protein Homology CDS 618950 620278 . - 0 ID=cds566;Parent=gene598;Dbxref=Genbank:WP_000547191.1;Name=WP_000547191.1;gbkey=CDS;product=transposase;protein_id=WP_000547191.1;transl_table=11 NZ_CP010441.1 RefSeq gene 620905 622122 . + . ID=gene599;Name=SH03_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03005;old_locus_tag=SH03_03000 NZ_CP010441.1 Protein Homology CDS 620905 622122 . + 0 ID=cds567;Parent=gene599;Dbxref=Genbank:WP_000179691.1;Name=WP_000179691.1;gbkey=CDS;product=MFS transporter membrane protein;protein_id=WP_000179691.1;transl_table=11 NZ_CP010441.1 RefSeq gene 622134 623252 . + . ID=gene600;Name=SH03_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03010;old_locus_tag=SH03_03005 NZ_CP010441.1 Protein Homology CDS 622134 623252 . + 0 ID=cds568;Parent=gene600;Dbxref=Genbank:WP_000611568.1;Name=WP_000611568.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_000611568.1;transl_table=11 NZ_CP010441.1 RefSeq gene 623473 623730 . - . ID=gene601;Name=SH03_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03015;old_locus_tag=SH03_03010 NZ_CP010441.1 Protein Homology CDS 623473 623730 . - 0 ID=cds569;Parent=gene601;Dbxref=Genbank:WP_000254999.1;Name=WP_000254999.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000254999.1;transl_table=11 NZ_CP010441.1 RefSeq gene 623753 623956 . + . ID=gene602;Name=SH03_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03020;old_locus_tag=SH03_03015 NZ_CP010441.1 Protein Homology CDS 623753 623956 . + 0 ID=cds570;Parent=gene602;Dbxref=Genbank:WP_000355616.1;Name=WP_000355616.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000355616.1;transl_table=11 NZ_CP010441.1 RefSeq gene 624008 624310 . + . ID=gene603;Name=SH03_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03025;old_locus_tag=SH03_03020 NZ_CP010441.1 Protein Homology CDS 624008 624310 . + 0 ID=cds571;Parent=gene603;Dbxref=Genbank:WP_032244723.1;Name=WP_032244723.1;gbkey=CDS;product=transposase;protein_id=WP_032244723.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 624305 625543 . + . ID=id47;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 624313 625464 . - . ID=gene604;Name=SH03_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03030;old_locus_tag=SH03_03025 NZ_CP010441.1 Protein Homology CDS 624313 625464 . - 0 ID=cds572;Parent=gene604;Dbxref=Genbank:WP_001254932.1;Name=WP_001254932.1;gbkey=CDS;product=transposase;protein_id=WP_001254932.1;transl_table=11 NZ_CP010441.1 RefSeq gene 625421 625789 . - . ID=gene605;Name=SH03_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03035;old_locus_tag=SH03_03030 NZ_CP010441.1 Protein Homology CDS 625421 625789 . - 0 ID=cds573;Parent=gene605;Dbxref=Genbank:WP_000088395.1;Name=WP_000088395.1;gbkey=CDS;product=transposase;protein_id=WP_000088395.1;transl_table=11 NZ_CP010441.1 RefSeq gene 625805 626640 . + . ID=gene606;Name=SH03_RS03040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS03040;pseudo=true NZ_CP010441.1 Protein Homology CDS 625805 626640 . + 0 ID=cds574;Parent=gene606;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 626723 626980 . + . ID=gene607;Name=SH03_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03045;old_locus_tag=SH03_03040 NZ_CP010441.1 Protein Homology CDS 626723 626980 . + 0 ID=cds575;Parent=gene607;Dbxref=Genbank:WP_000177057.1;Name=WP_000177057.1;gbkey=CDS;product=transporter;protein_id=WP_000177057.1;transl_table=11 NZ_CP010441.1 RefSeq gene 627537 628304 . - . ID=gene608;Name=SH03_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03050;old_locus_tag=SH03_03045 NZ_CP010441.1 Protein Homology CDS 627537 628304 . - 0 ID=cds576;Parent=gene608;Dbxref=Genbank:WP_000175457.1;Name=WP_000175457.1;gbkey=CDS;product=Fe(3+) dicitrate transport ATP-binding protein FecE;protein_id=WP_000175457.1;transl_table=11 NZ_CP010441.1 RefSeq gene 628305 629261 . - . ID=gene609;Name=fecD;gbkey=Gene;gene=fecD;gene_biotype=protein_coding;locus_tag=SH03_RS03055;old_locus_tag=SH03_03050 NZ_CP010441.1 Protein Homology CDS 628305 629261 . - 0 ID=cds577;Parent=gene609;Dbxref=Genbank:WP_000684852.1;Name=WP_000684852.1;Note=Ferric citrate binds FecA and is transported across the outer membrane while transmits a signal across the cytoplasmic membrane protein FecR. FecR transmits a signal across the membrane and activates the cytoplasmic FecI that directs the RNA polymerase to express the fecABCDE operon (which encodes the ferric citrate outer membrane receptor and the ferric citrate ABC transporter)%2C as well as fecIR. FecD is one of two (along with FecC) integral membrane protein components of the iron dicitrate ABC transporter.;gbkey=CDS;gene=fecD;product=Fe(3+) dicitrate ABC transporter permease;protein_id=WP_000684852.1;transl_table=11 NZ_CP010441.1 RefSeq gene 629258 630256 . - . ID=gene610;Name=fecC;gbkey=Gene;gene=fecC;gene_biotype=protein_coding;locus_tag=SH03_RS03060;old_locus_tag=SH03_03055 NZ_CP010441.1 Protein Homology CDS 629258 630256 . - 0 ID=cds578;Parent=gene610;Dbxref=Genbank:WP_000125187.1;Name=WP_000125187.1;Note=part of the FecBCDE citrate-dependent iron (III) transport system;gbkey=CDS;gene=fecC;product=Fe(3+) dicitrate ABC transporter permease;protein_id=WP_000125187.1;transl_table=11 NZ_CP010441.1 RefSeq gene 630253 631155 . - . ID=gene611;Name=fecB;gbkey=Gene;gene=fecB;gene_biotype=protein_coding;locus_tag=SH03_RS03065;old_locus_tag=SH03_03060 NZ_CP010441.1 Protein Homology CDS 630253 631155 . - 0 ID=cds579;Parent=gene611;Dbxref=Genbank:WP_000879155.1;Name=WP_000879155.1;Note=part of the ABC transporter involved in the uptake of citrate-dependent Fe(3+);gbkey=CDS;gene=fecB;product=Fe(3+) dicitrate-binding periplasmic protein;protein_id=WP_000879155.1;transl_table=11 NZ_CP010441.1 RefSeq gene 631200 633524 . - . ID=gene612;Name=SH03_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03070;old_locus_tag=SH03_03065 NZ_CP010441.1 Protein Homology CDS 631200 633524 . - 0 ID=cds580;Parent=gene612;Dbxref=Genbank:WP_000188283.1;Name=WP_000188283.1;gbkey=CDS;product=fe(3+) dicitrate transporter fecA;protein_id=WP_000188283.1;transl_table=11 NZ_CP010441.1 RefSeq gene 633611 634564 . - . ID=gene613;Name=SH03_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03075;old_locus_tag=SH03_03070 NZ_CP010441.1 Protein Homology CDS 633611 634564 . - 0 ID=cds581;Parent=gene613;Dbxref=Genbank:WP_001068910.1;Name=WP_001068910.1;Note=with FecA forms the FecAR signal transduction system%3B ferric citrate binds FecA and transmits a signal across the outer membrane to FecR. FecR transmits a signal across the cytoplasmic membrane and activates the sigma 70 protein FecI that directs the RNA polymerase to express the fecABCDE operon;gbkey=CDS;product=protein FecR;protein_id=WP_001068910.1;transl_table=11 NZ_CP010441.1 RefSeq gene 634561 635082 . - . ID=gene614;Name=SH03_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03080;old_locus_tag=SH03_03075 NZ_CP010441.1 Protein Homology CDS 634561 635082 . - 0 ID=cds582;Parent=gene614;Dbxref=Genbank:WP_001283626.1;Name=WP_001283626.1;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor regulates the genes for iron dicitrate transport;gbkey=CDS;product=RNA polymerase sigma factor FecI;protein_id=WP_001283626.1;transl_table=11 NZ_CP010441.1 RefSeq gene 635293 635493 . - . ID=gene615;Name=SH03_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03085;old_locus_tag=SH03_03080 NZ_CP010441.1 Protein Homology CDS 635293 635493 . - 0 ID=cds583;Parent=gene615;Dbxref=Genbank:WP_032142331.1;Name=WP_032142331.1;gbkey=CDS;product=transposase;protein_id=WP_032142331.1;transl_table=11 NZ_CP010441.1 RefSeq gene 635568 635861 . + . ID=gene616;Name=SH03_RS22865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22865 NZ_CP010441.1 Protein Homology CDS 635568 635861 . + 0 ID=cds584;Parent=gene616;Dbxref=Genbank:WP_000089811.1;Name=WP_000089811.1;gbkey=CDS;product=transposase;protein_id=WP_000089811.1;transl_table=11 NZ_CP010441.1 RefSeq gene 635862 636071 . + . ID=gene617;Name=SH03_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03095;old_locus_tag=SH03_03090 NZ_CP010441.1 Protein Homology CDS 635862 636071 . + 0 ID=cds585;Parent=gene617;Dbxref=Genbank:WP_000129482.1;Name=WP_000129482.1;gbkey=CDS;product=transposase;protein_id=WP_000129482.1;transl_table=11 NZ_CP010441.1 RefSeq gene 636185 637171 . - . ID=gene618;Name=SH03_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03100;old_locus_tag=SH03_03095 NZ_CP010441.1 Protein Homology CDS 636185 637171 . - 0 ID=cds586;Parent=gene618;Dbxref=Genbank:WP_000373366.1;Name=WP_000373366.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000373366.1;transl_table=11 NZ_CP010441.1 RefSeq gene 637271 637441 . - . ID=gene619;Name=SH03_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03105;old_locus_tag=SH03_03100 NZ_CP010441.1 Protein Homology CDS 637271 637441 . - 0 ID=cds587;Parent=gene619;Dbxref=Genbank:WP_001323213.1;Name=WP_001323213.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001323213.1;transl_table=11 NZ_CP010441.1 RefSeq gene 637518 638867 . - . ID=gene620;Name=SH03_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03110;old_locus_tag=SH03_03105 NZ_CP010441.1 Protein Homology CDS 637518 638867 . - 0 ID=cds588;Parent=gene620;Dbxref=Genbank:WP_001128363.1;Name=WP_001128363.1;gbkey=CDS;product=transporter;protein_id=WP_001128363.1;transl_table=11 NZ_CP010441.1 RefSeq gene 638974 640941 . - . ID=gene621;Name=SH03_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03115;old_locus_tag=SH03_03110 NZ_CP010441.1 Protein Homology CDS 638974 640941 . - 0 ID=cds589;Parent=gene621;Dbxref=Genbank:WP_000116326.1;Name=WP_000116326.1;gbkey=CDS;product=dehydratase;protein_id=WP_000116326.1;transl_table=11 NZ_CP010441.1 RefSeq gene 640952 641887 . - . ID=gene622;Name=SH03_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03120;old_locus_tag=SH03_03115 NZ_CP010441.1 Protein Homology CDS 640952 641887 . - 0 ID=cds590;Parent=gene622;Dbxref=Genbank:WP_000109145.1;Name=WP_000109145.1;gbkey=CDS;product=2-keto-3-deoxy-galactonate aldolase;protein_id=WP_000109145.1;transl_table=11 NZ_CP010441.1 RefSeq gene 641862 642650 . - . ID=gene623;Name=SH03_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03125;old_locus_tag=SH03_03120 NZ_CP010441.1 Protein Homology CDS 641862 642650 . - 0 ID=cds591;Parent=gene623;Dbxref=Genbank:WP_000251798.1;Name=WP_000251798.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000251798.1;transl_table=11 NZ_CP010441.1 RefSeq gene 642953 643735 . - . ID=gene624;Name=SH03_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03130;old_locus_tag=SH03_03125 NZ_CP010441.1 Protein Homology CDS 642953 643735 . - 0 ID=cds592;Parent=gene624;Dbxref=Genbank:WP_000082780.1;Name=WP_000082780.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000082780.1;transl_table=11 NZ_CP010441.1 RefSeq gene 643752 644384 . - . ID=gene625;Name=SH03_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03135;old_locus_tag=SH03_03130 NZ_CP010441.1 Protein Homology CDS 643752 644384 . - 0 ID=cds593;Parent=gene625;Dbxref=Genbank:WP_000600622.1;Name=WP_000600622.1;gbkey=CDS;product=protein SgcE;protein_id=WP_000600622.1;transl_table=11 NZ_CP010441.1 RefSeq gene 644396 644827 . - . ID=gene626;Name=SH03_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03140;old_locus_tag=SH03_03135 NZ_CP010441.1 Protein Homology CDS 644396 644827 . - 0 ID=cds594;Parent=gene626;Dbxref=Genbank:WP_000606406.1;Name=WP_000606406.1;gbkey=CDS;product=phosphotransferase enzyme IIA component;protein_id=WP_000606406.1;transl_table=11 NZ_CP010441.1 RefSeq gene 644958 645764 . - . ID=gene627;Name=SH03_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03145;old_locus_tag=SH03_03140 NZ_CP010441.1 Protein Homology CDS 644958 645764 . - 0 ID=cds595;Parent=gene627;Dbxref=Genbank:WP_000118626.1;Name=WP_000118626.1;gbkey=CDS;product=nucleoside triphosphatase;protein_id=WP_000118626.1;transl_table=11 NZ_CP010441.1 RefSeq gene 645777 647090 . - . ID=gene628;Name=SH03_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03150;old_locus_tag=SH03_03145 NZ_CP010441.1 Protein Homology CDS 645777 647090 . - 0 ID=cds596;Parent=gene628;Dbxref=Genbank:WP_000460843.1;Name=WP_000460843.1;gbkey=CDS;product=PTS system EIIC permease component;protein_id=WP_000460843.1;transl_table=11 NZ_CP010441.1 RefSeq gene 647102 647383 . - . ID=gene629;Name=SH03_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03155;old_locus_tag=SH03_03150 NZ_CP010441.1 Protein Homology CDS 647102 647383 . - 0 ID=cds597;Parent=gene629;Dbxref=Genbank:WP_024165496.1;Name=WP_024165496.1;gbkey=CDS;product=PTS sugar transporter subunit IIB;protein_id=WP_024165496.1;transl_table=11 NZ_CP010441.1 RefSeq gene 647377 648498 . - . ID=gene630;Name=SH03_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03160;old_locus_tag=SH03_03155 NZ_CP010441.1 Protein Homology CDS 647377 648498 . - 0 ID=cds598;Parent=gene630;Dbxref=Genbank:WP_000010829.1;Name=WP_000010829.1;gbkey=CDS;product=endoglucanase;protein_id=WP_000010829.1;transl_table=11 NZ_CP010441.1 RefSeq gene 649284 650030 . - . ID=gene631;Name=SH03_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03165;old_locus_tag=SH03_03160 NZ_CP010441.1 Protein Homology CDS 649284 650030 . - 0 ID=cds599;Parent=gene631;Dbxref=Genbank:WP_000354251.1;Name=WP_000354251.1;gbkey=CDS;product=methyltransferase;protein_id=WP_000354251.1;transl_table=11 NZ_CP010441.1 RefSeq gene 650086 650631 . - . ID=gene632;Name=SH03_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03170;old_locus_tag=SH03_03165 NZ_CP010441.1 Protein Homology CDS 650086 650631 . - 0 ID=cds600;Parent=gene632;Dbxref=Genbank:WP_001309181.1;Name=WP_001309181.1;gbkey=CDS;product=GNAT family acetyltransferase;protein_id=WP_001309181.1;transl_table=11 NZ_CP010441.1 RefSeq gene 650643 650900 . - . ID=gene633;Name=SH03_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03175;old_locus_tag=SH03_03170 NZ_CP010441.1 Protein Homology CDS 650643 650900 . - 0 ID=cds601;Parent=gene633;Dbxref=Genbank:WP_001054376.1;Name=WP_001054376.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001054376.1;transl_table=11 NZ_CP010441.1 RefSeq gene 651391 651522 . - . ID=gene634;Name=SH03_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03180;old_locus_tag=SH03_03175 NZ_CP010441.1 Protein Homology CDS 651391 651522 . - 0 ID=cds602;Parent=gene634;Dbxref=Genbank:WP_001309182.1;Name=WP_001309182.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001309182.1;transl_table=11 NZ_CP010441.1 RefSeq gene 651686 651895 . + . ID=gene635;Name=SH03_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03185;old_locus_tag=SH03_03180 NZ_CP010441.1 Protein Homology CDS 651686 651895 . + 0 ID=cds603;Parent=gene635;Dbxref=Genbank:WP_001312503.1;Name=WP_001312503.1;gbkey=CDS;product=DNA helicase superfamily I;protein_id=WP_001312503.1;transl_table=11 NZ_CP010441.1 RefSeq gene 651862 652878 . + . ID=gene636;Name=SH03_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03190;old_locus_tag=SH03_03185 NZ_CP010441.1 Protein Homology CDS 651862 652878 . + 0 ID=cds604;Parent=gene636;Dbxref=Genbank:WP_001312504.1;Name=WP_001312504.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001312504.1;transl_table=11 NZ_CP010441.1 RefSeq gene 653461 654441 . - . ID=gene637;Name=SH03_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03195;old_locus_tag=SH03_03190 NZ_CP010441.1 Protein Homology CDS 653461 654441 . - 0 ID=cds605;Parent=gene637;Dbxref=Genbank:WP_000991438.1;Name=WP_000991438.1;gbkey=CDS;product=9-O-acetyl-N-acetylneuraminic acid deacetylase;protein_id=WP_000991438.1;transl_table=11 NZ_CP010441.1 RefSeq gene 654506 655612 . - . ID=gene638;Name=SH03_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03200;old_locus_tag=SH03_03195 NZ_CP010441.1 Protein Homology CDS 654506 655612 . - 0 ID=cds606;Parent=gene638;Dbxref=Genbank:WP_001309184.1;Name=WP_001309184.1;gbkey=CDS;product=N-acetylneuraminate epimerase;protein_id=WP_001309184.1;transl_table=11 NZ_CP010441.1 RefSeq gene 655632 656180 . - . ID=gene639;Name=SH03_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03205;old_locus_tag=SH03_03200 NZ_CP010441.1 Protein Homology CDS 655632 656180 . - 0 ID=cds607;Parent=gene639;Dbxref=Genbank:WP_000445580.1;Name=WP_000445580.1;gbkey=CDS;product=porin;protein_id=WP_000445580.1;transl_table=11 NZ_CP010441.1 RefSeq gene 656720 656866 . + . ID=gene640;Name=SH03_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03210;old_locus_tag=SH03_03205 NZ_CP010441.1 Protein Homology CDS 656720 656866 . + 0 ID=cds608;Parent=gene640;Dbxref=Genbank:WP_032083584.1;Name=WP_032083584.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032083584.1;transl_table=11 NZ_CP010441.1 RefSeq gene 657148 657543 . - . ID=gene641;Name=SH03_RS03215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS03215;pseudo=true NZ_CP010441.1 Protein Homology CDS 657148 657543 . - 0 ID=cds609;Parent=gene641;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(657277..657279)%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq gene 657804 658406 . + . ID=gene642;Name=SH03_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03220;old_locus_tag=SH03_03215 NZ_CP010441.1 Protein Homology CDS 657804 658406 . + 0 ID=cds610;Parent=gene642;Dbxref=Genbank:WP_000790583.1;Name=WP_000790583.1;gbkey=CDS;product=type 1 fimbriae regulatory protein FimB;protein_id=WP_000790583.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 658895 659665 . + . ID=id48;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 659146 659649 . + . ID=gene643;Name=SH03_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03225;old_locus_tag=SH03_03220 NZ_CP010441.1 Protein Homology CDS 659146 659649 . + 0 ID=cds611;Parent=gene643;Dbxref=Genbank:WP_001119362.1;Name=WP_001119362.1;gbkey=CDS;product=transposase;protein_id=WP_001119362.1;transl_table=11 NZ_CP010441.1 RefSeq gene 659702 660256 . + . ID=gene644;Name=SH03_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03230;old_locus_tag=SH03_03225 NZ_CP010441.1 Protein Homology CDS 659702 660256 . + 0 ID=cds612;Parent=gene644;Dbxref=Genbank:WP_000983104.1;Name=WP_000983104.1;Note=inversion of on/off regulator of fimA;gbkey=CDS;product=tyrosine recombinase;protein_id=WP_000983104.1;transl_table=11 NZ_CP010441.1 RefSeq gene 660336 660524 . - . ID=gene645;Name=SH03_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03235;old_locus_tag=SH03_03230 NZ_CP010441.1 Protein Homology CDS 660336 660524 . - 0 ID=cds613;Parent=gene645;Dbxref=Genbank:WP_032139953.1;Name=WP_032139953.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032139953.1;transl_table=11 NZ_CP010441.1 RefSeq gene 660738 661286 . + . ID=gene646;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=SH03_RS03240;old_locus_tag=SH03_03235 NZ_CP010441.1 Protein Homology CDS 660738 661286 . + 0 ID=cds614;Parent=gene646;Dbxref=Genbank:WP_000695564.1;Name=WP_000695564.1;gbkey=CDS;gene=fimA;product=type-1 fimbrial protein%2C A chain;protein_id=WP_000695564.1;transl_table=11 NZ_CP010441.1 RefSeq gene 661393 661890 . + . ID=gene647;Name=SH03_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03245;old_locus_tag=SH03_03240 NZ_CP010441.1 Protein Homology CDS 661393 661890 . + 0 ID=cds615;Parent=gene647;Dbxref=Genbank:WP_000457578.1;Name=WP_000457578.1;gbkey=CDS;product=fimbrin fimI;protein_id=WP_000457578.1;transl_table=11 NZ_CP010441.1 RefSeq gene 661927 662652 . + . ID=gene648;Name=SH03_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03250;old_locus_tag=SH03_03245 NZ_CP010441.1 Protein Homology CDS 661927 662652 . + 0 ID=cds616;Parent=gene648;Dbxref=Genbank:WP_000066547.1;Name=WP_000066547.1;gbkey=CDS;product=chaperone protein FimC;protein_id=WP_000066547.1;transl_table=11 NZ_CP010441.1 RefSeq gene 662719 665355 . + . ID=gene649;Name=SH03_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03255;old_locus_tag=SH03_03250 NZ_CP010441.1 Protein Homology CDS 662719 665355 . + 0 ID=cds617;Parent=gene649;Dbxref=Genbank:WP_000121005.1;Name=WP_000121005.1;gbkey=CDS;product=outer membrane usher protein FimD;protein_id=WP_000121005.1;transl_table=11 NZ_CP010441.1 RefSeq gene 665365 665895 . + . ID=gene650;Name=SH03_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03260;old_locus_tag=SH03_03255 NZ_CP010441.1 Protein Homology CDS 665365 665895 . + 0 ID=cds618;Parent=gene650;Dbxref=Genbank:WP_001244827.1;Name=WP_001244827.1;gbkey=CDS;product=protein FimF;protein_id=WP_001244827.1;transl_table=11 NZ_CP010441.1 RefSeq gene 665908 666411 . + . ID=gene651;Name=SH03_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03265;old_locus_tag=SH03_03260 NZ_CP010441.1 Protein Homology CDS 665908 666411 . + 0 ID=cds619;Parent=gene651;Dbxref=Genbank:WP_000870592.1;Name=WP_000870592.1;gbkey=CDS;product=protein FimG;protein_id=WP_000870592.1;transl_table=11 NZ_CP010441.1 RefSeq gene 666431 667333 . + . ID=gene652;Name=SH03_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03270;old_locus_tag=SH03_03265 NZ_CP010441.1 Protein Homology CDS 666431 667333 . + 0 ID=cds620;Parent=gene652;Dbxref=Genbank:WP_000832247.1;Name=WP_000832247.1;gbkey=CDS;product=protein FimH;protein_id=WP_000832247.1;transl_table=11 NZ_CP010441.1 RefSeq gene 667576 668919 . - . ID=gene653;Name=SH03_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03275;old_locus_tag=SH03_03270 NZ_CP010441.1 Protein Homology CDS 667576 668919 . - 0 ID=cds621;Parent=gene653;Dbxref=Genbank:WP_000558251.1;Name=WP_000558251.1;gbkey=CDS;product=gluconate transporter;protein_id=WP_000558251.1;transl_table=11 NZ_CP010441.1 RefSeq gene 669077 669307 . + . ID=gene654;Name=SH03_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03280;old_locus_tag=SH03_03275 NZ_CP010441.1 Protein Homology CDS 669077 669307 . + 0 ID=cds622;Parent=gene654;Dbxref=Genbank:WP_001332880.1;Name=WP_001332880.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001332880.1;transl_table=11 NZ_CP010441.1 RefSeq gene 669259 670443 . + . ID=gene655;Name=SH03_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03285;old_locus_tag=SH03_03280 NZ_CP010441.1 Protein Homology CDS 669259 670443 . + 0 ID=cds623;Parent=gene655;Dbxref=Genbank:WP_000438562.1;Name=WP_000438562.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate;gbkey=CDS;product=mannonate dehydratase;protein_id=WP_000438562.1;transl_table=11 NZ_CP010441.1 RefSeq gene 670524 671984 . + . ID=gene656;Name=SH03_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03290;old_locus_tag=SH03_03285 NZ_CP010441.1 Protein Homology CDS 670524 671984 . + 0 ID=cds624;Parent=gene656;Dbxref=Genbank:WP_000208205.1;Name=WP_000208205.1;gbkey=CDS;product=D-mannonate oxidoreductase;protein_id=WP_000208205.1;transl_table=11 NZ_CP010441.1 RefSeq gene 672006 672200 . - . ID=gene657;Name=SH03_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03295;old_locus_tag=SH03_03290 NZ_CP010441.1 Protein Homology CDS 672006 672200 . - 0 ID=cds625;Parent=gene657;Dbxref=Genbank:WP_000242065.1;Name=WP_000242065.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000242065.1;transl_table=11 NZ_CP010441.1 RefSeq gene 672199 672972 . + . ID=gene658;Name=SH03_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03300;old_locus_tag=SH03_03295 NZ_CP010441.1 Protein Homology CDS 672199 672972 . + 0 ID=cds626;Parent=gene658;Dbxref=Genbank:WP_000833679.1;Name=WP_000833679.1;Note=regulates the expression of uxuBA;gbkey=CDS;product=Uxu operon transcriptional regulator;protein_id=WP_000833679.1;transl_table=11 NZ_CP010441.1 RefSeq gene 673113 673943 . - . ID=gene659;Name=SH03_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03305;old_locus_tag=SH03_03300 NZ_CP010441.1 Protein Homology CDS 673113 673943 . - 0 ID=cds627;Parent=gene659;Dbxref=Genbank:WP_000062552.1;Name=WP_000062552.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000062552.1;transl_table=11 NZ_CP010441.1 RefSeq gene 673861 674034 . - . ID=gene660;Name=SH03_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03310;old_locus_tag=SH03_03305 NZ_CP010441.1 Protein Homology CDS 673861 674034 . - 0 ID=cds628;Parent=gene660;Dbxref=Genbank:WP_012602673.1;Name=WP_012602673.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012602673.1;transl_table=11 NZ_CP010441.1 RefSeq gene 674516 674650 . + . ID=gene661;Name=SH03_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03320;old_locus_tag=SH03_03315 NZ_CP010441.1 Protein Homology CDS 674516 674650 . + 0 ID=cds629;Parent=gene661;Dbxref=Genbank:WP_001312509.1;Name=WP_001312509.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001312509.1;transl_table=11 NZ_CP010441.1 RefSeq gene 674616 675008 . + . ID=gene662;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=SH03_RS03325;old_locus_tag=SH03_03320 NZ_CP010441.1 Protein Homology CDS 674616 675008 . + 0 ID=cds630;Parent=gene662;Dbxref=Genbank:WP_001309187.1;Name=WP_001309187.1;Note=inhibitor of RssB activity in response to DNA damage%3B blocks degradation of stationary phase sigma factor RpoS;gbkey=CDS;gene=iraD;product=anti-adapter protein IraD;protein_id=WP_001309187.1;transl_table=11 NZ_CP010441.1 RefSeq gene 675001 675912 . - . ID=gene663;Name=SH03_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03330;old_locus_tag=SH03_03325 NZ_CP010441.1 Protein Homology CDS 675001 675912 . - 0 ID=cds631;Parent=gene663;Dbxref=Genbank:WP_000340740.1;Name=WP_000340740.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000340740.1;transl_table=11 NZ_CP010441.1 RefSeq gene 675977 677149 . - . ID=gene664;Name=SH03_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03335;old_locus_tag=SH03_03330 NZ_CP010441.1 Protein Homology CDS 675977 677149 . - 0 ID=cds632;Parent=gene664;Dbxref=Genbank:WP_000568432.1;Name=WP_000568432.1;gbkey=CDS;product=isoaspartyl dipeptidase;protein_id=WP_000568432.1;transl_table=11 NZ_CP010441.1 RefSeq gene 677162 677623 . - . ID=gene665;Name=SH03_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03340;old_locus_tag=SH03_03335 NZ_CP010441.1 Protein Homology CDS 677162 677623 . - 0 ID=cds633;Parent=gene665;Dbxref=Genbank:WP_000211971.1;Name=WP_000211971.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000211971.1;transl_table=11 NZ_CP010441.1 RefSeq gene 677620 678303 . - . ID=gene666;Name=SH03_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03345;old_locus_tag=SH03_03340 NZ_CP010441.1 Protein Homology CDS 677620 678303 . - 0 ID=cds634;Parent=gene666;Dbxref=Genbank:WP_001295597.1;Name=WP_001295597.1;gbkey=CDS;product=nucleoside recognition pore and gate family inner membrane transporter;protein_id=WP_001295597.1;transl_table=11 NZ_CP010441.1 RefSeq gene 678553 679107 . + . ID=gene667;Name=SH03_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03350;old_locus_tag=SH03_03345 NZ_CP010441.1 Protein Homology CDS 678553 679107 . + 0 ID=cds635;Parent=gene667;Dbxref=Genbank:WP_001151855.1;Name=WP_001151855.1;Note=in yeast cells this enzyme removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''-cyclic phosphate%3B functions in tRNA splicing%3B the function and substrate of bacterial enzymes in organisms that do not perform splicing is unknown;gbkey=CDS;product=RNA 2'-phosphotransferase;protein_id=WP_001151855.1;transl_table=11 NZ_CP010441.1 RefSeq gene 679120 680298 . - . ID=gene668;Name=SH03_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03355;old_locus_tag=SH03_03350 NZ_CP010441.1 Protein Homology CDS 679120 680298 . - 0 ID=cds636;Parent=gene668;Dbxref=Genbank:WP_001141220.1;Name=WP_001141220.1;gbkey=CDS;product=DUF1228 family inner membrane MFS superfamily transporter;protein_id=WP_001141220.1;transl_table=11 NZ_CP010441.1 RefSeq gene 680366 681226 . - . ID=gene669;Name=SH03_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03360;old_locus_tag=SH03_03355 NZ_CP010441.1 Protein Homology CDS 680366 681226 . - 0 ID=cds637;Parent=gene669;Dbxref=Genbank:WP_001350572.1;Name=WP_001350572.1;gbkey=CDS;product=SdiA-regulated family membrane-anchored protein%3B phytase-like esterase;protein_id=WP_001350572.1;transl_table=11 NZ_CP010441.1 RefSeq gene 681291 681548 . - . ID=gene670;Name=SH03_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03365;old_locus_tag=SH03_03360 NZ_CP010441.1 Protein Homology CDS 681291 681548 . - 0 ID=cds638;Parent=gene670;Dbxref=Genbank:WP_000657675.1;Name=WP_000657675.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000657675.1;transl_table=11 NZ_CP010441.1 RefSeq gene 681545 682312 . - . ID=gene671;Name=SH03_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03370;old_locus_tag=SH03_03365 NZ_CP010441.1 Protein Homology CDS 681545 682312 . - 0 ID=cds639;Parent=gene671;Dbxref=Genbank:WP_000331745.1;Name=WP_000331745.1;gbkey=CDS;product=2-hydroxyglutaryl-CoA dehydratase activator;protein_id=WP_000331745.1;transl_table=11 NZ_CP010441.1 RefSeq gene 682322 683473 . - . ID=gene672;Name=SH03_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03375;old_locus_tag=SH03_03370 NZ_CP010441.1 Protein Homology CDS 682322 683473 . - 0 ID=cds640;Parent=gene672;Dbxref=Genbank:WP_001300012.1;Name=WP_001300012.1;gbkey=CDS;product=2-hydroxyglutaryl-CoA dehydratase;protein_id=WP_001300012.1;transl_table=11 NZ_CP010441.1 RefSeq gene 683589 684869 . - . ID=gene673;Name=SH03_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03380;old_locus_tag=SH03_03375 NZ_CP010441.1 Protein Homology CDS 683589 684869 . - 0 ID=cds641;Parent=gene673;Dbxref=Genbank:WP_001037419.1;Name=WP_001037419.1;gbkey=CDS;product=zinc-type alcohol dehydrogenase-like protein;protein_id=WP_001037419.1;transl_table=11 NZ_CP010441.1 RefSeq gene 684910 686142 . - . ID=gene674;Name=SH03_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03385;old_locus_tag=SH03_03380 NZ_CP010441.1 Protein Homology CDS 684910 686142 . - 0 ID=cds642;Parent=gene674;Dbxref=Genbank:WP_001137036.1;Name=WP_001137036.1;Note=is involved in resistance to acriflavine%2C chloramphenicol%2C norfloxacin%2C ethidium bromide and TPP;gbkey=CDS;product=multidrug resistance protein MdtM;protein_id=WP_001137036.1;transl_table=11 NZ_CP010441.1 RefSeq gene 686621 687541 . + . ID=gene675;Name=SH03_RS03390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS03390;pseudo=true NZ_CP010441.1 Protein Homology CDS 686621 687541 . + 0 ID=cds643;Parent=gene675;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:686930..686932%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq gene 687785 689197 . - . ID=gene676;Name=SH03_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03395;old_locus_tag=SH03_03390 NZ_CP010441.1 Protein Homology CDS 687785 689197 . - 0 ID=cds644;Parent=gene676;Dbxref=Genbank:WP_000199300.1;Name=WP_000199300.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000199300.1;transl_table=11 NZ_CP010441.1 RefSeq gene 689374 689538 . + . ID=gene677;Name=SH03_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03400;old_locus_tag=SH03_03395 NZ_CP010441.1 Protein Homology CDS 689374 689538 . + 0 ID=cds645;Parent=gene677;Dbxref=Genbank:WP_000394280.1;Name=WP_000394280.1;gbkey=CDS;product=DUF1127 domain-containing protein;protein_id=WP_000394280.1;transl_table=11 NZ_CP010441.1 RefSeq gene 689989 691554 . + . ID=gene678;Name=SH03_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03405;old_locus_tag=SH03_03400 NZ_CP010441.1 Protein Homology CDS 689989 691554 . + 0 ID=cds646;Parent=gene678;Dbxref=Genbank:WP_000964362.1;Name=WP_000964362.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000964362.1;transl_table=11 NZ_CP010441.1 RefSeq gene 691758 694478 . + . ID=gene679;Name=SH03_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03410;old_locus_tag=SH03_03405 NZ_CP010441.1 Protein Homology CDS 691758 694478 . + 0 ID=cds647;Parent=gene679;Dbxref=Genbank:WP_014639049.1;Name=WP_014639049.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_014639049.1;transl_table=11 NZ_CP010441.1 RefSeq gene 694535 695611 . - . ID=gene680;Name=SH03_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03415;old_locus_tag=SH03_03410 NZ_CP010441.1 Protein Homology CDS 694535 695611 . - 0 ID=cds648;Parent=gene680;Dbxref=Genbank:WP_000372671.1;Name=WP_000372671.1;gbkey=CDS;product=protein mcrC;protein_id=WP_000372671.1;transl_table=11 NZ_CP010441.1 RefSeq gene 695581 696960 . - . ID=gene681;Name=SH03_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03420;old_locus_tag=SH03_03415 NZ_CP010441.1 Protein Homology CDS 695581 696960 . - 0 ID=cds649;Parent=gene681;Dbxref=Genbank:WP_000443951.1;Name=WP_000443951.1;Note=McrB protein together with McrC forms the McrBC restriction system%3B recognizes N4- and C5-methylcytosine (and 5-hydroxy-methylcytosines)%3B appears to act against 5-methylcytosine preceded by a purine residue;gbkey=CDS;product=5-methylcytosine-specific restriction enzyme B;protein_id=WP_000443951.1;transl_table=11 NZ_CP010441.1 RefSeq gene 697122 697463 . - . ID=gene682;Name=SH03_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03425;old_locus_tag=SH03_03420 NZ_CP010441.1 Protein Homology CDS 697122 697463 . - 0 ID=cds650;Parent=gene682;Dbxref=Genbank:WP_000132601.1;Name=WP_000132601.1;Note=involved in the degradation of RNA%3B may be involved in the recycling of RNA during the SOS response;gbkey=CDS;product=hypothetical protein;protein_id=WP_000132601.1;transl_table=11 NZ_CP010441.1 RefSeq gene 697691 699085 . - . ID=gene683;Name=SH03_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03430;old_locus_tag=SH03_03425 NZ_CP010441.1 Protein Homology CDS 697691 699085 . - 0 ID=cds651;Parent=gene683;Dbxref=Genbank:WP_001272447.1;Name=WP_001272447.1;gbkey=CDS;product=type-1 restriction enzyme EcoKI specificity protein;protein_id=WP_001272447.1;transl_table=11 NZ_CP010441.1 RefSeq gene 699082 700671 . - . ID=gene684;Name=SH03_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03435;old_locus_tag=SH03_03430 NZ_CP010441.1 Protein Homology CDS 699082 700671 . - 0 ID=cds652;Parent=gene684;Dbxref=Genbank:WP_001063204.1;Name=WP_001063204.1;gbkey=CDS;product=type I restriction enzyme EcoKI M protein;protein_id=WP_001063204.1;transl_table=11 NZ_CP010441.1 RefSeq gene 700872 704384 . - . ID=gene685;Name=SH03_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03440;old_locus_tag=SH03_03435 NZ_CP010441.1 Protein Homology CDS 700872 704384 . - 0 ID=cds653;Parent=gene685;Dbxref=Genbank:WP_000981388.1;Name=WP_000981388.1;gbkey=CDS;product=type I restriction enzyme EcoKI R protein;protein_id=WP_000981388.1;transl_table=11 NZ_CP010441.1 RefSeq gene 704827 706032 . - . ID=gene686;Name=SH03_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03445;old_locus_tag=SH03_03440 NZ_CP010441.1 Protein Homology CDS 704827 706032 . - 0 ID=cds654;Parent=gene686;Dbxref=Genbank:WP_046377546.1;Name=WP_046377546.1;gbkey=CDS;product=MFS transporter;protein_id=WP_046377546.1;transl_table=11 NZ_CP010441.1 RefSeq gene 706114 706737 . + . ID=gene687;Name=SH03_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03450;old_locus_tag=SH03_03445 NZ_CP010441.1 Protein Homology CDS 706114 706737 . + 0 ID=cds655;Parent=gene687;Dbxref=Genbank:WP_046377547.1;Name=WP_046377547.1;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=WP_046377547.1;transl_table=11 NZ_CP010441.1 RefSeq gene 706841 707410 . + . ID=gene688;Name=SH03_RS03455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS03455;partial=true;pseudo=true;start_range=.,706841 NZ_CP010441.1 Protein Homology CDS 706841 707410 . + 0 ID=cds656;Parent=gene688;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=restriction endonuclease;pseudo=true;start_range=.,706841;transl_table=11 NZ_CP010441.1 RefSeq gene 707456 708412 . - . ID=gene689;Name=SH03_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03460;old_locus_tag=SH03_03455 NZ_CP010441.1 Protein Homology CDS 707456 708412 . - 0 ID=cds657;Parent=gene689;Dbxref=Genbank:WP_001312515.1;Name=WP_001312515.1;gbkey=CDS;product=metal-binding GTPase;protein_id=WP_001312515.1;transl_table=11 NZ_CP010441.1 RefSeq gene 708423 708626 . - . ID=gene690;Name=SH03_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03465;old_locus_tag=SH03_03460 NZ_CP010441.1 Protein Homology CDS 708423 708626 . - 0 ID=cds658;Parent=gene690;Dbxref=Genbank:WP_000467859.1;Name=WP_000467859.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000467859.1;transl_table=11 NZ_CP010441.1 RefSeq gene 708676 710826 . - . ID=gene691;Name=SH03_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03470;old_locus_tag=SH03_03465 NZ_CP010441.1 Protein Homology CDS 708676 710826 . - 0 ID=cds659;Parent=gene691;Dbxref=Genbank:WP_001299714.1;Name=WP_001299714.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001299714.1;transl_table=11 NZ_CP010441.1 RefSeq gene 710871 711044 . - . ID=gene692;Name=SH03_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03475 NZ_CP010441.1 Protein Homology CDS 710871 711044 . - 0 ID=cds660;Parent=gene692;Dbxref=Genbank:WP_042004822.1;Name=WP_042004822.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042004822.1;transl_table=11 NZ_CP010441.1 RefSeq gene 711204 712859 . + . ID=gene693;Name=SH03_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03480;old_locus_tag=SH03_03475 NZ_CP010441.1 Protein Homology CDS 711204 712859 . + 0 ID=cds661;Parent=gene693;Dbxref=Genbank:WP_000919536.1;Name=WP_000919536.1;Note=serine sensor receptor;gbkey=CDS;product=methyl-accepting chemotaxis protein I;protein_id=WP_000919536.1;transl_table=11 NZ_CP010441.1 RefSeq gene 712908 714269 . - . ID=gene694;Name=SH03_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03485;old_locus_tag=SH03_03480 NZ_CP010441.1 Protein Homology CDS 712908 714269 . - 0 ID=cds662;Parent=gene694;Dbxref=Genbank:WP_000410113.1;Name=WP_000410113.1;gbkey=CDS;product=L-galactonate transporter;protein_id=WP_000410113.1;transl_table=11 NZ_CP010441.1 RefSeq gene 714484 715398 . - . ID=gene695;Name=SH03_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03490;old_locus_tag=SH03_03485 NZ_CP010441.1 Protein Homology CDS 714484 715398 . - 0 ID=cds663;Parent=gene695;Dbxref=Genbank:WP_000091570.1;Name=WP_000091570.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000091570.1;transl_table=11 NZ_CP010441.1 RefSeq gene 715537 716559 . + . ID=gene696;Name=SH03_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03495;old_locus_tag=SH03_03490 NZ_CP010441.1 Protein Homology CDS 715537 716559 . + 0 ID=cds664;Parent=gene696;Dbxref=Genbank:WP_000106030.1;Name=WP_000106030.1;gbkey=CDS;product=L-galactonate-5-dehydrogenase;protein_id=WP_000106030.1;transl_table=11 NZ_CP010441.1 RefSeq gene 716697 718988 . - . ID=gene697;Name=SH03_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03500;old_locus_tag=SH03_03495 NZ_CP010441.1 Protein Homology CDS 716697 718988 . - 0 ID=cds665;Parent=gene697;Dbxref=Genbank:WP_001292679.1;Name=WP_001292679.1;Note=catalyzes the transfer of phosphoglycerol to the glucan backbone;gbkey=CDS;product=phosphoglycerol transferase I;protein_id=WP_001292679.1;transl_table=11 NZ_CP010441.1 RefSeq gene 719242 719733 . - . ID=gene698;Name=SH03_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03505;old_locus_tag=SH03_03500 NZ_CP010441.1 Protein Homology CDS 719242 719733 . - 0 ID=cds666;Parent=gene698;Dbxref=Genbank:WP_001297637.1;Name=WP_001297637.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001297637.1;transl_table=11 NZ_CP010441.1 RefSeq gene 719785 720522 . - . ID=gene699;Name=SH03_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03510;old_locus_tag=SH03_03505 NZ_CP010441.1 Protein Homology CDS 719785 720522 . - 0 ID=cds667;Parent=gene699;Dbxref=Genbank:WP_000799911.1;Name=WP_000799911.1;Note=acts to load the DnaB helicase onto the initiation site during DNA replication;gbkey=CDS;product=DNA replication protein DnaC;protein_id=WP_000799911.1;transl_table=11 NZ_CP010441.1 RefSeq gene 720525 721064 . - . ID=gene700;Name=SH03_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03515;old_locus_tag=SH03_03510 NZ_CP010441.1 Protein Homology CDS 720525 721064 . - 0 ID=cds668;Parent=gene700;Dbxref=Genbank:WP_000098818.1;Name=WP_000098818.1;Note=This protein is required for primosome-dependent normal DNA replication%3B it is also involved in inducing stable DNA replication during SOS response. It forms%2C in concert with dnaB protein and other prepriming proteins dnaC%2C N%2C N'%2C N'' a prepriming protein complex on the specific site of the template DNA recognized by protein N';gbkey=CDS;product=primosomal protein 1;protein_id=WP_000098818.1;transl_table=11 NZ_CP010441.1 RefSeq gene 721171 721644 . - . ID=gene701;Name=SH03_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03520;old_locus_tag=SH03_03515 NZ_CP010441.1 Protein Homology CDS 721171 721644 . - 0 ID=cds669;Parent=gene701;Dbxref=Genbank:WP_000538191.1;Name=WP_000538191.1;gbkey=CDS;product=DUF3815 domain-containing protein;protein_id=WP_000538191.1;transl_table=11 NZ_CP010441.1 RefSeq gene 721635 722405 . - . ID=gene702;Name=SH03_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03525;old_locus_tag=SH03_03520 NZ_CP010441.1 Protein Homology CDS 721635 722405 . - 0 ID=cds670;Parent=gene702;Dbxref=Genbank:WP_001338213.1;Name=WP_001338213.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001338213.1;transl_table=11 NZ_CP010441.1 RefSeq gene 723024 723749 . + . ID=gene703;Name=SH03_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03530;old_locus_tag=SH03_03525 NZ_CP010441.1 Protein Homology CDS 723024 723749 . + 0 ID=cds671;Parent=gene703;Dbxref=Genbank:WP_000936635.1;Name=WP_000936635.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000936635.1;transl_table=11 NZ_CP010441.1 RefSeq gene 723707 724384 . + . ID=gene704;Name=SH03_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03535;old_locus_tag=SH03_03530 NZ_CP010441.1 Protein Homology CDS 723707 724384 . + 0 ID=cds672;Parent=gene704;Dbxref=Genbank:WP_001301727.1;Name=WP_001301727.1;Note=regulator for the transport and utilization of the aromatic beta-glucosides arbutin and silicin;gbkey=CDS;product=transcriptional activator protein BglJ;protein_id=WP_001301727.1;transl_table=11 NZ_CP010441.1 RefSeq gene 724422 725210 . - . ID=gene705;Name=SH03_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03540;old_locus_tag=SH03_03535 NZ_CP010441.1 Protein Homology CDS 724422 725210 . - 0 ID=cds673;Parent=gene705;Dbxref=Genbank:WP_000331618.1;Name=WP_000331618.1;gbkey=CDS;product=ferric iron reductase FhuF;protein_id=WP_000331618.1;transl_table=11 NZ_CP010441.1 RefSeq gene 725312 725587 . + . ID=gene706;Name=SH03_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03545;old_locus_tag=SH03_03540 NZ_CP010441.1 Protein Homology CDS 725312 725587 . + 0 ID=cds674;Parent=gene706;Dbxref=Genbank:WP_000604532.1;Name=WP_000604532.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000604532.1;transl_table=11 NZ_CP010441.1 RefSeq gene 725626 725712 . - . ID=gene707;Name=SH03_RS03550;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS03550;old_locus_tag=SH03_03545 NZ_CP010441.1 tRNAscan-SE tRNA 725626 725712 . - . ID=rna32;Parent=gene707;anticodon=(pos:complement(725676..725678));gbkey=tRNA;product=tRNA-Leu NZ_CP010441.1 tRNAscan-SE exon 725626 725712 . - . ID=id49;Parent=rna32;anticodon=(pos:complement(725676..725678));gbkey=tRNA;product=tRNA-Leu NZ_CP010441.1 RefSeq gene 725747 725833 . - . ID=gene708;Name=SH03_RS03555;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS03555;old_locus_tag=SH03_03550 NZ_CP010441.1 tRNAscan-SE tRNA 725747 725833 . - . ID=rna33;Parent=gene708;anticodon=(pos:complement(725797..725799));gbkey=tRNA;product=tRNA-Leu NZ_CP010441.1 tRNAscan-SE exon 725747 725833 . - . ID=id50;Parent=rna33;anticodon=(pos:complement(725797..725799));gbkey=tRNA;product=tRNA-Leu NZ_CP010441.1 RefSeq gene 725862 725948 . - . ID=gene709;Name=SH03_RS03560;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS03560;old_locus_tag=SH03_03555 NZ_CP010441.1 tRNAscan-SE tRNA 725862 725948 . - . ID=rna34;Parent=gene709;anticodon=(pos:complement(725912..725914));gbkey=tRNA;product=tRNA-Leu NZ_CP010441.1 tRNAscan-SE exon 725862 725948 . - . ID=id51;Parent=rna34;anticodon=(pos:complement(725912..725914));gbkey=tRNA;product=tRNA-Leu NZ_CP010441.1 RefSeq gene 726216 727247 . - . ID=gene710;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=SH03_RS03565;old_locus_tag=SH03_03560 NZ_CP010441.1 Protein Homology CDS 726216 727247 . - 0 ID=cds675;Parent=gene710;Dbxref=Genbank:WP_001272330.1;Name=WP_001272330.1;Note=16S rRNA M2G1207 methyltransferase%3B one of many enzymes that modify bases of the ribosomal RNA%3B this enzyme methylates the G at position 1207 of the small ribosomal subunit;gbkey=CDS;gene=rsmC;product=ribosomal RNA small subunit methyltransferase C;protein_id=WP_001272330.1;transl_table=11 NZ_CP010441.1 RefSeq gene 727350 727763 . + . ID=gene711;Name=SH03_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03570;old_locus_tag=SH03_03565 NZ_CP010441.1 Protein Homology CDS 727350 727763 . + 0 ID=cds676;Parent=gene711;Dbxref=Genbank:WP_000204012.1;Name=WP_000204012.1;Note=with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB;gbkey=CDS;product=DNA polymerase III subunit psi;protein_id=WP_000204012.1;transl_table=11 NZ_CP010441.1 RefSeq gene 727732 728178 . + . ID=gene712;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=SH03_RS03575;old_locus_tag=SH03_03570 NZ_CP010441.1 Protein Homology CDS 727732 728178 . + 0 ID=cds677;Parent=gene712;Dbxref=Genbank:WP_001092461.1;Name=WP_001092461.1;Note=alanine acetyltransferase that specifically acetylates ribosomal protein S18;gbkey=CDS;gene=rimI;product=ribosomal-protein-alanine acetyltransferase;protein_id=WP_001092461.1;transl_table=11 NZ_CP010441.1 RefSeq gene 728193 728870 . + . ID=gene713;Name=SH03_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03580;old_locus_tag=SH03_03575 NZ_CP010441.1 Protein Homology CDS 728193 728870 . + 0 ID=cds678;Parent=gene713;Dbxref=Genbank:WP_000870710.1;Name=WP_000870710.1;Note=manganese-dependent 5'-nucleotidase%3B specific for 5'-UMP%2C 5'-dUMP%2C and 5'-dTMP%3B member of haloacid dehalogenase (HAD)-like hydrolase superfamily;gbkey=CDS;product=pyrimidine 5'-nucleotidase YjjG;protein_id=WP_000870710.1;transl_table=11 NZ_CP010441.1 RefSeq gene 728961 730550 . + . ID=gene714;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=SH03_RS03585;old_locus_tag=SH03_03580 NZ_CP010441.1 Protein Homology CDS 728961 730550 . + 0 ID=cds679;Parent=gene714;Dbxref=Genbank:WP_000175940.1;Name=WP_000175940.1;Note=stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein;gbkey=CDS;gene=prfC;product=peptide chain release factor 3;protein_id=WP_000175940.1;transl_table=11 NZ_CP010441.1 RefSeq gene 730943 731548 . + . ID=gene715;Name=SH03_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03590;old_locus_tag=SH03_03585 NZ_CP010441.1 Protein Homology CDS 730943 731548 . + 0 ID=cds680;Parent=gene715;Dbxref=Genbank:WP_001295748.1;Name=WP_001295748.1;gbkey=CDS;product=osmotically-inducible protein Y;protein_id=WP_001295748.1;transl_table=11 NZ_CP010441.1 RefSeq gene 731675 731836 . + . ID=gene716;Name=SH03_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03595;old_locus_tag=SH03_03590 NZ_CP010441.1 Protein Homology CDS 731675 731836 . + 0 ID=cds681;Parent=gene716;Dbxref=Genbank:WP_000490275.1;Name=WP_000490275.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000490275.1;transl_table=11 NZ_CP010441.1 RefSeq gene 731958 733031 . + . ID=gene717;Name=SH03_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03600;old_locus_tag=SH03_03595 NZ_CP010441.1 Protein Homology CDS 731958 733031 . + 0 ID=cds682;Parent=gene717;Dbxref=Genbank:WP_001299799.1;Name=WP_001299799.1;gbkey=CDS;product=patatin;protein_id=WP_001299799.1;transl_table=11 NZ_CP010441.1 RefSeq gene 733028 733807 . + . ID=gene718;Name=SH03_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03605;old_locus_tag=SH03_03600 NZ_CP010441.1 Protein Homology CDS 733028 733807 . + 0 ID=cds683;Parent=gene718;Dbxref=Genbank:WP_000563040.1;Name=WP_000563040.1;gbkey=CDS;product=DNase;protein_id=WP_000563040.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 733802 734215 . + . ID=id52;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 734227 735090 . - . ID=gene719;Name=SH03_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03610;old_locus_tag=SH03_03605 NZ_CP010441.1 Protein Homology CDS 734227 735090 . - 0 ID=cds684;Parent=gene719;Dbxref=Genbank:WP_001088415.1;Name=WP_001088415.1;gbkey=CDS;product=glycine radical enzyme activase;protein_id=WP_001088415.1;transl_table=11 NZ_CP010441.1 RefSeq gene 735062 736612 . - . ID=gene720;Name=SH03_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03615;old_locus_tag=SH03_03610 NZ_CP010441.1 Protein Homology CDS 735062 736612 . - 0 ID=cds685;Parent=gene720;Dbxref=Genbank:WP_001143253.1;Name=WP_001143253.1;gbkey=CDS;product=DUF3029 domain-containing protein;protein_id=WP_001143253.1;transl_table=11 NZ_CP010441.1 RefSeq gene 736664 736765 . + . ID=gene721;Name=SH03_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03620;old_locus_tag=SH03_03615 NZ_CP010441.1 Protein Homology CDS 736664 736765 . + 0 ID=cds686;Parent=gene721;Dbxref=Genbank:WP_000494556.1;Name=WP_000494556.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000494556.1;transl_table=11 NZ_CP010441.1 RefSeq gene 736870 737649 . + . ID=gene722;Name=SH03_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03625;old_locus_tag=SH03_03620 NZ_CP010441.1 Protein Homology CDS 736870 737649 . + 0 ID=cds687;Parent=gene722;Dbxref=Genbank:WP_001298497.1;Name=WP_001298497.1;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate;gbkey=CDS;product=deoxyribose-phosphate aldolase;protein_id=WP_001298497.1;transl_table=11 NZ_CP010441.1 RefSeq gene 737776 739098 . + . ID=gene723;Name=SH03_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03630;old_locus_tag=SH03_03625 NZ_CP010441.1 Protein Homology CDS 737776 739098 . + 0 ID=cds688;Parent=gene723;Dbxref=Genbank:WP_000477807.1;Name=WP_000477807.1;gbkey=CDS;product=thymidine phosphorylase;protein_id=WP_000477807.1;transl_table=11 NZ_CP010441.1 RefSeq gene 739150 740373 . + . ID=gene724;Name=SH03_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03635;old_locus_tag=SH03_03630 NZ_CP010441.1 Protein Homology CDS 739150 740373 . + 0 ID=cds689;Parent=gene724;Dbxref=Genbank:WP_000816471.1;Name=WP_000816471.1;gbkey=CDS;product=phosphopentomutase;protein_id=WP_000816471.1;transl_table=11 NZ_CP010441.1 RefSeq gene 740430 741149 . + . ID=gene725;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=SH03_RS03640;old_locus_tag=SH03_03635 NZ_CP010441.1 Protein Homology CDS 740430 741149 . + 0 ID=cds690;Parent=gene725;Dbxref=Genbank:WP_000224877.1;Name=WP_000224877.1;Note=catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate;gbkey=CDS;gene=deoD;product=purine nucleoside phosphorylase;protein_id=WP_000224877.1;transl_table=11 NZ_CP010441.1 RefSeq gene 741316 742647 . + . ID=gene726;Name=SH03_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03645;old_locus_tag=SH03_03640 NZ_CP010441.1 Protein Homology CDS 741316 742647 . + 0 ID=cds691;Parent=gene726;Dbxref=Genbank:WP_001293115.1;Name=WP_001293115.1;gbkey=CDS;product=kinase;protein_id=WP_001293115.1;transl_table=11 NZ_CP010441.1 RefSeq gene 742648 743664 . - . ID=gene727;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=SH03_RS03650;old_locus_tag=SH03_03645 NZ_CP010441.1 Protein Homology CDS 742648 743664 . - 0 ID=cds692;Parent=gene727;Dbxref=Genbank:WP_000105884.1;Name=WP_000105884.1;Note=Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins;gbkey=CDS;gene=lplA;product=lipoate-protein ligase A;protein_id=WP_000105884.1;transl_table=11 NZ_CP010441.1 RefSeq gene 743692 744336 . - . ID=gene728;Name=SH03_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03655;old_locus_tag=SH03_03650 NZ_CP010441.1 Protein Homology CDS 743692 744336 . - 0 ID=cds693;Parent=gene728;Dbxref=Genbank:WP_000124615.1;Name=WP_000124615.1;gbkey=CDS;product=protein Smp;protein_id=WP_000124615.1;transl_table=11 NZ_CP010441.1 RefSeq gene 744442 745410 . + . ID=gene729;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=SH03_RS03660;old_locus_tag=SH03_03655 NZ_CP010441.1 Protein Homology CDS 744442 745410 . + 0 ID=cds694;Parent=gene729;Dbxref=Genbank:WP_001132955.1;Name=WP_001132955.1;Note=catalyzes the formation of serine from O-phosphoserine;gbkey=CDS;gene=serB;product=phosphoserine phosphatase;protein_id=WP_001132955.1;transl_table=11 NZ_CP010441.1 RefSeq gene 745459 746841 . + . ID=gene730;Name=SH03_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03665;old_locus_tag=SH03_03660 NZ_CP010441.1 Protein Homology CDS 745459 746841 . + 0 ID=cds695;Parent=gene730;Dbxref=Genbank:WP_001029687.1;Name=WP_001029687.1;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;gbkey=CDS;product=DNA repair protein RadA;protein_id=WP_001029687.1;transl_table=11 NZ_CP010441.1 RefSeq gene 746862 748094 . + . ID=gene731;Name=SH03_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03670;old_locus_tag=SH03_03665 NZ_CP010441.1 Protein Homology CDS 746862 748094 . + 0 ID=cds696;Parent=gene731;Dbxref=Genbank:WP_000093814.1;Name=WP_000093814.1;Note=catalyzes the formation of NAD(+) from nicotinamide ribonucleotide%3B catalyzes the formation of nicotinamide mononucleotide from nicotinamide riboside%3B also has a regulatory function;gbkey=CDS;product=trifunctional NAD biosynthesis/regulator protein NadR;protein_id=WP_000093814.1;transl_table=11 NZ_CP010441.1 RefSeq gene 748128 748295 . + . ID=gene732;Name=SH03_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03675;old_locus_tag=SH03_03670 NZ_CP010441.1 Protein Homology CDS 748128 748295 . + 0 ID=cds697;Parent=gene732;Dbxref=Genbank:WP_000007444.1;Name=WP_000007444.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000007444.1;transl_table=11 NZ_CP010441.1 RefSeq gene 748402 750069 . - . ID=gene733;Name=SH03_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03680;old_locus_tag=SH03_03675 NZ_CP010441.1 Protein Homology CDS 748402 750069 . - 0 ID=cds698;Parent=gene733;Dbxref=Genbank:WP_000046749.1;Name=WP_000046749.1;Note=ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence;gbkey=CDS;product=energy-dependent translational throttle protein EttA;protein_id=WP_000046749.1;transl_table=11 NZ_CP010441.1 RefSeq gene 750280 752217 . + . ID=gene734;Name=SH03_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03685;old_locus_tag=SH03_03680 NZ_CP010441.1 Protein Homology CDS 750280 752217 . + 0 ID=cds699;Parent=gene734;Dbxref=Genbank:WP_000409451.1;Name=WP_000409451.1;Note=catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan;gbkey=CDS;product=murein transglycosylase;protein_id=WP_000409451.1;transl_table=11 NZ_CP010441.1 RefSeq gene 752307 752633 . + . ID=gene735;Name=SH03_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03690;old_locus_tag=SH03_03685 NZ_CP010441.1 Protein Homology CDS 752307 752633 . + 0 ID=cds700;Parent=gene735;Dbxref=Genbank:WP_000068679.1;Name=WP_000068679.1;Note=When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription;gbkey=CDS;product=Trp operon repressor;protein_id=WP_000068679.1;transl_table=11 NZ_CP010441.1 RefSeq gene 752780 753292 . - . ID=gene736;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=SH03_RS03695;old_locus_tag=SH03_03690 NZ_CP010441.1 Protein Homology CDS 752780 753292 . - 0 ID=cds701;Parent=gene736;Dbxref=Genbank:WP_001338221.1;Name=WP_001338221.1;Note=pyrophosphatase%3B has activity against dUTP and dITP%3B the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226%3B in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms%3B in Escherichia coli overexpression of this gene leads to resistance to an HMP analog;gbkey=CDS;gene=yjjX;product=non-canonical purine NTP phosphatase;protein_id=WP_001338221.1;transl_table=11 NZ_CP010441.1 RefSeq gene 753344 753991 . + . ID=gene737;Name=SH03_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03700;old_locus_tag=SH03_03695 NZ_CP010441.1 Protein Homology CDS 753344 753991 . + 0 ID=cds702;Parent=gene737;Dbxref=Genbank:WP_000942344.1;Name=WP_000942344.1;Note=catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate;gbkey=CDS;product=phosphoglycerate mutase GpmB;protein_id=WP_000942344.1;transl_table=11 NZ_CP010441.1 RefSeq gene 753988 754857 . - . ID=gene738;Name=SH03_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03705;old_locus_tag=SH03_03700 NZ_CP010441.1 Protein Homology CDS 753988 754857 . - 0 ID=cds703;Parent=gene738;Dbxref=Genbank:WP_000371666.1;Name=WP_000371666.1;Note=AraC family%3B binds to the right arm of the replication origin oriC;gbkey=CDS;product=right origin-binding protein;protein_id=WP_000371666.1;transl_table=11 NZ_CP010441.1 RefSeq gene 755068 755541 . + . ID=gene739;Name=SH03_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03710;old_locus_tag=SH03_03705 NZ_CP010441.1 Protein Homology CDS 755068 755541 . + 0 ID=cds704;Parent=gene739;Dbxref=Genbank:WP_000875487.1;Name=WP_000875487.1;gbkey=CDS;product=protein CreA;protein_id=WP_000875487.1;transl_table=11 NZ_CP010441.1 RefSeq gene 755554 756243 . + . ID=gene740;Name=SH03_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03715;old_locus_tag=SH03_03710 NZ_CP010441.1 Protein Homology CDS 755554 756243 . + 0 ID=cds705;Parent=gene740;Dbxref=Genbank:WP_001188654.1;Name=WP_001188654.1;Note=response regulator in two-component regulatory system with CreC%3B CreB protein is phosphorylated by sensor protein phospho-CreC%3B involved in catabolic regulation;gbkey=CDS;product=two-component system response regulator;protein_id=WP_001188654.1;transl_table=11 NZ_CP010441.1 RefSeq gene 756243 757667 . + . ID=gene741;Name=SH03_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03720;old_locus_tag=SH03_03715 NZ_CP010441.1 Protein Homology CDS 756243 757667 . + 0 ID=cds706;Parent=gene741;Dbxref=Genbank:WP_001219559.1;Name=WP_001219559.1;Note=part of a two-component regulatory system with CreB or PhoB%3B involved in catabolic regulation;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_001219559.1;transl_table=11 NZ_CP010441.1 RefSeq gene 757725 759077 . + . ID=gene742;Name=SH03_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03725;old_locus_tag=SH03_03720 NZ_CP010441.1 Protein Homology CDS 757725 759077 . + 0 ID=cds707;Parent=gene742;Dbxref=Genbank:WP_000920294.1;Name=WP_000920294.1;gbkey=CDS;product=protein CreD;protein_id=WP_000920294.1;transl_table=11 NZ_CP010441.1 RefSeq gene 759137 759853 . - . ID=gene743;Name=SH03_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03730;old_locus_tag=SH03_03725 NZ_CP010441.1 Protein Homology CDS 759137 759853 . - 0 ID=cds708;Parent=gene743;Dbxref=Genbank:WP_001194358.1;Name=WP_001194358.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_001194358.1;transl_table=11 NZ_CP010441.1 RefSeq gene 759949 760089 . + . ID=gene744;Name=SH03_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03735;old_locus_tag=SH03_03730 NZ_CP010441.1 Protein Homology CDS 759949 760089 . + 0 ID=cds709;Parent=gene744;Dbxref=Genbank:WP_001303782.1;Name=WP_001303782.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001303782.1;transl_table=11 NZ_CP010441.1 RefSeq gene 760489 761175 . + . ID=gene745;Name=SH03_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03740;old_locus_tag=SH03_03735 NZ_CP010441.1 Protein Homology CDS 760489 761175 . + 0 ID=cds710;Parent=gene745;Dbxref=Genbank:WP_001223132.1;Name=WP_001223132.1;Note=member of the SPOUT superfamily of methyltransferases;gbkey=CDS;product=methyltransferase;protein_id=WP_001223132.1;transl_table=11 NZ_CP010441.1 RefSeq gene 761389 761454 . + . ID=gene746;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=SH03_RS03745;old_locus_tag=SH03_03740 NZ_CP010441.1 Protein Homology CDS 761389 761454 . + 0 ID=cds711;Parent=gene746;Dbxref=Genbank:WP_001386572.1;Name=WP_001386572.1;Note=involved in threonine biosynthesis%3B controls the expression of the thrLABC operon;gbkey=CDS;gene=thrL;product=thr operon leader peptide;protein_id=WP_001386572.1;transl_table=11 NZ_CP010441.1 RefSeq gene 761536 763998 . + . ID=gene747;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=SH03_RS03750;old_locus_tag=SH03_03745 NZ_CP010441.1 Protein Homology CDS 761536 763998 . + 0 ID=cds712;Parent=gene747;Dbxref=Genbank:WP_001264707.1;Name=WP_001264707.1;Note=multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=thrA;product=bifunctional aspartokinase/homoserine dehydrogenase 1;protein_id=WP_001264707.1;transl_table=11 NZ_CP010441.1 RefSeq gene 764000 764932 . + . ID=gene748;Name=SH03_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03755;old_locus_tag=SH03_03750 NZ_CP010441.1 Protein Homology CDS 764000 764932 . + 0 ID=cds713;Parent=gene748;Dbxref=Genbank:WP_000241662.1;Name=WP_000241662.1;Note=catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate;gbkey=CDS;product=homoserine kinase;protein_id=WP_000241662.1;transl_table=11 NZ_CP010441.1 RefSeq gene 764933 766219 . + . ID=gene749;Name=SH03_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03760;old_locus_tag=SH03_03755 NZ_CP010441.1 Protein Homology CDS 764933 766219 . + 0 ID=cds714;Parent=gene749;Dbxref=Genbank:WP_000781074.1;Name=WP_000781074.1;gbkey=CDS;product=threonine synthase;protein_id=WP_000781074.1;transl_table=11 NZ_CP010441.1 RefSeq gene 766287 766436 . + . ID=gene750;Name=SH03_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03765;old_locus_tag=SH03_03760 NZ_CP010441.1 Protein Homology CDS 766287 766436 . + 0 ID=cds715;Parent=gene750;Dbxref=Genbank:WP_000414154.1;Name=WP_000414154.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000414154.1;transl_table=11 NZ_CP010441.1 RefSeq gene 766433 766729 . + . ID=gene751;Name=SH03_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03770;old_locus_tag=SH03_03765 NZ_CP010441.1 Protein Homology CDS 766433 766729 . + 0 ID=cds716;Parent=gene751;Dbxref=Genbank:WP_000738719.1;Name=WP_000738719.1;gbkey=CDS;product=DUF2502 domain-containing protein;protein_id=WP_000738719.1;transl_table=11 NZ_CP010441.1 RefSeq gene 766882 767658 . - . ID=gene752;Name=SH03_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03775;old_locus_tag=SH03_03770 NZ_CP010441.1 Protein Homology CDS 766882 767658 . - 0 ID=cds717;Parent=gene752;Dbxref=Genbank:WP_000906197.1;Name=WP_000906197.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000906197.1;transl_table=11 NZ_CP010441.1 RefSeq gene 767728 769158 . - . ID=gene753;Name=SH03_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03780;old_locus_tag=SH03_03775 NZ_CP010441.1 Protein Homology CDS 767728 769158 . - 0 ID=cds718;Parent=gene753;Dbxref=Genbank:WP_001112606.1;Name=WP_001112606.1;gbkey=CDS;product=transporter;protein_id=WP_001112606.1;transl_table=11 NZ_CP010441.1 RefSeq gene 769437 770390 . + . ID=gene754;Name=SH03_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03785;old_locus_tag=SH03_03780 NZ_CP010441.1 Protein Homology CDS 769437 770390 . + 0 ID=cds719;Parent=gene754;Dbxref=Genbank:WP_000130185.1;Name=WP_000130185.1;gbkey=CDS;product=transaldolase 1;protein_id=WP_000130185.1;transl_table=11 NZ_CP010441.1 RefSeq gene 770505 771092 . + . ID=gene755;Name=mogA;gbkey=Gene;gene=mogA;gene_biotype=protein_coding;locus_tag=SH03_RS03790;old_locus_tag=SH03_03785 NZ_CP010441.1 Protein Homology CDS 770505 771092 . + 0 ID=cds720;Parent=gene755;Dbxref=Genbank:WP_001295414.1;Name=WP_001295414.1;Note=forms a trimer%3B related to eukaryotic protein gephyrin%3B functions during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mogA;product=molybdopterin adenylyltransferase;protein_id=WP_001295414.1;transl_table=11 NZ_CP010441.1 RefSeq gene 771127 771693 . - . ID=gene756;Name=SH03_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03795;old_locus_tag=SH03_03790 NZ_CP010441.1 Protein Homology CDS 771127 771693 . - 0 ID=cds721;Parent=gene756;Dbxref=Genbank:WP_000528538.1;Name=WP_000528538.1;gbkey=CDS;product=succinate-acetate/proton symporter SatP;protein_id=WP_000528538.1;transl_table=11 NZ_CP010441.1 RefSeq gene 771842 772555 . - . ID=gene757;Name=SH03_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03800;old_locus_tag=SH03_03795 NZ_CP010441.1 Protein Homology CDS 771842 772555 . - 0 ID=cds722;Parent=gene757;Dbxref=Genbank:WP_001102367.1;Name=WP_001102367.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001102367.1;transl_table=11 NZ_CP010441.1 RefSeq gene 772581 772985 . - . ID=gene758;Name=SH03_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03805;old_locus_tag=SH03_03800 NZ_CP010441.1 Protein Homology CDS 772581 772985 . - 0 ID=cds723;Parent=gene758;Dbxref=Genbank:WP_000843565.1;Name=WP_000843565.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000843565.1;transl_table=11 NZ_CP010441.1 RefSeq gene 773362 775278 . + . ID=gene759;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=SH03_RS03810;old_locus_tag=SH03_03805 NZ_CP010441.1 Protein Homology CDS 773362 775278 . + 0 ID=cds724;Parent=gene759;Dbxref=Genbank:WP_000516135.1;Name=WP_000516135.1;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;gbkey=CDS;gene=dnaK;product=molecular chaperone DnaK;protein_id=WP_000516135.1;transl_table=11 NZ_CP010441.1 RefSeq gene 775367 776497 . + . ID=gene760;Name=SH03_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03815;old_locus_tag=SH03_03810 NZ_CP010441.1 Protein Homology CDS 775367 776497 . + 0 ID=cds725;Parent=gene760;Dbxref=Genbank:WP_001118476.1;Name=WP_001118476.1;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;gbkey=CDS;product=molecular chaperone DnaJ;protein_id=WP_001118476.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 776586 777931 . + . ID=id53;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 776644 777756 . + . ID=gene761;Name=SH03_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03820;old_locus_tag=SH03_03815 NZ_CP010441.1 Protein Homology CDS 776644 777756 . + 0 ID=cds726;Parent=gene761;Dbxref=Genbank:WP_001300563.1;Name=WP_001300563.1;gbkey=CDS;product=transposase;protein_id=WP_001300563.1;transl_table=11 NZ_CP010441.1 RefSeq gene 777950 778102 . - . ID=gene762;Name=SH03_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03825;old_locus_tag=SH03_03820 NZ_CP010441.1 Protein Homology CDS 777950 778102 . - 0 ID=cds727;Parent=gene762;Dbxref=Genbank:WP_000809168.1;Name=WP_000809168.1;gbkey=CDS;product=protein HokC;protein_id=WP_000809168.1;transl_table=11 NZ_CP010441.1 RefSeq gene 778688 779854 . + . ID=gene763;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=SH03_RS03830;old_locus_tag=SH03_03825 NZ_CP010441.1 Protein Homology CDS 778688 779854 . + 0 ID=cds728;Parent=gene763;Dbxref=Genbank:WP_000681354.1;Name=WP_000681354.1;Note=exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH;gbkey=CDS;gene=nhaA;product=Na+/H+ antiporter NhaA;protein_id=WP_000681354.1;transl_table=11 NZ_CP010441.1 RefSeq gene 779920 780819 . + . ID=gene764;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=SH03_RS03835;old_locus_tag=SH03_03830 NZ_CP010441.1 Protein Homology CDS 779920 780819 . + 0 ID=cds729;Parent=gene764;Dbxref=Genbank:WP_001338226.1;Name=WP_001338226.1;Note=Na+/H+ antiporter regulatory protein%3B activates the genes nhaA and osmC;gbkey=CDS;gene=nhaR;product=transcriptional regulator;protein_id=WP_001338226.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 780995 781763 . + . ID=id54;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 781010 781513 . - . ID=gene765;Name=SH03_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03840;old_locus_tag=SH03_03835 NZ_CP010441.1 Protein Homology CDS 781010 781513 . - 0 ID=cds730;Parent=gene765;Dbxref=Genbank:WP_001119362.1;Name=WP_001119362.1;gbkey=CDS;product=transposase;protein_id=WP_001119362.1;transl_table=11 NZ_CP010441.1 RefSeq gene 782014 782277 . - . ID=gene766;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=SH03_RS03845;old_locus_tag=SH03_03840 NZ_CP010441.1 Protein Homology CDS 782014 782277 . - 0 ID=cds731;Parent=gene766;Dbxref=Genbank:WP_001274021.1;Name=WP_001274021.1;Note=binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase;gbkey=CDS;gene=rpsT;product=30S ribosomal protein S20;protein_id=WP_001274021.1;transl_table=11 NZ_CP010441.1 RefSeq gene 782380 782598 . + . ID=gene767;Name=SH03_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03850;old_locus_tag=SH03_03845 NZ_CP010441.1 Protein Homology CDS 782380 782598 . + 0 ID=cds732;Parent=gene767;Dbxref=Genbank:WP_001300728.1;Name=WP_001300728.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001300728.1;transl_table=11 NZ_CP010441.1 RefSeq gene 782606 783547 . + . ID=gene768;Name=SH03_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03855;old_locus_tag=SH03_03850 NZ_CP010441.1 Protein Homology CDS 782606 783547 . + 0 ID=cds733;Parent=gene768;Dbxref=Genbank:WP_000767329.1;Name=WP_000767329.1;gbkey=CDS;product=bifunctional riboflavin kinase/FMN adenylyltransferase;protein_id=WP_000767329.1;transl_table=11 NZ_CP010441.1 RefSeq gene 783590 786406 . + . ID=gene769;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=SH03_RS03860;old_locus_tag=SH03_03855 NZ_CP010441.1 Protein Homology CDS 783590 786406 . + 0 ID=cds734;Parent=gene769;Dbxref=Genbank:WP_001286857.1;Name=WP_001286857.1;Note=IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme;gbkey=CDS;gene=ileS;product=isoleucine--tRNA ligase;protein_id=WP_001286857.1;transl_table=11 NZ_CP010441.1 RefSeq gene 786406 786900 . + . ID=gene770;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=SH03_RS03865;old_locus_tag=SH03_03860 NZ_CP010441.1 Protein Homology CDS 786406 786900 . + 0 ID=cds735;Parent=gene770;Dbxref=Genbank:WP_000083372.1;Name=WP_000083372.1;Note=lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis;gbkey=CDS;gene=lspA;product=lipoprotein signal peptidase;protein_id=WP_000083372.1;transl_table=11 NZ_CP010441.1 RefSeq gene 787025 787474 . + . ID=gene771;Name=SH03_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03870;old_locus_tag=SH03_03865 NZ_CP010441.1 Protein Homology CDS 787025 787474 . + 0 ID=cds736;Parent=gene771;Dbxref=Genbank:WP_000004655.1;Name=WP_000004655.1;Note=rotamase%3B accelerates isomerization of the peptidyl prolyl bond%2C involved in the folding of proteases;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_000004655.1;transl_table=11 NZ_CP010441.1 RefSeq gene 787476 788426 . + . ID=gene772;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=SH03_RS03875;old_locus_tag=SH03_03870 NZ_CP010441.1 Protein Homology CDS 787476 788426 . + 0 ID=cds737;Parent=gene772;Dbxref=Genbank:WP_001166395.1;Name=WP_001166395.1;Note=catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway;gbkey=CDS;gene=ispH;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166395.1;transl_table=11 NZ_CP010441.1 RefSeq gene 788492 789406 . + . ID=gene773;Name=SH03_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03880;old_locus_tag=SH03_03875 NZ_CP010441.1 Protein Homology CDS 788492 789406 . + 0 ID=cds738;Parent=gene773;Dbxref=Genbank:WP_001239142.1;Name=WP_001239142.1;Note=catalyzes the hydrolysis of both purine and pyrimidine ribonucleosides;gbkey=CDS;product=non-specific ribonucleoside hydrolase RihC;protein_id=WP_001239142.1;transl_table=11 NZ_CP010441.1 RefSeq gene 789573 790394 . + . ID=gene774;Name=SH03_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03885;old_locus_tag=SH03_03880 NZ_CP010441.1 Protein Homology CDS 789573 790394 . + 0 ID=cds739;Parent=gene774;Dbxref=Genbank:WP_000543604.1;Name=WP_000543604.1;Note=catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis;gbkey=CDS;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_000543604.1;transl_table=11 NZ_CP010441.1 RefSeq gene 790436 790603 . - . ID=gene775;Name=SH03_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03890;old_locus_tag=SH03_03885 NZ_CP010441.1 Protein Homology CDS 790436 790603 . - 0 ID=cds740;Parent=gene775;Dbxref=Genbank:WP_000544444.1;Name=WP_000544444.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000544444.1;transl_table=11 NZ_CP010441.1 RefSeq gene 790637 790732 . - . ID=gene776;Name=SH03_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03895;old_locus_tag=SH03_03890 NZ_CP010441.1 Protein Homology CDS 790637 790732 . - 0 ID=cds741;Parent=gene776;Dbxref=Genbank:WP_000501020.1;Name=WP_000501020.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000501020.1;transl_table=11 NZ_CP010441.1 RefSeq gene 790850 791998 . + . ID=gene777;Name=SH03_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03900;old_locus_tag=SH03_03895 NZ_CP010441.1 Protein Homology CDS 790850 791998 . + 0 ID=cds742;Parent=gene777;Dbxref=Genbank:WP_000597260.1;Name=WP_000597260.1;Note=catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers;gbkey=CDS;product=carbamoyl-phosphate synthase small chain;protein_id=WP_000597260.1;transl_table=11 NZ_CP010441.1 RefSeq gene 792016 795237 . + . ID=gene778;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=SH03_RS03905;old_locus_tag=SH03_03900 NZ_CP010441.1 Protein Homology CDS 792016 795237 . + 0 ID=cds743;Parent=gene778;Dbxref=Genbank:WP_001126348.1;Name=WP_001126348.1;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;gbkey=CDS;gene=carB;product=carbamoyl-phosphate synthase large chain;protein_id=WP_001126348.1;transl_table=11 NZ_CP010441.1 RefSeq gene 795285 795464 . - . ID=gene779;Name=SH03_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03910;old_locus_tag=SH03_03905 NZ_CP010441.1 Protein Homology CDS 795285 795464 . - 0 ID=cds744;Parent=gene779;Dbxref=Genbank:WP_000196533.1;Name=WP_000196533.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000196533.1;transl_table=11 NZ_CP010441.1 RefSeq gene 795499 795894 . + . ID=gene780;Name=SH03_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03915;old_locus_tag=SH03_03910 NZ_CP010441.1 Protein Homology CDS 795499 795894 . + 0 ID=cds745;Parent=gene780;Dbxref=Genbank:WP_000333125.1;Name=WP_000333125.1;Note=regulator of carnitine metabolism%3B induces the caiTABCDE and fixABCX operons;gbkey=CDS;product=transcriptional activatory protein CaiF;protein_id=WP_000333125.1;transl_table=11 NZ_CP010441.1 RefSeq gene 795980 796570 . - . ID=gene781;Name=SH03_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03920;old_locus_tag=SH03_03915 NZ_CP010441.1 Protein Homology CDS 795980 796570 . - 0 ID=cds746;Parent=gene781;Dbxref=Genbank:WP_000122871.1;Name=WP_000122871.1;Note=involved in the synthesis of a cofactor required for carnitine dehydratase and carnitine racemase activities;gbkey=CDS;product=carnitine operon protein CaiE;protein_id=WP_000122871.1;transl_table=11 NZ_CP010441.1 RefSeq gene 796576 797361 . - . ID=gene782;Name=SH03_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03925;old_locus_tag=SH03_03920 NZ_CP010441.1 Protein Homology CDS 796576 797361 . - 0 ID=cds747;Parent=gene782;Dbxref=Genbank:WP_001295419.1;Name=WP_001295419.1;Note=catalyzes the dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA;gbkey=CDS;product=carnitinyl-CoA dehydratase;protein_id=WP_001295419.1;transl_table=11 NZ_CP010441.1 RefSeq gene 797470 799023 . - . ID=gene783;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=SH03_RS03930;old_locus_tag=SH03_03925 NZ_CP010441.1 Protein Homology CDS 797470 799023 . - 0 ID=cds748;Parent=gene783;Dbxref=Genbank:WP_001350478.1;Name=WP_001350478.1;gbkey=CDS;gene=caiC;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_001350478.1;transl_table=11 NZ_CP010441.1 RefSeq gene 799097 800314 . - . ID=gene784;Name=SH03_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03935;old_locus_tag=SH03_03930 NZ_CP010441.1 Protein Homology CDS 799097 800314 . - 0 ID=cds749;Parent=gene784;Dbxref=Genbank:WP_000349936.1;Name=WP_000349936.1;Note=catalyzes formation of L-carnitinyl-CoA by transfering the CoA moiety from gamma-butyrobetainyl-CoA%2C also catalyzes the formation of crotonobetainyl-CoA by transfer of CoA from gamma-butyrobetainyl-CoA or L-carnitinyl-CoA to crotonobetaine;gbkey=CDS;product=L-carnitine CoA-transferase;protein_id=WP_000349936.1;transl_table=11 NZ_CP010441.1 RefSeq gene 800443 801585 . - . ID=gene785;Name=SH03_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03940;old_locus_tag=SH03_03935 NZ_CP010441.1 Protein Homology CDS 800443 801585 . - 0 ID=cds750;Parent=gene785;Dbxref=Genbank:WP_000347117.1;Name=WP_000347117.1;Note=catalyzes the reduction of crotonobetainyl-CoA to gamma-butyrobetainyl-CoA;gbkey=CDS;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_000347117.1;transl_table=11 NZ_CP010441.1 RefSeq gene 801616 803130 . - . ID=gene786;Name=SH03_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03945;old_locus_tag=SH03_03940 NZ_CP010441.1 Protein Homology CDS 801616 803130 . - 0 ID=cds751;Parent=gene786;Dbxref=Genbank:WP_000787103.1;Name=WP_000787103.1;Note=catalyzes the exchange of L-carnitine for gamma-butyrobetaine in carnitine metabolism;gbkey=CDS;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WP_000787103.1;transl_table=11 NZ_CP010441.1 RefSeq gene 803602 804372 . + . ID=gene787;Name=SH03_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03950;old_locus_tag=SH03_03945 NZ_CP010441.1 Protein Homology CDS 803602 804372 . + 0 ID=cds752;Parent=gene787;Dbxref=Genbank:WP_000692204.1;Name=WP_000692204.1;Note=required for anaerobic carnitine reduction%2C may act to transfer electrons to crotonobetaine reductase;gbkey=CDS;product=protein FixA;protein_id=WP_000692204.1;transl_table=11 NZ_CP010441.1 RefSeq gene 804387 805328 . + . ID=gene788;Name=SH03_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03955;old_locus_tag=SH03_03950 NZ_CP010441.1 Protein Homology CDS 804387 805328 . + 0 ID=cds753;Parent=gene788;Dbxref=Genbank:WP_001091499.1;Name=WP_001091499.1;gbkey=CDS;product=protein FixB;protein_id=WP_001091499.1;transl_table=11 NZ_CP010441.1 RefSeq gene 805379 806665 . + . ID=gene789;Name=SH03_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03960;old_locus_tag=SH03_03955 NZ_CP010441.1 Protein Homology CDS 805379 806665 . + 0 ID=cds754;Parent=gene789;Dbxref=Genbank:WP_001287715.1;Name=WP_001287715.1;Note=FAD/NAD(P)-binding domain%3B possibly part of an electron transfer system required for anaerobic carnitine reduction;gbkey=CDS;product=protein FixC;protein_id=WP_001287715.1;transl_table=11 NZ_CP010441.1 RefSeq gene 806662 806949 . + . ID=gene790;Name=SH03_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03965;old_locus_tag=SH03_03960 NZ_CP010441.1 Protein Homology CDS 806662 806949 . + 0 ID=cds755;Parent=gene790;Dbxref=Genbank:WP_000203741.1;Name=WP_000203741.1;gbkey=CDS;product=ferredoxin-like protein FixX;protein_id=WP_000203741.1;transl_table=11 NZ_CP010441.1 RefSeq gene 807006 808337 . + . ID=gene791;Name=SH03_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03970;old_locus_tag=SH03_03965 NZ_CP010441.1 Protein Homology CDS 807006 808337 . + 0 ID=cds756;Parent=gene791;Dbxref=Genbank:WP_001183198.1;Name=WP_001183198.1;gbkey=CDS;product=transporter;protein_id=WP_001183198.1;transl_table=11 NZ_CP010441.1 RefSeq gene 808445 808975 . + . ID=gene792;Name=SH03_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03975;old_locus_tag=SH03_03970 NZ_CP010441.1 Protein Homology CDS 808445 808975 . + 0 ID=cds757;Parent=gene792;Dbxref=Genbank:WP_000600725.1;Name=WP_000600725.1;Note=Required for full activity of KefC%2C a potassium-proton antiporter;gbkey=CDS;product=glutathione-regulated potassium-efflux system ancillary protein KefF;protein_id=WP_000600725.1;transl_table=11 NZ_CP010441.1 RefSeq gene 808968 810830 . + . ID=gene793;Name=SH03_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS03980;old_locus_tag=SH03_03975 NZ_CP010441.1 Protein Homology CDS 808968 810830 . + 0 ID=cds758;Parent=gene793;Dbxref=Genbank:WP_000377098.1;Name=WP_000377098.1;Note=transport system that facilitates potassium-efflux;gbkey=CDS;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_000377098.1;transl_table=11 NZ_CP010441.1 RefSeq gene 811022 811501 . + . ID=gene794;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=SH03_RS03985;old_locus_tag=SH03_03980 NZ_CP010441.1 Protein Homology CDS 811022 811501 . + 0 ID=cds759;Parent=gene794;Dbxref=Genbank:WP_000624375.1;Name=WP_000624375.1;Note=catalyzes the reduction of dihydrofolate to tetrahydrofolate;gbkey=CDS;gene=folA;product=dihydrofolate reductase;protein_id=WP_000624375.1;transl_table=11 NZ_CP010441.1 RefSeq gene 811579 812421 . - . ID=gene795;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=SH03_RS03990;old_locus_tag=SH03_03985 NZ_CP010441.1 Protein Homology CDS 811579 812421 . - 0 ID=cds760;Parent=gene795;Dbxref=Genbank:WP_000257192.1;Name=WP_000257192.1;Note=hydrolyzes P(1)%2CP(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP;gbkey=CDS;gene=apaH;product=diadenosine tetraphosphatase;protein_id=WP_000257192.1;transl_table=11 NZ_CP010441.1 RefSeq gene 812428 812805 . - . ID=gene796;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=SH03_RS03995;old_locus_tag=SH03_03990 NZ_CP010441.1 Protein Homology CDS 812428 812805 . - 0 ID=cds761;Parent=gene796;Dbxref=Genbank:WP_000610901.1;Name=WP_000610901.1;Note=protein associated with Co2+ and Mg2+ efflux;gbkey=CDS;gene=apaG;product=protein ApaG;protein_id=WP_000610901.1;transl_table=11 NZ_CP010441.1 RefSeq gene 812808 813629 . - . ID=gene797;Name=ksgA;gbkey=Gene;gene=ksgA;gene_biotype=protein_coding;locus_tag=SH03_RS04000;old_locus_tag=SH03_03995 NZ_CP010441.1 Protein Homology CDS 812808 813629 . - 0 ID=cds762;Parent=gene797;Dbxref=Genbank:WP_001065381.1;Name=WP_001065381.1;Note=in Escherichia coli this enzyme catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin%3B members of this protein family have secondary functions;gbkey=CDS;gene=ksgA;product=ribosomal RNA small subunit methyltransferase A;protein_id=WP_001065381.1;transl_table=11 NZ_CP010441.1 RefSeq gene 813626 814615 . - . ID=gene798;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=SH03_RS04005;old_locus_tag=SH03_04000 NZ_CP010441.1 Protein Homology CDS 813626 814615 . - 0 ID=cds763;Parent=gene798;Dbxref=Genbank:WP_000241277.1;Name=WP_000241277.1;Note=catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate);gbkey=CDS;gene=pdxA;product=4-hydroxythreonine-4-phosphate dehydrogenase;protein_id=WP_000241277.1;transl_table=11 NZ_CP010441.1 RefSeq gene 814615 815901 . - . ID=gene799;Name=SH03_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04010;old_locus_tag=SH03_04005 NZ_CP010441.1 Protein Homology CDS 814615 815901 . - 0 ID=cds764;Parent=gene799;Dbxref=Genbank:WP_000800457.1;Name=WP_000800457.1;Note=Chaperone involved in the folding of extracytoplasmic proteins%2C especially OmpA%2C OmpF and LamB;gbkey=CDS;product=chaperone SurA;protein_id=WP_000800457.1;transl_table=11 NZ_CP010441.1 RefSeq gene 815954 818308 . - . ID=gene800;Name=SH03_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04015;old_locus_tag=SH03_04010 NZ_CP010441.1 Protein Homology CDS 815954 818308 . - 0 ID=cds765;Parent=gene800;Dbxref=Genbank:WP_000746151.1;Name=WP_000746151.1;Note=is involved in outer membrane permeability;gbkey=CDS;product=LPS-assembly protein LptD;protein_id=WP_000746151.1;transl_table=11 NZ_CP010441.1 RefSeq gene 818563 819378 . + . ID=gene801;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=SH03_RS04020;old_locus_tag=SH03_04015 NZ_CP010441.1 Protein Homology CDS 818563 819378 . + 0 ID=cds766;Parent=gene801;Dbxref=Genbank:WP_001200579.1;Name=WP_001200579.1;Note=functions as a co-chaperone with DnaK%3B involved in regulation of colanic acid capsule%3B inner membrane protein%3B dimerized via transmembrane domain%3B J-like domain is cytoplasmic and can functionally substitute for DnaJ%3B stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system;gbkey=CDS;gene=djlA;product=dnaJ-like protein DjlA;protein_id=WP_001200579.1;transl_table=11 NZ_CP010441.1 RefSeq gene 819673 820478 . + . ID=gene802;Name=SH03_RS04025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS04025;pseudo=true NZ_CP010441.1 Protein Homology CDS 819673 820478 . + 0 ID=cds767;Parent=gene802;exception=annotated by transcript or proteomic data;gbkey=CDS;product=UDP pyrophosphate phosphatase;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 820886 821545 . - . ID=gene803;Name=SH03_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04030;old_locus_tag=SH03_04025 NZ_CP010441.1 Protein Homology CDS 820886 821545 . - 0 ID=cds768;Parent=gene803;Dbxref=Genbank:WP_000525176.1;Name=WP_000525176.1;Note=catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase A;protein_id=WP_000525176.1;transl_table=11 NZ_CP010441.1 RefSeq gene 821557 824463 . - . ID=gene804;Name=SH03_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04035;old_locus_tag=SH03_04030 NZ_CP010441.1 Protein Homology CDS 821557 824463 . - 0 ID=cds769;Parent=gene804;Dbxref=Genbank:WP_001117011.1;Name=WP_001117011.1;Note=transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP%2C when it is trapped or immobilized on tightly supercoiled DNA;gbkey=CDS;product=RNA polymerase-associated protein RapA;protein_id=WP_001117011.1;transl_table=11 NZ_CP010441.1 RefSeq gene 824628 826979 . - . ID=gene805;Name=SH03_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04040;old_locus_tag=SH03_04035 NZ_CP010441.1 Protein Homology CDS 824628 826979 . - 0 ID=cds770;Parent=gene805;Dbxref=Genbank:WP_000035670.1;Name=WP_000035670.1;Note=Has polymerase%2C DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C;gbkey=CDS;product=DNA polymerase II;protein_id=WP_000035670.1;transl_table=11 NZ_CP010441.1 RefSeq gene 827054 827749 . - . ID=gene806;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=SH03_RS04045;old_locus_tag=SH03_04040 NZ_CP010441.1 Protein Homology CDS 827054 827749 . - 0 ID=cds771;Parent=gene806;Dbxref=Genbank:WP_000888666.1;Name=WP_000888666.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000888666.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 827763 828014 . + . ID=id55;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 828034 829536 . - . ID=gene807;Name=SH03_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04050;old_locus_tag=SH03_04045 NZ_CP010441.1 Protein Homology CDS 828034 829536 . - 0 ID=cds772;Parent=gene807;Dbxref=Genbank:WP_000151748.1;Name=WP_000151748.1;Note=catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism;gbkey=CDS;product=L-arabinose isomerase;protein_id=WP_000151748.1;transl_table=11 NZ_CP010441.1 RefSeq gene 829547 831247 . - . ID=gene808;Name=SH03_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04055;old_locus_tag=SH03_04050 NZ_CP010441.1 Protein Homology CDS 829547 831247 . - 0 ID=cds773;Parent=gene808;Dbxref=Genbank:WP_000951856.1;Name=WP_000951856.1;Note=catalyzes the phosphorylation of ribulose to ribulose 5-phosphate;gbkey=CDS;product=ribulokinase;protein_id=WP_000951856.1;transl_table=11 NZ_CP010441.1 RefSeq gene 831586 832464 . + . ID=gene809;Name=SH03_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04060;old_locus_tag=SH03_04055 NZ_CP010441.1 Protein Homology CDS 831586 832464 . + 0 ID=cds774;Parent=gene809;Dbxref=Genbank:WP_001300811.1;Name=WP_001300811.1;Note=positive and negative regulator%3B regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose;gbkey=CDS;product=arabinose operon regulatory protein;protein_id=WP_001300811.1;transl_table=11 NZ_CP010441.1 RefSeq gene 832550 833314 . + . ID=gene810;Name=SH03_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04065;old_locus_tag=SH03_04060 NZ_CP010441.1 Protein Homology CDS 832550 833314 . + 0 ID=cds775;Parent=gene810;Dbxref=Genbank:WP_001148390.1;Name=WP_001148390.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001148390.1;transl_table=11 NZ_CP010441.1 RefSeq gene 833428 834126 . - . ID=gene811;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=SH03_RS04070;old_locus_tag=SH03_04065 NZ_CP010441.1 Protein Homology CDS 833428 834126 . - 0 ID=cds776;Parent=gene811;Dbxref=Genbank:WP_000916281.1;Name=WP_000916281.1;Note=with TbpA and ThiP is part of the thiamine and TPP transport system;gbkey=CDS;gene=thiQ;product=thiamine import ATP-binding protein ThiQ;protein_id=WP_000916281.1;transl_table=11 NZ_CP010441.1 RefSeq gene 834110 835720 . - . ID=gene812;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;gene_synonym=sfuB;locus_tag=SH03_RS04075;old_locus_tag=SH03_04070 NZ_CP010441.1 Protein Homology CDS 834110 835720 . - 0 ID=cds777;Parent=gene812;Dbxref=Genbank:WP_000235721.1;Name=WP_000235721.1;Note=permease%3B with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell%3B repressed in presence of exogenous thiamine;gbkey=CDS;gene=thiP;product=thiamine ABC transporter permease;protein_id=WP_000235721.1;transl_table=11 NZ_CP010441.1 RefSeq gene 835696 836679 . - . ID=gene813;Name=tbpA;gbkey=Gene;gene=tbpA;gene_biotype=protein_coding;locus_tag=SH03_RS04080;old_locus_tag=SH03_04075 NZ_CP010441.1 Protein Homology CDS 835696 836679 . - 0 ID=cds778;Parent=gene813;Dbxref=Genbank:WP_001301364.1;Name=WP_001301364.1;Note=part of the thiamine and TPP transport system tbpA-thiPQ;gbkey=CDS;gene=tbpA;product=thiamine-binding periplasmic protein;protein_id=WP_001301364.1;transl_table=11 NZ_CP010441.1 RefSeq gene 836843 838498 . - . ID=gene814;Name=SH03_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04085;old_locus_tag=SH03_04080 NZ_CP010441.1 Protein Homology CDS 836843 838498 . - 0 ID=cds779;Parent=gene814;Dbxref=Genbank:WP_001138624.1;Name=WP_001138624.1;Note=activates sgrS under glucose-phosphate stress conditions;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001138624.1;transl_table=11 NZ_CP010441.1 RefSeq gene 838587 838718 . + . ID=gene815;Name=SH03_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04090;old_locus_tag=SH03_04085 NZ_CP010441.1 Protein Homology CDS 838587 838718 . + 0 ID=cds780;Parent=gene815;Dbxref=Genbank:WP_001248770.1;Name=WP_001248770.1;gbkey=CDS;product=inhibitor of glucose uptake;protein_id=WP_001248770.1;transl_table=11 NZ_CP010441.1 RefSeq gene 838820 839998 . + . ID=gene816;Name=SH03_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04095;old_locus_tag=SH03_04090 NZ_CP010441.1 Protein Homology CDS 838820 839998 . + 0 ID=cds781;Parent=gene816;Dbxref=Genbank:WP_000637847.1;Name=WP_000637847.1;gbkey=CDS;product=sugar efflux transporter A;protein_id=WP_000637847.1;transl_table=11 NZ_CP010441.1 RefSeq gene 840047 840652 . - . ID=gene817;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=SH03_RS04100;old_locus_tag=SH03_04095 NZ_CP010441.1 Protein Homology CDS 840047 840652 . - 0 ID=cds782;Parent=gene817;Dbxref=Genbank:WP_000818228.1;Name=WP_000818228.1;Note=catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC/D;gbkey=CDS;gene=leuD;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000818228.1;transl_table=11 NZ_CP010441.1 RefSeq gene 840663 842063 . - . ID=gene818;Name=SH03_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04105;old_locus_tag=SH03_04100 NZ_CP010441.1 Protein Homology CDS 840663 842063 . - 0 ID=cds783;Parent=gene818;Dbxref=Genbank:WP_001140652.1;Name=WP_001140652.1;Note=dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate;gbkey=CDS;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001140652.1;transl_table=11 NZ_CP010441.1 RefSeq gene 842066 843157 . - . ID=gene819;Name=SH03_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04110;old_locus_tag=SH03_04105 NZ_CP010441.1 Protein Homology CDS 842066 843157 . - 0 ID=cds784;Parent=gene819;Dbxref=Genbank:WP_000042353.1;Name=WP_000042353.1;gbkey=CDS;product=3-isopropylmalate dehydrogenase;protein_id=WP_000042353.1;transl_table=11 NZ_CP010441.1 RefSeq gene 843157 844728 . - . ID=gene820;Name=SH03_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04115;old_locus_tag=SH03_04110 NZ_CP010441.1 Protein Homology CDS 843157 844728 . - 0 ID=cds785;Parent=gene820;Dbxref=Genbank:WP_000082850.1;Name=WP_000082850.1;gbkey=CDS;product=2-isopropylmalate synthase;protein_id=WP_000082850.1;transl_table=11 NZ_CP010441.1 RefSeq gene 844821 844907 . - . ID=gene821;Name=SH03_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04120;old_locus_tag=SH03_04115 NZ_CP010441.1 Protein Homology CDS 844821 844907 . - 0 ID=cds786;Parent=gene821;Dbxref=Genbank:WP_001300467.1;Name=WP_001300467.1;Note=involved in attenuation control of the leuABCD operon in leucine biosynthesis;gbkey=CDS;product=leu operon leader peptide;protein_id=WP_001300467.1;transl_table=11 NZ_CP010441.1 RefSeq gene 845567 846511 . + . ID=gene822;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=SH03_RS04125;old_locus_tag=SH03_04120 NZ_CP010441.1 Protein Homology CDS 845567 846511 . + 0 ID=cds787;Parent=gene822;Dbxref=Genbank:WP_001115472.1;Name=WP_001115472.1;Note=activator for leuABCD operon%3B member of LysR family of transcriptional activators;gbkey=CDS;gene=leuO;product=transcriptional regulator;protein_id=WP_001115472.1;transl_table=11 NZ_CP010441.1 RefSeq gene 846829 848553 . + . ID=gene823;Name=SH03_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04130;old_locus_tag=SH03_04125 NZ_CP010441.1 Protein Homology CDS 846829 848553 . + 0 ID=cds788;Parent=gene823;Dbxref=Genbank:WP_001295534.1;Name=WP_001295534.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive;gbkey=CDS;product=acetolactate synthase isozyme 3 large subunit;protein_id=WP_001295534.1;transl_table=11 NZ_CP010441.1 RefSeq gene 848556 849047 . + . ID=gene824;Name=ilvH;gbkey=Gene;gene=ilvH;gene_biotype=protein_coding;locus_tag=SH03_RS04135;old_locus_tag=SH03_04130 NZ_CP010441.1 Protein Homology CDS 848556 849047 . + 0 ID=cds789;Parent=gene824;Dbxref=Genbank:WP_001300383.1;Name=WP_001300383.1;Note=with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit;gbkey=CDS;gene=ilvH;product=acetolactate synthase isozyme 3 small subunit;protein_id=WP_001300383.1;transl_table=11 NZ_CP010441.1 RefSeq gene 849059 849145 . + . ID=gene825;Name=SH03_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04140;old_locus_tag=SH03_04135 NZ_CP010441.1 Protein Homology CDS 849059 849145 . + 0 ID=cds790;Parent=gene825;Dbxref=Genbank:WP_001303787.1;Name=WP_001303787.1;gbkey=CDS;product=fruR/shl operon leader peptide;protein_id=WP_001303787.1;transl_table=11 NZ_CP010441.1 RefSeq gene 849227 850231 . + . ID=gene826;Name=SH03_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04145;old_locus_tag=SH03_04140 NZ_CP010441.1 Protein Homology CDS 849227 850231 . + 0 ID=cds791;Parent=gene826;Dbxref=Genbank:WP_000762401.1;Name=WP_000762401.1;Note=binds D-fructose as an inducer%3B involved in regulation of operons for central pathways of carbon metabolism;gbkey=CDS;product=catabolite repressor/activator;protein_id=WP_000762401.1;transl_table=11 NZ_CP010441.1 RefSeq gene 850833 851291 . + . ID=gene827;Name=SH03_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04150;old_locus_tag=SH03_04145 NZ_CP010441.1 Protein Homology CDS 850833 851291 . + 0 ID=cds792;Parent=gene827;Dbxref=Genbank:WP_001295533.1;Name=WP_001295533.1;Note=MraZ%3B UPF0040%3B crystal structure shows similarity to AbrB;gbkey=CDS;product=transcriptional regulator MraZ;protein_id=WP_001295533.1;transl_table=11 NZ_CP010441.1 RefSeq gene 851293 852234 . + . ID=gene828;Name=SH03_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04155;old_locus_tag=SH03_04150 NZ_CP010441.1 Protein Homology CDS 851293 852234 . + 0 ID=cds793;Parent=gene828;Dbxref=Genbank:WP_000970479.1;Name=WP_000970479.1;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase H;protein_id=WP_000970479.1;transl_table=11 NZ_CP010441.1 RefSeq gene 852231 852596 . + . ID=gene829;Name=SH03_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04160;old_locus_tag=SH03_04155 NZ_CP010441.1 Protein Homology CDS 852231 852596 . + 0 ID=cds794;Parent=gene829;Dbxref=Genbank:WP_000625658.1;Name=WP_000625658.1;Note=membrane bound cell division protein at septum containing leucine zipper motif;gbkey=CDS;product=cell division protein FtsL;protein_id=WP_000625658.1;transl_table=11 NZ_CP010441.1 RefSeq gene 852612 854378 . + . ID=gene830;Name=SH03_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04165;old_locus_tag=SH03_04160 NZ_CP010441.1 Protein Homology CDS 852612 854378 . + 0 ID=cds795;Parent=gene830;Dbxref=Genbank:WP_000642196.1;Name=WP_000642196.1;Note=penicillin-binding protein 3%3B transpeptidase involved in septal peptidoglycan synthesis;gbkey=CDS;product=peptidoglycan synthase FtsI;protein_id=WP_000642196.1;transl_table=11 NZ_CP010441.1 RefSeq gene 854365 855852 . + . ID=gene831;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=SH03_RS04170;old_locus_tag=SH03_04165 NZ_CP010441.1 Protein Homology CDS 854365 855852 . + 0 ID=cds796;Parent=gene831;Dbxref=Genbank:WP_000775093.1;Name=WP_000775093.1;Note=involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate;gbkey=CDS;gene=murE;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2 6-diaminopimelate ligase;protein_id=WP_000775093.1;transl_table=11 NZ_CP010441.1 RefSeq gene 855849 857207 . + . ID=gene832;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=SH03_RS04175;old_locus_tag=SH03_04170 NZ_CP010441.1 Protein Homology CDS 855849 857207 . + 0 ID=cds797;Parent=gene832;Dbxref=Genbank:WP_000626685.1;Name=WP_000626685.1;gbkey=CDS;gene=murF;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_000626685.1;transl_table=11 NZ_CP010441.1 RefSeq gene 857201 858283 . + . ID=gene833;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=SH03_RS04180;old_locus_tag=SH03_04175 NZ_CP010441.1 Protein Homology CDS 857201 858283 . + 0 ID=cds798;Parent=gene833;Dbxref=Genbank:WP_000964131.1;Name=WP_000964131.1;Note=First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan;gbkey=CDS;gene=mraY;product=phospho-N-acetylmuramoyl-pentapeptide transferase;protein_id=WP_000964131.1;transl_table=11 NZ_CP010441.1 RefSeq gene 858286 859602 . + . ID=gene834;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=SH03_RS04185;old_locus_tag=SH03_04180 NZ_CP010441.1 Protein Homology CDS 858286 859602 . + 0 ID=cds799;Parent=gene834;Dbxref=Genbank:WP_000796481.1;Name=WP_000796481.1;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;gbkey=CDS;gene=murD;product=UDP-N-acetylmuramoylalanine--D-glutamate ligase;protein_id=WP_000796481.1;transl_table=11 NZ_CP010441.1 RefSeq gene 859602 860846 . + . ID=gene835;Name=SH03_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04190;old_locus_tag=SH03_04185 NZ_CP010441.1 Protein Homology CDS 859602 860846 . + 0 ID=cds800;Parent=gene835;Dbxref=Genbank:WP_001295532.1;Name=WP_001295532.1;gbkey=CDS;product=lipid II flippase FtsW;protein_id=WP_001295532.1;transl_table=11 NZ_CP010441.1 RefSeq gene 860843 861910 . + . ID=gene836;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=SH03_RS04195;old_locus_tag=SH03_04190 NZ_CP010441.1 Protein Homology CDS 860843 861910 . + 0 ID=cds801;Parent=gene836;Dbxref=Genbank:WP_000016560.1;Name=WP_000016560.1;Note=N-acetylglucosaminyl transferase%3B UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis;gbkey=CDS;gene=murG;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=WP_000016560.1;transl_table=11 NZ_CP010441.1 RefSeq gene 861964 863439 . + . ID=gene837;Name=SH03_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04200;old_locus_tag=SH03_04195 NZ_CP010441.1 Protein Homology CDS 861964 863439 . + 0 ID=cds802;Parent=gene837;Dbxref=Genbank:WP_001096049.1;Name=WP_001096049.1;gbkey=CDS;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001096049.1;transl_table=11 NZ_CP010441.1 RefSeq gene 863432 864352 . + . ID=gene838;Name=ddl;gbkey=Gene;gene=ddl;gene_biotype=protein_coding;locus_tag=SH03_RS04205;old_locus_tag=SH03_04200 NZ_CP010441.1 Protein Homology CDS 863432 864352 . + 0 ID=cds803;Parent=gene838;Dbxref=Genbank:WP_000130056.1;Name=WP_000130056.1;Note=D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli;gbkey=CDS;gene=ddl;product=D-alanine--D-alanine ligase B;protein_id=WP_000130056.1;transl_table=11 NZ_CP010441.1 RefSeq gene 864354 865184 . + . ID=gene839;Name=SH03_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04210;old_locus_tag=SH03_04205 NZ_CP010441.1 Protein Homology CDS 864354 865184 . + 0 ID=cds804;Parent=gene839;Dbxref=Genbank:WP_000075748.1;Name=WP_000075748.1;Note=involved in septum formation;gbkey=CDS;product=cell division protein FtsQ;protein_id=WP_000075748.1;transl_table=11 NZ_CP010441.1 RefSeq gene 865181 866443 . + . ID=gene840;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=SH03_RS04215;old_locus_tag=SH03_04210 NZ_CP010441.1 Protein Homology CDS 865181 866443 . + 0 ID=cds805;Parent=gene840;Dbxref=Genbank:WP_000588474.1;Name=WP_000588474.1;Note=ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane;gbkey=CDS;gene=ftsA;product=cell division protein FtsA;protein_id=WP_000588474.1;transl_table=11 NZ_CP010441.1 RefSeq gene 866504 867655 . + . ID=gene841;Name=SH03_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04220;old_locus_tag=SH03_04215 NZ_CP010441.1 Protein Homology CDS 866504 867655 . + 0 ID=cds806;Parent=gene841;Dbxref=Genbank:WP_000462776.1;Name=WP_000462776.1;Note=GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function;gbkey=CDS;product=cell division protein FtsZ;protein_id=WP_000462776.1;transl_table=11 NZ_CP010441.1 RefSeq gene 867756 868673 . + . ID=gene842;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=SH03_RS04225;old_locus_tag=SH03_04220 NZ_CP010441.1 Protein Homology CDS 867756 868673 . + 0 ID=cds807;Parent=gene842;Dbxref=Genbank:WP_000595482.1;Name=WP_000595482.1;Note=zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis;gbkey=CDS;gene=lpxC;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=WP_000595482.1;transl_table=11 NZ_CP010441.1 RefSeq gene 868904 869416 . + . ID=gene843;Name=SH03_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04230;old_locus_tag=SH03_04225 NZ_CP010441.1 Protein Homology CDS 868904 869416 . + 0 ID=cds808;Parent=gene843;Dbxref=Genbank:WP_000014321.1;Name=WP_000014321.1;Note=secM translational pause allows for the initiation of secA translation;gbkey=CDS;product=secretion monitor;protein_id=WP_000014321.1;transl_table=11 NZ_CP010441.1 RefSeq gene 869478 872183 . + . ID=gene844;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;gene_synonym=azi,div;locus_tag=SH03_RS04235;old_locus_tag=SH03_04230 NZ_CP010441.1 Protein Homology CDS 869478 872183 . + 0 ID=cds809;Parent=gene844;Dbxref=Genbank:WP_000905789.1;Name=WP_000905789.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;gbkey=CDS;gene=secA;product=protein translocase subunit SecA;protein_id=WP_000905789.1;transl_table=11 NZ_CP010441.1 RefSeq gene 872243 872632 . + . ID=gene845;Name=SH03_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04240;old_locus_tag=SH03_04235 NZ_CP010441.1 Protein Homology CDS 872243 872632 . + 0 ID=cds810;Parent=gene845;Dbxref=Genbank:WP_000736007.1;Name=WP_000736007.1;gbkey=CDS;product=8-oxo-dGTP diphosphatase;protein_id=WP_000736007.1;transl_table=11 NZ_CP010441.1 RefSeq gene 872763 872897 . - . ID=gene846;Name=SH03_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04245;old_locus_tag=SH03_04240 NZ_CP010441.1 Protein Homology CDS 872763 872897 . - 0 ID=cds811;Parent=gene846;Dbxref=Genbank:WP_011378542.1;Name=WP_011378542.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011378542.1;transl_table=11 NZ_CP010441.1 RefSeq gene 872848 873045 . - . ID=gene847;Name=SH03_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04250;old_locus_tag=SH03_04245 NZ_CP010441.1 Protein Homology CDS 872848 873045 . - 0 ID=cds812;Parent=gene847;Dbxref=Genbank:WP_000005042.1;Name=WP_000005042.1;Note=inhibits supercoiling by DNA gyrase by binding to the GyrB subunit;gbkey=CDS;product=DNA gyrase inhibitor YacG;protein_id=WP_000005042.1;transl_table=11 NZ_CP010441.1 RefSeq gene 873055 873798 . - . ID=gene848;Name=SH03_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04255;old_locus_tag=SH03_04250 NZ_CP010441.1 Protein Homology CDS 873055 873798 . - 0 ID=cds813;Parent=gene848;Dbxref=Genbank:WP_001194734.1;Name=WP_001194734.1;gbkey=CDS;product=cell division protein ZapD;protein_id=WP_001194734.1;transl_table=11 NZ_CP010441.1 RefSeq gene 873798 874418 . - . ID=gene849;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=SH03_RS04260;old_locus_tag=SH03_04255 NZ_CP010441.1 Protein Homology CDS 873798 874418 . - 0 ID=cds814;Parent=gene849;Dbxref=Genbank:WP_001269520.1;Name=WP_001269520.1;Note=catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis;gbkey=CDS;gene=coaE;product=dephospho-CoA kinase;protein_id=WP_001269520.1;transl_table=11 NZ_CP010441.1 RefSeq gene 874643 875686 . + . ID=gene850;Name=SH03_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04265;old_locus_tag=SH03_04260 NZ_CP010441.1 Protein Homology CDS 874643 875686 . + 0 ID=cds815;Parent=gene850;Dbxref=Genbank:WP_001217338.1;Name=WP_001217338.1;Note=catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate;gbkey=CDS;product=GMP reductase;protein_id=WP_001217338.1;transl_table=11 NZ_CP010441.1 RefSeq gene 875721 876923 . - . ID=gene851;Name=SH03_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04270;old_locus_tag=SH03_04265 NZ_CP010441.1 Protein Homology CDS 875721 876923 . - 0 ID=cds816;Parent=gene851;Dbxref=Genbank:WP_000157266.1;Name=WP_000157266.1;gbkey=CDS;product=protein transport protein HofC;protein_id=WP_000157266.1;transl_table=11 NZ_CP010441.1 RefSeq gene 876913 878298 . - . ID=gene852;Name=SH03_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04275;old_locus_tag=SH03_04270 NZ_CP010441.1 Protein Homology CDS 876913 878298 . - 0 ID=cds817;Parent=gene852;Dbxref=Genbank:WP_001025145.1;Name=WP_001025145.1;gbkey=CDS;product=protein transport protein HofB;protein_id=WP_001025145.1;transl_table=11 NZ_CP010441.1 RefSeq gene 878308 878748 . - . ID=gene853;Name=SH03_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04280;old_locus_tag=SH03_04275 NZ_CP010441.1 Protein Homology CDS 878308 878748 . - 0 ID=cds818;Parent=gene853;Dbxref=Genbank:WP_000360904.1;Name=WP_000360904.1;gbkey=CDS;product=prepilin peptidase-dependent protein D;protein_id=WP_000360904.1;transl_table=11 NZ_CP010441.1 RefSeq gene 878770 878994 . + . ID=gene854;Name=SH03_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04285;old_locus_tag=SH03_04280 NZ_CP010441.1 Protein Homology CDS 878770 878994 . + 0 ID=cds819;Parent=gene854;Dbxref=Genbank:WP_032082663.1;Name=WP_032082663.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032082663.1;transl_table=11 NZ_CP010441.1 RefSeq gene 878951 879844 . - . ID=gene855;Name=SH03_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04290;old_locus_tag=SH03_04285 NZ_CP010441.1 Protein Homology CDS 878951 879844 . - 0 ID=cds820;Parent=gene855;Dbxref=Genbank:WP_001135174.1;Name=WP_001135174.1;Note=catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide;gbkey=CDS;product=nicotinate-nucleotide pyrophosphorylase [carboxylating];protein_id=WP_001135174.1;transl_table=11 NZ_CP010441.1 RefSeq gene 879932 880483 . + . ID=gene856;Name=SH03_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04295;old_locus_tag=SH03_04290 NZ_CP010441.1 Protein Homology CDS 879932 880483 . + 0 ID=cds821;Parent=gene856;Dbxref=Genbank:WP_000923721.1;Name=WP_000923721.1;gbkey=CDS;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000923721.1;transl_table=11 NZ_CP010441.1 RefSeq gene 880480 881334 . + . ID=gene857;Name=SH03_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04300;old_locus_tag=SH03_04295 NZ_CP010441.1 Protein Homology CDS 880480 881334 . + 0 ID=cds822;Parent=gene857;Dbxref=Genbank:WP_000172005.1;Name=WP_000172005.1;Note=involved in regulation of beta-lactamase%3B putative signaling protein;gbkey=CDS;product=protein AmpE;protein_id=WP_000172005.1;transl_table=11 NZ_CP010441.1 RefSeq gene 881377 882747 . - . ID=gene858;Name=SH03_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04305;old_locus_tag=SH03_04300 NZ_CP010441.1 Protein Homology CDS 881377 882747 . - 0 ID=cds823;Parent=gene858;Dbxref=Genbank:WP_000399036.1;Name=WP_000399036.1;gbkey=CDS;product=aromatic amino acid transporter;protein_id=WP_000399036.1;transl_table=11 NZ_CP010441.1 RefSeq gene 883291 884055 . + . ID=gene859;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=SH03_RS04310;old_locus_tag=SH03_04305 NZ_CP010441.1 Protein Homology CDS 883291 884055 . + 0 ID=cds824;Parent=gene859;Dbxref=Genbank:WP_000331776.1;Name=WP_000331776.1;Note=activates lctPRD operon%3B autoregulates itself through repression of pdhR-aceEF-lpdA operon%3B regulates pyruvate dehydrogenase complex;gbkey=CDS;gene=pdhR;product=pyruvate dehydrogenase complex repressor;protein_id=WP_000331776.1;transl_table=11 NZ_CP010441.1 RefSeq gene 884216 886879 . + . ID=gene860;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=SH03_RS04315;old_locus_tag=SH03_04310 NZ_CP010441.1 Protein Homology CDS 884216 886879 . + 0 ID=cds825;Parent=gene860;Dbxref=Genbank:WP_000003820.1;Name=WP_000003820.1;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;gbkey=CDS;gene=aceE;product=pyruvate dehydrogenase E1 component;protein_id=WP_000003820.1;transl_table=11 NZ_CP010441.1 RefSeq gene 886894 888786 . + . ID=gene861;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=SH03_RS04320;old_locus_tag=SH03_04315 NZ_CP010441.1 Protein Homology CDS 886894 888786 . + 0 ID=cds826;Parent=gene861;Dbxref=Genbank:WP_000963518.1;Name=WP_000963518.1;Note=E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains;gbkey=CDS;gene=aceF;product=dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex;protein_id=WP_000963518.1;transl_table=11 NZ_CP010441.1 RefSeq gene 889111 890535 . + . ID=gene862;Name=SH03_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04325;old_locus_tag=SH03_04320 NZ_CP010441.1 Protein Homology CDS 889111 890535 . + 0 ID=cds827;Parent=gene862;Dbxref=Genbank:WP_000102485.1;Name=WP_000102485.1;Note=E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;product=dihydrolipoyl dehydrogenase;protein_id=WP_000102485.1;transl_table=11 NZ_CP010441.1 RefSeq gene 890606 892459 . - . ID=gene863;Name=SH03_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04330;old_locus_tag=SH03_04325 NZ_CP010441.1 Protein Homology CDS 890606 892459 . - 0 ID=cds828;Parent=gene863;Dbxref=Genbank:WP_000784470.1;Name=WP_000784470.1;gbkey=CDS;product=DUF3300 domain-containing protein;protein_id=WP_000784470.1;transl_table=11 NZ_CP010441.1 RefSeq gene 892814 895411 . + . ID=gene864;Name=SH03_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04335;old_locus_tag=SH03_04330 NZ_CP010441.1 Protein Homology CDS 892814 895411 . + 0 ID=cds829;Parent=gene864;Dbxref=Genbank:WP_001307570.1;Name=WP_001307570.1;Note=catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate;gbkey=CDS;product=aconitate hydratase 2;protein_id=WP_001307570.1;transl_table=11 NZ_CP010441.1 RefSeq gene 895587 895949 . + . ID=gene865;Name=SH03_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04340;old_locus_tag=SH03_04335 NZ_CP010441.1 Protein Homology CDS 895587 895949 . + 0 ID=cds830;Parent=gene865;Dbxref=Genbank:WP_000384306.1;Name=WP_000384306.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000384306.1;transl_table=11 NZ_CP010441.1 RefSeq gene 895987 896781 . - . ID=gene866;Name=SH03_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04345;old_locus_tag=SH03_04340 NZ_CP010441.1 Protein Homology CDS 895987 896781 . - 0 ID=cds831;Parent=gene866;Dbxref=Genbank:WP_000734287.1;Name=WP_000734287.1;Note=S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine;gbkey=CDS;product=S-adenosylmethionine decarboxylase proenzyme;protein_id=WP_000734287.1;transl_table=11 NZ_CP010441.1 RefSeq gene 896797 897663 . - . ID=gene867;Name=SH03_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04350;old_locus_tag=SH03_04345 NZ_CP010441.1 Protein Homology CDS 896797 897663 . - 0 ID=cds832;Parent=gene867;Dbxref=Genbank:WP_000818411.1;Name=WP_000818411.1;gbkey=CDS;product=polyamine aminopropyltransferase;protein_id=WP_000818411.1;transl_table=11 NZ_CP010441.1 RefSeq gene 897769 898116 . - . ID=gene868;Name=SH03_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04355;old_locus_tag=SH03_04350 NZ_CP010441.1 Protein Homology CDS 897769 898116 . - 0 ID=cds833;Parent=gene868;Dbxref=Genbank:WP_001295568.1;Name=WP_001295568.1;gbkey=CDS;product=PulS_OutS family protein;protein_id=WP_001295568.1;transl_table=11 NZ_CP010441.1 RefSeq gene 898282 899832 . + . ID=gene869;Name=SH03_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04360;old_locus_tag=SH03_04355 NZ_CP010441.1 Protein Homology CDS 898282 899832 . + 0 ID=cds834;Parent=gene869;Dbxref=Genbank:WP_001189647.1;Name=WP_001189647.1;Note=laccase%3B copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification;gbkey=CDS;product=blue copper oxidase CueO;protein_id=WP_001189647.1;transl_table=11 NZ_CP010441.1 RefSeq gene 900034 902424 . - . ID=gene870;Name=SH03_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04365;old_locus_tag=SH03_04360 NZ_CP010441.1 Protein Homology CDS 900034 902424 . - 0 ID=cds835;Parent=gene870;Dbxref=Genbank:WP_001306211.1;Name=WP_001306211.1;Note=quinoprotein glucose dehydrogenase%3B catalyzes the formation of D-glucono-1%2C5-lactone from D-glucose and ubiquinone;gbkey=CDS;product=quinoprotein glucose dehydrogenase;protein_id=WP_001306211.1;transl_table=11 NZ_CP010441.1 RefSeq gene 902630 903166 . + . ID=gene871;Name=SH03_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04370;old_locus_tag=SH03_04365 NZ_CP010441.1 Protein Homology CDS 902630 903166 . + 0 ID=cds836;Parent=gene871;Dbxref=Genbank:WP_000683335.1;Name=WP_000683335.1;Note=catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683335.1;transl_table=11 NZ_CP010441.1 RefSeq gene 903207 903869 . - . ID=gene872;Name=SH03_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04375;old_locus_tag=SH03_04370 NZ_CP010441.1 Protein Homology CDS 903207 903869 . - 0 ID=cds837;Parent=gene872;Dbxref=Genbank:WP_000651599.1;Name=WP_000651599.1;Note=catalyzes the interconversion of bicarbonate and carbon dioxide;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_000651599.1;transl_table=11 NZ_CP010441.1 RefSeq gene 903978 904904 . + . ID=gene873;Name=SH03_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04380;old_locus_tag=SH03_04375 NZ_CP010441.1 Protein Homology CDS 903978 904904 . + 0 ID=cds838;Parent=gene873;Dbxref=Genbank:WP_000150637.1;Name=WP_000150637.1;gbkey=CDS;product=ABC transporter ATPase;protein_id=WP_000150637.1;transl_table=11 NZ_CP010441.1 RefSeq gene 904901 905671 . + . ID=gene874;Name=SH03_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04385;old_locus_tag=SH03_04380 NZ_CP010441.1 Protein Homology CDS 904901 905671 . + 0 ID=cds839;Parent=gene874;Dbxref=Genbank:WP_000972203.1;Name=WP_000972203.1;gbkey=CDS;product=inner membrane transport permease YadH;protein_id=WP_000972203.1;transl_table=11 NZ_CP010441.1 RefSeq gene 905776 906216 . + . ID=gene875;Name=SH03_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04390;old_locus_tag=SH03_04385 NZ_CP010441.1 Protein Homology CDS 905776 906216 . + 0 ID=cds840;Parent=gene875;Dbxref=Genbank:WP_000901987.1;Name=WP_000901987.1;gbkey=CDS;product=PTS Enzyme IIA;protein_id=WP_000901987.1;transl_table=11 NZ_CP010441.1 RefSeq gene 906280 907509 . + . ID=gene876;Name=SH03_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04395;old_locus_tag=SH03_04390 NZ_CP010441.1 Protein Homology CDS 906280 907509 . + 0 ID=cds841;Parent=gene876;Dbxref=Genbank:WP_000277917.1;Name=WP_000277917.1;gbkey=CDS;product=polysaccharide deacetylase lipoprotein;protein_id=WP_000277917.1;transl_table=11 NZ_CP010441.1 RefSeq gene 907513 907893 . - . ID=gene877;Name=SH03_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04400;old_locus_tag=SH03_04395 NZ_CP010441.1 Protein Homology CDS 907513 907893 . - 0 ID=cds842;Parent=gene877;Dbxref=Genbank:WP_000621515.1;Name=WP_000621515.1;gbkey=CDS;product=aspartate 1-decarboxylase;protein_id=WP_000621515.1;transl_table=11 NZ_CP010441.1 RefSeq gene 908167 909069 . + . ID=gene878;Name=SH03_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04405;old_locus_tag=SH03_04400 NZ_CP010441.1 Protein Homology CDS 908167 909069 . + 0 ID=cds843;Parent=gene878;Dbxref=Genbank:WP_000339954.1;Name=WP_000339954.1;gbkey=CDS;product=transposase;protein_id=WP_000339954.1;transl_table=11 NZ_CP010441.1 RefSeq gene 909143 909994 . - . ID=gene879;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=SH03_RS04410;old_locus_tag=SH03_04405 NZ_CP010441.1 Protein Homology CDS 909143 909994 . - 0 ID=cds844;Parent=gene879;Dbxref=Genbank:WP_000905383.1;Name=WP_000905383.1;Note=catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine;gbkey=CDS;gene=panC;product=pantothenate synthetase;protein_id=WP_000905383.1;transl_table=11 NZ_CP010441.1 RefSeq gene 910006 910800 . - . ID=gene880;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=SH03_RS04415;old_locus_tag=SH03_04410 NZ_CP010441.1 Protein Homology CDS 910006 910800 . - 0 ID=cds845;Parent=gene880;Dbxref=Genbank:WP_000805497.1;Name=WP_000805497.1;Note=catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate;gbkey=CDS;gene=panB;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_000805497.1;transl_table=11 NZ_CP010441.1 RefSeq gene 910914 912152 . - . ID=gene881;Name=SH03_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04420;old_locus_tag=SH03_04415 NZ_CP010441.1 Protein Homology CDS 910914 912152 . - 0 ID=cds846;Parent=gene881;Dbxref=Genbank:WP_000848455.1;Name=WP_000848455.1;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=WP_000848455.1;transl_table=11 NZ_CP010441.1 RefSeq gene 912202 912798 . - . ID=gene882;Name=SH03_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04425;old_locus_tag=SH03_04420 NZ_CP010441.1 Protein Homology CDS 912202 912798 . - 0 ID=cds847;Parent=gene882;Dbxref=Genbank:WP_000553749.1;Name=WP_000553749.1;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=WP_000553749.1;transl_table=11 NZ_CP010441.1 RefSeq gene 912825 913427 . - . ID=gene883;Name=SH03_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04430;old_locus_tag=SH03_04425 NZ_CP010441.1 Protein Homology CDS 912825 913427 . - 0 ID=cds848;Parent=gene883;Dbxref=Genbank:WP_000143198.1;Name=WP_000143198.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_000143198.1;transl_table=11 NZ_CP010441.1 RefSeq gene 913442 914011 . - . ID=gene884;Name=SH03_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04435;old_locus_tag=SH03_04430 NZ_CP010441.1 Protein Homology CDS 913442 914011 . - 0 ID=cds849;Parent=gene884;Dbxref=Genbank:WP_000598300.1;Name=WP_000598300.1;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=WP_000598300.1;transl_table=11 NZ_CP010441.1 RefSeq gene 914028 916625 . - . ID=gene885;Name=SH03_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04440;old_locus_tag=SH03_04435 NZ_CP010441.1 Protein Homology CDS 914028 916625 . - 0 ID=cds850;Parent=gene885;Dbxref=Genbank:WP_000151605.1;Name=WP_000151605.1;Note=similar to the fimbrial usher protein PapC;gbkey=CDS;product=outer membrane usher protein HtrE;protein_id=WP_000151605.1;transl_table=11 NZ_CP010441.1 RefSeq gene 916660 917400 . - . ID=gene886;Name=ecpD;gbkey=Gene;gene=ecpD;gene_biotype=protein_coding;gene_synonym=staB,stkB;locus_tag=SH03_RS04445;old_locus_tag=SH03_04440 NZ_CP010441.1 Protein Homology CDS 916660 917400 . - 0 ID=cds851;Parent=gene886;Dbxref=Genbank:WP_000465928.1;Name=WP_000465928.1;gbkey=CDS;gene=ecpD;product=fimbrial chaperone;protein_id=WP_000465928.1;transl_table=11 NZ_CP010441.1 RefSeq gene 917498 918082 . - . ID=gene887;Name=SH03_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04450;old_locus_tag=SH03_04445 NZ_CP010441.1 Protein Homology CDS 917498 918082 . - 0 ID=cds852;Parent=gene887;Dbxref=Genbank:WP_000038438.1;Name=WP_000038438.1;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=WP_000038438.1;transl_table=11 NZ_CP010441.1 RefSeq gene 918452 918931 . - . ID=gene888;Name=SH03_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04455;old_locus_tag=SH03_04450 NZ_CP010441.1 Protein Homology CDS 918452 918931 . - 0 ID=cds853;Parent=gene888;Dbxref=Genbank:WP_000215139.1;Name=WP_000215139.1;Note=catalyzes the formation of 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine and ATP;gbkey=CDS;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=WP_000215139.1;transl_table=11 NZ_CP010441.1 RefSeq gene 918928 920292 . - . ID=gene889;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=SH03_RS04460;old_locus_tag=SH03_04455 NZ_CP010441.1 Protein Homology CDS 918928 920292 . - 0 ID=cds854;Parent=gene889;Dbxref=Genbank:WP_001297048.1;Name=WP_001297048.1;Note=Polymerase that creates the 3' poly(A) tail found in some mRNA's;gbkey=CDS;gene=pcnB;product=poly(A) polymerase I;protein_id=WP_001297048.1;transl_table=11 NZ_CP010441.1 RefSeq gene 920385 921281 . - . ID=gene890;Name=SH03_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04465;old_locus_tag=SH03_04460 NZ_CP010441.1 Protein Homology CDS 920385 921281 . - 0 ID=cds855;Parent=gene890;Dbxref=Genbank:WP_000132715.1;Name=WP_000132715.1;Note=this tRNA synthetase lacks the tRNA anticodon interaction domain%3B instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4%2C5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp%3B the modified tRNA does not bind elongation factor Tu;gbkey=CDS;product=glutamyl-Q tRNA(Asp) ligase;protein_id=WP_000132715.1;transl_table=11 NZ_CP010441.1 RefSeq gene 921348 921803 . - . ID=gene891;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=SH03_RS04470;old_locus_tag=SH03_04465 NZ_CP010441.1 Protein Homology CDS 921348 921803 . - 0 ID=cds856;Parent=gene891;Dbxref=Genbank:WP_001155227.1;Name=WP_001155227.1;gbkey=CDS;gene=dksA;product=RNA polymerase-binding transcription factor DksA;protein_id=WP_001155227.1;transl_table=11 NZ_CP010441.1 RefSeq gene 921981 922685 . - . ID=gene892;Name=SH03_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04475;old_locus_tag=SH03_04470 NZ_CP010441.1 Protein Homology CDS 921981 922685 . - 0 ID=cds857;Parent=gene892;Dbxref=Genbank:WP_000396036.1;Name=WP_000396036.1;gbkey=CDS;product=sugar fermentation stimulation protein A;protein_id=WP_000396036.1;transl_table=11 NZ_CP010441.1 RefSeq gene 922700 923230 . - . ID=gene893;Name=SH03_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04480;old_locus_tag=SH03_04475 NZ_CP010441.1 Protein Homology CDS 922700 923230 . - 0 ID=cds858;Parent=gene893;Dbxref=Genbank:WP_001294700.1;Name=WP_001294700.1;Note=catalyzes the ligation and cleavage of of 2'-5' linkages in RNA;gbkey=CDS;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_001294700.1;transl_table=11 NZ_CP010441.1 RefSeq gene 923259 925733 . + . ID=gene894;Name=SH03_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04485;old_locus_tag=SH03_04480 NZ_CP010441.1 Protein Homology CDS 923259 925733 . + 0 ID=cds859;Parent=gene894;Dbxref=Genbank:WP_000938610.1;Name=WP_000938610.1;Note=similar in sequence to the ATP-dependent RNA helicase HrpA;gbkey=CDS;product=RNA helicase;protein_id=WP_000938610.1;transl_table=11 NZ_CP010441.1 RefSeq gene 925736 925942 . + . ID=gene895;Name=SH03_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04490;old_locus_tag=SH03_04485 NZ_CP010441.1 Protein Homology CDS 925736 925942 . + 0 ID=cds860;Parent=gene895;Dbxref=Genbank:WP_001347263.1;Name=WP_001347263.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001347263.1;transl_table=11 NZ_CP010441.1 RefSeq gene 925929 928463 . + . ID=gene896;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;gene_synonym=ponB;locus_tag=SH03_RS04495;old_locus_tag=SH03_04490 NZ_CP010441.1 Protein Homology CDS 925929 928463 . + 0 ID=cds861;Parent=gene896;Dbxref=Genbank:WP_000918162.1;Name=WP_000918162.1;Note=penicillin-binding protein 1b%3B contains transglycosylase and transpeptidase activity%3B major enzyme for peptidoglycan biosynthesis in Escherichia coli%3B transmembrane protein%3B forms dimers%3B three variants%2C one of which may be a degradation product%2C while the other appears to result from an alternative initiation site%2C are found within the cell;gbkey=CDS;gene=mrcB;product=penicillin-binding protein 1B;protein_id=WP_000918162.1;transl_table=11 NZ_CP010441.1 RefSeq gene 928683 930926 . + . ID=gene897;Name=SH03_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04500;old_locus_tag=SH03_04495 NZ_CP010441.1 Protein Homology CDS 928683 930926 . + 0 ID=cds862;Parent=gene897;Dbxref=Genbank:WP_000124438.1;Name=WP_000124438.1;Note=involved with the transport of ferrichrome across the outer membrane%3B binds the ferrichrome-iron ligand and interacts with the TonB protein;gbkey=CDS;product=ferrichrome-iron receptor;protein_id=WP_000124438.1;transl_table=11 NZ_CP010441.1 RefSeq gene 930977 931774 . + . ID=gene898;Name=SH03_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04505;old_locus_tag=SH03_04500 NZ_CP010441.1 Protein Homology CDS 930977 931774 . + 0 ID=cds863;Parent=gene898;Dbxref=Genbank:WP_001158931.1;Name=WP_001158931.1;Note=part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter;gbkey=CDS;product=iron(3+)-hydroxamate import ATP-binding protein FhuC;protein_id=WP_001158931.1;transl_table=11 NZ_CP010441.1 RefSeq gene 931774 932664 . + . ID=gene899;Name=SH03_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04510;old_locus_tag=SH03_04505 NZ_CP010441.1 Protein Homology CDS 931774 932664 . + 0 ID=cds864;Parent=gene899;Dbxref=Genbank:WP_001310529.1;Name=WP_001310529.1;Note=Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter%3B binds to all hydroxamate siderophores;gbkey=CDS;product=iron(3+)-hydroxamate-binding protein FhuD;protein_id=WP_001310529.1;transl_table=11 NZ_CP010441.1 RefSeq gene 932661 934643 . + . ID=gene900;Name=SH03_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04515;old_locus_tag=SH03_04510 NZ_CP010441.1 Protein Homology CDS 932661 934643 . + 0 ID=cds865;Parent=gene900;Dbxref=Genbank:WP_000044072.1;Name=WP_000044072.1;gbkey=CDS;product=iron(3+)-hydroxamate import system permease FhuB;protein_id=WP_000044072.1;transl_table=11 NZ_CP010441.1 RefSeq gene 934801 936081 . - . ID=gene901;Name=SH03_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04520;old_locus_tag=SH03_04515 NZ_CP010441.1 Protein Homology CDS 934801 936081 . - 0 ID=cds866;Parent=gene901;Dbxref=Genbank:WP_000045315.1;Name=WP_000045315.1;Note=Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway;gbkey=CDS;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_000045315.1;transl_table=11 NZ_CP010441.1 RefSeq gene 936306 937727 . + . ID=gene902;Name=SH03_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04525;old_locus_tag=SH03_04520 NZ_CP010441.1 Protein Homology CDS 936306 937727 . + 0 ID=cds867;Parent=gene902;Dbxref=Genbank:WP_000845394.1;Name=WP_000845394.1;Note=Acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation;gbkey=CDS;product=H+/Cl- exchange transporter ClcA;protein_id=WP_000845394.1;transl_table=11 NZ_CP010441.1 RefSeq gene 937809 938153 . + . ID=gene903;Name=SH03_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04530;old_locus_tag=SH03_04525 NZ_CP010441.1 Protein Homology CDS 937809 938153 . + 0 ID=cds868;Parent=gene903;Dbxref=Genbank:WP_001295564.1;Name=WP_001295564.1;Note=essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors;gbkey=CDS;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001295564.1;transl_table=11 NZ_CP010441.1 RefSeq gene 938200 938823 . - . ID=gene904;Name=SH03_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04535;old_locus_tag=SH03_04530 NZ_CP010441.1 Protein Homology CDS 938200 938823 . - 0 ID=cds869;Parent=gene904;Dbxref=Genbank:WP_000964221.1;Name=WP_000964221.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000964221.1;transl_table=11 NZ_CP010441.1 RefSeq gene 938861 939661 . - . ID=gene905;Name=SH03_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04540;old_locus_tag=SH03_04535 NZ_CP010441.1 Protein Homology CDS 938861 939661 . - 0 ID=cds870;Parent=gene905;Dbxref=Genbank:WP_001129927.1;Name=WP_001129927.1;Note=solute binding component of the vitamin B12 transport system BtuCDF;gbkey=CDS;product=vitamin B12-binding protein;protein_id=WP_001129927.1;transl_table=11 NZ_CP010441.1 RefSeq gene 939654 940352 . - . ID=gene906;Name=SH03_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04545;old_locus_tag=SH03_04540 NZ_CP010441.1 Protein Homology CDS 939654 940352 . - 0 ID=cds871;Parent=gene906;Dbxref=Genbank:WP_000689844.1;Name=WP_000689844.1;Note=enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine;gbkey=CDS;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689844.1;transl_table=11 NZ_CP010441.1 RefSeq gene 940436 941953 . + . ID=gene907;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=SH03_RS04550;old_locus_tag=SH03_04545 NZ_CP010441.1 Protein Homology CDS 940436 941953 . + 0 ID=cds872;Parent=gene907;Dbxref=Genbank:WP_000057073.1;Name=WP_000057073.1;Note=forms a homotetramer%3B requires magnesium for activity%3B catalyzes the hydrolysis of dGTP to form deoxyguanosine and triphosphate;gbkey=CDS;gene=dgt;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=WP_000057073.1;transl_table=11 NZ_CP010441.1 RefSeq gene 942083 943507 . + . ID=gene908;Name=SH03_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04555;old_locus_tag=SH03_04550 NZ_CP010441.1 Protein Homology CDS 942083 943507 . + 0 ID=cds873;Parent=gene908;Dbxref=Genbank:WP_000753946.1;Name=WP_000753946.1;Note=protease Do%3B required at high temperature%3B degrades damaged proteins;gbkey=CDS;product=periplasmic serine endoprotease DegP;protein_id=WP_000753946.1;transl_table=11 NZ_CP010441.1 RefSeq gene 943662 944819 . + . ID=gene909;Name=SH03_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04560;old_locus_tag=SH03_04555 NZ_CP010441.1 Protein Homology CDS 943662 944819 . + 0 ID=cds874;Parent=gene909;Dbxref=Genbank:WP_000929443.1;Name=WP_000929443.1;Note=regulates the expression of the operons for the enzymes involved in galactarate%2C glucarate and glycerate utilization;gbkey=CDS;product=carbohydrate diacid regulator;protein_id=WP_000929443.1;transl_table=11 NZ_CP010441.1 RefSeq gene 944908 945294 . - . ID=gene910;Name=SH03_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04565;old_locus_tag=SH03_04560 NZ_CP010441.1 Protein Homology CDS 944908 945294 . - 0 ID=cds875;Parent=gene910;Dbxref=Genbank:WP_000272188.1;Name=WP_000272188.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000272188.1;transl_table=11 NZ_CP010441.1 RefSeq gene 945456 946268 . - . ID=gene911;Name=SH03_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04570;old_locus_tag=SH03_04565 NZ_CP010441.1 Protein Homology CDS 945456 946268 . - 0 ID=cds876;Parent=gene911;Dbxref=Genbank:WP_000625631.1;Name=WP_000625631.1;gbkey=CDS;product=phosphodiesterase YaeI;protein_id=WP_000625631.1;transl_table=11 NZ_CP010441.1 RefSeq gene 946322 947146 . - . ID=gene912;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=SH03_RS04575;old_locus_tag=SH03_04570 NZ_CP010441.1 Protein Homology CDS 946322 947146 . - 0 ID=cds877;Parent=gene912;Dbxref=Genbank:WP_001186650.1;Name=WP_001186650.1;Note=catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway;gbkey=CDS;gene=dapD;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186650.1;transl_table=11 NZ_CP010441.1 RefSeq gene 947177 949849 . - . ID=gene913;Name=SH03_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04580;old_locus_tag=SH03_04575 NZ_CP010441.1 Protein Homology CDS 947177 949849 . - 0 ID=cds878;Parent=gene913;Dbxref=Genbank:WP_001094586.1;Name=WP_001094586.1;Note=catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein;gbkey=CDS;product=uridylyltransferase;protein_id=WP_001094586.1;transl_table=11 NZ_CP010441.1 RefSeq gene 949911 950705 . - . ID=gene914;Name=SH03_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04585;old_locus_tag=SH03_04580 NZ_CP010441.1 Protein Homology CDS 949911 950705 . - 0 ID=cds879;Parent=gene914;Dbxref=Genbank:WP_001018194.1;Name=WP_001018194.1;Note=catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn;gbkey=CDS;product=methionine aminopeptidase;protein_id=WP_001018194.1;transl_table=11 NZ_CP010441.1 RefSeq gene 951073 951798 . + . ID=gene915;Name=SH03_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04590;old_locus_tag=SH03_04585 NZ_CP010441.1 Protein Homology CDS 951073 951798 . + 0 ID=cds880;Parent=gene915;Dbxref=Genbank:WP_000246882.1;Name=WP_000246882.1;gbkey=CDS;product=30S ribosomal protein S2;protein_id=WP_000246882.1;transl_table=11 NZ_CP010441.1 RefSeq gene 952056 952907 . + . ID=gene916;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=SH03_RS04595;old_locus_tag=SH03_04590 NZ_CP010441.1 Protein Homology CDS 952056 952907 . + 0 ID=cds881;Parent=gene916;Dbxref=Genbank:WP_000818114.1;Name=WP_000818114.1;Note=EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu;gbkey=CDS;gene=tsf;product=elongation factor Ts;protein_id=WP_000818114.1;transl_table=11 NZ_CP010441.1 RefSeq gene 953054 953779 . + . ID=gene917;Name=SH03_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04600;old_locus_tag=SH03_04595 NZ_CP010441.1 Protein Homology CDS 953054 953779 . + 0 ID=cds882;Parent=gene917;Dbxref=Genbank:WP_000224573.1;Name=WP_000224573.1;gbkey=CDS;product=uridylate kinase;protein_id=WP_000224573.1;transl_table=11 NZ_CP010441.1 RefSeq gene 954071 954628 . + . ID=gene918;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=SH03_RS04605;old_locus_tag=SH03_04600 NZ_CP010441.1 Protein Homology CDS 954071 954628 . + 0 ID=cds883;Parent=gene918;Dbxref=Genbank:WP_000622418.1;Name=WP_000622418.1;Note=Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs;gbkey=CDS;gene=frr;product=ribosome-recycling factor;protein_id=WP_000622418.1;transl_table=11 NZ_CP010441.1 RefSeq gene 954720 955916 . + . ID=gene919;Name=SH03_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04610;old_locus_tag=SH03_04605 NZ_CP010441.1 Protein Homology CDS 954720 955916 . + 0 ID=cds884;Parent=gene919;Dbxref=Genbank:WP_000811923.1;Name=WP_000811923.1;Note=catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate;gbkey=CDS;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=WP_000811923.1;transl_table=11 NZ_CP010441.1 RefSeq gene 956105 956863 . + . ID=gene920;Name=SH03_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04615;old_locus_tag=SH03_04610 NZ_CP010441.1 Protein Homology CDS 956105 956863 . + 0 ID=cds885;Parent=gene920;Dbxref=Genbank:WP_001295562.1;Name=WP_001295562.1;Note=catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate;gbkey=CDS;product=UDP pyrophosphate synthase;protein_id=WP_001295562.1;transl_table=11 NZ_CP010441.1 RefSeq gene 956876 957733 . + . ID=gene921;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=SH03_RS04620;old_locus_tag=SH03_04615 NZ_CP010441.1 Protein Homology CDS 956876 957733 . + 0 ID=cds886;Parent=gene921;Dbxref=Genbank:WP_000922446.1;Name=WP_000922446.1;Note=catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate;gbkey=CDS;gene=cdsA;product=phosphatidate cytidylyltransferase;protein_id=WP_000922446.1;transl_table=11 NZ_CP010441.1 RefSeq gene 957745 959097 . + . ID=gene922;Name=SH03_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04625;old_locus_tag=SH03_04620 NZ_CP010441.1 Protein Homology CDS 957745 959097 . + 0 ID=cds887;Parent=gene922;Dbxref=Genbank:WP_001295561.1;Name=WP_001295561.1;Note=catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response;gbkey=CDS;product=inner membrane zinc RIP metalloprotease%3B RpoE activator%2C by degrading RseA%3B cleaved signal peptide endoprotease;protein_id=WP_001295561.1;transl_table=11 NZ_CP010441.1 RefSeq gene 959127 961559 . + . ID=gene923;Name=SH03_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04630;old_locus_tag=SH03_04625 NZ_CP010441.1 Protein Homology CDS 959127 961559 . + 0 ID=cds888;Parent=gene923;Dbxref=Genbank:WP_001240896.1;Name=WP_001240896.1;Note=part of a complex with YfgL%2C YfiO%2C and NlpB involved in outer membrane protein biosynthesis%3B involved in the assembly of outer membrane proteins;gbkey=CDS;product=outer membrane protein assembly factor BamA;protein_id=WP_001240896.1;transl_table=11 NZ_CP010441.1 RefSeq gene 961681 962166 . + . ID=gene924;Name=SH03_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04635;old_locus_tag=SH03_04630 NZ_CP010441.1 Protein Homology CDS 961681 962166 . + 0 ID=cds889;Parent=gene924;Dbxref=Genbank:WP_000758956.1;Name=WP_000758956.1;gbkey=CDS;product=chaperone protein Skp;protein_id=WP_000758956.1;transl_table=11 NZ_CP010441.1 RefSeq gene 962170 963195 . + . ID=gene925;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=SH03_RS04640;old_locus_tag=SH03_04635 NZ_CP010441.1 Protein Homology CDS 962170 963195 . + 0 ID=cds890;Parent=gene925;Dbxref=Genbank:WP_001139279.1;Name=WP_001139279.1;Note=adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis;gbkey=CDS;gene=lpxD;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_001139279.1;transl_table=11 NZ_CP010441.1 RefSeq gene 963300 963755 . + . ID=gene926;Name=SH03_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04645;old_locus_tag=SH03_04640 NZ_CP010441.1 Protein Homology CDS 963300 963755 . + 0 ID=cds891;Parent=gene926;Dbxref=Genbank:WP_000210739.1;Name=WP_000210739.1;gbkey=CDS;product=3-hydroxyacyl-ACP dehydratase;protein_id=WP_000210739.1;transl_table=11 NZ_CP010441.1 RefSeq gene 963759 964547 . + . ID=gene927;Name=SH03_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04650;old_locus_tag=SH03_04645 NZ_CP010441.1 Protein Homology CDS 963759 964547 . + 0 ID=cds892;Parent=gene927;Dbxref=Genbank:WP_000565966.1;Name=WP_000565966.1;Note=catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis;gbkey=CDS;product=acyl-ACP-UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_000565966.1;transl_table=11 NZ_CP010441.1 RefSeq gene 964547 965695 . + . ID=gene928;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=SH03_RS04655;old_locus_tag=SH03_04650 NZ_CP010441.1 Protein Homology CDS 964547 965695 . + 0 ID=cds893;Parent=gene928;Dbxref=Genbank:WP_000139654.1;Name=WP_000139654.1;Note=catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM;gbkey=CDS;gene=lpxB;product=lipid-A-disaccharide synthase;protein_id=WP_000139654.1;transl_table=11 NZ_CP010441.1 RefSeq gene 965692 966288 . + . ID=gene929;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=SH03_RS04660;old_locus_tag=SH03_04655 NZ_CP010441.1 Protein Homology CDS 965692 966288 . + 0 ID=cds894;Parent=gene929;Dbxref=Genbank:WP_000569430.1;Name=WP_000569430.1;Note=RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids;gbkey=CDS;gene=rnhB;product=ribonuclease HII;protein_id=WP_000569430.1;transl_table=11 NZ_CP010441.1 RefSeq gene 966325 969807 . + . ID=gene930;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=SH03_RS04665;old_locus_tag=SH03_04660 NZ_CP010441.1 Protein Homology CDS 966325 969807 . + 0 ID=cds895;Parent=gene930;Dbxref=Genbank:WP_001294757.1;Name=WP_001294757.1;Note=catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase;gbkey=CDS;gene=dnaE;product=DNA polymerase III subunit alpha;protein_id=WP_001294757.1;transl_table=11 NZ_CP010441.1 RefSeq gene 969820 970779 . + . ID=gene931;Name=SH03_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04670;old_locus_tag=SH03_04665 NZ_CP010441.1 Protein Homology CDS 969820 970779 . + 0 ID=cds896;Parent=gene931;Dbxref=Genbank:WP_000055741.1;Name=WP_000055741.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein;gbkey=CDS;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_000055741.1;transl_table=11 NZ_CP010441.1 RefSeq gene 970878 973019 . + . ID=gene932;Name=SH03_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04675;old_locus_tag=SH03_04670 NZ_CP010441.1 Protein Homology CDS 970878 973019 . + 0 ID=cds897;Parent=gene932;Dbxref=Genbank:WP_001020973.1;Name=WP_001020973.1;Note=constitutive%3B catalyzes the formation of cadaverine from lysine;gbkey=CDS;product=lysine decarboxylase constitutive;protein_id=WP_001020973.1;transl_table=11 NZ_CP010441.1 RefSeq gene 973076 973465 . + . ID=gene933;Name=SH03_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04680;old_locus_tag=SH03_04675 NZ_CP010441.1 Protein Homology CDS 973076 973465 . + 0 ID=cds898;Parent=gene933;Dbxref=Genbank:WP_000901099.1;Name=WP_000901099.1;gbkey=CDS;product=lyase;protein_id=WP_000901099.1;transl_table=11 NZ_CP010441.1 RefSeq gene 973530 974828 . + . ID=gene934;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=SH03_RS04685;old_locus_tag=SH03_04680 NZ_CP010441.1 Protein Homology CDS 973530 974828 . + 0 ID=cds899;Parent=gene934;Dbxref=Genbank:WP_000176549.1;Name=WP_000176549.1;Note=Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU%3B ATP-dependent%3B responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase;gbkey=CDS;gene=tilS;product=tRNA(Ile)-lysidine synthase;protein_id=WP_000176549.1;transl_table=11 NZ_CP010441.1 RefSeq gene 974877 975137 . - . ID=gene935;Name=SH03_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04690;old_locus_tag=SH03_04685 NZ_CP010441.1 Protein Homology CDS 974877 975137 . - 0 ID=cds900;Parent=gene935;Dbxref=Genbank:WP_000062312.1;Name=WP_000062312.1;Note=Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination;gbkey=CDS;product=Rho-binding antiterminator;protein_id=WP_000062312.1;transl_table=11 NZ_CP010441.1 RefSeq gene 975124 975324 . - . ID=gene936;Name=SH03_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04695;old_locus_tag=SH03_04690 NZ_CP010441.1 Protein Homology CDS 975124 975324 . - 0 ID=cds901;Parent=gene936;Dbxref=Genbank:WP_000417058.1;Name=WP_000417058.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000417058.1;transl_table=11 NZ_CP010441.1 RefSeq gene 975490 976035 . + . ID=gene937;Name=SH03_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04700;old_locus_tag=SH03_04695 NZ_CP010441.1 Protein Homology CDS 975490 976035 . + 0 ID=cds902;Parent=gene937;Dbxref=Genbank:WP_001185290.1;Name=WP_001185290.1;gbkey=CDS;product=PDDEXK superfamily protein;protein_id=WP_001185290.1;transl_table=11 NZ_CP010441.1 RefSeq gene 976032 976454 . + . ID=gene938;Name=SH03_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04705;old_locus_tag=SH03_04700 NZ_CP010441.1 Protein Homology CDS 976032 976454 . + 0 ID=cds903;Parent=gene938;Dbxref=Genbank:WP_000635537.1;Name=WP_000635537.1;gbkey=CDS;product=peptidyl-tRNA hydrolase ArfB;protein_id=WP_000635537.1;transl_table=11 NZ_CP010441.1 RefSeq gene 976468 977178 . + . ID=gene939;Name=SH03_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04710;old_locus_tag=SH03_04705 NZ_CP010441.1 Protein Homology CDS 976468 977178 . + 0 ID=cds904;Parent=gene939;Dbxref=Genbank:WP_000239163.1;Name=WP_000239163.1;gbkey=CDS;product=lipoprotein NlpE;protein_id=WP_000239163.1;transl_table=11 NZ_CP010441.1 RefSeq gene 977378 978202 . - . ID=gene940;Name=SH03_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04715;old_locus_tag=SH03_04710 NZ_CP010441.1 Protein Homology CDS 977378 978202 . - 0 ID=cds905;Parent=gene940;Dbxref=Genbank:WP_001336393.1;Name=WP_001336393.1;gbkey=CDS;product=endopeptidase;protein_id=WP_001336393.1;transl_table=11 NZ_CP010441.1 RefSeq gene 978256 979974 . - . ID=gene941;Name=SH03_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04720;old_locus_tag=SH03_04715 NZ_CP010441.1 Protein Homology CDS 978256 979974 . - 0 ID=cds906;Parent=gene941;Dbxref=Genbank:WP_001260717.1;Name=WP_001260717.1;Note=catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro);gbkey=CDS;product=proline--tRNA ligase;protein_id=WP_001260717.1;transl_table=11 NZ_CP010441.1 RefSeq gene 980086 980793 . - . ID=gene942;Name=SH03_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04725;old_locus_tag=SH03_04720 NZ_CP010441.1 Protein Homology CDS 980086 980793 . - 0 ID=cds907;Parent=gene942;Dbxref=Genbank:WP_000094011.1;Name=WP_000094011.1;gbkey=CDS;product=tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA;protein_id=WP_000094011.1;transl_table=11 NZ_CP010441.1 RefSeq gene 980790 981194 . - . ID=gene943;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=SH03_RS04730;old_locus_tag=SH03_04725 NZ_CP010441.1 Protein Homology CDS 980790 981194 . - 0 ID=cds908;Parent=gene943;Dbxref=Genbank:WP_001202329.1;Name=WP_001202329.1;gbkey=CDS;gene=rcsF;product=hypothetical protein;protein_id=WP_001202329.1;transl_table=11 NZ_CP010441.1 RefSeq gene 981312 982127 . - . ID=gene944;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=SH03_RS04735;old_locus_tag=SH03_04730 NZ_CP010441.1 Protein Homology CDS 981312 982127 . - 0 ID=cds909;Parent=gene944;Dbxref=Genbank:WP_000874226.1;Name=WP_000874226.1;gbkey=CDS;gene=metQ;product=D-methionine-binding lipoprotein MetQ;protein_id=WP_000874226.1;transl_table=11 NZ_CP010441.1 RefSeq gene 982167 982820 . - . ID=gene945;Name=SH03_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04740;old_locus_tag=SH03_04735 NZ_CP010441.1 Protein Homology CDS 982167 982820 . - 0 ID=cds910;Parent=gene945;Dbxref=Genbank:WP_001294600.1;Name=WP_001294600.1;Note=part of the MetNIQ methionine uptake system;gbkey=CDS;product=methionine ABC transporter;protein_id=WP_001294600.1;transl_table=11 NZ_CP010441.1 RefSeq gene 982813 983844 . - . ID=gene946;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=SH03_RS04745;old_locus_tag=SH03_04740 NZ_CP010441.1 Protein Homology CDS 982813 983844 . - 0 ID=cds911;Parent=gene946;Dbxref=Genbank:WP_000594006.1;Name=WP_000594006.1;Note=part of the metNIQ transport system for methionine;gbkey=CDS;gene=metN;product=methionine import ATP-binding protein MetN;protein_id=WP_000594006.1;transl_table=11 NZ_CP010441.1 RefSeq gene 984032 984607 . + . ID=gene947;Name=SH03_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04750;old_locus_tag=SH03_04745 NZ_CP010441.1 Protein Homology CDS 984032 984607 . + 0 ID=cds912;Parent=gene947;Dbxref=Genbank:WP_001140187.1;Name=WP_001140187.1;Note=Converts the D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate;gbkey=CDS;product=D-glycero-beta-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase;protein_id=WP_001140187.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 984664 990204 . + . ID=id56;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 984968 986523 . + . ID=gene948;Name=SH03_RS04755;gbkey=Gene;gene_biotype=rRNA;locus_tag=SH03_RS04755;old_locus_tag=SH03_04750 NZ_CP010441.1 RefSeq rRNA 984968 986523 . + . ID=rna35;Parent=gene948;gbkey=rRNA;product=16S ribosomal RNA NZ_CP010441.1 RefSeq exon 984968 986523 . + . ID=id57;Parent=rna35;gbkey=rRNA;product=16S ribosomal RNA NZ_CP010441.1 RefSeq gene 986580 986656 . + . ID=gene949;Name=SH03_RS04760;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS04760;old_locus_tag=SH03_04755 NZ_CP010441.1 tRNAscan-SE tRNA 986580 986656 . + . ID=rna36;Parent=gene949;anticodon=(pos:986614..986616);gbkey=tRNA;product=tRNA-Ile NZ_CP010441.1 tRNAscan-SE exon 986580 986656 . + . ID=id58;Parent=rna36;anticodon=(pos:986614..986616);gbkey=tRNA;product=tRNA-Ile NZ_CP010441.1 RefSeq gene 986699 986774 . + . ID=gene950;Name=SH03_RS04765;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS04765;old_locus_tag=SH03_04760 NZ_CP010441.1 tRNAscan-SE tRNA 986699 986774 . + . ID=rna37;Parent=gene950;anticodon=(pos:986732..986734);gbkey=tRNA;product=tRNA-Ala NZ_CP010441.1 tRNAscan-SE exon 986699 986774 . + . ID=id59;Parent=rna37;anticodon=(pos:986732..986734);gbkey=tRNA;product=tRNA-Ala NZ_CP010441.1 RefSeq gene 986949 989878 . + . ID=gene951;Name=SH03_RS04770;gbkey=Gene;gene_biotype=rRNA;locus_tag=SH03_RS04770;old_locus_tag=SH03_04765 NZ_CP010441.1 RefSeq rRNA 986949 989878 . + . ID=rna38;Parent=gene951;gbkey=rRNA;product=23S ribosomal RNA NZ_CP010441.1 RefSeq exon 986949 989878 . + . ID=id60;Parent=rna38;gbkey=rRNA;product=23S ribosomal RNA NZ_CP010441.1 RefSeq gene 989957 990072 . + . ID=gene952;Name=SH03_RS04775;gbkey=Gene;gene_biotype=rRNA;locus_tag=SH03_RS04775;old_locus_tag=SH03_04770 NZ_CP010441.1 cmsearch rRNA 989957 990072 . + . ID=rna39;Parent=gene952;gbkey=rRNA;product=5S ribosomal RNA NZ_CP010441.1 cmsearch exon 989957 990072 . + . ID=id61;Parent=rna39;gbkey=rRNA;product=5S ribosomal RNA NZ_CP010441.1 RefSeq gene 990127 990203 . + . ID=gene953;Name=SH03_RS04780;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS04780;old_locus_tag=SH03_04775 NZ_CP010441.1 tRNAscan-SE tRNA 990127 990203 . + . ID=rna40;Parent=gene953;anticodon=(pos:990161..990163);gbkey=tRNA;product=tRNA-Asp NZ_CP010441.1 tRNAscan-SE exon 990127 990203 . + . ID=id62;Parent=rna40;anticodon=(pos:990161..990163);gbkey=tRNA;product=tRNA-Asp NZ_CP010441.1 RefSeq gene 990366 991169 . + . ID=gene954;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=SH03_RS04785;old_locus_tag=SH03_04780 NZ_CP010441.1 Protein Homology CDS 990366 991169 . + 0 ID=cds913;Parent=gene954;Dbxref=Genbank:WP_000997010.1;Name=WP_000997010.1;Note=catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid;gbkey=CDS;gene=dkgB;product=2%2C5-diketo-D-gluconic acid reductase B;protein_id=WP_000997010.1;transl_table=11 NZ_CP010441.1 RefSeq gene 991166 992080 . - . ID=gene955;Name=SH03_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04790;old_locus_tag=SH03_04785 NZ_CP010441.1 Protein Homology CDS 991166 992080 . - 0 ID=cds914;Parent=gene955;Dbxref=Genbank:WP_000648572.1;Name=WP_000648572.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_000648572.1;transl_table=11 NZ_CP010441.1 RefSeq gene 992321 993121 . + . ID=gene956;Name=SH03_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04795;old_locus_tag=SH03_04790 NZ_CP010441.1 Protein Homology CDS 992321 993121 . + 0 ID=cds915;Parent=gene956;Dbxref=Genbank:WP_001230983.1;Name=WP_001230983.1;gbkey=CDS;product=endo/exonuclease/phosphatase;protein_id=WP_001230983.1;transl_table=11 NZ_CP010441.1 RefSeq gene 993125 993748 . + . ID=gene957;Name=SH03_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04800;old_locus_tag=SH03_04795 NZ_CP010441.1 Protein Homology CDS 993125 993748 . + 0 ID=cds916;Parent=gene957;Dbxref=Genbank:WP_000016007.1;Name=WP_000016007.1;gbkey=CDS;product=S-adenosyl-L-methionine-dependent methyltransferase;protein_id=WP_000016007.1;transl_table=11 NZ_CP010441.1 RefSeq gene 993796 995154 . - . ID=gene958;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;gene_synonym=dniR,yafG;locus_tag=SH03_RS04805;old_locus_tag=SH03_04800 NZ_CP010441.1 Protein Homology CDS 993796 995154 . - 0 ID=cds917;Parent=gene958;Dbxref=Genbank:WP_000644685.1;Name=WP_000644685.1;Note=catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues%3B may play a role in recycling muropeptides during cell division and/or cell elongation%3B in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall;gbkey=CDS;gene=mltD;product=murein transglycosylase;protein_id=WP_000644685.1;transl_table=11 NZ_CP010441.1 RefSeq gene 995226 995981 . - . ID=gene959;Name=SH03_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04810;old_locus_tag=SH03_04805 NZ_CP010441.1 Protein Homology CDS 995226 995981 . - 0 ID=cds918;Parent=gene959;Dbxref=Genbank:WP_001052715.1;Name=WP_001052715.1;Note=catalyzes the hydrolysis of S-D-lactoylglutathione to D-lactic acid and reduced glutathione%3B plays an important role in cellular detoxification using glutathione;gbkey=CDS;product=hydroxyacylglutathione hydrolase;protein_id=WP_001052715.1;transl_table=11 NZ_CP010441.1 RefSeq gene 996015 996737 . + . ID=gene960;Name=SH03_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04815;old_locus_tag=SH03_04810 NZ_CP010441.1 Protein Homology CDS 996015 996737 . + 0 ID=cds919;Parent=gene960;Dbxref=Genbank:WP_001326702.1;Name=WP_001326702.1;gbkey=CDS;product=S-adenosyl-L-methionine-dependent methyltransferase;protein_id=WP_001326702.1;transl_table=11 NZ_CP010441.1 RefSeq gene 996734 997201 . - . ID=gene961;Name=SH03_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04820;old_locus_tag=SH03_04815 NZ_CP010441.1 Protein Homology CDS 996734 997201 . - 0 ID=cds920;Parent=gene961;Dbxref=Genbank:WP_000917883.1;Name=WP_000917883.1;gbkey=CDS;product=ribonuclease HI%2C degrades RNA of DNA-RNA hybrids;protein_id=WP_000917883.1;transl_table=11 NZ_CP010441.1 RefSeq gene 997257 997997 . + . ID=gene962;Name=SH03_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04825;old_locus_tag=SH03_04820 NZ_CP010441.1 Protein Homology CDS 997257 997997 . + 0 ID=cds921;Parent=gene962;Dbxref=Genbank:WP_000126265.1;Name=WP_000126265.1;Note=3'-5' exonuclease of DNA polymerase III;gbkey=CDS;product=DNA polymerase III subunit epsilon;protein_id=WP_000126265.1;transl_table=11 NZ_CP010441.1 RefSeq gene 998130 998206 . + . ID=gene963;Name=SH03_RS04830;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS04830;old_locus_tag=SH03_04825 NZ_CP010441.1 tRNAscan-SE tRNA 998130 998206 . + . ID=rna41;Parent=gene963;anticodon=(pos:998164..998166);gbkey=tRNA;product=tRNA-Asp NZ_CP010441.1 tRNAscan-SE exon 998130 998206 . + . ID=id63;Parent=rna41;anticodon=(pos:998164..998166);gbkey=tRNA;product=tRNA-Asp NZ_CP010441.1 RefSeq gene 998534 999319 . + . ID=gene964;Name=SH03_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04835;old_locus_tag=SH03_04830 NZ_CP010441.1 Protein Homology CDS 998534 999319 . + 0 ID=cds922;Parent=gene964;Dbxref=Genbank:WP_001086141.1;Name=WP_001086141.1;gbkey=CDS;product=lipoprotein;protein_id=WP_001086141.1;transl_table=11 NZ_CP010441.1 RefSeq gene 999456 999935 . - . ID=gene965;Name=SH03_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04840;old_locus_tag=SH03_04835 NZ_CP010441.1 Protein Homology CDS 999456 999935 . - 0 ID=cds923;Parent=gene965;Dbxref=Genbank:WP_001236645.1;Name=WP_001236645.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001236645.1;transl_table=11 NZ_CP010441.1 RefSeq gene 999945 1000283 . - . ID=gene966;Name=SH03_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04845;old_locus_tag=SH03_04840 NZ_CP010441.1 Protein Homology CDS 999945 1000283 . - 0 ID=cds924;Parent=gene966;Dbxref=Genbank:WP_000093703.1;Name=WP_000093703.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000093703.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1000297 1000576 . + . ID=id64;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1000335 1000577 . + . ID=gene967;Name=SH03_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04850 NZ_CP010441.1 Protein Homology CDS 1000335 1000577 . + 0 ID=cds925;Parent=gene967;Dbxref=Genbank:WP_042404891.1;Name=WP_042404891.1;gbkey=CDS;product=transposase;protein_id=WP_042404891.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1000618 1001388 . - . ID=gene968;Name=SH03_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04855;old_locus_tag=SH03_04850 NZ_CP010441.1 Protein Homology CDS 1000618 1001388 . - 0 ID=cds926;Parent=gene968;Dbxref=Genbank:WP_001118036.1;Name=WP_001118036.1;Note=NAD(P)-binding;gbkey=CDS;product=hydrolase YafV;protein_id=WP_001118036.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1001569 1002015 . + . ID=gene969;Name=SH03_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04860;old_locus_tag=SH03_04855 NZ_CP010441.1 Protein Homology CDS 1001569 1002015 . + 0 ID=cds927;Parent=gene969;Dbxref=Genbank:WP_001308392.1;Name=WP_001308392.1;Note=inactivates vertebrate C-type lysozyme;gbkey=CDS;product=hypothetical protein;protein_id=WP_001308392.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1002058 1004502 . - . ID=gene970;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=SH03_RS04865;old_locus_tag=SH03_04860 NZ_CP010441.1 Protein Homology CDS 1002058 1004502 . - 0 ID=cds928;Parent=gene970;Dbxref=Genbank:WP_000973083.1;Name=WP_000973083.1;Note=functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA;gbkey=CDS;gene=fadE;product=acyl-CoA dehydrogenase;protein_id=WP_000973083.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1004742 1005320 . + . ID=gene971;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=SH03_RS04870;old_locus_tag=SH03_04865 NZ_CP010441.1 Protein Homology CDS 1004742 1005320 . + 0 ID=cds929;Parent=gene971;Dbxref=Genbank:WP_000284050.1;Name=WP_000284050.1;Note=catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate;gbkey=CDS;gene=gmhA;product=phosphoheptose isomerase;protein_id=WP_000284050.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1005526 1006293 . + . ID=gene972;Name=SH03_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04875;old_locus_tag=SH03_04870 NZ_CP010441.1 Protein Homology CDS 1005526 1006293 . + 0 ID=cds930;Parent=gene972;Dbxref=Genbank:WP_000333380.1;Name=WP_000333380.1;gbkey=CDS;product=glutamine amidotransferase;protein_id=WP_000333380.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1006264 1007004 . - . ID=gene973;Name=SH03_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04880;old_locus_tag=SH03_04875 NZ_CP010441.1 Protein Homology CDS 1006264 1007004 . - 0 ID=cds931;Parent=gene973;Dbxref=Genbank:WP_001225679.1;Name=WP_001225679.1;gbkey=CDS;product=transpeptidase;protein_id=WP_001225679.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1007160 1007438 . - . ID=gene974;Name=SH03_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04885;old_locus_tag=SH03_04880 NZ_CP010441.1 Protein Homology CDS 1007160 1007438 . - 0 ID=cds932;Parent=gene974;Dbxref=Genbank:WP_000615983.1;Name=WP_000615983.1;gbkey=CDS;product=mRNA interferase YafQ;protein_id=WP_000615983.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1007441 1007701 . - . ID=gene975;Name=SH03_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04890;old_locus_tag=SH03_04885 NZ_CP010441.1 Protein Homology CDS 1007441 1007701 . - 0 ID=cds933;Parent=gene975;Dbxref=Genbank:WP_000729703.1;Name=WP_000729703.1;Note=DNA-damage-inducible protein J%3B antitoxin of YafQ-DinJ toxin-antitoxin system;gbkey=CDS;product=antitoxin DinJ;protein_id=WP_000729703.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1007911 1008660 . + . ID=gene976;Name=SH03_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04895;old_locus_tag=SH03_04890 NZ_CP010441.1 Protein Homology CDS 1007911 1008660 . + 0 ID=cds934;Parent=gene976;Dbxref=Genbank:WP_000056849.1;Name=WP_000056849.1;gbkey=CDS;product=endopeptidase;protein_id=WP_000056849.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1008836 1009333 . + . ID=gene977;Name=SH03_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04900;old_locus_tag=SH03_04895 NZ_CP010441.1 Protein Homology CDS 1008836 1009333 . + 0 ID=cds935;Parent=gene977;Dbxref=Genbank:WP_000006255.1;Name=WP_000006255.1;gbkey=CDS;product=transposase;protein_id=WP_000006255.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1009557 1011296 . - . ID=gene978;Name=SH03_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04905;old_locus_tag=SH03_04900 NZ_CP010441.1 Protein Homology CDS 1009557 1011296 . - 0 ID=cds936;Parent=gene978;Dbxref=Genbank:WP_001334802.1;Name=WP_001334802.1;gbkey=CDS;product=flagellar biosynthesis protein FlhA;protein_id=WP_001334802.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1011256 1012026 . + . ID=gene979;Name=SH03_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04910;old_locus_tag=SH03_04905 NZ_CP010441.1 Protein Homology CDS 1011256 1012026 . + 0 ID=cds937;Parent=gene979;Dbxref=Genbank:WP_001333407.1;Name=WP_001333407.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001333407.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1012097 1013152 . + . ID=gene980;Name=SH03_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04915;old_locus_tag=SH03_04910 NZ_CP010441.1 Protein Homology CDS 1012097 1013152 . + 0 ID=cds938;Parent=gene980;Dbxref=Genbank:WP_001226164.1;Name=WP_001226164.1;Note=involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function;gbkey=CDS;product=DNA polymerase IV;protein_id=WP_001226164.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1013204 1013497 . + . ID=gene981;Name=SH03_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04920;old_locus_tag=SH03_04915 NZ_CP010441.1 Protein Homology CDS 1013204 1013497 . + 0 ID=cds939;Parent=gene981;Dbxref=Genbank:WP_000554758.1;Name=WP_000554758.1;gbkey=CDS;product=antitoxin YafN;protein_id=WP_000554758.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1013500 1013898 . + . ID=gene982;Name=SH03_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04925;old_locus_tag=SH03_04920 NZ_CP010441.1 Protein Homology CDS 1013500 1013898 . + 0 ID=cds940;Parent=gene982;Dbxref=Genbank:WP_001263489.1;Name=WP_001263489.1;Note=YafO overproduction induces toxicity%3B it is believed to be the toxin of a toxin-antitoxin pair%3B unknown function;gbkey=CDS;product=mRNA interferase YafO;protein_id=WP_001263489.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1013986 1014360 . + . ID=gene983;Name=SH03_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04930;old_locus_tag=SH03_04925 NZ_CP010441.1 Protein Homology CDS 1013986 1014360 . + 0 ID=cds941;Parent=gene983;Dbxref=Genbank:WP_001310562.1;Name=WP_001310562.1;gbkey=CDS;product=acyltransferase;protein_id=WP_001310562.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1014537 1014665 . + . ID=id65;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1014666 1014932 . + . ID=gene984;Name=SH03_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04935;old_locus_tag=SH03_04930 NZ_CP010441.1 Protein Homology CDS 1014666 1014932 . + 0 ID=cds942;Parent=gene984;Dbxref=Genbank:WP_001295202.1;Name=WP_001295202.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001295202.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1014844 1015401 . + . ID=gene985;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=protein_coding;locus_tag=SH03_RS04940;old_locus_tag=SH03_04935 NZ_CP010441.1 Protein Homology CDS 1014844 1015401 . + 0 ID=cds943;Parent=gene985;Dbxref=Genbank:WP_001352051.1;Name=WP_001352051.1;Note=similar to release factor 1 and 2;gbkey=CDS;gene=prfH;product=peptide chain release factor;protein_id=WP_001352051.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1015458 1016915 . - . ID=gene986;Name=SH03_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04945;old_locus_tag=SH03_04940 NZ_CP010441.1 Protein Homology CDS 1015458 1016915 . - 0 ID=cds944;Parent=gene986;Dbxref=Genbank:WP_001292994.1;Name=WP_001292994.1;Note=catalyzes the hydrolysis of Xaa-His dipeptides;gbkey=CDS;product=cytosol non-specific dipeptidase;protein_id=WP_001292994.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1017176 1017634 . + . ID=gene987;Name=SH03_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04950;old_locus_tag=SH03_04945 NZ_CP010441.1 Protein Homology CDS 1017176 1017634 . + 0 ID=cds945;Parent=gene987;Dbxref=Genbank:WP_001291990.1;Name=WP_001291990.1;Note=catalyzes the conversion of guanine%2C xanthine and%2C to a lesser extent%2C hypoxanthine to GMP%2C XMP and IMP%2C respectively;gbkey=CDS;product=xanthine phosphoribosyltransferase;protein_id=WP_001291990.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1017726 1018970 . + . ID=gene988;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=SH03_RS04955;old_locus_tag=SH03_04950 NZ_CP010441.1 Protein Homology CDS 1017726 1018970 . + 0 ID=cds946;Parent=gene988;Dbxref=Genbank:WP_000189532.1;Name=WP_000189532.1;Note=forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc%3B FrsA may promote fermentation;gbkey=CDS;gene=frsA;product=esterase;protein_id=WP_000189532.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1019028 1019429 . + . ID=gene989;Name=SH03_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04960;old_locus_tag=SH03_04955 NZ_CP010441.1 Protein Homology CDS 1019028 1019429 . + 0 ID=cds947;Parent=gene989;Dbxref=Genbank:WP_000174689.1;Name=WP_000174689.1;Note=involved in the expression of csgBA which is involved in curli formation%3B interacts with sigmaS;gbkey=CDS;product=sigma factor-binding protein Crl;protein_id=WP_000174689.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1019468 1020523 . - . ID=gene990;Name=SH03_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04965;old_locus_tag=SH03_04960 NZ_CP010441.1 Protein Homology CDS 1019468 1020523 . - 0 ID=cds948;Parent=gene990;Dbxref=Genbank:WP_000749863.1;Name=WP_000749863.1;gbkey=CDS;product=outer membrane pore protein E;protein_id=WP_000749863.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1020811 1021914 . + . ID=gene991;Name=SH03_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04970;old_locus_tag=SH03_04965 NZ_CP010441.1 Protein Homology CDS 1020811 1021914 . + 0 ID=cds949;Parent=gene991;Dbxref=Genbank:WP_001285288.1;Name=WP_001285288.1;gbkey=CDS;product=glutamate 5-kinase;protein_id=WP_001285288.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1021926 1023179 . + . ID=gene992;Name=SH03_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04975;old_locus_tag=SH03_04970 NZ_CP010441.1 Protein Homology CDS 1021926 1023179 . + 0 ID=cds950;Parent=gene992;Dbxref=Genbank:WP_000893278.1;Name=WP_000893278.1;gbkey=CDS;product=gamma-glutamyl phosphate reductase;protein_id=WP_000893278.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1023294 1023369 . + . ID=gene993;Name=SH03_RS04980;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS04980;old_locus_tag=SH03_04975 NZ_CP010441.1 tRNAscan-SE tRNA 1023294 1023369 . + . ID=rna42;Parent=gene993;anticodon=(pos:1023327..1023329);gbkey=tRNA;product=tRNA-Thr NZ_CP010441.1 tRNAscan-SE exon 1023294 1023369 . + . ID=id66;Parent=rna42;anticodon=(pos:1023327..1023329);gbkey=tRNA;product=tRNA-Thr NZ_CP010441.1 RefSeq gene 1023751 1024092 . - . ID=gene994;Name=SH03_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04985;old_locus_tag=SH03_04980 NZ_CP010441.1 Protein Homology CDS 1023751 1024092 . - 0 ID=cds951;Parent=gene994;Dbxref=Genbank:WP_000854672.1;Name=WP_000854672.1;gbkey=CDS;product=toxin YkfI;protein_id=WP_000854672.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1024113 1024430 . - . ID=gene995;Name=SH03_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04990;old_locus_tag=SH03_04985 NZ_CP010441.1 Protein Homology CDS 1024113 1024430 . - 0 ID=cds952;Parent=gene995;Dbxref=Genbank:WP_000070395.1;Name=WP_000070395.1;gbkey=CDS;product=antitoxin YafW;protein_id=WP_000070395.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1024679 1025155 . - . ID=gene996;Name=SH03_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS04995;old_locus_tag=SH03_04990 NZ_CP010441.1 Protein Homology CDS 1024679 1025155 . - 0 ID=cds953;Parent=gene996;Dbxref=Genbank:WP_000811693.1;Name=WP_000811693.1;gbkey=CDS;product=UPF0758 protein YkfG;protein_id=WP_000811693.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1025171 1025629 . - . ID=gene997;Name=SH03_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05000;old_locus_tag=SH03_04995 NZ_CP010441.1 Protein Homology CDS 1025171 1025629 . - 0 ID=cds954;Parent=gene997;Dbxref=Genbank:WP_000211838.1;Name=WP_000211838.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000211838.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1025727 1025966 . - . ID=gene998;Name=SH03_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05005;old_locus_tag=SH03_05000 NZ_CP010441.1 Protein Homology CDS 1025727 1025966 . - 0 ID=cds955;Parent=gene998;Dbxref=Genbank:WP_000194654.1;Name=WP_000194654.1;gbkey=CDS;product=UPF0401 protein YkfF;protein_id=WP_000194654.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1026043 1026510 . - . ID=gene999;Name=SH03_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05010;old_locus_tag=SH03_05005 NZ_CP010441.1 Protein Homology CDS 1026043 1026510 . - 0 ID=cds956;Parent=gene999;Dbxref=Genbank:WP_001547765.1;Name=WP_001547765.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001547765.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1026533 1026976 . - . ID=gene1000;Name=SH03_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05015;old_locus_tag=SH03_05010 NZ_CP010441.1 Protein Homology CDS 1026533 1026976 . - 0 ID=cds957;Parent=gene1000;Dbxref=Genbank:WP_000824223.1;Name=WP_000824223.1;gbkey=CDS;product=lipoprotein%2C inner membrane%3B degP regulator%3B CP4-6 prophage;protein_id=WP_000824223.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1026976 1027215 . - . ID=gene1001;Name=SH03_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05020;old_locus_tag=SH03_05015 NZ_CP010441.1 Protein Homology CDS 1026976 1027215 . - 0 ID=cds958;Parent=gene1001;Dbxref=Genbank:WP_032243554.1;Name=WP_032243554.1;gbkey=CDS;product=membrane protein;protein_id=WP_032243554.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1027607 1028428 . - . ID=gene1002;Name=SH03_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05025;old_locus_tag=SH03_05020 NZ_CP010441.1 Protein Homology CDS 1027607 1028428 . - 0 ID=cds959;Parent=gene1002;Dbxref=Genbank:WP_000197389.1;Name=WP_000197389.1;gbkey=CDS;product=UPF0380 protein YafZ;protein_id=WP_000197389.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1028520 1029383 . - . ID=gene1003;Name=SH03_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05030;old_locus_tag=SH03_05025 NZ_CP010441.1 Protein Homology CDS 1028520 1029383 . - 0 ID=cds960;Parent=gene1003;Dbxref=Genbank:WP_001065553.1;Name=WP_001065553.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001065553.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1029712 1030605 . - . ID=gene1004;Name=SH03_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05035;old_locus_tag=SH03_05030 NZ_CP010441.1 Protein Homology CDS 1029712 1030605 . - 0 ID=cds961;Parent=gene1004;Dbxref=Genbank:WP_000770246.1;Name=WP_000770246.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000770246.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1030701 1031069 . + . ID=gene1005;Name=SH03_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05040;old_locus_tag=SH03_05035 NZ_CP010441.1 Protein Homology CDS 1030701 1031069 . + 0 ID=cds962;Parent=gene1005;Dbxref=Genbank:WP_000747092.1;Name=WP_000747092.1;gbkey=CDS;product=transposase;protein_id=WP_000747092.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1030947 1032184 . + . ID=id67;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1031026 1032177 . + . ID=gene1006;Name=SH03_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05045;old_locus_tag=SH03_05040 NZ_CP010441.1 Protein Homology CDS 1031026 1032177 . + 0 ID=cds963;Parent=gene1006;Dbxref=Genbank:WP_001254938.1;Name=WP_001254938.1;gbkey=CDS;product=transposase;protein_id=WP_001254938.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1032253 1032678 . + . ID=gene1007;Name=SH03_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05050;old_locus_tag=SH03_05045 NZ_CP010441.1 Protein Homology CDS 1032253 1032678 . + 0 ID=cds964;Parent=gene1007;Dbxref=Genbank:WP_000212151.1;Name=WP_000212151.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_000212151.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1032608 1032976 . - . ID=gene1008;Name=SH03_RS05055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS05055;partial=true;pseudo=true;start_range=.,1032608 NZ_CP010441.1 Protein Homology CDS 1032608 1032976 . - 0 ID=cds965;Parent=gene1008;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1032608;transl_table=11 NZ_CP010441.1 RefSeq gene 1032891 1033316 . - . ID=gene1009;Name=SH03_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05060;old_locus_tag=SH03_05055 NZ_CP010441.1 Protein Homology CDS 1032891 1033316 . - 0 ID=cds966;Parent=gene1009;Dbxref=Genbank:WP_001323220.1;Name=WP_001323220.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001323220.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1033285 1034414 . + . ID=gene1010;Name=SH03_RS05065;end_range=1034414,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS05065;partial=true;pseudo=true NZ_CP010441.1 Protein Homology CDS 1033285 1034414 . + 0 ID=cds967;Parent=gene1010;end_range=1034414,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1034371 1035572 . + . ID=id68;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1034524 1035504 . - . ID=gene1011;Name=SH03_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05070;old_locus_tag=SH03_05065 NZ_CP010441.1 Protein Homology CDS 1034524 1035504 . - 0 ID=cds968;Parent=gene1011;Dbxref=Genbank:WP_000019403.1;Name=WP_000019403.1;gbkey=CDS;product=transposase;protein_id=WP_000019403.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1035748 1037151 . + . ID=gene1012;Name=SH03_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05075;old_locus_tag=SH03_05070 NZ_CP010441.1 Protein Homology CDS 1035748 1037151 . + 0 ID=cds969;Parent=gene1012;Dbxref=Genbank:WP_001393629.1;Name=WP_001393629.1;gbkey=CDS;product=S-methylmethionine permease;protein_id=WP_001393629.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1037138 1038070 . + . ID=gene1013;Name=SH03_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05080;old_locus_tag=SH03_05075 NZ_CP010441.1 Protein Homology CDS 1037138 1038070 . + 0 ID=cds970;Parent=gene1013;Dbxref=Genbank:WP_000081352.1;Name=WP_000081352.1;gbkey=CDS;product=homocysteine S-methyltransferase;protein_id=WP_000081352.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1038179 1039225 . - . ID=gene1014;Name=fbpC;gbkey=Gene;gene=fbpC;gene_biotype=protein_coding;locus_tag=SH03_RS05085;old_locus_tag=SH03_05080 NZ_CP010441.1 Protein Homology CDS 1038179 1039225 . - 0 ID=cds971;Parent=gene1014;Dbxref=Genbank:WP_000192349.1;Name=WP_000192349.1;Note=Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import;gbkey=CDS;gene=fbpC;product=Fe(3+) ions import ATP-binding protein FbpC;protein_id=WP_000192349.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1039237 1039599 . - . ID=gene1015;Name=SH03_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05090;old_locus_tag=SH03_05085 NZ_CP010441.1 GeneMarkS+ CDS 1039237 1039599 . - 0 ID=cds972;Parent=gene1015;Dbxref=Genbank:WP_001295711.1;Name=WP_001295711.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_001295711.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1039583 1040535 . + . ID=id69;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1039601 1040104 . - . ID=gene1016;Name=SH03_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05095;old_locus_tag=SH03_05090 NZ_CP010441.1 Protein Homology CDS 1039601 1040104 . - 0 ID=cds973;Parent=gene1016;Dbxref=Genbank:WP_001119292.1;Name=WP_001119292.1;gbkey=CDS;product=transposase;protein_id=WP_001119292.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1040023 1040298 . - . ID=gene1017;Name=SH03_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05100;old_locus_tag=SH03_05095 NZ_CP010441.1 Protein Homology CDS 1040023 1040298 . - 0 ID=cds974;Parent=gene1017;Dbxref=Genbank:WP_000179210.1;Name=WP_000179210.1;gbkey=CDS;product=repressor TnpA;protein_id=WP_000179210.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1040447 1040785 . - . ID=gene1018;Name=SH03_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05105;old_locus_tag=SH03_05100 NZ_CP010441.1 Protein Homology CDS 1040447 1040785 . - 0 ID=cds975;Parent=gene1018;Dbxref=Genbank:WP_000015532.1;Name=WP_000015532.1;gbkey=CDS;product=transposase;protein_id=WP_000015532.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1040808 1041158 . - . ID=gene1019;Name=SH03_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05110;old_locus_tag=SH03_05105 NZ_CP010441.1 Protein Homology CDS 1040808 1041158 . - 0 ID=cds976;Parent=gene1019;Dbxref=Genbank:WP_001030800.1;Name=WP_001030800.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001030800.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1041252 1042394 . - . ID=gene1020;Name=SH03_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05115;old_locus_tag=SH03_05110 NZ_CP010441.1 Protein Homology CDS 1041252 1042394 . - 0 ID=cds977;Parent=gene1020;Dbxref=Genbank:WP_001350483.1;Name=WP_001350483.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001350483.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1042701 1043609 . + . ID=gene1021;Name=SH03_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05120;old_locus_tag=SH03_05115 NZ_CP010441.1 Protein Homology CDS 1042701 1043609 . + 0 ID=cds978;Parent=gene1021;Dbxref=Genbank:WP_001136613.1;Name=WP_001136613.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001136613.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1043624 1045591 . + . ID=gene1022;Name=SH03_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05125;old_locus_tag=SH03_05120 NZ_CP010441.1 Protein Homology CDS 1043624 1045591 . + 0 ID=cds979;Parent=gene1022;Dbxref=Genbank:WP_000151261.1;Name=WP_000151261.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000151261.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1045818 1047200 . + . ID=gene1023;Name=SH03_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05130;old_locus_tag=SH03_05125 NZ_CP010441.1 Protein Homology CDS 1045818 1047200 . + 0 ID=cds980;Parent=gene1023;Dbxref=Genbank:WP_000192863.1;Name=WP_000192863.1;Note=uncharacterized member of the GPH family of galactose-pentose-hexuronide transporters;gbkey=CDS;product=hypothetical protein;protein_id=WP_000192863.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1047212 1048822 . + . ID=gene1024;Name=SH03_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05135;old_locus_tag=SH03_05130 NZ_CP010441.1 Protein Homology CDS 1047212 1048822 . + 0 ID=cds981;Parent=gene1024;Dbxref=Genbank:WP_000406871.1;Name=WP_000406871.1;gbkey=CDS;product=arabinosidase;protein_id=WP_000406871.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1048827 1049585 . - . ID=gene1025;Name=SH03_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05140;old_locus_tag=SH03_05135 NZ_CP010441.1 Protein Homology CDS 1048827 1049585 . - 0 ID=cds982;Parent=gene1025;Dbxref=Genbank:WP_001121657.1;Name=WP_001121657.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001121657.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1049724 1050728 . - . ID=gene1026;Name=SH03_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05145;old_locus_tag=SH03_05140 NZ_CP010441.1 Protein Homology CDS 1049724 1050728 . - 0 ID=cds983;Parent=gene1026;Dbxref=Genbank:WP_001281825.1;Name=WP_001281825.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;gbkey=CDS;product=ornithine carbamoyltransferase chain F;protein_id=WP_001281825.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1050851 1051826 . + . ID=id70;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1051072 1051575 . - . ID=gene1027;Name=SH03_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05150;old_locus_tag=SH03_05145 NZ_CP010441.1 Protein Homology CDS 1051072 1051575 . - 0 ID=cds984;Parent=gene1027;Dbxref=Genbank:WP_001119292.1;Name=WP_001119292.1;gbkey=CDS;product=transposase;protein_id=WP_001119292.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1051923 1052654 . + . ID=gene1028;Name=SH03_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05155;old_locus_tag=SH03_05150 NZ_CP010441.1 Protein Homology CDS 1051923 1052654 . + 0 ID=cds985;Parent=gene1028;Dbxref=Genbank:WP_000388269.1;Name=WP_000388269.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000388269.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1052745 1053371 . - . ID=gene1029;Name=SH03_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05160;old_locus_tag=SH03_05155 NZ_CP010441.1 Protein Homology CDS 1052745 1053371 . - 0 ID=cds986;Parent=gene1029;Dbxref=Genbank:WP_000860996.1;Name=WP_000860996.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000860996.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1053643 1054341 . - . ID=gene1030;Name=SH03_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05165;old_locus_tag=SH03_05160 NZ_CP010441.1 Protein Homology CDS 1053643 1054341 . - 0 ID=cds987;Parent=gene1030;Dbxref=Genbank:WP_001214248.1;Name=WP_001214248.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001214248.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1054368 1055222 . - . ID=gene1031;Name=SH03_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05170;old_locus_tag=SH03_05165 NZ_CP010441.1 Protein Homology CDS 1054368 1055222 . - 0 ID=cds988;Parent=gene1031;Dbxref=Genbank:WP_000072039.1;Name=WP_000072039.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000072039.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1055341 1055565 . - . ID=gene1032;Name=SH03_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05175;old_locus_tag=SH03_05170 NZ_CP010441.1 Protein Homology CDS 1055341 1055565 . - 0 ID=cds989;Parent=gene1032;Dbxref=Genbank:WP_001272156.1;Name=WP_001272156.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001272156.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1055562 1056002 . - . ID=gene1033;Name=SH03_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05180;old_locus_tag=SH03_05175 NZ_CP010441.1 Protein Homology CDS 1055562 1056002 . - 0 ID=cds990;Parent=gene1033;Dbxref=Genbank:WP_000224818.1;Name=WP_000224818.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000224818.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1056119 1057444 . - . ID=gene1034;Name=SH03_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05185;old_locus_tag=SH03_05180 NZ_CP010441.1 Protein Homology CDS 1056119 1057444 . - 0 ID=cds991;Parent=gene1034;Dbxref=Genbank:WP_001218563.1;Name=WP_001218563.1;gbkey=CDS;product=preprotein translocase;protein_id=WP_001218563.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1057601 1057677 . + . ID=gene1035;Name=SH03_RS05190;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS05190;old_locus_tag=SH03_05185 NZ_CP010441.1 tRNAscan-SE tRNA 1057601 1057677 . + . ID=rna43;Parent=gene1035;anticodon=(pos:1057635..1057637);gbkey=tRNA;product=tRNA-Thr NZ_CP010441.1 tRNAscan-SE exon 1057601 1057677 . + . ID=id71;Parent=rna43;anticodon=(pos:1057635..1057637);gbkey=tRNA;product=tRNA-Thr NZ_CP010441.1 RefSeq gene 1057804 1058214 . - . ID=gene1036;Name=SH03_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05195;old_locus_tag=SH03_05190 NZ_CP010441.1 Protein Homology CDS 1057804 1058214 . - 0 ID=cds992;Parent=gene1036;Dbxref=Genbank:WP_001111342.1;Name=WP_001111342.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001111342.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1058193 1059149 . - . ID=gene1037;Name=SH03_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05200;old_locus_tag=SH03_05195 NZ_CP010441.1 Protein Homology CDS 1058193 1059149 . - 0 ID=cds993;Parent=gene1037;Dbxref=Genbank:WP_000121359.1;Name=WP_000121359.1;gbkey=CDS;product=moco insertion factor for PaoABC aldehyde oxidoreductase;protein_id=WP_000121359.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1059159 1061357 . - . ID=gene1038;Name=SH03_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05205;old_locus_tag=SH03_05200 NZ_CP010441.1 Protein Homology CDS 1059159 1061357 . - 0 ID=cds994;Parent=gene1038;Dbxref=Genbank:WP_000667026.1;Name=WP_000667026.1;gbkey=CDS;product=PaoABC aldehyde oxidoreductase Moco-containing subunit;protein_id=WP_000667026.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1061354 1062310 . - . ID=gene1039;Name=SH03_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05210;old_locus_tag=SH03_05205 NZ_CP010441.1 Protein Homology CDS 1061354 1062310 . - 0 ID=cds995;Parent=gene1039;Dbxref=Genbank:WP_000643333.1;Name=WP_000643333.1;gbkey=CDS;product=PaoABC aldehyde oxidoreductase FAD-containing subunit;protein_id=WP_000643333.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1062307 1062996 . - . ID=gene1040;Name=SH03_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05215;old_locus_tag=SH03_05210 NZ_CP010441.1 Protein Homology CDS 1062307 1062996 . - 0 ID=cds996;Parent=gene1040;Dbxref=Genbank:WP_000070700.1;Name=WP_000070700.1;gbkey=CDS;product=PaoABC aldehyde oxidoreductase 2Fe-2S subunit;protein_id=WP_000070700.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1063414 1064028 . + . ID=gene1041;Name=SH03_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05220;old_locus_tag=SH03_05215 NZ_CP010441.1 Protein Homology CDS 1063414 1064028 . + 0 ID=cds997;Parent=gene1041;Dbxref=Genbank:WP_001019920.1;Name=WP_001019920.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001019920.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1064276 1064605 . - . ID=gene1042;Name=SH03_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05225;old_locus_tag=SH03_05220 NZ_CP010441.1 Protein Homology CDS 1064276 1064605 . - 0 ID=cds998;Parent=gene1042;Dbxref=Genbank:WP_001303809.1;Name=WP_001303809.1;gbkey=CDS;product=ferredoxin;protein_id=WP_001303809.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1064918 1065628 . - . ID=gene1043;Name=SH03_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05230;old_locus_tag=SH03_05225 NZ_CP010441.1 Protein Homology CDS 1064918 1065628 . - 0 ID=cds999;Parent=gene1043;Dbxref=Genbank:WP_001350485.1;Name=WP_001350485.1;gbkey=CDS;product=fimbrial chaperone EcpE;protein_id=WP_001350485.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1065597 1067240 . - . ID=gene1044;Name=SH03_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05235;old_locus_tag=SH03_05230 NZ_CP010441.1 Protein Homology CDS 1065597 1067240 . - 0 ID=cds1000;Parent=gene1044;Dbxref=Genbank:WP_001310578.1;Name=WP_001310578.1;gbkey=CDS;product=fimbria adhesin EcpD;protein_id=WP_001310578.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1067230 1069755 . - . ID=gene1045;Name=SH03_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05240;old_locus_tag=SH03_05235 NZ_CP010441.1 Protein Homology CDS 1067230 1069755 . - 0 ID=cds1001;Parent=gene1045;Dbxref=Genbank:WP_001131096.1;Name=WP_001131096.1;gbkey=CDS;product=usher protein EcpC;protein_id=WP_001131096.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1069781 1070449 . - . ID=gene1046;Name=SH03_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05245;old_locus_tag=SH03_05240 NZ_CP010441.1 Protein Homology CDS 1069781 1070449 . - 0 ID=cds1002;Parent=gene1046;Dbxref=Genbank:WP_000716398.1;Name=WP_000716398.1;gbkey=CDS;product=fimbrial chaperone EcpB;protein_id=WP_000716398.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1070507 1071094 . - . ID=gene1047;Name=SH03_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05250;old_locus_tag=SH03_05245 NZ_CP010441.1 Protein Homology CDS 1070507 1071094 . - 0 ID=cds1003;Parent=gene1047;Dbxref=Genbank:WP_000730972.1;Name=WP_000730972.1;gbkey=CDS;product=common pilus major fimbrillin subunit EcpA;protein_id=WP_000730972.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1071169 1071711 . - . ID=gene1048;Name=SH03_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05255;old_locus_tag=SH03_05250 NZ_CP010441.1 Protein Homology CDS 1071169 1071711 . - 0 ID=cds1004;Parent=gene1048;Dbxref=Genbank:WP_001301257.1;Name=WP_001301257.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_001301257.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1072535 1072762 . + . ID=gene1049;Name=SH03_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05260;old_locus_tag=SH03_05255 NZ_CP010441.1 Protein Homology CDS 1072535 1072762 . + 0 ID=cds1005;Parent=gene1049;Dbxref=Genbank:WP_001147279.1;Name=WP_001147279.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001147279.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1072797 1072937 . - . ID=gene1050;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=SH03_RS05265;old_locus_tag=SH03_05260 NZ_CP010441.1 Protein Homology CDS 1072797 1072937 . - 0 ID=cds1006;Parent=gene1050;Dbxref=Genbank:WP_000866436.1;Name=WP_000866436.1;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group do not have the motif;gbkey=CDS;gene=rpmJ;product=50S ribosomal protein L36;protein_id=WP_000866436.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1072937 1073200 . - . ID=gene1051;Name=SH03_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05270;old_locus_tag=SH03_05265 NZ_CP010441.1 Protein Homology CDS 1072937 1073200 . - 0 ID=cds1007;Parent=gene1051;Dbxref=Genbank:WP_000803998.1;Name=WP_000803998.1;gbkey=CDS;product=50S ribosomal protein L31 type B;protein_id=WP_000803998.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1073564 1073665 . - . ID=gene1052;Name=SH03_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05275;old_locus_tag=SH03_05270 NZ_CP010441.1 Protein Homology CDS 1073564 1073665 . - 0 ID=cds1008;Parent=gene1052;Dbxref=Genbank:WP_000662258.1;Name=WP_000662258.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000662258.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1074780 1075667 . + . ID=gene1053;Name=SH03_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05280;old_locus_tag=SH03_05275 NZ_CP010441.1 Protein Homology CDS 1074780 1075667 . + 0 ID=cds1009;Parent=gene1053;Dbxref=Genbank:WP_000020224.1;Name=WP_000020224.1;gbkey=CDS;product=attachment protein;protein_id=WP_000020224.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1075652 1076906 . + . ID=id72;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1075714 1076013 . + . ID=gene1054;Name=SH03_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05285;old_locus_tag=SH03_05280 NZ_CP010441.1 Protein Homology CDS 1075714 1076013 . + 0 ID=cds1010;Parent=gene1054;Dbxref=Genbank:WP_000169527.1;Name=WP_000169527.1;gbkey=CDS;product=transposase;protein_id=WP_000169527.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1076010 1076876 . + . ID=gene1055;Name=SH03_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05290;old_locus_tag=SH03_05285 NZ_CP010441.1 Protein Homology CDS 1076010 1076876 . + 0 ID=cds1011;Parent=gene1055;Dbxref=Genbank:WP_000878218.1;Name=WP_000878218.1;gbkey=CDS;product=transposase;protein_id=WP_000878218.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1076873 1077559 . - . ID=gene1056;Name=SH03_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05295;old_locus_tag=SH03_05290 NZ_CP010441.1 Protein Homology CDS 1076873 1077559 . - 0 ID=cds1012;Parent=gene1056;Dbxref=Genbank:WP_000621011.1;Name=WP_000621011.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000621011.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1078149 1078742 . - . ID=gene1057;Name=SH03_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05300;old_locus_tag=SH03_05295 NZ_CP010441.1 Protein Homology CDS 1078149 1078742 . - 0 ID=cds1013;Parent=gene1057;Dbxref=Genbank:WP_001299021.1;Name=WP_001299021.1;gbkey=CDS;product=protein RclC;protein_id=WP_001299021.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1078754 1078990 . - . ID=gene1058;Name=SH03_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05305;old_locus_tag=SH03_05300 NZ_CP010441.1 Protein Homology CDS 1078754 1078990 . - 0 ID=cds1014;Parent=gene1058;Dbxref=Genbank:WP_000474084.1;Name=WP_000474084.1;gbkey=CDS;product=reactive chlorine species (RCS) stress resistance periplasmic protein;protein_id=WP_000474084.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1079099 1080424 . - . ID=gene1059;Name=SH03_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05310;old_locus_tag=SH03_05305 NZ_CP010441.1 Protein Homology CDS 1079099 1080424 . - 0 ID=cds1015;Parent=gene1059;Dbxref=Genbank:WP_001046307.1;Name=WP_001046307.1;Note=Involved in disulfide oxidoreductase activity and electron transport;gbkey=CDS;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=WP_001046307.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1080650 1081504 . + . ID=gene1060;Name=SH03_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05315;old_locus_tag=SH03_05310 NZ_CP010441.1 Protein Homology CDS 1080650 1081504 . + 0 ID=cds1016;Parent=gene1060;Dbxref=Genbank:WP_000339594.1;Name=WP_000339594.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000339594.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1082031 1082750 . + . ID=gene1061;Name=SH03_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05320;old_locus_tag=SH03_05315 NZ_CP010441.1 Protein Homology CDS 1082031 1082750 . + 0 ID=cds1017;Parent=gene1061;Dbxref=Genbank:WP_001102108.1;Name=WP_001102108.1;gbkey=CDS;product=cysteine-rich LutA family protein%3B electron transport chain YkgEFG component;protein_id=WP_001102108.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1082761 1084188 . + . ID=gene1062;Name=SH03_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05325;old_locus_tag=SH03_05320 NZ_CP010441.1 Protein Homology CDS 1082761 1084188 . + 0 ID=cds1018;Parent=gene1062;Dbxref=Genbank:WP_000023927.1;Name=WP_000023927.1;gbkey=CDS;product=ferridoxin-like LutB family protein%3B electron transport chain YkgEFG component;protein_id=WP_000023927.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1084181 1084876 . + . ID=gene1063;Name=SH03_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05330;old_locus_tag=SH03_05325 NZ_CP010441.1 Protein Homology CDS 1084181 1084876 . + 0 ID=cds1019;Parent=gene1063;Dbxref=Genbank:WP_000370307.1;Name=WP_000370307.1;gbkey=CDS;product=LutC family protein%3B electron transport chain YkgEFG component;protein_id=WP_000370307.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1084950 1085072 . - . ID=gene1064;Name=SH03_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05335;old_locus_tag=SH03_05330 NZ_CP010441.1 Protein Homology CDS 1084950 1085072 . - 0 ID=cds1020;Parent=gene1064;Dbxref=Genbank:WP_001301262.1;Name=WP_001301262.1;gbkey=CDS;product=universal stress protein;protein_id=WP_001301262.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1085119 1085787 . - . ID=gene1065;Name=SH03_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05340;old_locus_tag=SH03_05335 NZ_CP010441.1 Protein Homology CDS 1085119 1085787 . - 0 ID=cds1021;Parent=gene1065;Dbxref=Genbank:WP_001209100.1;Name=WP_001209100.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001209100.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1086000 1087670 . - . ID=gene1066;Name=SH03_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05345;old_locus_tag=SH03_05340 NZ_CP010441.1 Protein Homology CDS 1086000 1087670 . - 0 ID=cds1022;Parent=gene1066;Dbxref=Genbank:WP_001159094.1;Name=WP_001159094.1;Note=catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine;gbkey=CDS;product=oxygen-dependent choline dehydrogenase;protein_id=WP_001159094.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1087684 1089156 . - . ID=gene1067;Name=SH03_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05350;old_locus_tag=SH03_05345 NZ_CP010441.1 Protein Homology CDS 1087684 1089156 . - 0 ID=cds1023;Parent=gene1067;Dbxref=Genbank:WP_000089110.1;Name=WP_000089110.1;gbkey=CDS;product=NAD/NADP-dependent betaine aldehyde dehydrogenase;protein_id=WP_000089110.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1089170 1089757 . - . ID=gene1068;Name=SH03_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05355;old_locus_tag=SH03_05350 NZ_CP010441.1 Protein Homology CDS 1089170 1089757 . - 0 ID=cds1024;Parent=gene1068;Dbxref=Genbank:WP_001335745.1;Name=WP_001335745.1;Note=HTH-type%3B bet1%3B Repressor involved in choline regulation of the bet genes;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001335745.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1089886 1091919 . + . ID=gene1069;Name=SH03_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05360;old_locus_tag=SH03_05355 NZ_CP010441.1 Protein Homology CDS 1089886 1091919 . + 0 ID=cds1025;Parent=gene1069;Dbxref=Genbank:WP_000131044.1;Name=WP_000131044.1;Note=proton-motive-force-driven choline transporter;gbkey=CDS;product=choline transporter;protein_id=WP_000131044.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1092289 1092474 . - . ID=gene1070;Name=SH03_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05365;old_locus_tag=SH03_05360 NZ_CP010441.1 Protein Homology CDS 1092289 1092474 . - 0 ID=cds1026;Parent=gene1070;Dbxref=Genbank:WP_001323767.1;Name=WP_001323767.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001323767.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1092794 1093882 . + . ID=gene1071;Name=SH03_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05370;old_locus_tag=SH03_05365 NZ_CP010441.1 Protein Homology CDS 1092794 1093882 . + 0 ID=cds1027;Parent=gene1071;Dbxref=Genbank:WP_001301264.1;Name=WP_001301264.1;gbkey=CDS;product=cyclic di-GMP phosphodiesterase YahA;protein_id=WP_001301264.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1093924 1094856 . - . ID=gene1072;Name=SH03_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05375;old_locus_tag=SH03_05370 NZ_CP010441.1 Protein Homology CDS 1093924 1094856 . - 0 ID=cds1028;Parent=gene1072;Dbxref=Genbank:WP_001084394.1;Name=WP_001084394.1;gbkey=CDS;product=DNA-bindng transcriptional regulator;protein_id=WP_001084394.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1094948 1095445 . - . ID=gene1073;Name=SH03_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05380;old_locus_tag=SH03_05375 NZ_CP010441.1 Protein Homology CDS 1094948 1095445 . - 0 ID=cds1029;Parent=gene1073;Dbxref=Genbank:WP_001013892.1;Name=WP_001013892.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001013892.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1095703 1096308 . + . ID=gene1074;Name=SH03_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05385;old_locus_tag=SH03_05380 NZ_CP010441.1 Protein Homology CDS 1095703 1096308 . + 0 ID=cds1030;Parent=gene1074;Dbxref=Genbank:WP_000023635.1;Name=WP_000023635.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000023635.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1096348 1097211 . + . ID=gene1075;Name=SH03_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05390;old_locus_tag=SH03_05385 NZ_CP010441.1 Protein Homology CDS 1096348 1097211 . + 0 ID=cds1031;Parent=gene1075;Dbxref=Genbank:WP_001310582.1;Name=WP_001310582.1;gbkey=CDS;product=DUF2877 domain-containing protein;protein_id=WP_001310582.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1097201 1098748 . + . ID=gene1076;Name=SH03_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05395;old_locus_tag=SH03_05390 NZ_CP010441.1 Protein Homology CDS 1097201 1098748 . + 0 ID=cds1032;Parent=gene1076;Dbxref=Genbank:WP_000111836.1;Name=WP_000111836.1;gbkey=CDS;product=NAD(P)-binding succinyl-CoA synthase;protein_id=WP_000111836.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1098748 1100166 . + . ID=gene1077;Name=SH03_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05400;old_locus_tag=SH03_05395 NZ_CP010441.1 Protein Homology CDS 1098748 1100166 . + 0 ID=cds1033;Parent=gene1077;Dbxref=Genbank:WP_000083429.1;Name=WP_000083429.1;gbkey=CDS;product=DUF1116 domain-containing protein;protein_id=WP_000083429.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1100138 1100419 . + . ID=gene1078;Name=SH03_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05405 NZ_CP010441.1 Protein Homology CDS 1100138 1100419 . + 0 ID=cds1034;Parent=gene1078;Dbxref=Genbank:WP_046377548.1;Name=WP_046377548.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_046377548.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1100179 1100445 . + . ID=id73;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1100495 1101445 . + . ID=gene1079;Name=SH03_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05410;old_locus_tag=SH03_05405 NZ_CP010441.1 Protein Homology CDS 1100495 1101445 . + 0 ID=cds1035;Parent=gene1079;Dbxref=Genbank:WP_000661672.1;Name=WP_000661672.1;gbkey=CDS;product=carbamate kinase-like protein YahI;protein_id=WP_000661672.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1101455 1102837 . + . ID=gene1080;Name=SH03_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05415;old_locus_tag=SH03_05410 NZ_CP010441.1 Protein Homology CDS 1101455 1102837 . + 0 ID=cds1036;Parent=gene1080;Dbxref=Genbank:WP_000665120.1;Name=WP_000665120.1;Note=metallo-dependent hydrolase superfamily%3B deaminase with metallo-dependent hydrolase domain;gbkey=CDS;product=metallo-dependent hydrolase domain deaminase;protein_id=WP_000665120.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1103214 1104263 . + . ID=gene1081;Name=SH03_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05420;old_locus_tag=SH03_05415 NZ_CP010441.1 Protein Homology CDS 1103214 1104263 . + 0 ID=cds1037;Parent=gene1081;Dbxref=Genbank:WP_000692754.1;Name=WP_000692754.1;gbkey=CDS;product=aldehyde reductase YahK;protein_id=WP_000692754.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1104506 1105321 . + . ID=gene1082;Name=SH03_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05425;old_locus_tag=SH03_05420 NZ_CP010441.1 Protein Homology CDS 1104506 1105321 . + 0 ID=cds1038;Parent=gene1082;Dbxref=Genbank:WP_001301260.1;Name=WP_001301260.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001301260.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1105734 1105979 . + . ID=gene1083;Name=SH03_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05430;old_locus_tag=SH03_05425 NZ_CP010441.1 Protein Homology CDS 1105734 1105979 . + 0 ID=cds1039;Parent=gene1083;Dbxref=Genbank:WP_000290616.1;Name=WP_000290616.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000290616.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1105996 1106628 . - . ID=gene1084;Name=SH03_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05435;old_locus_tag=SH03_05430 NZ_CP010441.1 Protein Homology CDS 1105996 1106628 . - 0 ID=cds1040;Parent=gene1084;Dbxref=Genbank:WP_001299549.1;Name=WP_001299549.1;gbkey=CDS;product=membrane protein;protein_id=WP_001299549.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1106814 1107089 . + . ID=gene1085;Name=SH03_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05440;old_locus_tag=SH03_05435 NZ_CP010441.1 Protein Homology CDS 1106814 1107089 . + 0 ID=cds1041;Parent=gene1085;Dbxref=Genbank:WP_000691956.1;Name=WP_000691956.1;gbkey=CDS;product=periplasmic protein%2C function unknown%2C YhcN family;protein_id=WP_000691956.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1107187 1108773 . - . ID=gene1086;Name=SH03_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05445;old_locus_tag=SH03_05440 NZ_CP010441.1 Protein Homology CDS 1107187 1108773 . - 0 ID=cds1042;Parent=gene1086;Dbxref=Genbank:WP_000941041.1;Name=WP_000941041.1;Note=sigma-54 dependent activator family protein%3B activates the prpBCDE operon;gbkey=CDS;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_000941041.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1109012 1109902 . + . ID=gene1087;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=SH03_RS05450;old_locus_tag=SH03_05445 NZ_CP010441.1 Protein Homology CDS 1109012 1109902 . + 0 ID=cds1043;Parent=gene1087;Dbxref=Genbank:WP_000052206.1;Name=WP_000052206.1;Note=catalyzes the formation of pyruvate and succinate from 2-methylisocitrate;gbkey=CDS;gene=prpB;product=methylisocitrate lyase;protein_id=WP_000052206.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1109930 1110302 . + . ID=id74;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1110342 1111511 . + . ID=gene1088;Name=SH03_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05455;old_locus_tag=SH03_05450 NZ_CP010441.1 Protein Homology CDS 1110342 1111511 . + 0 ID=cds1044;Parent=gene1088;Dbxref=Genbank:WP_001285927.1;Name=WP_001285927.1;Note=catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate%3B also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity;gbkey=CDS;product=2-methylcitrate synthase;protein_id=WP_001285927.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1111545 1112996 . + . ID=gene1089;Name=prpD;gbkey=Gene;gene=prpD;gene_biotype=pseudogene;gene_synonym=mmgE;locus_tag=SH03_RS05460;pseudo=true NZ_CP010441.1 Protein Homology CDS 1111545 1112996 . + 0 ID=cds1045;Parent=gene1089;Note=functions in propionate metabolism%3B involved in isomerization of (2S%2C3S)-methylcitrate to (2R%2C3S)-methylisocitrate%3B also encodes minor aconitase or dehydratase activity%3B aconitase C;gbkey=CDS;gene=prpD;product=2-methylcitrate dehydratase;pseudo=true;transl_except=(pos:1112796..1112798%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq gene 1113036 1114922 . + . ID=gene1090;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;gene_synonym=yahU;locus_tag=SH03_RS05465;old_locus_tag=SH03_05460 NZ_CP010441.1 Protein Homology CDS 1113036 1114922 . + 0 ID=cds1046;Parent=gene1090;Dbxref=Genbank:WP_000010288.1;Name=WP_000010288.1;Note=catalyzes the formation of propionyl-CoA using propionate as a substrate%3B PrpE from Ralstonia solanacearum can produce acetyl-%2C propionyl-%2C butyryl- and acrylyl-coenzyme A%2C and Salmonella enterica produces propionyl- and butyryl-coenzyme A%3B not expressed in Escherichia coli when grown on propionate/minimal media%3B ATP-dependent;gbkey=CDS;gene=prpE;product=propionate--CoA ligase;protein_id=WP_000010288.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1115252 1116511 . + . ID=gene1091;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=SH03_RS05470;old_locus_tag=SH03_05465 NZ_CP010441.1 Protein Homology CDS 1115252 1116511 . + 0 ID=cds1047;Parent=gene1091;Dbxref=Genbank:WP_000076233.1;Name=WP_000076233.1;gbkey=CDS;gene=codB;product=cytosine permease;protein_id=WP_000076233.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1116501 1117784 . + . ID=gene1092;Name=SH03_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05475;old_locus_tag=SH03_05470 NZ_CP010441.1 Protein Homology CDS 1116501 1117784 . + 0 ID=cds1048;Parent=gene1092;Dbxref=Genbank:WP_001301240.1;Name=WP_001301240.1;Note=Catalyzes the deamination of cytosine to uracil and ammonia;gbkey=CDS;product=cytosine deaminase;protein_id=WP_001301240.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1117806 1118004 . + . ID=id75;gbkey=repeat_region NZ_CP010441.1 RefSeq repeat_region 1118006 1118204 . + . ID=id76;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1118121 1119020 . - . ID=gene1093;Name=SH03_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05480;old_locus_tag=SH03_05475 NZ_CP010441.1 Protein Homology CDS 1118121 1119020 . - 0 ID=cds1049;Parent=gene1093;Dbxref=Genbank:WP_000952503.1;Name=WP_000952503.1;Note=controls the expression of the cynTSX operon involved in degrading and using cyanate as a sole nitrogen source;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000952503.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1119129 1119788 . + . ID=gene1094;Name=SH03_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05485;old_locus_tag=SH03_05480 NZ_CP010441.1 Protein Homology CDS 1119129 1119788 . + 0 ID=cds1050;Parent=gene1094;Dbxref=Genbank:WP_000658652.1;Name=WP_000658652.1;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_000658652.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1119819 1120289 . + . ID=gene1095;Name=SH03_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05490;old_locus_tag=SH03_05485 NZ_CP010441.1 Protein Homology CDS 1119819 1120289 . + 0 ID=cds1051;Parent=gene1095;Dbxref=Genbank:WP_000616243.1;Name=WP_000616243.1;gbkey=CDS;product=cyanate hydratase;protein_id=WP_000616243.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1120295 1121476 . + . ID=gene1096;Name=cynX;gbkey=Gene;gene=cynX;gene_biotype=protein_coding;locus_tag=SH03_RS05495;old_locus_tag=SH03_05490 NZ_CP010441.1 Protein Homology CDS 1120295 1121476 . + 0 ID=cds1052;Parent=gene1096;Dbxref=Genbank:WP_001301263.1;Name=WP_001301263.1;Note=MFS transporter family member induced in the presence of cyanate as part of a 3 gene operon%3B not essential;gbkey=CDS;gene=cynX;product=MFS transporter;protein_id=WP_001301263.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1121579 1122190 . - . ID=gene1097;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=SH03_RS05500;old_locus_tag=SH03_05495 NZ_CP010441.1 Protein Homology CDS 1121579 1122190 . - 0 ID=cds1053;Parent=gene1097;Dbxref=Genbank:WP_001335915.1;Name=WP_001335915.1;Note=transfers acetyl group from acetyl-CoA to the 6-hydroxyl of galactopyranosides%3B exact physiological role is unknown;gbkey=CDS;gene=lacA;product=galactoside O-acetyltransferase;protein_id=WP_001335915.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1122256 1123509 . - . ID=gene1098;Name=lacY;gbkey=Gene;gene=lacY;gene_biotype=protein_coding;locus_tag=SH03_RS05505;old_locus_tag=SH03_05500 NZ_CP010441.1 Protein Homology CDS 1122256 1123509 . - 0 ID=cds1054;Parent=gene1098;Dbxref=Genbank:WP_000291549.1;Name=WP_000291549.1;Note=lactose/proton symporter%3B mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides%3B member of major facilitator superfamily%3B functions as a monomer with 12 transmembrane segments;gbkey=CDS;gene=lacY;product=lactose permease;protein_id=WP_000291549.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1123561 1126635 . - . ID=gene1099;Name=lacZ;gbkey=Gene;gene=lacZ;gene_biotype=protein_coding;locus_tag=SH03_RS05510;old_locus_tag=SH03_05505 NZ_CP010441.1 Protein Homology CDS 1123561 1126635 . - 0 ID=cds1055;Parent=gene1099;Dbxref=Genbank:WP_000177906.1;Name=WP_000177906.1;Note=forms a homotetramer%3B hydrolyzes lactose disaccharide to galactose and glucose%3B converts lactose to allolactose which is the natural inducer of the lac operon;gbkey=CDS;gene=lacZ;product=beta-galactosidase;protein_id=WP_000177906.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1126758 1127717 . - . ID=gene1100;Name=lacI;gbkey=Gene;gene=lacI;gene_biotype=protein_coding;locus_tag=SH03_RS05515;old_locus_tag=SH03_05510 NZ_CP010441.1 Protein Homology CDS 1126758 1127717 . - 0 ID=cds1056;Parent=gene1100;Dbxref=Genbank:WP_014640691.1;Name=WP_014640691.1;Note=transcriptional repressor of lac operon%3B forms a homotetramer as a dimer of dimers%3B binds specific sites in lac operon resulting in DNA looping between the operators%3B binds allolactose as inducer;gbkey=CDS;gene=lacI;product=lac repressor;protein_id=WP_014640691.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1127917 1128750 . - . ID=gene1101;Name=SH03_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05520;old_locus_tag=SH03_05515 NZ_CP010441.1 Protein Homology CDS 1127917 1128750 . - 0 ID=cds1057;Parent=gene1101;Dbxref=Genbank:WP_001301325.1;Name=WP_001301325.1;Note=activator of 3-phenylpropionic acid catabolism;gbkey=CDS;product=mhp operon transcriptional activator;protein_id=WP_001301325.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1128941 1130605 . + . ID=gene1102;Name=mhpA;gbkey=Gene;gene=mhpA;gene_biotype=protein_coding;locus_tag=SH03_RS05525;old_locus_tag=SH03_05520 NZ_CP010441.1 Protein Homology CDS 1128941 1130605 . + 0 ID=cds1058;Parent=gene1102;Dbxref=Genbank:WP_001007407.1;Name=WP_001007407.1;Note=catalyzes the formation of 3-(2%2C3-dihydroxyphenyl)propionate from 3-(3-hydroxyphenyl)propionate;gbkey=CDS;gene=mhpA;product=3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;protein_id=WP_001007407.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1130607 1131551 . + . ID=gene1103;Name=mhpB;gbkey=Gene;gene=mhpB;gene_biotype=protein_coding;locus_tag=SH03_RS05530;old_locus_tag=SH03_05525 NZ_CP010441.1 Protein Homology CDS 1130607 1131551 . + 0 ID=cds1059;Parent=gene1103;Dbxref=Genbank:WP_000543457.1;Name=WP_000543457.1;Note=catalyzes the cleavage of 3-(2%2C3-dihydroxyphenyl) propionate into 2-hydroxy-6-oxonona-2%2C4-diene-1%2C9-dioate%3B part of the 3-phenylpropionic acid degradation pathway%3B member of the protocatechuate 4%2C5-dioxygenase family;gbkey=CDS;gene=mhpB;product=2%2C3-dihydroxyphenylpropionate/2%2C3-dihydroxicinnamic acid 1%2C2-dioxygenase;protein_id=WP_000543457.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1131569 1132435 . + . ID=gene1104;Name=SH03_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05535;old_locus_tag=SH03_05530 NZ_CP010441.1 Protein Homology CDS 1131569 1132435 . + 0 ID=cds1060;Parent=gene1104;Dbxref=Genbank:WP_000121907.1;Name=WP_000121907.1;gbkey=CDS;product=2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase;protein_id=WP_000121907.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1132445 1133254 . + . ID=gene1105;Name=SH03_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05540;old_locus_tag=SH03_05535 NZ_CP010441.1 Protein Homology CDS 1132445 1133254 . + 0 ID=cds1061;Parent=gene1105;Dbxref=Genbank:WP_000160710.1;Name=WP_000160710.1;gbkey=CDS;product=2-keto-4-pentenoate hydratase;protein_id=WP_000160710.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1133251 1134201 . + . ID=gene1106;Name=SH03_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05545;old_locus_tag=SH03_05540 NZ_CP010441.1 Protein Homology CDS 1133251 1134201 . + 0 ID=cds1062;Parent=gene1106;Dbxref=Genbank:WP_000044314.1;Name=WP_000044314.1;Note=catalyzes the formation of acetyl-CoA from acetalaldehyde;gbkey=CDS;product=acetaldehyde dehydrogenase;protein_id=WP_000044314.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1134198 1135211 . + . ID=gene1107;Name=SH03_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05550;old_locus_tag=SH03_05545 NZ_CP010441.1 Protein Homology CDS 1134198 1135211 . + 0 ID=cds1063;Parent=gene1107;Dbxref=Genbank:WP_001013499.1;Name=WP_001013499.1;Note=catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid%3B involved in the degradation of phenylpropionate;gbkey=CDS;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_001013499.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1135252 1135673 . + . ID=id77;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1135789 1137000 . + . ID=gene1108;Name=SH03_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05555;old_locus_tag=SH03_05550 NZ_CP010441.1 Protein Homology CDS 1135789 1137000 . + 0 ID=cds1064;Parent=gene1108;Dbxref=Genbank:WP_000107627.1;Name=WP_000107627.1;gbkey=CDS;product=3-(3-hydroxy-phenyl)propionate transporter;protein_id=WP_000107627.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1137102 1137641 . + . ID=gene1109;Name=SH03_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05560;old_locus_tag=SH03_05555 NZ_CP010441.1 Protein Homology CDS 1137102 1137641 . + 0 ID=cds1065;Parent=gene1109;Dbxref=Genbank:WP_001096705.1;Name=WP_001096705.1;gbkey=CDS;product=DUF2058 domain-containing protein;protein_id=WP_001096705.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1137865 1138698 . - . ID=gene1110;Name=SH03_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05565;old_locus_tag=SH03_05560 NZ_CP010441.1 Protein Homology CDS 1137865 1138698 . - 0 ID=cds1066;Parent=gene1110;Dbxref=Genbank:WP_000419081.1;Name=WP_000419081.1;gbkey=CDS;product=S-formylglutathione hydrolase FrmB;protein_id=WP_000419081.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1138792 1139901 . - . ID=gene1111;Name=SH03_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05570;old_locus_tag=SH03_05565 NZ_CP010441.1 Protein Homology CDS 1138792 1139901 . - 0 ID=cds1067;Parent=gene1111;Dbxref=Genbank:WP_000842106.1;Name=WP_000842106.1;Note=catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione%3B also catalyzes the formation of aldehyde or ketone from alcohols;gbkey=CDS;product=S-(hydroxymethyl)glutathione dehydrogenase;protein_id=WP_000842106.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1139936 1140211 . - . ID=gene1112;Name=SH03_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05575;old_locus_tag=SH03_05570 NZ_CP010441.1 Protein Homology CDS 1139936 1140211 . - 0 ID=cds1068;Parent=gene1112;Dbxref=Genbank:WP_001141271.1;Name=WP_001141271.1;Note=formaldehyde-induced negative regulator of the frmRAB operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001141271.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1140399 1141172 . - . ID=gene1113;Name=SH03_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05580;old_locus_tag=SH03_05575 NZ_CP010441.1 Protein Homology CDS 1140399 1141172 . - 0 ID=cds1069;Parent=gene1113;Dbxref=Genbank:WP_000596084.1;Name=WP_000596084.1;gbkey=CDS;product=outer membrane protein;protein_id=WP_000596084.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1141174 1141617 . - . ID=gene1114;Name=SH03_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05585;old_locus_tag=SH03_05580 NZ_CP010441.1 Protein Homology CDS 1141174 1141617 . - 0 ID=cds1070;Parent=gene1114;Dbxref=Genbank:WP_000012218.1;Name=WP_000012218.1;gbkey=CDS;product=transferase;protein_id=WP_000012218.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1141588 1142922 . + . ID=id78;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1141681 1142046 . + . ID=gene1115;Name=SH03_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05590;old_locus_tag=SH03_05585 NZ_CP010441.1 Protein Homology CDS 1141681 1142046 . + 0 ID=cds1071;Parent=gene1115;Dbxref=Genbank:WP_000567766.1;Name=WP_000567766.1;Note=represses IS2 gene transcription;gbkey=CDS;product=transposase;protein_id=WP_000567766.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1142004 1142909 . + . ID=gene1116;Name=SH03_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05595;old_locus_tag=SH03_05590 NZ_CP010441.1 Protein Homology CDS 1142004 1142909 . + 0 ID=cds1072;Parent=gene1116;Dbxref=Genbank:WP_000376502.1;Name=WP_000376502.1;gbkey=CDS;product=integrase;protein_id=WP_000376502.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1143069 1144265 . - . ID=gene1117;Name=SH03_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05600;old_locus_tag=SH03_05595 NZ_CP010441.1 Protein Homology CDS 1143069 1144265 . - 0 ID=cds1073;Parent=gene1117;Dbxref=Genbank:WP_000860444.1;Name=WP_000860444.1;gbkey=CDS;product=family 2 glycosyltransferase;protein_id=WP_000860444.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1144389 1144946 . - . ID=gene1118;Name=SH03_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05605;old_locus_tag=SH03_05600 NZ_CP010441.1 Protein Homology CDS 1144389 1144946 . - 0 ID=cds1074;Parent=gene1118;Dbxref=Genbank:WP_000362028.1;Name=WP_000362028.1;gbkey=CDS;product=PIG-L family deacetylase;protein_id=WP_000362028.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1145562 1146524 . + . ID=gene1119;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=SH03_RS05610;old_locus_tag=SH03_05605 NZ_CP010441.1 Protein Homology CDS 1145562 1146524 . + 0 ID=cds1075;Parent=gene1119;Dbxref=Genbank:WP_001018417.1;Name=WP_001018417.1;Note=with TauB and TauC is responsible for taurine uptake.;gbkey=CDS;gene=tauA;product=taurine-binding periplasmic protein;protein_id=WP_001018417.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1146537 1147304 . + . ID=gene1120;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=SH03_RS05615;old_locus_tag=SH03_05610 NZ_CP010441.1 Protein Homology CDS 1146537 1147304 . + 0 ID=cds1076;Parent=gene1120;Dbxref=Genbank:WP_000939375.1;Name=WP_000939375.1;Note=Part of the ABC transporter complex tauABC involved in taurine import;gbkey=CDS;gene=tauB;product=taurine import ATP-binding protein TauB;protein_id=WP_000939375.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1147301 1148128 . + . ID=gene1121;Name=SH03_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05620;old_locus_tag=SH03_05615 NZ_CP010441.1 Protein Homology CDS 1147301 1148128 . + 0 ID=cds1077;Parent=gene1121;Dbxref=Genbank:WP_000114620.1;Name=WP_000114620.1;gbkey=CDS;product=taurine ABC transporter permease;protein_id=WP_000114620.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1148125 1148976 . + . ID=gene1122;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=SH03_RS05625;old_locus_tag=SH03_05620 NZ_CP010441.1 Protein Homology CDS 1148125 1148976 . + 0 ID=cds1078;Parent=gene1122;Dbxref=Genbank:WP_000004027.1;Name=WP_000004027.1;Note=catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide%3B non-heme iron oxidase%3B allows the use of taurine as an alternative sulfur source%3B forms homodimers;gbkey=CDS;gene=tauD;product=alpha-ketoglutarate-dependent taurine dioxygenase;protein_id=WP_000004027.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1149083 1150057 . - . ID=gene1123;Name=SH03_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05630;old_locus_tag=SH03_05625 NZ_CP010441.1 Protein Homology CDS 1149083 1150057 . - 0 ID=cds1079;Parent=gene1123;Dbxref=Genbank:WP_001295337.1;Name=WP_001295337.1;gbkey=CDS;product=delta-aminolevulinic acid dehydratase;protein_id=WP_001295337.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1150227 1150478 . - . ID=gene1124;Name=SH03_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05635;old_locus_tag=SH03_05630 NZ_CP010441.1 Protein Homology CDS 1150227 1150478 . - 0 ID=cds1080;Parent=gene1124;Dbxref=Genbank:WP_000250375.1;Name=WP_000250375.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000250375.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1150581 1152107 . + . ID=gene1125;Name=SH03_RS05640;end_range=1152107,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS05640;partial=true;pseudo=true NZ_CP010441.1 Protein Homology CDS 1150581 1152107 . + 0 ID=cds1081;Parent=gene1125;end_range=1152107,.;gbkey=CDS;partial=true;product=pertactin;pseudo=true;transl_except=(pos:1152039..1152041%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1152038 1153302 . + . ID=id79;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1152069 1152935 . - . ID=gene1126;Name=SH03_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05645;old_locus_tag=SH03_05640 NZ_CP010441.1 Protein Homology CDS 1152069 1152935 . - 0 ID=cds1082;Parent=gene1126;Dbxref=Genbank:WP_000878218.1;Name=WP_000878218.1;gbkey=CDS;product=transposase;protein_id=WP_000878218.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1152932 1153231 . - . ID=gene1127;Name=SH03_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05650;old_locus_tag=SH03_05645 NZ_CP010441.1 Protein Homology CDS 1152932 1153231 . - 0 ID=cds1083;Parent=gene1127;Dbxref=Genbank:WP_000169527.1;Name=WP_000169527.1;gbkey=CDS;product=transposase;protein_id=WP_000169527.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1153306 1154748 . + . ID=gene1128;Name=SH03_RS05655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS05655;partial=true;pseudo=true;start_range=.,1153306 NZ_CP010441.1 Protein Homology CDS 1153306 1154748 . + 0 ID=cds1084;Parent=gene1128;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=pertactin;pseudo=true;start_range=.,1153306;transl_table=11 NZ_CP010441.1 RefSeq gene 1154836 1155459 . + . ID=gene1129;Name=SH03_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05660;old_locus_tag=SH03_05655 NZ_CP010441.1 Protein Homology CDS 1154836 1155459 . + 0 ID=cds1085;Parent=gene1129;Dbxref=Genbank:WP_001295335.1;Name=WP_001295335.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001295335.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1155460 1156617 . - . ID=gene1130;Name=SH03_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05665;old_locus_tag=SH03_05660 NZ_CP010441.1 Protein Homology CDS 1155460 1156617 . - 0 ID=cds1086;Parent=gene1130;Dbxref=Genbank:WP_000830741.1;Name=WP_000830741.1;Note=this protein has no known enzymatic function;gbkey=CDS;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_000830741.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1156755 1156949 . + . ID=gene1131;Name=SH03_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05670;old_locus_tag=SH03_05665 NZ_CP010441.1 Protein Homology CDS 1156755 1156949 . + 0 ID=cds1087;Parent=gene1131;Dbxref=Genbank:WP_001110751.1;Name=WP_001110751.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001110751.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1156969 1158189 . + . ID=gene1132;Name=SH03_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05675;old_locus_tag=SH03_05670 NZ_CP010441.1 Protein Homology CDS 1156969 1158189 . + 0 ID=cds1088;Parent=gene1132;Dbxref=Genbank:WP_001301663.1;Name=WP_001301663.1;Note=in Escherichia coli SbmA is involved in uptake of microcin J25%3B functions along with FhuA%2C TonB%2C and ExbB/D in this capacity%3B in Sinorhizobium meliloti%2C BacA is essential and required for symbiosis%3B defects appear to affect the cell envelope;gbkey=CDS;product=peptide antibiotic transporter SbmA;protein_id=WP_001301663.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1158202 1159296 . + . ID=gene1133;Name=SH03_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05680;old_locus_tag=SH03_05675 NZ_CP010441.1 Protein Homology CDS 1158202 1159296 . + 0 ID=cds1089;Parent=gene1133;Dbxref=Genbank:WP_000092067.1;Name=WP_000092067.1;gbkey=CDS;product=microcin transporter;protein_id=WP_000092067.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1159355 1159663 . - . ID=gene1134;Name=SH03_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05685;old_locus_tag=SH03_05680 NZ_CP010441.1 Protein Homology CDS 1159355 1159663 . - 0 ID=cds1090;Parent=gene1134;Dbxref=Genbank:WP_000763151.1;Name=WP_000763151.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000763151.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1159923 1160135 . + . ID=gene1135;Name=SH03_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05690;old_locus_tag=SH03_05685 NZ_CP010441.1 Protein Homology CDS 1159923 1160135 . + 0 ID=cds1091;Parent=gene1135;Dbxref=Genbank:WP_001295334.1;Name=WP_001295334.1;gbkey=CDS;product=DUF2754 domain-containing protein;protein_id=WP_001295334.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1160159 1161253 . - . ID=gene1136;Name=SH03_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05695;old_locus_tag=SH03_05690 NZ_CP010441.1 Protein Homology CDS 1160159 1161253 . - 0 ID=cds1092;Parent=gene1136;Dbxref=Genbank:WP_000413677.1;Name=WP_000413677.1;gbkey=CDS;product=D-alanine--D-alanine ligase A;protein_id=WP_000413677.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1161334 1161534 . + . ID=gene1137;Name=SH03_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05700;old_locus_tag=SH03_05695 NZ_CP010441.1 Protein Homology CDS 1161334 1161534 . + 0 ID=cds1093;Parent=gene1137;Dbxref=Genbank:WP_001299112.1;Name=WP_001299112.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001299112.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1161716 1161976 . + . ID=gene1138;Name=SH03_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05705;old_locus_tag=SH03_05700 NZ_CP010441.1 Protein Homology CDS 1161716 1161976 . + 0 ID=cds1094;Parent=gene1138;Dbxref=Genbank:WP_000792970.1;Name=WP_000792970.1;Note=RpoS stabilzer during Pi starvation%3B anti-adapter protein;gbkey=CDS;product=anti-adapter protein IraP;protein_id=WP_000792970.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1162077 1163492 . + . ID=gene1139;Name=SH03_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05710;old_locus_tag=SH03_05705 NZ_CP010441.1 Protein Homology CDS 1162077 1163492 . + 0 ID=cds1095;Parent=gene1139;Dbxref=Genbank:WP_000814403.1;Name=WP_000814403.1;gbkey=CDS;product=alkaline phosphatase;protein_id=WP_000814403.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1163611 1163931 . + . ID=gene1140;Name=SH03_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05715;old_locus_tag=SH03_05710 NZ_CP010441.1 Protein Homology CDS 1163611 1163931 . + 0 ID=cds1096;Parent=gene1140;Dbxref=Genbank:WP_001295332.1;Name=WP_001295332.1;gbkey=CDS;product=phosphate starvation-inducible protein PsiF;protein_id=WP_001295332.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1164033 1165148 . + . ID=gene1141;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=yaiC;locus_tag=SH03_RS05720;old_locus_tag=SH03_05715 NZ_CP010441.1 Protein Homology CDS 1164033 1165148 . + 0 ID=cds1097;Parent=gene1141;Dbxref=Genbank:WP_000484048.1;Name=WP_000484048.1;Note=catalyzes the conversion of 2 GTP into c-di-GMP%3B adrA overexpression induces cellulose biosynthesis%2C cell adherence to abiotic surfaces and swimming and swarming motility%3B AdrA acts post-transcriptionally on the bcsABZC operon activating cellulose biosynthesis;gbkey=CDS;gene=adrA;product=diguanylate cyclase;protein_id=WP_000484048.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1165165 1165974 . - . ID=gene1142;Name=SH03_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05725;old_locus_tag=SH03_05720 NZ_CP010441.1 Protein Homology CDS 1165165 1165974 . - 0 ID=cds1098;Parent=gene1142;Dbxref=Genbank:WP_001295331.1;Name=WP_001295331.1;Note=catalyzes the formation of L-proline from pyrroline-5-carboxylate;gbkey=CDS;product=pyrroline-5-carboxylate reductase;protein_id=WP_001295331.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1166094 1166552 . + . ID=gene1143;Name=SH03_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05730;old_locus_tag=SH03_05725 NZ_CP010441.1 Protein Homology CDS 1166094 1166552 . + 0 ID=cds1099;Parent=gene1143;Dbxref=Genbank:WP_000158159.1;Name=WP_000158159.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000158159.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1166735 1167259 . + . ID=gene1144;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=SH03_RS05735;old_locus_tag=SH03_05730 NZ_CP010441.1 Protein Homology CDS 1166735 1167259 . + 0 ID=cds1100;Parent=gene1144;Dbxref=Genbank:WP_000193393.1;Name=WP_000193393.1;Note=type II enzyme similar to type I but differentially regulated and with a lower Km%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroL;product=shikimate kinase;protein_id=WP_000193393.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1167309 1167500 . + . ID=gene1145;Name=SH03_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05740;old_locus_tag=SH03_05735 NZ_CP010441.1 Protein Homology CDS 1167309 1167500 . + 0 ID=cds1101;Parent=gene1145;Dbxref=Genbank:WP_001142439.1;Name=WP_001142439.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001142439.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1167531 1167728 . + . ID=gene1146;Name=SH03_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05745;old_locus_tag=SH03_05740 NZ_CP010441.1 Protein Homology CDS 1167531 1167728 . + 0 ID=cds1102;Parent=gene1146;Dbxref=Genbank:WP_001333307.1;Name=WP_001333307.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001333307.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1167758 1168435 . + . ID=gene1147;Name=SH03_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05750;old_locus_tag=SH03_05745 NZ_CP010441.1 Protein Homology CDS 1167758 1168435 . + 0 ID=cds1103;Parent=gene1147;Dbxref=Genbank:WP_001276420.1;Name=WP_001276420.1;gbkey=CDS;product=protein AroM;protein_id=WP_001276420.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1168507 1168791 . + . ID=gene1148;Name=SH03_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05755;old_locus_tag=SH03_05750 NZ_CP010441.1 Protein Homology CDS 1168507 1168791 . + 0 ID=cds1104;Parent=gene1148;Dbxref=Genbank:WP_000941942.1;Name=WP_000941942.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000941942.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1168999 1169280 . + . ID=gene1149;Name=SH03_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05760;old_locus_tag=SH03_05755 NZ_CP010441.1 Protein Homology CDS 1168999 1169280 . + 0 ID=cds1105;Parent=gene1149;Dbxref=Genbank:WP_000941997.1;Name=WP_000941997.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000941997.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1169438 1170349 . - . ID=gene1150;Name=SH03_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05765;old_locus_tag=SH03_05760 NZ_CP010441.1 Protein Homology CDS 1169438 1170349 . - 0 ID=cds1106;Parent=gene1150;Dbxref=Genbank:WP_001298537.1;Name=WP_001298537.1;Note=Required for efficient pilin antigenic variation;gbkey=CDS;product=recombination-associated protein RdgC;protein_id=WP_001298537.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1170474 1171382 . + . ID=gene1151;Name=SH03_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05770;old_locus_tag=SH03_05765 NZ_CP010441.1 Protein Homology CDS 1170474 1171382 . + 0 ID=cds1107;Parent=gene1151;Dbxref=Genbank:WP_001219309.1;Name=WP_001219309.1;Note=catalyzes phosphorylation of fructose%3B cytosolic enzyme;gbkey=CDS;product=fructokinase;protein_id=WP_001219309.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1171627 1172811 . - . ID=gene1152;Name=SH03_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05775;old_locus_tag=SH03_05770 NZ_CP010441.1 Protein Homology CDS 1171627 1172811 . - 0 ID=cds1108;Parent=gene1152;Dbxref=Genbank:WP_001326926.1;Name=WP_001326926.1;Note=member of the major facilitator superfamily (MFS) of transporters%3B unknown function%3B may be associated with transport or processing of arabinose polymers;gbkey=CDS;product=protein AraJ;protein_id=WP_001326926.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1172937 1176083 . - . ID=gene1153;Name=SH03_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05780;old_locus_tag=SH03_05775 NZ_CP010441.1 Protein Homology CDS 1172937 1176083 . - 0 ID=cds1109;Parent=gene1153;Dbxref=Genbank:WP_000698951.1;Name=WP_000698951.1;Note=with SbcD cleaves DNA hairpin structures%3B also has 5' single-strand endonuclease activity;gbkey=CDS;product=nuclease SbcCD subunit C;protein_id=WP_000698951.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1176080 1177282 . - . ID=gene1154;Name=SH03_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05785;old_locus_tag=SH03_05780 NZ_CP010441.1 Protein Homology CDS 1176080 1177282 . - 0 ID=cds1110;Parent=gene1154;Dbxref=Genbank:WP_001221319.1;Name=WP_001221319.1;Note=with SbcC cleaves DNA hairpin structure%2C also has 5' single-strand endonuclease activity;gbkey=CDS;product=nuclease SbcCD subunit D;protein_id=WP_001221319.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1177472 1178161 . + . ID=gene1155;Name=SH03_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05790;old_locus_tag=SH03_05785 NZ_CP010441.1 Protein Homology CDS 1177472 1178161 . + 0 ID=cds1111;Parent=gene1155;Dbxref=Genbank:WP_000113933.1;Name=WP_000113933.1;Note=two component response regulator for the phosphate regulon%3B PhoR phosphorylates PhoB;gbkey=CDS;product=two-component system response regulator;protein_id=WP_000113933.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1178219 1179514 . + . ID=gene1156;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=SH03_RS05795;old_locus_tag=SH03_05790 NZ_CP010441.1 Protein Homology CDS 1178219 1179514 . + 0 ID=cds1112;Parent=gene1156;Dbxref=Genbank:WP_000893623.1;Name=WP_000893623.1;Note=membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB;gbkey=CDS;gene=phoR;product=phosphate regulon sensor protein PhoR;protein_id=WP_000893623.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1179921 1181240 . + . ID=gene1157;Name=SH03_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05800;old_locus_tag=SH03_05795 NZ_CP010441.1 Protein Homology CDS 1179921 1181240 . + 0 ID=cds1113;Parent=gene1157;Dbxref=Genbank:WP_000149639.1;Name=WP_000149639.1;Note=sodium:branched-chain amino acid symporter;gbkey=CDS;product=branched-chain amino acid transport system 2 carrier protein;protein_id=WP_000149639.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1181316 1182689 . + . ID=gene1158;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=SH03_RS05805;old_locus_tag=SH03_05800 NZ_CP010441.1 Protein Homology CDS 1181316 1182689 . + 0 ID=cds1114;Parent=gene1158;Dbxref=Genbank:WP_001295329.1;Name=WP_001295329.1;Note=cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation;gbkey=CDS;gene=proY;product=proline-specific permease ProY;protein_id=WP_001295329.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1182845 1184662 . + . ID=gene1159;Name=SH03_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05810;old_locus_tag=SH03_05805 NZ_CP010441.1 Protein Homology CDS 1182845 1184662 . + 0 ID=cds1115;Parent=gene1159;Dbxref=Genbank:WP_001310597.1;Name=WP_001310597.1;gbkey=CDS;product=maltodextrin glucosidase;protein_id=WP_001310597.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1184667 1185248 . - . ID=gene1160;Name=SH03_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05815;old_locus_tag=SH03_05810 NZ_CP010441.1 Protein Homology CDS 1184667 1185248 . - 0 ID=cds1116;Parent=gene1160;Dbxref=Genbank:WP_001009885.1;Name=WP_001009885.1;Note=Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP;gbkey=CDS;product=ACP phosphodiesterase;protein_id=WP_001009885.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1185341 1186411 . + . ID=gene1161;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=SH03_RS05820;old_locus_tag=SH03_05815 NZ_CP010441.1 Protein Homology CDS 1185341 1186411 . + 0 ID=cds1117;Parent=gene1161;Dbxref=Genbank:WP_001266503.1;Name=WP_001266503.1;Note=Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step;gbkey=CDS;gene=queA;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_001266503.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1186467 1187594 . + . ID=gene1162;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=SH03_RS05825;old_locus_tag=SH03_05820 NZ_CP010441.1 Protein Homology CDS 1186467 1187594 . + 0 ID=cds1118;Parent=gene1162;Dbxref=Genbank:WP_000667319.1;Name=WP_000667319.1;Note=Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr);gbkey=CDS;gene=tgt;product=queuine tRNA-ribosyltransferase;protein_id=WP_000667319.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1187617 1187949 . + . ID=gene1163;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=SH03_RS05830;old_locus_tag=SH03_05825 NZ_CP010441.1 Protein Homology CDS 1187617 1187949 . + 0 ID=cds1119;Parent=gene1163;Dbxref=Genbank:WP_000007629.1;Name=WP_000007629.1;Note=member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex;gbkey=CDS;gene=yajC;product=preprotein translocase subunit YajC;protein_id=WP_000007629.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1187977 1189824 . + . ID=gene1164;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=SH03_RS05835;old_locus_tag=SH03_05830 NZ_CP010441.1 Protein Homology CDS 1187977 1189824 . + 0 ID=cds1120;Parent=gene1164;Dbxref=Genbank:WP_000934822.1;Name=WP_000934822.1;Note=part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane;gbkey=CDS;gene=secD;product=preprotein translocase subunit SecD;protein_id=WP_000934822.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1189835 1190806 . + . ID=gene1165;Name=SH03_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05840;old_locus_tag=SH03_05835 NZ_CP010441.1 Protein Homology CDS 1189835 1190806 . + 0 ID=cds1121;Parent=gene1165;Dbxref=Genbank:WP_000046637.1;Name=WP_000046637.1;gbkey=CDS;product=protein translocase subunit SecF;protein_id=WP_000046637.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1190935 1191282 . + . ID=gene1166;Name=SH03_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05845;old_locus_tag=SH03_05840 NZ_CP010441.1 Protein Homology CDS 1190935 1191282 . + 0 ID=cds1122;Parent=gene1166;Dbxref=Genbank:WP_000974813.1;Name=WP_000974813.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000974813.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1191296 1191418 . + . ID=gene1167;Name=SH03_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05850;old_locus_tag=SH03_05845 NZ_CP010441.1 Protein Homology CDS 1191296 1191418 . + 0 ID=cds1123;Parent=gene1167;Dbxref=Genbank:WP_001326928.1;Name=WP_001326928.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001326928.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1191459 1192343 . - . ID=gene1168;Name=SH03_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05855;old_locus_tag=SH03_05850 NZ_CP010441.1 Protein Homology CDS 1191459 1192343 . - 0 ID=cds1124;Parent=gene1168;Dbxref=Genbank:WP_001295328.1;Name=WP_001295328.1;Note=receptor of phage T6 and colicin K%3B involved in the transfer of deoxyribo- and ribo-nucleotides across the outer membrane;gbkey=CDS;product=nucleoside-specific channel-forming protein tsx;protein_id=WP_001295328.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1192642 1193181 . - . ID=gene1169;Name=SH03_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05860;old_locus_tag=SH03_05855 NZ_CP010441.1 Protein Homology CDS 1192642 1193181 . - 0 ID=cds1125;Parent=gene1169;Dbxref=Genbank:WP_001326929.1;Name=WP_001326929.1;gbkey=CDS;product=lipoprotein;protein_id=WP_001326929.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1193332 1193781 . + . ID=gene1170;Name=SH03_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05865;old_locus_tag=SH03_05860 NZ_CP010441.1 Protein Homology CDS 1193332 1193781 . + 0 ID=cds1126;Parent=gene1170;Dbxref=Genbank:WP_000543535.1;Name=WP_000543535.1;gbkey=CDS;product=NrdR family transcriptional regulator;protein_id=WP_000543535.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1193785 1194888 . + . ID=gene1171;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=SH03_RS05870;old_locus_tag=SH03_05865 NZ_CP010441.1 Protein Homology CDS 1193785 1194888 . + 0 ID=cds1127;Parent=gene1171;Dbxref=Genbank:WP_001150457.1;Name=WP_001150457.1;Note=riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway%3B catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil;gbkey=CDS;gene=ribD;product=riboflavin biosynthesis protein RibD;protein_id=WP_001150457.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1194977 1195447 . + . ID=gene1172;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=SH03_RS05875;old_locus_tag=SH03_05870 NZ_CP010441.1 Protein Homology CDS 1194977 1195447 . + 0 ID=cds1128;Parent=gene1172;Dbxref=Genbank:WP_001021161.1;Name=WP_001021161.1;Note=RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not;gbkey=CDS;gene=ribH;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021161.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1195467 1195886 . + . ID=gene1173;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=SH03_RS05880;old_locus_tag=SH03_05875 NZ_CP010441.1 Protein Homology CDS 1195467 1195886 . + 0 ID=cds1129;Parent=gene1173;Dbxref=Genbank:WP_000801125.1;Name=WP_000801125.1;Note=Regulates rRNA biosynthesis by transcriptional antitermination;gbkey=CDS;gene=nusB;product=transcription antitermination protein NusB;protein_id=WP_000801125.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1195964 1196941 . + . ID=gene1174;Name=SH03_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05885;old_locus_tag=SH03_05880 NZ_CP010441.1 Protein Homology CDS 1195964 1196941 . + 0 ID=cds1130;Parent=gene1174;Dbxref=Genbank:WP_000742109.1;Name=WP_000742109.1;Note=catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP;gbkey=CDS;product=thiamine-monophosphate kinase;protein_id=WP_000742109.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1196919 1197437 . + . ID=gene1175;Name=SH03_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05890;old_locus_tag=SH03_05885 NZ_CP010441.1 Protein Homology CDS 1196919 1197437 . + 0 ID=cds1131;Parent=gene1175;Dbxref=Genbank:WP_000154044.1;Name=WP_000154044.1;Note=hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate;gbkey=CDS;product=phosphatidylglycerophosphatase A;protein_id=WP_000154044.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1197491 1198465 . - . ID=gene1176;Name=SH03_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05895;old_locus_tag=SH03_05890 NZ_CP010441.1 Protein Homology CDS 1197491 1198465 . - 0 ID=cds1132;Parent=gene1176;Dbxref=Genbank:WP_001199800.1;Name=WP_001199800.1;gbkey=CDS;product=2-carboxybenzaldehyde reductase;protein_id=WP_001199800.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1198480 1198603 . + . ID=id80;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1198645 1200507 . - . ID=gene1177;Name=SH03_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05900;old_locus_tag=SH03_05895 NZ_CP010441.1 Protein Homology CDS 1198645 1200507 . - 0 ID=cds1133;Parent=gene1177;Dbxref=Genbank:WP_000006797.1;Name=WP_000006797.1;Note=catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate;gbkey=CDS;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_000006797.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1200532 1201431 . - . ID=gene1178;Name=SH03_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05905;old_locus_tag=SH03_05900 NZ_CP010441.1 Protein Homology CDS 1200532 1201431 . - 0 ID=cds1134;Parent=gene1178;Dbxref=Genbank:WP_000347217.1;Name=WP_000347217.1;gbkey=CDS;product=farnesyl-diphosphate synthase;protein_id=WP_000347217.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1201431 1201673 . - . ID=gene1179;Name=SH03_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05910;old_locus_tag=SH03_05905 NZ_CP010441.1 Protein Homology CDS 1201431 1201673 . - 0 ID=cds1135;Parent=gene1179;Dbxref=Genbank:WP_001124935.1;Name=WP_001124935.1;Note=catalyzes the bidirectional exonucleolytic cleavage of DNA;gbkey=CDS;product=exodeoxyribonuclease 7 small subunit;protein_id=WP_001124935.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1201879 1203327 . + . ID=gene1180;Name=SH03_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05915;old_locus_tag=SH03_05910 NZ_CP010441.1 Protein Homology CDS 1201879 1203327 . + 0 ID=cds1136;Parent=gene1180;Dbxref=Genbank:WP_000668662.1;Name=WP_000668662.1;Note=catalyzes the conversion of uridine to 4-thiouridinine tRNA%3B also required for the synthesis of the thiazole moiety;gbkey=CDS;product=tRNA sulfurtransferase;protein_id=WP_000668662.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1203381 1203971 . - . ID=gene1181;Name=SH03_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05920;old_locus_tag=SH03_05915 NZ_CP010441.1 Protein Homology CDS 1203381 1203971 . - 0 ID=cds1137;Parent=gene1181;Dbxref=Genbank:WP_001276305.1;Name=WP_001276305.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001276305.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1203934 1204845 . - . ID=gene1182;Name=SH03_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05925;old_locus_tag=SH03_05920 NZ_CP010441.1 Protein Homology CDS 1203934 1204845 . - 0 ID=cds1138;Parent=gene1182;Dbxref=Genbank:WP_000705865.1;Name=WP_000705865.1;Note=ketopantoate reductase%3B catalyzes the NADPH reduction of ketopantoate to pantoate%3B functions in pantothenate (vitamin B5) biosynthesis;gbkey=CDS;product=2-dehydropantoate 2-reductase;protein_id=WP_000705865.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1205013 1205504 . + . ID=gene1183;Name=SH03_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05930;old_locus_tag=SH03_05925 NZ_CP010441.1 Protein Homology CDS 1205013 1205504 . + 0 ID=cds1139;Parent=gene1183;Dbxref=Genbank:WP_001138904.1;Name=WP_001138904.1;Note=nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription;gbkey=CDS;product=nucleotide-binding protein;protein_id=WP_001138904.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1205632 1206996 . - . ID=gene1184;Name=SH03_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05935;old_locus_tag=SH03_05930 NZ_CP010441.1 Protein Homology CDS 1205632 1206996 . - 0 ID=cds1140;Parent=gene1184;Dbxref=Genbank:WP_001000963.1;Name=WP_001000963.1;gbkey=CDS;product=transporter;protein_id=WP_001000963.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1207145 1208035 . - . ID=gene1185;Name=SH03_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05940;old_locus_tag=SH03_05935 NZ_CP010441.1 Protein Homology CDS 1207145 1208035 . - 0 ID=cds1141;Parent=gene1185;Dbxref=Genbank:WP_000971336.1;Name=WP_000971336.1;Note=converts protoheme IX and farnesyl diphosphate to heme O;gbkey=CDS;product=protoheme IX farnesyltransferase;protein_id=WP_000971336.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1208047 1208376 . - . ID=gene1186;Name=SH03_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05945;old_locus_tag=SH03_05940 NZ_CP010441.1 Protein Homology CDS 1208047 1208376 . - 0 ID=cds1142;Parent=gene1186;Dbxref=Genbank:WP_000019869.1;Name=WP_000019869.1;gbkey=CDS;product=cytochrome bo(3) ubiquinol oxidase subunit 4;protein_id=WP_000019869.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1208376 1208990 . - . ID=gene1187;Name=SH03_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05950;old_locus_tag=SH03_05945 NZ_CP010441.1 Protein Homology CDS 1208376 1208990 . - 0 ID=cds1143;Parent=gene1187;Dbxref=Genbank:WP_000179819.1;Name=WP_000179819.1;gbkey=CDS;product=cytochrome bo(3) ubiquinol oxidase subunit 3;protein_id=WP_000179819.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1208980 1210971 . - . ID=gene1188;Name=SH03_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05955;old_locus_tag=SH03_05950 NZ_CP010441.1 Protein Homology CDS 1208980 1210971 . - 0 ID=cds1144;Parent=gene1188;Dbxref=Genbank:WP_000467180.1;Name=WP_000467180.1;gbkey=CDS;product=cytochrome bo(3) ubiquinol oxidase subunit 1;protein_id=WP_000467180.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1210993 1211940 . - . ID=gene1189;Name=SH03_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05960;old_locus_tag=SH03_05955 NZ_CP010441.1 Protein Homology CDS 1210993 1211940 . - 0 ID=cds1145;Parent=gene1189;Dbxref=Genbank:WP_001239436.1;Name=WP_001239436.1;gbkey=CDS;product=cytochrome bo(3) ubiquinol oxidase subunit 2;protein_id=WP_001239436.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1212400 1213875 . - . ID=gene1190;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=SH03_RS05965;old_locus_tag=SH03_05960 NZ_CP010441.1 Protein Homology CDS 1212400 1213875 . - 0 ID=cds1146;Parent=gene1190;Dbxref=Genbank:WP_000098429.1;Name=WP_000098429.1;Note=in Escherichia coli this protein is a permease involved in peptidoglycan recycling%3B member of major facilitator superfamily%3B MFS%3B inner membrane protein;gbkey=CDS;gene=ampG;product=muropeptide MFS transporter AmpG;protein_id=WP_000098429.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1213919 1214497 . - . ID=gene1191;Name=SH03_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05970;old_locus_tag=SH03_05965 NZ_CP010441.1 Protein Homology CDS 1213919 1214497 . - 0 ID=cds1147;Parent=gene1191;Dbxref=Genbank:WP_001295326.1;Name=WP_001295326.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001295326.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1214802 1215119 . + . ID=gene1192;Name=SH03_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05975;old_locus_tag=SH03_05970 NZ_CP010441.1 Protein Homology CDS 1214802 1215119 . + 0 ID=cds1148;Parent=gene1192;Dbxref=Genbank:WP_000973448.1;Name=WP_000973448.1;Note=positive transcriptional regulator of morphogenetic pathway%3B controlling several genes involved in oxidative stress%2C acid stress%2C heat shock%2C osmotic shock%2C and carbon-starvation stress;gbkey=CDS;product=protein BolA;protein_id=WP_000973448.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1215128 1215316 . + . ID=gene1193;Name=SH03_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05980;old_locus_tag=SH03_05975 NZ_CP010441.1 Protein Homology CDS 1215128 1215316 . + 0 ID=cds1149;Parent=gene1193;Dbxref=Genbank:WP_001177122.1;Name=WP_001177122.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001177122.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1215463 1216761 . + . ID=gene1194;Name=SH03_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05985;old_locus_tag=SH03_05980 NZ_CP010441.1 Protein Homology CDS 1215463 1216761 . + 0 ID=cds1150;Parent=gene1194;Dbxref=Genbank:WP_001198386.1;Name=WP_001198386.1;gbkey=CDS;product=trigger factor;protein_id=WP_001198386.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1217007 1217630 . + . ID=gene1195;Name=SH03_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS05990;old_locus_tag=SH03_05985 NZ_CP010441.1 Protein Homology CDS 1217007 1217630 . + 0 ID=cds1151;Parent=gene1195;Dbxref=Genbank:WP_000122253.1;Name=WP_000122253.1;gbkey=CDS;product=ATP-dependent Clp protease proteolytic subunit;protein_id=WP_000122253.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1217756 1219030 . + . ID=gene1196;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=SH03_RS05995;old_locus_tag=SH03_05990 NZ_CP010441.1 Protein Homology CDS 1217756 1219030 . + 0 ID=cds1152;Parent=gene1196;Dbxref=Genbank:WP_000130305.1;Name=WP_000130305.1;Note=binds and unfolds substrates as part of the ClpXP protease;gbkey=CDS;gene=clpX;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_000130305.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1219218 1221572 . + . ID=gene1197;Name=SH03_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06000;old_locus_tag=SH03_05995 NZ_CP010441.1 Protein Homology CDS 1219218 1221572 . + 0 ID=cds1153;Parent=gene1197;Dbxref=Genbank:WP_001295325.1;Name=WP_001295325.1;gbkey=CDS;product=lon protease;protein_id=WP_001295325.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1221781 1222053 . + . ID=gene1198;Name=SH03_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06005;old_locus_tag=SH03_06000 NZ_CP010441.1 Protein Homology CDS 1221781 1222053 . + 0 ID=cds1154;Parent=gene1198;Dbxref=Genbank:WP_001043542.1;Name=WP_001043542.1;Note=histone-like DNA-binding protein;gbkey=CDS;product=DNA-binding protein HU-beta;protein_id=WP_001043542.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1222245 1224116 . + . ID=gene1199;Name=SH03_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06010;old_locus_tag=SH03_06005 NZ_CP010441.1 Protein Homology CDS 1222245 1224116 . + 0 ID=cds1155;Parent=gene1199;Dbxref=Genbank:WP_000969372.1;Name=WP_000969372.1;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_000969372.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1224267 1224638 . + . ID=gene1200;Name=SH03_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06015;old_locus_tag=SH03_06010 NZ_CP010441.1 Protein Homology CDS 1224267 1224638 . + 0 ID=cds1156;Parent=gene1200;Dbxref=Genbank:WP_000680312.1;Name=WP_000680312.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000680312.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1224732 1225130 . + . ID=gene1201;Name=SH03_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06020;old_locus_tag=SH03_06015 NZ_CP010441.1 Protein Homology CDS 1224732 1225130 . + 0 ID=cds1157;Parent=gene1201;Dbxref=Genbank:WP_001194534.1;Name=WP_001194534.1;gbkey=CDS;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194534.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1225182 1225877 . - . ID=gene1202;Name=SH03_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06025;old_locus_tag=SH03_06020 NZ_CP010441.1 Protein Homology CDS 1225182 1225877 . - 0 ID=cds1158;Parent=gene1202;Dbxref=Genbank:WP_000817220.1;Name=WP_000817220.1;Note=YbaX%3B catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0)%2C as one of the early reactions of quenosine biosynthesis%3B quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn%2C Asp%2C Tyr%2C and His;gbkey=CDS;product=7-cyano-7-deazaguanine synthase;protein_id=WP_000817220.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1225942 1227642 . - . ID=gene1203;Name=SH03_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06030;old_locus_tag=SH03_06025 NZ_CP010441.1 Protein Homology CDS 1225942 1227642 . - 0 ID=cds1159;Parent=gene1203;Dbxref=Genbank:WP_001238234.1;Name=WP_001238234.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_001238234.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1227742 1228560 . + . ID=gene1204;Name=SH03_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06035;old_locus_tag=SH03_06030 NZ_CP010441.1 Protein Homology CDS 1227742 1228560 . + 0 ID=cds1160;Parent=gene1204;Dbxref=Genbank:WP_001336137.1;Name=WP_001336137.1;Note=HMP-PP phosphatase%3B catalyzes the hydrolysis of 4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5-hydroxymethylpyrimidine phosphate (HMP-P);gbkey=CDS;product=HMP-PP phosphatase;protein_id=WP_001336137.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1228713 1229171 . + . ID=gene1205;Name=SH03_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06040;old_locus_tag=SH03_06035 NZ_CP010441.1 Protein Homology CDS 1228713 1229171 . + 0 ID=cds1161;Parent=gene1205;Dbxref=Genbank:WP_000884589.1;Name=WP_000884589.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000884589.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1229201 1230973 . + . ID=gene1206;Name=SH03_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06045;old_locus_tag=SH03_06040 NZ_CP010441.1 Protein Homology CDS 1229201 1230973 . + 0 ID=cds1162;Parent=gene1206;Dbxref=Genbank:WP_001235649.1;Name=WP_001235649.1;gbkey=CDS;product=multidrug resistance-like ATP-binding protein MdlA;protein_id=WP_001235649.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1230966 1232747 . + . ID=gene1207;Name=SH03_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06050;old_locus_tag=SH03_06045 NZ_CP010441.1 Protein Homology CDS 1230966 1232747 . + 0 ID=cds1163;Parent=gene1207;Dbxref=Genbank:WP_001256201.1;Name=WP_001256201.1;gbkey=CDS;product=multidrug resistance-like ATP-binding protein MdlB;protein_id=WP_001256201.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1232928 1233266 . + . ID=gene1208;Name=SH03_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06055;old_locus_tag=SH03_06050 NZ_CP010441.1 Protein Homology CDS 1232928 1233266 . + 0 ID=cds1164;Parent=gene1208;Dbxref=Genbank:WP_000780338.1;Name=WP_000780338.1;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA;gbkey=CDS;product=nitrogen regulatory protein P-II 2;protein_id=WP_000780338.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1233296 1234582 . + . ID=gene1209;Name=SH03_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06060;old_locus_tag=SH03_06055 NZ_CP010441.1 Protein Homology CDS 1233296 1234582 . + 0 ID=cds1165;Parent=gene1209;Dbxref=Genbank:WP_000685029.1;Name=WP_000685029.1;gbkey=CDS;product=ammonia channel;protein_id=WP_000685029.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1234631 1235491 . - . ID=gene1210;Name=SH03_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06065;old_locus_tag=SH03_06060 NZ_CP010441.1 Protein Homology CDS 1234631 1235491 . - 0 ID=cds1166;Parent=gene1210;Dbxref=Genbank:WP_000075876.1;Name=WP_000075876.1;gbkey=CDS;product=acyl-CoA thioesterase 2;protein_id=WP_000075876.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1235709 1236281 . + . ID=gene1211;Name=SH03_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06070;old_locus_tag=SH03_06065 NZ_CP010441.1 Protein Homology CDS 1235709 1236281 . + 0 ID=cds1167;Parent=gene1211;Dbxref=Genbank:WP_000779842.1;Name=WP_000779842.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000779842.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1236312 1236623 . - . ID=gene1212;Name=SH03_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06075;old_locus_tag=SH03_06070 NZ_CP010441.1 Protein Homology CDS 1236312 1236623 . - 0 ID=cds1168;Parent=gene1212;Dbxref=Genbank:WP_000409911.1;Name=WP_000409911.1;gbkey=CDS;product=methylated-DNA--protein-cysteine methyltransferase;protein_id=WP_000409911.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1237002 1237355 . + . ID=gene1213;Name=SH03_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06080;old_locus_tag=SH03_06075 NZ_CP010441.1 Protein Homology CDS 1237002 1237355 . + 0 ID=cds1169;Parent=gene1213;Dbxref=Genbank:WP_000878140.1;Name=WP_000878140.1;gbkey=CDS;product=DUF1428 domain-containing protein;protein_id=WP_000878140.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1237397 1238947 . - . ID=gene1214;Name=SH03_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06085;old_locus_tag=SH03_06080 NZ_CP010441.1 Protein Homology CDS 1237397 1238947 . - 0 ID=cds1170;Parent=gene1214;Dbxref=Genbank:WP_001310610.1;Name=WP_001310610.1;gbkey=CDS;product=cyclic-di-GMP phosphodiesterase;protein_id=WP_001310610.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1239111 1239581 . - . ID=gene1215;Name=SH03_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06090;old_locus_tag=SH03_06085 NZ_CP010441.1 Protein Homology CDS 1239111 1239581 . - 0 ID=cds1171;Parent=gene1215;Dbxref=Genbank:WP_000136192.1;Name=WP_000136192.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000136192.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1239697 1240248 . - . ID=gene1216;Name=SH03_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06095;old_locus_tag=SH03_06090 NZ_CP010441.1 Protein Homology CDS 1239697 1240248 . - 0 ID=cds1172;Parent=gene1216;Dbxref=Genbank:WP_000102564.1;Name=WP_000102564.1;gbkey=CDS;product=maltose O-acetyltransferase;protein_id=WP_000102564.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1240420 1240638 . - . ID=gene1217;Name=SH03_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06100;old_locus_tag=SH03_06095 NZ_CP010441.1 Protein Homology CDS 1240420 1240638 . - 0 ID=cds1173;Parent=gene1217;Dbxref=Genbank:WP_001290581.1;Name=WP_001290581.1;Note=with Hns involved in transcriptional regulation of hemolysin%3B non-specific DNA-binding protein which affects the production of multiple proteins;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001290581.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1240664 1241038 . - . ID=gene1218;Name=SH03_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06105;old_locus_tag=SH03_06100 NZ_CP010441.1 Protein Homology CDS 1240664 1241038 . - 0 ID=cds1174;Parent=gene1218;Dbxref=Genbank:WP_000344800.1;Name=WP_000344800.1;gbkey=CDS;product=Hha toxicity modulator TomB;protein_id=WP_000344800.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1241584 1244733 . - . ID=gene1219;Name=SH03_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06110;old_locus_tag=SH03_06105 NZ_CP010441.1 Protein Homology CDS 1241584 1244733 . - 0 ID=cds1175;Parent=gene1219;Dbxref=Genbank:WP_001132469.1;Name=WP_001132469.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_001132469.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1244756 1245949 . - . ID=gene1220;Name=SH03_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06115;old_locus_tag=SH03_06110 NZ_CP010441.1 Protein Homology CDS 1244756 1245949 . - 0 ID=cds1176;Parent=gene1220;Dbxref=Genbank:WP_001295324.1;Name=WP_001295324.1;Note=with AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics;gbkey=CDS;product=MexE family multidrug efflux RND transporter periplasmic adaptor subunit;protein_id=WP_001295324.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1246091 1246738 . + . ID=gene1221;Name=SH03_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06120;old_locus_tag=SH03_06115 NZ_CP010441.1 Protein Homology CDS 1246091 1246738 . + 0 ID=cds1177;Parent=gene1221;Dbxref=Genbank:WP_000101737.1;Name=WP_000101737.1;Note=regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000101737.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1246866 1250228 . + . ID=gene1222;Name=SH03_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06125;old_locus_tag=SH03_06120 NZ_CP010441.1 Protein Homology CDS 1246866 1250228 . + 0 ID=cds1178;Parent=gene1222;Dbxref=Genbank:WP_000177732.1;Name=WP_000177732.1;gbkey=CDS;product=mechanosensitive channel MscK;protein_id=WP_000177732.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1250266 1250406 . - . ID=gene1223;Name=SH03_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06130;old_locus_tag=SH03_06125 NZ_CP010441.1 Protein Homology CDS 1250266 1250406 . - 0 ID=cds1179;Parent=gene1223;Dbxref=Genbank:WP_001442340.1;Name=WP_001442340.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001442340.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1250440 1250601 . - . ID=gene1224;Name=SH03_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06135;old_locus_tag=SH03_06130 NZ_CP010441.1 Protein Homology CDS 1250440 1250601 . - 0 ID=cds1180;Parent=gene1224;Dbxref=Genbank:WP_000051153.1;Name=WP_000051153.1;gbkey=CDS;product=DUF2496 domain-containing protein;protein_id=WP_000051153.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1250615 1251142 . - . ID=gene1225;Name=SH03_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06140;old_locus_tag=SH03_06135 NZ_CP010441.1 Protein Homology CDS 1250615 1251142 . - 0 ID=cds1181;Parent=gene1225;Dbxref=Genbank:WP_000844874.1;Name=WP_000844874.1;Note=PriC%3B protein involved in DNA replication%3B part of the primosome%2C a protein complex required to restart stalled replication forks%3B binds the complex formed by PriA%2C PriB and DNA%3B PriC-dependent primosome requires a gap to restart DNA replication%3B stimulates Rep activity at stalled forks;gbkey=CDS;product=primosomal replication protein N'';protein_id=WP_000844874.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1251212 1251589 . + . ID=gene1226;Name=SH03_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06145;old_locus_tag=SH03_06140 NZ_CP010441.1 Protein Homology CDS 1251212 1251589 . + 0 ID=cds1182;Parent=gene1226;Dbxref=Genbank:WP_001188905.1;Name=WP_001188905.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001188905.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1251742 1252293 . + . ID=gene1227;Name=SH03_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06150;old_locus_tag=SH03_06145 NZ_CP010441.1 Protein Homology CDS 1251742 1252293 . + 0 ID=cds1183;Parent=gene1227;Dbxref=Genbank:WP_000127356.1;Name=WP_000127356.1;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;gbkey=CDS;product=adenine phosphoribosyltransferase;protein_id=WP_000127356.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1252422 1254353 . + . ID=gene1228;Name=SH03_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06155;old_locus_tag=SH03_06150 NZ_CP010441.1 Protein Homology CDS 1252422 1254353 . + 0 ID=cds1184;Parent=gene1228;Dbxref=Genbank:WP_000122013.1;Name=WP_000122013.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA;gbkey=CDS;product=DNA polymerase III subunit tau;protein_id=WP_000122013.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1254406 1254735 . + . ID=gene1229;Name=SH03_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06160;old_locus_tag=SH03_06155 NZ_CP010441.1 Protein Homology CDS 1254406 1254735 . + 0 ID=cds1185;Parent=gene1229;Dbxref=Genbank:WP_000467098.1;Name=WP_000467098.1;gbkey=CDS;product=nucleoid-associated protein;protein_id=WP_000467098.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1254735 1255340 . + . ID=gene1230;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=SH03_RS06165;old_locus_tag=SH03_06160 NZ_CP010441.1 Protein Homology CDS 1254735 1255340 . + 0 ID=cds1186;Parent=gene1230;Dbxref=Genbank:WP_001195025.1;Name=WP_001195025.1;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;gbkey=CDS;gene=recR;product=recombination protein RecR;protein_id=WP_001195025.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1255450 1257324 . + . ID=gene1231;Name=SH03_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06170;old_locus_tag=SH03_06165 NZ_CP010441.1 Protein Homology CDS 1255450 1257324 . + 0 ID=cds1187;Parent=gene1231;Dbxref=Genbank:WP_000678201.1;Name=WP_000678201.1;Note=molecular chaperone;gbkey=CDS;product=chaperone protein HtpG;protein_id=WP_000678201.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1257505 1258149 . + . ID=gene1232;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=SH03_RS06175;old_locus_tag=SH03_06170 NZ_CP010441.1 Protein Homology CDS 1257505 1258149 . + 0 ID=cds1188;Parent=gene1232;Dbxref=Genbank:WP_001220233.1;Name=WP_001220233.1;Note=essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP;gbkey=CDS;gene=adk;product=adenylate kinase;protein_id=WP_001220233.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1258385 1259347 . + . ID=gene1233;Name=SH03_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06180;old_locus_tag=SH03_06175 NZ_CP010441.1 Protein Homology CDS 1258385 1259347 . + 0 ID=cds1189;Parent=gene1233;Dbxref=Genbank:WP_001250103.1;Name=WP_001250103.1;gbkey=CDS;product=ferrochelatase;protein_id=WP_001250103.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1259344 1260303 . - . ID=gene1234;Name=SH03_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06185;old_locus_tag=SH03_06180 NZ_CP010441.1 Protein Homology CDS 1259344 1260303 . - 0 ID=cds1190;Parent=gene1234;Dbxref=Genbank:WP_000801813.1;Name=WP_000801813.1;gbkey=CDS;product=acetyl esterase;protein_id=WP_000801813.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1260455 1261759 . + . ID=gene1235;Name=SH03_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06190;old_locus_tag=SH03_06185 NZ_CP010441.1 Protein Homology CDS 1260455 1261759 . + 0 ID=cds1191;Parent=gene1235;Dbxref=Genbank:WP_000671574.1;Name=WP_000671574.1;Note=catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP;gbkey=CDS;product=inosine-guanosine kinase;protein_id=WP_000671574.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1261892 1263568 . - . ID=gene1236;Name=SH03_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06195;old_locus_tag=SH03_06190 NZ_CP010441.1 Protein Homology CDS 1261892 1263568 . - 0 ID=cds1192;Parent=gene1236;Dbxref=Genbank:WP_000546237.1;Name=WP_000546237.1;Note=YbaL%3B member of the CPA-2 family of antiporters%3B uncharacterized protein;gbkey=CDS;product=hypothetical protein;protein_id=WP_000546237.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1263806 1265026 . - . ID=gene1237;Name=SH03_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06200;old_locus_tag=SH03_06195 NZ_CP010441.1 Protein Homology CDS 1263806 1265026 . - 0 ID=cds1193;Parent=gene1237;Dbxref=Genbank:WP_001251608.1;Name=WP_001251608.1;gbkey=CDS;product=fosmidomycin resistance protein;protein_id=WP_001251608.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1265244 1266896 . + . ID=gene1238;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=SH03_RS06205;old_locus_tag=SH03_06200 NZ_CP010441.1 Protein Homology CDS 1265244 1266896 . + 0 ID=cds1194;Parent=gene1238;Dbxref=Genbank:WP_000771748.1;Name=WP_000771748.1;Note=catalyzes the degradation of periplasmic UDP-glucose to uridine%2C glucose-1-phosphate and inorganic phosphate%3B specific for uridine nucleotides;gbkey=CDS;gene=ushA;product=protein UshA;protein_id=WP_000771748.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1266933 1267412 . - . ID=gene1239;Name=SH03_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06210;old_locus_tag=SH03_06205 NZ_CP010441.1 Protein Homology CDS 1266933 1267412 . - 0 ID=cds1195;Parent=gene1239;Dbxref=Genbank:WP_000186631.1;Name=WP_000186631.1;gbkey=CDS;product=cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186631.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1267616 1268410 . - . ID=gene1240;Name=SH03_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06215;old_locus_tag=SH03_06210 NZ_CP010441.1 Protein Homology CDS 1267616 1268410 . - 0 ID=cds1196;Parent=gene1240;Dbxref=Genbank:WP_000365173.1;Name=WP_000365173.1;gbkey=CDS;product=TraB family protein;protein_id=WP_000365173.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1268548 1268889 . + . ID=gene1241;Name=SH03_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06220;old_locus_tag=SH03_06215 NZ_CP010441.1 Protein Homology CDS 1268548 1268889 . + 0 ID=cds1197;Parent=gene1241;Dbxref=Genbank:WP_000806442.1;Name=WP_000806442.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000806442.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1268911 1269148 . + . ID=id81;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1269205 1271709 . - . ID=gene1242;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=SH03_RS06225;old_locus_tag=SH03_06220 NZ_CP010441.1 Protein Homology CDS 1269205 1271709 . - 0 ID=cds1198;Parent=gene1242;Dbxref=Genbank:WP_000083955.1;Name=WP_000083955.1;gbkey=CDS;gene=copA;product=copper-exporting P-type ATPase A;protein_id=WP_000083955.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1271971 1272903 . + . ID=gene1243;Name=SH03_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06230;old_locus_tag=SH03_06225 NZ_CP010441.1 Protein Homology CDS 1271971 1272903 . + 0 ID=cds1199;Parent=gene1243;Dbxref=Genbank:WP_000883034.1;Name=WP_000883034.1;Note=catalyzes the formation of glutamate from glutamine;gbkey=CDS;product=glutaminase 1;protein_id=WP_000883034.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1272906 1274198 . + . ID=gene1244;Name=SH03_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06235;old_locus_tag=SH03_06230 NZ_CP010441.1 Protein Homology CDS 1272906 1274198 . + 0 ID=cds1200;Parent=gene1244;Dbxref=Genbank:WP_000982172.1;Name=WP_000982172.1;gbkey=CDS;product=transporter;protein_id=WP_000982172.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1274323 1274730 . + . ID=gene1245;Name=SH03_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06240;old_locus_tag=SH03_06235 NZ_CP010441.1 Protein Homology CDS 1274323 1274730 . + 0 ID=cds1201;Parent=gene1245;Dbxref=Genbank:WP_001026747.1;Name=WP_001026747.1;Note=activator of copper-responsive regulon genes;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001026747.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1274731 1275189 . - . ID=gene1246;Name=SH03_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06245;old_locus_tag=SH03_06240 NZ_CP010441.1 Protein Homology CDS 1274731 1275189 . - 0 ID=cds1202;Parent=gene1246;Dbxref=Genbank:WP_000970323.1;Name=WP_000970323.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000970323.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1275186 1276103 . - . ID=gene1247;Name=SH03_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06250;old_locus_tag=SH03_06245 NZ_CP010441.1 Protein Homology CDS 1275186 1276103 . - 0 ID=cds1203;Parent=gene1247;Dbxref=Genbank:WP_000904502.1;Name=WP_000904502.1;gbkey=CDS;product=protein QmcA;protein_id=WP_000904502.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1276249 1276926 . + . ID=gene1248;Name=SH03_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06255;old_locus_tag=SH03_06250 NZ_CP010441.1 Protein Homology CDS 1276249 1276926 . + 0 ID=cds1204;Parent=gene1248;Dbxref=Genbank:WP_001157540.1;Name=WP_001157540.1;gbkey=CDS;product=iron export ATP-binding protein FetA;protein_id=WP_001157540.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1276913 1277692 . + . ID=gene1249;Name=SH03_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06260;old_locus_tag=SH03_06255 NZ_CP010441.1 Protein Homology CDS 1276913 1277692 . + 0 ID=cds1205;Parent=gene1249;Dbxref=Genbank:WP_001295323.1;Name=WP_001295323.1;gbkey=CDS;product=iron export permease FetB;protein_id=WP_001295323.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1277755 1278609 . - . ID=gene1250;Name=SH03_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06265;old_locus_tag=SH03_06260 NZ_CP010441.1 Protein Homology CDS 1277755 1278609 . - 0 ID=cds1206;Parent=gene1250;Dbxref=Genbank:WP_001300573.1;Name=WP_001300573.1;gbkey=CDS;product=molecular chaperone DnaK;protein_id=WP_001300573.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1278670 1279440 . - . ID=gene1251;Name=SH03_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06270;old_locus_tag=SH03_06265 NZ_CP010441.1 Protein Homology CDS 1278670 1279440 . - 0 ID=cds1207;Parent=gene1251;Dbxref=Genbank:WP_001298340.1;Name=WP_001298340.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_001298340.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1279469 1280092 . - . ID=gene1252;Name=SH03_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06275;old_locus_tag=SH03_06270 NZ_CP010441.1 Protein Homology CDS 1279469 1280092 . - 0 ID=cds1208;Parent=gene1252;Dbxref=Genbank:WP_001295836.1;Name=WP_001295836.1;gbkey=CDS;product=multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1;protein_id=WP_001295836.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1280063 1280749 . + . ID=gene1253;Name=SH03_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06280;old_locus_tag=SH03_06275 NZ_CP010441.1 Protein Homology CDS 1280063 1280749 . + 0 ID=cds1209;Parent=gene1253;Dbxref=Genbank:WP_001110573.1;Name=WP_001110573.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_001110573.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1280746 1283160 . + . ID=gene1254;Name=SH03_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06285;old_locus_tag=SH03_06280 NZ_CP010441.1 Protein Homology CDS 1280746 1283160 . + 0 ID=cds1210;Parent=gene1254;Dbxref=Genbank:WP_000561872.1;Name=WP_000561872.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_000561872.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1283591 1287871 . + . ID=gene1255;Name=SH03_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06290;old_locus_tag=SH03_06285 NZ_CP010441.1 Protein Homology CDS 1283591 1287871 . + 0 ID=cds1211;Parent=gene1255;Dbxref=Genbank:WP_000014739.1;Name=WP_000014739.1;gbkey=CDS;product=RHS element protein;protein_id=WP_000014739.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1285820 1287327 . + . ID=id82;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1287911 1288279 . + . ID=gene1256;Name=SH03_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06295;old_locus_tag=SH03_06290 NZ_CP010441.1 Protein Homology CDS 1287911 1288279 . + 0 ID=cds1212;Parent=gene1256;Dbxref=Genbank:WP_000877768.1;Name=WP_000877768.1;gbkey=CDS;product=immunity protein;protein_id=WP_000877768.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1288279 1288989 . + . ID=gene1257;Name=SH03_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06300;old_locus_tag=SH03_06295 NZ_CP010441.1 Protein Homology CDS 1288279 1288989 . + 0 ID=cds1213;Parent=gene1257;Dbxref=Genbank:WP_001300714.1;Name=WP_001300714.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001300714.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1288970 1289230 . + . ID=gene1258;Name=SH03_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06305;old_locus_tag=SH03_06300 NZ_CP010441.1 Protein Homology CDS 1288970 1289230 . + 0 ID=cds1214;Parent=gene1258;Dbxref=Genbank:WP_001320180.1;Name=WP_001320180.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001320180.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1289975 1290346 . - . ID=gene1259;Name=SH03_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06310;old_locus_tag=SH03_06305 NZ_CP010441.1 Protein Homology CDS 1289975 1290346 . - 0 ID=cds1215;Parent=gene1259;Dbxref=Genbank:WP_000903287.1;Name=WP_000903287.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000903287.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1290462 1291556 . - . ID=gene1260;Name=SH03_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06315;old_locus_tag=SH03_06310 NZ_CP010441.1 Protein Homology CDS 1290462 1291556 . - 0 ID=cds1216;Parent=gene1260;Dbxref=Genbank:WP_001157938.1;Name=WP_001157938.1;Note=catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA;gbkey=CDS;product=tRNA 2-selenouridine synthase;protein_id=WP_001157938.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1291625 1292551 . - . ID=gene1261;Name=SH03_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06320;old_locus_tag=SH03_06315 NZ_CP010441.1 Protein Homology CDS 1291625 1292551 . - 0 ID=cds1217;Parent=gene1261;Dbxref=Genbank:WP_000460145.1;Name=WP_000460145.1;Note=activator of the allDC-ylbA operon involved in allantoin utilization;gbkey=CDS;product=HTH-type transcriptional activator AllS;protein_id=WP_000460145.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1292781 1293263 . + . ID=gene1262;Name=SH03_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06325;old_locus_tag=SH03_06320 NZ_CP010441.1 Protein Homology CDS 1292781 1293263 . + 0 ID=cds1218;Parent=gene1262;Dbxref=Genbank:WP_000776377.1;Name=WP_000776377.1;gbkey=CDS;product=ureidoglycolate lyase;protein_id=WP_000776377.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1293341 1294156 . + . ID=gene1263;Name=SH03_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06330;old_locus_tag=SH03_06325 NZ_CP010441.1 Protein Homology CDS 1293341 1294156 . + 0 ID=cds1219;Parent=gene1263;Dbxref=Genbank:WP_000141275.1;Name=WP_000141275.1;Note=regulates operons involved in the utilization of allantoin;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000141275.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1294246 1296027 . + . ID=gene1264;Name=SH03_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06335;old_locus_tag=SH03_06330 NZ_CP010441.1 Protein Homology CDS 1294246 1296027 . + 0 ID=cds1220;Parent=gene1264;Dbxref=Genbank:WP_001096881.1;Name=WP_001096881.1;Note=catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate;gbkey=CDS;product=glyoxylate carboligase;protein_id=WP_001096881.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1296040 1296816 . + . ID=gene1265;Name=SH03_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06340;old_locus_tag=SH03_06335 NZ_CP010441.1 Protein Homology CDS 1296040 1296816 . + 0 ID=cds1221;Parent=gene1265;Dbxref=Genbank:WP_000943544.1;Name=WP_000943544.1;gbkey=CDS;product=hydroxypyruvate isomerase;protein_id=WP_000943544.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1296916 1297794 . + . ID=gene1266;Name=SH03_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06345;old_locus_tag=SH03_06340 NZ_CP010441.1 Protein Homology CDS 1296916 1297794 . + 0 ID=cds1222;Parent=gene1266;Dbxref=Genbank:WP_000765839.1;Name=WP_000765839.1;Note=NADH-dependent%3B catalyzed the reversible formation of glycerate from tartronate semialdehyde;gbkey=CDS;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000765839.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1297963 1299417 . + . ID=gene1267;Name=SH03_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06350;old_locus_tag=SH03_06345 NZ_CP010441.1 Protein Homology CDS 1297963 1299417 . + 0 ID=cds1223;Parent=gene1267;Dbxref=Genbank:WP_000401100.1;Name=WP_000401100.1;gbkey=CDS;product=allantoin transporter;protein_id=WP_000401100.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1299477 1300838 . + . ID=gene1268;Name=SH03_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06355;old_locus_tag=SH03_06350 NZ_CP010441.1 Protein Homology CDS 1299477 1300838 . + 0 ID=cds1224;Parent=gene1268;Dbxref=Genbank:WP_000006900.1;Name=WP_000006900.1;Note=Plays a crucial role on both purine and pyrimidine metabolism;gbkey=CDS;product=allantoinase;protein_id=WP_000006900.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1300895 1302196 . + . ID=gene1269;Name=SH03_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06360;old_locus_tag=SH03_06355 NZ_CP010441.1 Protein Homology CDS 1300895 1302196 . + 0 ID=cds1225;Parent=gene1269;Dbxref=Genbank:WP_001302767.1;Name=WP_001302767.1;gbkey=CDS;product=uracil/xanthine transporter;protein_id=WP_001302767.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1302218 1303363 . + . ID=gene1270;Name=SH03_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06365;old_locus_tag=SH03_06360 NZ_CP010441.1 Protein Homology CDS 1302218 1303363 . + 0 ID=cds1226;Parent=gene1270;Dbxref=Genbank:WP_001333621.1;Name=WP_001333621.1;gbkey=CDS;product=glycerate kinase;protein_id=WP_001333621.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1303591 1304376 . - . ID=gene1271;Name=SH03_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06370;old_locus_tag=SH03_06365 NZ_CP010441.1 Protein Homology CDS 1303591 1304376 . - 0 ID=cds1227;Parent=gene1271;Dbxref=Genbank:WP_000540997.1;Name=WP_000540997.1;gbkey=CDS;product=(S)-ureidoglycine aminohydrolase;protein_id=WP_000540997.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1304387 1305622 . - . ID=gene1272;Name=SH03_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06375;old_locus_tag=SH03_06370 NZ_CP010441.1 Protein Homology CDS 1304387 1305622 . - 0 ID=cds1228;Parent=gene1272;Dbxref=Genbank:WP_001310618.1;Name=WP_001310618.1;gbkey=CDS;product=allantoate amidohydrolase;protein_id=WP_001310618.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1305644 1306693 . - . ID=gene1273;Name=SH03_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06380;old_locus_tag=SH03_06375 NZ_CP010441.1 Protein Homology CDS 1305644 1306693 . - 0 ID=cds1229;Parent=gene1273;Dbxref=Genbank:WP_000703900.1;Name=WP_000703900.1;Note=catalyzes the formation of oxalurate from ureidoglycolate;gbkey=CDS;product=ureidoglycolate dehydrogenase (NAD+);protein_id=WP_000703900.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1307010 1308677 . + . ID=gene1274;Name=SH03_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06385;old_locus_tag=SH03_06380 NZ_CP010441.1 Protein Homology CDS 1307010 1308677 . + 0 ID=cds1230;Parent=gene1274;Dbxref=Genbank:WP_000580829.1;Name=WP_000580829.1;Note=multicopy suppressor of dominant negative ftsH mutations%3B putative acyl-CoA synthetase;gbkey=CDS;product=protein FdrA;protein_id=WP_000580829.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1308687 1309946 . + . ID=gene1275;Name=SH03_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06390;old_locus_tag=SH03_06385 NZ_CP010441.1 Protein Homology CDS 1308687 1309946 . + 0 ID=cds1231;Parent=gene1275;Dbxref=Genbank:WP_000495367.1;Name=WP_000495367.1;gbkey=CDS;product=DUF1116 domain-containing protein;protein_id=WP_000495367.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1309957 1310772 . + . ID=gene1276;Name=SH03_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06395;old_locus_tag=SH03_06390 NZ_CP010441.1 Protein Homology CDS 1309957 1310772 . + 0 ID=cds1232;Parent=gene1276;Dbxref=Genbank:WP_000152519.1;Name=WP_000152519.1;gbkey=CDS;product=anaerobic allantoin catabolic oxamate carbamoyltransferase%3B DUF2877 family protein;protein_id=WP_000152519.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1310769 1311662 . + . ID=gene1277;Name=SH03_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06400;old_locus_tag=SH03_06395 NZ_CP010441.1 Protein Homology CDS 1310769 1311662 . + 0 ID=cds1233;Parent=gene1277;Dbxref=Genbank:WP_000855379.1;Name=WP_000855379.1;Note=reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP;gbkey=CDS;product=carbamate kinase;protein_id=WP_000855379.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1311857 1312924 . - . ID=gene1278;Name=SH03_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06405;old_locus_tag=SH03_06400 NZ_CP010441.1 Protein Homology CDS 1311857 1312924 . - 0 ID=cds1234;Parent=gene1278;Dbxref=Genbank:WP_000815571.1;Name=WP_000815571.1;gbkey=CDS;product=N5-carboxyaminoimidazole ribonucleotide synthase;protein_id=WP_000815571.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1312921 1313430 . - . ID=gene1279;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=SH03_RS06410;old_locus_tag=SH03_06405 NZ_CP010441.1 Protein Homology CDS 1312921 1313430 . - 0 ID=cds1235;Parent=gene1279;Dbxref=Genbank:WP_001295318.1;Name=WP_001295318.1;Note=catalyzes the formation of 4-carboxy-5-aminoimidazole ribonucleotide from N5-carboxyaminoimidazole ribonucleotide;gbkey=CDS;gene=purE;product=N5-carboxyaminoimidazole ribonucleotide mutase;protein_id=WP_001295318.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1313548 1314270 . - . ID=gene1280;Name=SH03_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06415;old_locus_tag=SH03_06410 NZ_CP010441.1 Protein Homology CDS 1313548 1314270 . - 0 ID=cds1236;Parent=gene1280;Dbxref=Genbank:WP_000212247.1;Name=WP_000212247.1;Note=catalyzes the formation of 2%2C3%3Ddiacylglucosamine 1-phosphate from UDP-2%2C3%3Ddiacylglucosamine;gbkey=CDS;product=UDP-2%2C3-diacylglucosamine hydrolase;protein_id=WP_000212247.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1314273 1314767 . - . ID=gene1281;Name=SH03_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06420;old_locus_tag=SH03_06415 NZ_CP010441.1 Protein Homology CDS 1314273 1314767 . - 0 ID=cds1237;Parent=gene1281;Dbxref=Genbank:WP_000255997.1;Name=WP_000255997.1;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_000255997.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1314941 1316326 . + . ID=gene1282;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=SH03_RS06425;old_locus_tag=SH03_06420 NZ_CP010441.1 Protein Homology CDS 1314941 1316326 . + 0 ID=cds1238;Parent=gene1282;Dbxref=Genbank:WP_000912385.1;Name=WP_000912385.1;Note=catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=cysS;product=cysteine--tRNA ligase;protein_id=WP_000912385.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1316362 1316883 . - . ID=gene1283;Name=SH03_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06430;old_locus_tag=SH03_06425 NZ_CP010441.1 Protein Homology CDS 1316362 1316883 . - 0 ID=cds1239;Parent=gene1283;Dbxref=Genbank:WP_001143542.1;Name=WP_001143542.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001143542.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1316991 1317203 . - . ID=gene1284;Name=SH03_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06435;old_locus_tag=SH03_06430 NZ_CP010441.1 Protein Homology CDS 1316991 1317203 . - 0 ID=cds1240;Parent=gene1284;Dbxref=Genbank:WP_000190288.1;Name=WP_000190288.1;gbkey=CDS;product=ribosome-associated protein;protein_id=WP_000190288.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1317205 1318071 . - . ID=gene1285;Name=SH03_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06440;old_locus_tag=SH03_06435 NZ_CP010441.1 Protein Homology CDS 1317205 1318071 . - 0 ID=cds1241;Parent=gene1285;Dbxref=Genbank:WP_000729160.1;Name=WP_000729160.1;gbkey=CDS;product=bifunctional protein FolD;protein_id=WP_000729160.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1318542 1319084 . + . ID=gene1286;Name=SH03_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06445;old_locus_tag=SH03_06440 NZ_CP010441.1 Protein Homology CDS 1318542 1319084 . + 0 ID=cds1242;Parent=gene1286;Dbxref=Genbank:WP_000776555.1;Name=WP_000776555.1;gbkey=CDS;product=FimA homolog%2C function unknown;protein_id=WP_000776555.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1319304 1319996 . + . ID=gene1287;Name=SH03_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06450;old_locus_tag=SH03_06445 NZ_CP010441.1 Protein Homology CDS 1319304 1319996 . + 0 ID=cds1243;Parent=gene1287;Dbxref=Genbank:WP_000988364.1;Name=WP_000988364.1;gbkey=CDS;product=fimbrial chaperone SfmC;protein_id=WP_000988364.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1320027 1322630 . + . ID=gene1288;Name=SH03_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06455;old_locus_tag=SH03_06450 NZ_CP010441.1 Protein Homology CDS 1320027 1322630 . + 0 ID=cds1244;Parent=gene1288;Dbxref=Genbank:WP_001333622.1;Name=WP_001333622.1;gbkey=CDS;product=outer membrane usher protein SfmD;protein_id=WP_001333622.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1322672 1323649 . + . ID=gene1289;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=SH03_RS06460;old_locus_tag=SH03_06455 NZ_CP010441.1 Protein Homology CDS 1322672 1323649 . + 0 ID=cds1245;Parent=gene1289;Dbxref=Genbank:WP_001301128.1;Name=WP_001301128.1;Note=involved in the regulation of fimbriae length and mediates adhesion of type 1 fimbriae;gbkey=CDS;gene=fimH;product=adhesin;protein_id=WP_001301128.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1323660 1324175 . + . ID=gene1290;Name=SH03_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06465;old_locus_tag=SH03_06460 NZ_CP010441.1 Protein Homology CDS 1323660 1324175 . + 0 ID=cds1246;Parent=gene1290;Dbxref=Genbank:WP_001255230.1;Name=WP_001255230.1;gbkey=CDS;product=FimA homolog%2C function unknown;protein_id=WP_001255230.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1324178 1324810 . - . ID=gene1291;Name=SH03_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06470;old_locus_tag=SH03_06465 NZ_CP010441.1 Protein Homology CDS 1324178 1324810 . - 0 ID=cds1247;Parent=gene1291;Dbxref=Genbank:WP_000805428.1;Name=WP_000805428.1;Note=activates the production of the major fimbrae protein FimA;gbkey=CDS;product=fimbriae Z protein;protein_id=WP_000805428.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1325053 1325129 . + . ID=gene1292;Name=SH03_RS06475;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS06475;old_locus_tag=SH03_06470 NZ_CP010441.1 tRNAscan-SE tRNA 1325053 1325129 . + . ID=rna44;Parent=gene1292;anticodon=(pos:1325087..1325089);gbkey=tRNA;product=tRNA-Arg NZ_CP010441.1 tRNAscan-SE exon 1325053 1325129 . + . ID=id83;Parent=rna44;anticodon=(pos:1325087..1325089);gbkey=tRNA;product=tRNA-Arg NZ_CP010441.1 RefSeq gene 1325145 1326308 . - . ID=gene1293;Name=SH03_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06480;old_locus_tag=SH03_06475 NZ_CP010441.1 Protein Homology CDS 1325145 1326308 . - 0 ID=cds1248;Parent=gene1293;Dbxref=Genbank:WP_001350488.1;Name=WP_001350488.1;gbkey=CDS;product=integrase;protein_id=WP_001350488.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1326428 1326691 . - . ID=gene1294;Name=SH03_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06485;old_locus_tag=SH03_06480 NZ_CP010441.1 Protein Homology CDS 1326428 1326691 . - 0 ID=cds1249;Parent=gene1294;Dbxref=Genbank:WP_000672150.1;Name=WP_000672150.1;gbkey=CDS;product=exonuclease;protein_id=WP_000672150.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1326781 1327017 . + . ID=gene1295;Name=SH03_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06490;old_locus_tag=SH03_06485 NZ_CP010441.1 Protein Homology CDS 1326781 1327017 . + 0 ID=cds1250;Parent=gene1295;Dbxref=Genbank:WP_000258409.1;Name=WP_000258409.1;gbkey=CDS;product=replication protein;protein_id=WP_000258409.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1327014 1327109 . + . ID=gene1296;Name=SH03_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06495;old_locus_tag=SH03_06490 NZ_CP010441.1 Protein Homology CDS 1327014 1327109 . + 0 ID=cds1251;Parent=gene1296;Dbxref=Genbank:WP_000145909.1;Name=WP_000145909.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000145909.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1327101 1328365 . + . ID=id84;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1327172 1327471 . + . ID=gene1297;Name=SH03_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06500;old_locus_tag=SH03_06495 NZ_CP010441.1 Protein Homology CDS 1327172 1327471 . + 0 ID=cds1252;Parent=gene1297;Dbxref=Genbank:WP_000169527.1;Name=WP_000169527.1;gbkey=CDS;product=transposase;protein_id=WP_000169527.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1327468 1328334 . + . ID=gene1298;Name=SH03_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06505;old_locus_tag=SH03_06500 NZ_CP010441.1 Protein Homology CDS 1327468 1328334 . + 0 ID=cds1253;Parent=gene1298;Dbxref=Genbank:WP_000878218.1;Name=WP_000878218.1;gbkey=CDS;product=transposase;protein_id=WP_000878218.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1328365 1328577 . + . ID=gene1299;Name=SH03_RS06510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS06510;partial=true;pseudo=true;start_range=.,1328365 NZ_CP010441.1 Protein Homology CDS 1328365 1328577 . + 0 ID=cds1254;Parent=gene1299;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=protein ren;pseudo=true;start_range=.,1328365;transl_table=11 NZ_CP010441.1 RefSeq gene 1328645 1328977 . + . ID=gene1300;Name=SH03_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06515;old_locus_tag=SH03_06510 NZ_CP010441.1 Protein Homology CDS 1328645 1328977 . + 0 ID=cds1255;Parent=gene1300;Dbxref=Genbank:WP_001070439.1;Name=WP_001070439.1;gbkey=CDS;product=multidrug SMR transporter;protein_id=WP_001070439.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1329025 1329174 . + . ID=gene1301;Name=SH03_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06520;old_locus_tag=SH03_06515 NZ_CP010441.1 Protein Homology CDS 1329025 1329174 . + 0 ID=cds1256;Parent=gene1301;Dbxref=Genbank:WP_001372443.1;Name=WP_001372443.1;gbkey=CDS;product=membrane protein;protein_id=WP_001372443.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1329232 1330758 . + . ID=gene1302;Name=SH03_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06525;old_locus_tag=SH03_06520 NZ_CP010441.1 Protein Homology CDS 1329232 1330758 . + 0 ID=cds1257;Parent=gene1302;Dbxref=Genbank:WP_000709082.1;Name=WP_000709082.1;gbkey=CDS;product=DLP12 prophage%3B recombinase;protein_id=WP_000709082.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1331223 1331774 . + . ID=gene1303;Name=SH03_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06530;old_locus_tag=SH03_06525 NZ_CP010441.1 Protein Homology CDS 1331223 1331774 . + 0 ID=cds1258;Parent=gene1303;Dbxref=Genbank:WP_001306955.1;Name=WP_001306955.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001306955.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1331784 1332581 . + . ID=gene1304;Name=SH03_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06535;old_locus_tag=SH03_06530 NZ_CP010441.1 Protein Homology CDS 1331784 1332581 . + 0 ID=cds1259;Parent=gene1304;Dbxref=Genbank:WP_000881075.1;Name=WP_000881075.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000881075.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1332796 1333251 . + . ID=gene1305;Name=SH03_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06540;old_locus_tag=SH03_06535 NZ_CP010441.1 Protein Homology CDS 1332796 1333251 . + 0 ID=cds1260;Parent=gene1305;Dbxref=Genbank:WP_001054340.1;Name=WP_001054340.1;Note=DLP12 prophage;gbkey=CDS;product=DLP12 prophage%3B uncharacterized protein;protein_id=WP_001054340.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1333251 1333421 . + . ID=gene1306;Name=SH03_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06545;old_locus_tag=SH03_06540 NZ_CP010441.1 Protein Homology CDS 1333251 1333421 . + 0 ID=cds1261;Parent=gene1306;Dbxref=Genbank:WP_000224915.1;Name=WP_000224915.1;Note=DLP12 prophage%3B conserved protein similar to phage 82 and lambda proteins;gbkey=CDS;product=protein NinE from lambdoid prophage DLP12;protein_id=WP_000224915.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1333414 1333704 . + . ID=gene1307;Name=SH03_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06550;old_locus_tag=SH03_06545 NZ_CP010441.1 Protein Homology CDS 1333414 1333704 . + 0 ID=cds1262;Parent=gene1307;Dbxref=Genbank:WP_000774486.1;Name=WP_000774486.1;gbkey=CDS;product=DLP12 prophage%3B uncharacterized protein;protein_id=WP_000774486.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1333701 1334063 . + . ID=gene1308;Name=SH03_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06555;old_locus_tag=SH03_06550 NZ_CP010441.1 Protein Homology CDS 1333701 1334063 . + 0 ID=cds1263;Parent=gene1308;Dbxref=Genbank:WP_001099712.1;Name=WP_001099712.1;gbkey=CDS;product=crossover junction endodeoxyribonuclease RusA;protein_id=WP_001099712.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1334060 1334200 . + . ID=gene1309;Name=SH03_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06560;old_locus_tag=SH03_06555 NZ_CP010441.1 Protein Homology CDS 1334060 1334200 . + 0 ID=cds1264;Parent=gene1309;Dbxref=Genbank:WP_000971055.1;Name=WP_000971055.1;gbkey=CDS;product=protein%2C DLP12 prophage;protein_id=WP_000971055.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1334286 1334669 . + . ID=gene1310;Name=SH03_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06565;old_locus_tag=SH03_06560 NZ_CP010441.1 Protein Homology CDS 1334286 1334669 . + 0 ID=cds1265;Parent=gene1310;Dbxref=Genbank:WP_001204791.1;Name=WP_001204791.1;gbkey=CDS;product=Antitermination protein Q homolog from lambdoid prophage DLP12;protein_id=WP_001204791.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1334811 1335029 . + . ID=gene1311;Name=SH03_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06570;old_locus_tag=SH03_06565 NZ_CP010441.1 Protein Homology CDS 1334811 1335029 . + 0 ID=cds1266;Parent=gene1311;Dbxref=Genbank:WP_000901484.1;Name=WP_000901484.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000901484.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1334916 1336120 . + . ID=id85;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1335067 1336047 . - . ID=gene1312;Name=SH03_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06575;old_locus_tag=SH03_06570 NZ_CP010441.1 Protein Homology CDS 1335067 1336047 . - 0 ID=cds1267;Parent=gene1312;Dbxref=Genbank:WP_000019403.1;Name=WP_000019403.1;gbkey=CDS;product=transposase;protein_id=WP_000019403.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1336088 1337155 . - . ID=gene1313;Name=SH03_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06580;old_locus_tag=SH03_06575 NZ_CP010441.1 Protein Homology CDS 1336088 1337155 . - 0 ID=cds1268;Parent=gene1313;Dbxref=Genbank:WP_000737282.1;Name=WP_000737282.1;gbkey=CDS;product=porin;protein_id=WP_000737282.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1337728 1337943 . + . ID=gene1314;Name=SH03_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06585;old_locus_tag=SH03_06580 NZ_CP010441.1 Protein Homology CDS 1337728 1337943 . + 0 ID=cds1269;Parent=gene1314;Dbxref=Genbank:WP_000839596.1;Name=WP_000839596.1;gbkey=CDS;product=Lysis protein S homolog from lambdoid prophage DLP12;protein_id=WP_000839596.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1337943 1338440 . + . ID=gene1315;Name=SH03_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06590;old_locus_tag=SH03_06585 NZ_CP010441.1 Protein Homology CDS 1337943 1338440 . + 0 ID=cds1270;Parent=gene1315;Dbxref=Genbank:WP_001135281.1;Name=WP_001135281.1;gbkey=CDS;product=lysozyme RrrD;protein_id=WP_001135281.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1338437 1338898 . + . ID=gene1316;Name=SH03_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06595;old_locus_tag=SH03_06590 NZ_CP010441.1 Protein Homology CDS 1338437 1338898 . + 0 ID=cds1271;Parent=gene1316;Dbxref=Genbank:WP_000092242.1;Name=WP_000092242.1;gbkey=CDS;product=DLP12 prophage%3B murein endopeptidase;protein_id=WP_000092242.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1338461 1338826 . + . ID=id86;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1338930 1339223 . - . ID=gene1317;Name=SH03_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06600;old_locus_tag=SH03_06595 NZ_CP010441.1 Protein Homology CDS 1338930 1339223 . - 0 ID=cds1272;Parent=gene1317;Dbxref=Genbank:WP_000738500.1;Name=WP_000738500.1;gbkey=CDS;product=Lipoprotein bor homolog from lambdoid prophage DLP12;protein_id=WP_000738500.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1339374 1339469 . - . ID=gene1318;Name=SH03_RS06605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS06605;partial=true;pseudo=true;start_range=.,1339374 NZ_CP010441.1 Protein Homology CDS 1339374 1339469 . - 0 ID=cds1273;Parent=gene1318;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1339374;transl_table=11 NZ_CP010441.1 RefSeq gene 1339514 1339924 . - . ID=gene1319;Name=SH03_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06610;old_locus_tag=SH03_06600 NZ_CP010441.1 Protein Homology CDS 1339514 1339924 . - 0 ID=cds1274;Parent=gene1319;Dbxref=Genbank:WP_000079503.1;Name=WP_000079503.1;gbkey=CDS;product=DLP12 prophage%3B uncharacterized protein;protein_id=WP_000079503.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1340210 1340416 . + . ID=gene1320;Name=SH03_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06615;old_locus_tag=SH03_06605 NZ_CP010441.1 Protein Homology CDS 1340210 1340416 . + 0 ID=cds1275;Parent=gene1320;Dbxref=Genbank:WP_001031427.1;Name=WP_001031427.1;gbkey=CDS;product=DLP12 prophage%3B uncharacterized protein;protein_id=WP_001031427.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1340581 1340775 . - . ID=gene1321;Name=SH03_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06620;old_locus_tag=SH03_06610 NZ_CP010441.1 Protein Homology CDS 1340581 1340775 . - 0 ID=cds1276;Parent=gene1321;Dbxref=Genbank:WP_001421937.1;Name=WP_001421937.1;gbkey=CDS;product=DUF3950 domain-containing protein;protein_id=WP_001421937.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1340639 1341692 . + . ID=id87;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1340923 1341024 . + . ID=gene1322;Name=SH03_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06625;old_locus_tag=SH03_06615 NZ_CP010441.1 Protein Homology CDS 1340923 1341024 . + 0 ID=cds1277;Parent=gene1322;Dbxref=Genbank:WP_032143627.1;Name=WP_032143627.1;gbkey=CDS;product=DNA-packaging protein;protein_id=WP_032143627.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1341164 1341709 . + . ID=gene1323;Name=SH03_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06630;old_locus_tag=SH03_06620 NZ_CP010441.1 Protein Homology CDS 1341164 1341709 . + 0 ID=cds1278;Parent=gene1323;Dbxref=Genbank:WP_000453566.1;Name=WP_000453566.1;gbkey=CDS;product=DNA-packaging protein NU1 homolog;protein_id=WP_000453566.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1341684 1342427 . + . ID=gene1324;Name=SH03_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06635;old_locus_tag=SH03_06625 NZ_CP010441.1 Protein Homology CDS 1341684 1342427 . + 0 ID=cds1279;Parent=gene1324;Dbxref=Genbank:WP_001027248.1;Name=WP_001027248.1;gbkey=CDS;product=tail assembly protein;protein_id=WP_001027248.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1341989 1342389 . + . ID=id88;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1342482 1342913 . - . ID=gene1325;Name=SH03_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06640;old_locus_tag=SH03_06630 NZ_CP010441.1 Protein Homology CDS 1342482 1342913 . - 0 ID=cds1280;Parent=gene1325;Dbxref=Genbank:WP_000365231.1;Name=WP_000365231.1;gbkey=CDS;product=SAM-dependent methyltransferase;protein_id=WP_000365231.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1343205 1343465 . + . ID=gene1326;Name=SH03_RS06645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS06645;pseudo=true NZ_CP010441.1 Protein Homology CDS 1343205 1343465 . + 0 ID=cds1281;Parent=gene1326;gbkey=CDS;product=phage tail protein;pseudo=true;transl_except=(pos:1343388..1343390%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq gene 1344011 1344760 . + . ID=gene1327;Name=SH03_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06650;old_locus_tag=SH03_06640 NZ_CP010441.1 Protein Homology CDS 1344011 1344760 . + 0 ID=cds1282;Parent=gene1327;Dbxref=Genbank:WP_000386784.1;Name=WP_000386784.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000386784.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1345010 1345963 . - . ID=gene1328;Name=SH03_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06655;old_locus_tag=SH03_06645 NZ_CP010441.1 Protein Homology CDS 1345010 1345963 . - 0 ID=cds1283;Parent=gene1328;Dbxref=Genbank:WP_001201845.1;Name=WP_001201845.1;gbkey=CDS;product=protease 7;protein_id=WP_001201845.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1346367 1346483 . - . ID=gene1329;Name=SH03_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06660;old_locus_tag=SH03_06650 NZ_CP010441.1 Protein Homology CDS 1346367 1346483 . - 0 ID=cds1284;Parent=gene1329;Dbxref=Genbank:WP_001443680.1;Name=WP_001443680.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001443680.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1346477 1347238 . - . ID=gene1330;Name=SH03_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06665;old_locus_tag=SH03_06655 NZ_CP010441.1 Protein Homology CDS 1346477 1347238 . - 0 ID=cds1285;Parent=gene1330;Dbxref=Genbank:WP_001177471.1;Name=WP_001177471.1;Note=involved in the thermoregulation of ompA%2C ompC%2C lamB and envelope proteins;gbkey=CDS;product=porin thermoregulatory protein EnvY;protein_id=WP_001177471.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1347421 1348311 . - . ID=gene1331;Name=SH03_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06670;old_locus_tag=SH03_06660 NZ_CP010441.1 Protein Homology CDS 1347421 1348311 . - 0 ID=cds1286;Parent=gene1331;Dbxref=Genbank:WP_001224604.1;Name=WP_001224604.1;gbkey=CDS;product=PRK09936 family protein;protein_id=WP_001224604.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1348312 1351284 . - . ID=gene1332;Name=SH03_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06675;old_locus_tag=SH03_06665 NZ_CP010441.1 Protein Homology CDS 1348312 1351284 . - 0 ID=cds1287;Parent=gene1332;Dbxref=Genbank:WP_000662357.1;Name=WP_000662357.1;gbkey=CDS;product=bacteriophage N4 adsorption protein A;protein_id=WP_000662357.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1351271 1353508 . - . ID=gene1333;Name=nfrB;gbkey=Gene;gene=nfrB;gene_biotype=protein_coding;locus_tag=SH03_RS06680;old_locus_tag=SH03_06670 NZ_CP010441.1 Protein Homology CDS 1351271 1353508 . - 0 ID=cds1288;Parent=gene1333;Dbxref=Genbank:WP_000383932.1;Name=WP_000383932.1;gbkey=CDS;gene=nfrB;product=bacteriophage N4 adsorption protein B;protein_id=WP_000383932.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1353658 1355100 . - . ID=gene1334;Name=SH03_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06685;old_locus_tag=SH03_06675 NZ_CP010441.1 Protein Homology CDS 1353658 1355100 . - 0 ID=cds1289;Parent=gene1334;Dbxref=Genbank:WP_000253839.1;Name=WP_000253839.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_000253839.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1355090 1355773 . - . ID=gene1335;Name=SH03_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06690;old_locus_tag=SH03_06680 NZ_CP010441.1 Protein Homology CDS 1355090 1355773 . - 0 ID=cds1290;Parent=gene1335;Dbxref=Genbank:WP_000770953.1;Name=WP_000770953.1;Note=response regulator in two-component regulatory system with CusS%3B regulates the copper efflux system;gbkey=CDS;product=two-component system response regulator;protein_id=WP_000770953.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1355930 1357303 . + . ID=gene1336;Name=SH03_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06695;old_locus_tag=SH03_06685 NZ_CP010441.1 Protein Homology CDS 1355930 1357303 . + 0 ID=cds1291;Parent=gene1336;Dbxref=Genbank:WP_000074234.1;Name=WP_000074234.1;Note=with CusA%2C CusB and CusF is part of a cation efflux system that mediates resistance to copper and silver;gbkey=CDS;product=cation efflux system protein CusC;protein_id=WP_000074234.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1357310 1357437 . + . ID=id89;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1357461 1357793 . + . ID=gene1337;Name=SH03_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06700;old_locus_tag=SH03_06690 NZ_CP010441.1 Protein Homology CDS 1357461 1357793 . + 0 ID=cds1292;Parent=gene1337;Dbxref=Genbank:WP_000709870.1;Name=WP_000709870.1;gbkey=CDS;product=cation efflux system protein CusF;protein_id=WP_000709870.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1357809 1359032 . + . ID=gene1338;Name=SH03_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06705;old_locus_tag=SH03_06695 NZ_CP010441.1 Protein Homology CDS 1357809 1359032 . + 0 ID=cds1293;Parent=gene1338;Dbxref=Genbank:WP_000717157.1;Name=WP_000717157.1;Note=with CusA%2C CusC and CusF is part of a cation efflux system that mediates resistance to copper and silver;gbkey=CDS;product=cation efflux system protein CusB;protein_id=WP_000717157.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1359044 1362187 . + . ID=gene1339;Name=SH03_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06710;old_locus_tag=SH03_06700 NZ_CP010441.1 Protein Homology CDS 1359044 1362187 . + 0 ID=cds1294;Parent=gene1339;Dbxref=Genbank:WP_000573945.1;Name=WP_000573945.1;gbkey=CDS;product=cation efflux system protein CusA;protein_id=WP_000573945.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1362289 1363665 . + . ID=gene1340;Name=SH03_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06715;old_locus_tag=SH03_06705 NZ_CP010441.1 Protein Homology CDS 1362289 1363665 . + 0 ID=cds1295;Parent=gene1340;Dbxref=Genbank:WP_000786319.1;Name=WP_000786319.1;gbkey=CDS;product=phenylalanine-specific permease;protein_id=WP_000786319.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1363746 1364993 . - . ID=gene1341;Name=SH03_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06720;old_locus_tag=SH03_06710 NZ_CP010441.1 Protein Homology CDS 1363746 1364993 . - 0 ID=cds1296;Parent=gene1341;Dbxref=Genbank:WP_001153148.1;Name=WP_001153148.1;gbkey=CDS;product=miniconductance mechanosensitive channel YbdG;protein_id=WP_001153148.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1365101 1365754 . - . ID=gene1342;Name=SH03_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06725;old_locus_tag=SH03_06715 NZ_CP010441.1 Protein Homology CDS 1365101 1365754 . - 0 ID=cds1297;Parent=gene1342;Dbxref=Genbank:WP_000351487.1;Name=WP_000351487.1;Note=catalyzes the reduction of nitroaromatic compounds such as nitrofurazone%2C quinones and the anti-tumor agent CB1954%3B NAD(P)H-dependent%3B oxygen insensitive;gbkey=CDS;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_000351487.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1365848 1366216 . - . ID=gene1343;Name=SH03_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06730;old_locus_tag=SH03_06720 NZ_CP010441.1 Protein Homology CDS 1365848 1366216 . - 0 ID=cds1298;Parent=gene1343;Dbxref=Genbank:WP_000360951.1;Name=WP_000360951.1;gbkey=CDS;product=DUF419 domain-containing protein;protein_id=WP_000360951.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1366281 1366529 . - . ID=gene1344;Name=SH03_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06735;old_locus_tag=SH03_06725 NZ_CP010441.1 Protein Homology CDS 1366281 1366529 . - 0 ID=cds1299;Parent=gene1344;Dbxref=Genbank:WP_000682509.1;Name=WP_000682509.1;gbkey=CDS;product=DUF1158 domain-containing protein;protein_id=WP_000682509.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1366595 1367713 . - . ID=gene1345;Name=SH03_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06740;old_locus_tag=SH03_06730 NZ_CP010441.1 Protein Homology CDS 1366595 1367713 . - 0 ID=cds1300;Parent=gene1345;Dbxref=Genbank:WP_001130654.1;Name=WP_001130654.1;gbkey=CDS;product=weak gamma-glutamyl:cysteine ligase;protein_id=WP_001130654.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1367725 1367874 . + . ID=gene1346;Name=SH03_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06745;old_locus_tag=SH03_06735 NZ_CP010441.1 Protein Homology CDS 1367725 1367874 . + 0 ID=cds1301;Parent=gene1346;Dbxref=Genbank:WP_001324624.1;Name=WP_001324624.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001324624.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1368166 1368318 . + . ID=gene1347;Name=SH03_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06750;old_locus_tag=SH03_06740 NZ_CP010441.1 Protein Homology CDS 1368166 1368318 . + 0 ID=cds1302;Parent=gene1347;Dbxref=Genbank:WP_000956455.1;Name=WP_000956455.1;gbkey=CDS;product=protein HokE;protein_id=WP_000956455.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1368337 1369681 . + . ID=id90;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1368395 1369507 . + . ID=gene1348;Name=SH03_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06755;old_locus_tag=SH03_06745 NZ_CP010441.1 Protein Homology CDS 1368395 1369507 . + 0 ID=cds1303;Parent=gene1348;Dbxref=Genbank:WP_001300563.1;Name=WP_001300563.1;gbkey=CDS;product=transposase;protein_id=WP_001300563.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1369789 1370418 . - . ID=gene1349;Name=SH03_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06760;old_locus_tag=SH03_06750 NZ_CP010441.1 Protein Homology CDS 1369789 1370418 . - 0 ID=cds1304;Parent=gene1349;Dbxref=Genbank:WP_000228136.1;Name=WP_000228136.1;gbkey=CDS;product=4'-phosphopantetheinyl transferase;protein_id=WP_000228136.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1370584 1372824 . - . ID=gene1350;Name=SH03_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06765;old_locus_tag=SH03_06755 NZ_CP010441.1 Protein Homology CDS 1370584 1372824 . - 0 ID=cds1305;Parent=gene1350;Dbxref=Genbank:WP_001034943.1;Name=WP_001034943.1;Note=Fep%3B Cbt%3B Cbr%3B FeuB%3B FepA%3B PfeA%3B IroN%3B BfeA%3B outer membrane receptor of ferric enterobactin and colicins B and D%3B interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space;gbkey=CDS;product=ferrienterobactin receptor;protein_id=WP_001034943.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1373067 1374269 . + . ID=gene1351;Name=SH03_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06770;old_locus_tag=SH03_06760 NZ_CP010441.1 Protein Homology CDS 1373067 1374269 . + 0 ID=cds1306;Parent=gene1351;Dbxref=Genbank:WP_000125843.1;Name=WP_000125843.1;gbkey=CDS;product=enterochelin esterase;protein_id=WP_000125843.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1374272 1374490 . + . ID=gene1352;Name=SH03_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06775;old_locus_tag=SH03_06765 NZ_CP010441.1 Protein Homology CDS 1374272 1374490 . + 0 ID=cds1307;Parent=gene1352;Dbxref=Genbank:WP_000885798.1;Name=WP_000885798.1;gbkey=CDS;product=enterobactin biosynthesis protein YbdZ;protein_id=WP_000885798.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1374487 1378368 . + . ID=gene1353;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=SH03_RS06780;old_locus_tag=SH03_06770 NZ_CP010441.1 Protein Homology CDS 1374487 1378368 . + 0 ID=cds1308;Parent=gene1353;Dbxref=Genbank:WP_000077805.1;Name=WP_000077805.1;Note=with EntB%2C EntD%2C and EntE forms the multienzyme complex enterobactin synthase%3B EntF is the serine activating enzyme which catalyzes the formation of the amide and ester bonds of the cyclic enterobactin;gbkey=CDS;gene=entF;product=enterobactin synthase component F;protein_id=WP_000077805.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1378584 1379717 . + . ID=gene1354;Name=SH03_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06785;old_locus_tag=SH03_06775 NZ_CP010441.1 Protein Homology CDS 1378584 1379717 . + 0 ID=cds1309;Parent=gene1354;Dbxref=Genbank:WP_000096692.1;Name=WP_000096692.1;Note=in Salmonella is responsible for long O-antigen polymerization%3B may be part of the ferric enterobactin transport system%3B necessary for enetrobactin uptake;gbkey=CDS;product=ferric enterobactin transporter FepE;protein_id=WP_000096692.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1379714 1380529 . - . ID=gene1355;Name=SH03_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06790;old_locus_tag=SH03_06780 NZ_CP010441.1 Protein Homology CDS 1379714 1380529 . - 0 ID=cds1310;Parent=gene1355;Dbxref=Genbank:WP_000140647.1;Name=WP_000140647.1;Note=with FepBDE is involved in the transport of ferric enterobactin;gbkey=CDS;product=ferric enterobactin transport ATP-binding protein FepC;protein_id=WP_000140647.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1380526 1381518 . - . ID=gene1356;Name=SH03_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06795;old_locus_tag=SH03_06785 NZ_CP010441.1 Protein Homology CDS 1380526 1381518 . - 0 ID=cds1311;Parent=gene1356;Dbxref=Genbank:WP_000640988.1;Name=WP_000640988.1;Note=with FepBCD is involved in the transport of ferric enterobactin;gbkey=CDS;product=ferric anguibactin ABC transporter permease;protein_id=WP_000640988.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1381515 1382519 . - . ID=gene1357;Name=SH03_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06800;old_locus_tag=SH03_06790 NZ_CP010441.1 Protein Homology CDS 1381515 1382519 . - 0 ID=cds1312;Parent=gene1357;Dbxref=Genbank:WP_000016947.1;Name=WP_000016947.1;Note=with FepBCG is involved in the transport of ferric enterobactin;gbkey=CDS;product=ferric anguibactin ABC transporter permease;protein_id=WP_000016947.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1382630 1383880 . + . ID=gene1358;Name=SH03_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06805;old_locus_tag=SH03_06795 NZ_CP010441.1 Protein Homology CDS 1382630 1383880 . + 0 ID=cds1313;Parent=gene1358;Dbxref=Genbank:WP_001041786.1;Name=WP_001041786.1;Note=protein p43%3B inner membrane protein that exports enterobactin to the periplasmic space%3B member of the major facilitator superfamily (MFS) of transporters;gbkey=CDS;product=enterobactin exporter EntS;protein_id=WP_001041786.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1383884 1384840 . - . ID=gene1359;Name=SH03_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06810;old_locus_tag=SH03_06800 NZ_CP010441.1 Protein Homology CDS 1383884 1384840 . - 0 ID=cds1314;Parent=gene1359;Dbxref=Genbank:WP_001234311.1;Name=WP_001234311.1;Note=with FepCDG is involved in the transport of ferric enterobactin;gbkey=CDS;product=ferrienterobactin-binding periplasmic protein;protein_id=WP_001234311.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1385215 1386390 . + . ID=gene1360;Name=SH03_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06815;old_locus_tag=SH03_06805 NZ_CP010441.1 Protein Homology CDS 1385215 1386390 . + 0 ID=cds1315;Parent=gene1360;Dbxref=Genbank:WP_000381303.1;Name=WP_000381303.1;gbkey=CDS;product=isochorismate synthase EntC;protein_id=WP_000381303.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1386400 1388010 . + . ID=gene1361;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=SH03_RS06820;old_locus_tag=SH03_06810 NZ_CP010441.1 Protein Homology CDS 1386400 1388010 . + 0 ID=cds1316;Parent=gene1361;Dbxref=Genbank:WP_000026812.1;Name=WP_000026812.1;Note=bifunctional 2%2C3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase%3B activates the carboxylate group of 2%2C3-dihydroxy-benzoate forming (2%2C3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2%2C3-dihydroxy-benzoate adenylate;gbkey=CDS;gene=entE;product=enterobactin synthase component E;protein_id=WP_000026812.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1388024 1388881 . + . ID=gene1362;Name=SH03_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06825;old_locus_tag=SH03_06815 NZ_CP010441.1 Protein Homology CDS 1388024 1388881 . + 0 ID=cds1317;Parent=gene1362;Dbxref=Genbank:WP_001007138.1;Name=WP_001007138.1;Note=2%2C3 dihydro-2%2C3 dihydroxybenzoate synthase%3B catalyzes the formation of 2%2C3 dihydro-2%2C3 dihydroxybenzoate and pyruvate from isochorismate%3B with Ent DEF is involved in enterobactin synthesis;gbkey=CDS;product=enterobactin synthase component B;protein_id=WP_001007138.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1388881 1389627 . + . ID=gene1363;Name=SH03_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06830;old_locus_tag=SH03_06820 NZ_CP010441.1 Protein Homology CDS 1388881 1389627 . + 0 ID=cds1318;Parent=gene1363;Dbxref=Genbank:WP_000347651.1;Name=WP_000347651.1;Note=catalyzes the formation of 2%2C3-dihydroxybenzoate from 2%2C3-dihydro-2%2C3-dihydroxybenzoate%3B involved in the biosynthesis of siderophores%2C enterobactin%2C bacillibactin or vibriobactin;gbkey=CDS;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase;protein_id=WP_000347651.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1389630 1390043 . + . ID=gene1364;Name=SH03_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06835;old_locus_tag=SH03_06825 NZ_CP010441.1 Protein Homology CDS 1389630 1390043 . + 0 ID=cds1319;Parent=gene1364;Dbxref=Genbank:WP_000637953.1;Name=WP_000637953.1;Note=required for efficient enterobactin production;gbkey=CDS;product=proofreading thioesterase EntH;protein_id=WP_000637953.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1390224 1392329 . + . ID=gene1365;Name=SH03_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06840;old_locus_tag=SH03_06830 NZ_CP010441.1 Protein Homology CDS 1390224 1392329 . + 0 ID=cds1320;Parent=gene1365;Dbxref=Genbank:WP_001043156.1;Name=WP_001043156.1;gbkey=CDS;product=carbon starvation protein A;protein_id=WP_001043156.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1392512 1392709 . + . ID=gene1366;Name=SH03_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06845;old_locus_tag=SH03_06835 NZ_CP010441.1 Protein Homology CDS 1392512 1392709 . + 0 ID=cds1321;Parent=gene1366;Dbxref=Genbank:WP_000460431.1;Name=WP_000460431.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000460431.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1392719 1393807 . - . ID=gene1367;Name=SH03_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06850;old_locus_tag=SH03_06840 NZ_CP010441.1 Protein Homology CDS 1392719 1393807 . - 0 ID=cds1322;Parent=gene1367;Dbxref=Genbank:WP_001120441.1;Name=WP_001120441.1;Note=member of the iron-containing alcohol dehydrogenase family;gbkey=CDS;product=oxidoreductase;protein_id=WP_001120441.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1393916 1395076 . + . ID=gene1368;Name=SH03_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06855;old_locus_tag=SH03_06845 NZ_CP010441.1 Protein Homology CDS 1393916 1395076 . + 0 ID=cds1323;Parent=gene1368;Dbxref=Genbank:WP_000183907.1;Name=WP_000183907.1;Note=catalyzes the transfer of an amino moiety%3B preference for methionine followed by histidine and phenylalanine;gbkey=CDS;product=methionine aminotransferase;protein_id=WP_000183907.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1395077 1395694 . - . ID=gene1369;Name=SH03_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06860;old_locus_tag=SH03_06850 NZ_CP010441.1 Protein Homology CDS 1395077 1395694 . - 0 ID=cds1324;Parent=gene1369;Dbxref=Genbank:WP_001187469.1;Name=WP_001187469.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001187469.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1395679 1396899 . - . ID=gene1370;Name=SH03_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06865;old_locus_tag=SH03_06855 NZ_CP010441.1 Protein Homology CDS 1395679 1396899 . - 0 ID=cds1325;Parent=gene1370;Dbxref=Genbank:WP_000029814.1;Name=WP_000029814.1;gbkey=CDS;product=PAPS reductase-like domain protein;protein_id=WP_000029814.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1397046 1397948 . - . ID=gene1371;Name=SH03_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06870;old_locus_tag=SH03_06860 NZ_CP010441.1 Protein Homology CDS 1397046 1397948 . - 0 ID=cds1326;Parent=gene1371;Dbxref=Genbank:WP_000002474.1;Name=WP_000002474.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000002474.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1398157 1398903 . - . ID=gene1372;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=SH03_RS06875;old_locus_tag=SH03_06865 NZ_CP010441.1 Protein Homology CDS 1398157 1398903 . - 0 ID=cds1327;Parent=gene1372;Dbxref=Genbank:WP_000913829.1;Name=WP_000913829.1;Note=Involved in disulfide bond formation;gbkey=CDS;gene=dsbG;product=thiol:disulfide interchange protein DsbG;protein_id=WP_000913829.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1399275 1399838 . + . ID=gene1373;Name=SH03_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06880;old_locus_tag=SH03_06870 NZ_CP010441.1 Protein Homology CDS 1399275 1399838 . + 0 ID=cds1328;Parent=gene1373;Dbxref=Genbank:WP_000052796.1;Name=WP_000052796.1;Note=with AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols%3B AhpC reduced the hydroperoxide substrate;gbkey=CDS;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052796.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1400083 1401648 . + . ID=gene1374;Name=SH03_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06885;old_locus_tag=SH03_06875 NZ_CP010441.1 Protein Homology CDS 1400083 1401648 . + 0 ID=cds1329;Parent=gene1374;Dbxref=Genbank:WP_000887629.1;Name=WP_000887629.1;gbkey=CDS;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000887629.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1401769 1402197 . - . ID=gene1375;Name=SH03_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06890;old_locus_tag=SH03_06880 NZ_CP010441.1 Protein Homology CDS 1401769 1402197 . - 0 ID=cds1330;Parent=gene1375;Dbxref=Genbank:WP_000278509.1;Name=WP_000278509.1;Note=interacts with GroEL%3B is induced by starvation%2C heat shock and toxic agents;gbkey=CDS;product=universal stress protein G;protein_id=WP_000278509.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1402418 1403656 . + . ID=gene1376;Name=SH03_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06895;old_locus_tag=SH03_06885 NZ_CP010441.1 Protein Homology CDS 1402418 1403656 . + 0 ID=cds1331;Parent=gene1376;Dbxref=Genbank:WP_000646173.1;Name=WP_000646173.1;gbkey=CDS;product=Zn-dependent NAD(P)-binding oxidoreductase;protein_id=WP_000646173.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1403660 1403848 . - . ID=gene1377;Name=SH03_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06900 NZ_CP010441.1 Protein Homology CDS 1403660 1403848 . - 0 ID=cds1332;Parent=gene1377;Dbxref=Genbank:WP_001301130.1;Name=WP_001301130.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001301130.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1403887 1404297 . - . ID=gene1378;Name=SH03_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06905;old_locus_tag=SH03_06895 NZ_CP010441.1 Protein Homology CDS 1403887 1404297 . - 0 ID=cds1333;Parent=gene1378;Dbxref=Genbank:WP_000089731.1;Name=WP_000089731.1;Note=Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis%2C CTP for lipid synthesis%2C and GTP for protein elongation;gbkey=CDS;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089731.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1404527 1405333 . - . ID=gene1379;Name=SH03_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06910;old_locus_tag=SH03_06900 NZ_CP010441.1 Protein Homology CDS 1404527 1405333 . - 0 ID=cds1334;Parent=gene1379;Dbxref=Genbank:WP_000643397.1;Name=WP_000643397.1;gbkey=CDS;product=ribonuclease I;protein_id=WP_000643397.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1405447 1406910 . - . ID=gene1380;Name=SH03_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06915;old_locus_tag=SH03_06905 NZ_CP010441.1 Protein Homology CDS 1405447 1406910 . - 0 ID=cds1335;Parent=gene1380;Dbxref=Genbank:WP_000050323.1;Name=WP_000050323.1;Note=involved in the transport of citrate into the cell along with the export of succinate out of the cell;gbkey=CDS;product=citrate carrier;protein_id=WP_000050323.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1406961 1407839 . - . ID=gene1381;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=SH03_RS06920;old_locus_tag=SH03_06910 NZ_CP010441.1 Protein Homology CDS 1406961 1407839 . - 0 ID=cds1336;Parent=gene1381;Dbxref=Genbank:WP_000062457.1;Name=WP_000062457.1;Note=catalyzes the formation of 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA from ATP and 3-dephospho-CoA;gbkey=CDS;gene=citG;product=2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase;protein_id=WP_000062457.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1407814 1408365 . - . ID=gene1382;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=SH03_RS06925;old_locus_tag=SH03_06915 NZ_CP010441.1 Protein Homology CDS 1407814 1408365 . - 0 ID=cds1337;Parent=gene1382;Dbxref=Genbank:WP_000550422.1;Name=WP_000550422.1;Note=2'-(5''-phosphoribosyl)-3'-dephospho-CoA transferase%3B holo-citrate lyase synthase%3B CitG forms the prosthetic group precursor 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA which is then transferred to apo-ACP by CitX to produce holo-ACP and pyrophosphate;gbkey=CDS;gene=citX;product=apo-citrate lyase phosphoribosyl-dephospho-CoA transferase;protein_id=WP_000550422.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1408369 1409901 . - . ID=gene1383;Name=SH03_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06930;old_locus_tag=SH03_06920 NZ_CP010441.1 Protein Homology CDS 1408369 1409901 . - 0 ID=cds1338;Parent=gene1383;Dbxref=Genbank:WP_000192242.1;Name=WP_000192242.1;Note=citrate-ACP transferase%2C the alpha subunit catalyzes the formation of (3S)-citryl-CoA from acetyl-CoA and citrate;gbkey=CDS;product=citrate lyase alpha chain;protein_id=WP_000192242.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1409912 1410820 . - . ID=gene1384;Name=SH03_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06935;old_locus_tag=SH03_06925 NZ_CP010441.1 Protein Homology CDS 1409912 1410820 . - 0 ID=cds1339;Parent=gene1384;Dbxref=Genbank:WP_000622357.1;Name=WP_000622357.1;Note=citryl-ACP lyase%3B catalyzes the formation of acetate and oxaloacetate from citrate;gbkey=CDS;product=citrate lyase subunit beta;protein_id=WP_000622357.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1410817 1411113 . - . ID=gene1385;Name=SH03_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06940;old_locus_tag=SH03_06930 NZ_CP010441.1 Protein Homology CDS 1410817 1411113 . - 0 ID=cds1340;Parent=gene1385;Dbxref=Genbank:WP_000700703.1;Name=WP_000700703.1;gbkey=CDS;product=citrate lyase ACP;protein_id=WP_000700703.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1411128 1412186 . - . ID=gene1386;Name=SH03_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06945;old_locus_tag=SH03_06935 NZ_CP010441.1 Protein Homology CDS 1411128 1412186 . - 0 ID=cds1341;Parent=gene1386;Dbxref=Genbank:WP_000467705.1;Name=WP_000467705.1;Note=activates citrate lyase by acetylation of the gamma subunit;gbkey=CDS;product=[Citrate [pro-3S]-lyase] ligase;protein_id=WP_000467705.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1412565 1414223 . + . ID=gene1387;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;gene_synonym=citA;locus_tag=SH03_RS06950;old_locus_tag=SH03_06940 NZ_CP010441.1 Protein Homology CDS 1412565 1414223 . + 0 ID=cds1342;Parent=gene1387;Dbxref=Genbank:WP_000939767.1;Name=WP_000939767.1;Note=regulates the expression of citrate fermentation genes;gbkey=CDS;gene=dpiB;product=sensor histidine kinase;protein_id=WP_000939767.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1414192 1414872 . + . ID=gene1388;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=SH03_RS06955;old_locus_tag=SH03_06945 NZ_CP010441.1 Protein Homology CDS 1414192 1414872 . + 0 ID=cds1343;Parent=gene1388;Dbxref=Genbank:WP_000126500.1;Name=WP_000126500.1;Note=regulates the expression of citrate fermentation genes;gbkey=CDS;gene=dpiA;product=transcriptional regulator;protein_id=WP_000126500.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1414913 1416298 . - . ID=gene1389;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=SH03_RS06960;old_locus_tag=SH03_06950 NZ_CP010441.1 Protein Homology CDS 1414913 1416298 . - 0 ID=cds1344;Parent=gene1389;Dbxref=Genbank:WP_000955063.1;Name=WP_000955063.1;Note=responsible for the transport of C4-dicarboxylates during anaerobic growth;gbkey=CDS;gene=dcuC;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000955063.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1416887 1417447 . + . ID=gene1390;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=SH03_RS06965;old_locus_tag=SH03_06955 NZ_CP010441.1 Protein Homology CDS 1416887 1417447 . + 0 ID=cds1345;Parent=gene1390;Dbxref=Genbank:WP_001103094.1;Name=WP_001103094.1;Note=catalyzes the transfer of palmitate to lipid A;gbkey=CDS;gene=pagP;product=lipid A palmitoyltransferase PagP;protein_id=WP_001103094.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1417622 1417831 . + . ID=gene1391;Name=SH03_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06970;old_locus_tag=SH03_06960 NZ_CP010441.1 Protein Homology CDS 1417622 1417831 . + 0 ID=cds1346;Parent=gene1391;Dbxref=Genbank:WP_000034825.1;Name=WP_000034825.1;gbkey=CDS;product=cold-shock protein CspE;protein_id=WP_000034825.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1417885 1418268 . - . ID=gene1392;Name=SH03_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06975;old_locus_tag=SH03_06965 NZ_CP010441.1 Protein Homology CDS 1417885 1418268 . - 0 ID=cds1347;Parent=gene1392;Dbxref=Genbank:WP_000939747.1;Name=WP_000939747.1;Note=camphor resistance protein CrcB%3B may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;gbkey=CDS;product=fluoride efflux channel%2C dual topology membrane protein;protein_id=WP_000939747.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1418361 1419148 . + . ID=gene1393;Name=SH03_RS06980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS06980;pseudo=true NZ_CP010441.1 Protein Homology CDS 1418361 1419148 . + 0 ID=cds1348;Parent=gene1393;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hydrolase;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 1419277 1419480 . + . ID=gene1394;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=SH03_RS06985;old_locus_tag=SH03_06975 NZ_CP010441.1 Protein Homology CDS 1419277 1419480 . + 0 ID=cds1349;Parent=gene1394;Dbxref=Genbank:WP_000503931.1;Name=WP_000503931.1;Note=TatE%3B similar to TatA and found in some proteobacteria%3B part of system that translocates proteins with a conserved twin arginine motif across the inner membrane%3B capable of translocating folded substrates typically those with bound cofactors%3B similar to a protein import system in thylakoid membranes;gbkey=CDS;gene=tatE;product=preprotein translocase subunit TatE;protein_id=WP_000503931.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1419581 1420546 . - . ID=gene1395;Name=SH03_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06990;old_locus_tag=SH03_06980 NZ_CP010441.1 Protein Homology CDS 1419581 1420546 . - 0 ID=cds1350;Parent=gene1395;Dbxref=Genbank:WP_000042632.1;Name=WP_000042632.1;Note=catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group;gbkey=CDS;product=lipoyl synthase;protein_id=WP_000042632.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1420755 1421708 . - . ID=gene1396;Name=SH03_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS06995;old_locus_tag=SH03_06985 NZ_CP010441.1 Protein Homology CDS 1420755 1421708 . - 0 ID=cds1351;Parent=gene1396;Dbxref=Genbank:WP_000378026.1;Name=WP_000378026.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_000378026.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1421766 1421915 . + . ID=gene1397;Name=SH03_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07000;old_locus_tag=SH03_06990 NZ_CP010441.1 Protein Homology CDS 1421766 1421915 . + 0 ID=cds1352;Parent=gene1397;Dbxref=Genbank:WP_000073523.1;Name=WP_000073523.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000073523.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1421967 1422608 . - . ID=gene1398;Name=SH03_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07005;old_locus_tag=SH03_06995 NZ_CP010441.1 Protein Homology CDS 1421967 1422608 . - 0 ID=cds1353;Parent=gene1398;Dbxref=Genbank:WP_000284027.1;Name=WP_000284027.1;Note=lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein;gbkey=CDS;product=octanoyltransferase;protein_id=WP_000284027.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1422709 1422972 . - . ID=gene1399;Name=SH03_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07010;old_locus_tag=SH03_07000 NZ_CP010441.1 Protein Homology CDS 1422709 1422972 . - 0 ID=cds1354;Parent=gene1399;Dbxref=Genbank:WP_000850550.1;Name=WP_000850550.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000850550.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1423082 1424293 . - . ID=gene1400;Name=SH03_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07015;old_locus_tag=SH03_07005 NZ_CP010441.1 Protein Homology CDS 1423082 1424293 . - 0 ID=cds1355;Parent=gene1400;Dbxref=Genbank:WP_001092082.1;Name=WP_001092082.1;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_001092082.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1424432 1425520 . - . ID=gene1401;Name=SH03_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07020;old_locus_tag=SH03_07010 NZ_CP010441.1 Protein Homology CDS 1424432 1425520 . - 0 ID=cds1356;Parent=gene1401;Dbxref=Genbank:WP_001231430.1;Name=WP_001231430.1;Note=septal ring protein%2C suppressor of prc%2C minor lipoprotein;gbkey=CDS;product=hypothetical protein;protein_id=WP_001231430.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1425531 1426643 . - . ID=gene1402;Name=SH03_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07025;old_locus_tag=SH03_07015 NZ_CP010441.1 Protein Homology CDS 1425531 1426643 . - 0 ID=cds1357;Parent=gene1402;Dbxref=Genbank:WP_000131719.1;Name=WP_000131719.1;gbkey=CDS;product=rod shape-determining protein RodA;protein_id=WP_000131719.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1426646 1428547 . - . ID=gene1403;Name=SH03_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07030;old_locus_tag=SH03_07020 NZ_CP010441.1 Protein Homology CDS 1426646 1428547 . - 0 ID=cds1358;Parent=gene1403;Dbxref=Genbank:WP_000776191.1;Name=WP_000776191.1;gbkey=CDS;product=penicillin-binding protein 2;protein_id=WP_000776191.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1428578 1429045 . - . ID=gene1404;Name=SH03_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07035;old_locus_tag=SH03_07025 NZ_CP010441.1 Protein Homology CDS 1428578 1429045 . - 0 ID=cds1359;Parent=gene1404;Dbxref=Genbank:WP_000776104.1;Name=WP_000776104.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase H;protein_id=WP_000776104.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1429049 1429366 . - . ID=gene1405;Name=SH03_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07040;old_locus_tag=SH03_07030 NZ_CP010441.1 Protein Homology CDS 1429049 1429366 . - 0 ID=cds1360;Parent=gene1405;Dbxref=Genbank:WP_001161664.1;Name=WP_001161664.1;gbkey=CDS;product=ribosome silencing factor RsfS;protein_id=WP_001161664.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1429626 1430237 . - . ID=gene1406;Name=SH03_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07045;old_locus_tag=SH03_07035 NZ_CP010441.1 Protein Homology CDS 1429626 1430237 . - 0 ID=cds1361;Parent=gene1406;Dbxref=Genbank:WP_001241872.1;Name=WP_001241872.1;gbkey=CDS;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_001241872.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1430261 1430902 . - . ID=gene1407;Name=SH03_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07050;old_locus_tag=SH03_07040 NZ_CP010441.1 Protein Homology CDS 1430261 1430902 . - 0 ID=cds1362;Parent=gene1407;Dbxref=Genbank:WP_000838889.1;Name=WP_000838889.1;gbkey=CDS;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_000838889.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1430904 1431935 . - . ID=gene1408;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=SH03_RS07055;old_locus_tag=SH03_07045 NZ_CP010441.1 Protein Homology CDS 1430904 1431935 . - 0 ID=cds1363;Parent=gene1408;Dbxref=Genbank:WP_000620535.1;Name=WP_000620535.1;Note=required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA;gbkey=CDS;gene=holA;product=DNA polymerase III subunit delta;protein_id=WP_000620535.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1431935 1432516 . - . ID=gene1409;Name=SH03_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07060;old_locus_tag=SH03_07050 NZ_CP010441.1 Protein Homology CDS 1431935 1432516 . - 0 ID=cds1364;Parent=gene1409;Dbxref=Genbank:WP_001269673.1;Name=WP_001269673.1;Note=rare lipoprotein B%3B involved in the assembly of LPS in the outer membrane;gbkey=CDS;product=hypothetical protein;protein_id=WP_001269673.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1432531 1435113 . - . ID=gene1410;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=SH03_RS07065;old_locus_tag=SH03_07055 NZ_CP010441.1 Protein Homology CDS 1432531 1435113 . - 0 ID=cds1365;Parent=gene1410;Dbxref=Genbank:WP_001340834.1;Name=WP_001340834.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;gbkey=CDS;gene=leuS;product=leucine--tRNA ligase;protein_id=WP_001340834.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1435348 1435830 . + . ID=gene1411;Name=SH03_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07070;old_locus_tag=SH03_07060 NZ_CP010441.1 Protein Homology CDS 1435348 1435830 . + 0 ID=cds1366;Parent=gene1411;Dbxref=Genbank:WP_001044880.1;Name=WP_001044880.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001044880.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1435900 1436877 . - . ID=gene1412;Name=SH03_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07075;old_locus_tag=SH03_07065 NZ_CP010441.1 Protein Homology CDS 1435900 1436877 . - 0 ID=cds1367;Parent=gene1412;Dbxref=Genbank:WP_000578178.1;Name=WP_000578178.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000578178.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1437041 1437748 . + . ID=gene1413;Name=SH03_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07080;old_locus_tag=SH03_07070 NZ_CP010441.1 Protein Homology CDS 1437041 1437748 . + 0 ID=cds1368;Parent=gene1413;Dbxref=Genbank:WP_000367023.1;Name=WP_000367023.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000367023.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1437745 1439172 . + . ID=gene1414;Name=SH03_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07085;old_locus_tag=SH03_07075 NZ_CP010441.1 Protein Homology CDS 1437745 1439172 . + 0 ID=cds1369;Parent=gene1414;Dbxref=Genbank:WP_000786572.1;Name=WP_000786572.1;gbkey=CDS;product=HscC co-chaperone%2C uncharacterized J domain-containing protein;protein_id=WP_000786572.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1439182 1439736 . - . ID=gene1415;Name=SH03_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07090;old_locus_tag=SH03_07080 NZ_CP010441.1 Protein Homology CDS 1439182 1439736 . - 0 ID=cds1370;Parent=gene1415;Dbxref=Genbank:WP_001035674.1;Name=WP_001035674.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001035674.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1439838 1440545 . + . ID=gene1416;Name=SH03_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07095;old_locus_tag=SH03_07085 NZ_CP010441.1 Protein Homology CDS 1439838 1440545 . + 0 ID=cds1371;Parent=gene1416;Dbxref=Genbank:WP_001030934.1;Name=WP_001030934.1;gbkey=CDS;product=DUF1266 domain-containing protein;protein_id=WP_001030934.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1440542 1441993 . + . ID=gene1417;Name=SH03_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07100;old_locus_tag=SH03_07090 NZ_CP010441.1 Protein Homology CDS 1440542 1441993 . + 0 ID=cds1372;Parent=gene1417;Dbxref=Genbank:WP_001300403.1;Name=WP_001300403.1;gbkey=CDS;product=J domain-containing HscC co-chaperone%3B Hsc56;protein_id=WP_001300403.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1442053 1443723 . - . ID=gene1418;Name=SH03_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07105;old_locus_tag=SH03_07095 NZ_CP010441.1 Protein Homology CDS 1442053 1443723 . - 0 ID=cds1373;Parent=gene1418;Dbxref=Genbank:WP_000367875.1;Name=WP_000367875.1;gbkey=CDS;product=chaperone protein HscC;protein_id=WP_000367875.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1443807 1444742 . - . ID=gene1419;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=SH03_RS07110;old_locus_tag=SH03_07100 NZ_CP010441.1 Protein Homology CDS 1443807 1444742 . - 0 ID=cds1374;Parent=gene1419;Dbxref=Genbank:WP_001207520.1;Name=WP_001207520.1;Note=Hydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil%2C respectively%3B pyrimidine-specific;gbkey=CDS;gene=rihA;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_001207520.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1444860 1445585 . - . ID=gene1420;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=SH03_RS07115;old_locus_tag=SH03_07105 NZ_CP010441.1 Protein Homology CDS 1444860 1445585 . - 0 ID=cds1375;Parent=gene1420;Dbxref=Genbank:WP_000631384.1;Name=WP_000631384.1;Note=With ArtMQJI transports arginine across the inner membrane;gbkey=CDS;gene=artP;product=glutamate/aspartate transport ATP-binding protein GltL;protein_id=WP_000631384.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1445585 1446259 . - . ID=gene1421;Name=SH03_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07120;old_locus_tag=SH03_07110 NZ_CP010441.1 Protein Homology CDS 1445585 1446259 . - 0 ID=cds1376;Parent=gene1421;Dbxref=Genbank:WP_000272824.1;Name=WP_000272824.1;Note=with GltJLPS and GadC for glutamate and GltJLP%2C DctA and DcuAB for aspartate is involved in the transport of glutamate and aspartate;gbkey=CDS;product=glutamate ABC transporter permease;protein_id=WP_000272824.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1446259 1446999 . - . ID=gene1422;Name=SH03_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07125;old_locus_tag=SH03_07115 NZ_CP010441.1 Protein Homology CDS 1446259 1446999 . - 0 ID=cds1377;Parent=gene1422;Dbxref=Genbank:WP_000020941.1;Name=WP_000020941.1;Note=with GltIKL is involved in the transport of glutamate and aspartate;gbkey=CDS;product=glutamate ABC transporter permease;protein_id=WP_000020941.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1447169 1448077 . - . ID=gene1423;Name=SH03_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07130;old_locus_tag=SH03_07120 NZ_CP010441.1 Protein Homology CDS 1447169 1448077 . - 0 ID=cds1378;Parent=gene1423;Dbxref=Genbank:WP_001177086.1;Name=WP_001177086.1;gbkey=CDS;product=glutamate/aspartate periplasmic-binding protein;protein_id=WP_001177086.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1448174 1449381 . + . ID=id91;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1448327 1449307 . - . ID=gene1424;Name=SH03_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07135;old_locus_tag=SH03_07125 NZ_CP010441.1 Protein Homology CDS 1448327 1449307 . - 0 ID=cds1379;Parent=gene1424;Dbxref=Genbank:WP_000019403.1;Name=WP_000019403.1;gbkey=CDS;product=transposase;protein_id=WP_000019403.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1449673 1451211 . - . ID=gene1425;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=SH03_RS07140;old_locus_tag=SH03_07130 NZ_CP010441.1 Protein Homology CDS 1449673 1451211 . - 0 ID=cds1380;Parent=gene1425;Dbxref=Genbank:WP_000853021.1;Name=WP_000853021.1;Note=Transfers the fatty acyl group on membrane lipoproteins;gbkey=CDS;gene=lnt;product=apolipoprotein N-acyltransferase;protein_id=WP_000853021.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1451236 1452114 . - . ID=gene1426;Name=SH03_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07145;old_locus_tag=SH03_07135 NZ_CP010441.1 Protein Homology CDS 1451236 1452114 . - 0 ID=cds1381;Parent=gene1426;Dbxref=Genbank:WP_001278605.1;Name=WP_001278605.1;Note=involved in the transport of magnesium and cobalt ions;gbkey=CDS;product=magnesium and cobalt efflux protein CorC;protein_id=WP_001278605.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1452204 1452671 . - . ID=gene1427;Name=SH03_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07150;old_locus_tag=SH03_07140 NZ_CP010441.1 Protein Homology CDS 1452204 1452671 . - 0 ID=cds1382;Parent=gene1427;Dbxref=Genbank:WP_000084469.1;Name=WP_000084469.1;gbkey=CDS;product=endoribonuclease YbeY;protein_id=WP_000084469.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1452668 1453708 . - . ID=gene1428;Name=SH03_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07155;old_locus_tag=SH03_07145 NZ_CP010441.1 Protein Homology CDS 1452668 1453708 . - 0 ID=cds1383;Parent=gene1428;Dbxref=Genbank:WP_001018040.1;Name=WP_001018040.1;gbkey=CDS;product=phoH-like protein;protein_id=WP_001018040.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1453861 1455285 . - . ID=gene1429;Name=SH03_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07160;old_locus_tag=SH03_07150 NZ_CP010441.1 Protein Homology CDS 1453861 1455285 . - 0 ID=cds1384;Parent=gene1429;Dbxref=Genbank:WP_000162740.1;Name=WP_000162740.1;Note=catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A);gbkey=CDS;product=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase;protein_id=WP_000162740.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1455431 1456606 . + . ID=gene1430;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;gene_synonym=yleB;locus_tag=SH03_RS07165;old_locus_tag=SH03_07155 NZ_CP010441.1 Protein Homology CDS 1455431 1456606 . + 0 ID=cds1385;Parent=gene1430;Dbxref=Genbank:WP_000184541.1;Name=WP_000184541.1;Note=catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol%3B functions in the biosynthesis of ubiquinone or coenzyme Q;gbkey=CDS;gene=ubiF;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;protein_id=WP_000184541.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1456760 1456834 . - . ID=gene1431;Name=SH03_RS07170;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS07170;old_locus_tag=SH03_07160 NZ_CP010441.1 tRNAscan-SE tRNA 1456760 1456834 . - . ID=rna45;Parent=gene1431;anticodon=(pos:complement(1456800..1456802));gbkey=tRNA;product=tRNA-Gln NZ_CP010441.1 tRNAscan-SE exon 1456760 1456834 . - . ID=id92;Parent=rna45;anticodon=(pos:complement(1456800..1456802));gbkey=tRNA;product=tRNA-Gln NZ_CP010441.1 RefSeq gene 1456872 1456946 . - . ID=gene1432;Name=SH03_RS07175;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS07175;old_locus_tag=SH03_07165 NZ_CP010441.1 tRNAscan-SE tRNA 1456872 1456946 . - . ID=rna46;Parent=gene1432;anticodon=(pos:complement(1456912..1456914));gbkey=tRNA;product=tRNA-Gln NZ_CP010441.1 tRNAscan-SE exon 1456872 1456946 . - . ID=id93;Parent=rna46;anticodon=(pos:complement(1456912..1456914));gbkey=tRNA;product=tRNA-Gln NZ_CP010441.1 RefSeq gene 1456994 1457070 . - . ID=gene1433;Name=SH03_RS07180;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS07180;old_locus_tag=SH03_07170 NZ_CP010441.1 tRNAscan-SE tRNA 1456994 1457070 . - . ID=rna47;Parent=gene1433;anticodon=(pos:complement(1457034..1457036));gbkey=tRNA;product=tRNA-Met NZ_CP010441.1 tRNAscan-SE exon 1456994 1457070 . - . ID=id94;Parent=rna47;anticodon=(pos:complement(1457034..1457036));gbkey=tRNA;product=tRNA-Met NZ_CP010441.1 RefSeq gene 1457086 1457160 . - . ID=gene1434;Name=SH03_RS07185;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS07185;old_locus_tag=SH03_07175 NZ_CP010441.1 tRNAscan-SE tRNA 1457086 1457160 . - . ID=rna48;Parent=gene1434;anticodon=(pos:complement(1457126..1457128));gbkey=tRNA;product=tRNA-Gln NZ_CP010441.1 tRNAscan-SE exon 1457086 1457160 . - . ID=id95;Parent=rna48;anticodon=(pos:complement(1457126..1457128));gbkey=tRNA;product=tRNA-Gln NZ_CP010441.1 RefSeq gene 1457195 1457269 . - . ID=gene1435;Name=SH03_RS07190;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS07190;old_locus_tag=SH03_07180 NZ_CP010441.1 tRNAscan-SE tRNA 1457195 1457269 . - . ID=rna49;Parent=gene1435;anticodon=(pos:complement(1457235..1457237));gbkey=tRNA;product=tRNA-Gln NZ_CP010441.1 tRNAscan-SE exon 1457195 1457269 . - . ID=id96;Parent=rna49;anticodon=(pos:complement(1457235..1457237));gbkey=tRNA;product=tRNA-Gln NZ_CP010441.1 RefSeq gene 1457293 1457377 . - . ID=gene1436;Name=SH03_RS07195;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS07195;old_locus_tag=SH03_07185 NZ_CP010441.1 tRNAscan-SE tRNA 1457293 1457377 . - . ID=rna50;Parent=gene1436;anticodon=(pos:complement(1457341..1457343));gbkey=tRNA;product=tRNA-Leu NZ_CP010441.1 tRNAscan-SE exon 1457293 1457377 . - . ID=id97;Parent=rna50;anticodon=(pos:complement(1457341..1457343));gbkey=tRNA;product=tRNA-Leu NZ_CP010441.1 RefSeq gene 1457387 1457463 . - . ID=gene1437;Name=SH03_RS07200;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS07200;old_locus_tag=SH03_07190 NZ_CP010441.1 tRNAscan-SE tRNA 1457387 1457463 . - . ID=rna51;Parent=gene1437;anticodon=(pos:complement(1457427..1457429));gbkey=tRNA;product=tRNA-Met NZ_CP010441.1 tRNAscan-SE exon 1457387 1457463 . - . ID=id98;Parent=rna51;anticodon=(pos:complement(1457427..1457429));gbkey=tRNA;product=tRNA-Met NZ_CP010441.1 RefSeq gene 1457843 1459507 . - . ID=gene1438;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=SH03_RS07205;old_locus_tag=SH03_07195 NZ_CP010441.1 Protein Homology CDS 1457843 1459507 . - 0 ID=cds1386;Parent=gene1438;Dbxref=Genbank:WP_000337077.1;Name=WP_000337077.1;Note=functions in asparagine biosynthesis%3B converts glutamine%2C aspartate%2C ATP%2C and water to glutamate%2C asparagine%2C pyrophosphate and AMP;gbkey=CDS;gene=asnB;product=asparagine synthetase B [glutamine-hydrolyzing];protein_id=WP_000337077.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1459904 1460656 . - . ID=gene1439;Name=SH03_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07210;old_locus_tag=SH03_07200 NZ_CP010441.1 Protein Homology CDS 1459904 1460656 . - 0 ID=cds1387;Parent=gene1439;Dbxref=Genbank:WP_000153136.1;Name=WP_000153136.1;gbkey=CDS;product=UMP phosphatase;protein_id=WP_000153136.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1460704 1461924 . - . ID=gene1440;Name=SH03_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07215;old_locus_tag=SH03_07205 NZ_CP010441.1 Protein Homology CDS 1460704 1461924 . - 0 ID=cds1388;Parent=gene1440;Dbxref=Genbank:WP_000187594.1;Name=WP_000187594.1;Note=regulates the synthesis of glucosamine and N-acetylglucosamine by acting as a repressor of the nagEBACD operon and both a repressor and activator of the glmSU operon;gbkey=CDS;product=N-acetylglucosamine repressor;protein_id=WP_000187594.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1461933 1463081 . - . ID=gene1441;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=SH03_RS07220;old_locus_tag=SH03_07210 NZ_CP010441.1 Protein Homology CDS 1461933 1463081 . - 0 ID=cds1389;Parent=gene1441;Dbxref=Genbank:WP_000271153.1;Name=WP_000271153.1;Note=catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate;gbkey=CDS;gene=nagA;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_000271153.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1463141 1463941 . - . ID=gene1442;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=SH03_RS07225;old_locus_tag=SH03_07215 NZ_CP010441.1 Protein Homology CDS 1463141 1463941 . - 0 ID=cds1390;Parent=gene1442;Dbxref=Genbank:WP_001237072.1;Name=WP_001237072.1;Note=catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate;gbkey=CDS;gene=nagB;product=glucosamine-6-phosphate deaminase;protein_id=WP_001237072.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1464274 1466220 . + . ID=gene1443;Name=SH03_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07230;old_locus_tag=SH03_07220 NZ_CP010441.1 Protein Homology CDS 1464274 1466220 . + 0 ID=cds1391;Parent=gene1443;Dbxref=Genbank:WP_001023093.1;Name=WP_001023093.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS N-acetylglucosamine EIICBA component;protein_id=WP_001023093.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1466423 1468087 . + . ID=gene1444;Name=SH03_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07235;old_locus_tag=SH03_07225 NZ_CP010441.1 Protein Homology CDS 1466423 1468087 . + 0 ID=cds1392;Parent=gene1444;Dbxref=Genbank:WP_001287154.1;Name=WP_001287154.1;Note=catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;product=glutamine--tRNA ligase;protein_id=WP_001287154.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1468162 1468265 . + . ID=id99;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1468664 1470070 . + . ID=gene1445;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=SH03_RS07240;old_locus_tag=SH03_07230 NZ_CP010441.1 Protein Homology CDS 1468664 1470070 . + 0 ID=cds1393;Parent=gene1445;Dbxref=Genbank:WP_001258819.1;Name=WP_001258819.1;Note=outer membrane porin involved in the transport of chitooligosaccharides;gbkey=CDS;gene=chiP;product=chitoporin;protein_id=WP_001258819.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1470120 1470446 . + . ID=gene1446;Name=SH03_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07245;old_locus_tag=SH03_07235 NZ_CP010441.1 Protein Homology CDS 1470120 1470446 . + 0 ID=cds1394;Parent=gene1446;Dbxref=Genbank:WP_000733579.1;Name=WP_000733579.1;gbkey=CDS;product=chitosugar-induced verified lipoprotein;protein_id=WP_000733579.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1470530 1470976 . - . ID=gene1447;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=SH03_RS07250;old_locus_tag=SH03_07240 NZ_CP010441.1 Protein Homology CDS 1470530 1470976 . - 0 ID=cds1395;Parent=gene1447;Dbxref=Genbank:WP_000131702.1;Name=WP_000131702.1;Note=negatively regulates a number of operons that encode enzymes involved in iron transport%3B activated by manganese%3B forms a homodimer;gbkey=CDS;gene=fur;product=ferric uptake regulation protein;protein_id=WP_000131702.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1470969 1471055 . - . ID=gene1448;Name=SH03_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07255;old_locus_tag=SH03_07245 NZ_CP010441.1 Protein Homology CDS 1470969 1471055 . - 0 ID=cds1396;Parent=gene1448;Dbxref=Genbank:WP_001406816.1;Name=WP_001406816.1;gbkey=CDS;product=Fur leader peptide;protein_id=WP_001406816.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1471021 1471275 . + . ID=gene1449;Name=SH03_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07260;old_locus_tag=SH03_07250 NZ_CP010441.1 Protein Homology CDS 1471021 1471275 . + 0 ID=cds1397;Parent=gene1449;Dbxref=Genbank:WP_001323354.1;Name=WP_001323354.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001323354.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1471265 1471795 . - . ID=gene1450;Name=SH03_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07265;old_locus_tag=SH03_07255 NZ_CP010441.1 Protein Homology CDS 1471265 1471795 . - 0 ID=cds1398;Parent=gene1450;Dbxref=Genbank:WP_001018618.1;Name=WP_001018618.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin-1;protein_id=WP_001018618.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1471935 1472228 . - . ID=gene1451;Name=SH03_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07270;old_locus_tag=SH03_07260 NZ_CP010441.1 Protein Homology CDS 1471935 1472228 . - 0 ID=cds1399;Parent=gene1451;Dbxref=Genbank:WP_001300829.1;Name=WP_001300829.1;gbkey=CDS;product=LexA-regulated protein%2C CopB family;protein_id=WP_001300829.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1472368 1473132 . - . ID=gene1452;Name=SH03_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07275;old_locus_tag=SH03_07265 NZ_CP010441.1 Protein Homology CDS 1472368 1473132 . - 0 ID=cds1400;Parent=gene1452;Dbxref=Genbank:WP_000773288.1;Name=WP_000773288.1;gbkey=CDS;product=esterase;protein_id=WP_000773288.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1473317 1473862 . + . ID=gene1453;Name=SH03_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07280;old_locus_tag=SH03_07270 NZ_CP010441.1 Protein Homology CDS 1473317 1473862 . + 0 ID=cds1401;Parent=gene1453;Dbxref=Genbank:WP_000848387.1;Name=WP_000848387.1;Note=negative modulator of the initiation of chromosome replication;gbkey=CDS;product=negative modulator of initiation of replication;protein_id=WP_000848387.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1473888 1475528 . + . ID=gene1454;Name=SH03_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07285;old_locus_tag=SH03_07275 NZ_CP010441.1 Protein Homology CDS 1473888 1475528 . + 0 ID=cds1402;Parent=gene1454;Dbxref=Genbank:WP_001297249.1;Name=WP_001297249.1;Note=catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate;gbkey=CDS;product=phosphoglucomutase;protein_id=WP_001297249.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1475742 1476236 . + . ID=gene1455;Name=SH03_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07290;old_locus_tag=SH03_07280 NZ_CP010441.1 Protein Homology CDS 1475742 1476236 . + 0 ID=cds1403;Parent=gene1455;Dbxref=Genbank:WP_000856353.1;Name=WP_000856353.1;gbkey=CDS;product=lipoprotein;protein_id=WP_000856353.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1476277 1476927 . - . ID=gene1456;Name=SH03_RS07295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS07295;pseudo=true NZ_CP010441.1 Protein Homology CDS 1476277 1476927 . - 0 ID=cds1404;Parent=gene1456;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(1476718..1476720)%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq gene 1477051 1477248 . - . ID=gene1457;Name=SH03_RS07300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS07300;pseudo=true NZ_CP010441.1 Protein Homology CDS 1477051 1477248 . - 0 ID=cds1405;Parent=gene1457;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(1477186..1477188)%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq gene 1477276 1478595 . - . ID=gene1458;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=SH03_RS07305;old_locus_tag=SH03_07295 NZ_CP010441.1 Protein Homology CDS 1477276 1478595 . - 0 ID=cds1406;Parent=gene1458;Dbxref=Genbank:WP_000075845.1;Name=WP_000075845.1;Note=catalyzes the uptake of putrescine via a proton symport mechanism%2C as well as the efflux of putrescine by a putrescine/ornithine antiport system;gbkey=CDS;gene=potE;product=putrescine-ornithine antiporter;protein_id=WP_000075845.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1478592 1480790 . - . ID=gene1459;Name=SH03_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07310;old_locus_tag=SH03_07300 NZ_CP010441.1 Protein Homology CDS 1478592 1480790 . - 0 ID=cds1407;Parent=gene1459;Dbxref=Genbank:WP_000040195.1;Name=WP_000040195.1;gbkey=CDS;product=ornithine decarboxylase;protein_id=WP_000040195.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1480913 1481170 . + . ID=gene1460;Name=SH03_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07315;old_locus_tag=SH03_07305 NZ_CP010441.1 Protein Homology CDS 1480913 1481170 . + 0 ID=cds1408;Parent=gene1460;Dbxref=Genbank:WP_001171592.1;Name=WP_001171592.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001171592.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1481386 1482063 . - . ID=gene1461;Name=SH03_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07320;old_locus_tag=SH03_07310 NZ_CP010441.1 Protein Homology CDS 1481386 1482063 . - 0 ID=cds1409;Parent=gene1461;Dbxref=Genbank:WP_000186076.1;Name=WP_000186076.1;Note=response regulator in two-component regulatory system with KdpD%3B regulates the kdp operon involved in potassium transport;gbkey=CDS;product=two-component system response regulator;protein_id=WP_000186076.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1482060 1484744 . - . ID=gene1462;Name=SH03_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07325;old_locus_tag=SH03_07315 NZ_CP010441.1 Protein Homology CDS 1482060 1484744 . - 0 ID=cds1410;Parent=gene1462;Dbxref=Genbank:WP_001310640.1;Name=WP_001310640.1;Note=sensory histidine kinase in two-component regulatory system with KdpE%3B signal sensing protein;gbkey=CDS;product=two-component system sensor histidine kinase KdpD;protein_id=WP_001310640.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1484737 1485309 . - . ID=gene1463;Name=SH03_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07330;old_locus_tag=SH03_07320 NZ_CP010441.1 Protein Homology CDS 1484737 1485309 . - 0 ID=cds1411;Parent=gene1463;Dbxref=Genbank:WP_001300431.1;Name=WP_001300431.1;Note=One of the components of the high-affinity ATP-driven potassium transport (or KDP)system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex;gbkey=CDS;product=potassium-transporting ATPase C chain;protein_id=WP_001300431.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1485318 1487366 . - . ID=gene1464;Name=SH03_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07335;old_locus_tag=SH03_07325 NZ_CP010441.1 Protein Homology CDS 1485318 1487366 . - 0 ID=cds1412;Parent=gene1464;Dbxref=Genbank:WP_000087939.1;Name=WP_000087939.1;Note=One of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;product=potassium-transporting ATPase B chain;protein_id=WP_000087939.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1487389 1489062 . - . ID=gene1465;Name=SH03_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07340;old_locus_tag=SH03_07330 NZ_CP010441.1 Protein Homology CDS 1487389 1489062 . - 0 ID=cds1413;Parent=gene1465;Dbxref=Genbank:WP_000741129.1;Name=WP_000741129.1;Note=catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;product=potassium-transporting ATPase A chain;protein_id=WP_000741129.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1489062 1489151 . - . ID=gene1466;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=SH03_RS07345;old_locus_tag=SH03_07335 NZ_CP010441.1 Protein Homology CDS 1489062 1489151 . - 0 ID=cds1414;Parent=gene1466;Dbxref=Genbank:WP_001272653.1;Name=WP_001272653.1;Note=one of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;gene=kdpF;product=protein KdpF;protein_id=WP_001272653.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1489464 1489670 . + . ID=gene1467;Name=SH03_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07350;old_locus_tag=SH03_07340 NZ_CP010441.1 Protein Homology CDS 1489464 1489670 . + 0 ID=cds1415;Parent=gene1467;Dbxref=Genbank:WP_000424924.1;Name=WP_000424924.1;gbkey=CDS;product=DUF2517 domain-containing protein;protein_id=WP_000424924.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1489829 1492134 . + . ID=id100;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1489913 1494106 . + . ID=gene1468;Name=SH03_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07355;old_locus_tag=SH03_07345 NZ_CP010441.1 Protein Homology CDS 1489913 1494106 . + 0 ID=cds1416;Parent=gene1468;Dbxref=Genbank:WP_000015200.1;Name=WP_000015200.1;gbkey=CDS;product=RHS element protein;protein_id=WP_000015200.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1492177 1493626 . + . ID=id101;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1494106 1494432 . + . ID=gene1469;Name=SH03_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07360;old_locus_tag=SH03_07350 NZ_CP010441.1 Protein Homology CDS 1494106 1494432 . + 0 ID=cds1417;Parent=gene1469;Dbxref=Genbank:WP_000873944.1;Name=WP_000873944.1;gbkey=CDS;product=membrane protein;protein_id=WP_000873944.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1494478 1495499 . + . ID=id102;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1494550 1495983 . + . ID=gene1470;Name=SH03_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07365;old_locus_tag=SH03_07355 NZ_CP010441.1 Protein Homology CDS 1494550 1495983 . + 0 ID=cds1418;Parent=gene1470;Dbxref=Genbank:WP_000267514.1;Name=WP_000267514.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000267514.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1495980 1496549 . + . ID=gene1471;Name=SH03_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07370;old_locus_tag=SH03_07360 NZ_CP010441.1 Protein Homology CDS 1495980 1496549 . + 0 ID=cds1419;Parent=gene1471;Dbxref=Genbank:WP_000832338.1;Name=WP_000832338.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000832338.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1496775 1497029 . + . ID=gene1472;Name=SH03_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07375;old_locus_tag=SH03_07365 NZ_CP010441.1 Protein Homology CDS 1496775 1497029 . + 0 ID=cds1420;Parent=gene1472;Dbxref=Genbank:WP_000421001.1;Name=WP_000421001.1;gbkey=CDS;product=transposase;protein_id=WP_000421001.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1497037 1498295 . + . ID=id103;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1497248 1498291 . + . ID=gene1473;Name=SH03_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07380;old_locus_tag=SH03_07370 NZ_CP010441.1 Protein Homology CDS 1497248 1498291 . + 0 ID=cds1421;Parent=gene1473;Dbxref=Genbank:WP_032265581.1;Name=WP_032265581.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032265581.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1498302 1499190 . + . ID=id104;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1498422 1499183 . + . ID=gene1474;Name=SH03_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07385;old_locus_tag=SH03_07375 NZ_CP010441.1 Protein Homology CDS 1498422 1499183 . + 0 ID=cds1422;Parent=gene1474;Dbxref=Genbank:WP_000420862.1;Name=WP_000420862.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000420862.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1499331 1499840 . + . ID=gene1475;Name=SH03_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07390;old_locus_tag=SH03_07380 NZ_CP010441.1 Protein Homology CDS 1499331 1499840 . + 0 ID=cds1423;Parent=gene1475;Dbxref=Genbank:WP_001053305.1;Name=WP_001053305.1;gbkey=CDS;product=DUF1722 domain-containing protein;protein_id=WP_001053305.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1499837 1501255 . + . ID=gene1476;Name=SH03_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07395;old_locus_tag=SH03_07385 NZ_CP010441.1 Protein Homology CDS 1499837 1501255 . + 0 ID=cds1424;Parent=gene1476;Dbxref=Genbank:WP_000207142.1;Name=WP_000207142.1;Note=UV-induced DNA repair%3B converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers%3B light dependent;gbkey=CDS;product=deoxyribodipyrimidine photolyase;protein_id=WP_000207142.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1501405 1502886 . - . ID=gene1477;Name=SH03_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07400;old_locus_tag=SH03_07390 NZ_CP010441.1 Protein Homology CDS 1501405 1502886 . - 0 ID=cds1425;Parent=gene1477;Dbxref=Genbank:WP_001032689.1;Name=WP_001032689.1;gbkey=CDS;product=dipeptide permease D;protein_id=WP_001032689.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1503157 1503900 . + . ID=gene1478;Name=SH03_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07405;old_locus_tag=SH03_07395 NZ_CP010441.1 Protein Homology CDS 1503157 1503900 . + 0 ID=cds1426;Parent=gene1478;Dbxref=Genbank:WP_000798871.1;Name=WP_000798871.1;gbkey=CDS;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_000798871.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1503923 1504579 . + . ID=gene1479;Name=SH03_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07410;old_locus_tag=SH03_07400 NZ_CP010441.1 Protein Homology CDS 1503923 1504579 . + 0 ID=cds1427;Parent=gene1479;Dbxref=Genbank:WP_001188343.1;Name=WP_001188343.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001188343.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1504573 1505505 . + . ID=gene1480;Name=SH03_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07415;old_locus_tag=SH03_07405 NZ_CP010441.1 Protein Homology CDS 1504573 1505505 . + 0 ID=cds1428;Parent=gene1480;Dbxref=Genbank:WP_000912724.1;Name=WP_000912724.1;gbkey=CDS;product=allophanate hydrolase;protein_id=WP_000912724.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1505495 1506229 . + . ID=gene1481;Name=SH03_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07420;old_locus_tag=SH03_07410 NZ_CP010441.1 Protein Homology CDS 1505495 1506229 . + 0 ID=cds1429;Parent=gene1481;Dbxref=Genbank:WP_000687112.1;Name=WP_000687112.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000687112.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1506265 1507056 . + . ID=gene1482;Name=SH03_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07425;old_locus_tag=SH03_07415 NZ_CP010441.1 Protein Homology CDS 1506265 1507056 . + 0 ID=cds1430;Parent=gene1482;Dbxref=Genbank:WP_001113989.1;Name=WP_001113989.1;Note=5-formyluracil/5-hydroxymethyluracil DNA glycosylase%3B involved in base excision repair of DNA damaged by oxidation or by mutagenic agents%3B acts as DNA glycosylase that recognizes and removes damaged bases with a preference for oxidized pyrimidines%3B has apurinic/apyrimidinic lyase activity;gbkey=CDS;product=endonuclease VII;protein_id=WP_001113989.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1507053 1508099 . - . ID=gene1483;Name=SH03_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07430;old_locus_tag=SH03_07420 NZ_CP010441.1 Protein Homology CDS 1507053 1508099 . - 0 ID=cds1431;Parent=gene1483;Dbxref=Genbank:WP_001336221.1;Name=WP_001336221.1;gbkey=CDS;product=protein AbrB;protein_id=WP_001336221.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1508251 1509312 . - . ID=gene1484;Name=SH03_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07435;old_locus_tag=SH03_07425 NZ_CP010441.1 Protein Homology CDS 1508251 1509312 . - 0 ID=cds1432;Parent=gene1484;Dbxref=Genbank:WP_001272410.1;Name=WP_001272410.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_001272410.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1509309 1510037 . - . ID=gene1485;Name=SH03_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07440;old_locus_tag=SH03_07430 NZ_CP010441.1 Protein Homology CDS 1509309 1510037 . - 0 ID=cds1433;Parent=gene1485;Dbxref=Genbank:WP_000142799.1;Name=WP_000142799.1;gbkey=CDS;product=periplasmic pilin chaperone;protein_id=WP_000142799.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1510052 1512499 . - . ID=gene1486;Name=SH03_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07445;old_locus_tag=SH03_07435 NZ_CP010441.1 Protein Homology CDS 1510052 1512499 . - 0 ID=cds1434;Parent=gene1486;Dbxref=Genbank:WP_001350492.1;Name=WP_001350492.1;gbkey=CDS;product=outer membrane protein;protein_id=WP_001350492.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1512559 1513125 . - . ID=gene1487;Name=SH03_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07450;old_locus_tag=SH03_07440 NZ_CP010441.1 Protein Homology CDS 1512559 1513125 . - 0 ID=cds1435;Parent=gene1487;Dbxref=Genbank:WP_000472412.1;Name=WP_000472412.1;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=WP_000472412.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1513515 1514798 . - . ID=gene1488;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=SH03_RS07455;old_locus_tag=SH03_07445 NZ_CP010441.1 Protein Homology CDS 1513515 1514798 . - 0 ID=cds1436;Parent=gene1488;Dbxref=Genbank:WP_000785834.1;Name=WP_000785834.1;Note=type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH;gbkey=CDS;gene=gltA;product=citrate synthase;protein_id=WP_000785834.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1514786 1514971 . + . ID=gene1489;Name=SH03_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07460;old_locus_tag=SH03_07450 NZ_CP010441.1 Protein Homology CDS 1514786 1514971 . + 0 ID=cds1437;Parent=gene1489;Dbxref=Genbank:WP_001336219.1;Name=WP_001336219.1;gbkey=CDS;product=citrate synthase;protein_id=WP_001336219.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1515492 1515896 . + . ID=gene1490;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;locus_tag=SH03_RS07465;old_locus_tag=SH03_07455 NZ_CP010441.1 Protein Homology CDS 1515492 1515896 . + 0 ID=cds1438;Parent=gene1490;Dbxref=Genbank:WP_000263347.1;Name=WP_000263347.1;gbkey=CDS;gene=sdhC;product=succinate dehydrogenase cytochrome b556 large membrane subunit;protein_id=WP_000263347.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1515890 1516237 . + . ID=gene1491;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=SH03_RS07470;old_locus_tag=SH03_07460 NZ_CP010441.1 Protein Homology CDS 1515890 1516237 . + 0 ID=cds1439;Parent=gene1491;Dbxref=Genbank:WP_000254365.1;Name=WP_000254365.1;gbkey=CDS;gene=sdhD;product=succinate dehydrogenase hydrophobic membrane anchor subunit;protein_id=WP_000254365.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1516237 1518003 . + . ID=gene1492;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=SH03_RS07475;old_locus_tag=SH03_07465 NZ_CP010441.1 Protein Homology CDS 1516237 1518003 . + 0 ID=cds1440;Parent=gene1492;Dbxref=Genbank:WP_000775540.1;Name=WP_000775540.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol;gbkey=CDS;gene=sdhA;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_000775540.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1518019 1518735 . + . ID=gene1493;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=SH03_RS07480;old_locus_tag=SH03_07470 NZ_CP010441.1 Protein Homology CDS 1518019 1518735 . + 0 ID=cds1441;Parent=gene1493;Dbxref=Genbank:WP_001235254.1;Name=WP_001235254.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase;gbkey=CDS;gene=sdhB;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_001235254.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1518794 1519054 . + . ID=gene1494;Name=SH03_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07485;old_locus_tag=SH03_07475 NZ_CP010441.1 Protein Homology CDS 1518794 1519054 . + 0 ID=cds1442;Parent=gene1494;Dbxref=Genbank:WP_001303843.1;Name=WP_001303843.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001303843.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1519036 1521837 . + . ID=gene1495;Name=SH03_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07490;old_locus_tag=SH03_07480 NZ_CP010441.1 Protein Homology CDS 1519036 1521837 . + 0 ID=cds1443;Parent=gene1495;Dbxref=Genbank:WP_001181473.1;Name=WP_001181473.1;gbkey=CDS;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001181473.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1521852 1523069 . + . ID=gene1496;Name=SH03_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07495;old_locus_tag=SH03_07485 NZ_CP010441.1 Protein Homology CDS 1521852 1523069 . + 0 ID=cds1444;Parent=gene1496;Dbxref=Genbank:WP_000099823.1;Name=WP_000099823.1;Note=component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA;gbkey=CDS;product=dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex;protein_id=WP_000099823.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1523344 1524510 . + . ID=gene1497;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=SH03_RS07500;old_locus_tag=SH03_07490 NZ_CP010441.1 Protein Homology CDS 1523344 1524510 . + 0 ID=cds1445;Parent=gene1497;Dbxref=Genbank:WP_001048602.1;Name=WP_001048602.1;Note=catalyzes the interconversion of succinyl-CoA and succinate;gbkey=CDS;gene=sucC;product=succinyl-CoA ligase subunit beta;protein_id=WP_001048602.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1524510 1525379 . + . ID=gene1498;Name=SH03_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07505;old_locus_tag=SH03_07495 NZ_CP010441.1 Protein Homology CDS 1524510 1525379 . + 0 ID=cds1446;Parent=gene1498;Dbxref=Genbank:WP_000025458.1;Name=WP_000025458.1;Note=Catalyzes the only substrate-level phosphorylation in the TCA cycle;gbkey=CDS;product=succinyl-CoA ligase subunit alpha;protein_id=WP_000025458.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1525483 1526205 . - . ID=gene1499;Name=SH03_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07510;old_locus_tag=SH03_07500 NZ_CP010441.1 Protein Homology CDS 1525483 1526205 . - 0 ID=cds1447;Parent=gene1499;Dbxref=Genbank:WP_000509902.1;Name=WP_000509902.1;Note=regulates the succiny-lCoA synthetase operon;gbkey=CDS;product=mannosyl-D-glycerate transport/metabolism system repressor MngR;protein_id=WP_000509902.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1526374 1528290 . + . ID=gene1500;Name=SH03_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07515;old_locus_tag=SH03_07505 NZ_CP010441.1 Protein Homology CDS 1526374 1528290 . + 0 ID=cds1448;Parent=gene1500;Dbxref=Genbank:WP_001054864.1;Name=WP_001054864.1;Note=involved in the phosphorylation and transport of sugars across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=PTS 2-O-a-mannosyl-D-glycerate transporter subunit IIABC;protein_id=WP_001054864.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1528308 1530941 . + . ID=gene1501;Name=SH03_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07520;old_locus_tag=SH03_07510 NZ_CP010441.1 Protein Homology CDS 1528308 1530941 . + 0 ID=cds1449;Parent=gene1501;Dbxref=Genbank:WP_000648976.1;Name=WP_000648976.1;gbkey=CDS;product=mannosylglycerate hydrolase;protein_id=WP_000648976.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1530966 1531193 . + . ID=gene1502;Name=SH03_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07525;old_locus_tag=SH03_07515 NZ_CP010441.1 Protein Homology CDS 1530966 1531193 . + 0 ID=cds1450;Parent=gene1502;Dbxref=Genbank:WP_001324497.1;Name=WP_001324497.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001324497.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1531788 1533356 . + . ID=gene1503;Name=SH03_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07530;old_locus_tag=SH03_07520 NZ_CP010441.1 Protein Homology CDS 1531788 1533356 . + 0 ID=cds1451;Parent=gene1503;Dbxref=Genbank:WP_000884361.1;Name=WP_000884361.1;Note=part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone;gbkey=CDS;product=cytochrome bd-I ubiquinol oxidase subunit 1;protein_id=WP_000884361.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1533372 1534511 . + . ID=gene1504;Name=SH03_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07535;old_locus_tag=SH03_07525 NZ_CP010441.1 Protein Homology CDS 1533372 1534511 . + 0 ID=cds1452;Parent=gene1504;Dbxref=Genbank:WP_000568275.1;Name=WP_000568275.1;gbkey=CDS;product=cytochrome bd-I ubiquinol oxidase subunit 2;protein_id=WP_000568275.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1534526 1534639 . + . ID=gene1505;Name=SH03_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07540;old_locus_tag=SH03_07530 NZ_CP010441.1 Protein Homology CDS 1534526 1534639 . + 0 ID=cds1453;Parent=gene1505;Dbxref=Genbank:WP_000270282.1;Name=WP_000270282.1;gbkey=CDS;product=cytochrome bd-I ubiquinol oxidase subunit X;protein_id=WP_000270282.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1534639 1534932 . + . ID=gene1506;Name=SH03_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07545;old_locus_tag=SH03_07535 NZ_CP010441.1 Protein Homology CDS 1534639 1534932 . + 0 ID=cds1454;Parent=gene1506;Dbxref=Genbank:WP_000034602.1;Name=WP_000034602.1;gbkey=CDS;product=cyd operon protein YbgE;protein_id=WP_000034602.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1535082 1535486 . + . ID=gene1507;Name=SH03_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07550;old_locus_tag=SH03_07540 NZ_CP010441.1 Protein Homology CDS 1535082 1535486 . + 0 ID=cds1455;Parent=gene1507;Dbxref=Genbank:WP_001098384.1;Name=WP_001098384.1;Note=catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters%3B physiological role remains unknown%3B involved in phospholipid metabolism%3B part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components;gbkey=CDS;product=acyl-CoA thioester hydrolase YbgC;protein_id=WP_001098384.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1535492 1536175 . + . ID=gene1508;Name=SH03_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07555;old_locus_tag=SH03_07545 NZ_CP010441.1 Protein Homology CDS 1535492 1536175 . + 0 ID=cds1456;Parent=gene1508;Dbxref=Genbank:WP_001307062.1;Name=WP_001307062.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;product=colicin transporter;protein_id=WP_001307062.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1536179 1536607 . + . ID=gene1509;Name=SH03_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07560;old_locus_tag=SH03_07550 NZ_CP010441.1 Protein Homology CDS 1536179 1536607 . + 0 ID=cds1457;Parent=gene1509;Dbxref=Genbank:WP_000090097.1;Name=WP_000090097.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;product=protein TolR;protein_id=WP_000090097.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1536672 1537937 . + . ID=gene1510;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=SH03_RS07565;old_locus_tag=SH03_07555 NZ_CP010441.1 Protein Homology CDS 1536672 1537937 . + 0 ID=cds1458;Parent=gene1510;Dbxref=Genbank:WP_000030637.1;Name=WP_000030637.1;Note=inner membrane component of 7 member Tol-Pal envelope-spanning complex%3B involved in maintaining cell envelope integrity%3B utilized by colicins and filamentous phages for import%3B interacts with TolB%2C Pal%2C and through TolB to various outer membrane porins;gbkey=CDS;gene=tolA;product=cell envelope integrity/translocation protein TolA;protein_id=WP_000030637.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1538070 1539362 . + . ID=gene1511;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=SH03_RS07570;old_locus_tag=SH03_07560 NZ_CP010441.1 Protein Homology CDS 1538070 1539362 . + 0 ID=cds1459;Parent=gene1511;Dbxref=Genbank:WP_001295307.1;Name=WP_001295307.1;Note=forms dimers%3B may be involved in cell envelope integrity%3B interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA;gbkey=CDS;gene=tolB;product=protein TolB;protein_id=WP_001295307.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1539397 1539918 . + . ID=gene1512;Name=SH03_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07575;old_locus_tag=SH03_07565 NZ_CP010441.1 Protein Homology CDS 1539397 1539918 . + 0 ID=cds1460;Parent=gene1512;Dbxref=Genbank:WP_001295306.1;Name=WP_001295306.1;gbkey=CDS;product=peptidoglycan-associated lipoprotein;protein_id=WP_001295306.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1539928 1540719 . + . ID=gene1513;Name=SH03_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07580;old_locus_tag=SH03_07570 NZ_CP010441.1 Protein Homology CDS 1539928 1540719 . + 0 ID=cds1461;Parent=gene1513;Dbxref=Genbank:WP_000097571.1;Name=WP_000097571.1;Note=periplasmic protein that interacts with TolA%3B the tol-pal system is probably involved in maintaining cell envelope integrity;gbkey=CDS;product=periplasmic TolA-binding protein;protein_id=WP_000097571.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1540884 1540959 . + . ID=gene1514;Name=SH03_RS07585;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS07585;old_locus_tag=SH03_07575 NZ_CP010441.1 tRNAscan-SE tRNA 1540884 1540959 . + . ID=rna52;Parent=gene1514;anticodon=(pos:1540917..1540919);gbkey=tRNA;product=tRNA-Lys NZ_CP010441.1 tRNAscan-SE exon 1540884 1540959 . + . ID=id105;Parent=rna52;anticodon=(pos:1540917..1540919);gbkey=tRNA;product=tRNA-Lys NZ_CP010441.1 RefSeq repeat_region 1541073 1541346 . + . ID=id106;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1541095 1541170 . + . ID=gene1515;Name=SH03_RS07590;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS07590;old_locus_tag=SH03_07580 NZ_CP010441.1 tRNAscan-SE tRNA 1541095 1541170 . + . ID=rna53;Parent=gene1515;anticodon=(pos:1541128..1541130);gbkey=tRNA;product=tRNA-Val NZ_CP010441.1 tRNAscan-SE exon 1541095 1541170 . + . ID=id107;Parent=rna53;anticodon=(pos:1541128..1541130);gbkey=tRNA;product=tRNA-Val NZ_CP010441.1 RefSeq gene 1541173 1541248 . + . ID=gene1516;Name=SH03_RS07595;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS07595;old_locus_tag=SH03_07585 NZ_CP010441.1 tRNAscan-SE tRNA 1541173 1541248 . + . ID=rna54;Parent=gene1516;anticodon=(pos:1541206..1541208);gbkey=tRNA;product=tRNA-Lys NZ_CP010441.1 tRNAscan-SE exon 1541173 1541248 . + . ID=id108;Parent=rna54;anticodon=(pos:1541206..1541208);gbkey=tRNA;product=tRNA-Lys NZ_CP010441.1 RefSeq repeat_region 1541376 1541650 . + . ID=id109;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1541398 1541473 . + . ID=gene1517;Name=SH03_RS07600;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS07600;old_locus_tag=SH03_07590 NZ_CP010441.1 tRNAscan-SE tRNA 1541398 1541473 . + . ID=rna55;Parent=gene1517;anticodon=(pos:1541431..1541433);gbkey=tRNA;product=tRNA-Val NZ_CP010441.1 tRNAscan-SE exon 1541398 1541473 . + . ID=id110;Parent=rna55;anticodon=(pos:1541431..1541433);gbkey=tRNA;product=tRNA-Val NZ_CP010441.1 RefSeq gene 1541477 1541552 . + . ID=gene1518;Name=SH03_RS07605;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS07605;old_locus_tag=SH03_07595 NZ_CP010441.1 tRNAscan-SE tRNA 1541477 1541552 . + . ID=rna56;Parent=gene1518;anticodon=(pos:1541510..1541512);gbkey=tRNA;product=tRNA-Lys NZ_CP010441.1 tRNAscan-SE exon 1541477 1541552 . + . ID=id111;Parent=rna56;anticodon=(pos:1541510..1541512);gbkey=tRNA;product=tRNA-Lys NZ_CP010441.1 RefSeq gene 1541699 1541774 . + . ID=gene1519;Name=SH03_RS07610;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS07610;old_locus_tag=SH03_07600 NZ_CP010441.1 tRNAscan-SE tRNA 1541699 1541774 . + . ID=rna57;Parent=gene1519;anticodon=(pos:1541732..1541734);gbkey=tRNA;product=tRNA-Lys NZ_CP010441.1 tRNAscan-SE exon 1541699 1541774 . + . ID=id112;Parent=rna57;anticodon=(pos:1541732..1541734);gbkey=tRNA;product=tRNA-Lys NZ_CP010441.1 RefSeq repeat_region 1541907 1542174 . + . ID=id113;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1541907 1541982 . + . ID=gene1520;Name=SH03_RS07615;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS07615;old_locus_tag=SH03_07605 NZ_CP010441.1 tRNAscan-SE tRNA 1541907 1541982 . + . ID=rna58;Parent=gene1520;anticodon=(pos:1541940..1541942);gbkey=tRNA;product=tRNA-Lys NZ_CP010441.1 tRNAscan-SE exon 1541907 1541982 . + . ID=id114;Parent=rna58;anticodon=(pos:1541940..1541942);gbkey=tRNA;product=tRNA-Lys NZ_CP010441.1 RefSeq gene 1542415 1543458 . + . ID=gene1521;Name=SH03_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07620;old_locus_tag=SH03_07610 NZ_CP010441.1 Protein Homology CDS 1542415 1543458 . + 0 ID=cds1462;Parent=gene1521;Dbxref=Genbank:WP_000115290.1;Name=WP_000115290.1;Note=3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate;gbkey=CDS;product=quinolinate synthase A;protein_id=WP_000115290.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1543496 1544215 . + . ID=gene1522;Name=SH03_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07625;old_locus_tag=SH03_07615 NZ_CP010441.1 Protein Homology CDS 1543496 1544215 . + 0 ID=cds1463;Parent=gene1522;Dbxref=Genbank:WP_000345410.1;Name=WP_000345410.1;Note=involved in nicotinamide riboside transport;gbkey=CDS;product=nicotinamide riboside transporter PnuC;protein_id=WP_000345410.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1544212 1545153 . - . ID=gene1523;Name=SH03_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07630;old_locus_tag=SH03_07620 NZ_CP010441.1 Protein Homology CDS 1544212 1545153 . - 0 ID=cds1464;Parent=gene1523;Dbxref=Genbank:WP_000951292.1;Name=WP_000951292.1;Note=involved in zinc efflux across the cytoplasmic membrane;gbkey=CDS;product=zinc transporter ZitB;protein_id=WP_000951292.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1545267 1545647 . - . ID=gene1524;Name=SH03_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07635;old_locus_tag=SH03_07625 NZ_CP010441.1 Protein Homology CDS 1545267 1545647 . - 0 ID=cds1465;Parent=gene1524;Dbxref=Genbank:WP_000784351.1;Name=WP_000784351.1;gbkey=CDS;product=periplasmic protein;protein_id=WP_000784351.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1545742 1545855 . - . ID=gene1525;Name=SH03_RS07640;end_range=1545855,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS07640;partial=true;pseudo=true NZ_CP010441.1 Protein Homology CDS 1545742 1545855 . - 0 ID=cds1466;Parent=gene1525;end_range=1545855,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=glutamate decarboxylase;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 1545963 1547015 . + . ID=gene1526;Name=SH03_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07645;old_locus_tag=SH03_07635 NZ_CP010441.1 Protein Homology CDS 1545963 1547015 . + 0 ID=cds1467;Parent=gene1526;Dbxref=Genbank:WP_001109196.1;Name=WP_001109196.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase Phe-sensitive;protein_id=WP_001109196.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1547173 1547925 . - . ID=gene1527;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=SH03_RS07650;old_locus_tag=SH03_07640 NZ_CP010441.1 Protein Homology CDS 1547173 1547925 . - 0 ID=cds1468;Parent=gene1527;Dbxref=Genbank:WP_001295305.1;Name=WP_001295305.1;Note=2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate;gbkey=CDS;gene=gpmA;product=2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_001295305.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1548127 1549167 . - . ID=gene1528;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=SH03_RS07655;old_locus_tag=SH03_07645 NZ_CP010441.1 Protein Homology CDS 1548127 1549167 . - 0 ID=cds1469;Parent=gene1528;Dbxref=Genbank:WP_000931389.1;Name=WP_000931389.1;Note=mutarotase%3B catalyzes the conversion of beta-galactose to the alpha-anomer%3B links the metabolism of lactose and galactose;gbkey=CDS;gene=galM;product=aldose 1-epimerase;protein_id=WP_000931389.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1549161 1550309 . - . ID=gene1529;Name=SH03_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07660;old_locus_tag=SH03_07650 NZ_CP010441.1 Protein Homology CDS 1549161 1550309 . - 0 ID=cds1470;Parent=gene1529;Dbxref=Genbank:WP_000053415.1;Name=WP_000053415.1;Note=catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism;gbkey=CDS;product=galactokinase;protein_id=WP_000053415.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1550313 1551359 . - . ID=gene1530;Name=SH03_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07665;old_locus_tag=SH03_07655 NZ_CP010441.1 Protein Homology CDS 1550313 1551359 . - 0 ID=cds1471;Parent=gene1530;Dbxref=Genbank:WP_000191497.1;Name=WP_000191497.1;Note=catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P;gbkey=CDS;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_000191497.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1551369 1552385 . - . ID=gene1531;Name=SH03_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07670;old_locus_tag=SH03_07660 NZ_CP010441.1 Protein Homology CDS 1551369 1552385 . - 0 ID=cds1472;Parent=gene1531;Dbxref=Genbank:WP_001265438.1;Name=WP_001265438.1;gbkey=CDS;product=UDP-glucose 4-epimerase;protein_id=WP_001265438.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1552646 1554118 . - . ID=gene1532;Name=SH03_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07675;old_locus_tag=SH03_07665 NZ_CP010441.1 Protein Homology CDS 1552646 1554118 . - 0 ID=cds1473;Parent=gene1532;Dbxref=Genbank:WP_000096869.1;Name=WP_000096869.1;Note=contains 2 ATP-binding cassettes%3B involved in the transport of molybdenum;gbkey=CDS;product=molybdate ABC transporter ATPase;protein_id=WP_000096869.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1554186 1554974 . - . ID=gene1533;Name=SH03_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07680;old_locus_tag=SH03_07675 NZ_CP010441.1 Protein Homology CDS 1554186 1554974 . - 0 ID=cds1474;Parent=gene1533;Dbxref=Genbank:WP_001147439.1;Name=WP_001147439.1;Note=represses the modABCD operon and activates the moaABCD and napFDAGHBC operons;gbkey=CDS;product=transcriptional regulator ModE;protein_id=WP_001147439.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1555103 1555252 . + . ID=gene1534;Name=SH03_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07685;old_locus_tag=SH03_07680 NZ_CP010441.1 Protein Homology CDS 1555103 1555252 . + 0 ID=cds1475;Parent=gene1534;Dbxref=Genbank:WP_000891515.1;Name=WP_000891515.1;gbkey=CDS;product=multidrug efflux pump accessory protein AcrZ;protein_id=WP_000891515.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1555419 1556192 . + . ID=gene1535;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=SH03_RS07690;old_locus_tag=SH03_07685 NZ_CP010441.1 Protein Homology CDS 1555419 1556192 . + 0 ID=cds1476;Parent=gene1535;Dbxref=Genbank:WP_000101984.1;Name=WP_000101984.1;Note=with ModCB is involved in the high-affinity transport of molybdate;gbkey=CDS;gene=modA;product=molybdate-binding periplasmic protein;protein_id=WP_000101984.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1556192 1556881 . + . ID=gene1536;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;gene_synonym=chlJ;locus_tag=SH03_RS07695;old_locus_tag=SH03_07690 NZ_CP010441.1 Protein Homology CDS 1556192 1556881 . + 0 ID=cds1477;Parent=gene1536;Dbxref=Genbank:WP_000604034.1;Name=WP_000604034.1;Note=part of ModCBA molybdate transporter%3B member of ABC superfamily%3B inner membrane component%3B regulated by repressor protein ModE;gbkey=CDS;gene=modB;product=molybdenum ABC transporter permease;protein_id=WP_000604034.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1556884 1557942 . + . ID=gene1537;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=SH03_RS07700;old_locus_tag=SH03_07695 NZ_CP010441.1 Protein Homology CDS 1556884 1557942 . + 0 ID=cds1478;Parent=gene1537;Dbxref=Genbank:WP_000891692.1;Name=WP_000891692.1;Note=Part of the ABC transporter complex modABC involved in molybdenum import;gbkey=CDS;gene=modC;product=molybdenum import ATP-binding protein ModC;protein_id=WP_000891692.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1557943 1558761 . - . ID=gene1538;Name=SH03_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07705;old_locus_tag=SH03_07700 NZ_CP010441.1 Protein Homology CDS 1557943 1558761 . - 0 ID=cds1479;Parent=gene1538;Dbxref=Genbank:WP_001300666.1;Name=WP_001300666.1;gbkey=CDS;product=pyridoxal phosphate phosphatase YbhA;protein_id=WP_001300666.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1558916 1559911 . + . ID=gene1539;Name=SH03_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07710;old_locus_tag=SH03_07705 NZ_CP010441.1 Protein Homology CDS 1558916 1559911 . + 0 ID=cds1480;Parent=gene1539;Dbxref=Genbank:WP_000815435.1;Name=WP_000815435.1;Note=catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate;gbkey=CDS;product=6-phosphogluconolactonase;protein_id=WP_000815435.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1559952 1560905 . - . ID=gene1540;Name=SH03_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07715;old_locus_tag=SH03_07710 NZ_CP010441.1 Protein Homology CDS 1559952 1560905 . - 0 ID=cds1481;Parent=gene1540;Dbxref=Genbank:WP_001350493.1;Name=WP_001350493.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001350493.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1561089 1562141 . + . ID=gene1541;Name=SH03_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07720;old_locus_tag=SH03_07715 NZ_CP010441.1 Protein Homology CDS 1561089 1562141 . + 0 ID=cds1482;Parent=gene1541;Dbxref=Genbank:WP_000723652.1;Name=WP_000723652.1;gbkey=CDS;product=PrpF family isomerase;protein_id=WP_000723652.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1562217 1563650 . + . ID=gene1542;Name=SH03_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07725;old_locus_tag=SH03_07720 NZ_CP010441.1 Protein Homology CDS 1562217 1563650 . + 0 ID=cds1483;Parent=gene1542;Dbxref=Genbank:WP_001036475.1;Name=WP_001036475.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001036475.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1563656 1563779 . + . ID=id115;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1563833 1566094 . + . ID=gene1543;Name=SH03_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07730;old_locus_tag=SH03_07725 NZ_CP010441.1 Protein Homology CDS 1563833 1566094 . + 0 ID=cds1484;Parent=gene1543;Dbxref=Genbank:WP_000593938.1;Name=WP_000593938.1;gbkey=CDS;product=aconitase;protein_id=WP_000593938.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1566328 1567611 . - . ID=gene1544;Name=SH03_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07735;old_locus_tag=SH03_07730 NZ_CP010441.1 Protein Homology CDS 1566328 1567611 . - 0 ID=cds1485;Parent=gene1544;Dbxref=Genbank:WP_001091569.1;Name=WP_001091569.1;gbkey=CDS;product=acyl-CoA thioesterase;protein_id=WP_001091569.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1567763 1568239 . - . ID=gene1545;Name=SH03_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07740;old_locus_tag=SH03_07735 NZ_CP010441.1 Protein Homology CDS 1567763 1568239 . - 0 ID=cds1486;Parent=gene1545;Dbxref=Genbank:WP_000767389.1;Name=WP_000767389.1;Note=YbhB%3B similar to rat and human kinase inhibitory proteins;gbkey=CDS;product=kinase inhibitor homolog%2C UPF0098 family;protein_id=WP_000767389.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1568298 1569530 . - . ID=gene1546;Name=SH03_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07745;old_locus_tag=SH03_07740 NZ_CP010441.1 Protein Homology CDS 1568298 1569530 . - 0 ID=cds1487;Parent=gene1546;Dbxref=Genbank:WP_000203682.1;Name=WP_000203682.1;Note=catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7%2C8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate;gbkey=CDS;product=adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA;protein_id=WP_000203682.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1569674 1570714 . + . ID=gene1547;Name=SH03_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07750;old_locus_tag=SH03_07745 NZ_CP010441.1 Protein Homology CDS 1569674 1570714 . + 0 ID=cds1488;Parent=gene1547;Dbxref=Genbank:WP_000951213.1;Name=WP_000951213.1;Note=catalyzes the formation of biotin from dethiobiotin;gbkey=CDS;product=biotin synthase;protein_id=WP_000951213.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1570711 1571865 . + . ID=gene1548;Name=SH03_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07755;old_locus_tag=SH03_07750 NZ_CP010441.1 Protein Homology CDS 1570711 1571865 . + 0 ID=cds1489;Parent=gene1548;Dbxref=Genbank:WP_000118826.1;Name=WP_000118826.1;Note=catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine;gbkey=CDS;product=8-amino-7-oxononanoate synthase;protein_id=WP_000118826.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1571852 1572607 . + . ID=gene1549;Name=SH03_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07760;old_locus_tag=SH03_07755 NZ_CP010441.1 Protein Homology CDS 1571852 1572607 . + 0 ID=cds1490;Parent=gene1549;Dbxref=Genbank:WP_000246761.1;Name=WP_000246761.1;Note=methyltransferase%3B acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA%2C a biotin precursor%3B member of the bio operon (bioABFCD)%3B in Escherichia coli%2C bioC-null mutants require biotin for growth;gbkey=CDS;product=malonyl-[acyl-carrier protein] O-methyltransferase BioC;protein_id=WP_000246761.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1572600 1573277 . + . ID=gene1550;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=SH03_RS07765;old_locus_tag=SH03_07760 NZ_CP010441.1 Protein Homology CDS 1572600 1573277 . + 0 ID=cds1491;Parent=gene1550;Dbxref=Genbank:WP_000044843.1;Name=WP_000044843.1;Note=DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium;gbkey=CDS;gene=bioD;product=ATP-dependent dethiobiotin synthetase BioD 1;protein_id=WP_000044843.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1573856 1575877 . + . ID=gene1551;Name=SH03_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07770;old_locus_tag=SH03_07765 NZ_CP010441.1 Protein Homology CDS 1573856 1575877 . + 0 ID=cds1492;Parent=gene1551;Dbxref=Genbank:WP_000042533.1;Name=WP_000042533.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;gbkey=CDS;product=UvrABC system protein B;protein_id=WP_000042533.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1576069 1576977 . - . ID=gene1552;Name=SH03_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07775;old_locus_tag=SH03_07770 NZ_CP010441.1 Protein Homology CDS 1576069 1576977 . - 0 ID=cds1493;Parent=gene1552;Dbxref=Genbank:WP_001295302.1;Name=WP_001295302.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001295302.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1577220 1577375 . - . ID=gene1553;Name=SH03_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07780;old_locus_tag=SH03_07775 NZ_CP010441.1 Protein Homology CDS 1577220 1577375 . - 0 ID=cds1494;Parent=gene1553;Dbxref=Genbank:WP_001321721.1;Name=WP_001321721.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001321721.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1577374 1578363 . + . ID=gene1554;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=SH03_RS07785;old_locus_tag=SH03_07780 NZ_CP010441.1 Protein Homology CDS 1577374 1578363 . + 0 ID=cds1495;Parent=gene1554;Dbxref=Genbank:WP_001350494.1;Name=WP_001350494.1;Note=together with moaC%2C is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z;gbkey=CDS;gene=moaA;product=cyclic pyranopterin monophosphate synthase;protein_id=WP_001350494.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1578385 1578897 . + . ID=gene1555;Name=SH03_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07790;old_locus_tag=SH03_07785 NZ_CP010441.1 Protein Homology CDS 1578385 1578897 . + 0 ID=cds1496;Parent=gene1555;Dbxref=Genbank:WP_000084639.1;Name=WP_000084639.1;gbkey=CDS;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084639.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1578900 1579385 . + . ID=gene1556;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=SH03_RS07795;old_locus_tag=SH03_07790 NZ_CP010441.1 Protein Homology CDS 1578900 1579385 . + 0 ID=cds1497;Parent=gene1556;Dbxref=Genbank:WP_000080885.1;Name=WP_000080885.1;Note=MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis;gbkey=CDS;gene=moaC;product=cyclic pyranopterin monophosphate synthase accessory protein;protein_id=WP_000080885.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1579378 1579623 . + . ID=gene1557;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=SH03_RS07800;old_locus_tag=SH03_07795 NZ_CP010441.1 Protein Homology CDS 1579378 1579623 . + 0 ID=cds1498;Parent=gene1557;Dbxref=Genbank:WP_000598619.1;Name=WP_000598619.1;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;gbkey=CDS;gene=moaD;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_000598619.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1579625 1580077 . + . ID=gene1558;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=SH03_RS07805;old_locus_tag=SH03_07800 NZ_CP010441.1 Protein Homology CDS 1579625 1580077 . + 0 ID=cds1499;Parent=gene1558;Dbxref=Genbank:WP_000852296.1;Name=WP_000852296.1;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;gbkey=CDS;gene=moaE;product=molybdopterin synthase catalytic subunit;protein_id=WP_000852296.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1580214 1580918 . + . ID=gene1559;Name=SH03_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07810;old_locus_tag=SH03_07805 NZ_CP010441.1 Protein Homology CDS 1580214 1580918 . + 0 ID=cds1500;Parent=gene1559;Dbxref=Genbank:WP_000373624.1;Name=WP_000373624.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000373624.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1581123 1581836 . + . ID=gene1560;Name=SH03_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07815;old_locus_tag=SH03_07810 NZ_CP010441.1 Protein Homology CDS 1581123 1581836 . + 0 ID=cds1501;Parent=gene1560;Dbxref=Genbank:WP_000446911.1;Name=WP_000446911.1;gbkey=CDS;product=Bax protein;protein_id=WP_000446911.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1581872 1582828 . - . ID=gene1561;Name=SH03_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07820;old_locus_tag=SH03_07815 NZ_CP010441.1 Protein Homology CDS 1581872 1582828 . - 0 ID=cds1502;Parent=gene1561;Dbxref=Genbank:WP_000045450.1;Name=WP_000045450.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000045450.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1582828 1584069 . - . ID=gene1562;Name=SH03_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07825;old_locus_tag=SH03_07820 NZ_CP010441.1 Protein Homology CDS 1582828 1584069 . - 0 ID=cds1503;Parent=gene1562;Dbxref=Genbank:WP_000650337.1;Name=WP_000650337.1;gbkey=CDS;product=cardiolipin synthase B;protein_id=WP_000650337.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1584066 1584827 . - . ID=gene1563;Name=SH03_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07830;old_locus_tag=SH03_07825 NZ_CP010441.1 Protein Homology CDS 1584066 1584827 . - 0 ID=cds1504;Parent=gene1563;Dbxref=Genbank:WP_001113348.1;Name=WP_001113348.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001113348.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1584960 1585370 . + . ID=gene1564;Name=SH03_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07835;old_locus_tag=SH03_07830 NZ_CP010441.1 Protein Homology CDS 1584960 1585370 . + 0 ID=cds1505;Parent=gene1564;Dbxref=Genbank:WP_000871982.1;Name=WP_000871982.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000871982.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1585332 1586438 . - . ID=gene1565;Name=SH03_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07840;old_locus_tag=SH03_07835 NZ_CP010441.1 Protein Homology CDS 1585332 1586438 . - 0 ID=cds1506;Parent=gene1565;Dbxref=Genbank:WP_000469031.1;Name=WP_000469031.1;gbkey=CDS;product=inner membrane transport permease YbhR;protein_id=WP_000469031.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1586449 1587582 . - . ID=gene1566;Name=SH03_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07845;old_locus_tag=SH03_07840 NZ_CP010441.1 Protein Homology CDS 1586449 1587582 . - 0 ID=cds1507;Parent=gene1566;Dbxref=Genbank:WP_000070131.1;Name=WP_000070131.1;gbkey=CDS;product=inner membrane transport permease YbhS;protein_id=WP_000070131.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1587575 1589311 . - . ID=gene1567;Name=SH03_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07850;old_locus_tag=SH03_07845 NZ_CP010441.1 Protein Homology CDS 1587575 1589311 . - 0 ID=cds1508;Parent=gene1567;Dbxref=Genbank:WP_000996107.1;Name=WP_000996107.1;gbkey=CDS;product=ABC transporter ATPase;protein_id=WP_000996107.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1589304 1590299 . - . ID=gene1568;Name=SH03_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07855;old_locus_tag=SH03_07850 NZ_CP010441.1 Protein Homology CDS 1589304 1590299 . - 0 ID=cds1509;Parent=gene1568;Dbxref=Genbank:WP_001393495.1;Name=WP_001393495.1;gbkey=CDS;product=transporter;protein_id=WP_001393495.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1590302 1590973 . - . ID=gene1569;Name=SH03_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07860;old_locus_tag=SH03_07855 NZ_CP010441.1 Protein Homology CDS 1590302 1590973 . - 0 ID=cds1510;Parent=gene1569;Dbxref=Genbank:WP_001296991.1;Name=WP_001296991.1;gbkey=CDS;product=DUF1956 domain-containing tetR family transcriptional regulator;protein_id=WP_001296991.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1591202 1592566 . + . ID=gene1570;Name=SH03_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07865;old_locus_tag=SH03_07860 NZ_CP010441.1 Protein Homology CDS 1591202 1592566 . + 0 ID=cds1511;Parent=gene1570;Dbxref=Genbank:WP_000007101.1;Name=WP_000007101.1;Note=this helicase is not essential cell growth;gbkey=CDS;product=ATP-dependent RNA helicase RhlE;protein_id=WP_000007101.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1592618 1592717 . + . ID=id116;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1592798 1593247 . - . ID=gene1571;Name=SH03_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07870;old_locus_tag=SH03_07865 NZ_CP010441.1 Protein Homology CDS 1592798 1593247 . - 0 ID=cds1512;Parent=gene1571;Dbxref=Genbank:WP_001154308.1;Name=WP_001154308.1;gbkey=CDS;product=swarming motility protein;protein_id=WP_001154308.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1593400 1595550 . + . ID=gene1572;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=SH03_RS07875;old_locus_tag=SH03_07870 NZ_CP010441.1 Protein Homology CDS 1593400 1595550 . + 0 ID=cds1513;Parent=gene1572;Dbxref=Genbank:WP_001340191.1;Name=WP_001340191.1;Note=helicase involved in DNA repair and perhaps also replication;gbkey=CDS;gene=dinG;product=ATP-dependent helicase DinG;protein_id=WP_001340191.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1595578 1596540 . + . ID=gene1573;Name=SH03_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07880;old_locus_tag=SH03_07875 NZ_CP010441.1 Protein Homology CDS 1595578 1596540 . + 0 ID=cds1514;Parent=gene1573;Dbxref=Genbank:WP_000386551.1;Name=WP_000386551.1;gbkey=CDS;product=family 3 glycosyltransferase;protein_id=WP_000386551.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1596681 1597766 . + . ID=gene1574;Name=SH03_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07885;old_locus_tag=SH03_07880 NZ_CP010441.1 Protein Homology CDS 1596681 1597766 . + 0 ID=cds1515;Parent=gene1574;Dbxref=Genbank:WP_000443530.1;Name=WP_000443530.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_000443530.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1597995 1598255 . - . ID=gene1575;Name=SH03_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07890;old_locus_tag=SH03_07885 NZ_CP010441.1 Protein Homology CDS 1597995 1598255 . - 0 ID=cds1516;Parent=gene1575;Dbxref=Genbank:WP_000849301.1;Name=WP_000849301.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000849301.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1598520 1598786 . - . ID=gene1576;Name=SH03_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07895;old_locus_tag=SH03_07890 NZ_CP010441.1 Protein Homology CDS 1598520 1598786 . - 0 ID=cds1517;Parent=gene1576;Dbxref=Genbank:WP_000146343.1;Name=WP_000146343.1;gbkey=CDS;product=RNA polymerase-binding protein DksA;protein_id=WP_000146343.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1598860 1599537 . - . ID=gene1577;Name=SH03_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07900;old_locus_tag=SH03_07895 NZ_CP010441.1 Protein Homology CDS 1598860 1599537 . - 0 ID=cds1518;Parent=gene1577;Dbxref=Genbank:WP_000990177.1;Name=WP_000990177.1;gbkey=CDS;product=PKHD-type hydroxylase;protein_id=WP_000990177.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1599579 1601861 . - . ID=gene1578;Name=SH03_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07905;old_locus_tag=SH03_07900 NZ_CP010441.1 Protein Homology CDS 1599579 1601861 . - 0 ID=cds1519;Parent=gene1578;Dbxref=Genbank:WP_000430057.1;Name=WP_000430057.1;Note=Fiu%3B YbiL%3B porin involved in the uptake of iron complexed with catecholate siderophores (e.g. dihydroxybenzoylserine%2C dihydroxybenzoate) and beta lactam agents%3B Fiu interacts with TonB which provides the energy required for transport across the outer membrane%3B acts as a receptor for iron-siderophores and microcins E492%2C M%2C and H47%3B outer membrane protein;gbkey=CDS;product=catecholate siderophore receptor Fiu;protein_id=WP_000430057.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1602126 1602386 . - . ID=gene1579;Name=SH03_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07910;old_locus_tag=SH03_07905 NZ_CP010441.1 Protein Homology CDS 1602126 1602386 . - 0 ID=cds1520;Parent=gene1579;Dbxref=Genbank:WP_000710619.1;Name=WP_000710619.1;gbkey=CDS;product=colanic acid mucoidy stimulation protein;protein_id=WP_000710619.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1602662 1603588 . + . ID=gene1580;Name=SH03_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07915;old_locus_tag=SH03_07910 NZ_CP010441.1 Protein Homology CDS 1602662 1603588 . + 0 ID=cds1521;Parent=gene1580;Dbxref=Genbank:WP_001295299.1;Name=WP_001295299.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase F;protein_id=WP_001295299.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1603585 1605810 . - . ID=gene1581;Name=SH03_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07920;old_locus_tag=SH03_07915 NZ_CP010441.1 Protein Homology CDS 1603585 1605810 . - 0 ID=cds1522;Parent=gene1581;Dbxref=Genbank:WP_001267253.1;Name=WP_001267253.1;gbkey=CDS;product=moderate conductance mechanosensitive channel YbiO;protein_id=WP_001267253.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1606071 1606793 . - . ID=gene1582;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=SH03_RS07925;old_locus_tag=SH03_07920 NZ_CP010441.1 Protein Homology CDS 1606071 1606793 . - 0 ID=cds1523;Parent=gene1582;Dbxref=Genbank:WP_000569083.1;Name=WP_000569083.1;Note=similar to ATP-binding component of ABC transporters;gbkey=CDS;gene=glnQ;product=glutamine transport ATP-binding protein GlnQ;protein_id=WP_000569083.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1606790 1607449 . - . ID=gene1583;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=SH03_RS07930;old_locus_tag=SH03_07925 NZ_CP010441.1 Protein Homology CDS 1606790 1607449 . - 0 ID=cds1524;Parent=gene1583;Dbxref=Genbank:WP_001159065.1;Name=WP_001159065.1;Note=similar to permease component of ABC transporters%3B mutations impair ability of Escherichia coli to transport and utilize glutamine;gbkey=CDS;gene=glnP;product=glutamine ABC transporter permease;protein_id=WP_001159065.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1607588 1608334 . - . ID=gene1584;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=SH03_RS07935;old_locus_tag=SH03_07930 NZ_CP010441.1 Protein Homology CDS 1607588 1608334 . - 0 ID=cds1525;Parent=gene1584;Dbxref=Genbank:WP_000843866.1;Name=WP_000843866.1;Note=similar to periplasmic-binding component of ABC transporters;gbkey=CDS;gene=glnH;product=glutamine-binding periplasmic protein;protein_id=WP_000843866.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1608380 1608673 . - . ID=gene1585;Name=SH03_RS07940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS07940;pseudo=true NZ_CP010441.1 Protein Homology CDS 1608380 1608673 . - 0 ID=cds1526;Parent=gene1585;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(1608614..1608616)%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq gene 1608738 1609241 . - . ID=gene1586;Name=SH03_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07945;old_locus_tag=SH03_07940 NZ_CP010441.1 Protein Homology CDS 1608738 1609241 . - 0 ID=cds1527;Parent=gene1586;Dbxref=Genbank:WP_000100800.1;Name=WP_000100800.1;Note=binds DNA in a non-sequence-specific manner and is abundant during stationary phase%3B forms a DNA-protein crystal that protects DNA from damage%3B required for normal starvation response and long-term stationary viability%3B forms a homododecameric complex and sequesters iron which provides protection against oxidative damage;gbkey=CDS;product=DNA protection during starvation protein;protein_id=WP_000100800.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1609540 1610427 . - . ID=gene1587;Name=SH03_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07950;old_locus_tag=SH03_07945 NZ_CP010441.1 Protein Homology CDS 1609540 1610427 . - 0 ID=cds1528;Parent=gene1587;Dbxref=Genbank:WP_001295297.1;Name=WP_001295297.1;gbkey=CDS;product=threonine/homoserine exporter RhtA;protein_id=WP_001295297.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1610780 1611295 . + . ID=gene1588;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=SH03_RS07955;old_locus_tag=SH03_07950 NZ_CP010441.1 Protein Homology CDS 1610780 1611295 . + 0 ID=cds1529;Parent=gene1588;Dbxref=Genbank:WP_001295296.1;Name=WP_001295296.1;Note=OmpX%3B involved in cell adhesion%3B forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface%3B mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains;gbkey=CDS;gene=ompX;product=outer membrane protein X;protein_id=WP_001295296.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1611344 1612927 . - . ID=gene1589;Name=SH03_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07960;old_locus_tag=SH03_07955 NZ_CP010441.1 Protein Homology CDS 1611344 1612927 . - 0 ID=cds1530;Parent=gene1589;Dbxref=Genbank:WP_001054678.1;Name=WP_001054678.1;gbkey=CDS;product=phosphoethanolamine transferase OpgE;protein_id=WP_001054678.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1613199 1613327 . - . ID=gene1590;Name=SH03_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07965;old_locus_tag=SH03_07960 NZ_CP010441.1 Protein Homology CDS 1613199 1613327 . - 0 ID=cds1531;Parent=gene1590;Dbxref=Genbank:WP_001001761.1;Name=WP_001001761.1;gbkey=CDS;product=small protein MntS;protein_id=WP_001001761.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1613513 1613980 . + . ID=gene1591;Name=SH03_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07970;old_locus_tag=SH03_07965 NZ_CP010441.1 Protein Homology CDS 1613513 1613980 . + 0 ID=cds1532;Parent=gene1591;Dbxref=Genbank:WP_000091016.1;Name=WP_000091016.1;Note=Transcriptional regulator that represses the manganese transporter MntH when manganese is present;gbkey=CDS;product=transcriptional regulator MntR;protein_id=WP_000091016.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1613977 1615095 . + . ID=gene1592;Name=SH03_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07975;old_locus_tag=SH03_07970 NZ_CP010441.1 Protein Homology CDS 1613977 1615095 . + 0 ID=cds1533;Parent=gene1592;Dbxref=Genbank:WP_000056457.1;Name=WP_000056457.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000056457.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1615154 1616074 . - . ID=gene1593;Name=SH03_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07980;old_locus_tag=SH03_07975 NZ_CP010441.1 Protein Homology CDS 1615154 1616074 . - 0 ID=cds1534;Parent=gene1593;Dbxref=Genbank:WP_001056384.1;Name=WP_001056384.1;gbkey=CDS;product=transpeptidase;protein_id=WP_001056384.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1616293 1617885 . + . ID=gene1594;Name=SH03_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07985;old_locus_tag=SH03_07980 NZ_CP010441.1 Protein Homology CDS 1616293 1617885 . + 0 ID=cds1535;Parent=gene1594;Dbxref=Genbank:WP_000961458.1;Name=WP_000961458.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_000961458.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1618126 1619391 . - . ID=gene1595;Name=SH03_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07990;old_locus_tag=SH03_07985 NZ_CP010441.1 Protein Homology CDS 1618126 1619391 . - 0 ID=cds1536;Parent=gene1595;Dbxref=Genbank:WP_000168797.1;Name=WP_000168797.1;gbkey=CDS;product=DUF1479 domain-containing protein;protein_id=WP_000168797.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1619543 1620358 . - . ID=gene1596;Name=SH03_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS07995;old_locus_tag=SH03_07990 NZ_CP010441.1 Protein Homology CDS 1619543 1620358 . - 0 ID=cds1537;Parent=gene1596;Dbxref=Genbank:WP_000114272.1;Name=WP_000114272.1;gbkey=CDS;product=sugar phosphatase YbiV;protein_id=WP_000114272.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1620504 1622936 . - . ID=gene1597;Name=SH03_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08000;old_locus_tag=SH03_07995 NZ_CP010441.1 Protein Homology CDS 1620504 1622936 . - 0 ID=cds1538;Parent=gene1597;Dbxref=Genbank:WP_000209309.1;Name=WP_000209309.1;gbkey=CDS;product=pyruvate formate lyase;protein_id=WP_000209309.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1622942 1623841 . - . ID=gene1598;Name=SH03_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08005;old_locus_tag=SH03_08000 NZ_CP010441.1 Protein Homology CDS 1622942 1623841 . - 0 ID=cds1539;Parent=gene1598;Dbxref=Genbank:WP_001295295.1;Name=WP_001295295.1;gbkey=CDS;product=pyruvate formate lyase activating enzyme;protein_id=WP_001295295.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1623972 1624634 . + . ID=gene1599;Name=SH03_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08010;old_locus_tag=SH03_08005 NZ_CP010441.1 Protein Homology CDS 1623972 1624634 . + 0 ID=cds1540;Parent=gene1599;Dbxref=Genbank:WP_001336208.1;Name=WP_001336208.1;Note=similar to transaldolase from Escherichia coli%3B many organisms have multiple copies;gbkey=CDS;product=fructose-6-phosphate aldolase 1;protein_id=WP_001336208.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1624710 1625459 . - . ID=gene1600;Name=SH03_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08015;old_locus_tag=SH03_08010 NZ_CP010441.1 Protein Homology CDS 1624710 1625459 . - 0 ID=cds1541;Parent=gene1600;Dbxref=Genbank:WP_000829217.1;Name=WP_000829217.1;gbkey=CDS;product=molybdopterin-synthase adenylyltransferase;protein_id=WP_000829217.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1625459 1626694 . - . ID=gene1601;Name=SH03_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08020;old_locus_tag=SH03_08015 NZ_CP010441.1 Protein Homology CDS 1625459 1626694 . - 0 ID=cds1542;Parent=gene1601;Dbxref=Genbank:WP_000397340.1;Name=WP_000397340.1;Note=is involved in the formation of active molybdenum cofactor and the chelation of molybdenum;gbkey=CDS;product=molybdopterin molybdenumtransferase;protein_id=WP_000397340.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1626898 1627863 . + . ID=gene1602;Name=SH03_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08025;old_locus_tag=SH03_08020 NZ_CP010441.1 Protein Homology CDS 1626898 1627863 . + 0 ID=cds1543;Parent=gene1602;Dbxref=Genbank:WP_000513781.1;Name=WP_000513781.1;gbkey=CDS;product=isoaspartyl peptidase;protein_id=WP_000513781.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1627850 1629721 . + . ID=gene1603;Name=SH03_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08030;old_locus_tag=SH03_08025 NZ_CP010441.1 Protein Homology CDS 1627850 1629721 . + 0 ID=cds1544;Parent=gene1603;Dbxref=Genbank:WP_001301279.1;Name=WP_001301279.1;Note=with GsiBCD is involved in glutathione import%3B GsiA contains 2 ATP-binding domains;gbkey=CDS;product=glutathione import ATP-binding protein GsiA;protein_id=WP_001301279.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1629741 1631279 . + . ID=gene1604;Name=SH03_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08035;old_locus_tag=SH03_08030 NZ_CP010441.1 Protein Homology CDS 1629741 1631279 . + 0 ID=cds1545;Parent=gene1604;Dbxref=Genbank:WP_000090140.1;Name=WP_000090140.1;Note=with GsiACD is involved in the transport of glutathione into the cell;gbkey=CDS;product=glutathione-binding protein GsiB;protein_id=WP_000090140.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1631297 1632217 . + . ID=gene1605;Name=SH03_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08040;old_locus_tag=SH03_08035 NZ_CP010441.1 Protein Homology CDS 1631297 1632217 . + 0 ID=cds1546;Parent=gene1605;Dbxref=Genbank:WP_000936043.1;Name=WP_000936043.1;Note=with GsiABD is involved in the transport of glutathione into the cell;gbkey=CDS;product=glutathione ABC transporter permease;protein_id=WP_000936043.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1632220 1633131 . + . ID=gene1606;Name=SH03_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08045;old_locus_tag=SH03_08040 NZ_CP010441.1 Protein Homology CDS 1632220 1633131 . + 0 ID=cds1547;Parent=gene1606;Dbxref=Genbank:WP_001236051.1;Name=WP_001236051.1;Note=with GsiABD is involved in the transport of glutathione into the cell;gbkey=CDS;product=glutathione ABC transporter permease;protein_id=WP_001236051.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1633309 1635657 . + . ID=gene1607;Name=SH03_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08050;old_locus_tag=SH03_08045 NZ_CP010441.1 Protein Homology CDS 1633309 1635657 . + 0 ID=cds1548;Parent=gene1607;Dbxref=Genbank:WP_001360263.1;Name=WP_001360263.1;gbkey=CDS;product=cyclic-di-GMP phosphodiesterase;protein_id=WP_001360263.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1635665 1636993 . + . ID=gene1608;Name=SH03_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08055;old_locus_tag=SH03_08050 NZ_CP010441.1 Protein Homology CDS 1635665 1636993 . + 0 ID=cds1549;Parent=gene1608;Dbxref=Genbank:WP_000086904.1;Name=WP_000086904.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_000086904.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1637040 1638365 . - . ID=gene1609;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=SH03_RS08060;old_locus_tag=SH03_08055 NZ_CP010441.1 Protein Homology CDS 1637040 1638365 . - 0 ID=cds1550;Parent=gene1609;Dbxref=Genbank:WP_000049367.1;Name=WP_000049367.1;Note=catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit;gbkey=CDS;gene=rimO;product=ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_000049367.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1638578 1638961 . + . ID=gene1610;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;gene_synonym=yliH;locus_tag=SH03_RS08065;old_locus_tag=SH03_08060 NZ_CP010441.1 Protein Homology CDS 1638578 1638961 . + 0 ID=cds1551;Parent=gene1610;Dbxref=Genbank:WP_000497137.1;Name=WP_000497137.1;Note=BssS%3B regulator of biofilm through signal secretion%3B disruption of this gene in Escherichia coli led to effects on biofilm formation%2C alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing;gbkey=CDS;gene=bssR;product=biofilm regulator BssR;protein_id=WP_000497137.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1639072 1640187 . + . ID=gene1611;Name=SH03_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08070;old_locus_tag=SH03_08065 NZ_CP010441.1 Protein Homology CDS 1639072 1640187 . + 0 ID=cds1552;Parent=gene1611;Dbxref=Genbank:WP_000555031.1;Name=WP_000555031.1;gbkey=CDS;product=soluble aldose sugar dehydrogenase YliI;protein_id=WP_000555031.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1640184 1640810 . - . ID=gene1612;Name=SH03_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08075;old_locus_tag=SH03_08070 NZ_CP010441.1 Protein Homology CDS 1640184 1640810 . - 0 ID=cds1553;Parent=gene1612;Dbxref=Genbank:WP_001295292.1;Name=WP_001295292.1;gbkey=CDS;product=glutathione S-transferase;protein_id=WP_001295292.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1641057 1642259 . + . ID=gene1613;Name=SH03_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08080;old_locus_tag=SH03_08075 NZ_CP010441.1 Protein Homology CDS 1641057 1642259 . + 0 ID=cds1554;Parent=gene1613;Dbxref=Genbank:WP_001300708.1;Name=WP_001300708.1;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_001300708.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1642306 1643064 . - . ID=gene1614;Name=SH03_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08085;old_locus_tag=SH03_08080 NZ_CP010441.1 Protein Homology CDS 1642306 1643064 . - 0 ID=cds1555;Parent=gene1614;Dbxref=Genbank:WP_000450121.1;Name=WP_000450121.1;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_000450121.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1643122 1643718 . - . ID=gene1615;Name=SH03_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08090;old_locus_tag=SH03_08085 NZ_CP010441.1 Protein Homology CDS 1643122 1643718 . - 0 ID=cds1556;Parent=gene1615;Dbxref=Genbank:WP_001295291.1;Name=WP_001295291.1;gbkey=CDS;product=undecaprenyl pyrophosphate phosphatase;protein_id=WP_001295291.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1644003 1645235 . + . ID=gene1616;Name=SH03_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08095;old_locus_tag=SH03_08090 NZ_CP010441.1 Protein Homology CDS 1644003 1645235 . + 0 ID=cds1557;Parent=gene1616;Dbxref=Genbank:WP_001180089.1;Name=WP_001180089.1;gbkey=CDS;product=multidrug transporter MdfA;protein_id=WP_001180089.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1645276 1645554 . - . ID=gene1617;Name=SH03_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08100;old_locus_tag=SH03_08095 NZ_CP010441.1 Protein Homology CDS 1645276 1645554 . - 0 ID=cds1558;Parent=gene1617;Dbxref=Genbank:WP_001295900.1;Name=WP_001295900.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001295900.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1645646 1646461 . - . ID=gene1618;Name=SH03_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08105;old_locus_tag=SH03_08100 NZ_CP010441.1 Protein Homology CDS 1645646 1646461 . - 0 ID=cds1559;Parent=gene1618;Dbxref=Genbank:WP_000023565.1;Name=WP_000023565.1;gbkey=CDS;product=flavin mononucleotide phosphatase YbjI;protein_id=WP_000023565.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1646461 1647669 . - . ID=gene1619;Name=SH03_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08110;old_locus_tag=SH03_08105 NZ_CP010441.1 Protein Homology CDS 1646461 1647669 . - 0 ID=cds1560;Parent=gene1619;Dbxref=Genbank:WP_000217859.1;Name=WP_000217859.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000217859.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1647753 1648289 . + . ID=gene1620;Name=SH03_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08115;old_locus_tag=SH03_08110 NZ_CP010441.1 Protein Homology CDS 1647753 1648289 . + 0 ID=cds1561;Parent=gene1620;Dbxref=Genbank:WP_001295289.1;Name=WP_001295289.1;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=WP_001295289.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1648464 1650149 . - . ID=gene1621;Name=SH03_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08120;old_locus_tag=SH03_08115 NZ_CP010441.1 Protein Homology CDS 1648464 1650149 . - 0 ID=cds1562;Parent=gene1621;Dbxref=Genbank:WP_001024876.1;Name=WP_001024876.1;gbkey=CDS;product=transporter;protein_id=WP_001024876.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1650419 1650796 . + . ID=gene1622;Name=SH03_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08125;old_locus_tag=SH03_08120 NZ_CP010441.1 Protein Homology CDS 1650419 1650796 . + 0 ID=cds1563;Parent=gene1622;Dbxref=Genbank:WP_000681108.1;Name=WP_000681108.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000681108.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1650826 1651083 . - . ID=gene1623;Name=SH03_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08130;old_locus_tag=SH03_08125 NZ_CP010441.1 Protein Homology CDS 1650826 1651083 . - 0 ID=cds1564;Parent=gene1623;Dbxref=Genbank:WP_001195240.1;Name=WP_001195240.1;Note=functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase%3B also involved in reducing some disulfides in a coupled system with glutathione reductase;gbkey=CDS;product=glutaredoxin;protein_id=WP_001195240.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1651243 1651530 . + . ID=gene1624;Name=SH03_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08135;old_locus_tag=SH03_08130 NZ_CP010441.1 Protein Homology CDS 1651243 1651530 . + 0 ID=cds1565;Parent=gene1624;Dbxref=Genbank:WP_001201560.1;Name=WP_001201560.1;Note=YbjC%3B located in the same operon as the nfsA gene%3B member of the soxRS regulon which mediates in part the increased levels of superoxide in response to oxidative stress%3B induced by paraquat%3B regulated by SoxS%3B unknown function;gbkey=CDS;product=DUF1418 domain-containing protein;protein_id=WP_001201560.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1651514 1652236 . + . ID=gene1625;Name=SH03_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08140;old_locus_tag=SH03_08135 NZ_CP010441.1 Protein Homology CDS 1651514 1652236 . + 0 ID=cds1566;Parent=gene1625;Dbxref=Genbank:WP_000189159.1;Name=WP_000189159.1;Note=NADPH-dependent%3B oxygen-insensitive%3B catalyzes the reduction of nitroaromatic compounds;gbkey=CDS;product=oxygen-insensitive NADPH nitroreductase;protein_id=WP_000189159.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1652297 1653199 . + . ID=gene1626;Name=SH03_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08145;old_locus_tag=SH03_08140 NZ_CP010441.1 Protein Homology CDS 1652297 1653199 . + 0 ID=cds1567;Parent=gene1626;Dbxref=Genbank:WP_000684321.1;Name=WP_000684321.1;Note=responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6;gbkey=CDS;product=ribosomal protein S6--L-glutamate ligase;protein_id=WP_000684321.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1653287 1653763 . + . ID=gene1627;Name=SH03_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08150;old_locus_tag=SH03_08145 NZ_CP010441.1 Protein Homology CDS 1653287 1653763 . + 0 ID=cds1568;Parent=gene1627;Dbxref=Genbank:WP_000203025.1;Name=WP_000203025.1;gbkey=CDS;product=negative regulator of motility%3B multicopy suppressor of coaA(Ts);protein_id=WP_000203025.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1653969 1654130 . + . ID=gene1628;Name=SH03_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08155;old_locus_tag=SH03_08150 NZ_CP010441.1 Protein Homology CDS 1653969 1654130 . + 0 ID=cds1569;Parent=gene1628;Dbxref=Genbank:WP_001303977.1;Name=WP_001303977.1;gbkey=CDS;product=putrescine/spermidine ABC transporter substrate-binding protein;protein_id=WP_001303977.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1654114 1655226 . + . ID=gene1629;Name=SH03_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08160;old_locus_tag=SH03_08155 NZ_CP010441.1 Protein Homology CDS 1654114 1655226 . + 0 ID=cds1570;Parent=gene1629;Dbxref=Genbank:WP_000126072.1;Name=WP_000126072.1;gbkey=CDS;product=putrescine-binding periplasmic protein;protein_id=WP_000126072.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1655321 1656454 . + . ID=gene1630;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=SH03_RS08165;old_locus_tag=SH03_08160 NZ_CP010441.1 Protein Homology CDS 1655321 1656454 . + 0 ID=cds1571;Parent=gene1630;Dbxref=Genbank:WP_000996005.1;Name=WP_000996005.1;Note=part of the PotFGHI ATP-dependent putrescine transporter;gbkey=CDS;gene=potG;product=putrescine transport ATP-binding protein PotG;protein_id=WP_000996005.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1656464 1657417 . + . ID=gene1631;Name=SH03_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08170;old_locus_tag=SH03_08165 NZ_CP010441.1 Protein Homology CDS 1656464 1657417 . + 0 ID=cds1572;Parent=gene1631;Dbxref=Genbank:WP_000105430.1;Name=WP_000105430.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_000105430.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1657414 1658259 . + . ID=gene1632;Name=SH03_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08175;old_locus_tag=SH03_08170 NZ_CP010441.1 Protein Homology CDS 1657414 1658259 . + 0 ID=cds1573;Parent=gene1632;Dbxref=Genbank:WP_001061658.1;Name=WP_001061658.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_001061658.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1658319 1658807 . + . ID=gene1633;Name=SH03_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08180;old_locus_tag=SH03_08175 NZ_CP010441.1 Protein Homology CDS 1658319 1658807 . + 0 ID=cds1574;Parent=gene1633;Dbxref=Genbank:WP_000389260.1;Name=WP_000389260.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000389260.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1658848 1659975 . + . ID=gene1634;Name=rumB;gbkey=Gene;gene=rumB;gene_biotype=protein_coding;locus_tag=SH03_RS08185;old_locus_tag=SH03_08180 NZ_CP010441.1 Protein Homology CDS 1658848 1659975 . + 0 ID=cds1575;Parent=gene1634;Dbxref=Genbank:WP_001149682.1;Name=WP_001149682.1;Note=RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA;gbkey=CDS;gene=rumB;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_001149682.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1660174 1660905 . - . ID=gene1635;Name=SH03_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08190;old_locus_tag=SH03_08185 NZ_CP010441.1 Protein Homology CDS 1660174 1660905 . - 0 ID=cds1576;Parent=gene1635;Dbxref=Genbank:WP_001295339.1;Name=WP_001295339.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;product=ABC transporter arginine-binding protein 1;protein_id=WP_001295339.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1661196 1661864 . - . ID=gene1636;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=SH03_RS08195;old_locus_tag=SH03_08190 NZ_CP010441.1 Protein Homology CDS 1661196 1661864 . - 0 ID=cds1577;Parent=gene1636;Dbxref=Genbank:WP_000464491.1;Name=WP_000464491.1;Note=with ArtPQJI acts to transport arginine across the inner membrane;gbkey=CDS;gene=artM;product=arginine ABC transporter permease ArtM;protein_id=WP_000464491.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1661864 1662580 . - . ID=gene1637;Name=SH03_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08200;old_locus_tag=SH03_08195 NZ_CP010441.1 Protein Homology CDS 1661864 1662580 . - 0 ID=cds1578;Parent=gene1637;Dbxref=Genbank:WP_001001691.1;Name=WP_001001691.1;Note=with ArtPMJI transports arginine across the inner membrane;gbkey=CDS;product=arginine ABC transporter permease ArtQ;protein_id=WP_001001691.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1662587 1663318 . - . ID=gene1638;Name=SH03_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08205;old_locus_tag=SH03_08200 NZ_CP010441.1 Protein Homology CDS 1662587 1663318 . - 0 ID=cds1579;Parent=gene1638;Dbxref=Genbank:WP_000756569.1;Name=WP_000756569.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;product=arginine ABC transporter substrate-binding protein;protein_id=WP_000756569.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1663336 1664064 . - . ID=gene1639;Name=SH03_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08210;old_locus_tag=SH03_08205 NZ_CP010441.1 Protein Homology CDS 1663336 1664064 . - 0 ID=cds1580;Parent=gene1639;Dbxref=Genbank:WP_000027205.1;Name=WP_000027205.1;gbkey=CDS;product=arginine transport ATP-binding protein ArtP;protein_id=WP_000027205.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1664282 1664797 . - . ID=gene1640;Name=SH03_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08215;old_locus_tag=SH03_08210 NZ_CP010441.1 Protein Homology CDS 1664282 1664797 . - 0 ID=cds1581;Parent=gene1640;Dbxref=Genbank:WP_001270734.1;Name=WP_001270734.1;Note=induced during stationary phase and by acivicin (a glutamine analog)%3B regulated by Lrp and RpoS;gbkey=CDS;product=lipoprotein;protein_id=WP_001270734.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1664923 1665246 . + . ID=gene1641;Name=SH03_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08220;old_locus_tag=SH03_08215 NZ_CP010441.1 Protein Homology CDS 1664923 1665246 . + 0 ID=cds1582;Parent=gene1641;Dbxref=Genbank:WP_001160737.1;Name=WP_001160737.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001160737.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1665243 1666073 . + . ID=gene1642;Name=SH03_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08225;old_locus_tag=SH03_08220 NZ_CP010441.1 Protein Homology CDS 1665243 1666073 . + 0 ID=cds1583;Parent=gene1642;Dbxref=Genbank:WP_001252135.1;Name=WP_001252135.1;Note=catalyzes the cleavage of the bond between muamic acid and l-alanine;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_001252135.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1666070 1667083 . - . ID=gene1643;Name=SH03_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08230;old_locus_tag=SH03_08225 NZ_CP010441.1 Protein Homology CDS 1666070 1667083 . - 0 ID=cds1584;Parent=gene1643;Dbxref=Genbank:WP_001338420.1;Name=WP_001338420.1;gbkey=CDS;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_001338420.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1667182 1668612 . - . ID=gene1644;Name=SH03_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08235;old_locus_tag=SH03_08230 NZ_CP010441.1 Protein Homology CDS 1667182 1668612 . - 0 ID=cds1585;Parent=gene1644;Dbxref=Genbank:WP_001136554.1;Name=WP_001136554.1;gbkey=CDS;product=NAD-dependent oxidoreductase;protein_id=WP_001136554.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1668623 1669624 . - . ID=gene1645;Name=SH03_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08240;old_locus_tag=SH03_08235 NZ_CP010441.1 Protein Homology CDS 1668623 1669624 . - 0 ID=cds1586;Parent=gene1645;Dbxref=Genbank:WP_000566376.1;Name=WP_000566376.1;Note=low- specificity%3B catalyzes the formation of acetaldehyde and glycine from L-threonine%3B acts on L-threonine%2C L-allo-threonine%2C L-threo-phenylserine%2C and L-erythro-phenylserine;gbkey=CDS;product=low specificity L-threonine aldolase;protein_id=WP_000566376.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1669661 1671379 . - . ID=gene1646;Name=SH03_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08245;old_locus_tag=SH03_08240 NZ_CP010441.1 Protein Homology CDS 1669661 1671379 . - 0 ID=cds1587;Parent=gene1646;Dbxref=Genbank:WP_000815337.1;Name=WP_000815337.1;Note=catalyzes the formation of acetate from pyruvate;gbkey=CDS;product=pyruvate dehydrogenase [ubiquinone];protein_id=WP_000815337.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1671512 1672480 . - . ID=gene1647;Name=SH03_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08250;old_locus_tag=SH03_08245 NZ_CP010441.1 Protein Homology CDS 1671512 1672480 . - 0 ID=cds1588;Parent=gene1647;Dbxref=Genbank:WP_000178677.1;Name=WP_000178677.1;gbkey=CDS;product=NADH oxidoreductase HCR;protein_id=WP_000178677.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1672492 1674144 . - . ID=gene1648;Name=SH03_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08255;old_locus_tag=SH03_08250 NZ_CP010441.1 Protein Homology CDS 1672492 1674144 . - 0 ID=cds1589;Parent=gene1648;Dbxref=Genbank:WP_000458809.1;Name=WP_000458809.1;gbkey=CDS;product=hydroxylamine reductase;protein_id=WP_000458809.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1674288 1675187 . - . ID=gene1649;Name=SH03_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08260;old_locus_tag=SH03_08255 NZ_CP010441.1 Protein Homology CDS 1674288 1675187 . - 0 ID=cds1590;Parent=gene1649;Dbxref=Genbank:WP_000491142.1;Name=WP_000491142.1;gbkey=CDS;product=transporter;protein_id=WP_000491142.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1675357 1675576 . + . ID=id117;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1675682 1676377 . - . ID=gene1650;Name=SH03_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08265;old_locus_tag=SH03_08260 NZ_CP010441.1 Protein Homology CDS 1675682 1676377 . - 0 ID=cds1591;Parent=gene1650;Dbxref=Genbank:WP_001298299.1;Name=WP_001298299.1;Note=porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure;gbkey=CDS;product=aquaporin Z;protein_id=WP_001298299.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1676590 1676745 . - . ID=gene1651;Name=SH03_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08270;old_locus_tag=SH03_08265 NZ_CP010441.1 Protein Homology CDS 1676590 1676745 . - 0 ID=cds1592;Parent=gene1651;Dbxref=Genbank:WP_000908266.1;Name=WP_000908266.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000908266.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1676803 1678461 . + . ID=gene1652;Name=SH03_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08275;old_locus_tag=SH03_08270 NZ_CP010441.1 Protein Homology CDS 1676803 1678461 . + 0 ID=cds1593;Parent=gene1652;Dbxref=Genbank:WP_000599802.1;Name=WP_000599802.1;gbkey=CDS;product=OLD family ATP-dependent endonuclease%3B DUF2813 family protein;protein_id=WP_000599802.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1678458 1679450 . - . ID=gene1653;Name=SH03_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08280;old_locus_tag=SH03_08275 NZ_CP010441.1 Protein Homology CDS 1678458 1679450 . - 0 ID=cds1594;Parent=gene1653;Dbxref=Genbank:WP_000241033.1;Name=WP_000241033.1;gbkey=CDS;product=DUF535 domain-containing protein;protein_id=WP_000241033.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1679565 1680680 . + . ID=gene1654;Name=SH03_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08285;old_locus_tag=SH03_08280 NZ_CP010441.1 Protein Homology CDS 1679565 1680680 . + 0 ID=cds1595;Parent=gene1654;Dbxref=Genbank:WP_000746442.1;Name=WP_000746442.1;Note=confers macrolide resistance via active drug efflux;gbkey=CDS;product=MacA family efflux pump subunit;protein_id=WP_000746442.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1680677 1682623 . + . ID=gene1655;Name=SH03_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08290;old_locus_tag=SH03_08285 NZ_CP010441.1 Protein Homology CDS 1680677 1682623 . + 0 ID=cds1596;Parent=gene1655;Dbxref=Genbank:WP_000188144.1;Name=WP_000188144.1;Note=with MacA is involved in the export of macrolide;gbkey=CDS;product=macrolide export ATP-binding/permease MacB;protein_id=WP_000188144.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1682696 1682920 . - . ID=gene1656;Name=SH03_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08295;old_locus_tag=SH03_08290 NZ_CP010441.1 Protein Homology CDS 1682696 1682920 . - 0 ID=cds1597;Parent=gene1656;Dbxref=Genbank:WP_000410785.1;Name=WP_000410785.1;Note=inhibits DNA replication at both initiation and elongation steps%3B stationary phase and starvation inducible;gbkey=CDS;product=cold-shock protein CspD;protein_id=WP_000410785.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1683243 1683563 . + . ID=gene1657;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=SH03_RS08300;old_locus_tag=SH03_08295 NZ_CP010441.1 Protein Homology CDS 1683243 1683563 . + 0 ID=cds1598;Parent=gene1657;Dbxref=Genbank:WP_000520781.1;Name=WP_000520781.1;Note=involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation%3B binds to the N-terminal domain of the chaperone ClpA;gbkey=CDS;gene=clpS;product=ATP-dependent Clp protease adapter protein ClpS;protein_id=WP_000520781.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1683594 1685870 . + . ID=gene1658;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=SH03_RS08305;old_locus_tag=SH03_08300 NZ_CP010441.1 Protein Homology CDS 1683594 1685870 . + 0 ID=cds1599;Parent=gene1658;Dbxref=Genbank:WP_000934041.1;Name=WP_000934041.1;Note=ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates;gbkey=CDS;gene=clpA;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_000934041.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1686171 1686308 . + . ID=id118;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1686214 1686301 . - . ID=gene1659;Name=SH03_RS08310;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS08310;old_locus_tag=SH03_08305 NZ_CP010441.1 tRNAscan-SE tRNA 1686214 1686301 . - . ID=rna59;Parent=gene1659;anticodon=(pos:complement(1686265..1686267));gbkey=tRNA;product=tRNA-Ser NZ_CP010441.1 tRNAscan-SE exon 1686214 1686301 . - . ID=id119;Parent=rna59;anticodon=(pos:complement(1686265..1686267));gbkey=tRNA;product=tRNA-Ser NZ_CP010441.1 RefSeq gene 1686555 1686773 . - . ID=gene1660;Name=SH03_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08315;old_locus_tag=SH03_08310 NZ_CP010441.1 Protein Homology CDS 1686555 1686773 . - 0 ID=cds1600;Parent=gene1660;Dbxref=Genbank:WP_001040187.1;Name=WP_001040187.1;gbkey=CDS;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1687058 1687762 . - . ID=gene1661;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=SH03_RS08320;old_locus_tag=SH03_08315 NZ_CP010441.1 Protein Homology CDS 1687058 1687762 . - 0 ID=cds1601;Parent=gene1661;Dbxref=Genbank:WP_001241678.1;Name=WP_001241678.1;Note=leucyltransferase%3B phenylalanyltransferse%3B functions in the N-end rule pathway%3B transfers Leu%2C Phe%2C Met%2C from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys;gbkey=CDS;gene=aat;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_001241678.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1687804 1689525 . - . ID=gene1662;Name=SH03_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08325;old_locus_tag=SH03_08320 NZ_CP010441.1 Protein Homology CDS 1687804 1689525 . - 0 ID=cds1602;Parent=gene1662;Dbxref=Genbank:WP_001202177.1;Name=WP_001202177.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;product=ATP-binding/permease CydC;protein_id=WP_001202177.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1689526 1691292 . - . ID=gene1663;Name=SH03_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08330;old_locus_tag=SH03_08325 NZ_CP010441.1 Protein Homology CDS 1689526 1691292 . - 0 ID=cds1603;Parent=gene1663;Dbxref=Genbank:WP_001043598.1;Name=WP_001043598.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;product=ATP-binding/permease CydD;protein_id=WP_001043598.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1691415 1692380 . - . ID=gene1664;Name=SH03_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08335;old_locus_tag=SH03_08330 NZ_CP010441.1 Protein Homology CDS 1691415 1692380 . - 0 ID=cds1604;Parent=gene1664;Dbxref=Genbank:WP_000537418.1;Name=WP_000537418.1;Note=catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding;gbkey=CDS;product=thioredoxin reductase;protein_id=WP_000537418.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1692925 1693419 . + . ID=gene1665;Name=SH03_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08340;old_locus_tag=SH03_08335 NZ_CP010441.1 Protein Homology CDS 1692925 1693419 . + 0 ID=cds1605;Parent=gene1665;Dbxref=Genbank:WP_000228473.1;Name=WP_000228473.1;Note=mediates a global response to leucine%3B acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system;gbkey=CDS;product=leucine-responsive regulatory protein;protein_id=WP_000228473.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1693554 1697543 . + . ID=gene1666;Name=SH03_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08345;old_locus_tag=SH03_08340 NZ_CP010441.1 Protein Homology CDS 1693554 1697543 . + 0 ID=cds1606;Parent=gene1666;Dbxref=Genbank:WP_000076967.1;Name=WP_000076967.1;Note=DNA-binding membrane protein required for chromosome resolution and partitioning;gbkey=CDS;product=cell division protein FtsK;protein_id=WP_000076967.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1697702 1698313 . + . ID=gene1667;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=SH03_RS08350;old_locus_tag=SH03_08345 NZ_CP010441.1 Protein Homology CDS 1697702 1698313 . + 0 ID=cds1607;Parent=gene1667;Dbxref=Genbank:WP_001295343.1;Name=WP_001295343.1;Note=participates with LolB in the incorporation of lipoprotein into the outer membrane;gbkey=CDS;gene=lolA;product=outer membrane lipoprotein carrier protein LolA;protein_id=WP_001295343.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1698324 1699667 . + . ID=gene1668;Name=SH03_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08355;old_locus_tag=SH03_08350 NZ_CP010441.1 Protein Homology CDS 1698324 1699667 . + 0 ID=cds1608;Parent=gene1668;Dbxref=Genbank:WP_000067755.1;Name=WP_000067755.1;gbkey=CDS;product=replication-associated recombination protein A;protein_id=WP_000067755.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1699758 1701050 . + . ID=gene1669;Name=SH03_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08360;old_locus_tag=SH03_08355 NZ_CP010441.1 Protein Homology CDS 1699758 1701050 . + 0 ID=cds1609;Parent=gene1669;Dbxref=Genbank:WP_000886683.1;Name=WP_000886683.1;gbkey=CDS;product=serine--tRNA ligase;protein_id=WP_000886683.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1701289 1703733 . + . ID=gene1670;Name=SH03_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08365;old_locus_tag=SH03_08360 NZ_CP010441.1 Protein Homology CDS 1701289 1703733 . + 0 ID=cds1610;Parent=gene1670;Dbxref=Genbank:WP_000850303.1;Name=WP_000850303.1;gbkey=CDS;product=dimethyl sulfoxide reductase DmsA;protein_id=WP_000850303.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1703744 1704361 . + . ID=gene1671;Name=SH03_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08370;old_locus_tag=SH03_08365 NZ_CP010441.1 Protein Homology CDS 1703744 1704361 . + 0 ID=cds1611;Parent=gene1671;Dbxref=Genbank:WP_000213098.1;Name=WP_000213098.1;Note=oxidoreductase%2C Fe-S subunit%3B terminal electron transfer protein for the reduction of DMSO;gbkey=CDS;product=dimethyl sulfoxide reductase subunit B;protein_id=WP_000213098.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1704363 1705226 . + . ID=gene1672;Name=SH03_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08375;old_locus_tag=SH03_08370 NZ_CP010441.1 Protein Homology CDS 1704363 1705226 . + 0 ID=cds1612;Parent=gene1672;Dbxref=Genbank:WP_000534637.1;Name=WP_000534637.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit C;protein_id=WP_000534637.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1705261 1705887 . - . ID=gene1673;Name=SH03_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08380;old_locus_tag=SH03_08375 NZ_CP010441.1 Protein Homology CDS 1705261 1705887 . - 0 ID=cds1613;Parent=gene1673;Dbxref=Genbank:WP_000165879.1;Name=WP_000165879.1;gbkey=CDS;product=isochorismatase;protein_id=WP_000165879.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1706201 1707349 . + . ID=gene1674;Name=SH03_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08385;old_locus_tag=SH03_08380 NZ_CP010441.1 Protein Homology CDS 1706201 1707349 . + 0 ID=cds1614;Parent=gene1674;Dbxref=Genbank:WP_000109259.1;Name=WP_000109259.1;gbkey=CDS;product=MFS transporter inner membrane protein;protein_id=WP_000109259.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1707559 1708989 . + . ID=gene1675;Name=SH03_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08390;old_locus_tag=SH03_08385 NZ_CP010441.1 Protein Homology CDS 1707559 1708989 . + 0 ID=cds1615;Parent=gene1675;Dbxref=Genbank:WP_000918506.1;Name=WP_000918506.1;gbkey=CDS;product=inner membrane transporter YcaM;protein_id=WP_000918506.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1708990 1709898 . - . ID=gene1676;Name=SH03_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08395;old_locus_tag=SH03_08390 NZ_CP010441.1 Protein Homology CDS 1708990 1709898 . - 0 ID=cds1616;Parent=gene1676;Dbxref=Genbank:WP_001242684.1;Name=WP_001242684.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_001242684.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1709998 1710588 . + . ID=gene1677;Name=SH03_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08400;old_locus_tag=SH03_08395 NZ_CP010441.1 Protein Homology CDS 1709998 1710588 . + 0 ID=cds1617;Parent=gene1677;Dbxref=Genbank:WP_001190363.1;Name=WP_001190363.1;gbkey=CDS;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_001190363.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1710670 1711410 . - . ID=gene1678;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=SH03_RS08405;old_locus_tag=SH03_08400 NZ_CP010441.1 Protein Homology CDS 1710670 1711410 . - 0 ID=cds1618;Parent=gene1678;Dbxref=Genbank:WP_000111043.1;Name=WP_000111043.1;Note=activates pyruvate formate-lyase 1 under anaerobic conditions;gbkey=CDS;gene=pflA;product=pyruvate formate-lyase 1-activating enzyme;protein_id=WP_000111043.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1711602 1713884 . - . ID=gene1679;Name=SH03_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08410;old_locus_tag=SH03_08405 NZ_CP010441.1 Protein Homology CDS 1711602 1713884 . - 0 ID=cds1619;Parent=gene1679;Dbxref=Genbank:WP_001292822.1;Name=WP_001292822.1;Note=formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate;gbkey=CDS;product=formate acetyltransferase 1;protein_id=WP_001292822.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1713939 1714796 . - . ID=gene1680;Name=SH03_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08415;old_locus_tag=SH03_08410 NZ_CP010441.1 Protein Homology CDS 1713939 1714796 . - 0 ID=cds1620;Parent=gene1680;Dbxref=Genbank:WP_000642546.1;Name=WP_000642546.1;gbkey=CDS;product=formate transporter FocA;protein_id=WP_000642546.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1715202 1716962 . - . ID=gene1681;Name=SH03_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08420;old_locus_tag=SH03_08415 NZ_CP010441.1 Protein Homology CDS 1715202 1716962 . - 0 ID=cds1621;Parent=gene1681;Dbxref=Genbank:WP_001295344.1;Name=WP_001295344.1;gbkey=CDS;product=ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_001295344.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1717092 1717784 . + . ID=gene1682;Name=SH03_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08425;old_locus_tag=SH03_08420 NZ_CP010441.1 Protein Homology CDS 1717092 1717784 . + 0 ID=cds1622;Parent=gene1682;Dbxref=Genbank:WP_000642849.1;Name=WP_000642849.1;gbkey=CDS;product=UPF0702 family inner membrane protein;protein_id=WP_000642849.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1717983 1719071 . + . ID=gene1683;Name=SH03_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08430;old_locus_tag=SH03_08425 NZ_CP010441.1 Protein Homology CDS 1717983 1719071 . + 0 ID=cds1623;Parent=gene1683;Dbxref=Genbank:WP_000057138.1;Name=WP_000057138.1;Note=catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B catalyzes 4 phosphohydroxy L-threonine from 2-oxo 3 hydroxy 4- phosphobutanoate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine;gbkey=CDS;product=phosphoserine aminotransferase;protein_id=WP_000057138.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1719142 1720425 . + . ID=gene1684;Name=SH03_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08435;old_locus_tag=SH03_08430 NZ_CP010441.1 Protein Homology CDS 1719142 1720425 . + 0 ID=cds1624;Parent=gene1684;Dbxref=Genbank:WP_000445231.1;Name=WP_000445231.1;gbkey=CDS;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_000445231.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1720594 1721358 . + . ID=gene1685;Name=SH03_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08440;old_locus_tag=SH03_08435 NZ_CP010441.1 Protein Homology CDS 1720594 1721358 . + 0 ID=cds1625;Parent=gene1685;Dbxref=Genbank:WP_001350496.1;Name=WP_001350496.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_001350496.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1721531 1722214 . + . ID=gene1686;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=SH03_RS08445;old_locus_tag=SH03_08440 NZ_CP010441.1 Protein Homology CDS 1721531 1722214 . + 0 ID=cds1626;Parent=gene1686;Dbxref=Genbank:WP_000125016.1;Name=WP_000125016.1;Note=Catalyzes the formation of (d)CDP from ATP and (d)CMP;gbkey=CDS;gene=cmk;product=cytidylate kinase;protein_id=WP_000125016.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1722325 1723998 . + . ID=gene1687;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=SH03_RS08450;old_locus_tag=SH03_08445 NZ_CP010441.1 Protein Homology CDS 1722325 1723998 . + 0 ID=cds1627;Parent=gene1687;Dbxref=Genbank:WP_000140327.1;Name=WP_000140327.1;Note=in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins;gbkey=CDS;gene=rpsA;product=30S ribosomal protein S1;protein_id=WP_000140327.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1724158 1724442 . + . ID=gene1688;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=SH03_RS08455;old_locus_tag=SH03_08450 NZ_CP010441.1 Protein Homology CDS 1724158 1724442 . + 0 ID=cds1628;Parent=gene1688;Dbxref=Genbank:WP_000167336.1;Name=WP_000167336.1;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;gbkey=CDS;gene=ihfB;product=integration host factor subunit beta;protein_id=WP_000167336.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1724650 1726914 . + . ID=gene1689;Name=SH03_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08460;old_locus_tag=SH03_08455 NZ_CP010441.1 Protein Homology CDS 1724650 1726914 . + 0 ID=cds1629;Parent=gene1689;Dbxref=Genbank:WP_000705764.1;Name=WP_000705764.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000705764.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1726951 1728699 . + . ID=gene1690;Name=SH03_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08465;old_locus_tag=SH03_08460 NZ_CP010441.1 Protein Homology CDS 1726951 1728699 . + 0 ID=cds1630;Parent=gene1690;Dbxref=Genbank:WP_000551270.1;Name=WP_000551270.1;Note=involved in the transport of lipid A across the inner membrane;gbkey=CDS;product=lipid A export ATP-binding/permease MsbA;protein_id=WP_000551270.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1728696 1729682 . + . ID=gene1691;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=SH03_RS08470;old_locus_tag=SH03_08465 NZ_CP010441.1 Protein Homology CDS 1728696 1729682 . + 0 ID=cds1631;Parent=gene1691;Dbxref=Genbank:WP_000570544.1;Name=WP_000570544.1;Note=transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1%2C4'-bis-phosphate;gbkey=CDS;gene=lpxK;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_000570544.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1729719 1730951 . + . ID=gene1692;Name=SH03_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08475;old_locus_tag=SH03_08470 NZ_CP010441.1 Protein Homology CDS 1729719 1730951 . + 0 ID=cds1632;Parent=gene1692;Dbxref=Genbank:WP_000056538.1;Name=WP_000056538.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000056538.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1731003 1731185 . + . ID=gene1693;Name=SH03_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08480;old_locus_tag=SH03_08475 NZ_CP010441.1 Protein Homology CDS 1731003 1731185 . + 0 ID=cds1633;Parent=gene1693;Dbxref=Genbank:WP_000350058.1;Name=WP_000350058.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000350058.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1731182 1731928 . + . ID=gene1694;Name=SH03_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08485;old_locus_tag=SH03_08480 NZ_CP010441.1 Protein Homology CDS 1731182 1731928 . + 0 ID=cds1634;Parent=gene1694;Dbxref=Genbank:WP_000011603.1;Name=WP_000011603.1;Note=CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS;gbkey=CDS;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_000011603.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1732082 1732975 . + . ID=gene1695;Name=SH03_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08490;old_locus_tag=SH03_08485 NZ_CP010441.1 Protein Homology CDS 1732082 1732975 . + 0 ID=cds1635;Parent=gene1695;Dbxref=Genbank:WP_000436922.1;Name=WP_000436922.1;gbkey=CDS;product=protein kinase-like domain protein;protein_id=WP_000436922.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1732952 1733731 . - . ID=gene1696;Name=SH03_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08495;old_locus_tag=SH03_08490 NZ_CP010441.1 Protein Homology CDS 1732952 1733731 . - 0 ID=cds1636;Parent=gene1696;Dbxref=Genbank:WP_000899600.1;Name=WP_000899600.1;gbkey=CDS;product=envelope biogenesis factor ElyC;protein_id=WP_000899600.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1733867 1734652 . + . ID=gene1697;Name=SH03_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08500;old_locus_tag=SH03_08495 NZ_CP010441.1 Protein Homology CDS 1733867 1734652 . + 0 ID=cds1637;Parent=gene1697;Dbxref=Genbank:WP_001298300.1;Name=WP_001298300.1;gbkey=CDS;product=protein SmtA;protein_id=WP_001298300.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1734649 1735971 . + . ID=gene1698;Name=SH03_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08505;old_locus_tag=SH03_08500 NZ_CP010441.1 Protein Homology CDS 1734649 1735971 . + 0 ID=cds1638;Parent=gene1698;Dbxref=Genbank:WP_001288850.1;Name=WP_001288850.1;Note=acts with MukB and MukE to condense the chromosome and allow for segregation during cell division;gbkey=CDS;product=chromosome partition protein MukF;protein_id=WP_001288850.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1735952 1736656 . + . ID=gene1699;Name=SH03_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08510;old_locus_tag=SH03_08505 NZ_CP010441.1 Protein Homology CDS 1735952 1736656 . + 0 ID=cds1639;Parent=gene1699;Dbxref=Genbank:WP_001295347.1;Name=WP_001295347.1;Note=acts with MukB and MukF to condense the chromosome and allow for segregation during cell division;gbkey=CDS;product=chromosome partition protein MukE;protein_id=WP_001295347.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1736656 1741116 . + . ID=gene1700;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=SH03_RS08515;old_locus_tag=SH03_08510 NZ_CP010441.1 Protein Homology CDS 1736656 1741116 . + 0 ID=cds1640;Parent=gene1700;Dbxref=Genbank:WP_000572698.1;Name=WP_000572698.1;Note=SMC (structural maintenance of chromosomes) family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects;gbkey=CDS;gene=mukB;product=chromosome partition protein MukB;protein_id=WP_000572698.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1741377 1743224 . + . ID=gene1701;Name=SH03_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08520;old_locus_tag=SH03_08515 NZ_CP010441.1 Protein Homology CDS 1741377 1743224 . + 0 ID=cds1641;Parent=gene1701;Dbxref=Genbank:WP_000925969.1;Name=WP_000925969.1;Note=catalyzes the formation of a meso-diaminopimelyl- meso-diaminopimelyl crosslink;gbkey=CDS;product=transpeptidase;protein_id=WP_000925969.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1743405 1743953 . + . ID=gene1702;Name=SH03_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08525;old_locus_tag=SH03_08520 NZ_CP010441.1 Protein Homology CDS 1743405 1743953 . + 0 ID=cds1642;Parent=gene1702;Dbxref=Genbank:WP_001295932.1;Name=WP_001295932.1;gbkey=CDS;product=M15A protease-related family periplasmic protein;protein_id=WP_001295932.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1743980 1744627 . + . ID=gene1703;Name=SH03_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08530;old_locus_tag=SH03_08525 NZ_CP010441.1 Protein Homology CDS 1743980 1744627 . + 0 ID=cds1643;Parent=gene1703;Dbxref=Genbank:WP_001109486.1;Name=WP_001109486.1;gbkey=CDS;product=metal-binding enzyme;protein_id=WP_001109486.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1744849 1746039 . - . ID=gene1704;Name=SH03_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08535;old_locus_tag=SH03_08530 NZ_CP010441.1 Protein Homology CDS 1744849 1746039 . - 0 ID=cds1644;Parent=gene1704;Dbxref=Genbank:WP_000462687.1;Name=WP_000462687.1;gbkey=CDS;product=aspartate aminotransferase;protein_id=WP_000462687.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1746038 1746208 . + . ID=gene1705;Name=SH03_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08540;old_locus_tag=SH03_08535 NZ_CP010441.1 Protein Homology CDS 1746038 1746208 . + 0 ID=cds1645;Parent=gene1705;Dbxref=Genbank:WP_000196604.1;Name=WP_000196604.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000196604.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1746224 1747312 . - . ID=gene1706;Name=SH03_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08545;old_locus_tag=SH03_08540 NZ_CP010441.1 Protein Homology CDS 1746224 1747312 . - 0 ID=cds1646;Parent=gene1706;Dbxref=Genbank:WP_000977920.1;Name=WP_000977920.1;gbkey=CDS;product=outer membrane protein F;protein_id=WP_000977920.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1747915 1749315 . - . ID=gene1707;Name=SH03_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08550;old_locus_tag=SH03_08545 NZ_CP010441.1 Protein Homology CDS 1747915 1749315 . - 0 ID=cds1647;Parent=gene1707;Dbxref=Genbank:WP_000117881.1;Name=WP_000117881.1;gbkey=CDS;product=asparagine--tRNA ligase;protein_id=WP_000117881.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1749484 1750686 . - . ID=gene1708;Name=SH03_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08555;old_locus_tag=SH03_08550 NZ_CP010441.1 Protein Homology CDS 1749484 1750686 . - 0 ID=cds1648;Parent=gene1708;Dbxref=Genbank:WP_001307697.1;Name=WP_001307697.1;Note=catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate;gbkey=CDS;product=nicotinate phosphoribosyltransferase;protein_id=WP_001307697.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1750952 1753564 . + . ID=gene1709;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=SH03_RS08560;old_locus_tag=SH03_08555 NZ_CP010441.1 Protein Homology CDS 1750952 1753564 . + 0 ID=cds1649;Parent=gene1709;Dbxref=Genbank:WP_000193841.1;Name=WP_000193841.1;gbkey=CDS;gene=pepN;product=aminopeptidase N;protein_id=WP_000193841.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1753607 1754374 . - . ID=gene1710;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=SH03_RS08565;old_locus_tag=SH03_08560 NZ_CP010441.1 Protein Homology CDS 1753607 1754374 . - 0 ID=cds1650;Parent=gene1710;Dbxref=Genbank:WP_001090506.1;Name=WP_001090506.1;Note=part of the ABC type transport system SsuABC for aliphatic sulfonates%3B with SsuA being the periplasmic substrate-binding subunit%2C SsuB the ATP-binding subunit and SsuC the permease;gbkey=CDS;gene=ssuB;product=aliphatic sulfonate ABC transporter ATP-binding protein;protein_id=WP_001090506.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1754371 1755162 . - . ID=gene1711;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=SH03_RS08570;old_locus_tag=SH03_08565 NZ_CP010441.1 Protein Homology CDS 1754371 1755162 . - 0 ID=cds1651;Parent=gene1711;Dbxref=Genbank:WP_000235203.1;Name=WP_000235203.1;Note=part of the ABC type transport system for alkanesulfonate SsuABC%3B SsuB the ATP-binding subunit and SsuC the permease;gbkey=CDS;gene=ssuC;product=aliphatic sulfonate ABC transporter permease;protein_id=WP_000235203.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1755173 1756318 . - . ID=gene1712;Name=SH03_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08575;old_locus_tag=SH03_08570 NZ_CP010441.1 Protein Homology CDS 1755173 1756318 . - 0 ID=cds1652;Parent=gene1712;Dbxref=Genbank:WP_000056006.1;Name=WP_000056006.1;Note=catalyzes the release of sulfite from alkanesulfonates;gbkey=CDS;product=alkanesulfonate monooxygenase;protein_id=WP_000056006.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1756315 1757274 . - . ID=gene1713;Name=SH03_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08580;old_locus_tag=SH03_08575 NZ_CP010441.1 Protein Homology CDS 1756315 1757274 . - 0 ID=cds1653;Parent=gene1713;Dbxref=Genbank:WP_001244308.1;Name=WP_001244308.1;Note=part of the ABC type transport system SsuABC for aliphatic sulfonates%3B with SsuA being the periplasmic subunit SsuB the ATP-binding subunit and SsuC the permease;gbkey=CDS;product=aliphatic sulfonate ABC transporter substrate-binding protein;protein_id=WP_001244308.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1757267 1757842 . - . ID=gene1714;Name=SH03_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08585;old_locus_tag=SH03_08580 NZ_CP010441.1 Protein Homology CDS 1757267 1757842 . - 0 ID=cds1654;Parent=gene1714;Dbxref=Genbank:WP_001263933.1;Name=WP_001263933.1;gbkey=CDS;product=FMN reductase;protein_id=WP_001263933.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1758198 1758737 . + . ID=gene1715;Name=SH03_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08590;old_locus_tag=SH03_08585 NZ_CP010441.1 Protein Homology CDS 1758198 1758737 . + 0 ID=cds1655;Parent=gene1715;Dbxref=Genbank:WP_000750293.1;Name=WP_000750293.1;gbkey=CDS;product=fimbrial subunit ElfA;protein_id=WP_000750293.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1758847 1759521 . + . ID=gene1716;Name=SH03_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08595;old_locus_tag=SH03_08590 NZ_CP010441.1 Protein Homology CDS 1758847 1759521 . + 0 ID=cds1656;Parent=gene1716;Dbxref=Genbank:WP_000218743.1;Name=WP_000218743.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_000218743.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1759546 1762146 . + . ID=gene1717;Name=SH03_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08600;old_locus_tag=SH03_08595 NZ_CP010441.1 Protein Homology CDS 1759546 1762146 . + 0 ID=cds1657;Parent=gene1717;Dbxref=Genbank:WP_000286312.1;Name=WP_000286312.1;Note=involved in fimbria production;gbkey=CDS;product=usher protein ElfC;protein_id=WP_000286312.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1762137 1763207 . + . ID=gene1718;Name=SH03_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08605;old_locus_tag=SH03_08600 NZ_CP010441.1 Protein Homology CDS 1762137 1763207 . + 0 ID=cds1658;Parent=gene1718;Dbxref=Genbank:WP_001165668.1;Name=WP_001165668.1;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=WP_001165668.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1763309 1763761 . + . ID=gene1719;Name=SH03_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08610;old_locus_tag=SH03_08605 NZ_CP010441.1 Protein Homology CDS 1763309 1763761 . + 0 ID=cds1659;Parent=gene1719;Dbxref=Genbank:WP_000548456.1;Name=WP_000548456.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_000548456.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1763769 1764284 . + . ID=gene1720;Name=SH03_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08615;old_locus_tag=SH03_08610 NZ_CP010441.1 Protein Homology CDS 1763769 1764284 . + 0 ID=cds1660;Parent=gene1720;Dbxref=Genbank:WP_000919497.1;Name=WP_000919497.1;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=WP_000919497.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1764277 1764987 . + . ID=gene1721;Name=SH03_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08620;old_locus_tag=SH03_08615 NZ_CP010441.1 Protein Homology CDS 1764277 1764987 . + 0 ID=cds1661;Parent=gene1721;Dbxref=Genbank:WP_001307699.1;Name=WP_001307699.1;gbkey=CDS;product=periplasmic pilin chaperone;protein_id=WP_001307699.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1765098 1766108 . + . ID=gene1722;Name=SH03_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08625;old_locus_tag=SH03_08620 NZ_CP010441.1 Protein Homology CDS 1765098 1766108 . + 0 ID=cds1662;Parent=gene1722;Dbxref=Genbank:WP_001295352.1;Name=WP_001295352.1;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors;gbkey=CDS;product=dihydroorotate dehydrogenase;protein_id=WP_001295352.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1766282 1766824 . + . ID=gene1723;Name=SH03_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08630;old_locus_tag=SH03_08625 NZ_CP010441.1 Protein Homology CDS 1766282 1766824 . + 0 ID=cds1663;Parent=gene1723;Dbxref=Genbank:WP_001295353.1;Name=WP_001295353.1;gbkey=CDS;product=cell division protein ZapC;protein_id=WP_001295353.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1766821 1767930 . - . ID=gene1724;Name=SH03_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08635;old_locus_tag=SH03_08630 NZ_CP010441.1 Protein Homology CDS 1766821 1767930 . - 0 ID=cds1664;Parent=gene1724;Dbxref=Genbank:WP_000212426.1;Name=WP_000212426.1;gbkey=CDS;product=6-N-hydroxylaminopurine detoxification oxidoreductase;protein_id=WP_000212426.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1768174 1770282 . + . ID=gene1725;Name=rlmL;gbkey=Gene;gene=rlmL;gene_biotype=protein_coding;locus_tag=SH03_RS08640;old_locus_tag=SH03_08635 NZ_CP010441.1 Protein Homology CDS 1768174 1770282 . + 0 ID=cds1665;Parent=gene1725;Dbxref=Genbank:WP_001086539.1;Name=WP_001086539.1;Note=catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA;gbkey=CDS;gene=rlmL;product=ribosomal RNA large subunit methyltransferase K/L;protein_id=WP_001086539.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1770294 1772201 . + . ID=gene1726;Name=SH03_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08645;old_locus_tag=SH03_08640 NZ_CP010441.1 Protein Homology CDS 1770294 1772201 . + 0 ID=cds1666;Parent=gene1726;Dbxref=Genbank:WP_000053099.1;Name=WP_000053099.1;Note=Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_000053099.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1772331 1773584 . + . ID=gene1727;Name=SH03_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08650;old_locus_tag=SH03_08645 NZ_CP010441.1 Protein Homology CDS 1772331 1773584 . + 0 ID=cds1667;Parent=gene1727;Dbxref=Genbank:WP_000333176.1;Name=WP_000333176.1;gbkey=CDS;product=paraquat-inducible protein A;protein_id=WP_000333176.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1773589 1775229 . + . ID=gene1728;Name=SH03_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08655;old_locus_tag=SH03_08650 NZ_CP010441.1 Protein Homology CDS 1773589 1775229 . + 0 ID=cds1668;Parent=gene1728;Dbxref=Genbank:WP_000445533.1;Name=WP_000445533.1;gbkey=CDS;product=paraquat-inducible protein B;protein_id=WP_000445533.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1775226 1775789 . + . ID=gene1729;Name=SH03_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08660;old_locus_tag=SH03_08655 NZ_CP010441.1 Protein Homology CDS 1775226 1775789 . + 0 ID=cds1669;Parent=gene1729;Dbxref=Genbank:WP_000759120.1;Name=WP_000759120.1;gbkey=CDS;product=DUF330 domain-containing protein;protein_id=WP_000759120.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1776045 1776212 . + . ID=gene1730;Name=SH03_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08665;old_locus_tag=SH03_08660 NZ_CP010441.1 Protein Homology CDS 1776045 1776212 . + 0 ID=cds1670;Parent=gene1730;Dbxref=Genbank:WP_000828648.1;Name=WP_000828648.1;gbkey=CDS;product=ribosome modulation factor;protein_id=WP_000828648.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1776282 1776800 . - . ID=gene1731;Name=SH03_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08670;old_locus_tag=SH03_08665 NZ_CP010441.1 Protein Homology CDS 1776282 1776800 . - 0 ID=cds1671;Parent=gene1731;Dbxref=Genbank:WP_000227927.1;Name=WP_000227927.1;Note=catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP;gbkey=CDS;product=3-hydroxydecanoyl-ACP dehydratase;protein_id=WP_000227927.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1776869 1778629 . - . ID=gene1732;Name=SH03_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08675;old_locus_tag=SH03_08670 NZ_CP010441.1 Protein Homology CDS 1776869 1778629 . - 0 ID=cds1672;Parent=gene1732;Dbxref=Genbank:WP_000156518.1;Name=WP_000156518.1;gbkey=CDS;product=peptidase;protein_id=WP_000156518.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1778815 1779267 . + . ID=gene1733;Name=SH03_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08680;old_locus_tag=SH03_08675 NZ_CP010441.1 Protein Homology CDS 1778815 1779267 . + 0 ID=cds1673;Parent=gene1733;Dbxref=Genbank:WP_000877161.1;Name=WP_000877161.1;gbkey=CDS;product=macrodomain Ter protein;protein_id=WP_000877161.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1779343 1780383 . - . ID=gene1734;Name=SH03_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08685;old_locus_tag=SH03_08680 NZ_CP010441.1 Protein Homology CDS 1779343 1780383 . - 0 ID=cds1674;Parent=gene1734;Dbxref=Genbank:WP_000750416.1;Name=WP_000750416.1;Note=OmpA is believed to be a porin%2C involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli%2C and it is known to play a role as a phage receptor%2C a mediator of F-factor dependent conjugation%2C and in maintaining the structural shape of the outer membrane%3B 3a%3B II*%3B G%3B d;gbkey=CDS;product=outer membrane protein A;protein_id=WP_000750416.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1780586 1780756 . + . ID=gene1735;Name=SH03_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08690;old_locus_tag=SH03_08685 NZ_CP010441.1 Protein Homology CDS 1780586 1780756 . + 0 ID=cds1675;Parent=gene1735;Dbxref=Genbank:WP_032083270.1;Name=WP_032083270.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032083270.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1780740 1781249 . - . ID=gene1736;Name=SH03_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08695;old_locus_tag=SH03_08690 NZ_CP010441.1 Protein Homology CDS 1780740 1781249 . - 0 ID=cds1676;Parent=gene1736;Dbxref=Genbank:WP_000288710.1;Name=WP_000288710.1;gbkey=CDS;product=cell division inhibitor SulA;protein_id=WP_000288710.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1781468 1782097 . + . ID=gene1737;Name=SH03_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08700;old_locus_tag=SH03_08695 NZ_CP010441.1 Protein Homology CDS 1781468 1782097 . + 0 ID=cds1677;Parent=gene1737;Dbxref=Genbank:WP_000839153.1;Name=WP_000839153.1;gbkey=CDS;product=protein Sxy;protein_id=WP_000839153.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1782060 1784213 . - . ID=gene1738;Name=SH03_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08705;old_locus_tag=SH03_08700 NZ_CP010441.1 Protein Homology CDS 1782060 1784213 . - 0 ID=cds1678;Parent=gene1738;Dbxref=Genbank:WP_001382153.1;Name=WP_001382153.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001382153.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1784232 1784678 . - . ID=gene1739;Name=SH03_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08710;old_locus_tag=SH03_08705 NZ_CP010441.1 Protein Homology CDS 1784232 1784678 . - 0 ID=cds1679;Parent=gene1739;Dbxref=Genbank:WP_001261235.1;Name=WP_001261235.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001261235.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1784801 1786855 . + . ID=gene1740;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=SH03_RS08715;old_locus_tag=SH03_08710 NZ_CP010441.1 Protein Homology CDS 1784801 1786855 . + 0 ID=cds1680;Parent=gene1740;Dbxref=Genbank:WP_001295354.1;Name=WP_001295354.1;Note=catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand;gbkey=CDS;gene=helD;product=helicase IV;protein_id=WP_001295354.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1786887 1787345 . - . ID=gene1741;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=SH03_RS08720;old_locus_tag=SH03_08715 NZ_CP010441.1 Protein Homology CDS 1786887 1787345 . - 0 ID=cds1681;Parent=gene1741;Dbxref=Genbank:WP_000424181.1;Name=WP_000424181.1;Note=catalyzes the formation of methylglyoxal from glycerone phosphate;gbkey=CDS;gene=mgsA;product=methylglyoxal synthase;protein_id=WP_000424181.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1787441 1788103 . - . ID=gene1742;Name=SH03_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08725;old_locus_tag=SH03_08720 NZ_CP010441.1 Protein Homology CDS 1787441 1788103 . - 0 ID=cds1682;Parent=gene1742;Dbxref=Genbank:WP_000847791.1;Name=WP_000847791.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000847791.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1788143 1788313 . - . ID=gene1743;Name=SH03_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08730;old_locus_tag=SH03_08725 NZ_CP010441.1 Protein Homology CDS 1788143 1788313 . - 0 ID=cds1683;Parent=gene1743;Dbxref=Genbank:WP_001301416.1;Name=WP_001301416.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001301416.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1788276 1788689 . + . ID=gene1744;Name=SH03_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08735;old_locus_tag=SH03_08730 NZ_CP010441.1 Protein Homology CDS 1788276 1788689 . + 0 ID=cds1684;Parent=gene1744;Dbxref=Genbank:WP_001301418.1;Name=WP_001301418.1;gbkey=CDS;product=CoA-binding protein;protein_id=WP_001301418.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1788734 1789051 . - . ID=gene1745;Name=SH03_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08740;old_locus_tag=SH03_08735 NZ_CP010441.1 Protein Homology CDS 1788734 1789051 . - 0 ID=cds1685;Parent=gene1745;Dbxref=Genbank:WP_001295356.1;Name=WP_001295356.1;gbkey=CDS;product=heat-shock protein HspQ;protein_id=WP_001295356.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1789109 1790299 . - . ID=gene1746;Name=SH03_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08745;old_locus_tag=SH03_08740 NZ_CP010441.1 Protein Homology CDS 1789109 1790299 . - 0 ID=cds1686;Parent=gene1746;Dbxref=Genbank:WP_000116297.1;Name=WP_000116297.1;Note=SAM-dependent%3Bcatalyzes the methylation of cytosine at position 1962 of the 23S rRNA;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase I;protein_id=WP_000116297.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1790394 1790672 . + . ID=gene1747;Name=SH03_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08750;old_locus_tag=SH03_08745 NZ_CP010441.1 Protein Homology CDS 1790394 1790672 . + 0 ID=cds1687;Parent=gene1747;Dbxref=Genbank:WP_000048252.1;Name=WP_000048252.1;Note=catalyzes the hydrolysis of acylphosphate;gbkey=CDS;product=acylphosphatase;protein_id=WP_000048252.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1790669 1790998 . - . ID=gene1748;Name=SH03_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08755;old_locus_tag=SH03_08750 NZ_CP010441.1 Protein Homology CDS 1790669 1790998 . - 0 ID=cds1688;Parent=gene1748;Dbxref=Genbank:WP_000904442.1;Name=WP_000904442.1;Note=transfers sulfur from TusBCD complex to MnmA%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;product=sulfurtransferase TusE;protein_id=WP_000904442.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1791089 1791748 . - . ID=gene1749;Name=SH03_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08760;old_locus_tag=SH03_08755 NZ_CP010441.1 Protein Homology CDS 1791089 1791748 . - 0 ID=cds1689;Parent=gene1749;Dbxref=Genbank:WP_000375136.1;Name=WP_000375136.1;Note=binds to the HflBKC complex which modulates FtsH activity;gbkey=CDS;product=Modulator of FtsH protease inner membrane protein;protein_id=WP_000375136.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1791955 1792042 . - . ID=gene1750;Name=SH03_RS08765;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS08765;old_locus_tag=SH03_08760 NZ_CP010441.1 tRNAscan-SE tRNA 1791955 1792042 . - . ID=rna60;Parent=gene1750;anticodon=(pos:complement(1792006..1792008));gbkey=tRNA;product=tRNA-Ser NZ_CP010441.1 tRNAscan-SE exon 1791955 1792042 . - . ID=id120;Parent=rna60;anticodon=(pos:complement(1792006..1792008));gbkey=tRNA;product=tRNA-Ser NZ_CP010441.1 RefSeq gene 1792469 1793587 . + . ID=gene1751;Name=SH03_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08770;old_locus_tag=SH03_08765 NZ_CP010441.1 Protein Homology CDS 1792469 1793587 . + 0 ID=cds1690;Parent=gene1751;Dbxref=Genbank:WP_001058323.1;Name=WP_001058323.1;gbkey=CDS;product=hydrogenase-1 small chain;protein_id=WP_001058323.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1793584 1795377 . + . ID=gene1752;Name=SH03_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08775;old_locus_tag=SH03_08770 NZ_CP010441.1 Protein Homology CDS 1793584 1795377 . + 0 ID=cds1691;Parent=gene1752;Dbxref=Genbank:WP_000107384.1;Name=WP_000107384.1;gbkey=CDS;product=hydrogenase-1 large chain;protein_id=WP_000107384.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1795396 1796103 . + . ID=gene1753;Name=SH03_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08780;old_locus_tag=SH03_08775 NZ_CP010441.1 Protein Homology CDS 1795396 1796103 . + 0 ID=cds1692;Parent=gene1753;Dbxref=Genbank:WP_001186424.1;Name=WP_001186424.1;gbkey=CDS;product=Ni/Fe-hydrogenase B-type cytochrome subunit;protein_id=WP_001186424.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1796100 1796687 . + . ID=gene1754;Name=SH03_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08785;old_locus_tag=SH03_08780 NZ_CP010441.1 Protein Homology CDS 1796100 1796687 . + 0 ID=cds1693;Parent=gene1754;Dbxref=Genbank:WP_000003671.1;Name=WP_000003671.1;Note=HyaD%3B endopeptidase involved in the cleavage of the C-terminus end of HyaB (the large subunit of hydrogenase 1);gbkey=CDS;product=hydrogenase 1 maturation protease;protein_id=WP_000003671.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1796684 1797082 . + . ID=gene1755;Name=SH03_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08790;old_locus_tag=SH03_08785 NZ_CP010441.1 Protein Homology CDS 1796684 1797082 . + 0 ID=cds1694;Parent=gene1755;Dbxref=Genbank:WP_000063978.1;Name=WP_000063978.1;Note=involved in processing hydrogenase proteins HyaA and HyaB;gbkey=CDS;product=hydrogenase-1 operon protein HyaE;protein_id=WP_000063978.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1797079 1797936 . + . ID=gene1756;Name=SH03_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08795;old_locus_tag=SH03_08790 NZ_CP010441.1 Protein Homology CDS 1797079 1797936 . + 0 ID=cds1695;Parent=gene1756;Dbxref=Genbank:WP_000004899.1;Name=WP_000004899.1;gbkey=CDS;product=hydrogenase-1 operon protein HyaF;protein_id=WP_000004899.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1798070 1799614 . + . ID=gene1757;Name=SH03_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08800;old_locus_tag=SH03_08795 NZ_CP010441.1 Protein Homology CDS 1798070 1799614 . + 0 ID=cds1696;Parent=gene1757;Dbxref=Genbank:WP_000263582.1;Name=WP_000263582.1;Note=part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone;gbkey=CDS;product=cytochrome bd-II ubiquinol oxidase subunit 1;protein_id=WP_000263582.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1799626 1800762 . + . ID=gene1758;Name=SH03_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08805;old_locus_tag=SH03_08800 NZ_CP010441.1 Protein Homology CDS 1799626 1800762 . + 0 ID=cds1697;Parent=gene1758;Dbxref=Genbank:WP_000460803.1;Name=WP_000460803.1;gbkey=CDS;product=cytochrome bd-II ubiquinol oxidase subunit 2;protein_id=WP_000460803.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1800775 1800867 . + . ID=gene1759;Name=SH03_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08810;old_locus_tag=SH03_08805 NZ_CP010441.1 Protein Homology CDS 1800775 1800867 . + 0 ID=cds1698;Parent=gene1759;Dbxref=Genbank:WP_000270305.1;Name=WP_000270305.1;gbkey=CDS;product=cytochrome bd-II oxidase subunit;protein_id=WP_000270305.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1800947 1802245 . + . ID=gene1760;Name=SH03_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08815;old_locus_tag=SH03_08810 NZ_CP010441.1 Protein Homology CDS 1800947 1802245 . + 0 ID=cds1699;Parent=gene1760;Dbxref=Genbank:WP_001300464.1;Name=WP_001300464.1;gbkey=CDS;product=periplasmic AppA protein;protein_id=WP_001300464.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1802360 1804540 . - . ID=gene1761;Name=SH03_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08820;old_locus_tag=SH03_08815 NZ_CP010441.1 Protein Homology CDS 1802360 1804540 . - 0 ID=cds1700;Parent=gene1761;Dbxref=Genbank:WP_000208650.1;Name=WP_000208650.1;gbkey=CDS;product=tyrosine-protein kinase etk;protein_id=WP_000208650.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1804560 1805006 . - . ID=gene1762;Name=SH03_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08825;old_locus_tag=SH03_08820 NZ_CP010441.1 Protein Homology CDS 1804560 1805006 . - 0 ID=cds1701;Parent=gene1762;Dbxref=Genbank:WP_000057871.1;Name=WP_000057871.1;Note=Wzb shows phosphatase activity towards the autophosphorylated Wzc protein%2C which induces colanic acid biosynthesis%3B catalyzes the phosphorylation of UDP-glucose dehydrogenase%2C an enzyme involved in colanic acid biosynthesis;gbkey=CDS;product=protein-tyrosine phosphatase;protein_id=WP_000057871.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1804994 1806133 . - . ID=gene1763;Name=SH03_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08830;old_locus_tag=SH03_08825 NZ_CP010441.1 Protein Homology CDS 1804994 1806133 . - 0 ID=cds1702;Parent=gene1763;Dbxref=Genbank:WP_001295357.1;Name=WP_001295357.1;Note=required for the translocation of capsular polysaccharide through the outer membrane;gbkey=CDS;product=O-antigen capsule outer membrane auxillary protein export channel;protein_id=WP_001295357.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1806179 1808275 . - . ID=gene1764;Name=SH03_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08835;old_locus_tag=SH03_08830 NZ_CP010441.1 Protein Homology CDS 1806179 1808275 . - 0 ID=cds1703;Parent=gene1764;Dbxref=Genbank:WP_000742328.1;Name=WP_000742328.1;gbkey=CDS;product=O-antigen capsule production periplasmic protein;protein_id=WP_000742328.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1808275 1809021 . - . ID=gene1765;Name=SH03_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08840;old_locus_tag=SH03_08835 NZ_CP010441.1 Protein Homology CDS 1808275 1809021 . - 0 ID=cds1704;Parent=gene1765;Dbxref=Genbank:WP_001038079.1;Name=WP_001038079.1;gbkey=CDS;product=O-antigen capsule production periplasmic protein;protein_id=WP_001038079.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1809018 1809662 . - . ID=gene1766;Name=SH03_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08845;old_locus_tag=SH03_08840 NZ_CP010441.1 Protein Homology CDS 1809018 1809662 . - 0 ID=cds1705;Parent=gene1766;Dbxref=Genbank:WP_001247610.1;Name=WP_001247610.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001247610.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1809769 1810074 . - . ID=gene1767;Name=SH03_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08850;old_locus_tag=SH03_08845 NZ_CP010441.1 Protein Homology CDS 1809769 1810074 . - 0 ID=cds1706;Parent=gene1767;Dbxref=Genbank:WP_001295358.1;Name=WP_001295358.1;gbkey=CDS;product=threonine-rich inner membrane protein GfcA;protein_id=WP_001295358.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1810108 1810879 . + . ID=id121;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1810196 1810411 . - . ID=gene1768;Name=SH03_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08855;old_locus_tag=SH03_08850 NZ_CP010441.1 Protein Homology CDS 1810196 1810411 . - 0 ID=cds1707;Parent=gene1768;Dbxref=Genbank:WP_001360189.1;Name=WP_001360189.1;gbkey=CDS;product=transposase;protein_id=WP_001360189.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1810357 1810860 . + . ID=gene1769;Name=SH03_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08860;old_locus_tag=SH03_08855 NZ_CP010441.1 Protein Homology CDS 1810357 1810860 . + 0 ID=cds1708;Parent=gene1769;Dbxref=Genbank:WP_001119339.1;Name=WP_001119339.1;gbkey=CDS;product=Insertion element IS1 4 protein InsB;protein_id=WP_001119339.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1811293 1811505 . - . ID=gene1770;Name=SH03_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08865;old_locus_tag=SH03_08860 NZ_CP010441.1 Protein Homology CDS 1811293 1811505 . - 0 ID=cds1709;Parent=gene1770;Dbxref=Genbank:WP_000087763.1;Name=WP_000087763.1;gbkey=CDS;product=cold-shock protein CspH;protein_id=WP_000087763.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1811791 1812003 . + . ID=gene1771;Name=SH03_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08870;old_locus_tag=SH03_08865 NZ_CP010441.1 Protein Homology CDS 1811791 1812003 . + 0 ID=cds1710;Parent=gene1771;Dbxref=Genbank:WP_000066490.1;Name=WP_000066490.1;gbkey=CDS;product=cold-shock protein CspG;protein_id=WP_000066490.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1812177 1812407 . + . ID=gene1772;Name=SH03_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08875;old_locus_tag=SH03_08870 NZ_CP010441.1 Protein Homology CDS 1812177 1812407 . + 0 ID=cds1711;Parent=gene1772;Dbxref=Genbank:WP_001309400.1;Name=WP_001309400.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_001309400.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1812397 1812570 . + . ID=gene1773;Name=SH03_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08880;old_locus_tag=SH03_08875 NZ_CP010441.1 Protein Homology CDS 1812397 1812570 . + 0 ID=cds1712;Parent=gene1773;Dbxref=Genbank:WP_001019197.1;Name=WP_001019197.1;gbkey=CDS;product=protein GnsA;protein_id=WP_001019197.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1812619 1813692 . - . ID=gene1774;Name=SH03_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08885;old_locus_tag=SH03_08880 NZ_CP010441.1 Protein Homology CDS 1812619 1813692 . - 0 ID=cds1713;Parent=gene1774;Dbxref=Genbank:WP_000829662.1;Name=WP_000829662.1;gbkey=CDS;product=4Fe-4S membrane protein;protein_id=WP_000829662.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1813764 1816478 . - . ID=gene1775;Name=SH03_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08890;old_locus_tag=SH03_08885 NZ_CP010441.1 Protein Homology CDS 1813764 1816478 . - 0 ID=cds1714;Parent=gene1775;Dbxref=Genbank:WP_000505119.1;Name=WP_000505119.1;Note=Member of the two-component regulatory system torS/torR involved in the anaerobic utilization of trimethylamine-N-oxide;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_000505119.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1816591 1817619 . + . ID=gene1776;Name=SH03_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08895;old_locus_tag=SH03_08890 NZ_CP010441.1 Protein Homology CDS 1816591 1817619 . + 0 ID=cds1715;Parent=gene1776;Dbxref=Genbank:WP_001264933.1;Name=WP_001264933.1;Note=periplasmic sensory protein associated with the TorRS two-component regulatory system;gbkey=CDS;product=periplasmic protein TorT;protein_id=WP_001264933.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1817592 1818284 . - . ID=gene1777;Name=SH03_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08900;old_locus_tag=SH03_08895 NZ_CP010441.1 Protein Homology CDS 1817592 1818284 . - 0 ID=cds1716;Parent=gene1777;Dbxref=Genbank:WP_001120125.1;Name=WP_001120125.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_001120125.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1818414 1819586 . + . ID=gene1778;Name=SH03_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08905;old_locus_tag=SH03_08900 NZ_CP010441.1 Protein Homology CDS 1818414 1819586 . + 0 ID=cds1717;Parent=gene1778;Dbxref=Genbank:WP_001230242.1;Name=WP_001230242.1;Note=with TorA forms the inducible trimethylamine N-oxide reductase which transfers electrons from menaquinones first to TorC then to TorA;gbkey=CDS;product=cytochrome c-type protein TorC;protein_id=WP_001230242.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1819586 1822132 . + . ID=gene1779;Name=SH03_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08910;old_locus_tag=SH03_08905 NZ_CP010441.1 Protein Homology CDS 1819586 1822132 . + 0 ID=cds1718;Parent=gene1779;Dbxref=Genbank:WP_001062091.1;Name=WP_001062091.1;Note=catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine;gbkey=CDS;product=trimethylamine-N-oxide reductase 1;protein_id=WP_001062091.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1822129 1822728 . + . ID=gene1780;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=SH03_RS08915;old_locus_tag=SH03_08910 NZ_CP010441.1 Protein Homology CDS 1822129 1822728 . + 0 ID=cds1719;Parent=gene1780;Dbxref=Genbank:WP_000209861.1;Name=WP_000209861.1;Note=TorD%3B involved in the biogenesis of torA%3B acts on torA before the insertion of the molybdenum cofactor and%2C as a result%2C probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor;gbkey=CDS;gene=torD;product=chaperone protein TorD;protein_id=WP_000209861.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1822880 1823185 . - . ID=gene1781;Name=SH03_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08920;old_locus_tag=SH03_08915 NZ_CP010441.1 Protein Homology CDS 1822880 1823185 . - 0 ID=cds1720;Parent=gene1781;Dbxref=Genbank:WP_000024560.1;Name=WP_000024560.1;Note=with CpbA modulates the activity of the dnaK chaperone system%3B interacts with CbpA and inhibits both the DnaJ-like co-chaperone activity and the DNA binding activity of CbpA;gbkey=CDS;product=chaperone modulatory protein CbpM;protein_id=WP_000024560.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1823185 1824105 . - . ID=gene1782;Name=SH03_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08925;old_locus_tag=SH03_08920 NZ_CP010441.1 Protein Homology CDS 1823185 1824105 . - 0 ID=cds1721;Parent=gene1782;Dbxref=Genbank:WP_000420621.1;Name=WP_000420621.1;Note=functional analog of DnaJ%3B co-chaperone with DnaK%2C molecular chaperone in an adaptive response to environmental stresses other than heat shock;gbkey=CDS;product=curved DNA-binding protein;protein_id=WP_000420621.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1824366 1825622 . + . ID=gene1783;Name=SH03_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08930;old_locus_tag=SH03_08925 NZ_CP010441.1 Protein Homology CDS 1824366 1825622 . + 0 ID=cds1722;Parent=gene1783;Dbxref=Genbank:WP_000535346.1;Name=WP_000535346.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000535346.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1825915 1827156 . + . ID=gene1784;Name=SH03_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08935;old_locus_tag=SH03_08930 NZ_CP010441.1 Protein Homology CDS 1825915 1827156 . + 0 ID=cds1723;Parent=gene1784;Dbxref=Genbank:WP_001044279.1;Name=WP_001044279.1;gbkey=CDS;product=glucose-1-phosphatase;protein_id=WP_001044279.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1827194 1827421 . - . ID=gene1785;Name=SH03_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08940;old_locus_tag=SH03_08935 NZ_CP010441.1 Protein Homology CDS 1827194 1827421 . - 0 ID=cds1724;Parent=gene1785;Dbxref=Genbank:WP_001143120.1;Name=WP_001143120.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001143120.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1827442 1828038 . - . ID=gene1786;Name=SH03_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08945;old_locus_tag=SH03_08940 NZ_CP010441.1 Protein Homology CDS 1827442 1828038 . - 0 ID=cds1725;Parent=gene1786;Dbxref=Genbank:WP_001151437.1;Name=WP_001151437.1;Note=catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;product=NAD(P)H dehydrogenase (quinone);protein_id=WP_001151437.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1828242 1828478 . + . ID=gene1787;Name=SH03_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08950;old_locus_tag=SH03_08945 NZ_CP010441.1 Protein Homology CDS 1828242 1828478 . + 0 ID=cds1726;Parent=gene1787;Dbxref=Genbank:WP_012601452.1;Name=WP_012601452.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012601452.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1828411 1828584 . + . ID=gene1788;Name=SH03_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08955;old_locus_tag=SH03_08950 NZ_CP010441.1 Protein Homology CDS 1828411 1828584 . + 0 ID=cds1727;Parent=gene1788;Dbxref=Genbank:WP_001273658.1;Name=WP_001273658.1;gbkey=CDS;product=KGG family protein;protein_id=WP_001273658.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1828841 1830169 . - . ID=gene1789;Name=SH03_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08960;old_locus_tag=SH03_08955 NZ_CP010441.1 Protein Homology CDS 1828841 1830169 . - 0 ID=cds1728;Parent=gene1789;Dbxref=Genbank:WP_001326838.1;Name=WP_001326838.1;gbkey=CDS;product=transporter;protein_id=WP_001326838.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1830190 1830684 . - . ID=gene1790;Name=SH03_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08965;old_locus_tag=SH03_08960 NZ_CP010441.1 Protein Homology CDS 1830190 1830684 . - 0 ID=cds1729;Parent=gene1790;Dbxref=Genbank:WP_001028083.1;Name=WP_001028083.1;gbkey=CDS;product=FMN reductase;protein_id=WP_001028083.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1830695 1831285 . - . ID=gene1791;Name=SH03_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08970;old_locus_tag=SH03_08965 NZ_CP010441.1 Protein Homology CDS 1830695 1831285 . - 0 ID=cds1730;Parent=gene1791;Dbxref=Genbank:WP_001001176.1;Name=WP_001001176.1;gbkey=CDS;product=malonic semialdehyde reductase RutE;protein_id=WP_001001176.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1831295 1832095 . - . ID=gene1792;Name=SH03_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08975;old_locus_tag=SH03_08970 NZ_CP010441.1 Protein Homology CDS 1831295 1832095 . - 0 ID=cds1731;Parent=gene1792;Dbxref=Genbank:WP_000777653.1;Name=WP_000777653.1;gbkey=CDS;product=reactive intermediate detoxifying aminoacrylate hydrolase;protein_id=WP_000777653.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1832103 1832489 . - . ID=gene1793;Name=SH03_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08980;old_locus_tag=SH03_08975 NZ_CP010441.1 Protein Homology CDS 1832103 1832489 . - 0 ID=cds1732;Parent=gene1793;Dbxref=Genbank:WP_001126780.1;Name=WP_001126780.1;gbkey=CDS;product=aminoacrylate deaminase reactive intermediate detoxification%3B weak enamine/imine deaminase activity;protein_id=WP_001126780.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1832501 1833193 . - . ID=gene1794;Name=SH03_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08985;old_locus_tag=SH03_08980 NZ_CP010441.1 Protein Homology CDS 1832501 1833193 . - 0 ID=cds1733;Parent=gene1794;Dbxref=Genbank:WP_001393558.1;Name=WP_001393558.1;gbkey=CDS;product=peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB;protein_id=WP_001393558.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1833193 1834284 . - . ID=gene1795;Name=SH03_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08990;old_locus_tag=SH03_08985 NZ_CP010441.1 Protein Homology CDS 1833193 1834284 . - 0 ID=cds1734;Parent=gene1795;Dbxref=Genbank:WP_001340618.1;Name=WP_001340618.1;gbkey=CDS;product=pyrimidine monooxygenase RutA;protein_id=WP_001340618.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1834572 1835210 . + . ID=gene1796;Name=SH03_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS08995;old_locus_tag=SH03_08990 NZ_CP010441.1 Protein Homology CDS 1834572 1835210 . + 0 ID=cds1735;Parent=gene1796;Dbxref=Genbank:WP_000191701.1;Name=WP_000191701.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000191701.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1835250 1839212 . - . ID=gene1797;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=SH03_RS09000;old_locus_tag=SH03_08995 NZ_CP010441.1 Protein Homology CDS 1835250 1839212 . - 0 ID=cds1736;Parent=gene1797;Dbxref=Genbank:WP_001326840.1;Name=WP_001326840.1;Note=proline utilization protein A%3B multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate%3B in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus%3B forms dimers and is a peripherally membrane-associated protein;gbkey=CDS;gene=putA;product=bifunctional protein PutA;protein_id=WP_001326840.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1839267 1839476 . + . ID=gene1798;Name=SH03_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09005;old_locus_tag=SH03_09000 NZ_CP010441.1 Protein Homology CDS 1839267 1839476 . + 0 ID=cds1737;Parent=gene1798;Dbxref=Genbank:WP_000979516.1;Name=WP_000979516.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000979516.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1839635 1841143 . + . ID=gene1799;Name=SH03_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09010;old_locus_tag=SH03_09005 NZ_CP010441.1 Protein Homology CDS 1839635 1841143 . + 0 ID=cds1738;Parent=gene1799;Dbxref=Genbank:WP_001018479.1;Name=WP_001018479.1;Note=involved in the sodium dependent uptake of proline;gbkey=CDS;product=sodium/proline symporter;protein_id=WP_001018479.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1841329 1841650 . - . ID=gene1800;Name=SH03_RS09015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS09015;old_locus_tag=SH03_09010;pseudo=true NZ_CP010441.1 Protein Homology CDS 1841329 1841650 . - 0 ID=cds1739;Parent=gene1800;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 1841686 1842515 . + . ID=gene1801;Name=SH03_RS09020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS09020;pseudo=true NZ_CP010441.1 Protein Homology CDS 1841686 1842515 . + 0 ID=cds1740;Parent=gene1801;exception=annotated by transcript or proteomic data;gbkey=CDS;product=iron permease;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 1842573 1843700 . + . ID=gene1802;Name=SH03_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09025;old_locus_tag=SH03_09020 NZ_CP010441.1 Protein Homology CDS 1842573 1843700 . + 0 ID=cds1741;Parent=gene1802;Dbxref=Genbank:WP_000154398.1;Name=WP_000154398.1;Note=with EfeUB forms an iron transport system which is silent in E. coli K-12 due to a mutation in EfeU;gbkey=CDS;product=iron uptake system component EfeO;protein_id=WP_000154398.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1843706 1844977 . + . ID=gene1803;Name=SH03_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09030;old_locus_tag=SH03_09025 NZ_CP010441.1 Protein Homology CDS 1843706 1844977 . + 0 ID=cds1742;Parent=gene1803;Dbxref=Genbank:WP_001199471.1;Name=WP_001199471.1;gbkey=CDS;product=deferrochelatase/peroxidase EfeB;protein_id=WP_001199471.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1844895 1845242 . - . ID=gene1804;Name=SH03_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09035;old_locus_tag=SH03_09030 NZ_CP010441.1 Protein Homology CDS 1844895 1845242 . - 0 ID=cds1743;Parent=gene1804;Dbxref=Genbank:WP_001326842.1;Name=WP_001326842.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001326842.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1845598 1846386 . + . ID=gene1805;Name=SH03_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09040;old_locus_tag=SH03_09035 NZ_CP010441.1 Protein Homology CDS 1845598 1846386 . + 0 ID=cds1744;Parent=gene1805;Dbxref=Genbank:WP_000533522.1;Name=WP_000533522.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000533522.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1846436 1846849 . - . ID=gene1806;Name=pgaD;gbkey=Gene;gene=pgaD;gene_biotype=protein_coding;locus_tag=SH03_RS09045;old_locus_tag=SH03_09040 NZ_CP010441.1 Protein Homology CDS 1846436 1846849 . - 0 ID=cds1745;Parent=gene1806;Dbxref=Genbank:WP_001061095.1;Name=WP_001061095.1;Note=in Yersinia this gene is involved in biofilm formation and hemin adsorption%3B in Escherichia coli it is involved in PGA biosynthesis and export;gbkey=CDS;gene=pgaD;product=poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD;protein_id=WP_001061095.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1846851 1848089 . - . ID=gene1807;Name=SH03_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09050;old_locus_tag=SH03_09045 NZ_CP010441.1 Protein Homology CDS 1846851 1848089 . - 0 ID=cds1746;Parent=gene1807;Dbxref=Genbank:WP_000984477.1;Name=WP_000984477.1;Note=predicted polysaccharide polymerase involved in biofilm formation%3B required for the synthesis of the beta-1%2C6-N-acetylglucosamine polysaccharide%3B PgaC%3B in Yersinia the HmsR protein is an inner membrane protein;gbkey=CDS;product=N-glycosyltransferase;protein_id=WP_000984477.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1848169 1850187 . - . ID=gene1808;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=SH03_RS09055;old_locus_tag=SH03_09050 NZ_CP010441.1 Protein Homology CDS 1848169 1850187 . - 0 ID=cds1747;Parent=gene1808;Dbxref=Genbank:WP_000945561.1;Name=WP_000945561.1;Note=in Yersinia this protein is involved in biofilm formation and hemin adsorption%3B related protein PgaB in Escherichia coli is an outer membrane N-deacetylase involved in poly-beta-1%2C6-N-acetyl-D-glucosamine (PGA) export;gbkey=CDS;gene=pgaB;product=poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase;protein_id=WP_000945561.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1850196 1852619 . - . ID=gene1809;Name=pgaA;gbkey=Gene;gene=pgaA;gene_biotype=protein_coding;gene_synonym=hmsH,ycdS;locus_tag=SH03_RS09060;old_locus_tag=SH03_09055 NZ_CP010441.1 Protein Homology CDS 1850196 1852619 . - 0 ID=cds1748;Parent=gene1809;Dbxref=Genbank:WP_000287458.1;Name=WP_000287458.1;Note=outer membrane protein essential for the synthesis of poly-beta-1%2C6-N-acetyl-D-glucosamine (PGA)%3B adhesin required for biofilm formation%3B PgaA (HmsH) seems to translocate and/or dock PGA to the cell surface%3B member of the hmsHFRS (ycdSRQP or pgaABCD in Escherichia coli) operon in Yersinia;gbkey=CDS;gene=pgaA;product=poly-beta-1%2C6-N-acetyl-D-glucosamine export protein;protein_id=WP_000287458.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1853206 1854564 . + . ID=gene1810;Name=SH03_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09065;old_locus_tag=SH03_09060 NZ_CP010441.1 Protein Homology CDS 1853206 1854564 . + 0 ID=cds1749;Parent=gene1810;Dbxref=Genbank:WP_000409873.1;Name=WP_000409873.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_000409873.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1854574 1855833 . + . ID=id122;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1854605 1855471 . - . ID=gene1811;Name=SH03_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09070;old_locus_tag=SH03_09065 NZ_CP010441.1 Protein Homology CDS 1854605 1855471 . - 0 ID=cds1750;Parent=gene1811;Dbxref=Genbank:WP_000878218.1;Name=WP_000878218.1;gbkey=CDS;product=transposase;protein_id=WP_000878218.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1855468 1855767 . - . ID=gene1812;Name=SH03_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09075;old_locus_tag=SH03_09070 NZ_CP010441.1 Protein Homology CDS 1855468 1855767 . - 0 ID=cds1751;Parent=gene1812;Dbxref=Genbank:WP_000169527.1;Name=WP_000169527.1;gbkey=CDS;product=transposase;protein_id=WP_000169527.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1855853 1856176 . + . ID=gene1813;Name=SH03_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09080;old_locus_tag=SH03_09075 NZ_CP010441.1 Protein Homology CDS 1855853 1856176 . + 0 ID=cds1752;Parent=gene1813;Dbxref=Genbank:WP_000389396.1;Name=WP_000389396.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000389396.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1856173 1857159 . + . ID=gene1814;Name=SH03_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09085;old_locus_tag=SH03_09080 NZ_CP010441.1 Protein Homology CDS 1856173 1857159 . + 0 ID=cds1753;Parent=gene1814;Dbxref=Genbank:WP_000611859.1;Name=WP_000611859.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000611859.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1857291 1858170 . + . ID=id123;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1857431 1857529 . + . ID=gene1815;Name=SH03_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09090;old_locus_tag=SH03_09085 NZ_CP010441.1 Protein Homology CDS 1857431 1857529 . + 0 ID=cds1754;Parent=gene1815;Dbxref=Genbank:WP_032144031.1;Name=WP_032144031.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032144031.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1858076 1858163 . - . ID=gene1816;Name=SH03_RS09095;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS09095;old_locus_tag=SH03_09090 NZ_CP010441.1 tRNAscan-SE tRNA 1858076 1858163 . - . ID=rna61;Parent=gene1816;anticodon=(pos:complement(1858127..1858129));gbkey=tRNA;product=tRNA-Ser NZ_CP010441.1 tRNAscan-SE exon 1858076 1858163 . - . ID=id124;Parent=rna61;anticodon=(pos:complement(1858127..1858129));gbkey=tRNA;product=tRNA-Ser NZ_CP010441.1 RefSeq gene 1858397 1859335 . + . ID=gene1817;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=SH03_RS09100;old_locus_tag=SH03_09095 NZ_CP010441.1 Protein Homology CDS 1858397 1859335 . + 0 ID=cds1755;Parent=gene1817;Dbxref=Genbank:WP_000351317.1;Name=WP_000351317.1;Note=catalyzes the formation of glycolate and glycerate from glyoxylate and hydroxypyruvate%2C respectively;gbkey=CDS;gene=ghrA;product=glyoxylate/hydroxypyruvate reductase A;protein_id=WP_000351317.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1859390 1860127 . + . ID=gene1818;Name=SH03_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09105;old_locus_tag=SH03_09100 NZ_CP010441.1 Protein Homology CDS 1859390 1860127 . + 0 ID=cds1756;Parent=gene1818;Dbxref=Genbank:WP_000283667.1;Name=WP_000283667.1;gbkey=CDS;product=phosphatase;protein_id=WP_000283667.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1860151 1860705 . + . ID=gene1819;Name=SH03_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09110;old_locus_tag=SH03_09105 NZ_CP010441.1 Protein Homology CDS 1860151 1860705 . + 0 ID=cds1757;Parent=gene1819;Dbxref=Genbank:WP_001001921.1;Name=WP_001001921.1;gbkey=CDS;product=chaperone protein YcdY;protein_id=WP_001001921.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1860807 1861298 . + . ID=gene1820;Name=SH03_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09115;old_locus_tag=SH03_09110 NZ_CP010441.1 Protein Homology CDS 1860807 1861298 . + 0 ID=cds1758;Parent=gene1820;Dbxref=Genbank:WP_001300785.1;Name=WP_001300785.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001300785.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1861362 1862195 . - . ID=gene1821;Name=SH03_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09120;old_locus_tag=SH03_09115 NZ_CP010441.1 Protein Homology CDS 1861362 1862195 . - 0 ID=cds1759;Parent=gene1821;Dbxref=Genbank:WP_001189321.1;Name=WP_001189321.1;Note=involved in the stability of the curlin proteins during assembly%3B involved in the secretion of the major curlin subunit CsgA across the outer membrane;gbkey=CDS;product=curli production assembly/transport component CsgG;protein_id=WP_001189321.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1862222 1862638 . - . ID=gene1822;Name=SH03_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09125;old_locus_tag=SH03_09120 NZ_CP010441.1 Protein Homology CDS 1862222 1862638 . - 0 ID=cds1760;Parent=gene1822;Dbxref=Genbank:WP_001264088.1;Name=WP_001264088.1;Note=nucleator protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation)%3B part of the curli secretion and assembly protein complex;gbkey=CDS;product=curli production assembly/transport component CsgF;protein_id=WP_001264088.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1862663 1863052 . - . ID=gene1823;Name=SH03_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09130;old_locus_tag=SH03_09125 NZ_CP010441.1 Protein Homology CDS 1862663 1863052 . - 0 ID=cds1761;Parent=gene1823;Dbxref=Genbank:WP_000833288.1;Name=WP_000833288.1;Note=chaperone-like protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation)%3B part of the curli secretion and assembly protein complex;gbkey=CDS;product=curli production assembly/transport component CsgE;protein_id=WP_000833288.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1863057 1863707 . - . ID=gene1824;Name=SH03_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09135;old_locus_tag=SH03_09130 NZ_CP010441.1 Protein Homology CDS 1863057 1863707 . - 0 ID=cds1762;Parent=gene1824;Dbxref=Genbank:WP_000481509.1;Name=WP_000481509.1;Note=activates the csgBA and csgDEFG operons involved in biofilm formation;gbkey=CDS;product=CsgBAC operon transcriptional regulatory protein;protein_id=WP_000481509.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1864174 1864359 . - . ID=gene1825;Name=SH03_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09140;old_locus_tag=SH03_09135 NZ_CP010441.1 Protein Homology CDS 1864174 1864359 . - 0 ID=cds1763;Parent=gene1825;Dbxref=Genbank:WP_001310711.1;Name=WP_001310711.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001310711.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1864462 1864917 . + . ID=gene1826;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=SH03_RS09145;old_locus_tag=SH03_09140 NZ_CP010441.1 Protein Homology CDS 1864462 1864917 . + 0 ID=cds1764;Parent=gene1826;Dbxref=Genbank:WP_000791650.1;Name=WP_000791650.1;Note=CsgB%3B functions as a nucleator in the assembly of curli (coiled surface structures) on the cell surface;gbkey=CDS;gene=csgB;product=minor curlin subunit;protein_id=WP_000791650.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1864958 1865413 . + . ID=gene1827;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=SH03_RS09150;old_locus_tag=SH03_09145 NZ_CP010441.1 Protein Homology CDS 1864958 1865413 . + 0 ID=cds1765;Parent=gene1827;Dbxref=Genbank:WP_000771437.1;Name=WP_000771437.1;Note=the major structural subunit of curlin which assemble to form curli which can bind to fibronectin;gbkey=CDS;gene=csgA;product=major curlin subunit;protein_id=WP_000771437.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1865472 1865804 . + . ID=gene1828;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=SH03_RS09155;old_locus_tag=SH03_09150 NZ_CP010441.1 Protein Homology CDS 1865472 1865804 . + 0 ID=cds1766;Parent=gene1828;Dbxref=Genbank:WP_001094300.1;Name=WP_001094300.1;Note=involved in autoagglutination of curliated cells%3B not involved in production of curli fibers;gbkey=CDS;gene=csgC;product=curli assembly protein CsgC;protein_id=WP_001094300.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1865925 1866236 . + . ID=gene1829;Name=SH03_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09160;old_locus_tag=SH03_09155 NZ_CP010441.1 Protein Homology CDS 1865925 1866236 . + 0 ID=cds1767;Parent=gene1829;Dbxref=Genbank:WP_000489587.1;Name=WP_000489587.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000489587.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1866331 1866864 . + . ID=gene1830;Name=SH03_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09165;old_locus_tag=SH03_09160 NZ_CP010441.1 Protein Homology CDS 1866331 1866864 . + 0 ID=cds1768;Parent=gene1830;Dbxref=Genbank:WP_000857405.1;Name=WP_000857405.1;Note=interacts and inactivates RNase III during cold shock;gbkey=CDS;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_000857405.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1866866 1868287 . + . ID=gene1831;Name=SH03_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09170;old_locus_tag=SH03_09165 NZ_CP010441.1 Protein Homology CDS 1866866 1868287 . + 0 ID=cds1769;Parent=gene1831;Dbxref=Genbank:WP_001299031.1;Name=WP_001299031.1;gbkey=CDS;product=cardiolipin synthase C;protein_id=WP_001299031.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1868295 1869452 . - . ID=gene1832;Name=opgC;gbkey=Gene;gene=opgC;gene_biotype=protein_coding;gene_synonym=mdoC;locus_tag=SH03_RS09175;old_locus_tag=SH03_09170 NZ_CP010441.1 Protein Homology CDS 1868295 1869452 . - 0 ID=cds1770;Parent=gene1832;Dbxref=Genbank:WP_001070375.1;Name=WP_001070375.1;Note=required for the transfer of succinyl residues to osmoregulated periplasmic glucans;gbkey=CDS;gene=opgC;product=glucan biosynthesis protein C;protein_id=WP_001070375.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1869497 1869640 . - . ID=gene1833;Name=SH03_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09180;old_locus_tag=SH03_09175 NZ_CP010441.1 Protein Homology CDS 1869497 1869640 . - 0 ID=cds1771;Parent=gene1833;Dbxref=Genbank:WP_001111219.1;Name=WP_001111219.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001111219.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1869644 1869775 . - . ID=gene1834;Name=SH03_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09185;old_locus_tag=SH03_09180 NZ_CP010441.1 Protein Homology CDS 1869644 1869775 . - 0 ID=cds1772;Parent=gene1834;Dbxref=Genbank:WP_001299036.1;Name=WP_001299036.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001299036.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1869828 1871381 . + . ID=gene1835;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;gene_synonym=opgG;locus_tag=SH03_RS09190;old_locus_tag=SH03_09185 NZ_CP010441.1 Protein Homology CDS 1869828 1871381 . + 0 ID=cds1773;Parent=gene1835;Dbxref=Genbank:WP_000681072.1;Name=WP_000681072.1;Note=involved in the biosynthesis of osmoregulated periplasmic glucans%3B required for the assembly of the polyglucose structure of glucan;gbkey=CDS;gene=mdoG;product=glucan biosynthesis protein G;protein_id=WP_000681072.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1871404 1873917 . + . ID=gene1836;Name=SH03_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09195;old_locus_tag=SH03_09190 NZ_CP010441.1 Protein Homology CDS 1871404 1873917 . + 0 ID=cds1774;Parent=gene1836;Dbxref=Genbank:WP_024181919.1;Name=WP_024181919.1;Note=necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space;gbkey=CDS;product=glucosyltransferase MdoH;protein_id=WP_024181919.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1874090 1874317 . + . ID=gene1837;Name=SH03_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09200;old_locus_tag=SH03_09195 NZ_CP010441.1 Protein Homology CDS 1874090 1874317 . + 0 ID=cds1775;Parent=gene1837;Dbxref=Genbank:WP_001237205.1;Name=WP_001237205.1;gbkey=CDS;product=outer membrane integrity lipoprotein;protein_id=WP_001237205.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1874318 1874692 . - . ID=gene1838;Name=SH03_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09205;old_locus_tag=SH03_09200 NZ_CP010441.1 Protein Homology CDS 1874318 1874692 . - 0 ID=cds1776;Parent=gene1838;Dbxref=Genbank:WP_000180056.1;Name=WP_000180056.1;gbkey=CDS;product=acidic protein MsyB;protein_id=WP_000180056.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1874722 1874820 . - . ID=gene1839;Name=SH03_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09210;old_locus_tag=SH03_09205 NZ_CP010441.1 Protein Homology CDS 1874722 1874820 . - 0 ID=cds1777;Parent=gene1839;Dbxref=Genbank:WP_001303909.1;Name=WP_001303909.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001303909.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1874775 1876001 . - . ID=gene1840;Name=SH03_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09215;old_locus_tag=SH03_09210 NZ_CP010441.1 Protein Homology CDS 1874775 1876001 . - 0 ID=cds1778;Parent=gene1840;Dbxref=Genbank:WP_000074172.1;Name=WP_000074172.1;Note=Confers resistance to fosfomycin and deoxycholate;gbkey=CDS;product=multidrug resistance protein MdtG;protein_id=WP_000074172.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1876173 1877093 . - . ID=gene1841;Name=SH03_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09220;old_locus_tag=SH03_09215 NZ_CP010441.1 Protein Homology CDS 1876173 1877093 . - 0 ID=cds1779;Parent=gene1841;Dbxref=Genbank:WP_000183364.1;Name=WP_000183364.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA;gbkey=CDS;product=lipid A biosynthesis lauroyltransferase;protein_id=WP_000183364.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1877318 1878370 . + . ID=gene1842;Name=SH03_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09225;old_locus_tag=SH03_09220 NZ_CP010441.1 Protein Homology CDS 1877318 1878370 . + 0 ID=cds1780;Parent=gene1842;Dbxref=Genbank:WP_001144615.1;Name=WP_001144615.1;gbkey=CDS;product=rhodanese-related sulfurtransferase;protein_id=WP_001144615.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1878412 1878987 . - . ID=gene1843;Name=SH03_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09230;old_locus_tag=SH03_09225 NZ_CP010441.1 Protein Homology CDS 1878412 1878987 . - 0 ID=cds1781;Parent=gene1843;Dbxref=Genbank:WP_000749261.1;Name=WP_000749261.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000749261.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1878991 1879557 . - . ID=gene1844;Name=SH03_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09235;old_locus_tag=SH03_09230 NZ_CP010441.1 Protein Homology CDS 1878991 1879557 . - 0 ID=cds1782;Parent=gene1844;Dbxref=Genbank:WP_000011114.1;Name=WP_000011114.1;gbkey=CDS;product=cytochrome b561 homolog 2;protein_id=WP_000011114.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1879818 1879931 . - . ID=gene1845;Name=SH03_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09240;old_locus_tag=SH03_09235 NZ_CP010441.1 Protein Homology CDS 1879818 1879931 . - 0 ID=cds1783;Parent=gene1845;Dbxref=Genbank:WP_001253418.1;Name=WP_001253418.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001253418.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1879979 1881097 . - . ID=gene1846;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=SH03_RS09245;old_locus_tag=SH03_09240 NZ_CP010441.1 Protein Homology CDS 1879979 1881097 . - 0 ID=cds1784;Parent=gene1846;Dbxref=Genbank:WP_000872833.1;Name=WP_000872833.1;Note=catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde%3B FAD-binding%3B can also catalyze the demethylation of other N-methyl amino acids;gbkey=CDS;gene=solA;product=N-methyl-L-tryptophan oxidase;protein_id=WP_000872833.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1881212 1881466 . - . ID=gene1847;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;gene_synonym=yceP;locus_tag=SH03_RS09250;old_locus_tag=SH03_09245 NZ_CP010441.1 Protein Homology CDS 1881212 1881466 . - 0 ID=cds1785;Parent=gene1847;Dbxref=Genbank:WP_000414438.1;Name=WP_000414438.1;Note=BssS%3B regulator of biofilm through signal secretion%3B disruption of this gene in Escherichia coli led to effects on biofilm formation%2C alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing;gbkey=CDS;gene=bssS;product=biofilm regulator BssS;protein_id=WP_000414438.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1881753 1881998 . - . ID=gene1848;Name=SH03_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09255;old_locus_tag=SH03_09250 NZ_CP010441.1 Protein Homology CDS 1881753 1881998 . - 0 ID=cds1786;Parent=gene1848;Dbxref=Genbank:WP_001217754.1;Name=WP_001217754.1;gbkey=CDS;product=DNA-damage-inducible protein I;protein_id=WP_001217754.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1882072 1883118 . - . ID=gene1849;Name=SH03_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09260;old_locus_tag=SH03_09255 NZ_CP010441.1 Protein Homology CDS 1882072 1883118 . - 0 ID=cds1787;Parent=gene1849;Dbxref=Genbank:WP_000126534.1;Name=WP_000126534.1;gbkey=CDS;product=dihydroorotase;protein_id=WP_000126534.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1883224 1883784 . - . ID=gene1850;Name=SH03_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09265;old_locus_tag=SH03_09260 NZ_CP010441.1 Protein Homology CDS 1883224 1883784 . - 0 ID=cds1788;Parent=gene1850;Dbxref=Genbank:WP_001295443.1;Name=WP_001295443.1;gbkey=CDS;product=lipoprotein;protein_id=WP_001295443.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1883918 1884565 . - . ID=gene1851;Name=SH03_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09270;old_locus_tag=SH03_09265 NZ_CP010441.1 Protein Homology CDS 1883918 1884565 . - 0 ID=cds1789;Parent=gene1851;Dbxref=Genbank:WP_000780912.1;Name=WP_000780912.1;Note=cofactor involved in the reduction of disulfides;gbkey=CDS;product=glutaredoxin;protein_id=WP_000780912.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1884629 1885837 . - . ID=gene1852;Name=SH03_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09275;old_locus_tag=SH03_09270 NZ_CP010441.1 Protein Homology CDS 1884629 1885837 . - 0 ID=cds1790;Parent=gene1852;Dbxref=Genbank:WP_000092206.1;Name=WP_000092206.1;Note=Confers resistance to norfloxacin and enoxacin;gbkey=CDS;product=multidrug resistance protein MdtH;protein_id=WP_000092206.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1886073 1886657 . + . ID=gene1853;Name=SH03_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09280;old_locus_tag=SH03_09275 NZ_CP010441.1 Protein Homology CDS 1886073 1886657 . + 0 ID=cds1791;Parent=gene1853;Dbxref=Genbank:WP_000468186.1;Name=WP_000468186.1;gbkey=CDS;product=ribosomal-protein-alanine acetyltransferase;protein_id=WP_000468186.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1886668 1887315 . + . ID=gene1854;Name=SH03_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09285;old_locus_tag=SH03_09280 NZ_CP010441.1 Protein Homology CDS 1886668 1887315 . + 0 ID=cds1792;Parent=gene1854;Dbxref=Genbank:WP_000877107.1;Name=WP_000877107.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000877107.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1887317 1888240 . + . ID=gene1855;Name=SH03_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09290;old_locus_tag=SH03_09285 NZ_CP010441.1 Protein Homology CDS 1887317 1888240 . + 0 ID=cds1793;Parent=gene1855;Dbxref=Genbank:WP_000736158.1;Name=WP_000736158.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_000736158.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1888350 1889885 . + . ID=gene1856;Name=SH03_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09295;old_locus_tag=SH03_09290 NZ_CP010441.1 Protein Homology CDS 1888350 1889885 . + 0 ID=cds1794;Parent=gene1856;Dbxref=Genbank:WP_001050683.1;Name=WP_001050683.1;gbkey=CDS;product=lipid II flippase MurJ;protein_id=WP_001050683.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1889925 1890341 . - . ID=gene1857;Name=SH03_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09300;old_locus_tag=SH03_09295 NZ_CP010441.1 Protein Homology CDS 1889925 1890341 . - 0 ID=cds1795;Parent=gene1857;Dbxref=Genbank:WP_000197363.1;Name=WP_000197363.1;Note=export chaperone for FlgK and FlgL;gbkey=CDS;product=flagella synthesis protein FlgN;protein_id=WP_000197363.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1890346 1890639 . - . ID=gene1858;Name=SH03_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09305;old_locus_tag=SH03_09300 NZ_CP010441.1 Protein Homology CDS 1890346 1890639 . - 0 ID=cds1796;Parent=gene1858;Dbxref=Genbank:WP_000020880.1;Name=WP_000020880.1;Note=regulates the flagellar specific sigma28 transcription factor;gbkey=CDS;product=negative regulator of flagellin synthesis;protein_id=WP_000020880.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1890715 1891374 . - . ID=gene1859;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=SH03_RS09310;old_locus_tag=SH03_09305 NZ_CP010441.1 Protein Homology CDS 1890715 1891374 . - 0 ID=cds1797;Parent=gene1859;Dbxref=Genbank:WP_000905458.1;Name=WP_000905458.1;Note=required for the assembly of the flagellar basal body P-ring;gbkey=CDS;gene=flgA;product=flagella basal body P-ring formation protein FlgA;protein_id=WP_000905458.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1891529 1891945 . + . ID=gene1860;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=SH03_RS09315;old_locus_tag=SH03_09310 NZ_CP010441.1 Protein Homology CDS 1891529 1891945 . + 0 ID=cds1798;Parent=gene1860;Dbxref=Genbank:WP_000884702.1;Name=WP_000884702.1;Note=with FlgF and C makes up the proximal portion of the flagellar basal body rod%3B Vibrio parahaemolyticus protein is associated with the polar flagella;gbkey=CDS;gene=flgB;product=flagellar biosynthesis protein FlgB;protein_id=WP_000884702.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1891949 1892353 . + . ID=gene1861;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=SH03_RS09320;old_locus_tag=SH03_09315 NZ_CP010441.1 Protein Homology CDS 1891949 1892353 . + 0 ID=cds1799;Parent=gene1861;Dbxref=Genbank:WP_001196460.1;Name=WP_001196460.1;Note=with FlgF and B makes up the proximal portion of the flagellar basal body rod;gbkey=CDS;gene=flgC;product=flagellar basal-body rod protein FlgC;protein_id=WP_001196460.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1892365 1893060 . + . ID=gene1862;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=SH03_RS09325;old_locus_tag=SH03_09320 NZ_CP010441.1 Protein Homology CDS 1892365 1893060 . + 0 ID=cds1800;Parent=gene1862;Dbxref=Genbank:WP_000020486.1;Name=WP_000020486.1;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production;gbkey=CDS;gene=flgD;product=flagellar basal body rod modification protein FlgD;protein_id=WP_000020486.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1893085 1894293 . + . ID=gene1863;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=SH03_RS09330;old_locus_tag=SH03_09325 NZ_CP010441.1 Protein Homology CDS 1893085 1894293 . + 0 ID=cds1801;Parent=gene1863;Dbxref=Genbank:WP_000885873.1;Name=WP_000885873.1;Note=the hook connects flagellar basal body to the flagellar filament;gbkey=CDS;gene=flgE;product=flagellar hook protein FlgE;protein_id=WP_000885873.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1894313 1895068 . + . ID=gene1864;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=SH03_RS09335;old_locus_tag=SH03_09330 NZ_CP010441.1 Protein Homology CDS 1894313 1895068 . + 0 ID=cds1802;Parent=gene1864;Dbxref=Genbank:WP_000349316.1;Name=WP_000349316.1;Note=FlgF%2C with FlgB and C%2C makes up the proximal portion of the flagellar basal body rod;gbkey=CDS;gene=flgF;product=flagellar basal-body rod protein FlgF;protein_id=WP_000349316.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1895240 1896022 . + . ID=gene1865;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=SH03_RS09340;old_locus_tag=SH03_09335 NZ_CP010441.1 Protein Homology CDS 1895240 1896022 . + 0 ID=cds1803;Parent=gene1865;Dbxref=Genbank:WP_000625837.1;Name=WP_000625837.1;Note=makes up the distal portion of the flagellar basal body rod;gbkey=CDS;gene=flgG;product=flagellar basal body rod protein FlgG;protein_id=WP_000625837.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1896075 1896773 . + . ID=gene1866;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=SH03_RS09345;old_locus_tag=SH03_09340 NZ_CP010441.1 Protein Homology CDS 1896075 1896773 . + 0 ID=cds1804;Parent=gene1866;Dbxref=Genbank:WP_001295442.1;Name=WP_001295442.1;Note=part of the flagellar basal body which consists of four rings L%2CP%2C S and M mounted on a central rod;gbkey=CDS;gene=flgH;product=flagellar L-ring protein;protein_id=WP_001295442.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1896785 1897882 . + . ID=gene1867;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=SH03_RS09350;old_locus_tag=SH03_09345 NZ_CP010441.1 Protein Homology CDS 1896785 1897882 . + 0 ID=cds1805;Parent=gene1867;Dbxref=Genbank:WP_000589326.1;Name=WP_000589326.1;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B Vibrio parahaemolyticus%2C Yersinia%2C Bradyrhizobium and other bacteria have two copies of this and other flagellar genes%3B the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum;gbkey=CDS;gene=flgI;product=flagellar P-ring protein;protein_id=WP_000589326.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1897882 1898823 . + . ID=gene1868;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=SH03_RS09355;old_locus_tag=SH03_09350 NZ_CP010441.1 Protein Homology CDS 1897882 1898823 . + 0 ID=cds1806;Parent=gene1868;Dbxref=Genbank:WP_001295441.1;Name=WP_001295441.1;Note=Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space;gbkey=CDS;gene=flgJ;product=peptidoglycan hydrolase FlgJ;protein_id=WP_001295441.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1898889 1900532 . + . ID=gene1869;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=SH03_RS09360;old_locus_tag=SH03_09355 NZ_CP010441.1 Protein Homology CDS 1898889 1900532 . + 0 ID=cds1807;Parent=gene1869;Dbxref=Genbank:WP_000096479.1;Name=WP_000096479.1;Note=with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook;gbkey=CDS;gene=flgK;product=flagellar hook-associated protein 1;protein_id=WP_000096479.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1900544 1901497 . + . ID=gene1870;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=SH03_RS09365;old_locus_tag=SH03_09360 NZ_CP010441.1 Protein Homology CDS 1900544 1901497 . + 0 ID=cds1808;Parent=gene1870;Dbxref=Genbank:WP_001212782.1;Name=WP_001212782.1;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes;gbkey=CDS;gene=flgL;product=flagellar hook-associated protein;protein_id=WP_001212782.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1901693 1904878 . - . ID=gene1871;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=SH03_RS09370;old_locus_tag=SH03_09365 NZ_CP010441.1 Protein Homology CDS 1901693 1904878 . - 0 ID=cds1809;Parent=gene1871;Dbxref=Genbank:WP_000827360.1;Name=WP_000827360.1;Note=bifunctional ribonuclease E/endoribonuclease/RNA-binding protein/RNA degradosome binding protein%3B forms part of the membrane-associated degradosome complex along with PNPase%2C RhlB%2C and enolase;gbkey=CDS;gene=rne;product=ribonuclease E;protein_id=WP_000827360.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1905013 1905333 . + . ID=gene1872;Name=SH03_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09375;old_locus_tag=SH03_09370 NZ_CP010441.1 Protein Homology CDS 1905013 1905333 . + 0 ID=cds1810;Parent=gene1872;Dbxref=Genbank:WP_001295962.1;Name=WP_001295962.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001295962.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1905451 1906410 . + . ID=gene1873;Name=SH03_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09380;old_locus_tag=SH03_09375 NZ_CP010441.1 Protein Homology CDS 1905451 1906410 . + 0 ID=cds1811;Parent=gene1873;Dbxref=Genbank:WP_000846343.1;Name=WP_000846343.1;Note=catalyzes the transformation of uracil to pseudouracil at nucleotides U955%2C U2504%2C and U2580 in 23S rRNA;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase C;protein_id=WP_000846343.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1906522 1907106 . - . ID=gene1874;Name=SH03_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09385;old_locus_tag=SH03_09380 NZ_CP010441.1 Protein Homology CDS 1906522 1907106 . - 0 ID=cds1812;Parent=gene1874;Dbxref=Genbank:WP_001125202.1;Name=WP_001125202.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;product=m(7)GTP pyrophosphatase;protein_id=WP_001125202.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1907305 1907826 . + . ID=gene1875;Name=SH03_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09390;old_locus_tag=SH03_09385 NZ_CP010441.1 Protein Homology CDS 1907305 1907826 . + 0 ID=cds1813;Parent=gene1875;Dbxref=Genbank:WP_001174481.1;Name=WP_001174481.1;gbkey=CDS;product=DUF177 domain-containing protein;protein_id=WP_001174481.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1907878 1908051 . + . ID=gene1876;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=SH03_RS09395;old_locus_tag=SH03_09390 NZ_CP010441.1 Protein Homology CDS 1907878 1908051 . + 0 ID=cds1814;Parent=gene1876;Dbxref=Genbank:WP_000290727.1;Name=WP_000290727.1;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;gbkey=CDS;gene=rpmF;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1908162 1909202 . + . ID=gene1877;Name=SH03_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09400;old_locus_tag=SH03_09395 NZ_CP010441.1 Protein Homology CDS 1908162 1909202 . + 0 ID=cds1815;Parent=gene1877;Dbxref=Genbank:WP_014639043.1;Name=WP_014639043.1;gbkey=CDS;product=phosphate acyltransferase;protein_id=WP_014639043.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1909270 1910223 . + . ID=gene1878;Name=SH03_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09405;old_locus_tag=SH03_09400 NZ_CP010441.1 Protein Homology CDS 1909270 1910223 . + 0 ID=cds1816;Parent=gene1878;Dbxref=Genbank:WP_000288132.1;Name=WP_000288132.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;product=3-oxoacyl-ACP synthase III;protein_id=WP_000288132.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1910239 1911168 . + . ID=gene1879;Name=SH03_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09410;old_locus_tag=SH03_09405 NZ_CP010441.1 Protein Homology CDS 1910239 1911168 . + 0 ID=cds1817;Parent=gene1879;Dbxref=Genbank:WP_000191372.1;Name=WP_000191372.1;gbkey=CDS;product=malonyl CoA-ACP transacylase;protein_id=WP_000191372.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1911181 1911915 . + . ID=gene1880;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=SH03_RS09415;old_locus_tag=SH03_09410 NZ_CP010441.1 Protein Homology CDS 1911181 1911915 . + 0 ID=cds1818;Parent=gene1880;Dbxref=Genbank:WP_001008535.1;Name=WP_001008535.1;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;product=3-oxoacyl-ACP reductase;protein_id=WP_001008535.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1912126 1912362 . + . ID=gene1881;Name=SH03_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09420;old_locus_tag=SH03_09415 NZ_CP010441.1 Protein Homology CDS 1912126 1912362 . + 0 ID=cds1819;Parent=gene1881;Dbxref=Genbank:WP_000103754.1;Name=WP_000103754.1;Note=carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1912450 1913691 . + . ID=gene1882;Name=SH03_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09425;old_locus_tag=SH03_09420 NZ_CP010441.1 Protein Homology CDS 1912450 1913691 . + 0 ID=cds1820;Parent=gene1882;Dbxref=Genbank:WP_000044679.1;Name=WP_000044679.1;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;product=3-oxoacyl-ACP synthase II;protein_id=WP_000044679.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1913811 1914620 . + . ID=gene1883;Name=SH03_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09430;old_locus_tag=SH03_09425 NZ_CP010441.1 Protein Homology CDS 1913811 1914620 . + 0 ID=cds1821;Parent=gene1883;Dbxref=Genbank:WP_000478681.1;Name=WP_000478681.1;Note=catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate;gbkey=CDS;product=aminodeoxychorismate lyase;protein_id=WP_000478681.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1914623 1915645 . + . ID=gene1884;Name=SH03_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09435;old_locus_tag=SH03_09430 NZ_CP010441.1 Protein Homology CDS 1914623 1915645 . + 0 ID=cds1822;Parent=gene1884;Dbxref=Genbank:WP_000756827.1;Name=WP_000756827.1;gbkey=CDS;product=septation protein%2C ampicillin sensitivity;protein_id=WP_000756827.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1915635 1916276 . + . ID=gene1885;Name=SH03_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09440;old_locus_tag=SH03_09435 NZ_CP010441.1 Protein Homology CDS 1915635 1916276 . + 0 ID=cds1823;Parent=gene1885;Dbxref=Genbank:WP_001257000.1;Name=WP_001257000.1;gbkey=CDS;product=thymidylate kinase;protein_id=WP_001257000.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1916273 1917277 . + . ID=gene1886;Name=SH03_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09445;old_locus_tag=SH03_09440 NZ_CP010441.1 Protein Homology CDS 1916273 1917277 . + 0 ID=cds1824;Parent=gene1886;Dbxref=Genbank:WP_001267956.1;Name=WP_001267956.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA;gbkey=CDS;product=DNA polymerase III subunit delta';protein_id=WP_001267956.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1917288 1918085 . + . ID=gene1887;Name=SH03_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09450;old_locus_tag=SH03_09445 NZ_CP010441.1 Protein Homology CDS 1917288 1918085 . + 0 ID=cds1825;Parent=gene1887;Dbxref=Genbank:WP_000480245.1;Name=WP_000480245.1;gbkey=CDS;product=DNAse;protein_id=WP_000480245.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1918380 1919813 . + . ID=gene1888;Name=SH03_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09455;old_locus_tag=SH03_09450 NZ_CP010441.1 Protein Homology CDS 1918380 1919813 . + 0 ID=cds1826;Parent=gene1888;Dbxref=Genbank:WP_000475719.1;Name=WP_000475719.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS glucose EIICB component;protein_id=WP_000475719.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1919873 1922062 . - . ID=gene1889;Name=SH03_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09460;old_locus_tag=SH03_09455 NZ_CP010441.1 Protein Homology CDS 1919873 1922062 . - 0 ID=cds1827;Parent=gene1889;Dbxref=Genbank:WP_000953441.1;Name=WP_000953441.1;gbkey=CDS;product=fhuE receptor;protein_id=WP_000953441.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1922396 1922755 . + . ID=gene1890;Name=SH03_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09465;old_locus_tag=SH03_09460 NZ_CP010441.1 Protein Homology CDS 1922396 1922755 . + 0 ID=cds1828;Parent=gene1890;Dbxref=Genbank:WP_000807125.1;Name=WP_000807125.1;gbkey=CDS;product=HIT-like protein HinT;protein_id=WP_000807125.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1922758 1923135 . + . ID=gene1891;Name=SH03_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09470;old_locus_tag=SH03_09465 NZ_CP010441.1 Protein Homology CDS 1922758 1923135 . + 0 ID=cds1829;Parent=gene1891;Dbxref=Genbank:WP_001225295.1;Name=WP_001225295.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001225295.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1923149 1923790 . + . ID=gene1892;Name=SH03_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09475;old_locus_tag=SH03_09470 NZ_CP010441.1 Protein Homology CDS 1923149 1923790 . + 0 ID=cds1830;Parent=gene1892;Dbxref=Genbank:WP_000164439.1;Name=WP_000164439.1;gbkey=CDS;product=penicillin-binding protein activator LpoB;protein_id=WP_000164439.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1923771 1924595 . + . ID=gene1893;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=SH03_RS09480;old_locus_tag=SH03_09475 NZ_CP010441.1 Protein Homology CDS 1923771 1924595 . + 0 ID=cds1831;Parent=gene1893;Dbxref=Genbank:WP_001116592.1;Name=WP_001116592.1;Note=catalyzes the phosphorylation of thiamine to thiamine phosphate;gbkey=CDS;gene=thiK;product=thiamine kinase;protein_id=WP_001116592.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1924606 1925631 . + . ID=gene1894;Name=SH03_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09485;old_locus_tag=SH03_09480 NZ_CP010441.1 Protein Homology CDS 1924606 1925631 . + 0 ID=cds1832;Parent=gene1894;Dbxref=Genbank:WP_000529320.1;Name=WP_000529320.1;Note=hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides;gbkey=CDS;product=beta-hexosaminidase;protein_id=WP_000529320.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1925654 1926196 . + . ID=gene1895;Name=SH03_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09490;old_locus_tag=SH03_09485 NZ_CP010441.1 Protein Homology CDS 1925654 1926196 . + 0 ID=cds1833;Parent=gene1895;Dbxref=Genbank:WP_000587933.1;Name=WP_000587933.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000587933.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1926596 1927900 . + . ID=gene1896;Name=SH03_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09495;old_locus_tag=SH03_09490 NZ_CP010441.1 Protein Homology CDS 1926596 1927900 . + 0 ID=cds1834;Parent=gene1896;Dbxref=Genbank:WP_000211045.1;Name=WP_000211045.1;gbkey=CDS;product=NADH dehydrogenase;protein_id=WP_000211045.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1928110 1928649 . + . ID=gene1897;Name=SH03_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09500;old_locus_tag=SH03_09495 NZ_CP010441.1 Protein Homology CDS 1928110 1928649 . + 0 ID=cds1835;Parent=gene1897;Dbxref=Genbank:WP_001043459.1;Name=WP_001043459.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001043459.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1928711 1929343 . - . ID=gene1898;Name=SH03_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09505;old_locus_tag=SH03_09500 NZ_CP010441.1 Protein Homology CDS 1928711 1929343 . - 0 ID=cds1836;Parent=gene1898;Dbxref=Genbank:WP_001336528.1;Name=WP_001336528.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001336528.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1929584 1929841 . + . ID=gene1899;Name=SH03_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09510;old_locus_tag=SH03_09505 NZ_CP010441.1 Protein Homology CDS 1929584 1929841 . + 0 ID=cds1837;Parent=gene1899;Dbxref=Genbank:WP_000800153.1;Name=WP_000800153.1;gbkey=CDS;product=multiple stress resistance protein BhsA;protein_id=WP_000800153.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1929923 1930882 . - . ID=gene1900;Name=SH03_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09515;old_locus_tag=SH03_09510 NZ_CP010441.1 Protein Homology CDS 1929923 1930882 . - 0 ID=cds1838;Parent=gene1900;Dbxref=Genbank:WP_000598207.1;Name=WP_000598207.1;gbkey=CDS;product=peptidoglycan-binding protein LysM;protein_id=WP_000598207.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1931029 1934475 . - . ID=gene1901;Name=SH03_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09520;old_locus_tag=SH03_09515 NZ_CP010441.1 Protein Homology CDS 1931029 1934475 . - 0 ID=cds1839;Parent=gene1901;Dbxref=Genbank:WP_001115094.1;Name=WP_001115094.1;gbkey=CDS;product=transcription-repair-coupling factor;protein_id=WP_001115094.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1934603 1935676 . - . ID=gene1902;Name=SH03_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09525;old_locus_tag=SH03_09520 NZ_CP010441.1 Protein Homology CDS 1934603 1935676 . - 0 ID=cds1840;Parent=gene1902;Dbxref=Genbank:WP_000810253.1;Name=WP_000810253.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000810253.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1935938 1937137 . + . ID=gene1903;Name=SH03_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09530;old_locus_tag=SH03_09525 NZ_CP010441.1 Protein Homology CDS 1935938 1937137 . + 0 ID=cds1841;Parent=gene1903;Dbxref=Genbank:WP_000284714.1;Name=WP_000284714.1;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;gbkey=CDS;product=lipoprotein-releasing system protein LolC;protein_id=WP_000284714.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1937130 1937831 . + . ID=gene1904;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=SH03_RS09535;old_locus_tag=SH03_09530 NZ_CP010441.1 Protein Homology CDS 1937130 1937831 . + 0 ID=cds1842;Parent=gene1904;Dbxref=Genbank:WP_001033694.1;Name=WP_001033694.1;Note=outer membrane specific%3B part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins%2C from the inner membrane to the periplasmic chaperone;gbkey=CDS;gene=lolD;product=lipoprotein-releasing system ATP-binding protein LolD;protein_id=WP_001033694.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1937831 1939075 . + . ID=gene1905;Name=SH03_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09540;old_locus_tag=SH03_09535 NZ_CP010441.1 Protein Homology CDS 1937831 1939075 . + 0 ID=cds1843;Parent=gene1905;Dbxref=Genbank:WP_001251348.1;Name=WP_001251348.1;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;gbkey=CDS;product=lipoprotein-releasing system protein LolE;protein_id=WP_001251348.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1939104 1940015 . + . ID=gene1906;Name=SH03_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09545;old_locus_tag=SH03_09540 NZ_CP010441.1 Protein Homology CDS 1939104 1940015 . + 0 ID=cds1844;Parent=gene1906;Dbxref=Genbank:WP_000291270.1;Name=WP_000291270.1;Note=catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine;gbkey=CDS;product=N-acetyl-D-glucosamine kinase;protein_id=WP_000291270.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1940031 1940870 . + . ID=gene1907;Name=SH03_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09550;old_locus_tag=SH03_09545 NZ_CP010441.1 Protein Homology CDS 1940031 1940870 . + 0 ID=cds1845;Parent=gene1907;Dbxref=Genbank:WP_000952737.1;Name=WP_000952737.1;Note=Modulates the activities of several enzymes which are inactive in their acetylated form;gbkey=CDS;product=NAD-dependent deacetylase;protein_id=WP_000952737.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1940990 1941778 . - . ID=gene1908;Name=SH03_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09555;old_locus_tag=SH03_09550 NZ_CP010441.1 Protein Homology CDS 1940990 1941778 . - 0 ID=cds1846;Parent=gene1908;Dbxref=Genbank:WP_000713462.1;Name=WP_000713462.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000713462.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1941775 1942236 . - . ID=gene1909;Name=SH03_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09560;old_locus_tag=SH03_09555 NZ_CP010441.1 Protein Homology CDS 1941775 1942236 . - 0 ID=cds1847;Parent=gene1909;Dbxref=Genbank:WP_000076376.1;Name=WP_000076376.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000076376.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1942294 1943340 . - . ID=gene1910;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=SH03_RS09565;old_locus_tag=SH03_09560 NZ_CP010441.1 Protein Homology CDS 1942294 1943340 . - 0 ID=cds1848;Parent=gene1910;Dbxref=Genbank:WP_000759317.1;Name=WP_000759317.1;Note=can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotD is a periplasmic component that binds the substrate;gbkey=CDS;gene=potD;product=spermidine/putrescine-binding periplasmic protein;protein_id=WP_000759317.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1943337 1944131 . - . ID=gene1911;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=SH03_RS09570;old_locus_tag=SH03_09565 NZ_CP010441.1 Protein Homology CDS 1943337 1944131 . - 0 ID=cds1849;Parent=gene1911;Dbxref=Genbank:WP_000580316.1;Name=WP_000580316.1;Note=can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotC is a membrane component;gbkey=CDS;gene=potC;product=spermidine/putrescine ABC transporter permease;protein_id=WP_000580316.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1944128 1944985 . - . ID=gene1912;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=SH03_RS09575;old_locus_tag=SH03_09570 NZ_CP010441.1 Protein Homology CDS 1944128 1944985 . - 0 ID=cds1850;Parent=gene1912;Dbxref=Genbank:WP_000799401.1;Name=WP_000799401.1;Note=can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotB is a membrane component;gbkey=CDS;gene=potB;product=spermidine/putrescine ABC transporter permease;protein_id=WP_000799401.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1944969 1946105 . - . ID=gene1913;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=SH03_RS09580;old_locus_tag=SH03_09575 NZ_CP010441.1 Protein Homology CDS 1944969 1946105 . - 0 ID=cds1851;Parent=gene1913;Dbxref=Genbank:WP_000531594.1;Name=WP_000531594.1;Note=functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport%3B PotA is the membrane-associated ATPase;gbkey=CDS;gene=potA;product=Fe3+/spermidine/putrescine ABC transporter ATP-binding protein;protein_id=WP_000531594.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1946084 1946299 . - . ID=gene1914;Name=SH03_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09585;old_locus_tag=SH03_09580 NZ_CP010441.1 Protein Homology CDS 1946084 1946299 . - 0 ID=cds1852;Parent=gene1914;Dbxref=Genbank:WP_001299275.1;Name=WP_001299275.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001299275.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1946355 1947581 . + . ID=gene1915;Name=SH03_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09590;old_locus_tag=SH03_09585 NZ_CP010441.1 Protein Homology CDS 1946355 1947581 . + 0 ID=cds1853;Parent=gene1915;Dbxref=Genbank:WP_000359434.1;Name=WP_000359434.1;gbkey=CDS;product=peptidase T;protein_id=WP_000359434.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1947630 1948751 . - . ID=gene1916;Name=SH03_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09595;old_locus_tag=SH03_09590 NZ_CP010441.1 Protein Homology CDS 1947630 1948751 . - 0 ID=cds1854;Parent=gene1916;Dbxref=Genbank:WP_000456506.1;Name=WP_000456506.1;gbkey=CDS;product=50S ribosomal protein L16 arginine hydroxylase;protein_id=WP_000456506.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1948827 1950287 . - . ID=gene1917;Name=SH03_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09600;old_locus_tag=SH03_09595 NZ_CP010441.1 Protein Homology CDS 1948827 1950287 . - 0 ID=cds1855;Parent=gene1917;Dbxref=Genbank:WP_000735412.1;Name=WP_000735412.1;gbkey=CDS;product=sensor protein PhoQ;protein_id=WP_000735412.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1950287 1950958 . - . ID=gene1918;Name=SH03_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09605;old_locus_tag=SH03_09600 NZ_CP010441.1 Protein Homology CDS 1950287 1950958 . - 0 ID=cds1856;Parent=gene1918;Dbxref=Genbank:WP_001265471.1;Name=WP_001265471.1;Note=response regulator in two-component regulatory system with PhoQ%3B involved in magnesium starvation and stress;gbkey=CDS;product=two-component system response regulator;protein_id=WP_001265471.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1951127 1952497 . - . ID=gene1919;Name=SH03_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09610;old_locus_tag=SH03_09605 NZ_CP010441.1 Protein Homology CDS 1951127 1952497 . - 0 ID=cds1857;Parent=gene1919;Dbxref=Genbank:WP_000423742.1;Name=WP_000423742.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;gbkey=CDS;product=adenylosuccinate lyase;protein_id=WP_000423742.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1952501 1953142 . - . ID=gene1920;Name=SH03_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09615;old_locus_tag=SH03_09610 NZ_CP010441.1 Protein Homology CDS 1952501 1953142 . - 0 ID=cds1858;Parent=gene1920;Dbxref=Genbank:WP_001297479.1;Name=WP_001297479.1;Note=HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis;gbkey=CDS;product=lysogenization regulator;protein_id=WP_001297479.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1953178 1954284 . - . ID=gene1921;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=SH03_RS09620;old_locus_tag=SH03_09615 NZ_CP010441.1 Protein Homology CDS 1953178 1954284 . - 0 ID=cds1859;Parent=gene1921;Dbxref=Genbank:WP_001297484.1;Name=WP_001297484.1;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;gbkey=CDS;gene=mnmA;product=tRNA-specific 2-thiouridylase MnmA;protein_id=WP_001297484.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1954338 1954799 . - . ID=gene1922;Name=SH03_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09625;old_locus_tag=SH03_09620 NZ_CP010441.1 Protein Homology CDS 1954338 1954799 . - 0 ID=cds1860;Parent=gene1922;Dbxref=Genbank:WP_000476093.1;Name=WP_000476093.1;gbkey=CDS;product=phosphatase;protein_id=WP_000476093.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1954809 1955462 . - . ID=gene1923;Name=SH03_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09630;old_locus_tag=SH03_09625 NZ_CP010441.1 Protein Homology CDS 1954809 1955462 . - 0 ID=cds1861;Parent=gene1923;Dbxref=Genbank:WP_001248691.1;Name=WP_001248691.1;Note=catalyzes the formation of pseudouridine from uracil-2457 in 23S ribosomal RNA;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase E;protein_id=WP_001248691.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1955634 1956884 . + . ID=gene1924;Name=SH03_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09635;old_locus_tag=SH03_09630 NZ_CP010441.1 Protein Homology CDS 1955634 1956884 . + 0 ID=cds1862;Parent=gene1924;Dbxref=Genbank:WP_000444488.1;Name=WP_000444488.1;Note=Converts isocitrate to alpha ketoglutarate;gbkey=CDS;product=isocitrate dehydrogenase;protein_id=WP_000444488.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1956987 1957310 . - . ID=gene1925;Name=SH03_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09640;old_locus_tag=SH03_09635 NZ_CP010441.1 Protein Homology CDS 1956987 1957310 . - 0 ID=cds1863;Parent=gene1925;Dbxref=Genbank:WP_001295666.1;Name=WP_001295666.1;Note=interacts RssB preventing the degradation of the stress sigma factor RpoS;gbkey=CDS;product=anti-adapter protein IraM;protein_id=WP_001295666.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1957847 1957957 . - . ID=gene1926;Name=SH03_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09645;old_locus_tag=SH03_09640 NZ_CP010441.1 Protein Homology CDS 1957847 1957957 . - 0 ID=cds1864;Parent=gene1926;Dbxref=Genbank:WP_032082692.1;Name=WP_032082692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032082692.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1958010 1958414 . - . ID=gene1927;Name=SH03_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09650;old_locus_tag=SH03_09645 NZ_CP010441.1 Protein Homology CDS 1958010 1958414 . - 0 ID=cds1865;Parent=gene1927;Dbxref=Genbank:WP_000373101.1;Name=WP_000373101.1;gbkey=CDS;product=DUF1398 domain-containing protein;protein_id=WP_000373101.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1958635 1959366 . - . ID=gene1928;Name=SH03_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09655;old_locus_tag=SH03_09650 NZ_CP010441.1 Protein Homology CDS 1958635 1959366 . - 0 ID=cds1866;Parent=gene1928;Dbxref=Genbank:WP_000332303.1;Name=WP_000332303.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000332303.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1959571 1960782 . - . ID=gene1929;Name=SH03_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09660;old_locus_tag=SH03_09655 NZ_CP010441.1 Protein Homology CDS 1959571 1960782 . - 0 ID=cds1867;Parent=gene1929;Dbxref=Genbank:WP_001299269.1;Name=WP_001299269.1;gbkey=CDS;product=blue light- and temperature-regulated antirepressor BluF;protein_id=WP_001299269.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1961096 1961332 . + . ID=gene1930;Name=SH03_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09665;old_locus_tag=SH03_09660 NZ_CP010441.1 Protein Homology CDS 1961096 1961332 . + 0 ID=cds1868;Parent=gene1930;Dbxref=Genbank:WP_000554140.1;Name=WP_000554140.1;gbkey=CDS;product=two-component-system connector protein YcgZ;protein_id=WP_000554140.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1961375 1961647 . + . ID=gene1931;Name=SH03_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09670;old_locus_tag=SH03_09665 NZ_CP010441.1 Protein Homology CDS 1961375 1961647 . + 0 ID=cds1869;Parent=gene1931;Dbxref=Genbank:WP_000858002.1;Name=WP_000858002.1;gbkey=CDS;product=two-component-system connector protein YmgA;protein_id=WP_000858002.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1961676 1961942 . + . ID=gene1932;Name=SH03_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09675;old_locus_tag=SH03_09670 NZ_CP010441.1 Protein Homology CDS 1961676 1961942 . + 0 ID=cds1870;Parent=gene1932;Dbxref=Genbank:WP_000888772.1;Name=WP_000888772.1;gbkey=CDS;product=RcsB connector protein for regulation of biofilm and acid-resistance;protein_id=WP_000888772.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1962055 1962303 . + . ID=gene1933;Name=SH03_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09680;old_locus_tag=SH03_09675 NZ_CP010441.1 Protein Homology CDS 1962055 1962303 . + 0 ID=cds1871;Parent=gene1933;Dbxref=Genbank:WP_001065752.1;Name=WP_001065752.1;gbkey=CDS;product=Blue light%2C low temperature and stress induced protein;protein_id=WP_001065752.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1962635 1964158 . + . ID=gene1934;Name=SH03_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09685;old_locus_tag=SH03_09680 NZ_CP010441.1 Protein Homology CDS 1962635 1964158 . + 0 ID=cds1872;Parent=gene1934;Dbxref=Genbank:WP_001246499.1;Name=WP_001246499.1;gbkey=CDS;product=cyclic-di-GMP phosphodiesterase;protein_id=WP_001246499.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1964290 1964508 . + . ID=gene1935;Name=SH03_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09690;old_locus_tag=SH03_09685 NZ_CP010441.1 Protein Homology CDS 1964290 1964508 . + 0 ID=cds1873;Parent=gene1935;Dbxref=Genbank:WP_001065861.1;Name=WP_001065861.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001065861.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1964513 1964641 . - . ID=gene1936;Name=SH03_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09695;old_locus_tag=SH03_09690 NZ_CP010441.1 Protein Homology CDS 1964513 1964641 . - 0 ID=cds1874;Parent=gene1936;Dbxref=Genbank:WP_001299268.1;Name=WP_001299268.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001299268.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1964908 1967555 . + . ID=gene1937;Name=SH03_RS22870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS22870;pseudo=true NZ_CP010441.1 Protein Homology CDS 1964908 1967555 . + 0 ID=cds1875;Parent=gene1937;exception=annotated by transcript or proteomic data;gbkey=CDS;product=autotransporter;pseudo=true;transl_except=(pos:1966426..1966428%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq gene 1967612 1967941 . - . ID=gene1938;Name=SH03_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09710;old_locus_tag=SH03_09705 NZ_CP010441.1 Protein Homology CDS 1967612 1967941 . - 0 ID=cds1876;Parent=gene1938;Dbxref=Genbank:WP_001295611.1;Name=WP_001295611.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001295611.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1967951 1968295 . - . ID=gene1939;Name=SH03_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09715;old_locus_tag=SH03_09710 NZ_CP010441.1 Protein Homology CDS 1967951 1968295 . - 0 ID=cds1877;Parent=gene1939;Dbxref=Genbank:WP_000726974.1;Name=WP_000726974.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000726974.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1968297 1968470 . - . ID=gene1940;Name=SH03_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09720;old_locus_tag=SH03_09715 NZ_CP010441.1 Protein Homology CDS 1968297 1968470 . - 0 ID=cds1878;Parent=gene1940;Dbxref=Genbank:WP_000122462.1;Name=WP_000122462.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000122462.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 1968871 1969224 . + . ID=id125;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 1968889 1969214 . + . ID=gene1941;Name=SH03_RS09725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS09725;pseudo=true NZ_CP010441.1 Protein Homology CDS 1968889 1969214 . + 0 ID=cds1879;Parent=gene1941;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ATPase;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 1969586 1969852 . - . ID=gene1942;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=SH03_RS09730;old_locus_tag=SH03_09725 NZ_CP010441.1 Protein Homology CDS 1969586 1969852 . - 0 ID=cds1880;Parent=gene1942;Dbxref=Genbank:WP_001185665.1;Name=WP_001185665.1;Note=works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell;gbkey=CDS;gene=minE;product=cell division topological specificity factor;protein_id=WP_001185665.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1969856 1970668 . - . ID=gene1943;Name=SH03_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09735;old_locus_tag=SH03_09730 NZ_CP010441.1 Protein Homology CDS 1969856 1970668 . - 0 ID=cds1881;Parent=gene1943;Dbxref=Genbank:WP_000101055.1;Name=WP_000101055.1;Note=ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums;gbkey=CDS;product=septum site-determining protein MinD;protein_id=WP_000101055.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1970692 1971387 . - . ID=gene1944;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=SH03_RS09740;old_locus_tag=SH03_09735 NZ_CP010441.1 Protein Homology CDS 1970692 1971387 . - 0 ID=cds1882;Parent=gene1944;Dbxref=Genbank:WP_001301105.1;Name=WP_001301105.1;Note=blocks the formation of polar Z-ring septums;gbkey=CDS;gene=minC;product=septum site-determining protein MinC;protein_id=WP_001301105.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1971907 1972275 . + . ID=gene1945;Name=SH03_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09745;old_locus_tag=SH03_09740 NZ_CP010441.1 Protein Homology CDS 1971907 1972275 . + 0 ID=cds1883;Parent=gene1945;Dbxref=Genbank:WP_001056840.1;Name=WP_001056840.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001056840.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1972378 1972779 . - . ID=gene1946;Name=SH03_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09750;old_locus_tag=SH03_09745 NZ_CP010441.1 Protein Homology CDS 1972378 1972779 . - 0 ID=cds1884;Parent=gene1946;Dbxref=Genbank:WP_000695215.1;Name=WP_000695215.1;gbkey=CDS;product=inhibitor of g-type lysozyme;protein_id=WP_000695215.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1972763 1972978 . + . ID=gene1947;Name=SH03_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09755;old_locus_tag=SH03_09750 NZ_CP010441.1 Protein Homology CDS 1972763 1972978 . + 0 ID=cds1885;Parent=gene1947;Dbxref=Genbank:WP_001350504.1;Name=WP_001350504.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001350504.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1972988 1973314 . + . ID=gene1948;Name=SH03_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09760;old_locus_tag=SH03_09755 NZ_CP010441.1 Protein Homology CDS 1972988 1973314 . + 0 ID=cds1886;Parent=gene1948;Dbxref=Genbank:WP_001125720.1;Name=WP_001125720.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001125720.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1973386 1974045 . + . ID=gene1949;Name=SH03_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09765;old_locus_tag=SH03_09760 NZ_CP010441.1 Protein Homology CDS 1973386 1974045 . + 0 ID=cds1887;Parent=gene1949;Dbxref=Genbank:WP_000284280.1;Name=WP_000284280.1;gbkey=CDS;product=isomerase/hydrolase;protein_id=WP_000284280.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1974122 1974583 . + . ID=gene1950;Name=SH03_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09770;old_locus_tag=SH03_09765 NZ_CP010441.1 Protein Homology CDS 1974122 1974583 . + 0 ID=cds1888;Parent=gene1950;Dbxref=Genbank:WP_000807626.1;Name=WP_000807626.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000807626.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1974790 1975701 . - . ID=gene1951;Name=hlyE;gbkey=Gene;gene=hlyE;gene_biotype=protein_coding;locus_tag=SH03_RS09775;old_locus_tag=SH03_09770 NZ_CP010441.1 Protein Homology CDS 1974790 1975701 . - 0 ID=cds1889;Parent=gene1951;Dbxref=Genbank:WP_001336523.1;Name=WP_001336523.1;Note=Acts by forming a pore-like structure upon contact with mammalian cells;gbkey=CDS;gene=hlyE;product=hemolysin E%2C chromosomal;protein_id=WP_001336523.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1976074 1976493 . + . ID=gene1952;Name=SH03_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09780;old_locus_tag=SH03_09775 NZ_CP010441.1 Protein Homology CDS 1976074 1976493 . + 0 ID=cds1890;Parent=gene1952;Dbxref=Genbank:WP_000897378.1;Name=WP_000897378.1;Note=binds with UmuC protein to form functional DNA pol V (UmuD'2UmuC)%3B involved in translesion polymerization;gbkey=CDS;product=protein UmuD;protein_id=WP_000897378.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1976493 1977761 . + . ID=gene1953;Name=SH03_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09785;old_locus_tag=SH03_09780 NZ_CP010441.1 Protein Homology CDS 1976493 1977761 . + 0 ID=cds1891;Parent=gene1953;Dbxref=Genbank:WP_000457616.1;Name=WP_000457616.1;Note=binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC)%3B involved in translesion polymerization;gbkey=CDS;product=protein UmuC;protein_id=WP_000457616.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1977807 1978337 . - . ID=gene1954;Name=SH03_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09790;old_locus_tag=SH03_09785 NZ_CP010441.1 Protein Homology CDS 1977807 1978337 . - 0 ID=cds1892;Parent=gene1954;Dbxref=Genbank:WP_000943459.1;Name=WP_000943459.1;Note=disulfide oxidoreductase%3B integral membrane protein%3B required for perioplasmic disulfide bond formation%3B oxidizes DsbA protein;gbkey=CDS;product=disulfide bond formation protein B;protein_id=WP_000943459.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1978483 1980024 . - . ID=gene1955;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=SH03_RS09795;old_locus_tag=SH03_09790 NZ_CP010441.1 Protein Homology CDS 1978483 1980024 . - 0 ID=cds1893;Parent=gene1955;Dbxref=Genbank:WP_000406391.1;Name=WP_000406391.1;Note=involved in regulation of intracellular pH under alkaline conditions;gbkey=CDS;gene=nhaB;product=Na+/H+ antiporter NhaB;protein_id=WP_000406391.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1980245 1980964 . + . ID=gene1956;Name=SH03_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09800;old_locus_tag=SH03_09795 NZ_CP010441.1 Protein Homology CDS 1980245 1980964 . + 0 ID=cds1894;Parent=gene1956;Dbxref=Genbank:WP_000234823.1;Name=WP_000234823.1;Note=Multifunctional regulator of fatty acid metabolism;gbkey=CDS;product=fatty acid metabolism regulator protein;protein_id=WP_000234823.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1981016 1982548 . - . ID=gene1957;Name=SH03_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09805;old_locus_tag=SH03_09800 NZ_CP010441.1 Protein Homology CDS 1981016 1982548 . - 0 ID=cds1895;Parent=gene1957;Dbxref=Genbank:WP_000190854.1;Name=WP_000190854.1;gbkey=CDS;product=SpoVR family stationary phase;protein_id=WP_000190854.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1982878 1984176 . + . ID=gene1958;Name=SH03_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09810;old_locus_tag=SH03_09805 NZ_CP010441.1 Protein Homology CDS 1982878 1984176 . + 0 ID=cds1896;Parent=gene1958;Dbxref=Genbank:WP_001266908.1;Name=WP_001266908.1;Note=catalyzes the oxidative deamination of D-amino acids;gbkey=CDS;product=D-amino acid dehydrogenase;protein_id=WP_001266908.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1984186 1985256 . + . ID=gene1959;Name=SH03_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09815;old_locus_tag=SH03_09810 NZ_CP010441.1 Protein Homology CDS 1984186 1985256 . + 0 ID=cds1897;Parent=gene1959;Dbxref=Genbank:WP_000197881.1;Name=WP_000197881.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;product=alanine racemase catabolic;protein_id=WP_000197881.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1985642 1987378 . - . ID=gene1960;Name=cvrA;gbkey=Gene;gene=cvrA;gene_biotype=protein_coding;gene_synonym=nhaP2,ycgO;locus_tag=SH03_RS09820;old_locus_tag=SH03_09815 NZ_CP010441.1 Protein Homology CDS 1985642 1987378 . - 0 ID=cds1898;Parent=gene1960;Dbxref=Genbank:WP_000340194.1;Name=WP_000340194.1;Note=the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter%3B can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli;gbkey=CDS;gene=cvrA;product=K+/H+ antiporter NhaP2;protein_id=WP_000340194.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1987473 1988387 . - . ID=gene1961;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=SH03_RS09825;old_locus_tag=SH03_09820 NZ_CP010441.1 Protein Homology CDS 1987473 1988387 . - 0 ID=cds1899;Parent=gene1961;Dbxref=Genbank:WP_000051560.1;Name=WP_000051560.1;Note=catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine;gbkey=CDS;gene=ldcA;product=murein tetrapeptide carboxypeptidase;protein_id=WP_000051560.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1988487 1989098 . + . ID=gene1962;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=SH03_RS09830;old_locus_tag=SH03_09825 NZ_CP010441.1 Protein Homology CDS 1988487 1989098 . + 0 ID=cds1900;Parent=gene1962;Dbxref=Genbank:WP_001301104.1;Name=WP_001301104.1;Note=catalyzes the cleavage of 1-4 beta-glycoside linkaged between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan;gbkey=CDS;gene=emtA;product=murein transglycosylase;protein_id=WP_001301104.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1989100 1989834 . - . ID=gene1963;Name=SH03_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09835;old_locus_tag=SH03_09830 NZ_CP010441.1 Protein Homology CDS 1989100 1989834 . - 0 ID=cds1901;Parent=gene1963;Dbxref=Genbank:WP_000020169.1;Name=WP_000020169.1;gbkey=CDS;product=flagellar brake protein YcgR;protein_id=WP_000020169.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1990035 1990289 . + . ID=gene1964;Name=SH03_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09840;old_locus_tag=SH03_09835 NZ_CP010441.1 Protein Homology CDS 1990035 1990289 . + 0 ID=cds1902;Parent=gene1964;Dbxref=Genbank:WP_001310727.1;Name=WP_001310727.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001310727.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1990467 1990907 . + . ID=gene1965;Name=SH03_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09845;old_locus_tag=SH03_09840 NZ_CP010441.1 Protein Homology CDS 1990467 1990907 . + 0 ID=cds1903;Parent=gene1965;Dbxref=Genbank:WP_000615067.1;Name=WP_000615067.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000615067.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1990986 1992683 . - . ID=gene1966;Name=treA;gbkey=Gene;gene=treA;gene_biotype=protein_coding;locus_tag=SH03_RS09850;old_locus_tag=SH03_09845 NZ_CP010441.1 Protein Homology CDS 1990986 1992683 . - 0 ID=cds1904;Parent=gene1966;Dbxref=Genbank:WP_000841714.1;Name=WP_000841714.1;Note=periplasmic%3B catalyzes the hydrolysis of trehalose to glucose which can then be imported into the cell;gbkey=CDS;gene=treA;product=periplasmic trehalase;protein_id=WP_000841714.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1993003 1994421 . - . ID=gene1967;Name=SH03_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09855;old_locus_tag=SH03_09850 NZ_CP010441.1 Protein Homology CDS 1993003 1994421 . - 0 ID=cds1905;Parent=gene1967;Dbxref=Genbank:WP_001301101.1;Name=WP_001301101.1;Note=phosphotransferaese subunit%3B phosphorylates dihydroxyacetone along with DhaK/DhaL;gbkey=CDS;product=dihydroxyacetone kinase subunit DhaM;protein_id=WP_001301101.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1994432 1995064 . - . ID=gene1968;Name=SH03_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09860;old_locus_tag=SH03_09855 NZ_CP010441.1 Protein Homology CDS 1994432 1995064 . - 0 ID=cds1906;Parent=gene1968;Dbxref=Genbank:WP_000059411.1;Name=WP_000059411.1;Note=with DhaK and DhaM catalyzes the phosphorylation of dihydroxyacetone;gbkey=CDS;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_000059411.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1995075 1996145 . - . ID=gene1969;Name=SH03_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09865;old_locus_tag=SH03_09860 NZ_CP010441.1 Protein Homology CDS 1995075 1996145 . - 0 ID=cds1907;Parent=gene1969;Dbxref=Genbank:WP_000733715.1;Name=WP_000733715.1;Note=with DhaL and DhaM forms dihydroxyacetone kinase%2C which is responsible for phosphorylating dihydroxyacetone%3B DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase;gbkey=CDS;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_000733715.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1996373 1998292 . + . ID=gene1970;Name=SH03_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09870;old_locus_tag=SH03_09865 NZ_CP010441.1 Protein Homology CDS 1996373 1998292 . + 0 ID=cds1908;Parent=gene1970;Dbxref=Genbank:WP_001350505.1;Name=WP_001350505.1;Note=Positively regulates the dhaKLM operon from a sigma-70 promoter;gbkey=CDS;product=dihydroxyacetone kinase subunit DhaR;protein_id=WP_001350505.1;transl_table=11 NZ_CP010441.1 RefSeq gene 1998392 2001259 . - . ID=gene1971;Name=SH03_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09875;old_locus_tag=SH03_09870 NZ_CP010441.1 Protein Homology CDS 1998392 2001259 . - 0 ID=cds1909;Parent=gene1971;Dbxref=Genbank:WP_001334788.1;Name=WP_001334788.1;gbkey=CDS;product=adhesin;protein_id=WP_001334788.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2001604 2001783 . + . ID=gene1972;Name=SH03_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09880;old_locus_tag=SH03_09875 NZ_CP010441.1 Protein Homology CDS 2001604 2001783 . + 0 ID=cds1910;Parent=gene1972;Dbxref=Genbank:WP_000280737.1;Name=WP_000280737.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000280737.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2002028 2003119 . - . ID=gene1973;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=SH03_RS09885;old_locus_tag=SH03_09880 NZ_CP010441.1 Protein Homology CDS 2002028 2003119 . - 0 ID=cds1911;Parent=gene1973;Dbxref=Genbank:WP_000505866.1;Name=WP_000505866.1;Note=EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;gbkey=CDS;gene=ychF;product=ribosome-binding ATPase YchF;protein_id=WP_000505866.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2003236 2003820 . - . ID=gene1974;Name=SH03_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09890;old_locus_tag=SH03_09885 NZ_CP010441.1 Protein Homology CDS 2003236 2003820 . - 0 ID=cds1912;Parent=gene1974;Dbxref=Genbank:WP_000152933.1;Name=WP_000152933.1;gbkey=CDS;product=peptidyl-tRNA hydrolase;protein_id=WP_000152933.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2004098 2004376 . + . ID=gene1975;Name=SH03_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09895;old_locus_tag=SH03_09890 NZ_CP010441.1 Protein Homology CDS 2004098 2004376 . + 0 ID=cds1913;Parent=gene1975;Dbxref=Genbank:WP_000823885.1;Name=WP_000823885.1;Note=YchH%3B transcription activated by CRP (cyclic AMP receptor protein)%2C a global transcription factor involved in regulation of metabolism in enteric bacteria%3B ychH presents a class II promoter to bind CRP%3B unknown function;gbkey=CDS;product=membrane protein;protein_id=WP_000823885.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2004431 2006083 . - . ID=gene1976;Name=SH03_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09900;old_locus_tag=SH03_09895 NZ_CP010441.1 Protein Homology CDS 2004431 2006083 . - 0 ID=cds1914;Parent=gene1976;Dbxref=Genbank:WP_001300632.1;Name=WP_001300632.1;Note=role in sulfate transport across the inner membrane%3B member of the SulP family of sulfate transporters%3B seems to mediate transport via sulfate/proton symport;gbkey=CDS;product=transporter;protein_id=WP_001300632.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2006235 2007182 . - . ID=gene1977;Name=SH03_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09905;old_locus_tag=SH03_09900 NZ_CP010441.1 Protein Homology CDS 2006235 2007182 . - 0 ID=cds1915;Parent=gene1977;Dbxref=Genbank:WP_001298109.1;Name=WP_001298109.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;product=ribose-phosphate pyrophosphokinase;protein_id=WP_001298109.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2007333 2008184 . - . ID=gene1978;Name=SH03_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09910;old_locus_tag=SH03_09905 NZ_CP010441.1 Protein Homology CDS 2007333 2008184 . - 0 ID=cds1916;Parent=gene1978;Dbxref=Genbank:WP_001260332.1;Name=WP_001260332.1;gbkey=CDS;product=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;protein_id=WP_001260332.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2008184 2008807 . - . ID=gene1979;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=SH03_RS09915;old_locus_tag=SH03_09910 NZ_CP010441.1 Protein Homology CDS 2008184 2008807 . - 0 ID=cds1917;Parent=gene1979;Dbxref=Genbank:WP_001130692.1;Name=WP_001130692.1;Note=Incorporates lipoproteins in the outer membrane after they are released by the LolA protein;gbkey=CDS;gene=lolB;product=outer membrane lipoprotein LolB;protein_id=WP_001130692.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2009021 2010277 . + . ID=gene1980;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=SH03_RS09920;old_locus_tag=SH03_09915 NZ_CP010441.1 Protein Homology CDS 2009021 2010277 . + 0 ID=cds1918;Parent=gene1980;Dbxref=Genbank:WP_001299679.1;Name=WP_001299679.1;Note=catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin (tetrapyrroles) biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins;gbkey=CDS;gene=hemA;product=glutamyl-tRNA reductase;protein_id=WP_001299679.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2010319 2011401 . + . ID=gene1981;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=SH03_RS09925;old_locus_tag=SH03_09920 NZ_CP010441.1 Protein Homology CDS 2010319 2011401 . + 0 ID=cds1919;Parent=gene1981;Dbxref=Genbank:WP_000804726.1;Name=WP_000804726.1;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;gbkey=CDS;gene=prfA;product=peptide chain release factor 1;protein_id=WP_000804726.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2011401 2012234 . + . ID=gene1982;Name=SH03_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09930;old_locus_tag=SH03_09925 NZ_CP010441.1 Protein Homology CDS 2011401 2012234 . + 0 ID=cds1920;Parent=gene1982;Dbxref=Genbank:WP_000456467.1;Name=WP_000456467.1;Note=HemK%3B PrmC%3B transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB;gbkey=CDS;product=release factor glutamine methyltransferase;protein_id=WP_000456467.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2012231 2012623 . + . ID=gene1983;Name=SH03_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09935;old_locus_tag=SH03_09930 NZ_CP010441.1 Protein Homology CDS 2012231 2012623 . + 0 ID=cds1921;Parent=gene1983;Dbxref=Genbank:WP_000200374.1;Name=WP_000200374.1;gbkey=CDS;product=protein sirB2;protein_id=WP_000200374.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2012627 2013436 . + . ID=gene1984;Name=SH03_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09940;old_locus_tag=SH03_09935 NZ_CP010441.1 Protein Homology CDS 2012627 2013436 . + 0 ID=cds1922;Parent=gene1984;Dbxref=Genbank:WP_001257044.1;Name=WP_001257044.1;gbkey=CDS;product=protein sirB1;protein_id=WP_001257044.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2013472 2014326 . + . ID=gene1985;Name=SH03_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09945;old_locus_tag=SH03_09940 NZ_CP010441.1 Protein Homology CDS 2013472 2014326 . + 0 ID=cds1923;Parent=gene1985;Dbxref=Genbank:WP_000811065.1;Name=WP_000811065.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis;gbkey=CDS;product=2-dehydro-3-deoxyphosphooctonate aldolase;protein_id=WP_000811065.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 2014392 2014852 . + . ID=id126;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 2014475 2014609 . - . ID=gene1986;Name=SH03_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09950;old_locus_tag=SH03_09945 NZ_CP010441.1 Protein Homology CDS 2014475 2014609 . - 0 ID=cds1924;Parent=gene1986;Dbxref=Genbank:WP_000950183.1;Name=WP_000950183.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000950183.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 2014927 2015386 . + . ID=id127;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 2015010 2015144 . - . ID=gene1987;Name=SH03_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09955;old_locus_tag=SH03_09950 NZ_CP010441.1 Protein Homology CDS 2015010 2015144 . - 0 ID=cds1925;Parent=gene1987;Dbxref=Genbank:WP_000950182.1;Name=WP_000950182.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000950182.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2015521 2016621 . - . ID=gene1988;Name=SH03_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09960;old_locus_tag=SH03_09955 NZ_CP010441.1 Protein Homology CDS 2015521 2016621 . - 0 ID=cds1926;Parent=gene1988;Dbxref=Genbank:WP_000063607.1;Name=WP_000063607.1;gbkey=CDS;product=sodium/proton antiporter ChaA;protein_id=WP_000063607.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2016891 2017121 . + . ID=gene1989;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=SH03_RS09965;old_locus_tag=SH03_09960 NZ_CP010441.1 Protein Homology CDS 2016891 2017121 . + 0 ID=cds1927;Parent=gene1989;Dbxref=Genbank:WP_001146444.1;Name=WP_001146444.1;Note=in Escherichia coli this protein putatively regulates the sodium/proton (also pH-independent calcium/proton) antiporter chaA%3B has weak affinity for calcium and magnesium ions;gbkey=CDS;gene=chaB;product=cation transport regulator ChaB;protein_id=WP_001146444.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2017279 2017974 . + . ID=gene1990;Name=SH03_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09970;old_locus_tag=SH03_09965 NZ_CP010441.1 Protein Homology CDS 2017279 2017974 . + 0 ID=cds1928;Parent=gene1990;Dbxref=Genbank:WP_001336325.1;Name=WP_001336325.1;gbkey=CDS;product=glutathione-specific gamma-glutamylcyclotransferase;protein_id=WP_001336325.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2018018 2018371 . - . ID=gene1991;Name=SH03_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09975;old_locus_tag=SH03_09970 NZ_CP010441.1 Protein Homology CDS 2018018 2018371 . - 0 ID=cds1929;Parent=gene1991;Dbxref=Genbank:WP_001169669.1;Name=WP_001169669.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001169669.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2018556 2019950 . + . ID=gene1992;Name=SH03_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09980;old_locus_tag=SH03_09975 NZ_CP010441.1 Protein Homology CDS 2018556 2019950 . + 0 ID=cds1930;Parent=gene1992;Dbxref=Genbank:WP_000086217.1;Name=WP_000086217.1;gbkey=CDS;product=invasin;protein_id=WP_000086217.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2019951 2020601 . - . ID=gene1993;Name=SH03_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09985;old_locus_tag=SH03_09980 NZ_CP010441.1 Protein Homology CDS 2019951 2020601 . - 0 ID=cds1931;Parent=gene1993;Dbxref=Genbank:WP_000070491.1;Name=WP_000070491.1;Note=two-component response regulator NarL%3B phosphorylated by NarQ%3B activates transcription of nitrate and nitrite reductase genes and represses transcription of fumarate reductase;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000070491.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2020594 2022390 . - . ID=gene1994;Name=SH03_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09990;old_locus_tag=SH03_09985 NZ_CP010441.1 Protein Homology CDS 2020594 2022390 . - 0 ID=cds1932;Parent=gene1994;Dbxref=Genbank:WP_000918073.1;Name=WP_000918073.1;gbkey=CDS;product=nitrate/nitrite two-component system sensor histidine kinase;protein_id=WP_000918073.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2022416 2022634 . + . ID=gene1995;Name=SH03_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS09995;old_locus_tag=SH03_09990 NZ_CP010441.1 Protein Homology CDS 2022416 2022634 . + 0 ID=cds1933;Parent=gene1995;Dbxref=Genbank:WP_000069500.1;Name=WP_000069500.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000069500.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2022729 2024120 . + . ID=gene1996;Name=SH03_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10000;old_locus_tag=SH03_09995 NZ_CP010441.1 Protein Homology CDS 2022729 2024120 . + 0 ID=cds1934;Parent=gene1996;Dbxref=Genbank:WP_000019827.1;Name=WP_000019827.1;Note=involved in the transport of nitrate and nitrite;gbkey=CDS;product=nitrate/nitrite transporter NarK;protein_id=WP_000019827.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2024636 2028379 . + . ID=gene1997;Name=narZ;gbkey=Gene;gene=narZ;gene_biotype=protein_coding;locus_tag=SH03_RS10005;old_locus_tag=SH03_10000 NZ_CP010441.1 Protein Homology CDS 2024636 2028379 . + 0 ID=cds1935;Parent=gene1997;Dbxref=Genbank:WP_000032939.1;Name=WP_000032939.1;Note=with NarYV catalyzes the reduction of nitrate%3B the beta subunit is an iron sulfur cluster containing electron transfer subunit%3B one of 3 nitrate reductases in E. coli%3B expression of nitrate reductase Z is not dependent on nitrate levels;gbkey=CDS;gene=narZ;product=respiratory nitrate reductase 1 alpha chain;protein_id=WP_000032939.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2028376 2029914 . + . ID=gene1998;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=SH03_RS10010;old_locus_tag=SH03_10005 NZ_CP010441.1 Protein Homology CDS 2028376 2029914 . + 0 ID=cds1936;Parent=gene1998;Dbxref=Genbank:WP_000702650.1;Name=WP_000702650.1;Note=with NarGJI catalyzes the reduction of nitrate%3B the beta subunit is an iron sulfur cluster containing electron transfer subunit%3B one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high;gbkey=CDS;gene=narH;product=nitrate reductase subunit beta;protein_id=WP_000702650.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2029911 2030621 . + . ID=gene1999;Name=SH03_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10015;old_locus_tag=SH03_10010 NZ_CP010441.1 Protein Homology CDS 2029911 2030621 . + 0 ID=cds1937;Parent=gene1999;Dbxref=Genbank:WP_000571681.1;Name=WP_000571681.1;Note=delta subunit of nitrate reductase 1%3B chaperone for the insertion of the molybdenum cofactor and assembly of nitrate reductase 1;gbkey=CDS;product=nitrate reductase molybdenum cofactor assembly chaperone NarJ;protein_id=WP_000571681.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2030621 2031298 . + . ID=gene2000;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=SH03_RS10020;old_locus_tag=SH03_10015 NZ_CP010441.1 Protein Homology CDS 2030621 2031298 . + 0 ID=cds1938;Parent=gene2000;Dbxref=Genbank:WP_001160108.1;Name=WP_001160108.1;Note=with NarGJH catalyzes the reduction of nitrate%3B the gamma subunit localizes NarGHI to the membrane%3B one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high;gbkey=CDS;gene=narI;product=respiratory nitrate reductase subunit gamma;protein_id=WP_001160108.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 2031480 2032034 . + . ID=id128;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 2031481 2031756 . + . ID=gene2001;Name=SH03_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10025;old_locus_tag=SH03_10020 NZ_CP010441.1 Protein Homology CDS 2031481 2031756 . + 0 ID=cds1939;Parent=gene2001;Dbxref=Genbank:WP_000260154.1;Name=WP_000260154.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000260154.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2032016 2032100 . - . ID=gene2002;Name=SH03_RS10030;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS10030;old_locus_tag=SH03_10025 NZ_CP010441.1 tRNAscan-SE tRNA 2032016 2032100 . - . ID=rna62;Parent=gene2002;anticodon=(pos:complement(2032064..2032066));gbkey=tRNA;product=tRNA-Tyr NZ_CP010441.1 tRNAscan-SE exon 2032016 2032100 . - . ID=id129;Parent=rna62;anticodon=(pos:complement(2032064..2032066));gbkey=tRNA;product=tRNA-Tyr NZ_CP010441.1 RefSeq gene 2032310 2032394 . - . ID=gene2003;Name=SH03_RS10035;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS10035;old_locus_tag=SH03_10030 NZ_CP010441.1 tRNAscan-SE tRNA 2032310 2032394 . - . ID=rna63;Parent=gene2003;anticodon=(pos:complement(2032358..2032360));gbkey=tRNA;product=tRNA-Tyr NZ_CP010441.1 tRNAscan-SE exon 2032310 2032394 . - . ID=id130;Parent=rna63;anticodon=(pos:complement(2032358..2032360));gbkey=tRNA;product=tRNA-Tyr NZ_CP010441.1 RefSeq gene 2032554 2033396 . - . ID=gene2004;Name=SH03_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10040;old_locus_tag=SH03_10035 NZ_CP010441.1 Protein Homology CDS 2032554 2033396 . - 0 ID=cds1940;Parent=gene2004;Dbxref=Genbank:WP_000555857.1;Name=WP_000555857.1;gbkey=CDS;product=formyltetrahydrofolate deformylase;protein_id=WP_000555857.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2033446 2033904 . - . ID=gene2005;Name=SH03_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10045;old_locus_tag=SH03_10040 NZ_CP010441.1 Protein Homology CDS 2033446 2033904 . - 0 ID=cds1941;Parent=gene2005;Dbxref=Genbank:WP_001307143.1;Name=WP_001307143.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001307143.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2034017 2034922 . + . ID=gene2006;Name=SH03_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10050;old_locus_tag=SH03_10045 NZ_CP010441.1 Protein Homology CDS 2034017 2034922 . + 0 ID=cds1942;Parent=gene2006;Dbxref=Genbank:WP_001295622.1;Name=WP_001295622.1;gbkey=CDS;product=NTE family protein RssA;protein_id=WP_001295622.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2035014 2036027 . + . ID=gene2007;Name=SH03_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10055;old_locus_tag=SH03_10050 NZ_CP010441.1 Protein Homology CDS 2035014 2036027 . + 0 ID=cds1943;Parent=gene2007;Dbxref=Genbank:WP_000193447.1;Name=WP_000193447.1;gbkey=CDS;product=regulator of RpoS;protein_id=WP_000193447.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2036229 2037137 . + . ID=gene2008;Name=SH03_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10060;old_locus_tag=SH03_10055 NZ_CP010441.1 Protein Homology CDS 2036229 2037137 . + 0 ID=cds1944;Parent=gene2008;Dbxref=Genbank:WP_000718995.1;Name=WP_000718995.1;Note=together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase%2C an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate%3B regulates cellular levels of UDP-glucose;gbkey=CDS;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_000718995.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2037281 2037694 . - . ID=gene2009;Name=SH03_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10065;old_locus_tag=SH03_10060 NZ_CP010441.1 Protein Homology CDS 2037281 2037694 . - 0 ID=cds1945;Parent=gene2009;Dbxref=Genbank:WP_001287378.1;Name=WP_001287378.1;gbkey=CDS;product=DNA-binding protein H-NS;protein_id=WP_001287378.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2038299 2038916 . + . ID=gene2010;Name=SH03_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10070;old_locus_tag=SH03_10065 NZ_CP010441.1 Protein Homology CDS 2038299 2038916 . + 0 ID=cds1946;Parent=gene2010;Dbxref=Genbank:WP_000068077.1;Name=WP_000068077.1;Note=catalyzes the formation of thymidine 5'-phosphate from thymidine;gbkey=CDS;product=thymidine kinase;protein_id=WP_000068077.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2039198 2039788 . - . ID=gene2011;Name=SH03_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10075;old_locus_tag=SH03_10070 NZ_CP010441.1 Protein Homology CDS 2039198 2039788 . - 0 ID=cds1947;Parent=gene2011;Dbxref=Genbank:WP_001326299.1;Name=WP_001326299.1;gbkey=CDS;product=transposase;protein_id=WP_001326299.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2039733 2040049 . - . ID=gene2012;Name=SH03_RS10080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS10080;pseudo=true NZ_CP010441.1 Protein Homology CDS 2039733 2040049 . - 0 ID=cds1948;Parent=gene2012;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(2039909..2039911)%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq gene 2040218 2042893 . - . ID=gene2013;Name=SH03_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10085;old_locus_tag=SH03_10080 NZ_CP010441.1 Protein Homology CDS 2040218 2042893 . - 0 ID=cds1949;Parent=gene2013;Dbxref=Genbank:WP_000301651.1;Name=WP_000301651.1;gbkey=CDS;product=aldehyde-alcohol dehydrogenase;protein_id=WP_000301651.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2043370 2044017 . + . ID=gene2014;Name=SH03_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10090;old_locus_tag=SH03_10085 NZ_CP010441.1 Protein Homology CDS 2043370 2044017 . + 0 ID=cds1950;Parent=gene2014;Dbxref=Genbank:WP_000616554.1;Name=WP_000616554.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000616554.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2044755 2046386 . + . ID=gene2015;Name=SH03_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10095;old_locus_tag=SH03_10090 NZ_CP010441.1 Protein Homology CDS 2044755 2046386 . + 0 ID=cds1951;Parent=gene2015;Dbxref=Genbank:WP_001407612.1;Name=WP_001407612.1;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_001407612.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2046472 2047392 . + . ID=gene2016;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=SH03_RS10100;old_locus_tag=SH03_10095 NZ_CP010441.1 Protein Homology CDS 2046472 2047392 . + 0 ID=cds1952;Parent=gene2016;Dbxref=Genbank:WP_000911112.1;Name=WP_000911112.1;gbkey=CDS;gene=oppB;product=peptide ABC transporter permease;protein_id=WP_000911112.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2047407 2048315 . + . ID=gene2017;Name=SH03_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10105;old_locus_tag=SH03_10100 NZ_CP010441.1 Protein Homology CDS 2047407 2048315 . + 0 ID=cds1953;Parent=gene2017;Dbxref=Genbank:WP_000979661.1;Name=WP_000979661.1;Note=with OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_000979661.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2048327 2049340 . + . ID=gene2018;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=SH03_RS10110;old_locus_tag=SH03_10105 NZ_CP010441.1 Protein Homology CDS 2048327 2049340 . + 0 ID=cds1954;Parent=gene2018;Dbxref=Genbank:WP_000110948.1;Name=WP_000110948.1;gbkey=CDS;gene=oppD;product=oligopeptide transport ATP-binding protein OppD;protein_id=WP_000110948.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2049337 2050341 . + . ID=gene2019;Name=SH03_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10115;old_locus_tag=SH03_10110 NZ_CP010441.1 Protein Homology CDS 2049337 2050341 . + 0 ID=cds1955;Parent=gene2019;Dbxref=Genbank:WP_000994905.1;Name=WP_000994905.1;Note=with OppABCD is involved in the transport of oligopeptides%3B OppF and OppD are ATP-binding proteins;gbkey=CDS;product=oligopeptide transport ATP-binding protein OppF;protein_id=WP_000994905.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2050394 2050723 . - . ID=gene2020;Name=SH03_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10120;old_locus_tag=SH03_10115 NZ_CP010441.1 Protein Homology CDS 2050394 2050723 . - 0 ID=cds1956;Parent=gene2020;Dbxref=Genbank:WP_000366959.1;Name=WP_000366959.1;Note=highly acidic protein%3B the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi)%3B binds heat-unstable protein (HU-alpha) which is a histone-like protein;gbkey=CDS;product=hypothetical protein;protein_id=WP_000366959.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2050758 2052218 . - . ID=gene2021;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=SH03_RS10125;old_locus_tag=SH03_10120 NZ_CP010441.1 Protein Homology CDS 2050758 2052218 . - 0 ID=cds1957;Parent=gene2021;Dbxref=Genbank:WP_000214516.1;Name=WP_000214516.1;Note=catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol);gbkey=CDS;gene=cls;product=cardiolipin synthase;protein_id=WP_000214516.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2052250 2052534 . + . ID=gene2022;Name=SH03_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10130;old_locus_tag=SH03_10125 NZ_CP010441.1 Protein Homology CDS 2052250 2052534 . + 0 ID=cds1958;Parent=gene2022;Dbxref=Genbank:WP_001303937.1;Name=WP_001303937.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001303937.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2052589 2053842 . - . ID=gene2023;Name=SH03_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10135;old_locus_tag=SH03_10130 NZ_CP010441.1 Protein Homology CDS 2052589 2053842 . - 0 ID=cds1959;Parent=gene2023;Dbxref=Genbank:WP_001295624.1;Name=WP_001295624.1;gbkey=CDS;product=voltage-gated potassium channel Kch;protein_id=WP_001295624.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2054142 2054438 . - . ID=gene2024;Name=SH03_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10140;old_locus_tag=SH03_10135 NZ_CP010441.1 Protein Homology CDS 2054142 2054438 . - 0 ID=cds1960;Parent=gene2024;Dbxref=Genbank:WP_000967595.1;Name=WP_000967595.1;Note=unknown function%3B YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase%2C but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity;gbkey=CDS;product=hypothetical protein;protein_id=WP_000967595.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2054662 2055381 . + . ID=gene2025;Name=SH03_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10145;old_locus_tag=SH03_10140 NZ_CP010441.1 Protein Homology CDS 2054662 2055381 . + 0 ID=cds1961;Parent=gene2025;Dbxref=Genbank:WP_001360141.1;Name=WP_001360141.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B transduces proton motive force of the cytoplasmic membrane to outer membrane transporters%3B involved in the transport of ron-siderophore complexes%2C vitamin B12 and colicins;gbkey=CDS;product=protein TonB;protein_id=WP_001360141.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2055421 2055819 . - . ID=gene2026;Name=SH03_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10150;old_locus_tag=SH03_10145 NZ_CP010441.1 Protein Homology CDS 2055421 2055819 . - 0 ID=cds1962;Parent=gene2026;Dbxref=Genbank:WP_000108160.1;Name=WP_000108160.1;gbkey=CDS;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000108160.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2055924 2056463 . - . ID=gene2027;Name=SH03_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10155;old_locus_tag=SH03_10150 NZ_CP010441.1 Protein Homology CDS 2055924 2056463 . - 0 ID=cds1963;Parent=gene2027;Dbxref=Genbank:WP_000808667.1;Name=WP_000808667.1;Note=Involved in cell division%3B probably involved in intracellular septation;gbkey=CDS;product=intracellular septation protein A;protein_id=WP_000808667.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2056493 2057236 . - . ID=gene2028;Name=SH03_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10160;old_locus_tag=SH03_10155 NZ_CP010441.1 Protein Homology CDS 2056493 2057236 . - 0 ID=cds1964;Parent=gene2028;Dbxref=Genbank:WP_000028545.1;Name=WP_000028545.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000028545.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2057593 2058231 . + . ID=gene2029;Name=SH03_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10165;old_locus_tag=SH03_10160 NZ_CP010441.1 Protein Homology CDS 2057593 2058231 . + 0 ID=cds1965;Parent=gene2029;Dbxref=Genbank:WP_000737226.1;Name=WP_000737226.1;Note=receptor for colicin S4;gbkey=CDS;product=outer membrane protein W;protein_id=WP_000737226.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2058291 2058797 . - . ID=gene2030;Name=SH03_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10170;old_locus_tag=SH03_10165 NZ_CP010441.1 Protein Homology CDS 2058291 2058797 . - 0 ID=cds1966;Parent=gene2030;Dbxref=Genbank:WP_001079505.1;Name=WP_001079505.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001079505.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2058843 2059343 . - . ID=gene2031;Name=SH03_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10175;old_locus_tag=SH03_10170 NZ_CP010441.1 Protein Homology CDS 2058843 2059343 . - 0 ID=cds1967;Parent=gene2031;Dbxref=Genbank:WP_001056490.1;Name=WP_001056490.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001056490.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2059429 2059608 . - . ID=gene2032;Name=SH03_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10180;old_locus_tag=SH03_10175 NZ_CP010441.1 Protein Homology CDS 2059429 2059608 . - 0 ID=cds1968;Parent=gene2032;Dbxref=Genbank:WP_000807651.1;Name=WP_000807651.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000807651.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2059989 2060795 . - . ID=gene2033;Name=SH03_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10185;old_locus_tag=SH03_10180 NZ_CP010441.1 Protein Homology CDS 2059989 2060795 . - 0 ID=cds1969;Parent=gene2033;Dbxref=Genbank:WP_000443067.1;Name=WP_000443067.1;gbkey=CDS;product=tryptophan synthase subunit alpha;protein_id=WP_000443067.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2060795 2061988 . - . ID=gene2034;Name=SH03_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10190;old_locus_tag=SH03_10185 NZ_CP010441.1 Protein Homology CDS 2060795 2061988 . - 0 ID=cds1970;Parent=gene2034;Dbxref=Genbank:WP_000209520.1;Name=WP_000209520.1;Note=catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate;gbkey=CDS;product=tryptophan synthase subunit beta;protein_id=WP_000209520.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2062000 2063358 . - . ID=gene2035;Name=SH03_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10195;old_locus_tag=SH03_10190 NZ_CP010441.1 Protein Homology CDS 2062000 2063358 . - 0 ID=cds1971;Parent=gene2035;Dbxref=Genbank:WP_001340286.1;Name=WP_001340286.1;Note=monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate;gbkey=CDS;product=phosphoribosylanthranilate isomerase;protein_id=WP_001340286.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2063362 2064957 . - . ID=gene2036;Name=SH03_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10200;old_locus_tag=SH03_10195 NZ_CP010441.1 Protein Homology CDS 2063362 2064957 . - 0 ID=cds1972;Parent=gene2036;Dbxref=Genbank:WP_000763511.1;Name=WP_000763511.1;Note=bifunctional anthranilate synthase II/anthranilate phosphoribosyltransferase%3B TrpD%3B forms a heterotetramer with Trp E and the complex catalyzes the formation of anthranilate from chorismate and glutamine%3B also catalyzes the formation of N-(5-phospho-D-ribosyl)-anthranilate from athranilate and 5-phospho-alpha-D-ribose 1-diphosphate%3B functions in tryptophan biosynthesis;gbkey=CDS;product=bifunctional protein TrpGD;protein_id=WP_000763511.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2064957 2066519 . - . ID=gene2037;Name=SH03_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10205;old_locus_tag=SH03_10200 NZ_CP010441.1 Protein Homology CDS 2064957 2066519 . - 0 ID=cds1973;Parent=gene2037;Dbxref=Genbank:WP_001194582.1;Name=WP_001194582.1;gbkey=CDS;product=anthranilate synthase component 1;protein_id=WP_001194582.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2066793 2067674 . + . ID=gene2038;Name=SH03_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10210;old_locus_tag=SH03_10205 NZ_CP010441.1 Protein Homology CDS 2066793 2067674 . + 0 ID=cds1974;Parent=gene2038;Dbxref=Genbank:WP_001285661.1;Name=WP_001285661.1;gbkey=CDS;product=PHP domain-containing protein YciV;protein_id=WP_001285661.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2067671 2068291 . + . ID=gene2039;Name=SH03_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10215;old_locus_tag=SH03_10210 NZ_CP010441.1 Protein Homology CDS 2067671 2068291 . + 0 ID=cds1975;Parent=gene2039;Dbxref=Genbank:WP_001295575.1;Name=WP_001295575.1;gbkey=CDS;product=RNA binding protein;protein_id=WP_001295575.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2068319 2070214 . + . ID=gene2040;Name=SH03_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10220;old_locus_tag=SH03_10215 NZ_CP010441.1 Protein Homology CDS 2068319 2070214 . + 0 ID=cds1976;Parent=gene2040;Dbxref=Genbank:WP_001326916.1;Name=WP_001326916.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001326916.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2070425 2071300 . + . ID=gene2041;Name=SH03_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10225;old_locus_tag=SH03_10220 NZ_CP010441.1 Protein Homology CDS 2070425 2071300 . + 0 ID=cds1977;Parent=gene2041;Dbxref=Genbank:WP_001291217.1;Name=WP_001291217.1;Note=catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase B;protein_id=WP_001291217.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2071340 2071930 . - . ID=gene2042;Name=SH03_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10230;old_locus_tag=SH03_10225 NZ_CP010441.1 Protein Homology CDS 2071340 2071930 . - 0 ID=cds1978;Parent=gene2042;Dbxref=Genbank:WP_001278906.1;Name=WP_001278906.1;Note=catalyzes the formation of adenosylcobalamide from cobinamide and the formation of coenzyme B12 from cob(I)alamin;gbkey=CDS;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_001278906.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2071927 2072685 . - . ID=gene2043;Name=SH03_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10235;old_locus_tag=SH03_10230 NZ_CP010441.1 Protein Homology CDS 2071927 2072685 . - 0 ID=cds1979;Parent=gene2043;Dbxref=Genbank:WP_000559286.1;Name=WP_000559286.1;gbkey=CDS;product=oxoacyl-ACP reductase;protein_id=WP_000559286.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2072729 2072893 . - . ID=gene2044;Name=SH03_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10240;old_locus_tag=SH03_10235 NZ_CP010441.1 Protein Homology CDS 2072729 2072893 . - 0 ID=cds1980;Parent=gene2044;Dbxref=Genbank:WP_001303289.1;Name=WP_001303289.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001303289.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2072905 2073954 . + . ID=gene2045;Name=SH03_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10245;old_locus_tag=SH03_10240 NZ_CP010441.1 Protein Homology CDS 2072905 2073954 . + 0 ID=cds1981;Parent=gene2045;Dbxref=Genbank:WP_000422045.1;Name=WP_000422045.1;Note=multicopy suppressor of htrA(degP);gbkey=CDS;product=protease;protein_id=WP_000422045.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2073990 2074241 . - . ID=gene2046;Name=SH03_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10250;old_locus_tag=SH03_10245 NZ_CP010441.1 Protein Homology CDS 2073990 2074241 . - 0 ID=cds1982;Parent=gene2046;Dbxref=Genbank:WP_001031530.1;Name=WP_001031530.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001031530.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2074346 2074498 . + . ID=gene2047;Name=SH03_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10255;old_locus_tag=SH03_10250 NZ_CP010441.1 Protein Homology CDS 2074346 2074498 . + 0 ID=cds1983;Parent=gene2047;Dbxref=Genbank:WP_014640285.1;Name=WP_014640285.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_014640285.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2074621 2077218 . + . ID=gene2048;Name=SH03_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10260;old_locus_tag=SH03_10255 NZ_CP010441.1 Protein Homology CDS 2074621 2077218 . + 0 ID=cds1984;Parent=gene2048;Dbxref=Genbank:WP_001297122.1;Name=WP_001297122.1;Note=catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity;gbkey=CDS;product=DNA topoisomerase 1;protein_id=WP_001297122.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2077428 2078402 . + . ID=gene2049;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=SH03_RS10265;old_locus_tag=SH03_10260 NZ_CP010441.1 Protein Homology CDS 2077428 2078402 . + 0 ID=cds1985;Parent=gene2049;Dbxref=Genbank:WP_000776253.1;Name=WP_000776253.1;Note=LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation;gbkey=CDS;gene=cysB;product=transcriptional regulator;protein_id=WP_000776253.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2078733 2078861 . + . ID=gene2050;Name=SH03_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10270;old_locus_tag=SH03_10265 NZ_CP010441.1 Protein Homology CDS 2078733 2078861 . + 0 ID=cds1986;Parent=gene2050;Dbxref=Genbank:WP_001295577.1;Name=WP_001295577.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001295577.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2078864 2079031 . + . ID=gene2051;Name=SH03_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10275;old_locus_tag=SH03_10270 NZ_CP010441.1 Protein Homology CDS 2078864 2079031 . + 0 ID=cds1987;Parent=gene2051;Dbxref=Genbank:WP_001297116.1;Name=WP_001297116.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001297116.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2079105 2079230 . - . ID=gene2052;Name=SH03_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10280;old_locus_tag=SH03_10275 NZ_CP010441.1 Protein Homology CDS 2079105 2079230 . - 0 ID=cds1988;Parent=gene2052;Dbxref=Genbank:WP_000616081.1;Name=WP_000616081.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000616081.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2079404 2082079 . + . ID=gene2053;Name=SH03_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10285;old_locus_tag=SH03_10285 NZ_CP010441.1 Protein Homology CDS 2079404 2082079 . + 0 ID=cds1989;Parent=gene2053;Dbxref=Genbank:WP_000099534.1;Name=WP_000099534.1;Note=Catalyzes the conversion of citrate to isocitrate;gbkey=CDS;product=aconitate hydratase;protein_id=WP_000099534.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2082143 2082733 . - . ID=gene2054;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=SH03_RS10290;old_locus_tag=SH03_10290 NZ_CP010441.1 Protein Homology CDS 2082143 2082733 . - 0 ID=cds1990;Parent=gene2054;Dbxref=Genbank:WP_001176295.1;Name=WP_001176295.1;Note=catalyzes the conversion of GTP to formate and 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate;gbkey=CDS;gene=ribA;product=GTP cyclohydrolase-2;protein_id=WP_001176295.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2082903 2083667 . + . ID=gene2055;Name=SH03_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10295;old_locus_tag=SH03_10295 NZ_CP010441.1 Protein Homology CDS 2082903 2083667 . + 0 ID=cds1991;Parent=gene2055;Dbxref=Genbank:WP_001256538.1;Name=WP_001256538.1;gbkey=CDS;product=phosphatidylglycerophosphatase B;protein_id=WP_001256538.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2083816 2084124 . + . ID=gene2056;Name=SH03_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10300;old_locus_tag=SH03_10300 NZ_CP010441.1 Protein Homology CDS 2083816 2084124 . + 0 ID=cds1992;Parent=gene2056;Dbxref=Genbank:WP_000876286.1;Name=WP_000876286.1;gbkey=CDS;product=LPS assembly protein A;protein_id=WP_000876286.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2084131 2085300 . + . ID=gene2057;Name=SH03_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10305;old_locus_tag=SH03_10305 NZ_CP010441.1 Protein Homology CDS 2084131 2085300 . + 0 ID=cds1993;Parent=gene2057;Dbxref=Genbank:WP_000891353.1;Name=WP_000891353.1;gbkey=CDS;product=LPS assembly protein B;protein_id=WP_000891353.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2085494 2086231 . + . ID=gene2058;Name=SH03_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10310;old_locus_tag=SH03_10310 NZ_CP010441.1 Protein Homology CDS 2085494 2086231 . + 0 ID=cds1994;Parent=gene2058;Dbxref=Genbank:WP_000176270.1;Name=WP_000176270.1;gbkey=CDS;product=orotidine 5'-phosphate decarboxylase;protein_id=WP_000176270.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2086231 2086557 . + . ID=gene2059;Name=SH03_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10315;old_locus_tag=SH03_10315 NZ_CP010441.1 Protein Homology CDS 2086231 2086557 . + 0 ID=cds1995;Parent=gene2059;Dbxref=Genbank:WP_001295580.1;Name=WP_001295580.1;Note=involved in start site selection during the initiation of translation;gbkey=CDS;product=initiation factor function;protein_id=WP_001295580.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2086683 2086901 . - . ID=gene2060;Name=SH03_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10320;old_locus_tag=SH03_10320 NZ_CP010441.1 Protein Homology CDS 2086683 2086901 . - 0 ID=cds1996;Parent=gene2060;Dbxref=Genbank:WP_000498253.1;Name=WP_000498253.1;gbkey=CDS;product=osmotically-inducible lipoprotein B;protein_id=WP_000498253.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2087170 2087919 . - . ID=gene2061;Name=SH03_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10325;old_locus_tag=SH03_10325 NZ_CP010441.1 Protein Homology CDS 2087170 2087919 . - 0 ID=cds1997;Parent=gene2061;Dbxref=Genbank:WP_001088620.1;Name=WP_001088620.1;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_001088620.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2088009 2088182 . - . ID=gene2062;Name=SH03_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10330;old_locus_tag=SH03_10330 NZ_CP010441.1 Protein Homology CDS 2088009 2088182 . - 0 ID=cds1998;Parent=gene2062;Dbxref=Genbank:WP_001288368.1;Name=WP_001288368.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001288368.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2088330 2090315 . - . ID=gene2063;Name=SH03_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10335;old_locus_tag=SH03_10335 NZ_CP010441.1 Protein Homology CDS 2088330 2090315 . - 0 ID=cds1999;Parent=gene2063;Dbxref=Genbank:WP_000859945.1;Name=WP_000859945.1;Note=c-di-GMP phosphodiesterase%3B probably degrades signalling molecule c-di-GMP;gbkey=CDS;product=cyclic di-GMP phosphodiesterase Gmr;protein_id=WP_000859945.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2090369 2090473 . + . ID=gene2064;Name=SH03_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10340;old_locus_tag=SH03_10340 NZ_CP010441.1 Protein Homology CDS 2090369 2090473 . + 0 ID=cds2000;Parent=gene2064;Dbxref=Genbank:WP_000221855.1;Name=WP_000221855.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000221855.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2090551 2092485 . - . ID=gene2065;Name=SH03_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10345;old_locus_tag=SH03_10345 NZ_CP010441.1 Protein Homology CDS 2090551 2092485 . - 0 ID=cds2001;Parent=gene2065;Dbxref=Genbank:WP_000484984.1;Name=WP_000484984.1;Note=Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction;gbkey=CDS;product=exoribonuclease 2;protein_id=WP_000484984.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2092553 2093680 . - . ID=gene2066;Name=SH03_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10350;old_locus_tag=SH03_10350 NZ_CP010441.1 Protein Homology CDS 2092553 2093680 . - 0 ID=cds2002;Parent=gene2066;Dbxref=Genbank:WP_001335988.1;Name=WP_001335988.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_001335988.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2093824 2094612 . - . ID=gene2067;Name=SH03_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10355;old_locus_tag=SH03_10355 NZ_CP010441.1 Protein Homology CDS 2093824 2094612 . - 0 ID=cds2003;Parent=gene2067;Dbxref=Genbank:WP_000506490.1;Name=WP_000506490.1;Note=Catalyzes a key regulatory step in fatty acid biosynthesis;gbkey=CDS;product=enoyl-ACP reductase [NADH];protein_id=WP_000506490.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2094980 2095330 . - . ID=gene2068;Name=SH03_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10360;old_locus_tag=SH03_10365 NZ_CP010441.1 Protein Homology CDS 2094980 2095330 . - 0 ID=cds2004;Parent=gene2068;Dbxref=Genbank:WP_024168544.1;Name=WP_024168544.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_024168544.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2095401 2096207 . - . ID=gene2069;Name=SH03_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10365;old_locus_tag=SH03_10370 NZ_CP010441.1 Protein Homology CDS 2095401 2096207 . - 0 ID=cds2005;Parent=gene2069;Dbxref=Genbank:WP_000573407.1;Name=WP_000573407.1;gbkey=CDS;product=peptide transport system ATP-binding protein SapF;protein_id=WP_000573407.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2096209 2097201 . - . ID=gene2070;Name=SH03_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10370;old_locus_tag=SH03_10375 NZ_CP010441.1 Protein Homology CDS 2096209 2097201 . - 0 ID=cds2006;Parent=gene2070;Dbxref=Genbank:WP_001128858.1;Name=WP_001128858.1;Note=involved in resistance to antimibial peptides;gbkey=CDS;product=peptide transport system ATP-binding protein SapD;protein_id=WP_001128858.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2097201 2098091 . - . ID=gene2071;Name=SH03_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10375;old_locus_tag=SH03_10380 NZ_CP010441.1 Protein Homology CDS 2097201 2098091 . - 0 ID=cds2007;Parent=gene2071;Dbxref=Genbank:WP_001146163.1;Name=WP_001146163.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_001146163.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2098078 2099043 . - . ID=gene2072;Name=SH03_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10380;old_locus_tag=SH03_10385 NZ_CP010441.1 Protein Homology CDS 2098078 2099043 . - 0 ID=cds2008;Parent=gene2072;Dbxref=Genbank:WP_000583277.1;Name=WP_000583277.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_000583277.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2099040 2100683 . - . ID=gene2073;Name=SH03_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10385;old_locus_tag=SH03_10390 NZ_CP010441.1 Protein Homology CDS 2099040 2100683 . - 0 ID=cds2009;Parent=gene2073;Dbxref=Genbank:WP_001250216.1;Name=WP_001250216.1;gbkey=CDS;product=peptide transport periplasmic protein SapA;protein_id=WP_001250216.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2100726 2100926 . - . ID=gene2074;Name=SH03_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10390;old_locus_tag=SH03_10395 NZ_CP010441.1 Protein Homology CDS 2100726 2100926 . - 0 ID=cds2010;Parent=gene2074;Dbxref=Genbank:WP_032339682.1;Name=WP_032339682.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032339682.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2100996 2101241 . - . ID=gene2075;Name=SH03_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10395;old_locus_tag=SH03_10400 NZ_CP010441.1 Protein Homology CDS 2100996 2101241 . - 0 ID=cds2011;Parent=gene2075;Dbxref=Genbank:WP_001015110.1;Name=WP_001015110.1;gbkey=CDS;product=DUF2543 domain-containing protein;protein_id=WP_001015110.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2101375 2102760 . - . ID=gene2076;Name=SH03_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10400;old_locus_tag=SH03_10405 NZ_CP010441.1 Protein Homology CDS 2101375 2102760 . - 0 ID=cds2012;Parent=gene2076;Dbxref=Genbank:WP_001395398.1;Name=WP_001395398.1;gbkey=CDS;product=putrescine importer;protein_id=WP_001395398.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2103063 2104481 . - . ID=gene2077;Name=SH03_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10405;old_locus_tag=SH03_10410 NZ_CP010441.1 Protein Homology CDS 2103063 2104481 . - 0 ID=cds2013;Parent=gene2077;Dbxref=Genbank:WP_001296746.1;Name=WP_001296746.1;gbkey=CDS;product=gamma-glutamylputrescine synthetase PuuA;protein_id=WP_001296746.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2104693 2105457 . + . ID=gene2078;Name=puuD;gbkey=Gene;gene=puuD;gene_biotype=protein_coding;locus_tag=SH03_RS10410;old_locus_tag=SH03_10415 NZ_CP010441.1 Protein Homology CDS 2104693 2105457 . + 0 ID=cds2014;Parent=gene2078;Dbxref=Genbank:WP_001300506.1;Name=WP_001300506.1;Note=catalyzes the degradation of gamma-glutamyl-gamma-aminobutyrate into glutamate and gamma-aminobutyrate;gbkey=CDS;gene=puuD;product=gamma-glutamyl-gamma-aminobutyrate hydrolase;protein_id=WP_001300506.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2105484 2106041 . + . ID=gene2079;Name=SH03_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10415;old_locus_tag=SH03_10420 NZ_CP010441.1 Protein Homology CDS 2105484 2106041 . + 0 ID=cds2015;Parent=gene2079;Dbxref=Genbank:WP_001278727.1;Name=WP_001278727.1;Note=regulates genes involved in putrescine degradation;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001278727.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2106316 2107803 . + . ID=gene2080;Name=SH03_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10420;old_locus_tag=SH03_10425 NZ_CP010441.1 Protein Homology CDS 2106316 2107803 . + 0 ID=cds2016;Parent=gene2080;Dbxref=Genbank:WP_001009090.1;Name=WP_001009090.1;gbkey=CDS;product=aldehyde dehydrogenase PuuC;protein_id=WP_001009090.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2107805 2109085 . + . ID=gene2081;Name=SH03_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10425;old_locus_tag=SH03_10430 NZ_CP010441.1 Protein Homology CDS 2107805 2109085 . + 0 ID=cds2017;Parent=gene2081;Dbxref=Genbank:WP_000134870.1;Name=WP_000134870.1;Note=catalyzes the formation of gamma-glutamyl-gamma-aminobutyraldehyde from gamma-glutamylputrescine;gbkey=CDS;product=gamma-glutamylputrescine oxidoreductase;protein_id=WP_000134870.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2109123 2110388 . + . ID=gene2082;Name=SH03_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10430;old_locus_tag=SH03_10435 NZ_CP010441.1 Protein Homology CDS 2109123 2110388 . + 0 ID=cds2018;Parent=gene2082;Dbxref=Genbank:WP_000069229.1;Name=WP_000069229.1;Note=catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate;gbkey=CDS;product=4-aminobutyrate aminotransferase PuuE;protein_id=WP_000069229.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2110508 2111485 . - . ID=gene2083;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=SH03_RS10435;old_locus_tag=SH03_10440 NZ_CP010441.1 Protein Homology CDS 2110508 2111485 . - 0 ID=cds2019;Parent=gene2083;Dbxref=Genbank:WP_001301108.1;Name=WP_001301108.1;Note=transcriptional activator for pspABCE which are induced in response to phage proteins%2C membrane altering stresses%2C and impaired proton expor;gbkey=CDS;gene=pspF;product=psp operon transcriptional activator;protein_id=WP_001301108.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2111652 2112320 . + . ID=gene2084;Name=SH03_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10440;old_locus_tag=SH03_10445 NZ_CP010441.1 Protein Homology CDS 2111652 2112320 . + 0 ID=cds2020;Parent=gene2084;Dbxref=Genbank:WP_000511025.1;Name=WP_000511025.1;Note=involved in maintaining membrane potential under membrane stress conditions%3B also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF;gbkey=CDS;product=phage shock protein A;protein_id=WP_000511025.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2112374 2112598 . + . ID=gene2085;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=SH03_RS10445;old_locus_tag=SH03_10450 NZ_CP010441.1 Protein Homology CDS 2112374 2112598 . + 0 ID=cds2021;Parent=gene2085;Dbxref=Genbank:WP_046377549.1;Name=WP_046377549.1;Note=DNA-binding transcriptional regulator%3B acts together with PspC to induce psp operon during infection with phage%2C exposure to ethanol or osmotic shock%3B forms a complex with PspA and C%3B PspC is required for PspAB binding;gbkey=CDS;gene=pspB;product=phage shock protein;protein_id=WP_046377549.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2112598 2112957 . + . ID=gene2086;Name=SH03_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10450;old_locus_tag=SH03_10455 NZ_CP010441.1 Protein Homology CDS 2112598 2112957 . + 0 ID=cds2022;Parent=gene2086;Dbxref=Genbank:WP_000907387.1;Name=WP_000907387.1;Note=with PsbB forms toxin/antitoxin pair%3B activates the psp operon in response to phage infection%2C exposure to ethanol or osmotic shock;gbkey=CDS;product=phage shock protein C;protein_id=WP_000907387.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2112966 2113187 . + . ID=gene2087;Name=SH03_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10455;old_locus_tag=SH03_10460 NZ_CP010441.1 Protein Homology CDS 2112966 2113187 . + 0 ID=cds2023;Parent=gene2087;Dbxref=Genbank:WP_001295585.1;Name=WP_001295585.1;gbkey=CDS;product=phage shock protein D;protein_id=WP_001295585.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2113262 2113576 . + . ID=gene2088;Name=SH03_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10460;old_locus_tag=SH03_10465 NZ_CP010441.1 Protein Homology CDS 2113262 2113576 . + 0 ID=cds2024;Parent=gene2088;Dbxref=Genbank:WP_000473109.1;Name=WP_000473109.1;Note=rhodanese%3B catalyzes the formation of thiocyanate from thiosulfate and hydrogen cyanide;gbkey=CDS;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000473109.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2113789 2115468 . + . ID=gene2089;Name=SH03_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10465;old_locus_tag=SH03_10470 NZ_CP010441.1 Protein Homology CDS 2113789 2115468 . + 0 ID=cds2025;Parent=gene2089;Dbxref=Genbank:WP_000810499.1;Name=WP_000810499.1;gbkey=CDS;product=alpha amylase catalytic domain family protein;protein_id=WP_000810499.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2115482 2116774 . + . ID=gene2090;Name=SH03_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10470;old_locus_tag=SH03_10475 NZ_CP010441.1 Protein Homology CDS 2115482 2116774 . + 0 ID=cds2026;Parent=gene2090;Dbxref=Genbank:WP_000597466.1;Name=WP_000597466.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_000597466.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2116795 2117676 . + . ID=gene2091;Name=SH03_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10475;old_locus_tag=SH03_10480 NZ_CP010441.1 Protein Homology CDS 2116795 2117676 . + 0 ID=cds2027;Parent=gene2091;Dbxref=Genbank:WP_001080790.1;Name=WP_001080790.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_001080790.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2117663 2118505 . + . ID=gene2092;Name=SH03_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10480;old_locus_tag=SH03_10485 NZ_CP010441.1 Protein Homology CDS 2117663 2118505 . + 0 ID=cds2028;Parent=gene2092;Dbxref=Genbank:WP_000224659.1;Name=WP_000224659.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_000224659.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2118536 2119588 . + . ID=gene2093;Name=SH03_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10485;old_locus_tag=SH03_10490 NZ_CP010441.1 Protein Homology CDS 2118536 2119588 . + 0 ID=cds2029;Parent=gene2093;Dbxref=Genbank:WP_000737347.1;Name=WP_000737347.1;gbkey=CDS;product=Zn-dependent NAD(P)-binding oxidoreductase;protein_id=WP_000737347.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2119607 2120395 . + . ID=gene2094;Name=SH03_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10490;old_locus_tag=SH03_10495 NZ_CP010441.1 Protein Homology CDS 2119607 2120395 . + 0 ID=cds2030;Parent=gene2094;Dbxref=Genbank:WP_000690229.1;Name=WP_000690229.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000690229.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2120405 2121460 . + . ID=gene2095;Name=SH03_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10495;old_locus_tag=SH03_10500 NZ_CP010441.1 Protein Homology CDS 2120405 2121460 . + 0 ID=cds2031;Parent=gene2095;Dbxref=Genbank:WP_001395397.1;Name=WP_001395397.1;gbkey=CDS;product=NADH-binding oxidoreductase;protein_id=WP_001395397.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2121457 2123724 . + . ID=gene2096;Name=SH03_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10500;old_locus_tag=SH03_10505 NZ_CP010441.1 Protein Homology CDS 2121457 2123724 . + 0 ID=cds2032;Parent=gene2096;Dbxref=Genbank:WP_000198036.1;Name=WP_000198036.1;gbkey=CDS;product=family 65 glycosyl hydrolase;protein_id=WP_000198036.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2123721 2124380 . + . ID=gene2097;Name=SH03_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10505;old_locus_tag=SH03_10510 NZ_CP010441.1 Protein Homology CDS 2123721 2124380 . + 0 ID=cds2033;Parent=gene2097;Dbxref=Genbank:WP_000775794.1;Name=WP_000775794.1;Note=catalyzes the interconversion of beta-D-glucose 6-phosphate to beta-D-glucose 1-phosphate;gbkey=CDS;product=beta-phosphoglucomutase;protein_id=WP_000775794.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2124394 2125475 . + . ID=gene2098;Name=SH03_RS10510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS10510;pseudo=true NZ_CP010441.1 Protein Homology CDS 2124394 2125475 . + 0 ID=cds2034;Parent=gene2098;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 2125520 2126425 . + . ID=gene2099;Name=SH03_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10515;old_locus_tag=SH03_10520 NZ_CP010441.1 Protein Homology CDS 2125520 2126425 . + 0 ID=cds2035;Parent=gene2099;Dbxref=Genbank:WP_000735257.1;Name=WP_000735257.1;gbkey=CDS;product=outer membrane protein G;protein_id=WP_000735257.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2126536 2127534 . - . ID=gene2100;Name=SH03_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10520;old_locus_tag=SH03_10525 NZ_CP010441.1 Protein Homology CDS 2126536 2127534 . - 0 ID=cds2036;Parent=gene2100;Dbxref=Genbank:WP_000075375.1;Name=WP_000075375.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_000075375.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2127690 2129087 . + . ID=gene2101;Name=SH03_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10525;old_locus_tag=SH03_10530 NZ_CP010441.1 Protein Homology CDS 2127690 2129087 . + 0 ID=cds2037;Parent=gene2101;Dbxref=Genbank:WP_000825775.1;Name=WP_000825775.1;gbkey=CDS;product=DUF463 domain-containing protein;protein_id=WP_000825775.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2129084 2130145 . + . ID=gene2102;Name=SH03_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10530;old_locus_tag=SH03_10535 NZ_CP010441.1 Protein Homology CDS 2129084 2130145 . + 0 ID=cds2038;Parent=gene2102;Dbxref=Genbank:WP_000138728.1;Name=WP_000138728.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000138728.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2130293 2131834 . + . ID=gene2103;Name=SH03_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10535;old_locus_tag=SH03_10540 NZ_CP010441.1 Protein Homology CDS 2130293 2131834 . + 0 ID=cds2039;Parent=gene2103;Dbxref=Genbank:WP_001300658.1;Name=WP_001300658.1;Note=regulates genes involved in the biosynthesis and transport of aromatic amino acids;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001300658.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2131878 2132384 . - . ID=gene2104;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=SH03_RS10540;old_locus_tag=SH03_10545 NZ_CP010441.1 Protein Homology CDS 2131878 2132384 . - 0 ID=cds2040;Parent=gene2104;Dbxref=Genbank:WP_000084387.1;Name=WP_000084387.1;Note=antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein;gbkey=CDS;gene=tpx;product=thiol peroxidase;protein_id=WP_000084387.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2132503 2133468 . + . ID=gene2105;Name=SH03_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10545;old_locus_tag=SH03_10550 NZ_CP010441.1 Protein Homology CDS 2132503 2133468 . + 0 ID=cds2041;Parent=gene2105;Dbxref=Genbank:WP_001261211.1;Name=WP_001261211.1;Note=catalyzes the epimerization of L-alanyl-D-glutamate to L-alanyl-L-glutamate;gbkey=CDS;product=L-Ala-D/L-Glu epimerase;protein_id=WP_001261211.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2133443 2134171 . - . ID=gene2106;Name=SH03_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10550;old_locus_tag=SH03_10555 NZ_CP010441.1 Protein Homology CDS 2133443 2134171 . - 0 ID=cds2042;Parent=gene2106;Dbxref=Genbank:WP_000219122.1;Name=WP_000219122.1;gbkey=CDS;product=protein MpaA;protein_id=WP_000219122.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2134253 2134435 . - . ID=gene2107;Name=SH03_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10555;old_locus_tag=SH03_10560 NZ_CP010441.1 Protein Homology CDS 2134253 2134435 . - 0 ID=cds2043;Parent=gene2107;Dbxref=Genbank:WP_000800171.1;Name=WP_000800171.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000800171.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2134506 2135426 . - . ID=gene2108;Name=SH03_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10560;old_locus_tag=SH03_10565 NZ_CP010441.1 Protein Homology CDS 2134506 2135426 . - 0 ID=cds2044;Parent=gene2108;Dbxref=Genbank:WP_001300523.1;Name=WP_001300523.1;gbkey=CDS;product=S9 homolog non-peptidase;protein_id=WP_001300523.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2135564 2136463 . + . ID=gene2109;Name=SH03_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10565;old_locus_tag=SH03_10570 NZ_CP010441.1 Protein Homology CDS 2135564 2136463 . + 0 ID=cds2045;Parent=gene2109;Dbxref=Genbank:WP_000817708.1;Name=WP_000817708.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000817708.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2136552 2136677 . + . ID=gene2110;Name=SH03_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10570;old_locus_tag=SH03_10575 NZ_CP010441.1 Protein Homology CDS 2136552 2136677 . + 0 ID=cds2046;Parent=gene2110;Dbxref=Genbank:WP_001308630.1;Name=WP_001308630.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001308630.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2136800 2138413 . + . ID=gene2111;Name=SH03_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10575;old_locus_tag=SH03_10580 NZ_CP010441.1 Protein Homology CDS 2136800 2138413 . + 0 ID=cds2047;Parent=gene2111;Dbxref=Genbank:WP_000683020.1;Name=WP_000683020.1;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;gbkey=CDS;product=periplasmic murein peptide-binding protein;protein_id=WP_000683020.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2138464 2139495 . - . ID=gene2112;Name=SH03_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10580;old_locus_tag=SH03_10585 NZ_CP010441.1 Protein Homology CDS 2138464 2139495 . - 0 ID=cds2048;Parent=gene2112;Dbxref=Genbank:WP_000559900.1;Name=WP_000559900.1;gbkey=CDS;product=low conductance mechanosensitive channel YnaI;protein_id=WP_000559900.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 2139613 2140816 . + . ID=id131;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 2139685 2140665 . + . ID=gene2113;Name=SH03_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10585;old_locus_tag=SH03_10590 NZ_CP010441.1 Protein Homology CDS 2139685 2140665 . + 0 ID=cds2049;Parent=gene2113;Dbxref=Genbank:WP_000019403.1;Name=WP_000019403.1;gbkey=CDS;product=transposase;protein_id=WP_000019403.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2140938 2141195 . + . ID=gene2114;Name=SH03_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10590;old_locus_tag=SH03_10595 NZ_CP010441.1 Protein Homology CDS 2140938 2141195 . + 0 ID=cds2050;Parent=gene2114;Dbxref=Genbank:WP_000605090.1;Name=WP_000605090.1;gbkey=CDS;product=DUF2534 domain-containing protein;protein_id=WP_000605090.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2141245 2142195 . - . ID=gene2115;Name=SH03_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10595;old_locus_tag=SH03_10600 NZ_CP010441.1 Protein Homology CDS 2141245 2142195 . - 0 ID=cds2051;Parent=gene2115;Dbxref=Genbank:WP_001262123.1;Name=WP_001262123.1;Note=with UspC and UspD is involved in resistance to UV irradiation;gbkey=CDS;product=universal stress protein E;protein_id=WP_001262123.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2142347 2143099 . - . ID=gene2116;Name=SH03_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10600;old_locus_tag=SH03_10605 NZ_CP010441.1 Protein Homology CDS 2142347 2143099 . - 0 ID=cds2052;Parent=gene2116;Dbxref=Genbank:WP_000611911.1;Name=WP_000611911.1;Note=Global transcription factor that controls the expression of over 100 target genes in response to anoxia;gbkey=CDS;product=fumarate and nitrate reduction regulatory protein;protein_id=WP_000611911.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2143294 2143809 . - . ID=gene2117;Name=SH03_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10605;old_locus_tag=SH03_10610 NZ_CP010441.1 Protein Homology CDS 2143294 2143809 . - 0 ID=cds2053;Parent=gene2117;Dbxref=Genbank:WP_000945011.1;Name=WP_000945011.1;gbkey=CDS;product=methylated-DNA--protein-cysteine methyltransferase;protein_id=WP_000945011.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2143820 2145346 . - . ID=gene2118;Name=SH03_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10610;old_locus_tag=SH03_10615 NZ_CP010441.1 Protein Homology CDS 2143820 2145346 . - 0 ID=cds2054;Parent=gene2118;Dbxref=Genbank:WP_000062973.1;Name=WP_000062973.1;gbkey=CDS;product=p-aminobenzoyl-glutamate transporter;protein_id=WP_000062973.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2145276 2145470 . - . ID=gene2119;Name=SH03_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10615;old_locus_tag=SH03_10620 NZ_CP010441.1 Protein Homology CDS 2145276 2145470 . - 0 ID=cds2055;Parent=gene2119;Dbxref=Genbank:WP_032082751.1;Name=WP_032082751.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032082751.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2145383 2146828 . - . ID=gene2120;Name=SH03_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10620;old_locus_tag=SH03_10625 NZ_CP010441.1 Protein Homology CDS 2145383 2146828 . - 0 ID=cds2056;Parent=gene2120;Dbxref=Genbank:WP_001156451.1;Name=WP_001156451.1;gbkey=CDS;product=p-aminobenzoyl-glutamate hydrolase subunit B;protein_id=WP_001156451.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2146828 2148138 . - . ID=gene2121;Name=SH03_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10625;old_locus_tag=SH03_10630 NZ_CP010441.1 Protein Homology CDS 2146828 2148138 . - 0 ID=cds2057;Parent=gene2121;Dbxref=Genbank:WP_000444929.1;Name=WP_000444929.1;gbkey=CDS;product=p-aminobenzoyl-glutamate hydrolase subunit A;protein_id=WP_000444929.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2148314 2149222 . + . ID=gene2122;Name=SH03_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10630;old_locus_tag=SH03_10635 NZ_CP010441.1 Protein Homology CDS 2148314 2149222 . + 0 ID=cds2058;Parent=gene2122;Dbxref=Genbank:WP_000885458.1;Name=WP_000885458.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000885458.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2149294 2149404 . - . ID=gene2123;Name=SH03_RS10635;end_range=2149404,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS10635;partial=true;pseudo=true NZ_CP010441.1 Protein Homology CDS 2149294 2149404 . - 0 ID=cds2059;Parent=gene2123;end_range=2149404,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=glutamate decarboxylase;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 2149552 2150115 . + . ID=gene2124;Name=SH03_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10640;old_locus_tag=SH03_10645 NZ_CP010441.1 Protein Homology CDS 2149552 2150115 . + 0 ID=cds2060;Parent=gene2124;Dbxref=Genbank:WP_001046829.1;Name=WP_001046829.1;gbkey=CDS;product=DNA endonuclease SmrA;protein_id=WP_001046829.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2150136 2151368 . - . ID=gene2125;Name=SH03_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10645;old_locus_tag=SH03_10650 NZ_CP010441.1 Protein Homology CDS 2150136 2151368 . - 0 ID=cds2061;Parent=gene2125;Dbxref=Genbank:WP_000628058.1;Name=WP_000628058.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_000628058.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2151623 2152606 . + . ID=gene2126;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=SH03_RS10650;old_locus_tag=SH03_10655 NZ_CP010441.1 Protein Homology CDS 2151623 2152606 . + 0 ID=cds2062;Parent=gene2126;Dbxref=Genbank:WP_000387388.1;Name=WP_000387388.1;gbkey=CDS;gene=zntB;product=zinc transporter ZntB;protein_id=WP_000387388.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2152881 2153054 . + . ID=gene2127;Name=SH03_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10655;old_locus_tag=SH03_10660 NZ_CP010441.1 Protein Homology CDS 2152881 2153054 . + 0 ID=cds2063;Parent=gene2127;Dbxref=Genbank:WP_001296046.1;Name=WP_001296046.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001296046.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2153084 2154457 . + . ID=gene2128;Name=SH03_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10660;old_locus_tag=SH03_10665 NZ_CP010441.1 Protein Homology CDS 2153084 2154457 . + 0 ID=cds2064;Parent=gene2128;Dbxref=Genbank:WP_000123737.1;Name=WP_000123737.1;Note=exhibits an RNA-dependent ATPase activity%2C specifically stimulated by bacterial 23S rRNA;gbkey=CDS;product=ATP-dependent RNA helicase DbpA;protein_id=WP_000123737.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2154586 2155521 . - . ID=gene2129;Name=SH03_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10665;old_locus_tag=SH03_10670 NZ_CP010441.1 Protein Homology CDS 2154586 2155521 . - 0 ID=cds2065;Parent=gene2129;Dbxref=Genbank:WP_001157406.1;Name=WP_001157406.1;Note=TtcA%3B YdaO%3B catalyzes the thiolation of cytosine 32 in specific tRNAs%3B forms 2-thiocytidine (s(2)C);gbkey=CDS;product=tRNA 2-thiocytidine biosynthesis protein TtcA;protein_id=WP_001157406.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2155573 2155713 . - . ID=gene2130;Name=SH03_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10670;old_locus_tag=SH03_10675 NZ_CP010441.1 Protein Homology CDS 2155573 2155713 . - 0 ID=cds2066;Parent=gene2130;Dbxref=Genbank:WP_005023097.1;Name=WP_005023097.1;gbkey=CDS;product=integrase;protein_id=WP_005023097.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2156810 2157025 . - . ID=gene2131;Name=SH03_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10675;old_locus_tag=SH03_10680 NZ_CP010441.1 Protein Homology CDS 2156810 2157025 . - 0 ID=cds2067;Parent=gene2131;Dbxref=Genbank:WP_000079604.1;Name=WP_000079604.1;gbkey=CDS;product=Rac prophage%3B conserved protein;protein_id=WP_000079604.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2157104 2157313 . - . ID=gene2132;Name=SH03_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10680;old_locus_tag=SH03_10685 NZ_CP010441.1 Protein Homology CDS 2157104 2157313 . - 0 ID=cds2068;Parent=gene2132;Dbxref=Genbank:WP_000276809.1;Name=WP_000276809.1;Note=Rac prophage;gbkey=CDS;product=double-strand break reduction protein;protein_id=WP_000276809.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2157306 2157500 . - . ID=gene2133;Name=lar;gbkey=Gene;gene=lar;gene_biotype=protein_coding;locus_tag=SH03_RS10685;old_locus_tag=SH03_10690 NZ_CP010441.1 Protein Homology CDS 2157306 2157500 . - 0 ID=cds2069;Parent=gene2133;Dbxref=Genbank:WP_001317028.1;Name=WP_001317028.1;Note=seems to be involved in restriction alleviation and enhancement of modification by EcoKI%2C but not in restriction alleviation of type III restriction systems%3B Rac prophage;gbkey=CDS;gene=lar;product=restriction alleviation and modification enhancement protein;protein_id=WP_001317028.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2157557 2158366 . - . ID=gene2134;Name=recT;gbkey=Gene;gene=recT;gene_biotype=protein_coding;locus_tag=SH03_RS10690;old_locus_tag=SH03_10695 NZ_CP010441.1 Protein Homology CDS 2157557 2158366 . - 0 ID=cds2070;Parent=gene2134;Dbxref=Genbank:WP_000166319.1;Name=WP_000166319.1;gbkey=CDS;gene=recT;product=DNA recombination protein RecT;protein_id=WP_000166319.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2158359 2160959 . - . ID=gene2135;Name=SH03_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10695;old_locus_tag=SH03_10700 NZ_CP010441.1 Protein Homology CDS 2158359 2160959 . - 0 ID=cds2071;Parent=gene2135;Dbxref=Genbank:WP_000105143.1;Name=WP_000105143.1;Note=The RecE (also known as exonuclease VIII) pathway is an alternative pathway for the initiation of homologous recombination in Escherichia coli. The RecE pathway is activated in recB%2C recC sbcA (suppressors of recB and recC) mutants. Activation of the RecE pathway results in the production of at least two phage proteins relevant for recombinational repair. RecE is a duplex DNA-specific exonuclease which produces 3' overhangs in duplex DNA by preferentially degrading the 5'-ending strands. Recombinational repair of E.coli chromosomal DNA involves as well other proteins: RecA%2C RecF%2C RecJ%2C RecO%2C RecR%2C and RuvC.;gbkey=CDS;product=exodeoxyribonuclease 8;protein_id=WP_000105143.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2161061 2161336 . - . ID=gene2136;Name=SH03_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10700;old_locus_tag=SH03_10705 NZ_CP010441.1 Protein Homology CDS 2161061 2161336 . - 0 ID=cds2072;Parent=gene2136;Dbxref=Genbank:WP_000632297.1;Name=WP_000632297.1;Note=Rac prophage hypothetical protein;gbkey=CDS;product=protein RacC;protein_id=WP_000632297.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2161411 2161587 . - . ID=gene2137;Name=SH03_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10705;old_locus_tag=SH03_10710 NZ_CP010441.1 Protein Homology CDS 2161411 2161587 . - 0 ID=cds2073;Parent=gene2137;Dbxref=Genbank:WP_000245524.1;Name=WP_000245524.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000245524.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2161581 2161802 . - . ID=gene2138;Name=kil;gbkey=Gene;gene=kil;gene_biotype=protein_coding;locus_tag=SH03_RS10710;old_locus_tag=SH03_10715 NZ_CP010441.1 Protein Homology CDS 2161581 2161802 . - 0 ID=cds2074;Parent=gene2138;Dbxref=Genbank:WP_000560225.1;Name=WP_000560225.1;Note=Rac prophage Kil protein%3B Kil overexpression leads to morphological defects and inhibits cell division;gbkey=CDS;gene=kil;product=killing protein KilR;protein_id=WP_000560225.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2162244 2162732 . + . ID=gene2139;Name=SH03_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10715;old_locus_tag=SH03_10720 NZ_CP010441.1 Protein Homology CDS 2162244 2162732 . + 0 ID=cds2075;Parent=gene2139;Dbxref=Genbank:WP_001312793.1;Name=WP_001312793.1;gbkey=CDS;product=superinfection exclusion protein B;protein_id=WP_001312793.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2162729 2162884 . - . ID=gene2140;Name=SH03_RS22875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22875 NZ_CP010441.1 Protein Homology CDS 2162729 2162884 . - 0 ID=cds2076;Parent=gene2140;Dbxref=Genbank:WP_001169151.1;Name=WP_001169151.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001169151.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2163338 2163814 . - . ID=gene2141;Name=SH03_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10720;old_locus_tag=SH03_10725 NZ_CP010441.1 Protein Homology CDS 2163338 2163814 . - 0 ID=cds2077;Parent=gene2141;Dbxref=Genbank:WP_000948459.1;Name=WP_000948459.1;gbkey=CDS;product=Rac prophage repressor;protein_id=WP_000948459.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2163938 2164234 . + . ID=gene2142;Name=SH03_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10725;old_locus_tag=SH03_10730 NZ_CP010441.1 Protein Homology CDS 2163938 2164234 . + 0 ID=cds2078;Parent=gene2142;Dbxref=Genbank:WP_000712069.1;Name=WP_000712069.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000712069.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2164257 2164679 . + . ID=gene2143;Name=SH03_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10730;old_locus_tag=SH03_10735 NZ_CP010441.1 Protein Homology CDS 2164257 2164679 . + 0 ID=cds2079;Parent=gene2143;Dbxref=Genbank:WP_000693797.1;Name=WP_000693797.1;gbkey=CDS;product=Rac prophage%3B uncharacterized protein;protein_id=WP_000693797.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2164692 2165549 . + . ID=gene2144;Name=SH03_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10735;old_locus_tag=SH03_10740 NZ_CP010441.1 Protein Homology CDS 2164692 2165549 . + 0 ID=cds2080;Parent=gene2144;Dbxref=Genbank:WP_000899748.1;Name=WP_000899748.1;gbkey=CDS;product=Rac prophage%3B conserved protein;protein_id=WP_000899748.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2165556 2166302 . + . ID=gene2145;Name=SH03_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10740;old_locus_tag=SH03_10745 NZ_CP010441.1 Protein Homology CDS 2165556 2166302 . + 0 ID=cds2081;Parent=gene2145;Dbxref=Genbank:WP_000788970.1;Name=WP_000788970.1;gbkey=CDS;product=Rac prophage%3B DNA replication protein;protein_id=WP_000788970.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2166325 2166777 . + . ID=gene2146;Name=SH03_RS10745;end_range=2166777,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS10745;partial=true;pseudo=true NZ_CP010441.1 Protein Homology CDS 2166325 2166777 . + 0 ID=cds2082;Parent=gene2146;end_range=2166777,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 2166768 2167217 . + . ID=gene2147;Name=SH03_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10750;old_locus_tag=SH03_10755 NZ_CP010441.1 Protein Homology CDS 2166768 2167217 . + 0 ID=cds2083;Parent=gene2147;Dbxref=Genbank:WP_024262039.1;Name=WP_024262039.1;gbkey=CDS;product=endopeptidase;protein_id=WP_024262039.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 2166777 2167142 . + . ID=id132;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 2167355 2168812 . + . ID=gene2148;Name=SH03_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10755;old_locus_tag=SH03_10760 NZ_CP010441.1 Protein Homology CDS 2167355 2168812 . + 0 ID=cds2084;Parent=gene2148;Dbxref=Genbank:WP_001097895.1;Name=WP_001097895.1;gbkey=CDS;product=Trk system potassium uptake protein TrkG;protein_id=WP_001097895.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2168949 2169212 . + . ID=gene2149;Name=SH03_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10760;old_locus_tag=SH03_10765 NZ_CP010441.1 Protein Homology CDS 2168949 2169212 . + 0 ID=cds2085;Parent=gene2149;Dbxref=Genbank:WP_001350510.1;Name=WP_001350510.1;gbkey=CDS;product=Rac prophage%3B conserved protein;protein_id=WP_001350510.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2169193 2169552 . + . ID=gene2150;Name=SH03_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10765;old_locus_tag=SH03_10770 NZ_CP010441.1 Protein Homology CDS 2169193 2169552 . + 0 ID=cds2086;Parent=gene2150;Dbxref=Genbank:WP_000091628.1;Name=WP_000091628.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000091628.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2169660 2169860 . + . ID=gene2151;Name=SH03_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10770;old_locus_tag=SH03_10775 NZ_CP010441.1 Protein Homology CDS 2169660 2169860 . + 0 ID=cds2087;Parent=gene2151;Dbxref=Genbank:WP_001755909.1;Name=WP_001755909.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001755909.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2170026 2171054 . + . ID=gene2152;Name=SH03_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10775;old_locus_tag=SH03_10780 NZ_CP010441.1 Protein Homology CDS 2170026 2171054 . + 0 ID=cds2088;Parent=gene2152;Dbxref=Genbank:WP_000840614.1;Name=WP_000840614.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000840614.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2170961 2171176 . + . ID=gene2153;Name=SH03_RS10780;end_range=2171176,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS10780;partial=true;pseudo=true;start_range=.,2170961 NZ_CP010441.1 Protein Homology CDS 2170961 2171176 . + 0 ID=cds2089;Parent=gene2153;end_range=2171176,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=enterobacterial Ail/Lom family protein;pseudo=true;start_range=.,2170961;transl_table=11 NZ_CP010441.1 RefSeq gene 2171318 2172298 . - . ID=gene2154;Name=SH03_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10785;old_locus_tag=SH03_10790 NZ_CP010441.1 Protein Homology CDS 2171318 2172298 . - 0 ID=cds2090;Parent=gene2154;Dbxref=Genbank:WP_000019448.1;Name=WP_000019448.1;gbkey=CDS;product=transposase;protein_id=WP_000019448.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2172368 2172556 . + . ID=gene2155;Name=SH03_RS10790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS10790;partial=true;pseudo=true;start_range=.,2172368 NZ_CP010441.1 Protein Homology CDS 2172368 2172556 . + 0 ID=cds2091;Parent=gene2155;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=enterobacterial Ail/Lom family protein;pseudo=true;start_range=.,2172368;transl_table=11 NZ_CP010441.1 RefSeq gene 2172557 2172730 . - . ID=gene2156;Name=SH03_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10795;old_locus_tag=SH03_10800 NZ_CP010441.1 Protein Homology CDS 2172557 2172730 . - 0 ID=cds2092;Parent=gene2156;Dbxref=Genbank:WP_000495484.1;Name=WP_000495484.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000495484.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2173118 2173855 . - . ID=gene2157;Name=SH03_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10800;old_locus_tag=SH03_10805 NZ_CP010441.1 Protein Homology CDS 2173118 2173855 . - 0 ID=cds2093;Parent=gene2157;Dbxref=Genbank:WP_001186025.1;Name=WP_001186025.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001186025.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2173986 2175983 . + . ID=gene2158;Name=SH03_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10805;old_locus_tag=SH03_10810 NZ_CP010441.1 Protein Homology CDS 2173986 2175983 . + 0 ID=cds2094;Parent=gene2158;Dbxref=Genbank:WP_001407603.1;Name=WP_001407603.1;gbkey=CDS;product=membrane protein;protein_id=WP_001407603.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 2175333 2175637 . + . ID=id133;gbkey=repeat_region NZ_CP010441.1 RefSeq repeat_region 2175798 2178335 . + . ID=id134;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 2175983 2176558 . + . ID=gene2159;Name=SH03_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10810;old_locus_tag=SH03_10815 NZ_CP010441.1 Protein Homology CDS 2175983 2176558 . + 0 ID=cds2095;Parent=gene2159;Dbxref=Genbank:WP_001698950.1;Name=WP_001698950.1;gbkey=CDS;product=Tail fiber assembly protein homolog from lambdoid prophage Rac;protein_id=WP_001698950.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2176656 2177246 . - . ID=gene2160;Name=SH03_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10815;old_locus_tag=SH03_10820 NZ_CP010441.1 Protein Homology CDS 2176656 2177246 . - 0 ID=cds2096;Parent=gene2160;Dbxref=Genbank:WP_000086527.1;Name=WP_000086527.1;gbkey=CDS;product=Rac prophage%3B site-specific recombinase;protein_id=WP_000086527.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2177563 2177796 . - . ID=gene2161;Name=SH03_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10820;old_locus_tag=SH03_10825 NZ_CP010441.1 Protein Homology CDS 2177563 2177796 . - 0 ID=cds2097;Parent=gene2161;Dbxref=Genbank:WP_000836770.1;Name=WP_000836770.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_000836770.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2178757 2179191 . - . ID=gene2162;Name=SH03_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10825;old_locus_tag=SH03_10830 NZ_CP010441.1 Protein Homology CDS 2178757 2179191 . - 0 ID=cds2098;Parent=gene2162;Dbxref=Genbank:WP_001300461.1;Name=WP_001300461.1;gbkey=CDS;product=universal stress protein F;protein_id=WP_001300461.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2179332 2180465 . - . ID=gene2163;Name=SH03_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10830;old_locus_tag=SH03_10835 NZ_CP010441.1 Protein Homology CDS 2179332 2180465 . - 0 ID=cds2099;Parent=gene2163;Dbxref=Genbank:WP_000837921.1;Name=WP_000837921.1;Note=allows for ions and hydrophilic solutes to cross the outer membrane;gbkey=CDS;product=outer membrane protein N;protein_id=WP_000837921.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2180832 2184356 . - . ID=gene2164;Name=SH03_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10835;old_locus_tag=SH03_10840 NZ_CP010441.1 Protein Homology CDS 2180832 2184356 . - 0 ID=cds2100;Parent=gene2164;Dbxref=Genbank:WP_000628244.1;Name=WP_000628244.1;gbkey=CDS;product=pyruvate-flavodoxin oxidoreductase;protein_id=WP_000628244.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2184630 2184896 . + . ID=gene2165;Name=SH03_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10840;old_locus_tag=SH03_10845 NZ_CP010441.1 Protein Homology CDS 2184630 2184896 . + 0 ID=cds2101;Parent=gene2165;Dbxref=Genbank:WP_001295715.1;Name=WP_001295715.1;gbkey=CDS;product=DUF333 domain-containing protein;protein_id=WP_001295715.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2184893 2185315 . - . ID=gene2166;Name=SH03_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10845;old_locus_tag=SH03_10850 NZ_CP010441.1 Protein Homology CDS 2184893 2185315 . - 0 ID=cds2102;Parent=gene2166;Dbxref=Genbank:WP_001298828.1;Name=WP_001298828.1;gbkey=CDS;product=heat-shock protein HslJ;protein_id=WP_001298828.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2185426 2186415 . - . ID=gene2167;Name=SH03_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10850;old_locus_tag=SH03_10855 NZ_CP010441.1 Protein Homology CDS 2185426 2186415 . - 0 ID=cds2103;Parent=gene2167;Dbxref=Genbank:WP_000762236.1;Name=WP_000762236.1;Note=fermentative%3B catalyzes the formationof pyruvate from lactate;gbkey=CDS;product=lactate dehydrogenase;protein_id=WP_000762236.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2186623 2189202 . + . ID=gene2168;Name=SH03_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10855 NZ_CP010441.1 Protein Homology CDS 2186623 2189202 . + 0 ID=cds2104;Parent=gene2168;Dbxref=Genbank:WP_046377550.1;Name=WP_046377550.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_046377550.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2189259 2189444 . + . ID=gene2169;Name=SH03_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10860;old_locus_tag=SH03_10865 NZ_CP010441.1 Protein Homology CDS 2189259 2189444 . + 0 ID=cds2105;Parent=gene2169;Dbxref=Genbank:WP_000698145.1;Name=WP_000698145.1;gbkey=CDS;product=lipoprotein;protein_id=WP_000698145.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2189452 2189778 . + . ID=gene2170;Name=SH03_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10865;old_locus_tag=SH03_10870 NZ_CP010441.1 Protein Homology CDS 2189452 2189778 . + 0 ID=cds2106;Parent=gene2170;Dbxref=Genbank:WP_001300734.1;Name=WP_001300734.1;gbkey=CDS;product=DUF1318 domain-containing protein;protein_id=WP_001300734.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2189950 2190855 . - . ID=gene2171;Name=SH03_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10870;old_locus_tag=SH03_10875 NZ_CP010441.1 Protein Homology CDS 2189950 2190855 . - 0 ID=cds2107;Parent=gene2171;Dbxref=Genbank:WP_001067514.1;Name=WP_001067514.1;Note=activator of genes involved in phenylacetic acid catabolism;gbkey=CDS;product=transcriptional activator FeaR;protein_id=WP_001067514.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2191091 2192590 . + . ID=gene2172;Name=SH03_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10875;old_locus_tag=SH03_10880 NZ_CP010441.1 Protein Homology CDS 2191091 2192590 . + 0 ID=cds2108;Parent=gene2172;Dbxref=Genbank:WP_000138615.1;Name=WP_000138615.1;gbkey=CDS;product=phenylacetaldehyde dehydrogenase;protein_id=WP_000138615.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2192648 2194921 . - . ID=gene2173;Name=tynA;gbkey=Gene;gene=tynA;gene_biotype=protein_coding;locus_tag=SH03_RS10880;old_locus_tag=SH03_10885 NZ_CP010441.1 Protein Homology CDS 2192648 2194921 . - 0 ID=cds2109;Parent=gene2173;Dbxref=Genbank:WP_000535469.1;Name=WP_000535469.1;Note=catalyzes the formation of phenylacetaldehyde from 2-phenylethylamine;gbkey=CDS;gene=tynA;product=primary amine oxidase;protein_id=WP_000535469.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2195169 2197214 . - . ID=gene2174;Name=SH03_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10885;old_locus_tag=SH03_10890 NZ_CP010441.1 Protein Homology CDS 2195169 2197214 . - 0 ID=cds2110;Parent=gene2174;Dbxref=Genbank:WP_001186469.1;Name=WP_001186469.1;Note=catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA;gbkey=CDS;product=bifunctional protein PaaZ;protein_id=WP_001186469.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2197499 2198428 . + . ID=gene2175;Name=paaA;gbkey=Gene;gene=paaA;gene_biotype=protein_coding;locus_tag=SH03_RS10890;old_locus_tag=SH03_10895 NZ_CP010441.1 Protein Homology CDS 2197499 2198428 . + 0 ID=cds2111;Parent=gene2175;Dbxref=Genbank:WP_000191077.1;Name=WP_000191077.1;Note=with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA;gbkey=CDS;gene=paaA;product=1%2C2-phenylacetyl-CoA epoxidase subunit A;protein_id=WP_000191077.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2198440 2198727 . + . ID=gene2176;Name=paaB;gbkey=Gene;gene=paaB;gene_biotype=protein_coding;locus_tag=SH03_RS10895;old_locus_tag=SH03_10900 NZ_CP010441.1 Protein Homology CDS 2198440 2198727 . + 0 ID=cds2112;Parent=gene2176;Dbxref=Genbank:WP_000073393.1;Name=WP_000073393.1;Note=with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA%3B involved in phenylacetate degradation;gbkey=CDS;gene=paaB;product=1%2C2-phenylacetyl-CoA epoxidase subunit B;protein_id=WP_000073393.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2198736 2199482 . + . ID=gene2177;Name=SH03_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10900;old_locus_tag=SH03_10905 NZ_CP010441.1 Protein Homology CDS 2198736 2199482 . + 0 ID=cds2113;Parent=gene2177;Dbxref=Genbank:WP_001072837.1;Name=WP_001072837.1;gbkey=CDS;product=1%2C2-phenylacetyl-CoA epoxidase subunit C;protein_id=WP_001072837.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2199497 2199994 . + . ID=gene2178;Name=SH03_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10905;old_locus_tag=SH03_10910 NZ_CP010441.1 Protein Homology CDS 2199497 2199994 . + 0 ID=cds2114;Parent=gene2178;Dbxref=Genbank:WP_001189201.1;Name=WP_001189201.1;gbkey=CDS;product=1%2C2-phenylacetyl-CoA epoxidase;protein_id=WP_001189201.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2200002 2201072 . + . ID=gene2179;Name=SH03_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10910;old_locus_tag=SH03_10915 NZ_CP010441.1 Protein Homology CDS 2200002 2201072 . + 0 ID=cds2115;Parent=gene2179;Dbxref=Genbank:WP_000206388.1;Name=WP_000206388.1;gbkey=CDS;product=1%2C2-phenylacetyl-CoA epoxidase subunit E;protein_id=WP_000206388.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2201069 2201836 . + . ID=gene2180;Name=SH03_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10915;old_locus_tag=SH03_10920 NZ_CP010441.1 Protein Homology CDS 2201069 2201836 . + 0 ID=cds2116;Parent=gene2180;Dbxref=Genbank:WP_001292353.1;Name=WP_001292353.1;gbkey=CDS;product=2%2C3-dehydroadipyl-CoA hydratase;protein_id=WP_001292353.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2201836 2202624 . + . ID=gene2181;Name=SH03_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10920;old_locus_tag=SH03_10925 NZ_CP010441.1 Protein Homology CDS 2201836 2202624 . + 0 ID=cds2117;Parent=gene2181;Dbxref=Genbank:WP_000969784.1;Name=WP_000969784.1;Note=Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA;gbkey=CDS;product=1%2C2-epoxyphenylacetyl-CoA isomerase;protein_id=WP_000969784.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2202626 2204053 . + . ID=gene2182;Name=SH03_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10925;old_locus_tag=SH03_10930 NZ_CP010441.1 Protein Homology CDS 2202626 2204053 . + 0 ID=cds2118;Parent=gene2182;Dbxref=Genbank:WP_000973360.1;Name=WP_000973360.1;gbkey=CDS;product=3-hydroxyadipyl-CoA dehydrogenase;protein_id=WP_000973360.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2204043 2204465 . + . ID=gene2183;Name=SH03_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10930;old_locus_tag=SH03_10935 NZ_CP010441.1 Protein Homology CDS 2204043 2204465 . + 0 ID=cds2119;Parent=gene2183;Dbxref=Genbank:WP_000018413.1;Name=WP_000018413.1;gbkey=CDS;product=acyl-CoA thioesterase;protein_id=WP_000018413.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2204465 2205670 . + . ID=gene2184;Name=SH03_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10935;old_locus_tag=SH03_10940 NZ_CP010441.1 Protein Homology CDS 2204465 2205670 . + 0 ID=cds2120;Parent=gene2184;Dbxref=Genbank:WP_001206197.1;Name=WP_001206197.1;Note=catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA;gbkey=CDS;product=3-oxoadipyl-CoA/3-oxo-5%2C6-dehydrosuberyl-CoA thiolase;protein_id=WP_001206197.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2205697 2207010 . + . ID=gene2185;Name=SH03_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10940;old_locus_tag=SH03_10945 NZ_CP010441.1 Protein Homology CDS 2205697 2207010 . + 0 ID=cds2121;Parent=gene2185;Dbxref=Genbank:WP_000632280.1;Name=WP_000632280.1;gbkey=CDS;product=phenylacetate-CoA ligase;protein_id=WP_000632280.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2207111 2208061 . + . ID=gene2186;Name=SH03_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10945;old_locus_tag=SH03_10950 NZ_CP010441.1 Protein Homology CDS 2207111 2208061 . + 0 ID=cds2122;Parent=gene2186;Dbxref=Genbank:WP_000039887.1;Name=WP_000039887.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000039887.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2208043 2208633 . + . ID=gene2187;Name=SH03_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10950;old_locus_tag=SH03_10955 NZ_CP010441.1 Protein Homology CDS 2208043 2208633 . + 0 ID=cds2123;Parent=gene2187;Dbxref=Genbank:WP_001123464.1;Name=WP_001123464.1;Note=involved in the synthesis of a cofactor required for carnitine dehydratase and carnitine racemase activities;gbkey=CDS;product=phenylacetic acid degradation protein PaaY;protein_id=WP_001123464.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2208964 2211489 . + . ID=gene2188;Name=SH03_RS10955;end_range=2211489,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS10955;partial=true;pseudo=true NZ_CP010441.1 Protein Homology CDS 2208964 2211489 . + 0 ID=cds2124;Parent=gene2188;end_range=2211489,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 2211481 2212815 . + . ID=id135;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 2211493 2212398 . - . ID=gene2189;Name=SH03_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10960;old_locus_tag=SH03_10965 NZ_CP010441.1 Protein Homology CDS 2211493 2212398 . - 0 ID=cds2125;Parent=gene2189;Dbxref=Genbank:WP_000376502.1;Name=WP_000376502.1;gbkey=CDS;product=integrase;protein_id=WP_000376502.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2212356 2212721 . - . ID=gene2190;Name=SH03_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10965;old_locus_tag=SH03_10970 NZ_CP010441.1 Protein Homology CDS 2212356 2212721 . - 0 ID=cds2126;Parent=gene2190;Dbxref=Genbank:WP_000567766.1;Name=WP_000567766.1;Note=represses IS2 gene transcription;gbkey=CDS;product=transposase;protein_id=WP_000567766.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 2212868 2214088 . + . ID=id136;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 2212930 2214081 . + . ID=gene2191;Name=SH03_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10970;old_locus_tag=SH03_10975 NZ_CP010441.1 Protein Homology CDS 2212930 2214081 . + 0 ID=cds2127;Parent=gene2191;Dbxref=Genbank:WP_001254932.1;Name=WP_001254932.1;gbkey=CDS;product=transposase;protein_id=WP_001254932.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2214262 2217585 . + . ID=gene2192;Name=SH03_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10975;old_locus_tag=SH03_10980 NZ_CP010441.1 Protein Homology CDS 2214262 2217585 . + 0 ID=cds2128;Parent=gene2192;Dbxref=Genbank:WP_001491951.1;Name=WP_001491951.1;gbkey=CDS;product=autotransporter subunit beta;protein_id=WP_001491951.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2217793 2218653 . + . ID=gene2193;Name=SH03_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10980;old_locus_tag=SH03_10985 NZ_CP010441.1 Protein Homology CDS 2217793 2218653 . + 0 ID=cds2129;Parent=gene2193;Dbxref=Genbank:WP_000097801.1;Name=WP_000097801.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_000097801.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2218716 2221022 . + . ID=gene2194;Name=SH03_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10985;old_locus_tag=SH03_10990 NZ_CP010441.1 Protein Homology CDS 2218716 2221022 . + 0 ID=cds2130;Parent=gene2194;Dbxref=Genbank:WP_000910026.1;Name=WP_000910026.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000910026.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2221193 2221798 . + . ID=gene2195;Name=SH03_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10990;old_locus_tag=SH03_10995 NZ_CP010441.1 Protein Homology CDS 2221193 2221798 . + 0 ID=cds2131;Parent=gene2195;Dbxref=Genbank:WP_000177515.1;Name=WP_000177515.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000177515.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2221798 2222694 . + . ID=gene2196;Name=SH03_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS10995;old_locus_tag=SH03_11000 NZ_CP010441.1 Protein Homology CDS 2221798 2222694 . + 0 ID=cds2132;Parent=gene2196;Dbxref=Genbank:WP_000890941.1;Name=WP_000890941.1;gbkey=CDS;product=CDP-diglyceride synthase;protein_id=WP_000890941.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2222710 2224467 . + . ID=gene2197;Name=SH03_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11000;old_locus_tag=SH03_11005 NZ_CP010441.1 Protein Homology CDS 2222710 2224467 . + 0 ID=cds2133;Parent=gene2197;Dbxref=Genbank:WP_000431845.1;Name=WP_000431845.1;gbkey=CDS;product=esterase;protein_id=WP_000431845.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2224457 2225773 . + . ID=gene2198;Name=SH03_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11005;old_locus_tag=SH03_11010 NZ_CP010441.1 Protein Homology CDS 2224457 2225773 . + 0 ID=cds2134;Parent=gene2198;Dbxref=Genbank:WP_000627368.1;Name=WP_000627368.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000627368.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2225827 2226432 . - . ID=gene2199;Name=SH03_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11010;old_locus_tag=SH03_11015 NZ_CP010441.1 Protein Homology CDS 2225827 2226432 . - 0 ID=cds2135;Parent=gene2199;Dbxref=Genbank:WP_000048950.1;Name=WP_000048950.1;Note=FMN-dependent%3B requires NADH%3B catalyzes the cleavage of azo bond in aromatic azo compounds;gbkey=CDS;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048950.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2226633 2230535 . + . ID=gene2200;Name=SH03_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11015;old_locus_tag=SH03_11020 NZ_CP010441.1 Protein Homology CDS 2226633 2230535 . + 0 ID=cds2136;Parent=gene2200;Dbxref=Genbank:WP_038432560.1;Name=WP_038432560.1;Note=involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain;gbkey=CDS;product=ATP-dependent RNA helicase HrpA;protein_id=WP_038432560.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2230807 2231607 . + . ID=gene2201;Name=SH03_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11020;old_locus_tag=SH03_11025 NZ_CP010441.1 Protein Homology CDS 2230807 2231607 . + 0 ID=cds2137;Parent=gene2201;Dbxref=Genbank:WP_001027942.1;Name=WP_001027942.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001027942.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2231804 2233243 . + . ID=gene2202;Name=SH03_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11025;old_locus_tag=SH03_11030 NZ_CP010441.1 Protein Homology CDS 2231804 2233243 . + 0 ID=cds2138;Parent=gene2202;Dbxref=Genbank:WP_000115943.1;Name=WP_000115943.1;Note=NAD-linked;gbkey=CDS;product=lactaldehyde dehydrogenase;protein_id=WP_000115943.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2233285 2233536 . - . ID=gene2203;Name=SH03_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11030;old_locus_tag=SH03_11035 NZ_CP010441.1 Protein Homology CDS 2233285 2233536 . - 0 ID=cds2139;Parent=gene2203;Dbxref=Genbank:WP_001310792.1;Name=WP_001310792.1;gbkey=CDS;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_001310792.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2233533 2233910 . - . ID=gene2204;Name=SH03_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11035;old_locus_tag=SH03_11040 NZ_CP010441.1 Protein Homology CDS 2233533 2233910 . - 0 ID=cds2140;Parent=gene2204;Dbxref=Genbank:WP_001326906.1;Name=WP_001326906.1;gbkey=CDS;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_001326906.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2234169 2234285 . - . ID=gene2205;Name=SH03_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11040;old_locus_tag=SH03_11045 NZ_CP010441.1 Protein Homology CDS 2234169 2234285 . - 0 ID=cds2141;Parent=gene2205;Dbxref=Genbank:WP_000048641.1;Name=WP_000048641.1;gbkey=CDS;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000048641.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2234474 2235004 . + . ID=gene2206;Name=SH03_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11045;old_locus_tag=SH03_11050 NZ_CP010441.1 Protein Homology CDS 2234474 2235004 . + 0 ID=cds2142;Parent=gene2206;Dbxref=Genbank:WP_000428998.1;Name=WP_000428998.1;Note=B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm;gbkey=CDS;product=cytochrome B561;protein_id=WP_000428998.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2235249 2235422 . + . ID=gene2207;Name=SH03_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11050;old_locus_tag=SH03_11055 NZ_CP010441.1 Protein Homology CDS 2235249 2235422 . + 0 ID=cds2143;Parent=gene2207;Dbxref=Genbank:WP_000731833.1;Name=WP_000731833.1;gbkey=CDS;product=periplasmic protein;protein_id=WP_000731833.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2235494 2235643 . - . ID=gene2208;Name=SH03_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11055;old_locus_tag=SH03_11060 NZ_CP010441.1 Protein Homology CDS 2235494 2235643 . - 0 ID=cds2144;Parent=gene2208;Dbxref=Genbank:WP_001320773.1;Name=WP_001320773.1;gbkey=CDS;product=protein HokB;protein_id=WP_001320773.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2236042 2237682 . + . ID=gene2209;Name=SH03_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11060;old_locus_tag=SH03_11065 NZ_CP010441.1 Protein Homology CDS 2236042 2237682 . + 0 ID=cds2145;Parent=gene2209;Dbxref=Genbank:WP_001098559.1;Name=WP_001098559.1;gbkey=CDS;product=methyl-accepting chemotaxis protein III;protein_id=WP_001098559.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2237720 2238643 . - . ID=gene2210;Name=SH03_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11065;old_locus_tag=SH03_11070 NZ_CP010441.1 Protein Homology CDS 2237720 2238643 . - 0 ID=cds2146;Parent=gene2210;Dbxref=Genbank:WP_000414567.1;Name=WP_000414567.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000414567.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2238860 2240203 . + . ID=gene2211;Name=SH03_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11070;old_locus_tag=SH03_11075 NZ_CP010441.1 Protein Homology CDS 2238860 2240203 . + 0 ID=cds2147;Parent=gene2211;Dbxref=Genbank:WP_000013789.1;Name=WP_000013789.1;gbkey=CDS;product=metalloenzyme;protein_id=WP_000013789.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2240464 2242083 . + . ID=gene2212;Name=mdoD;gbkey=Gene;gene=mdoD;gene_biotype=protein_coding;gene_synonym=opgD;locus_tag=SH03_RS11075;old_locus_tag=SH03_11080 NZ_CP010441.1 Protein Homology CDS 2240464 2242083 . + 0 ID=cds2148;Parent=gene2212;Dbxref=Genbank:WP_001301029.1;Name=WP_001301029.1;Note=involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans;gbkey=CDS;gene=mdoD;product=glucan biosynthesis protein D;protein_id=WP_001301029.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2242004 2242207 . - . ID=gene2213;Name=SH03_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11080;old_locus_tag=SH03_11085 NZ_CP010441.1 Protein Homology CDS 2242004 2242207 . - 0 ID=cds2149;Parent=gene2213;Dbxref=Genbank:WP_001303281.1;Name=WP_001303281.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001303281.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2242223 2242447 . + . ID=gene2214;Name=SH03_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11085;old_locus_tag=SH03_11090 NZ_CP010441.1 Protein Homology CDS 2242223 2242447 . + 0 ID=cds2150;Parent=gene2214;Dbxref=Genbank:WP_001296778.1;Name=WP_001296778.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001296778.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2242510 2243049 . + . ID=gene2215;Name=SH03_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11090;old_locus_tag=SH03_11095 NZ_CP010441.1 Protein Homology CDS 2242510 2243049 . + 0 ID=cds2151;Parent=gene2215;Dbxref=Genbank:WP_000140873.1;Name=WP_000140873.1;gbkey=CDS;product=ribosomal-protein-serine acetyltransferase;protein_id=WP_000140873.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2243041 2244021 . - . ID=gene2216;Name=SH03_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11095;old_locus_tag=SH03_11100 NZ_CP010441.1 Protein Homology CDS 2243041 2244021 . - 0 ID=cds2152;Parent=gene2216;Dbxref=Genbank:WP_001234042.1;Name=WP_001234042.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001234042.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2244133 2245137 . + . ID=gene2217;Name=SH03_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11100;old_locus_tag=SH03_11105 NZ_CP010441.1 Protein Homology CDS 2244133 2245137 . + 0 ID=cds2153;Parent=gene2217;Dbxref=Genbank:WP_001326905.1;Name=WP_001326905.1;gbkey=CDS;product=tellurite resistance protein TehA;protein_id=WP_001326905.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2245134 2245727 . + . ID=gene2218;Name=SH03_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11105;old_locus_tag=SH03_11110 NZ_CP010441.1 Protein Homology CDS 2245134 2245727 . + 0 ID=cds2154;Parent=gene2218;Dbxref=Genbank:WP_000586732.1;Name=WP_000586732.1;Note=with TehA confers resistance to tellurite;gbkey=CDS;product=tellurite methyltransferase;protein_id=WP_000586732.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2246029 2246697 . + . ID=gene2219;Name=SH03_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11110;old_locus_tag=SH03_11115 NZ_CP010441.1 Protein Homology CDS 2246029 2246697 . + 0 ID=cds2155;Parent=gene2219;Dbxref=Genbank:WP_001261013.1;Name=WP_001261013.1;gbkey=CDS;product=lipoprotein;protein_id=WP_001261013.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2246730 2246933 . + . ID=gene2220;Name=SH03_RS11115;end_range=2246933,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS11115;partial=true;pseudo=true;start_range=.,2246730 NZ_CP010441.1 Protein Homology CDS 2246730 2246933 . + 0 ID=cds2156;Parent=gene2220;end_range=2246933,.;gbkey=CDS;partial=true;product=TetR family transcriptional regulator;pseudo=true;start_range=.,2246730;transl_except=(pos:2246772..2246774%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq gene 2246934 2247221 . - . ID=gene2221;Name=SH03_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11120;old_locus_tag=SH03_11125 NZ_CP010441.1 Protein Homology CDS 2246934 2247221 . - 0 ID=cds2157;Parent=gene2221;Dbxref=Genbank:WP_000604906.1;Name=WP_000604906.1;gbkey=CDS;product=transposase;protein_id=WP_000604906.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2247289 2248437 . + . ID=gene2222;Name=SH03_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11125;old_locus_tag=SH03_11130 NZ_CP010441.1 Protein Homology CDS 2247289 2248437 . + 0 ID=cds2158;Parent=gene2222;Dbxref=Genbank:WP_001251043.1;Name=WP_001251043.1;gbkey=CDS;product=transposase;protein_id=WP_001251043.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2248477 2249652 . - . ID=gene2223;Name=SH03_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11130;old_locus_tag=SH03_11135 NZ_CP010441.1 Protein Homology CDS 2248477 2249652 . - 0 ID=cds2159;Parent=gene2223;Dbxref=Genbank:WP_001236265.1;Name=WP_001236265.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001236265.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2249744 2250280 . + . ID=gene2224;Name=SH03_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11135;old_locus_tag=SH03_11140 NZ_CP010441.1 Protein Homology CDS 2249744 2250280 . + 0 ID=cds2160;Parent=gene2224;Dbxref=Genbank:WP_000429155.1;Name=WP_000429155.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000429155.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2250353 2252314 . + . ID=gene2225;Name=SH03_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11140;old_locus_tag=SH03_11145 NZ_CP010441.1 Protein Homology CDS 2250353 2252314 . + 0 ID=cds2161;Parent=gene2225;Dbxref=Genbank:WP_001303492.1;Name=WP_001303492.1;gbkey=CDS;product=peptidase;protein_id=WP_001303492.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2252406 2252576 . - . ID=gene2226;Name=SH03_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11145;old_locus_tag=SH03_11150 NZ_CP010441.1 Protein Homology CDS 2252406 2252576 . - 0 ID=cds2162;Parent=gene2226;Dbxref=Genbank:WP_000907221.1;Name=WP_000907221.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000907221.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2252858 2253034 . + . ID=gene2227;Name=SH03_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11150;old_locus_tag=SH03_11155 NZ_CP010441.1 Protein Homology CDS 2252858 2253034 . + 0 ID=cds2163;Parent=gene2227;Dbxref=Genbank:WP_000813794.1;Name=WP_000813794.1;gbkey=CDS;product=mRNA interferase HicA;protein_id=WP_000813794.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2253059 2253496 . + . ID=gene2228;Name=SH03_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11155;old_locus_tag=SH03_11160 NZ_CP010441.1 Protein Homology CDS 2253059 2253496 . + 0 ID=cds2164;Parent=gene2228;Dbxref=Genbank:WP_001209405.1;Name=WP_001209405.1;gbkey=CDS;product=antitoxin;protein_id=WP_001209405.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2253575 2254981 . + . ID=gene2229;Name=SH03_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11160;old_locus_tag=SH03_11165 NZ_CP010441.1 Protein Homology CDS 2253575 2254981 . + 0 ID=cds2165;Parent=gene2229;Dbxref=Genbank:WP_000760626.1;Name=WP_000760626.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000760626.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2255226 2256371 . + . ID=gene2230;Name=SH03_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11165;old_locus_tag=SH03_11170 NZ_CP010441.1 Protein Homology CDS 2255226 2256371 . + 0 ID=cds2166;Parent=gene2230;Dbxref=Genbank:WP_000047424.1;Name=WP_000047424.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_000047424.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2256389 2257402 . + . ID=gene2231;Name=SH03_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11170;old_locus_tag=SH03_11175 NZ_CP010441.1 Protein Homology CDS 2256389 2257402 . + 0 ID=cds2167;Parent=gene2231;Dbxref=Genbank:WP_000220396.1;Name=WP_000220396.1;gbkey=CDS;product=ABC transporter ATPase;protein_id=WP_000220396.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2257403 2258344 . + . ID=gene2232;Name=SH03_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11175;old_locus_tag=SH03_11180 NZ_CP010441.1 Protein Homology CDS 2257403 2258344 . + 0 ID=cds2168;Parent=gene2232;Dbxref=Genbank:WP_001251304.1;Name=WP_001251304.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_001251304.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2258334 2259128 . + . ID=gene2233;Name=SH03_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11180;old_locus_tag=SH03_11185 NZ_CP010441.1 Protein Homology CDS 2258334 2259128 . + 0 ID=cds2169;Parent=gene2233;Dbxref=Genbank:WP_000555458.1;Name=WP_000555458.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_000555458.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2259150 2260574 . + . ID=gene2234;Name=SH03_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11185;old_locus_tag=SH03_11190 NZ_CP010441.1 Protein Homology CDS 2259150 2260574 . + 0 ID=cds2170;Parent=gene2234;Dbxref=Genbank:WP_001163872.1;Name=WP_001163872.1;Note=catalyzes the formation of 4-aminobutanoate from 4-aminobutanal%3B involved in putrescine degradation;gbkey=CDS;product=gamma-aminobutyraldehyde dehydrogenase;protein_id=WP_001163872.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2260605 2260802 . + . ID=gene2235;Name=SH03_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11190;old_locus_tag=SH03_11195 NZ_CP010441.1 Protein Homology CDS 2260605 2260802 . + 0 ID=cds2171;Parent=gene2235;Dbxref=Genbank:WP_023150035.1;Name=WP_023150035.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_023150035.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2260961 2261134 . + . ID=gene2236;Name=SH03_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11195;old_locus_tag=SH03_11200 NZ_CP010441.1 Protein Homology CDS 2260961 2261134 . + 0 ID=cds2172;Parent=gene2236;Dbxref=Genbank:WP_000061178.1;Name=WP_000061178.1;gbkey=CDS;product=DUF2566 domain-containing protein;protein_id=WP_000061178.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2261220 2261453 . + . ID=gene2237;Name=SH03_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11200;old_locus_tag=SH03_11205 NZ_CP010441.1 Protein Homology CDS 2261220 2261453 . + 0 ID=cds2173;Parent=gene2237;Dbxref=Genbank:WP_000018633.1;Name=WP_000018633.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000018633.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2261454 2261903 . - . ID=gene2238;Name=SH03_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11205;old_locus_tag=SH03_11210 NZ_CP010441.1 Protein Homology CDS 2261454 2261903 . - 0 ID=cds2174;Parent=gene2238;Dbxref=Genbank:WP_001076535.1;Name=WP_001076535.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001076535.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2261900 2262418 . - . ID=gene2239;Name=SH03_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11210;old_locus_tag=SH03_11215 NZ_CP010441.1 Protein Homology CDS 2261900 2262418 . - 0 ID=cds2175;Parent=gene2239;Dbxref=Genbank:WP_001310799.1;Name=WP_001310799.1;gbkey=CDS;product=L-amino acid N-acyltransferase MnaT;protein_id=WP_001310799.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2262599 2263636 . + . ID=gene2240;Name=SH03_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11215;old_locus_tag=SH03_11220 NZ_CP010441.1 Protein Homology CDS 2262599 2263636 . + 0 ID=cds2176;Parent=gene2240;Dbxref=Genbank:WP_000531462.1;Name=WP_000531462.1;gbkey=CDS;product=NADPH-dependent curcumin reductase;protein_id=WP_000531462.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2263834 2264499 . + . ID=gene2241;Name=SH03_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11220;old_locus_tag=SH03_11225 NZ_CP010441.1 Protein Homology CDS 2263834 2264499 . + 0 ID=cds2177;Parent=gene2241;Dbxref=Genbank:WP_001300742.1;Name=WP_001300742.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001300742.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2264535 2266637 . - . ID=gene2242;Name=SH03_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11225;old_locus_tag=SH03_11230 NZ_CP010441.1 Protein Homology CDS 2264535 2266637 . - 0 ID=cds2178;Parent=gene2242;Dbxref=Genbank:WP_000689363.1;Name=WP_000689363.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_000689363.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2266879 2267940 . + . ID=gene2243;Name=SH03_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11230;old_locus_tag=SH03_11235 NZ_CP010441.1 Protein Homology CDS 2266879 2267940 . + 0 ID=cds2179;Parent=gene2243;Dbxref=Genbank:WP_000550695.1;Name=WP_000550695.1;gbkey=CDS;product=ATP-binding protein%2C periplasmic%2C function unknown;protein_id=WP_000550695.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2268053 2269552 . - . ID=gene2244;Name=SH03_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11235;old_locus_tag=SH03_11240 NZ_CP010441.1 Protein Homology CDS 2268053 2269552 . - 0 ID=cds2180;Parent=gene2244;Dbxref=Genbank:WP_001300590.1;Name=WP_001300590.1;Note=involved in the transporte of L-asparagine;gbkey=CDS;product=L-asparagine permease;protein_id=WP_001300590.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2269819 2270436 . + . ID=gene2245;Name=SH03_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11240;old_locus_tag=SH03_11245 NZ_CP010441.1 Protein Homology CDS 2269819 2270436 . + 0 ID=cds2181;Parent=gene2245;Dbxref=Genbank:WP_000598857.1;Name=WP_000598857.1;gbkey=CDS;product=glutathione S-transferase;protein_id=WP_000598857.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2270512 2270724 . + . ID=gene2246;Name=SH03_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11245;old_locus_tag=SH03_11250 NZ_CP010441.1 Protein Homology CDS 2270512 2270724 . + 0 ID=cds2182;Parent=gene2246;Dbxref=Genbank:WP_000226995.1;Name=WP_000226995.1;gbkey=CDS;product=IPR020099 family protein;protein_id=WP_000226995.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 2271516 2273023 . + . ID=id137;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 2271711 2273510 . + . ID=gene2247;Name=SH03_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11250;old_locus_tag=SH03_11255 NZ_CP010441.1 Protein Homology CDS 2271711 2273510 . + 0 ID=cds2183;Parent=gene2247;Dbxref=Genbank:WP_042405549.1;Name=WP_042405549.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_042405549.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2273494 2273976 . + . ID=gene2248;Name=SH03_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11255;old_locus_tag=SH03_11260 NZ_CP010441.1 Protein Homology CDS 2273494 2273976 . + 0 ID=cds2184;Parent=gene2248;Dbxref=Genbank:WP_000939263.1;Name=WP_000939263.1;gbkey=CDS;product=immunity protein for RhsE;protein_id=WP_000939263.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2274158 2274904 . + . ID=gene2249;Name=SH03_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11260;old_locus_tag=SH03_11265 NZ_CP010441.1 Protein Homology CDS 2274158 2274904 . + 0 ID=cds2185;Parent=gene2249;Dbxref=Genbank:WP_001310803.1;Name=WP_001310803.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001310803.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 2275244 2276534 . + . ID=id138;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 2275388 2276524 . + . ID=gene2250;Name=SH03_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11265;old_locus_tag=SH03_11270 NZ_CP010441.1 Protein Homology CDS 2275388 2276524 . + 0 ID=cds2186;Parent=gene2250;Dbxref=Genbank:WP_000421020.1;Name=WP_000421020.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000421020.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2276624 2276857 . + . ID=gene2251;Name=SH03_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11270;old_locus_tag=SH03_11275 NZ_CP010441.1 Protein Homology CDS 2276624 2276857 . + 0 ID=cds2187;Parent=gene2251;Dbxref=Genbank:WP_001120143.1;Name=WP_001120143.1;Note=4-OT%3B member of subfamily 5%3B forms a dimer%3B the function in the Escherichia coli cell is unknown;gbkey=CDS;product=tautomerase PptA;protein_id=WP_001120143.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2276854 2277423 . - . ID=gene2252;Name=SH03_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11275;old_locus_tag=SH03_11280 NZ_CP010441.1 Protein Homology CDS 2276854 2277423 . - 0 ID=cds2188;Parent=gene2252;Dbxref=Genbank:WP_000085899.1;Name=WP_000085899.1;gbkey=CDS;product=flavin reductase like-protein;protein_id=WP_000085899.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2277596 2278441 . + . ID=gene2253;Name=SH03_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11280;old_locus_tag=SH03_11285 NZ_CP010441.1 Protein Homology CDS 2277596 2278441 . + 0 ID=cds2189;Parent=gene2253;Dbxref=Genbank:WP_000187925.1;Name=WP_000187925.1;Note=catalyzes the addition of the acetyl moity of acetyl-CoA to an N-hydroxy-arylamine to form an N-acetoxyarylamine;gbkey=CDS;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_000187925.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2278537 2279430 . - . ID=gene2254;Name=SH03_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11285;old_locus_tag=SH03_11290 NZ_CP010441.1 Protein Homology CDS 2278537 2279430 . - 0 ID=cds2190;Parent=gene2254;Dbxref=Genbank:WP_000804385.1;Name=WP_000804385.1;gbkey=CDS;product=PhzC-PhzF family protein;protein_id=WP_000804385.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2279509 2280189 . - . ID=gene2255;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=SH03_RS11290;old_locus_tag=SH03_11295 NZ_CP010441.1 Protein Homology CDS 2279509 2280189 . - 0 ID=cds2191;Parent=gene2255;Dbxref=Genbank:WP_000617115.1;Name=WP_000617115.1;Note=with NarGJH catalyzes the reduction of nitrate%3B the gamma subunit localizes NarGHI to the membrane%3B one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high;gbkey=CDS;gene=narI;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617115.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2280186 2280881 . - . ID=gene2256;Name=SH03_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11295;old_locus_tag=SH03_11300 NZ_CP010441.1 Protein Homology CDS 2280186 2280881 . - 0 ID=cds2192;Parent=gene2256;Dbxref=Genbank:WP_001166353.1;Name=WP_001166353.1;Note=delta subunit of nitrate reductase 1%3B chaperone for the insertion of the molybdenum cofactor and assembly of nitrate reductase 1;gbkey=CDS;product=nitrate reductase molybdenum cofactor assembly chaperone NarW;protein_id=WP_001166353.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2280881 2282425 . - . ID=gene2257;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=SH03_RS11300;old_locus_tag=SH03_11305 NZ_CP010441.1 Protein Homology CDS 2280881 2282425 . - 0 ID=cds2193;Parent=gene2257;Dbxref=Genbank:WP_000702535.1;Name=WP_000702535.1;Note=with NarGJI catalyzes the reduction of nitrate%3B the beta subunit is an iron sulfur cluster containing electron transfer subunit%3B one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high;gbkey=CDS;gene=narH;product=nitrate reductase subunit beta;protein_id=WP_000702535.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2282422 2286162 . - . ID=gene2258;Name=narZ;gbkey=Gene;gene=narZ;gene_biotype=protein_coding;locus_tag=SH03_RS11305;old_locus_tag=SH03_11310 NZ_CP010441.1 Protein Homology CDS 2282422 2286162 . - 0 ID=cds2194;Parent=gene2258;Dbxref=Genbank:WP_000040458.1;Name=WP_000040458.1;Note=with NarYV catalyzes the reduction of nitrate%3B the beta subunit is an iron sulfur cluster containing electron transfer subunit%3B one of 3 nitrate reductases in E. coli%3B expression of nitrate reductase Z is not dependent on nitrate levels;gbkey=CDS;gene=narZ;product=respiratory nitrate reductase 2 alpha chain;protein_id=WP_000040458.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2286244 2287632 . - . ID=gene2259;Name=SH03_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11310;old_locus_tag=SH03_11315 NZ_CP010441.1 Protein Homology CDS 2286244 2287632 . - 0 ID=cds2195;Parent=gene2259;Dbxref=Genbank:WP_001207901.1;Name=WP_001207901.1;Note=involved in the transport of nitrate and nitrite;gbkey=CDS;product=nitrate/nitrite transporter NarU;protein_id=WP_001207901.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2287956 2289286 . - . ID=gene2260;Name=SH03_RS11315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS11315;pseudo=true NZ_CP010441.1 Protein Homology CDS 2287956 2289286 . - 0 ID=cds2196;Parent=gene2260;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 2289310 2289600 . - . ID=gene2261;Name=SH03_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11320;old_locus_tag=SH03_11325 NZ_CP010441.1 Protein Homology CDS 2289310 2289600 . - 0 ID=cds2197;Parent=gene2261;Dbxref=Genbank:WP_000768384.1;Name=WP_000768384.1;gbkey=CDS;product=lipoprotein;protein_id=WP_000768384.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2289860 2290684 . - . ID=gene2262;Name=SH03_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11325;old_locus_tag=SH03_11330 NZ_CP010441.1 Protein Homology CDS 2289860 2290684 . - 0 ID=cds2198;Parent=gene2262;Dbxref=Genbank:WP_001340254.1;Name=WP_001340254.1;gbkey=CDS;product=aromatic amino acid exporter;protein_id=WP_001340254.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2290973 2291560 . + . ID=gene2263;Name=SH03_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11330;old_locus_tag=SH03_11335 NZ_CP010441.1 Protein Homology CDS 2290973 2291560 . + 0 ID=cds2199;Parent=gene2263;Dbxref=Genbank:WP_000383354.1;Name=WP_000383354.1;gbkey=CDS;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_000383354.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2291609 2294020 . + . ID=gene2264;Name=SH03_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11335;old_locus_tag=SH03_11340 NZ_CP010441.1 Protein Homology CDS 2291609 2294020 . + 0 ID=cds2200;Parent=gene2264;Dbxref=Genbank:WP_000181668.1;Name=WP_000181668.1;gbkey=CDS;product=formate dehydrogenase subunit alpha;protein_id=WP_000181668.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2294033 2294917 . + . ID=gene2265;Name=SH03_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11340;old_locus_tag=SH03_11345 NZ_CP010441.1 Protein Homology CDS 2294033 2294917 . + 0 ID=cds2201;Parent=gene2265;Dbxref=Genbank:WP_038432563.1;Name=WP_038432563.1;Note=beta subunit%3B involved in the use of formate as an electron donor during aerobic respiration%3B acts to transfer electrons from the major(alpha subunit) to the cytochrome b556(gamma subunit);gbkey=CDS;product=formate dehydrogenase;protein_id=WP_038432563.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2294910 2295563 . + . ID=gene2266;Name=SH03_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11345;old_locus_tag=SH03_11350 NZ_CP010441.1 Protein Homology CDS 2294910 2295563 . + 0 ID=cds2202;Parent=gene2266;Dbxref=Genbank:WP_000045648.1;Name=WP_000045648.1;Note=cytochrome b556(FDO) component%3B heme containing;gbkey=CDS;product=formate dehydrogenase nitrate-inducible cytochrome b556(Fdn) subunit;protein_id=WP_000045648.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 2295586 2295761 . + . ID=id139;gbkey=repeat_region NZ_CP010441.1 RefSeq repeat_region 2295764 2295939 . + . ID=id140;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 2295970 2296254 . - . ID=gene2267;Name=SH03_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11350;old_locus_tag=SH03_11355 NZ_CP010441.1 Protein Homology CDS 2295970 2296254 . - 0 ID=cds2203;Parent=gene2267;Dbxref=Genbank:WP_000781370.1;Name=WP_000781370.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000781370.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2296400 2297410 . - . ID=gene2268;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;gene_synonym=adhA;locus_tag=SH03_RS11355;old_locus_tag=SH03_11360 NZ_CP010441.1 Protein Homology CDS 2296400 2297410 . - 0 ID=cds2204;Parent=gene2268;Dbxref=Genbank:WP_038432566.1;Name=WP_038432566.1;Note=similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs;gbkey=CDS;gene=adhP;product=ethanol-active dehydrogenase/acetaldehyde-active reductase;protein_id=WP_038432566.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2297544 2299241 . - . ID=gene2269;Name=SH03_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11360;old_locus_tag=SH03_11365 NZ_CP010441.1 Protein Homology CDS 2297544 2299241 . - 0 ID=cds2205;Parent=gene2269;Dbxref=Genbank:WP_000433476.1;Name=WP_000433476.1;gbkey=CDS;product=NAD-dependent malic enzyme;protein_id=WP_000433476.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2299397 2299534 . - . ID=gene2270;Name=rpsV;gbkey=Gene;gene=rpsV;gene_biotype=protein_coding;gene_synonym=sra;locus_tag=SH03_RS11365;old_locus_tag=SH03_11370 NZ_CP010441.1 Protein Homology CDS 2299397 2299534 . - 0 ID=cds2206;Parent=gene2270;Dbxref=Genbank:WP_000841554.1;Name=WP_000841554.1;Note=protein D%3B stationary-phase-induced ribosome-associated%3B in Escherichia coli this protein becomes associated with the ribosome%3B expression increases during stationary phase;gbkey=CDS;gene=rpsV;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841554.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2299636 2299851 . - . ID=gene2271;Name=SH03_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11370;old_locus_tag=SH03_11375 NZ_CP010441.1 Protein Homology CDS 2299636 2299851 . - 0 ID=cds2207;Parent=gene2271;Dbxref=Genbank:WP_000495771.1;Name=WP_000495771.1;gbkey=CDS;product=protein bdm;protein_id=WP_000495771.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2300196 2300627 . + . ID=gene2272;Name=SH03_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11375;old_locus_tag=SH03_11380 NZ_CP010441.1 Protein Homology CDS 2300196 2300627 . + 0 ID=cds2208;Parent=gene2272;Dbxref=Genbank:WP_000152305.1;Name=WP_000152305.1;gbkey=CDS;product=peroxiredoxin OsmC;protein_id=WP_000152305.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2300683 2301609 . - . ID=gene2273;Name=SH03_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11380;old_locus_tag=SH03_11385 NZ_CP010441.1 Protein Homology CDS 2300683 2301609 . - 0 ID=cds2209;Parent=gene2273;Dbxref=Genbank:WP_001285536.1;Name=WP_001285536.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_001285536.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2301602 2302588 . - . ID=gene2274;Name=SH03_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11385;old_locus_tag=SH03_11390 NZ_CP010441.1 Protein Homology CDS 2301602 2302588 . - 0 ID=cds2210;Parent=gene2274;Dbxref=Genbank:WP_000193547.1;Name=WP_000193547.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_000193547.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2302585 2303481 . - . ID=gene2275;Name=SH03_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11390;old_locus_tag=SH03_11395 NZ_CP010441.1 Protein Homology CDS 2302585 2303481 . - 0 ID=cds2211;Parent=gene2275;Dbxref=Genbank:WP_000979626.1;Name=WP_000979626.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_000979626.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2303478 2304500 . - . ID=gene2276;Name=SH03_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11395;old_locus_tag=SH03_11400 NZ_CP010441.1 Protein Homology CDS 2303478 2304500 . - 0 ID=cds2212;Parent=gene2276;Dbxref=Genbank:WP_000145123.1;Name=WP_000145123.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_000145123.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2304502 2306052 . - . ID=gene2277;Name=SH03_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11400;old_locus_tag=SH03_11405 NZ_CP010441.1 Protein Homology CDS 2304502 2306052 . - 0 ID=cds2213;Parent=gene2277;Dbxref=Genbank:WP_000830550.1;Name=WP_000830550.1;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_000830550.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2306066 2306647 . - . ID=gene2278;Name=SH03_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11405;old_locus_tag=SH03_11410 NZ_CP010441.1 Protein Homology CDS 2306066 2306647 . - 0 ID=cds2214;Parent=gene2278;Dbxref=Genbank:WP_001285833.1;Name=WP_001285833.1;Note=catalyzes the hydrolysis of D-alanyl-D-alanine dipeptide: Zn dependent%3B involved in peptidoglycan synthesis;gbkey=CDS;product=D-alanyl-D-alanine dipeptidase;protein_id=WP_001285833.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2306905 2309328 . - . ID=gene2279;Name=SH03_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11410;old_locus_tag=SH03_11415 NZ_CP010441.1 Protein Homology CDS 2306905 2309328 . - 0 ID=cds2215;Parent=gene2279;Dbxref=Genbank:WP_001248237.1;Name=WP_001248237.1;Note=heme-regulated phosphodiesterase with phosphodiesterase activity with cGMP%3B cold- and stationary phase-induced bioflim regulator%3B oxygen sensor;gbkey=CDS;product=diguanylate phosphodiesterase;protein_id=WP_001248237.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2309329 2310711 . - . ID=gene2280;Name=SH03_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11415;old_locus_tag=SH03_11420 NZ_CP010441.1 Protein Homology CDS 2309329 2310711 . - 0 ID=cds2216;Parent=gene2280;Dbxref=Genbank:WP_000426292.1;Name=WP_000426292.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_000426292.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2311075 2312229 . - . ID=gene2281;Name=SH03_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11420;old_locus_tag=SH03_11425 NZ_CP010441.1 Protein Homology CDS 2311075 2312229 . - 0 ID=cds2217;Parent=gene2281;Dbxref=Genbank:WP_001324546.1;Name=WP_001324546.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001324546.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2312525 2314060 . - . ID=gene2282;Name=SH03_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11425;old_locus_tag=SH03_11430 NZ_CP010441.1 Protein Homology CDS 2312525 2314060 . - 0 ID=cds2218;Parent=gene2282;Dbxref=Genbank:WP_000246019.1;Name=WP_000246019.1;gbkey=CDS;product=glutamate/gamma-aminobutyrate antiporter;protein_id=WP_000246019.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 2314212 2315583 . + . ID=id141;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 2314216 2315616 . - . ID=gene2283;Name=SH03_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11430;old_locus_tag=SH03_11435 NZ_CP010441.1 Protein Homology CDS 2314216 2315616 . - 0 ID=cds2219;Parent=gene2283;Dbxref=Genbank:WP_000358930.1;Name=WP_000358930.1;gbkey=CDS;product=glutamate decarboxylase beta;protein_id=WP_000358930.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2315627 2315725 . - . ID=gene2284;Name=SH03_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11435;old_locus_tag=SH03_11440 NZ_CP010441.1 Protein Homology CDS 2315627 2315725 . - 0 ID=cds2220;Parent=gene2284;Dbxref=Genbank:WP_032083229.1;Name=WP_032083229.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032083229.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2315978 2318761 . - . ID=gene2285;Name=SH03_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11440;old_locus_tag=SH03_11445 NZ_CP010441.1 Protein Homology CDS 2315978 2318761 . - 0 ID=cds2221;Parent=gene2285;Dbxref=Genbank:WP_001244968.1;Name=WP_001244968.1;gbkey=CDS;product=zinc protease;protein_id=WP_001244968.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2318818 2321190 . - . ID=gene2286;Name=SH03_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11445;old_locus_tag=SH03_11450 NZ_CP010441.1 Protein Homology CDS 2318818 2321190 . - 0 ID=cds2222;Parent=gene2286;Dbxref=Genbank:WP_000832437.1;Name=WP_000832437.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_000832437.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2321228 2322913 . - . ID=gene2287;Name=SH03_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11450;old_locus_tag=SH03_11455 NZ_CP010441.1 Protein Homology CDS 2321228 2322913 . - 0 ID=cds2223;Parent=gene2287;Dbxref=Genbank:WP_000628576.1;Name=WP_000628576.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_000628576.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2323204 2324361 . - . ID=gene2288;Name=SH03_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11455;old_locus_tag=SH03_11460 NZ_CP010441.1 Protein Homology CDS 2323204 2324361 . - 0 ID=cds2224;Parent=gene2288;Dbxref=Genbank:WP_001301030.1;Name=WP_001301030.1;gbkey=CDS;product=anaerobic sulfatase maturase;protein_id=WP_001301030.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2324413 2326095 . - . ID=gene2289;Name=SH03_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11460;old_locus_tag=SH03_11465 NZ_CP010441.1 Protein Homology CDS 2324413 2326095 . - 0 ID=cds2225;Parent=gene2289;Dbxref=Genbank:WP_001295684.1;Name=WP_001295684.1;gbkey=CDS;product=Ser-type periplasmic non-aryl sulfatase;protein_id=WP_001295684.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2326497 2327258 . - . ID=gene2290;Name=SH03_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11465;old_locus_tag=SH03_11470 NZ_CP010441.1 Protein Homology CDS 2326497 2327258 . - 0 ID=cds2226;Parent=gene2290;Dbxref=Genbank:WP_000060495.1;Name=WP_000060495.1;Note=regulates the cellular response to acid resistance;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000060495.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2327333 2327530 . - . ID=gene2291;Name=SH03_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11470;old_locus_tag=SH03_11475 NZ_CP010441.1 Protein Homology CDS 2327333 2327530 . - 0 ID=cds2227;Parent=gene2291;Dbxref=Genbank:WP_000543384.1;Name=WP_000543384.1;gbkey=CDS;product=two-component-system connector protein SafA;protein_id=WP_000543384.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2327778 2330057 . - . ID=gene2292;Name=SH03_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11475;old_locus_tag=SH03_11480 NZ_CP010441.1 Protein Homology CDS 2327778 2330057 . - 0 ID=cds2228;Parent=gene2292;Dbxref=Genbank:WP_000726691.1;Name=WP_000726691.1;Note=in Escherichia coli it may be involved in repression of type III secretion system (TTSS) genes of the host cell%3B involved with increased resistance to low pH%3B member of the prokaryotic molybdopterin-containing oxidoreductase family;gbkey=CDS;product=hypothetical protein;protein_id=WP_000726691.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2330391 2331305 . - . ID=gene2293;Name=SH03_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11480;old_locus_tag=SH03_11485 NZ_CP010441.1 Protein Homology CDS 2330391 2331305 . - 0 ID=cds2229;Parent=gene2293;Dbxref=Genbank:WP_000520676.1;Name=WP_000520676.1;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=WP_000520676.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2331364 2331867 . - . ID=gene2294;Name=SH03_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11485;old_locus_tag=SH03_11490 NZ_CP010441.1 Protein Homology CDS 2331364 2331867 . - 0 ID=cds2230;Parent=gene2294;Dbxref=Genbank:WP_000825452.1;Name=WP_000825452.1;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=WP_000825452.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2331880 2332410 . - . ID=gene2295;Name=SH03_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11490;old_locus_tag=SH03_11495 NZ_CP010441.1 Protein Homology CDS 2331880 2332410 . - 0 ID=cds2231;Parent=gene2295;Dbxref=Genbank:WP_000876763.1;Name=WP_000876763.1;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=WP_000876763.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2332424 2333572 . - . ID=gene2296;Name=SH03_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11495;old_locus_tag=SH03_11500 NZ_CP010441.1 Protein Homology CDS 2332424 2333572 . - 0 ID=cds2232;Parent=gene2296;Dbxref=Genbank:WP_000017447.1;Name=WP_000017447.1;gbkey=CDS;product=fimbrial protein FimD;protein_id=WP_000017447.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2333928 2334107 . - . ID=gene2297;Name=SH03_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11500;old_locus_tag=SH03_11505 NZ_CP010441.1 Protein Homology CDS 2333928 2334107 . - 0 ID=cds2233;Parent=gene2297;Dbxref=Genbank:WP_001310818.1;Name=WP_001310818.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001310818.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2334425 2335747 . - . ID=gene2298;Name=SH03_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11505;old_locus_tag=SH03_11510 NZ_CP010441.1 Protein Homology CDS 2334425 2335747 . - 0 ID=cds2234;Parent=gene2298;Dbxref=Genbank:WP_001125439.1;Name=WP_001125439.1;gbkey=CDS;product=serine/threonine protein kinase;protein_id=WP_001125439.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2335747 2336013 . - . ID=gene2299;Name=SH03_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11510;old_locus_tag=SH03_11515 NZ_CP010441.1 Protein Homology CDS 2335747 2336013 . - 0 ID=cds2235;Parent=gene2299;Dbxref=Genbank:WP_001301023.1;Name=WP_001301023.1;gbkey=CDS;product=antitoxin HipB;protein_id=WP_001301023.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2336236 2337636 . - . ID=gene2300;Name=SH03_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11515;old_locus_tag=SH03_11520 NZ_CP010441.1 Protein Homology CDS 2336236 2337636 . - 0 ID=cds2236;Parent=gene2300;Dbxref=Genbank:WP_001083595.1;Name=WP_001083595.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001083595.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2337680 2341657 . - . ID=gene2301;Name=SH03_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11520;old_locus_tag=SH03_11525 NZ_CP010441.1 Protein Homology CDS 2337680 2341657 . - 0 ID=cds2237;Parent=gene2301;Dbxref=Genbank:WP_011443591.1;Name=WP_011443591.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011443591.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2342188 2343780 . - . ID=gene2302;Name=SH03_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11525;old_locus_tag=SH03_11530 NZ_CP010441.1 Protein Homology CDS 2342188 2343780 . - 0 ID=cds2238;Parent=gene2302;Dbxref=Genbank:WP_000113108.1;Name=WP_000113108.1;gbkey=CDS;product=autoinducer 2 kinase LsrK;protein_id=WP_000113108.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2343859 2344812 . - . ID=gene2303;Name=SH03_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11530;old_locus_tag=SH03_11535 NZ_CP010441.1 Protein Homology CDS 2343859 2344812 . - 0 ID=cds2239;Parent=gene2303;Dbxref=Genbank:WP_038432569.1;Name=WP_038432569.1;Note=regulates the transcription of lsr genes%3B involved in autoinducer 2 uptake%2C biofilm formation and stress responses;gbkey=CDS;product=LsrR family transcriptional regulator;protein_id=WP_038432569.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2345061 2346596 . + . ID=gene2304;Name=SH03_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11535;old_locus_tag=SH03_11540 NZ_CP010441.1 Protein Homology CDS 2345061 2346596 . + 0 ID=cds2240;Parent=gene2304;Dbxref=Genbank:WP_001194860.1;Name=WP_001194860.1;gbkey=CDS;product=autoinducer 2 import ATP-binding protein LsrA;protein_id=WP_001194860.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2346590 2347618 . + . ID=gene2305;Name=SH03_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11540;old_locus_tag=SH03_11545 NZ_CP010441.1 Protein Homology CDS 2346590 2347618 . + 0 ID=cds2241;Parent=gene2305;Dbxref=Genbank:WP_000911184.1;Name=WP_000911184.1;Note=with LsrADB is involved in the transport of autoindiuce 2;gbkey=CDS;product=autoinducer 2 import system permease LsrC;protein_id=WP_000911184.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2347618 2348610 . + . ID=gene2306;Name=SH03_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11545;old_locus_tag=SH03_11550 NZ_CP010441.1 Protein Homology CDS 2347618 2348610 . + 0 ID=cds2242;Parent=gene2306;Dbxref=Genbank:WP_001222721.1;Name=WP_001222721.1;gbkey=CDS;product=autoinducer 2 import system permease LsrD;protein_id=WP_001222721.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2348622 2349644 . + . ID=gene2307;Name=SH03_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11550;old_locus_tag=SH03_11555 NZ_CP010441.1 Protein Homology CDS 2348622 2349644 . + 0 ID=cds2243;Parent=gene2307;Dbxref=Genbank:WP_000172465.1;Name=WP_000172465.1;Note=with lsrACD is involved in the transport of autoinducer 2 into the cell;gbkey=CDS;product=autoinducer 2-binding protein LsrB;protein_id=WP_000172465.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2349671 2350546 . + . ID=gene2308;Name=SH03_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11555;old_locus_tag=SH03_11560 NZ_CP010441.1 Protein Homology CDS 2349671 2350546 . + 0 ID=cds2244;Parent=gene2308;Dbxref=Genbank:WP_000774165.1;Name=WP_000774165.1;Note=involved in autoinducer 2 transport and processing;gbkey=CDS;product=autoinducer-2 (AI-2) aldolase;protein_id=WP_000774165.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2350570 2350860 . + . ID=gene2309;Name=SH03_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11560;old_locus_tag=SH03_11565 NZ_CP010441.1 Protein Homology CDS 2350570 2350860 . + 0 ID=cds2245;Parent=gene2309;Dbxref=Genbank:WP_000558527.1;Name=WP_000558527.1;gbkey=CDS;product=autoinducer 2-degrading protein LsrG;protein_id=WP_000558527.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2350917 2351675 . + . ID=gene2310;Name=SH03_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11565;old_locus_tag=SH03_11570 NZ_CP010441.1 Protein Homology CDS 2350917 2351675 . + 0 ID=cds2246;Parent=gene2310;Dbxref=Genbank:WP_001286597.1;Name=WP_001286597.1;Note=catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate;gbkey=CDS;product=trans-aconitate 2-methyltransferase;protein_id=WP_001286597.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2351679 2352593 . - . ID=gene2311;Name=SH03_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11570;old_locus_tag=SH03_11575 NZ_CP010441.1 Protein Homology CDS 2351679 2352593 . - 0 ID=cds2247;Parent=gene2311;Dbxref=Genbank:WP_038432571.1;Name=WP_038432571.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038432571.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2352543 2352743 . + . ID=gene2312;Name=SH03_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11575 NZ_CP010441.1 Protein Homology CDS 2352543 2352743 . + 0 ID=cds2248;Parent=gene2312;Dbxref=Genbank:WP_001326603.1;Name=WP_001326603.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001326603.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2352800 2354251 . - . ID=gene2313;Name=SH03_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11580;old_locus_tag=SH03_11585 NZ_CP010441.1 Protein Homology CDS 2352800 2354251 . - 0 ID=cds2249;Parent=gene2313;Dbxref=Genbank:WP_000854633.1;Name=WP_000854633.1;Note=catalyzes the formation of D-tagaturonate from D-altronate;gbkey=CDS;product=altronate oxidoreductase;protein_id=WP_000854633.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2354478 2355425 . - . ID=gene2314;Name=SH03_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11585;old_locus_tag=SH03_11590 NZ_CP010441.1 Protein Homology CDS 2354478 2355425 . - 0 ID=cds2250;Parent=gene2314;Dbxref=Genbank:WP_000878968.1;Name=WP_000878968.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_000878968.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2355537 2355896 . - . ID=gene2315;Name=SH03_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11590;old_locus_tag=SH03_11595 NZ_CP010441.1 Protein Homology CDS 2355537 2355896 . - 0 ID=cds2251;Parent=gene2315;Dbxref=Genbank:WP_001191027.1;Name=WP_001191027.1;gbkey=CDS;product=DUF4186 domain-containing protein;protein_id=WP_001191027.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2355896 2356822 . - . ID=gene2316;Name=SH03_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11595;old_locus_tag=SH03_11600 NZ_CP010441.1 Protein Homology CDS 2355896 2356822 . - 0 ID=cds2252;Parent=gene2316;Dbxref=Genbank:WP_000257409.1;Name=WP_000257409.1;Note=catalyzes the formation of glutamate from glutamine;gbkey=CDS;product=glutaminase 2;protein_id=WP_000257409.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2356886 2358274 . - . ID=gene2317;Name=SH03_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11600;old_locus_tag=SH03_11605 NZ_CP010441.1 Protein Homology CDS 2356886 2358274 . - 0 ID=cds2253;Parent=gene2317;Dbxref=Genbank:WP_000156615.1;Name=WP_000156615.1;gbkey=CDS;product=succinate semialdehyde dehydrogenase [NAD(P)+] Sad;protein_id=WP_000156615.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2358375 2359256 . + . ID=gene2318;Name=SH03_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11605;old_locus_tag=SH03_11610 NZ_CP010441.1 Protein Homology CDS 2358375 2359256 . + 0 ID=cds2254;Parent=gene2318;Dbxref=Genbank:WP_000366501.1;Name=WP_000366501.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000366501.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2359334 2360449 . + . ID=gene2319;Name=SH03_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11610;old_locus_tag=SH03_11615 NZ_CP010441.1 Protein Homology CDS 2359334 2360449 . + 0 ID=cds2255;Parent=gene2319;Dbxref=Genbank:WP_000258599.1;Name=WP_000258599.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000258599.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2360599 2361789 . + . ID=gene2320;Name=SH03_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11615;old_locus_tag=SH03_11620 NZ_CP010441.1 Protein Homology CDS 2360599 2361789 . + 0 ID=cds2256;Parent=gene2320;Dbxref=Genbank:WP_000210799.1;Name=WP_000210799.1;gbkey=CDS;product=sugar efflux transporter;protein_id=WP_000210799.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2361814 2362479 . - . ID=gene2321;Name=SH03_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11620;old_locus_tag=SH03_11625 NZ_CP010441.1 Protein Homology CDS 2361814 2362479 . - 0 ID=cds2257;Parent=gene2321;Dbxref=Genbank:WP_000885033.1;Name=WP_000885033.1;gbkey=CDS;product=membrane protein;protein_id=WP_000885033.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2362691 2363125 . + . ID=gene2322;Name=SH03_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11625;old_locus_tag=SH03_11630 NZ_CP010441.1 Protein Homology CDS 2362691 2363125 . + 0 ID=cds2258;Parent=gene2322;Dbxref=Genbank:WP_000843414.1;Name=WP_000843414.1;Note=Repressor of the marRAB operon which is involved in the activation of both antibiotic resistance and oxidative stress genes;gbkey=CDS;product=MarR family transcriptional regulator;protein_id=WP_000843414.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2363139 2363528 . + . ID=gene2323;Name=SH03_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11630;old_locus_tag=SH03_11635 NZ_CP010441.1 Protein Homology CDS 2363139 2363528 . + 0 ID=cds2259;Parent=gene2323;Dbxref=Genbank:WP_001307812.1;Name=WP_001307812.1;Note=transcriptional activator of genes involved in the multiple antibiotic resistance (Mar) phenotype%3B also activates sodA%2C zwf and micF;gbkey=CDS;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_001307812.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2363560 2363778 . + . ID=gene2324;Name=SH03_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11635;old_locus_tag=SH03_11640 NZ_CP010441.1 Protein Homology CDS 2363560 2363778 . + 0 ID=cds2260;Parent=gene2324;Dbxref=Genbank:WP_000803657.1;Name=WP_000803657.1;gbkey=CDS;product=multiple antibiotic resistance protein MarB;protein_id=WP_000803657.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2363809 2364708 . - . ID=gene2325;Name=SH03_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11640;old_locus_tag=SH03_11645 NZ_CP010441.1 Protein Homology CDS 2363809 2364708 . - 0 ID=cds2261;Parent=gene2325;Dbxref=Genbank:WP_000087187.1;Name=WP_000087187.1;gbkey=CDS;product=amino acid metabolite efflux pump;protein_id=WP_000087187.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2364903 2366090 . + . ID=gene2326;Name=SH03_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11645;old_locus_tag=SH03_11650 NZ_CP010441.1 Protein Homology CDS 2364903 2366090 . + 0 ID=cds2262;Parent=gene2326;Dbxref=Genbank:WP_001054204.1;Name=WP_001054204.1;Note=YdeF%3B uncharacterized member of the major facilitator superfamily (MFS) of transporters;gbkey=CDS;product=transporter;protein_id=WP_001054204.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2366217 2366312 . + . ID=gene2327;Name=SH03_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11650;old_locus_tag=SH03_11655 NZ_CP010441.1 Protein Homology CDS 2366217 2366312 . + 0 ID=cds2263;Parent=gene2327;Dbxref=Genbank:WP_000901367.1;Name=WP_000901367.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000901367.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2366531 2367421 . - . ID=gene2328;Name=SH03_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11655;old_locus_tag=SH03_11660 NZ_CP010441.1 Protein Homology CDS 2366531 2367421 . - 0 ID=cds2264;Parent=gene2328;Dbxref=Genbank:WP_000592814.1;Name=WP_000592814.1;Note=required for pgaD induction;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_000592814.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2367676 2368068 . - . ID=gene2329;Name=SH03_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11660;old_locus_tag=SH03_11665 NZ_CP010441.1 Protein Homology CDS 2367676 2368068 . - 0 ID=cds2265;Parent=gene2329;Dbxref=Genbank:WP_000671737.1;Name=WP_000671737.1;gbkey=CDS;product=hydrogen peroxide resistance protein;protein_id=WP_000671737.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2368344 2368862 . + . ID=gene2330;Name=SH03_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11665;old_locus_tag=SH03_11670 NZ_CP010441.1 Protein Homology CDS 2368344 2368862 . + 0 ID=cds2266;Parent=gene2330;Dbxref=Genbank:WP_001024746.1;Name=WP_001024746.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001024746.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2368906 2370951 . - . ID=gene2331;Name=SH03_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11670;old_locus_tag=SH03_11675 NZ_CP010441.1 Protein Homology CDS 2368906 2370951 . - 0 ID=cds2267;Parent=gene2331;Dbxref=Genbank:WP_000210373.1;Name=WP_000210373.1;gbkey=CDS;product=peptidyl-dipeptidase dcp;protein_id=WP_000210373.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2371088 2371834 . + . ID=gene2332;Name=SH03_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11675;old_locus_tag=SH03_11680 NZ_CP010441.1 Protein Homology CDS 2371088 2371834 . + 0 ID=cds2268;Parent=gene2332;Dbxref=Genbank:WP_000636571.1;Name=WP_000636571.1;Note=NADP(+)-dependent%3B catalyzes the formation of 3-hydroxypropionate from the toxic malonic semialdehyde%2C catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine%3B can also use 3-hydroxybutyrate%2C 3-hydroxy-isobutyrate%2C D-threonine%2C L-allo-threonine%2CD-serine;gbkey=CDS;product=NADP-dependent 3-hydroxy acid dehydrogenase YdfG;protein_id=WP_000636571.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2371923 2372609 . + . ID=gene2333;Name=SH03_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11680;old_locus_tag=SH03_11685 NZ_CP010441.1 Protein Homology CDS 2371923 2372609 . + 0 ID=cds2269;Parent=gene2333;Dbxref=Genbank:WP_000215549.1;Name=WP_000215549.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000215549.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2372786 2372989 . + . ID=gene2334;Name=SH03_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11685;old_locus_tag=SH03_11690 NZ_CP010441.1 Protein Homology CDS 2372786 2372989 . + 0 ID=cds2270;Parent=gene2334;Dbxref=Genbank:WP_000214712.1;Name=WP_000214712.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000214712.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2373024 2374484 . - . ID=gene2335;Name=SH03_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11690;old_locus_tag=SH03_11695 NZ_CP010441.1 Protein Homology CDS 2373024 2374484 . - 0 ID=cds2271;Parent=gene2335;Dbxref=Genbank:WP_000527743.1;Name=WP_000527743.1;gbkey=CDS;product=NAD-dependent D-mannonate oxidoreductase;protein_id=WP_000527743.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2374573 2375856 . - . ID=gene2336;Name=SH03_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11695;old_locus_tag=SH03_11700 NZ_CP010441.1 Protein Homology CDS 2374573 2375856 . - 0 ID=cds2272;Parent=gene2336;Dbxref=Genbank:WP_000347482.1;Name=WP_000347482.1;gbkey=CDS;product=transporter;protein_id=WP_000347482.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 2376104 2378641 . + . ID=id142;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 2376643 2376876 . + . ID=gene2337;Name=SH03_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11700;old_locus_tag=SH03_11705 NZ_CP010441.1 Protein Homology CDS 2376643 2376876 . + 0 ID=cds2273;Parent=gene2337;Dbxref=Genbank:WP_000836770.1;Name=WP_000836770.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_000836770.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2377193 2377783 . + . ID=gene2338;Name=SH03_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11705;old_locus_tag=SH03_11710 NZ_CP010441.1 Protein Homology CDS 2377193 2377783 . + 0 ID=cds2274;Parent=gene2338;Dbxref=Genbank:WP_000078177.1;Name=WP_000078177.1;gbkey=CDS;product=Qin prophage%3B site-specific recombinase;protein_id=WP_000078177.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2377881 2378456 . - . ID=gene2339;Name=SH03_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11710;old_locus_tag=SH03_11715 NZ_CP010441.1 Protein Homology CDS 2377881 2378456 . - 0 ID=cds2275;Parent=gene2339;Dbxref=Genbank:WP_000885611.1;Name=WP_000885611.1;gbkey=CDS;product=Tail fiber assembly protein homolog from lambdoid prophage Qin;protein_id=WP_000885611.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2378456 2379418 . - . ID=gene2340;Name=SH03_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11715;old_locus_tag=SH03_11720 NZ_CP010441.1 Protein Homology CDS 2378456 2379418 . - 0 ID=cds2276;Parent=gene2340;Dbxref=Genbank:WP_001027733.1;Name=WP_001027733.1;gbkey=CDS;product=Side tail fiber protein homolog from lambdoid prophage Qin;protein_id=WP_001027733.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 2378841 2379145 . + . ID=id143;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 2379369 2379938 . - . ID=gene2341;Name=SH03_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11720;old_locus_tag=SH03_11725 NZ_CP010441.1 Protein Homology CDS 2379369 2379938 . - 0 ID=cds2277;Parent=gene2341;Dbxref=Genbank:WP_000453612.1;Name=WP_000453612.1;gbkey=CDS;product=protein convertase;protein_id=WP_000453612.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 2379410 2380463 . + . ID=id144;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 2380327 2380560 . + . ID=gene2342;Name=SH03_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11725;old_locus_tag=SH03_11730 NZ_CP010441.1 Protein Homology CDS 2380327 2380560 . + 0 ID=cds2278;Parent=gene2342;Dbxref=Genbank:WP_001368374.1;Name=WP_001368374.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001368374.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2380618 2381028 . + . ID=gene2343;Name=SH03_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11730;old_locus_tag=SH03_11735 NZ_CP010441.1 Protein Homology CDS 2380618 2381028 . + 0 ID=cds2279;Parent=gene2343;Dbxref=Genbank:WP_000373090.1;Name=WP_000373090.1;gbkey=CDS;product=Qin prophage%3B uncharacterized protein;protein_id=WP_000373090.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2381180 2381353 . - . ID=gene2344;Name=SH03_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11735;old_locus_tag=SH03_11740 NZ_CP010441.1 Protein Homology CDS 2381180 2381353 . - 0 ID=cds2280;Parent=gene2344;Dbxref=Genbank:WP_001019606.1;Name=WP_001019606.1;gbkey=CDS;product=protein GnsB;protein_id=WP_001019606.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2381525 2381701 . - . ID=gene2345;Name=SH03_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11740;old_locus_tag=SH03_11745 NZ_CP010441.1 Protein Homology CDS 2381525 2381701 . - 0 ID=cds2281;Parent=gene2345;Dbxref=Genbank:WP_012304871.1;Name=WP_012304871.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304871.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2382026 2382238 . - . ID=gene2346;Name=SH03_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11745;old_locus_tag=SH03_11750 NZ_CP010441.1 Protein Homology CDS 2382026 2382238 . - 0 ID=cds2282;Parent=gene2346;Dbxref=Genbank:WP_000066495.1;Name=WP_000066495.1;gbkey=CDS;product=cold-shock protein CspI;protein_id=WP_000066495.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2382601 2383098 . - . ID=gene2347;Name=SH03_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11750;old_locus_tag=SH03_11755 NZ_CP010441.1 Protein Homology CDS 2382601 2383098 . - 0 ID=cds2283;Parent=gene2347;Dbxref=Genbank:WP_001071769.1;Name=WP_001071769.1;gbkey=CDS;product=Rz-like protein%2C Qin prophage;protein_id=WP_001071769.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2383095 2383628 . - . ID=gene2348;Name=SH03_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11755;old_locus_tag=SH03_11760 NZ_CP010441.1 Protein Homology CDS 2383095 2383628 . - 0 ID=cds2284;Parent=gene2348;Dbxref=Genbank:WP_001092971.1;Name=WP_001092971.1;gbkey=CDS;product=lysozyme from lambdoid prophage Qin;protein_id=WP_001092971.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2383625 2383936 . - . ID=gene2349;Name=SH03_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11760;old_locus_tag=SH03_11765 NZ_CP010441.1 Protein Homology CDS 2383625 2383936 . - 0 ID=cds2285;Parent=gene2349;Dbxref=Genbank:WP_000189916.1;Name=WP_000189916.1;gbkey=CDS;product=Qin prophage%3B uncharacterized protein;protein_id=WP_000189916.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2383941 2384156 . - . ID=gene2350;Name=SH03_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11765;old_locus_tag=SH03_11770 NZ_CP010441.1 Protein Homology CDS 2383941 2384156 . - 0 ID=cds2286;Parent=gene2350;Dbxref=Genbank:WP_000839590.1;Name=WP_000839590.1;gbkey=CDS;product=Lysis protein S homolog from lambdoid prophage Qin;protein_id=WP_000839590.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2384910 2385125 . - . ID=gene2351;Name=SH03_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11770;old_locus_tag=SH03_11775 NZ_CP010441.1 Protein Homology CDS 2384910 2385125 . - 0 ID=cds2287;Parent=gene2351;Dbxref=Genbank:WP_000066484.1;Name=WP_000066484.1;gbkey=CDS;product=cold-shock protein CspB;protein_id=WP_000066484.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2385426 2385638 . + . ID=gene2352;Name=SH03_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11775;old_locus_tag=SH03_11780 NZ_CP010441.1 Protein Homology CDS 2385426 2385638 . + 0 ID=cds2288;Parent=gene2352;Dbxref=Genbank:WP_000087756.1;Name=WP_000087756.1;gbkey=CDS;product=cold-shock protein CspF;protein_id=WP_000087756.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2386060 2386812 . - . ID=gene2353;Name=SH03_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11780;old_locus_tag=SH03_11785 NZ_CP010441.1 Protein Homology CDS 2386060 2386812 . - 0 ID=cds2289;Parent=gene2353;Dbxref=Genbank:WP_001047135.1;Name=WP_001047135.1;gbkey=CDS;product=Antitermination protein Q homolog from lambdoid prophage Qin;protein_id=WP_001047135.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2386826 2387875 . - . ID=gene2354;Name=SH03_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11785;old_locus_tag=SH03_11790 NZ_CP010441.1 Protein Homology CDS 2386826 2387875 . - 0 ID=cds2290;Parent=gene2354;Dbxref=Genbank:WP_001265198.1;Name=WP_001265198.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001265198.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2387877 2388155 . - . ID=gene2355;Name=SH03_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11790;old_locus_tag=SH03_11795 NZ_CP010441.1 Protein Homology CDS 2387877 2388155 . - 0 ID=cds2291;Parent=gene2355;Dbxref=Genbank:WP_012304870.1;Name=WP_012304870.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304870.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2388222 2388473 . - . ID=gene2356;Name=SH03_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11795;old_locus_tag=SH03_11800 NZ_CP010441.1 Protein Homology CDS 2388222 2388473 . - 0 ID=cds2292;Parent=gene2356;Dbxref=Genbank:WP_000980994.1;Name=WP_000980994.1;gbkey=CDS;product=Qin prophage%3B uncharacterized protein;protein_id=WP_000980994.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2388690 2388845 . - . ID=gene2357;Name=SH03_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11800;old_locus_tag=SH03_11805 NZ_CP010441.1 Protein Homology CDS 2388690 2388845 . - 0 ID=cds2293;Parent=gene2357;Dbxref=Genbank:WP_000813254.1;Name=WP_000813254.1;gbkey=CDS;product=protein HokD;protein_id=WP_000813254.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2388917 2389204 . - . ID=gene2358;Name=SH03_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11805;old_locus_tag=SH03_11810 NZ_CP010441.1 Protein Homology CDS 2388917 2389204 . - 0 ID=cds2294;Parent=gene2358;Dbxref=Genbank:WP_000323025.1;Name=WP_000323025.1;gbkey=CDS;product=mRNA interferase RelE;protein_id=WP_000323025.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2389204 2389443 . - . ID=gene2359;Name=SH03_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11810;old_locus_tag=SH03_11815 NZ_CP010441.1 Protein Homology CDS 2389204 2389443 . - 0 ID=cds2295;Parent=gene2359;Dbxref=Genbank:WP_000534858.1;Name=WP_000534858.1;Note=Qin prophage%3B bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/transcriptional repressor;gbkey=CDS;product=antitoxin RelB;protein_id=WP_000534858.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2389976 2390308 . + . ID=gene2360;Name=SH03_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11815;old_locus_tag=SH03_11820 NZ_CP010441.1 Protein Homology CDS 2389976 2390308 . + 0 ID=cds2296;Parent=gene2360;Dbxref=Genbank:WP_001301033.1;Name=WP_001301033.1;gbkey=CDS;product=protein FlxA;protein_id=WP_001301033.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2390910 2391207 . - . ID=gene2361;Name=SH03_RS11820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS11820;partial=true;pseudo=true;start_range=.,2390910 NZ_CP010441.1 Protein Homology CDS 2390910 2391207 . - 0 ID=cds2297;Parent=gene2361;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2390910;transl_table=11 NZ_CP010441.1 RefSeq gene 2391191 2391421 . - . ID=gene2362;Name=SH03_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11825;old_locus_tag=SH03_11830 NZ_CP010441.1 Protein Homology CDS 2391191 2391421 . - 0 ID=cds2298;Parent=gene2362;Dbxref=Genbank:WP_000920568.1;Name=WP_000920568.1;gbkey=CDS;product=repressor protein of division inhibition gene dicB;protein_id=WP_000920568.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2391505 2391912 . + . ID=gene2363;Name=SH03_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11830;old_locus_tag=SH03_11835 NZ_CP010441.1 Protein Homology CDS 2391505 2391912 . + 0 ID=cds2299;Parent=gene2363;Dbxref=Genbank:WP_000448564.1;Name=WP_000448564.1;Note=The transcriptional repressor of DicA (divison cell) has a hypothetical DNA binding domain. It represses the transcription of dicB and dicC%2C but its specific role in cellular replication and mode of action are still unknown.;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000448564.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2392079 2392234 . + . ID=gene2364;Name=SH03_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11835;old_locus_tag=SH03_11840 NZ_CP010441.1 Protein Homology CDS 2392079 2392234 . + 0 ID=cds2300;Parent=gene2364;Dbxref=Genbank:WP_000379575.1;Name=WP_000379575.1;gbkey=CDS;product=Qin prophage%3B uncharacterized protein;protein_id=WP_000379575.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2392394 2392612 . + . ID=gene2365;Name=SH03_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11840;old_locus_tag=SH03_11845 NZ_CP010441.1 Protein Homology CDS 2392394 2392612 . + 0 ID=cds2301;Parent=gene2365;Dbxref=Genbank:WP_001171942.1;Name=WP_001171942.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001171942.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2392616 2392909 . - . ID=gene2366;Name=SH03_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11845;old_locus_tag=SH03_11850 NZ_CP010441.1 Protein Homology CDS 2392616 2392909 . - 0 ID=cds2302;Parent=gene2366;Dbxref=Genbank:WP_032243558.1;Name=WP_032243558.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032243558.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2393180 2393368 . + . ID=gene2367;Name=SH03_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11850;old_locus_tag=SH03_11855 NZ_CP010441.1 Protein Homology CDS 2393180 2393368 . + 0 ID=cds2303;Parent=gene2367;Dbxref=Genbank:WP_000854559.1;Name=WP_000854559.1;gbkey=CDS;product=division inhibition protein DicB;protein_id=WP_000854559.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2393365 2393556 . + . ID=gene2368;Name=SH03_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11855;old_locus_tag=SH03_11860 NZ_CP010441.1 Protein Homology CDS 2393365 2393556 . + 0 ID=cds2304;Parent=gene2368;Dbxref=Genbank:WP_038432577.1;Name=WP_038432577.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038432577.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2393868 2394179 . - . ID=gene2369;Name=SH03_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11860;old_locus_tag=SH03_11865 NZ_CP010441.1 Protein Homology CDS 2393868 2394179 . - 0 ID=cds2305;Parent=gene2369;Dbxref=Genbank:WP_024181921.1;Name=WP_024181921.1;gbkey=CDS;product=cell surface protein;protein_id=WP_024181921.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2394383 2395108 . + . ID=gene2370;Name=SH03_RS11865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS11865;partial=true;pseudo=true;start_range=.,2394383 NZ_CP010441.1 Protein Homology CDS 2394383 2395108 . + 0 ID=cds2306;Parent=gene2370;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,2394383;transl_except=(pos:2394401..2394403%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq repeat_region 2394414 2395120 . + . ID=id145;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 2395083 2396279 . + . ID=gene2371;Name=SH03_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11870;old_locus_tag=SH03_11875 NZ_CP010441.1 Protein Homology CDS 2395083 2396279 . + 0 ID=cds2307;Parent=gene2371;Dbxref=Genbank:WP_000627182.1;Name=WP_000627182.1;gbkey=CDS;product=integrase;protein_id=WP_000627182.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2396467 2397486 . - . ID=gene2372;Name=SH03_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11875;old_locus_tag=SH03_11880 NZ_CP010441.1 Protein Homology CDS 2396467 2397486 . - 0 ID=cds2308;Parent=gene2372;Dbxref=Genbank:WP_000836066.1;Name=WP_000836066.1;gbkey=CDS;product=starvation-sensing protein RspB;protein_id=WP_000836066.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2397498 2398712 . - . ID=gene2373;Name=SH03_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11880;old_locus_tag=SH03_11885 NZ_CP010441.1 Protein Homology CDS 2397498 2398712 . - 0 ID=cds2309;Parent=gene2373;Dbxref=Genbank:WP_001295394.1;Name=WP_001295394.1;Note=starvation-sensing protein%3B maybe involved in homoserine lactone degradation;gbkey=CDS;product=starvation-sensing protein RspA;protein_id=WP_001295394.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2398918 2399244 . - . ID=gene2374;Name=SH03_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11885;old_locus_tag=SH03_11890 NZ_CP010441.1 Protein Homology CDS 2398918 2399244 . - 0 ID=cds2310;Parent=gene2374;Dbxref=Genbank:WP_000598292.1;Name=WP_000598292.1;gbkey=CDS;product=membrane protein;protein_id=WP_000598292.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2399379 2399720 . + . ID=gene2375;Name=SH03_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11890;old_locus_tag=SH03_11895 NZ_CP010441.1 Protein Homology CDS 2399379 2399720 . + 0 ID=cds2311;Parent=gene2375;Dbxref=Genbank:WP_000705211.1;Name=WP_000705211.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000705211.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2399755 2400315 . + . ID=gene2376;Name=SH03_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11895;old_locus_tag=SH03_11900 NZ_CP010441.1 Protein Homology CDS 2399755 2400315 . + 0 ID=cds2312;Parent=gene2376;Dbxref=Genbank:WP_001138581.1;Name=WP_001138581.1;Note=catalyzes the formation of N(1)- and N(8)-acetylspermidine from spermidine;gbkey=CDS;product=spermidine N(1)-acetyltransferase;protein_id=WP_001138581.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2400318 2401064 . - . ID=gene2377;Name=SH03_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11900;old_locus_tag=SH03_11905 NZ_CP010441.1 Protein Homology CDS 2400318 2401064 . - 0 ID=cds2313;Parent=gene2377;Dbxref=Genbank:WP_000571984.1;Name=WP_000571984.1;gbkey=CDS;product=lipoprotein;protein_id=WP_000571984.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2401136 2401441 . + . ID=gene2378;Name=SH03_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11905;old_locus_tag=SH03_11910 NZ_CP010441.1 Protein Homology CDS 2401136 2401441 . + 0 ID=cds2314;Parent=gene2378;Dbxref=Genbank:WP_001300836.1;Name=WP_001300836.1;gbkey=CDS;product=DUF1161 domain-containing protein;protein_id=WP_001300836.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2401640 2404066 . + . ID=gene2379;Name=SH03_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11910;old_locus_tag=SH03_11915 NZ_CP010441.1 Protein Homology CDS 2401640 2404066 . + 0 ID=cds2315;Parent=gene2379;Dbxref=Genbank:WP_000041675.1;Name=WP_000041675.1;gbkey=CDS;product=selenate reductase periplasmic;protein_id=WP_000041675.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2404154 2406550 . + . ID=gene2380;Name=SH03_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11915;old_locus_tag=SH03_11920 NZ_CP010441.1 Protein Homology CDS 2404154 2406550 . + 0 ID=cds2316;Parent=gene2380;Dbxref=Genbank:WP_001299397.1;Name=WP_001299397.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit A;protein_id=WP_001299397.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2406561 2407178 . + . ID=gene2381;Name=SH03_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11920;old_locus_tag=SH03_11925 NZ_CP010441.1 Protein Homology CDS 2406561 2407178 . + 0 ID=cds2317;Parent=gene2381;Dbxref=Genbank:WP_000213028.1;Name=WP_000213028.1;Note=oxidoreductase%2C Fe-S subunit%3B terminal electron transfer protein for the reduction of DMSO;gbkey=CDS;product=dimethyl sulfoxide reductase;protein_id=WP_000213028.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2407180 2408034 . + . ID=gene2382;Name=SH03_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11925;old_locus_tag=SH03_11930 NZ_CP010441.1 Protein Homology CDS 2407180 2408034 . + 0 ID=cds2318;Parent=gene2382;Dbxref=Genbank:WP_000526503.1;Name=WP_000526503.1;gbkey=CDS;product=dimethyl sulfoxide reductase;protein_id=WP_000526503.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2408077 2408691 . + . ID=gene2383;Name=SH03_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11930;old_locus_tag=SH03_11935 NZ_CP010441.1 Protein Homology CDS 2408077 2408691 . + 0 ID=cds2319;Parent=gene2383;Dbxref=Genbank:WP_000148710.1;Name=WP_000148710.1;Note=binds to the twin-arginine signal peptides of certain proteins%2C including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane;gbkey=CDS;product=Tat proofreading chaperone DmsD;protein_id=WP_000148710.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2408886 2410142 . + . ID=gene2384;Name=SH03_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11935;old_locus_tag=SH03_11940 NZ_CP010441.1 Protein Homology CDS 2408886 2410142 . + 0 ID=cds2320;Parent=gene2384;Dbxref=Genbank:WP_001350514.1;Name=WP_001350514.1;gbkey=CDS;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_001350514.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2410095 2410790 . - . ID=gene2385;Name=SH03_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11940;old_locus_tag=SH03_11945 NZ_CP010441.1 Protein Homology CDS 2410095 2410790 . - 0 ID=cds2321;Parent=gene2385;Dbxref=Genbank:WP_000919231.1;Name=WP_000919231.1;Note=DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium;gbkey=CDS;product=ATP-dependent dethiobiotin synthetase BioD 2;protein_id=WP_000919231.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2410915 2412135 . - . ID=gene2386;Name=SH03_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11945;old_locus_tag=SH03_11950 NZ_CP010441.1 Protein Homology CDS 2410915 2412135 . - 0 ID=cds2322;Parent=gene2386;Dbxref=Genbank:WP_000225262.1;Name=WP_000225262.1;Note=mlc%2C controls the expression of genes involved in the phosphotransferase and phosphoenolpyruvate systems%2C regulates genes involved in the uptake of sugars;gbkey=CDS;product=protein mlc;protein_id=WP_000225262.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2412270 2413163 . - . ID=gene2387;Name=SH03_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11950;old_locus_tag=SH03_11955 NZ_CP010441.1 Protein Homology CDS 2412270 2413163 . - 0 ID=cds2323;Parent=gene2387;Dbxref=Genbank:WP_001019525.1;Name=WP_001019525.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_001019525.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2413270 2414523 . + . ID=gene2388;Name=SH03_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11955;old_locus_tag=SH03_11960 NZ_CP010441.1 Protein Homology CDS 2413270 2414523 . + 0 ID=cds2324;Parent=gene2388;Dbxref=Genbank:WP_000091840.1;Name=WP_000091840.1;gbkey=CDS;product=transporter;protein_id=WP_000091840.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2414920 2415255 . + . ID=gene2389;Name=SH03_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11960;old_locus_tag=SH03_11965 NZ_CP010441.1 Protein Homology CDS 2414920 2415255 . + 0 ID=cds2325;Parent=gene2389;Dbxref=Genbank:WP_038432580.1;Name=WP_038432580.1;Note=required for growth and survival under moderately acid conditions;gbkey=CDS;product=hypothetical protein;protein_id=WP_038432580.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2415348 2415431 . + . ID=gene2390;Name=SH03_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11965;old_locus_tag=SH03_11970 NZ_CP010441.1 Protein Homology CDS 2415348 2415431 . + 0 ID=cds2326;Parent=gene2390;Dbxref=Genbank:WP_000233093.1;Name=WP_000233093.1;gbkey=CDS;product=stationary phase-induced protein;protein_id=WP_000233093.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2415531 2416352 . + . ID=gene2391;Name=SH03_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11970;old_locus_tag=SH03_11975 NZ_CP010441.1 Protein Homology CDS 2415531 2416352 . + 0 ID=cds2327;Parent=gene2391;Dbxref=Genbank:WP_001260865.1;Name=WP_001260865.1;gbkey=CDS;product=peptidase;protein_id=WP_001260865.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2416391 2416720 . - . ID=gene2392;Name=SH03_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11975;old_locus_tag=SH03_11980 NZ_CP010441.1 Protein Homology CDS 2416391 2416720 . - 0 ID=cds2328;Parent=gene2392;Dbxref=Genbank:WP_000046661.1;Name=WP_000046661.1;Note=with MdtJ is involved in resistance to deoxycholate%2C nalidixic acid%2C fosfomycin%2C and SDS;gbkey=CDS;product=spermidine export protein MdtI;protein_id=WP_000046661.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2416707 2417072 . - . ID=gene2393;Name=SH03_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS11980;old_locus_tag=SH03_11985 NZ_CP010441.1 Protein Homology CDS 2416707 2417072 . - 0 ID=cds2329;Parent=gene2393;Dbxref=Genbank:WP_000276149.1;Name=WP_000276149.1;Note=with MdtI is involved in resistance to deoxycholate%2C nalidixic acid%2C fosfomycin%2C and SDS;gbkey=CDS;product=spermidine export protein MdtJ;protein_id=WP_000276149.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2417484 2418518 . + . ID=gene2394;Name=tqsA;gbkey=Gene;gene=tqsA;gene_biotype=protein_coding;gene_synonym=ydgG;locus_tag=SH03_RS11985;old_locus_tag=SH03_11990 NZ_CP010441.1 Protein Homology CDS 2417484 2418518 . + 0 ID=cds2330;Parent=gene2394;Dbxref=Genbank:WP_001118241.1;Name=WP_001118241.1;Note=transport of quorum-sensing signal%3B mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes;gbkey=CDS;gene=tqsA;product=AI-2 transporter TqsA;protein_id=WP_001118241.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2418543 2419931 . - . ID=gene2395;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=SH03_RS11990;old_locus_tag=SH03_11995 NZ_CP010441.1 Protein Homology CDS 2418543 2419931 . - 0 ID=cds2331;Parent=gene2395;Dbxref=Genbank:WP_000014036.1;Name=WP_000014036.1;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme;gbkey=CDS;gene=pntB;product=NAD(P) transhydrogenase subunit beta;protein_id=WP_000014036.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2419942 2421474 . - . ID=gene2396;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=SH03_RS11995;old_locus_tag=SH03_12000 NZ_CP010441.1 Protein Homology CDS 2419942 2421474 . - 0 ID=cds2332;Parent=gene2396;Dbxref=Genbank:WP_001300486.1;Name=WP_001300486.1;Note=forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm;gbkey=CDS;gene=pntA;product=NAD(P) transhydrogenase subunit alpha;protein_id=WP_001300486.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2421998 2422942 . + . ID=gene2397;Name=SH03_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12000;old_locus_tag=SH03_12005 NZ_CP010441.1 Protein Homology CDS 2421998 2422942 . + 0 ID=cds2333;Parent=gene2397;Dbxref=Genbank:WP_000769303.1;Name=WP_000769303.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000769303.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2423128 2424510 . + . ID=gene2398;Name=SH03_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12005;old_locus_tag=SH03_12010 NZ_CP010441.1 Protein Homology CDS 2423128 2424510 . + 0 ID=cds2334;Parent=gene2398;Dbxref=Genbank:WP_000412379.1;Name=WP_000412379.1;gbkey=CDS;product=arginine/ornithine antiporter transporter;protein_id=WP_000412379.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2424547 2425269 . + . ID=gene2399;Name=SH03_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12010;old_locus_tag=SH03_12015 NZ_CP010441.1 Protein Homology CDS 2424547 2425269 . + 0 ID=cds2335;Parent=gene2399;Dbxref=Genbank:WP_000520804.1;Name=WP_000520804.1;gbkey=CDS;product=dihydrofolate reductase FolM;protein_id=WP_000520804.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2425266 2425601 . - . ID=gene2400;Name=SH03_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12015;old_locus_tag=SH03_12020 NZ_CP010441.1 Protein Homology CDS 2425266 2425601 . - 0 ID=cds2336;Parent=gene2400;Dbxref=Genbank:WP_038432582.1;Name=WP_038432582.1;gbkey=CDS;product=membrane protein;protein_id=WP_038432582.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2425730 2426449 . + . ID=gene2401;Name=SH03_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12020;old_locus_tag=SH03_12025 NZ_CP010441.1 Protein Homology CDS 2425730 2426449 . + 0 ID=cds2337;Parent=gene2401;Dbxref=Genbank:WP_001092508.1;Name=WP_001092508.1;Note=response regulator in two-component regulatory system with RstB;gbkey=CDS;product=two-component system response regulator;protein_id=WP_001092508.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2426453 2427754 . + . ID=gene2402;Name=SH03_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12025;old_locus_tag=SH03_12030 NZ_CP010441.1 Protein Homology CDS 2426453 2427754 . + 0 ID=cds2338;Parent=gene2402;Dbxref=Genbank:WP_000732512.1;Name=WP_000732512.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_000732512.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2427830 2428759 . + . ID=gene2403;Name=SH03_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12030;old_locus_tag=SH03_12035 NZ_CP010441.1 Protein Homology CDS 2427830 2428759 . + 0 ID=cds2339;Parent=gene2403;Dbxref=Genbank:WP_000135181.1;Name=WP_000135181.1;Note=binds to DNA replication terminator sequences to prevent passage of replication forks;gbkey=CDS;product=DNA replication terminus site-binding protein;protein_id=WP_000135181.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2428756 2430159 . - . ID=gene2404;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=SH03_RS12035;old_locus_tag=SH03_12040 NZ_CP010441.1 Protein Homology CDS 2428756 2430159 . - 0 ID=cds2340;Parent=gene2404;Dbxref=Genbank:WP_001099085.1;Name=WP_001099085.1;Note=class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle;gbkey=CDS;gene=fumC;product=fumarate hydratase class II;protein_id=WP_001099085.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2430302 2431948 . - . ID=gene2405;Name=SH03_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12040;old_locus_tag=SH03_12045 NZ_CP010441.1 Protein Homology CDS 2430302 2431948 . - 0 ID=cds2341;Parent=gene2405;Dbxref=Genbank:WP_000066639.1;Name=WP_000066639.1;Note=catalyzes the formation of malate from fumerate;gbkey=CDS;product=fumarate hydratase class I%2C aerobic;protein_id=WP_000066639.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2432147 2433322 . + . ID=gene2406;Name=SH03_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12045;old_locus_tag=SH03_12050 NZ_CP010441.1 Protein Homology CDS 2432147 2433322 . + 0 ID=cds2342;Parent=gene2406;Dbxref=Genbank:WP_001170664.1;Name=WP_001170664.1;Note=catalyzes the formation of of fructose 6-phosphate from mannose 6-phosphate;gbkey=CDS;product=mannose-6-phosphate isomerase;protein_id=WP_001170664.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2433423 2434931 . + . ID=gene2407;Name=SH03_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12050;old_locus_tag=SH03_12055 NZ_CP010441.1 Protein Homology CDS 2433423 2434931 . + 0 ID=cds2343;Parent=gene2407;Dbxref=Genbank:WP_001043339.1;Name=WP_001043339.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001043339.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2435157 2436422 . - . ID=gene2408;Name=SH03_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12055;old_locus_tag=SH03_12060 NZ_CP010441.1 Protein Homology CDS 2435157 2436422 . - 0 ID=cds2344;Parent=gene2408;Dbxref=Genbank:WP_001227023.1;Name=WP_001227023.1;gbkey=CDS;product=porin;protein_id=WP_001227023.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2436461 2437834 . - . ID=gene2409;Name=SH03_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12060;old_locus_tag=SH03_12065 NZ_CP010441.1 Protein Homology CDS 2436461 2437834 . - 0 ID=cds2345;Parent=gene2409;Dbxref=Genbank:WP_001075849.1;Name=WP_001075849.1;gbkey=CDS;product=glucuronide carrier protein;protein_id=WP_001075849.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2437831 2439642 . - . ID=gene2410;Name=SH03_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12065;old_locus_tag=SH03_12070 NZ_CP010441.1 Protein Homology CDS 2437831 2439642 . - 0 ID=cds2346;Parent=gene2410;Dbxref=Genbank:WP_000945878.1;Name=WP_000945878.1;gbkey=CDS;product=beta-glucuronidase;protein_id=WP_000945878.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2440033 2440623 . - . ID=gene2411;Name=SH03_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12070;old_locus_tag=SH03_12075 NZ_CP010441.1 Protein Homology CDS 2440033 2440623 . - 0 ID=cds2347;Parent=gene2411;Dbxref=Genbank:WP_000969092.1;Name=WP_000969092.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000969092.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2440844 2441611 . - . ID=gene2412;Name=SH03_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12075;old_locus_tag=SH03_12080 NZ_CP010441.1 Protein Homology CDS 2440844 2441611 . - 0 ID=cds2348;Parent=gene2412;Dbxref=Genbank:WP_000483353.1;Name=WP_000483353.1;Note=Acts on the hydroxyl group at position 7 of the steroid frame;gbkey=CDS;product=7-alpha-hydroxysteroid dehydrogenase;protein_id=WP_000483353.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2441723 2442751 . - . ID=gene2413;Name=SH03_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12080;old_locus_tag=SH03_12085 NZ_CP010441.1 Protein Homology CDS 2441723 2442751 . - 0 ID=cds2349;Parent=gene2413;Dbxref=Genbank:WP_000179510.1;Name=WP_000179510.1;Note=regulates malXY which are involved in maltose-glucose transport;gbkey=CDS;product=maltose regulon regulatory protein MalI;protein_id=WP_000179510.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2442926 2444518 . + . ID=gene2414;Name=SH03_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12085;old_locus_tag=SH03_12090 NZ_CP010441.1 Protein Homology CDS 2442926 2444518 . + 0 ID=cds2350;Parent=gene2414;Dbxref=Genbank:WP_000125583.1;Name=WP_000125583.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%3B catalyzes the phosphorylation of maltose and glucose concomitant with their translocation across the cell membrane%3B component IIB catalyzes the phosphorylation of the sugar molecule%3B IIC forms the translocation channel and contains the substrate specific binding site;gbkey=CDS;product=PTS maltose- and glucose EIICB component;protein_id=WP_000125583.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2444528 2445700 . + . ID=gene2415;Name=SH03_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12090;old_locus_tag=SH03_12095 NZ_CP010441.1 Protein Homology CDS 2444528 2445700 . + 0 ID=cds2351;Parent=gene2415;Dbxref=Genbank:WP_000459379.1;Name=WP_000459379.1;Note=catalyzes the formation of homocysteine and pyruvate from cystathionine%3B also acts a a negative regulator for the mal regulon but interacting with the transcriptional activator MalT;gbkey=CDS;product=protein MalY;protein_id=WP_000459379.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2445804 2446805 . + . ID=gene2416;Name=SH03_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12095;old_locus_tag=SH03_12100 NZ_CP010441.1 Protein Homology CDS 2445804 2446805 . + 0 ID=cds2352;Parent=gene2416;Dbxref=Genbank:WP_000567490.1;Name=WP_000567490.1;gbkey=CDS;product=adenosine deaminase;protein_id=WP_000567490.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2446839 2447879 . - . ID=gene2417;Name=SH03_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12100;old_locus_tag=SH03_12105 NZ_CP010441.1 Protein Homology CDS 2446839 2447879 . - 0 ID=cds2353;Parent=gene2417;Dbxref=Genbank:WP_001282550.1;Name=WP_001282550.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_001282550.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2448122 2448247 . + . ID=gene2418;Name=SH03_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12105;old_locus_tag=SH03_12110 NZ_CP010441.1 Protein Homology CDS 2448122 2448247 . + 0 ID=cds2354;Parent=gene2418;Dbxref=Genbank:WP_001300888.1;Name=WP_001300888.1;gbkey=CDS;product=divisome-associated membrane protein Blr;protein_id=WP_001300888.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2448520 2448735 . + . ID=gene2419;Name=SH03_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12110;old_locus_tag=SH03_12115 NZ_CP010441.1 Protein Homology CDS 2448520 2448735 . + 0 ID=cds2355;Parent=gene2419;Dbxref=Genbank:WP_000217950.1;Name=WP_000217950.1;Note=YdgT%3B in E. coli%2C when complexed with H-NS or StpA binds a 26 base-pair DNA sequence of oriC%3B seems to play a role in optimizing the activity of oriC%3B non-essential%3B Hha protein paralog%3B in an hha mutant background%2C cnu is overexpressed and can compensate hha-induced phenotypes;gbkey=CDS;product=nucleoid-associated protein;protein_id=WP_000217950.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2448821 2449261 . + . ID=gene2420;Name=SH03_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12115;old_locus_tag=SH03_12120 NZ_CP010441.1 Protein Homology CDS 2448821 2449261 . + 0 ID=cds2356;Parent=gene2420;Dbxref=Genbank:WP_001310854.1;Name=WP_001310854.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001310854.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2449338 2449919 . + . ID=gene2421;Name=SH03_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12120;old_locus_tag=SH03_12125 NZ_CP010441.1 Protein Homology CDS 2449338 2449919 . + 0 ID=cds2357;Parent=gene2421;Dbxref=Genbank:WP_000133193.1;Name=WP_000133193.1;gbkey=CDS;product=electron transport complex subunit RsxA;protein_id=WP_000133193.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2449919 2450497 . + . ID=gene2422;Name=SH03_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12125;old_locus_tag=SH03_12130 NZ_CP010441.1 Protein Homology CDS 2449919 2450497 . + 0 ID=cds2358;Parent=gene2422;Dbxref=Genbank:WP_000991805.1;Name=WP_000991805.1;Note=part of membrane-bound complex thought to be involved in electron transport to nitrogen;gbkey=CDS;product=electron transport complex subunit RsxB;protein_id=WP_000991805.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2450490 2452712 . + . ID=gene2423;Name=SH03_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12130;old_locus_tag=SH03_12135 NZ_CP010441.1 Protein Homology CDS 2450490 2452712 . + 0 ID=cds2359;Parent=gene2423;Dbxref=Genbank:WP_000915778.1;Name=WP_000915778.1;Note=part of membrane-bound complex thought to be involved in electron transport to nitrogen;gbkey=CDS;product=electron transporter RsxC;protein_id=WP_000915778.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2452713 2453771 . + . ID=gene2424;Name=rnfD;gbkey=Gene;gene=rnfD;gene_biotype=protein_coding;locus_tag=SH03_RS12135;old_locus_tag=SH03_12140 NZ_CP010441.1 Protein Homology CDS 2452713 2453771 . + 0 ID=cds2360;Parent=gene2424;Dbxref=Genbank:WP_000231927.1;Name=WP_000231927.1;Note=RnfD%3B RsxD%3B required for nitrogen fixation in Rhodobacter capsulatus%3B part of a membrane-bound complex thought to be involved in electron transport to nitrogenase%3B in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents;gbkey=CDS;gene=rnfD;product=electron transport complex subunit RsxD;protein_id=WP_000231927.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2453775 2454395 . + . ID=gene2425;Name=SH03_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12140;old_locus_tag=SH03_12145 NZ_CP010441.1 Protein Homology CDS 2453775 2454395 . + 0 ID=cds2361;Parent=gene2425;Dbxref=Genbank:WP_000920784.1;Name=WP_000920784.1;Note=part of membrane-bound complex hought to be involved in electron transport to nitrogen;gbkey=CDS;product=electron transport complex subunit RsxG;protein_id=WP_000920784.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2454399 2455094 . + . ID=gene2426;Name=SH03_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12145;old_locus_tag=SH03_12150 NZ_CP010441.1 Protein Homology CDS 2454399 2455094 . + 0 ID=cds2362;Parent=gene2426;Dbxref=Genbank:WP_001289652.1;Name=WP_001289652.1;gbkey=CDS;product=electron transporter RsxE;protein_id=WP_001289652.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2455094 2455729 . + . ID=gene2427;Name=SH03_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12150;old_locus_tag=SH03_12155 NZ_CP010441.1 Protein Homology CDS 2455094 2455729 . + 0 ID=cds2363;Parent=gene2427;Dbxref=Genbank:WP_001030339.1;Name=WP_001030339.1;Note=DNA-(apurinic or apyrimidinic site) lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines;gbkey=CDS;product=endonuclease III;protein_id=WP_001030339.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2455857 2456057 . + . ID=gene2428;Name=SH03_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12155;old_locus_tag=SH03_12160 NZ_CP010441.1 Protein Homology CDS 2455857 2456057 . + 0 ID=cds2364;Parent=gene2428;Dbxref=Genbank:WP_001197983.1;Name=WP_001197983.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001197983.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2456340 2457842 . + . ID=gene2429;Name=tppB;gbkey=Gene;gene=tppB;gene_biotype=protein_coding;gene_synonym=ydgR;locus_tag=SH03_RS12160;old_locus_tag=SH03_12165 NZ_CP010441.1 Protein Homology CDS 2456340 2457842 . + 0 ID=cds2365;Parent=gene2429;Dbxref=Genbank:WP_000100932.1;Name=WP_000100932.1;Note=mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation;gbkey=CDS;gene=tppB;product=dipeptide and tripeptide permease A;protein_id=WP_000100932.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2457948 2458553 . + . ID=gene2430;Name=SH03_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12165;old_locus_tag=SH03_12170 NZ_CP010441.1 Protein Homology CDS 2457948 2458553 . + 0 ID=cds2366;Parent=gene2430;Dbxref=Genbank:WP_000765749.1;Name=WP_000765749.1;gbkey=CDS;product=glutathione S-transferase;protein_id=WP_000765749.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2458597 2459457 . - . ID=gene2431;Name=SH03_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12170;old_locus_tag=SH03_12175 NZ_CP010441.1 Protein Homology CDS 2458597 2459457 . - 0 ID=cds2367;Parent=gene2431;Dbxref=Genbank:WP_000789751.1;Name=WP_000789751.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal;gbkey=CDS;product=pyridoxamine kinase;protein_id=WP_000789751.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2459519 2460793 . - . ID=gene2432;Name=SH03_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12175;old_locus_tag=SH03_12180 NZ_CP010441.1 Protein Homology CDS 2459519 2460793 . - 0 ID=cds2368;Parent=gene2432;Dbxref=Genbank:WP_001295400.1;Name=WP_001295400.1;gbkey=CDS;product=tyrosine--tRNA ligase;protein_id=WP_001295400.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2460922 2461578 . - . ID=gene2433;Name=SH03_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12180;old_locus_tag=SH03_12185 NZ_CP010441.1 Protein Homology CDS 2460922 2461578 . - 0 ID=cds2369;Parent=gene2433;Dbxref=Genbank:WP_001282319.1;Name=WP_001282319.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate;gbkey=CDS;product=pyridoxine/pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282319.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2461637 2461966 . - . ID=gene2434;Name=SH03_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12185;old_locus_tag=SH03_12190 NZ_CP010441.1 Protein Homology CDS 2461637 2461966 . - 0 ID=cds2370;Parent=gene2434;Dbxref=Genbank:WP_000178044.1;Name=WP_000178044.1;Note=MliC%3B membrane-bound lysozyme inhibitor of c-type lysozyme;gbkey=CDS;product=lysozyme inhibitor;protein_id=WP_000178044.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2462064 2463173 . - . ID=gene2435;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;gene_synonym=ydhH;locus_tag=SH03_RS12190;old_locus_tag=SH03_12195 NZ_CP010441.1 Protein Homology CDS 2462064 2463173 . - 0 ID=cds2371;Parent=gene2435;Dbxref=Genbank:WP_000835039.1;Name=WP_000835039.1;Note=catalyzes hydrolysis of 1%2C6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate%3B involved in murein recycling;gbkey=CDS;gene=anmK;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_000835039.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2463447 2463914 . + . ID=gene2436;Name=SH03_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12195;old_locus_tag=SH03_12200 NZ_CP010441.1 Protein Homology CDS 2463447 2463914 . + 0 ID=cds2372;Parent=gene2436;Dbxref=Genbank:WP_000597196.1;Name=WP_000597196.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000597196.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2463961 2464395 . - . ID=gene2437;Name=SH03_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12200;old_locus_tag=SH03_12205 NZ_CP010441.1 Protein Homology CDS 2463961 2464395 . - 0 ID=cds2373;Parent=gene2437;Dbxref=Genbank:WP_001296943.1;Name=WP_001296943.1;Note=Transcription regulator that can both activate or repress expression;gbkey=CDS;product=SlyA family transcriptional regulator;protein_id=WP_001296943.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2464596 2464832 . + . ID=gene2438;Name=SH03_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12205;old_locus_tag=SH03_12210 NZ_CP010441.1 Protein Homology CDS 2464596 2464832 . + 0 ID=cds2374;Parent=gene2438;Dbxref=Genbank:WP_000670998.1;Name=WP_000670998.1;gbkey=CDS;product=membrane protein;protein_id=WP_000670998.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2464835 2465692 . + . ID=gene2439;Name=SH03_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12210;old_locus_tag=SH03_12215 NZ_CP010441.1 Protein Homology CDS 2464835 2465692 . + 0 ID=cds2375;Parent=gene2439;Dbxref=Genbank:WP_001300356.1;Name=WP_001300356.1;gbkey=CDS;product=membrane fusion protein (MFP) of YdhJK efflux pump;protein_id=WP_001300356.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2465692 2467704 . + . ID=gene2440;Name=SH03_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12215;old_locus_tag=SH03_12220 NZ_CP010441.1 Protein Homology CDS 2465692 2467704 . + 0 ID=cds2376;Parent=gene2440;Dbxref=Genbank:WP_000994333.1;Name=WP_000994333.1;gbkey=CDS;product=efflux protein (PET) component of YdhJK efflux pump;protein_id=WP_000994333.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2467705 2468226 . - . ID=gene2441;Name=SH03_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12220;old_locus_tag=SH03_12225 NZ_CP010441.1 Protein Homology CDS 2467705 2468226 . - 0 ID=cds2377;Parent=gene2441;Dbxref=Genbank:WP_001296937.1;Name=WP_001296937.1;Note=SodC%3B copper and zinc binding%3B converts superoxide radicals to hydrogen peroxide and water;gbkey=CDS;product=superoxide dismutase [Cu-Zn];protein_id=WP_001296937.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2468307 2469203 . - . ID=gene2442;Name=SH03_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12225;old_locus_tag=SH03_12230 NZ_CP010441.1 Protein Homology CDS 2468307 2469203 . - 0 ID=cds2378;Parent=gene2442;Dbxref=Genbank:WP_000250656.1;Name=WP_000250656.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_000250656.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2469252 2469491 . - . ID=gene2443;Name=SH03_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12230;old_locus_tag=SH03_12235 NZ_CP010441.1 Protein Homology CDS 2469252 2469491 . - 0 ID=cds2379;Parent=gene2443;Dbxref=Genbank:WP_000840481.1;Name=WP_000840481.1;gbkey=CDS;product=DUF1289 domain-containing protein;protein_id=WP_000840481.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2469594 2470193 . + . ID=gene2444;Name=SH03_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12235;old_locus_tag=SH03_12240 NZ_CP010441.1 Protein Homology CDS 2469594 2470193 . + 0 ID=cds2380;Parent=gene2444;Dbxref=Genbank:WP_001032936.1;Name=WP_001032936.1;Note=represses nemA which is involved in degradation of N-ethylmaleimide;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001032936.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2470230 2471327 . + . ID=gene2445;Name=SH03_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12240;old_locus_tag=SH03_12245 NZ_CP010441.1 Protein Homology CDS 2470230 2471327 . + 0 ID=cds2381;Parent=gene2445;Dbxref=Genbank:WP_000093589.1;Name=WP_000093589.1;Note=FMN-linked%3B catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide;gbkey=CDS;product=N-ethylmaleimide reductase;protein_id=WP_000093589.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2471408 2471815 . + . ID=gene2446;Name=SH03_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12245;old_locus_tag=SH03_12250 NZ_CP010441.1 Protein Homology CDS 2471408 2471815 . + 0 ID=cds2382;Parent=gene2446;Dbxref=Genbank:WP_001237796.1;Name=WP_001237796.1;Note=Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione;gbkey=CDS;product=lactoylglutathione lyase;protein_id=WP_001237796.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2471918 2472565 . + . ID=gene2447;Name=SH03_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12250;old_locus_tag=SH03_12255 NZ_CP010441.1 Protein Homology CDS 2471918 2472565 . + 0 ID=cds2383;Parent=gene2447;Dbxref=Genbank:WP_001282283.1;Name=WP_001282283.1;Note=Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A);gbkey=CDS;product=ribonuclease T;protein_id=WP_001282283.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2472658 2477274 . + . ID=gene2448;Name=SH03_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12255;old_locus_tag=SH03_12260 NZ_CP010441.1 Protein Homology CDS 2472658 2477274 . + 0 ID=cds2384;Parent=gene2448;Dbxref=Genbank:WP_001310858.1;Name=WP_001310858.1;Note=similar to the DNA and RNA helicase superfamily II and eukaryotic DEAD family of helicases%3B longest known protein in E. coli;gbkey=CDS;product=ATP-dependent helicase;protein_id=WP_001310858.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2477325 2477672 . - . ID=gene2449;Name=SH03_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12260;old_locus_tag=SH03_12265 NZ_CP010441.1 Protein Homology CDS 2477325 2477672 . - 0 ID=cds2385;Parent=gene2449;Dbxref=Genbank:WP_000108172.1;Name=WP_000108172.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_000108172.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2478006 2478821 . + . ID=gene2450;Name=SH03_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12265;old_locus_tag=SH03_12270 NZ_CP010441.1 Protein Homology CDS 2478006 2478821 . + 0 ID=cds2386;Parent=gene2450;Dbxref=Genbank:WP_000101193.1;Name=WP_000101193.1;gbkey=CDS;product=murein DD-endopeptidase MepH;protein_id=WP_000101193.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2478949 2479530 . + . ID=gene2451;Name=SH03_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12270;old_locus_tag=SH03_12275 NZ_CP010441.1 Protein Homology CDS 2478949 2479530 . + 0 ID=cds2387;Parent=gene2451;Dbxref=Genbank:WP_000007283.1;Name=WP_000007283.1;Note=SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals;gbkey=CDS;product=superoxide dismutase [Fe];protein_id=WP_000007283.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2479692 2480861 . - . ID=gene2452;Name=SH03_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12275;old_locus_tag=SH03_12280 NZ_CP010441.1 Protein Homology CDS 2479692 2480861 . - 0 ID=cds2388;Parent=gene2452;Dbxref=Genbank:WP_000701040.1;Name=WP_000701040.1;gbkey=CDS;product=transporter;protein_id=WP_000701040.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2481027 2481116 . - . ID=gene2453;Name=SH03_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12280;old_locus_tag=SH03_12285 NZ_CP010441.1 Protein Homology CDS 2481027 2481116 . - 0 ID=cds2389;Parent=gene2453;Dbxref=Genbank:WP_000102278.1;Name=WP_000102278.1;gbkey=CDS;product=stress response membrane;protein_id=WP_000102278.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2481415 2482440 . + . ID=gene2454;Name=SH03_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12285;old_locus_tag=SH03_12290 NZ_CP010441.1 Protein Homology CDS 2481415 2482440 . + 0 ID=cds2390;Parent=gene2454;Dbxref=Genbank:WP_000190982.1;Name=WP_000190982.1;Note=binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis%3B is involved in regulation of purB%2C purC%2C purEK%2C purHD%2C purL%2C purMN and guaBA expression%3B binds hypoxanthine and guanine as inducers;gbkey=CDS;product=PurR family transcriptional regulator;protein_id=WP_000190982.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2482437 2483369 . - . ID=gene2455;Name=SH03_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12290;old_locus_tag=SH03_12295 NZ_CP010441.1 Protein Homology CDS 2482437 2483369 . - 0 ID=cds2391;Parent=gene2455;Dbxref=Genbank:WP_000269501.1;Name=WP_000269501.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_000269501.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2483482 2484693 . + . ID=gene2456;Name=SH03_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12295;old_locus_tag=SH03_12300 NZ_CP010441.1 Protein Homology CDS 2483482 2484693 . + 0 ID=cds2392;Parent=gene2456;Dbxref=Genbank:WP_001182347.1;Name=WP_001182347.1;Note=uncharacterized member of the major facilitator superfamily (MFS);gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_001182347.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2484984 2486132 . + . ID=gene2457;Name=SH03_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12300;old_locus_tag=SH03_12305 NZ_CP010441.1 Protein Homology CDS 2484984 2486132 . + 0 ID=cds2393;Parent=gene2457;Dbxref=Genbank:WP_000098896.1;Name=WP_000098896.1;Note=catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge;gbkey=CDS;product=cyclopropane-fatty-acyl-phospholipid synthase;protein_id=WP_000098896.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2486172 2486813 . - . ID=gene2458;Name=SH03_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12305;old_locus_tag=SH03_12310 NZ_CP010441.1 Protein Homology CDS 2486172 2486813 . - 0 ID=cds2394;Parent=gene2458;Dbxref=Genbank:WP_000493947.1;Name=WP_000493947.1;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine;gbkey=CDS;product=riboflavin synthase;protein_id=WP_000493947.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2487028 2488401 . + . ID=gene2459;Name=SH03_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12310;old_locus_tag=SH03_12315 NZ_CP010441.1 Protein Homology CDS 2487028 2488401 . + 0 ID=cds2395;Parent=gene2459;Dbxref=Genbank:WP_001174940.1;Name=WP_001174940.1;Note=NorM%3B MdtK%3B functions as a Na(+)/drug antiporter%3B inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones;gbkey=CDS;product=multidrug resistance protein MdtK;protein_id=WP_001174940.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2488442 2489698 . - . ID=gene2460;Name=SH03_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12315;old_locus_tag=SH03_12320 NZ_CP010441.1 Protein Homology CDS 2488442 2489698 . - 0 ID=cds2396;Parent=gene2460;Dbxref=Genbank:WP_000534271.1;Name=WP_000534271.1;gbkey=CDS;product=autotransporter adhesin-related protein;protein_id=WP_000534271.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2490006 2490082 . + . ID=gene2461;Name=SH03_RS12320;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS12320;old_locus_tag=SH03_12325 NZ_CP010441.1 tRNAscan-SE tRNA 2490006 2490082 . + . ID=rna64;Parent=gene2461;anticodon=(pos:2490040..2490042);gbkey=tRNA;product=tRNA-Val NZ_CP010441.1 tRNAscan-SE exon 2490006 2490082 . + . ID=id146;Parent=rna64;anticodon=(pos:2490040..2490042);gbkey=tRNA;product=tRNA-Val NZ_CP010441.1 RefSeq gene 2490087 2490163 . + . ID=gene2462;Name=SH03_RS12325;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS12325;old_locus_tag=SH03_12330 NZ_CP010441.1 tRNAscan-SE tRNA 2490087 2490163 . + . ID=rna65;Parent=gene2462;anticodon=(pos:2490121..2490123);gbkey=tRNA;product=tRNA-Val NZ_CP010441.1 tRNAscan-SE exon 2490087 2490163 . + . ID=id147;Parent=rna65;anticodon=(pos:2490121..2490123);gbkey=tRNA;product=tRNA-Val NZ_CP010441.1 RefSeq gene 2490271 2490576 . + . ID=gene2463;Name=SH03_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12330;old_locus_tag=SH03_12335 NZ_CP010441.1 Protein Homology CDS 2490271 2490576 . + 0 ID=cds2397;Parent=gene2463;Dbxref=Genbank:WP_000212657.1;Name=WP_000212657.1;gbkey=CDS;product=monooxygenase;protein_id=WP_000212657.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2490702 2492306 . + . ID=gene2464;Name=SH03_RS12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12335;old_locus_tag=SH03_12340 NZ_CP010441.1 Protein Homology CDS 2490702 2492306 . + 0 ID=cds2398;Parent=gene2464;Dbxref=Genbank:WP_000716950.1;Name=WP_000716950.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_000716950.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2492318 2493130 . - . ID=gene2465;Name=SH03_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12340;old_locus_tag=SH03_12345 NZ_CP010441.1 Protein Homology CDS 2492318 2493130 . - 0 ID=cds2399;Parent=gene2465;Dbxref=Genbank:WP_000587525.1;Name=WP_000587525.1;gbkey=CDS;product=FNR%2C Nar%2C NarP-regulated protein%3B subunit of YdhYVWXUT oxidoreductase complex;protein_id=WP_000587525.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2493134 2493919 . - . ID=gene2466;Name=SH03_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12345;old_locus_tag=SH03_12350 NZ_CP010441.1 Protein Homology CDS 2493134 2493919 . - 0 ID=cds2400;Parent=gene2466;Dbxref=Genbank:WP_001069979.1;Name=WP_001069979.1;gbkey=CDS;product=protein PhsC;protein_id=WP_001069979.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2493916 2494584 . - . ID=gene2467;Name=SH03_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12350;old_locus_tag=SH03_12355 NZ_CP010441.1 Protein Homology CDS 2493916 2494584 . - 0 ID=cds2401;Parent=gene2467;Dbxref=Genbank:WP_001310861.1;Name=WP_001310861.1;gbkey=CDS;product=4Fe-4S ferredoxin;protein_id=WP_001310861.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2494648 2495286 . - . ID=gene2468;Name=SH03_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12355;old_locus_tag=SH03_12360 NZ_CP010441.1 Protein Homology CDS 2494648 2495286 . - 0 ID=cds2402;Parent=gene2468;Dbxref=Genbank:WP_001301419.1;Name=WP_001301419.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001301419.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2495299 2497401 . - . ID=gene2469;Name=SH03_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12360;old_locus_tag=SH03_12365 NZ_CP010441.1 Protein Homology CDS 2495299 2497401 . - 0 ID=cds2403;Parent=gene2469;Dbxref=Genbank:WP_001273527.1;Name=WP_001273527.1;gbkey=CDS;product=oxidoreductase subunit;protein_id=WP_001273527.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2497422 2498048 . - . ID=gene2470;Name=SH03_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12365;old_locus_tag=SH03_12370 NZ_CP010441.1 Protein Homology CDS 2497422 2498048 . - 0 ID=cds2404;Parent=gene2470;Dbxref=Genbank:WP_001070230.1;Name=WP_001070230.1;gbkey=CDS;product=4Fe-4S ferredoxin;protein_id=WP_001070230.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2498503 2498712 . - . ID=gene2471;Name=SH03_RS12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12370;old_locus_tag=SH03_12375 NZ_CP010441.1 Protein Homology CDS 2498503 2498712 . - 0 ID=cds2405;Parent=gene2471;Dbxref=Genbank:WP_000528342.1;Name=WP_000528342.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000528342.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2499269 2500681 . + . ID=gene2472;Name=SH03_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12375;old_locus_tag=SH03_12380 NZ_CP010441.1 Protein Homology CDS 2499269 2500681 . + 0 ID=cds2406;Parent=gene2472;Dbxref=Genbank:WP_001295403.1;Name=WP_001295403.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=pyruvate kinase I;protein_id=WP_001295403.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2500992 2501228 . + . ID=gene2473;Name=SH03_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12380;old_locus_tag=SH03_12385 NZ_CP010441.1 Protein Homology CDS 2500992 2501228 . + 0 ID=cds2407;Parent=gene2473;Dbxref=Genbank:WP_000648420.1;Name=WP_000648420.1;Note=major outer membrane lipoprotein%3B interacts with peptidoglycan to maintain the integrity of the cell envelope;gbkey=CDS;product=murein lipoprotein;protein_id=WP_000648420.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2501292 2502296 . - . ID=gene2474;Name=SH03_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12385;old_locus_tag=SH03_12390 NZ_CP010441.1 Protein Homology CDS 2501292 2502296 . - 0 ID=cds2408;Parent=gene2474;Dbxref=Genbank:WP_000817105.1;Name=WP_000817105.1;Note=catalyzes the formation of a meso-diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link in peptidoglycan synthesis;gbkey=CDS;product=transpeptidase;protein_id=WP_000817105.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2502445 2502861 . - . ID=gene2475;Name=SH03_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12390;old_locus_tag=SH03_12395 NZ_CP010441.1 Protein Homology CDS 2502445 2502861 . - 0 ID=cds2409;Parent=gene2475;Dbxref=Genbank:WP_001196530.1;Name=WP_001196530.1;Note=Acts with SufS to catalyze the formation of L-alanine from L-cysteine;gbkey=CDS;product=cysteine desulfuration protein SufE;protein_id=WP_001196530.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2502874 2504094 . - . ID=gene2476;Name=SH03_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12395;old_locus_tag=SH03_12400 NZ_CP010441.1 Protein Homology CDS 2502874 2504094 . - 0 ID=cds2410;Parent=gene2476;Dbxref=Genbank:WP_000577988.1;Name=WP_000577988.1;gbkey=CDS;product=cysteine desulfurase;protein_id=WP_000577988.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2504091 2505362 . - . ID=gene2477;Name=SH03_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12400;old_locus_tag=SH03_12405 NZ_CP010441.1 Protein Homology CDS 2504091 2505362 . - 0 ID=cds2411;Parent=gene2477;Dbxref=Genbank:WP_000907979.1;Name=WP_000907979.1;Note=with SufBC activates cysteine desulfurase SufS;gbkey=CDS;product=Fe-S cluster assembly protein SufD;protein_id=WP_000907979.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2505337 2506083 . - . ID=gene2478;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=SH03_RS12405;old_locus_tag=SH03_12410 NZ_CP010441.1 Protein Homology CDS 2505337 2506083 . - 0 ID=cds2412;Parent=gene2478;Dbxref=Genbank:WP_000948863.1;Name=WP_000948863.1;Note=part of SUF system involved in inserting iron-sulfur clusters into proteins%3B in Escherichia coli this protein forms a complex with SufBD%3B the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE;gbkey=CDS;gene=sufC;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000948863.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2506093 2507580 . - . ID=gene2479;Name=SH03_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12410;old_locus_tag=SH03_12415 NZ_CP010441.1 Protein Homology CDS 2506093 2507580 . - 0 ID=cds2413;Parent=gene2479;Dbxref=Genbank:WP_000089364.1;Name=WP_000089364.1;Note=with SufCD activates cysteine desulfurase SufS;gbkey=CDS;product=FeS cluster assembly protein SufB;protein_id=WP_000089364.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2507589 2507957 . - . ID=gene2480;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=SH03_RS12415;old_locus_tag=SH03_12420 NZ_CP010441.1 Protein Homology CDS 2507589 2507957 . - 0 ID=cds2414;Parent=gene2480;Dbxref=Genbank:WP_000367160.1;Name=WP_000367160.1;Note=functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]%3B [4Fe-4S]) are assembled%3B forms a homodimer%3B similar to IscA protein;gbkey=CDS;gene=sufA;product=protein SufA;protein_id=WP_000367160.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2508505 2508693 . - . ID=gene2481;Name=SH03_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12420;old_locus_tag=SH03_12425 NZ_CP010441.1 Protein Homology CDS 2508505 2508693 . - 0 ID=cds2415;Parent=gene2481;Dbxref=Genbank:WP_001296104.1;Name=WP_001296104.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001296104.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2508793 2509203 . - . ID=gene2482;Name=SH03_RS12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12425;old_locus_tag=SH03_12430 NZ_CP010441.1 Protein Homology CDS 2508793 2509203 . - 0 ID=cds2416;Parent=gene2482;Dbxref=Genbank:WP_000637982.1;Name=WP_000637982.1;Note=required for efficient enterobactin production;gbkey=CDS;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637982.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2509200 2512256 . - . ID=gene2483;Name=SH03_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12430;old_locus_tag=SH03_12435 NZ_CP010441.1 Protein Homology CDS 2509200 2512256 . - 0 ID=cds2417;Parent=gene2483;Dbxref=Genbank:WP_000613008.1;Name=WP_000613008.1;gbkey=CDS;product=FAD-linked oxidoreductase;protein_id=WP_000613008.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2512645 2513757 . + . ID=gene2484;Name=SH03_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12435;old_locus_tag=SH03_12440 NZ_CP010441.1 Protein Homology CDS 2512645 2513757 . + 0 ID=cds2418;Parent=gene2484;Dbxref=Genbank:WP_000248636.1;Name=WP_000248636.1;Note=YdiK%3B inner membrane protein%3B ydiK promoter presents a PurR sequence%2C suggesting that its expression is purine-regulated%3B unknown function;gbkey=CDS;product=hypothetical protein;protein_id=WP_000248636.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2514186 2514542 . + . ID=gene2485;Name=SH03_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12440;old_locus_tag=SH03_12445 NZ_CP010441.1 Protein Homology CDS 2514186 2514542 . + 0 ID=cds2419;Parent=gene2485;Dbxref=Genbank:WP_001310864.1;Name=WP_001310864.1;gbkey=CDS;product=HTH domain DNA-binding protein;protein_id=WP_001310864.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2514642 2515856 . + . ID=gene2486;Name=SH03_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12445;old_locus_tag=SH03_12450 NZ_CP010441.1 Protein Homology CDS 2514642 2515856 . + 0 ID=cds2420;Parent=gene2486;Dbxref=Genbank:WP_000795537.1;Name=WP_000795537.1;gbkey=CDS;product=transporter;protein_id=WP_000795537.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2516083 2517348 . + . ID=gene2487;Name=SH03_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12450;old_locus_tag=SH03_12455 NZ_CP010441.1 Protein Homology CDS 2516083 2517348 . + 0 ID=cds2421;Parent=gene2487;Dbxref=Genbank:WP_000081197.1;Name=WP_000081197.1;gbkey=CDS;product=transporter;protein_id=WP_000081197.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2517360 2518226 . + . ID=gene2488;Name=SH03_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12455;old_locus_tag=SH03_12460 NZ_CP010441.1 Protein Homology CDS 2517360 2518226 . + 0 ID=cds2422;Parent=gene2488;Dbxref=Genbank:WP_000383469.1;Name=WP_000383469.1;Note=YdiB%3B quinate/shikimate dehydrogenase from Escherichia coli uses both NAD and NAD(P) to convert quinate and shikimate to 3-dehydroquinate and 3-dehydroshikimate;gbkey=CDS;product=quinate/shikimate dehydrogenase;protein_id=WP_000383469.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2518257 2519015 . + . ID=gene2489;Name=SH03_RS12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12460;old_locus_tag=SH03_12465 NZ_CP010441.1 Protein Homology CDS 2518257 2519015 . + 0 ID=cds2423;Parent=gene2489;Dbxref=Genbank:WP_000860201.1;Name=WP_000860201.1;gbkey=CDS;product=3-dehydroquinate dehydratase;protein_id=WP_000860201.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2519158 2520753 . + . ID=gene2490;Name=SH03_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12465;old_locus_tag=SH03_12470 NZ_CP010441.1 Protein Homology CDS 2519158 2520753 . + 0 ID=cds2424;Parent=gene2490;Dbxref=Genbank:WP_000805700.1;Name=WP_000805700.1;gbkey=CDS;product=acetate CoA-transferase YdiF;protein_id=WP_000805700.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2520767 2521918 . + . ID=gene2491;Name=SH03_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12470;old_locus_tag=SH03_12475 NZ_CP010441.1 Protein Homology CDS 2520767 2521918 . + 0 ID=cds2425;Parent=gene2491;Dbxref=Genbank:WP_000347850.1;Name=WP_000347850.1;Note=may play a role in electron transport between the anaerobic fatty acid oxidation pathway and the respiratory chain;gbkey=CDS;product=acyl-CoA dehydrogenase;protein_id=WP_000347850.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2521961 2522872 . - . ID=gene2492;Name=SH03_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12475;old_locus_tag=SH03_12480 NZ_CP010441.1 Protein Homology CDS 2521961 2522872 . - 0 ID=cds2426;Parent=gene2492;Dbxref=Genbank:WP_000284799.1;Name=WP_000284799.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000284799.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2522975 2523151 . - . ID=gene2493;Name=SH03_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12480;old_locus_tag=SH03_12485 NZ_CP010441.1 Protein Homology CDS 2522975 2523151 . - 0 ID=cds2427;Parent=gene2493;Dbxref=Genbank:WP_000398611.1;Name=WP_000398611.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000398611.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2523188 2523952 . + . ID=gene2494;Name=SH03_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12485;old_locus_tag=SH03_12490 NZ_CP010441.1 Protein Homology CDS 2523188 2523952 . + 0 ID=cds2428;Parent=gene2494;Dbxref=Genbank:WP_000692135.1;Name=WP_000692135.1;gbkey=CDS;product=electron transfer flavoprotein subunit;protein_id=WP_000692135.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2523972 2524910 . + . ID=gene2495;Name=fixB;gbkey=Gene;gene=fixB;gene_biotype=protein_coding;locus_tag=SH03_RS12490;old_locus_tag=SH03_12495 NZ_CP010441.1 Protein Homology CDS 2523972 2524910 . + 0 ID=cds2429;Parent=gene2495;Dbxref=Genbank:WP_000080722.1;Name=WP_000080722.1;Note=involved in electron transfer during carnitine metabolism;gbkey=CDS;gene=fixB;product=electron transfer flavoprotein%2C FAD-binding subunit;protein_id=WP_000080722.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2524966 2526255 . + . ID=gene2496;Name=SH03_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12495;old_locus_tag=SH03_12500 NZ_CP010441.1 Protein Homology CDS 2524966 2526255 . + 0 ID=cds2430;Parent=gene2496;Dbxref=Genbank:WP_001278525.1;Name=WP_001278525.1;Note=FAD/NAD(P)-binding domain%3B possibly part of an electron transfer system required for anaerobic carnitine reduction;gbkey=CDS;product=electron transfer flavoprotein-quinone oxidoreductase;protein_id=WP_001278525.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2526252 2526545 . + . ID=gene2497;Name=SH03_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12500;old_locus_tag=SH03_12505 NZ_CP010441.1 Protein Homology CDS 2526252 2526545 . + 0 ID=cds2431;Parent=gene2497;Dbxref=Genbank:WP_000081081.1;Name=WP_000081081.1;gbkey=CDS;product=ferredoxin-like protein YdiT;protein_id=WP_000081081.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2526602 2528248 . + . ID=gene2498;Name=SH03_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12505;old_locus_tag=SH03_12510 NZ_CP010441.1 Protein Homology CDS 2526602 2528248 . + 0 ID=cds2432;Parent=gene2498;Dbxref=Genbank:WP_001336282.1;Name=WP_001336282.1;Note=acts in anaerobic beta-oxidation of fatty acids%3B possible ligase/synthase involved in anaerobic growth on fatty acids;gbkey=CDS;product=short-chain-fatty-acid--CoA ligase;protein_id=WP_001336282.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2528305 2530683 . - . ID=gene2499;Name=SH03_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12510;old_locus_tag=SH03_12515 NZ_CP010441.1 Protein Homology CDS 2528305 2530683 . - 0 ID=cds2433;Parent=gene2499;Dbxref=Genbank:WP_000069375.1;Name=WP_000069375.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=phosphoenolpyruvate synthase;protein_id=WP_000069375.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2530737 2530904 . - . ID=gene2500;Name=SH03_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12515;old_locus_tag=SH03_12520 NZ_CP010441.1 Protein Homology CDS 2530737 2530904 . - 0 ID=cds2434;Parent=gene2500;Dbxref=Genbank:WP_001298222.1;Name=WP_001298222.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001298222.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2531016 2531849 . + . ID=gene2501;Name=SH03_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12520;old_locus_tag=SH03_12525 NZ_CP010441.1 Protein Homology CDS 2531016 2531849 . + 0 ID=cds2435;Parent=gene2501;Dbxref=Genbank:WP_000368046.1;Name=WP_000368046.1;gbkey=CDS;product=phosphoenolpyruvate synthase regulatory protein;protein_id=WP_000368046.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2532006 2533052 . + . ID=gene2502;Name=SH03_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12525;old_locus_tag=SH03_12530 NZ_CP010441.1 Protein Homology CDS 2532006 2533052 . + 0 ID=cds2436;Parent=gene2502;Dbxref=Genbank:WP_001082229.1;Name=WP_001082229.1;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase Trp-sensitive;protein_id=WP_001082229.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2533184 2533375 . + . ID=gene2503;Name=SH03_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12530;old_locus_tag=SH03_12535 NZ_CP010441.1 Protein Homology CDS 2533184 2533375 . + 0 ID=cds2437;Parent=gene2503;Dbxref=Genbank:WP_001270809.1;Name=WP_001270809.1;gbkey=CDS;product=hemin uptake protein HemP homolog;protein_id=WP_001270809.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2533379 2534815 . - . ID=gene2504;Name=SH03_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12535;old_locus_tag=SH03_12540 NZ_CP010441.1 Protein Homology CDS 2533379 2534815 . - 0 ID=cds2438;Parent=gene2504;Dbxref=Genbank:WP_000175703.1;Name=WP_000175703.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000175703.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2534878 2535591 . - . ID=gene2505;Name=SH03_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12540;old_locus_tag=SH03_12545 NZ_CP010441.1 Protein Homology CDS 2534878 2535591 . - 0 ID=cds2439;Parent=gene2505;Dbxref=Genbank:WP_001300634.1;Name=WP_001300634.1;gbkey=CDS;product=anti-FlhD4C2 factor%2C inactive EAL family phosphodiesterase;protein_id=WP_001300634.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2535838 2536302 . - . ID=gene2506;Name=SH03_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12545;old_locus_tag=SH03_12550 NZ_CP010441.1 Protein Homology CDS 2535838 2536302 . - 0 ID=cds2440;Parent=gene2506;Dbxref=Genbank:WP_001209795.1;Name=WP_001209795.1;gbkey=CDS;product=endopeptidase;protein_id=WP_001209795.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2536380 2537128 . - . ID=gene2507;Name=SH03_RS12550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS12550;pseudo=true NZ_CP010441.1 Protein Homology CDS 2536380 2537128 . - 0 ID=cds2441;Parent=gene2507;Note=ATP-binding protein that acts with the transmembrane protein BtuC and the solute binding protein BtuF to transport vitamin B12 into the cell;exception=annotated by transcript or proteomic data;gbkey=CDS;product=vitamin B12-transporter ATPase;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 2537128 2537679 . - . ID=gene2508;Name=btuE;gbkey=Gene;gene=btuE;gene_biotype=protein_coding;locus_tag=SH03_RS12555;old_locus_tag=SH03_12560 NZ_CP010441.1 Protein Homology CDS 2537128 2537679 . - 0 ID=cds2442;Parent=gene2508;Dbxref=Genbank:WP_001154168.1;Name=WP_001154168.1;Note=similar to glutathione peroxidase%3B member of the btuCED operon which is required for vitamin B12 transport across the inner membrane;gbkey=CDS;gene=btuE;product=vitamin B12 transport periplasmic protein BtuE;protein_id=WP_001154168.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2537742 2538722 . - . ID=gene2509;Name=SH03_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12560;old_locus_tag=SH03_12565 NZ_CP010441.1 Protein Homology CDS 2537742 2538722 . - 0 ID=cds2443;Parent=gene2509;Dbxref=Genbank:WP_000956528.1;Name=WP_000956528.1;Note=with BtuD and BtuF transports vitamin B12 into the cell;gbkey=CDS;product=vitamin B12 import system permease BtuC;protein_id=WP_000956528.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2538823 2539122 . - . ID=gene2510;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=SH03_RS12565;old_locus_tag=SH03_12570 NZ_CP010441.1 Protein Homology CDS 2538823 2539122 . - 0 ID=cds2444;Parent=gene2510;Dbxref=Genbank:WP_001229265.1;Name=WP_001229265.1;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;gbkey=CDS;gene=ihfA;product=integration host factor subunit alpha;protein_id=WP_001229265.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2539127 2541514 . - . ID=gene2511;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=SH03_RS12570;old_locus_tag=SH03_12575 NZ_CP010441.1 Protein Homology CDS 2539127 2541514 . - 0 ID=cds2445;Parent=gene2511;Dbxref=Genbank:WP_000672380.1;Name=WP_000672380.1;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily;gbkey=CDS;gene=pheT;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_000672380.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2541529 2542512 . - . ID=gene2512;Name=SH03_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12575;old_locus_tag=SH03_12580 NZ_CP010441.1 Protein Homology CDS 2541529 2542512 . - 0 ID=cds2446;Parent=gene2512;Dbxref=Genbank:WP_000018596.1;Name=WP_000018596.1;gbkey=CDS;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000018596.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2542626 2542721 . - . ID=gene2513;Name=SH03_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12580;old_locus_tag=SH03_12585 NZ_CP010441.1 Protein Homology CDS 2542626 2542721 . - 0 ID=cds2447;Parent=gene2513;Dbxref=Genbank:WP_001264819.1;Name=WP_001264819.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001264819.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2542963 2543319 . - . ID=gene2514;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=SH03_RS12585;old_locus_tag=SH03_12590 NZ_CP010441.1 Protein Homology CDS 2542963 2543319 . - 0 ID=cds2448;Parent=gene2514;Dbxref=Genbank:WP_000124850.1;Name=WP_000124850.1;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;gbkey=CDS;gene=rplT;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2543372 2543569 . - . ID=gene2515;Name=SH03_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12590;old_locus_tag=SH03_12595 NZ_CP010441.1 Protein Homology CDS 2543372 2543569 . - 0 ID=cds2449;Parent=gene2515;Dbxref=Genbank:WP_001124225.1;Name=WP_001124225.1;gbkey=CDS;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2543666 2544208 . - . ID=gene2516;Name=SH03_RS12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12595;old_locus_tag=SH03_12600 NZ_CP010441.1 Protein Homology CDS 2543666 2544208 . - 0 ID=cds2450;Parent=gene2516;Dbxref=Genbank:WP_001700733.1;Name=WP_001700733.1;gbkey=CDS;product=translation initiation factor IF-3;protein_id=WP_001700733.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2544212 2546140 . - . ID=gene2517;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=SH03_RS12600;old_locus_tag=SH03_12605 NZ_CP010441.1 Protein Homology CDS 2544212 2546140 . - 0 ID=cds2451;Parent=gene2517;Dbxref=Genbank:WP_001144202.1;Name=WP_001144202.1;Note=catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr);gbkey=CDS;gene=thrS;product=threonine--tRNA ligase;protein_id=WP_001144202.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2546664 2548563 . + . ID=gene2518;Name=SH03_RS12605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS12605;pseudo=true NZ_CP010441.1 Protein Homology CDS 2546664 2548563 . + 0 ID=cds2452;Parent=gene2518;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ankyrin;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 2548735 2548842 . + . ID=gene2519;Name=SH03_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12610;old_locus_tag=SH03_12615 NZ_CP010441.1 Protein Homology CDS 2548735 2548842 . + 0 ID=cds2453;Parent=gene2519;Dbxref=Genbank:WP_001142445.1;Name=WP_001142445.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001142445.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2548895 2549653 . - . ID=gene2520;Name=SH03_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12615;old_locus_tag=SH03_12620 NZ_CP010441.1 Protein Homology CDS 2548895 2549653 . - 0 ID=cds2454;Parent=gene2520;Dbxref=Genbank:WP_038432589.1;Name=WP_038432589.1;gbkey=CDS;product=membrane protein;protein_id=WP_038432589.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2549940 2550869 . + . ID=gene2521;Name=SH03_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12620;old_locus_tag=SH03_12625 NZ_CP010441.1 Protein Homology CDS 2549940 2550869 . + 0 ID=cds2455;Parent=gene2521;Dbxref=Genbank:WP_000251727.1;Name=WP_000251727.1;gbkey=CDS;product=ATP-dependent 6-phosphofructokinase;protein_id=WP_000251727.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2550970 2551260 . + . ID=gene2522;Name=SH03_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12625;old_locus_tag=SH03_12630 NZ_CP010441.1 Protein Homology CDS 2550970 2551260 . + 0 ID=cds2456;Parent=gene2522;Dbxref=Genbank:WP_000146159.1;Name=WP_000146159.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000146159.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2551366 2552226 . + . ID=gene2523;Name=SH03_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12630;old_locus_tag=SH03_12635 NZ_CP010441.1 Protein Homology CDS 2551366 2552226 . + 0 ID=cds2457;Parent=gene2523;Dbxref=Genbank:WP_000267650.1;Name=WP_000267650.1;gbkey=CDS;product=fructosamine kinase;protein_id=WP_000267650.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2552267 2552803 . - . ID=gene2524;Name=SH03_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12635;old_locus_tag=SH03_12640 NZ_CP010441.1 Protein Homology CDS 2552267 2552803 . - 0 ID=cds2458;Parent=gene2524;Dbxref=Genbank:WP_000222163.1;Name=WP_000222163.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000222163.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2552950 2553618 . + . ID=gene2525;Name=SH03_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12640;old_locus_tag=SH03_12645 NZ_CP010441.1 Protein Homology CDS 2552950 2553618 . + 0 ID=cds2459;Parent=gene2525;Dbxref=Genbank:WP_000106833.1;Name=WP_000106833.1;Note=YniC%3B catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate%2C mannose 6-phosphate and p-nitrophenyl phosphate;gbkey=CDS;product=2-deoxyglucose-6-phosphate phosphatase;protein_id=WP_000106833.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2553781 2554371 . + . ID=gene2526;Name=SH03_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12645;old_locus_tag=SH03_12650 NZ_CP010441.1 Protein Homology CDS 2553781 2554371 . + 0 ID=cds2460;Parent=gene2526;Dbxref=Genbank:WP_001297653.1;Name=WP_001297653.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001297653.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2554504 2555895 . + . ID=gene2527;Name=SH03_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12650;old_locus_tag=SH03_12655 NZ_CP010441.1 Protein Homology CDS 2554504 2555895 . + 0 ID=cds2461;Parent=gene2527;Dbxref=Genbank:WP_001010696.1;Name=WP_001010696.1;gbkey=CDS;product=transporter;protein_id=WP_001010696.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2555899 2556702 . - . ID=gene2528;Name=SH03_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12655;old_locus_tag=SH03_12660 NZ_CP010441.1 Protein Homology CDS 2555899 2556702 . - 0 ID=cds2462;Parent=gene2528;Dbxref=Genbank:WP_001310874.1;Name=WP_001310874.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001310874.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2556991 2557233 . - . ID=gene2529;Name=SH03_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12660;old_locus_tag=SH03_12665 NZ_CP010441.1 Protein Homology CDS 2556991 2557233 . - 0 ID=cds2463;Parent=gene2529;Dbxref=Genbank:WP_001295480.1;Name=WP_001295480.1;gbkey=CDS;product=cell division activator CedA;protein_id=WP_001295480.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2557437 2559698 . + . ID=gene2530;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=SH03_RS12665;old_locus_tag=SH03_12670 NZ_CP010441.1 Protein Homology CDS 2557437 2559698 . + 0 ID=cds2464;Parent=gene2530;Dbxref=Genbank:WP_000077872.1;Name=WP_000077872.1;Note=Catalase HPII%3B monofunctional catalase that decomposes hydrogen peroxide into water and oxygen%3B serves to protect cells from the toxic effects of hydrogen peroxide;gbkey=CDS;gene=katE;product=catalase HPII;protein_id=WP_000077872.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2559956 2560705 . - . ID=gene2531;Name=SH03_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12670;old_locus_tag=SH03_12675 NZ_CP010441.1 Protein Homology CDS 2559956 2560705 . - 0 ID=cds2465;Parent=gene2531;Dbxref=Genbank:WP_000440471.1;Name=WP_000440471.1;gbkey=CDS;product=chitooligosaccharide deacetylase ChbG;protein_id=WP_000440471.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2560718 2562070 . - . ID=gene2532;Name=SH03_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12675;old_locus_tag=SH03_12680 NZ_CP010441.1 Protein Homology CDS 2560718 2562070 . - 0 ID=cds2466;Parent=gene2532;Dbxref=Genbank:WP_000078765.1;Name=WP_000078765.1;Note=catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate;gbkey=CDS;product=6-phospho-beta-glucosidase;protein_id=WP_000078765.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2562175 2563014 . - . ID=gene2533;Name=SH03_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12680;old_locus_tag=SH03_12685 NZ_CP010441.1 Protein Homology CDS 2562175 2563014 . - 0 ID=cds2467;Parent=gene2533;Dbxref=Genbank:WP_001301288.1;Name=WP_001301288.1;Note=represses the celABCDF-ydjC operon involved in carbon uptake;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001301288.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2563025 2563375 . - . ID=gene2534;Name=SH03_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12685;old_locus_tag=SH03_12690 NZ_CP010441.1 Protein Homology CDS 2563025 2563375 . - 0 ID=cds2468;Parent=gene2534;Dbxref=Genbank:WP_000968919.1;Name=WP_000968919.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=N%2CN'-diacetylchitobiose-specific phosphotransferase enzyme IIA component;protein_id=WP_000968919.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2563426 2564784 . - . ID=gene2535;Name=SH03_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12690;old_locus_tag=SH03_12695 NZ_CP010441.1 Protein Homology CDS 2563426 2564784 . - 0 ID=cds2469;Parent=gene2535;Dbxref=Genbank:WP_000073041.1;Name=WP_000073041.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=N%2CN'-diacetylchitobiose permease IIC component;protein_id=WP_000073041.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2564869 2565189 . - . ID=gene2536;Name=SH03_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12695;old_locus_tag=SH03_12700 NZ_CP010441.1 Protein Homology CDS 2564869 2565189 . - 0 ID=cds2470;Parent=gene2536;Dbxref=Genbank:WP_000412169.1;Name=WP_000412169.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=N%2CN'-diacetylchitobiose-specific phosphotransferase enzyme IIB component;protein_id=WP_000412169.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2565488 2565826 . - . ID=gene2537;Name=SH03_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12700;old_locus_tag=SH03_12705 NZ_CP010441.1 Protein Homology CDS 2565488 2565826 . - 0 ID=cds2471;Parent=gene2537;Dbxref=Genbank:WP_001039044.1;Name=WP_001039044.1;Note=osmotically-inducible lipoprotein E%3B activator of ntr-like gene protein;gbkey=CDS;product=osmotically-inducible lipoprotein E;protein_id=WP_001039044.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2566028 2566855 . + . ID=gene2538;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=SH03_RS12705;old_locus_tag=SH03_12710 NZ_CP010441.1 Protein Homology CDS 2566028 2566855 . + 0 ID=cds2472;Parent=gene2538;Dbxref=Genbank:WP_000175026.1;Name=WP_000175026.1;Note=catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers;gbkey=CDS;gene=nadE;product=nH(3)-dependent NAD+ synthetase;protein_id=WP_000175026.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2566824 2567015 . - . ID=gene2539;Name=SH03_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12710 NZ_CP010441.1 Protein Homology CDS 2566824 2567015 . - 0 ID=cds2473;Parent=gene2539;Dbxref=Genbank:WP_042004706.1;Name=WP_042004706.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042004706.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2567085 2567972 . + . ID=gene2540;Name=SH03_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12715;old_locus_tag=SH03_12720 NZ_CP010441.1 Protein Homology CDS 2567085 2567972 . + 0 ID=cds2474;Parent=gene2540;Dbxref=Genbank:WP_000252397.1;Name=WP_000252397.1;Note=3' incision activity%3B acts with UvrC;gbkey=CDS;product=excinuclease cho;protein_id=WP_000252397.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2567932 2568507 . - . ID=gene2541;Name=SH03_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12720;old_locus_tag=SH03_12725 NZ_CP010441.1 Protein Homology CDS 2567932 2568507 . - 0 ID=cds2475;Parent=gene2541;Dbxref=Genbank:WP_001300480.1;Name=WP_001300480.1;gbkey=CDS;product=protein Ves;protein_id=WP_001300480.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2568710 2569195 . - . ID=gene2542;Name=SH03_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12725;old_locus_tag=SH03_12730 NZ_CP010441.1 Protein Homology CDS 2568710 2569195 . - 0 ID=cds2476;Parent=gene2542;Dbxref=Genbank:WP_001228984.1;Name=WP_001228984.1;Note=periplasmic protein induced by stress response via Cpx and BaeSR system%3B similar to CpxP;gbkey=CDS;product=spheroplast protein Y;protein_id=WP_001228984.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2569525 2570493 . - . ID=gene2543;Name=SH03_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12730;old_locus_tag=SH03_12735 NZ_CP010441.1 Protein Homology CDS 2569525 2570493 . - 0 ID=cds2477;Parent=gene2543;Dbxref=Genbank:WP_000368506.1;Name=WP_000368506.1;Note=catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism;gbkey=CDS;product=succinylglutamate desuccinylase;protein_id=WP_000368506.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2570486 2571829 . - . ID=gene2544;Name=SH03_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12735;old_locus_tag=SH03_12740 NZ_CP010441.1 Protein Homology CDS 2570486 2571829 . - 0 ID=cds2478;Parent=gene2544;Dbxref=Genbank:WP_000994973.1;Name=WP_000994973.1;Note=catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine%2C ammonia and carbon dioxide in arginine degradation;gbkey=CDS;product=N-succinylarginine dihydrolase;protein_id=WP_000994973.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2571826 2573304 . - . ID=gene2545;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=SH03_RS12740;old_locus_tag=SH03_12745 NZ_CP010441.1 Protein Homology CDS 2571826 2573304 . - 0 ID=cds2479;Parent=gene2545;Dbxref=Genbank:WP_000177206.1;Name=WP_000177206.1;Note=a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity%3B converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH;gbkey=CDS;gene=astD;product=N-succinylglutamate 5-semialdehyde dehydrogenase;protein_id=WP_000177206.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2573301 2574335 . - . ID=gene2546;Name=SH03_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12745;old_locus_tag=SH03_12750 NZ_CP010441.1 Protein Homology CDS 2573301 2574335 . - 0 ID=cds2480;Parent=gene2546;Dbxref=Genbank:WP_000989419.1;Name=WP_000989419.1;gbkey=CDS;product=arginine N-succinyltransferase;protein_id=WP_000989419.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2574332 2575552 . - . ID=gene2547;Name=SH03_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12750;old_locus_tag=SH03_12755 NZ_CP010441.1 Protein Homology CDS 2574332 2575552 . - 0 ID=cds2481;Parent=gene2547;Dbxref=Genbank:WP_000081983.1;Name=WP_000081983.1;Note=catalyzes the transamination of 2-N-succinylornithine and alpha-ketoglutarate into 2-N-succinylglutamate semialdehyde and glutamate%3B also functions as the catabolic acetylornithine aminotransferase catalyzing the formation of 2-N-acetylglutamate semialdehyde and glutamate from 2-N-acetylornithine and alpha-ketoglutarate;gbkey=CDS;product=succinylornithine aminotransferase;protein_id=WP_000081983.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2575998 2576804 . + . ID=gene2548;Name=SH03_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12755;old_locus_tag=SH03_12760 NZ_CP010441.1 Protein Homology CDS 2575998 2576804 . + 0 ID=cds2482;Parent=gene2548;Dbxref=Genbank:WP_000673918.1;Name=WP_000673918.1;gbkey=CDS;product=exodeoxyribonuclease III;protein_id=WP_000673918.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2576971 2577681 . + . ID=gene2549;Name=SH03_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12760;old_locus_tag=SH03_12765 NZ_CP010441.1 Protein Homology CDS 2576971 2577681 . + 0 ID=cds2483;Parent=gene2549;Dbxref=Genbank:WP_001300395.1;Name=WP_001300395.1;gbkey=CDS;product=TVP38/TMEM64 family membrane protein YdjX;protein_id=WP_001300395.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2577686 2578363 . + . ID=gene2550;Name=SH03_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12765;old_locus_tag=SH03_12770 NZ_CP010441.1 Protein Homology CDS 2577686 2578363 . + 0 ID=cds2484;Parent=gene2550;Dbxref=Genbank:WP_000939212.1;Name=WP_000939212.1;gbkey=CDS;product=ferrodoxin-like lipoprotein;protein_id=WP_000939212.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2578378 2579085 . + . ID=gene2551;Name=SH03_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12770;old_locus_tag=SH03_12775 NZ_CP010441.1 Protein Homology CDS 2578378 2579085 . + 0 ID=cds2485;Parent=gene2551;Dbxref=Genbank:WP_000980098.1;Name=WP_000980098.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000980098.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2579085 2579633 . + . ID=gene2552;Name=SH03_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12775;old_locus_tag=SH03_12780 NZ_CP010441.1 Protein Homology CDS 2579085 2579633 . + 0 ID=cds2486;Parent=gene2552;Dbxref=Genbank:WP_000524097.1;Name=WP_000524097.1;gbkey=CDS;product=carboxymuconolactone decarboxylase;protein_id=WP_000524097.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2579643 2580809 . + . ID=gene2553;Name=SH03_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12780;old_locus_tag=SH03_12785 NZ_CP010441.1 Protein Homology CDS 2579643 2580809 . + 0 ID=cds2487;Parent=gene2553;Dbxref=Genbank:WP_001215339.1;Name=WP_001215339.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001215339.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2580782 2582317 . + . ID=gene2554;Name=SH03_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12785;old_locus_tag=SH03_12790 NZ_CP010441.1 Protein Homology CDS 2580782 2582317 . + 0 ID=cds2488;Parent=gene2554;Dbxref=Genbank:WP_000224958.1;Name=WP_000224958.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_000224958.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2582317 2582970 . + . ID=gene2555;Name=SH03_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12790;old_locus_tag=SH03_12795 NZ_CP010441.1 Protein Homology CDS 2582317 2582970 . + 0 ID=cds2489;Parent=gene2555;Dbxref=Genbank:WP_001300558.1;Name=WP_001300558.1;gbkey=CDS;product=ABC transporter ATPase;protein_id=WP_001300558.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2583037 2584344 . + . ID=gene2556;Name=SH03_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12795;old_locus_tag=SH03_12800 NZ_CP010441.1 Protein Homology CDS 2583037 2584344 . + 0 ID=cds2490;Parent=gene2556;Dbxref=Genbank:WP_001350515.1;Name=WP_001350515.1;gbkey=CDS;product=thiosulfate sulfurtransferase YnjE;protein_id=WP_001350515.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2584353 2584973 . - . ID=gene2557;Name=SH03_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12800;old_locus_tag=SH03_12805 NZ_CP010441.1 Protein Homology CDS 2584353 2584973 . - 0 ID=cds2491;Parent=gene2557;Dbxref=Genbank:WP_001295484.1;Name=WP_001295484.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001295484.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2585060 2585467 . + . ID=gene2558;Name=SH03_RS12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12805;old_locus_tag=SH03_12810 NZ_CP010441.1 Protein Homology CDS 2585060 2585467 . + 0 ID=cds2492;Parent=gene2558;Dbxref=Genbank:WP_000781888.1;Name=WP_000781888.1;gbkey=CDS;product=CTP pyrophosphohydrolase;protein_id=WP_000781888.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2585433 2585705 . - . ID=gene2559;Name=SH03_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12810;old_locus_tag=SH03_12815 NZ_CP010441.1 Protein Homology CDS 2585433 2585705 . - 0 ID=cds2493;Parent=gene2559;Dbxref=Genbank:WP_000085240.1;Name=WP_000085240.1;gbkey=CDS;product=DUF1496 domain-containing protein;protein_id=WP_000085240.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2585941 2587284 . + . ID=gene2560;Name=SH03_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12815;old_locus_tag=SH03_12820 NZ_CP010441.1 Protein Homology CDS 2585941 2587284 . + 0 ID=cds2494;Parent=gene2560;Dbxref=Genbank:WP_000373021.1;Name=WP_000373021.1;Note=converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer;gbkey=CDS;product=NADP-specific glutamate dehydrogenase;protein_id=WP_000373021.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2587401 2588441 . - . ID=gene2561;Name=SH03_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12820;old_locus_tag=SH03_12825 NZ_CP010441.1 Protein Homology CDS 2587401 2588441 . - 0 ID=cds2495;Parent=gene2561;Dbxref=Genbank:WP_000756910.1;Name=WP_000756910.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000756910.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2588569 2590530 . - . ID=gene2562;Name=SH03_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12825;old_locus_tag=SH03_12830 NZ_CP010441.1 Protein Homology CDS 2588569 2590530 . - 0 ID=cds2496;Parent=gene2562;Dbxref=Genbank:WP_001235800.1;Name=WP_001235800.1;Note=decatenates replicating daughter chromosomes;gbkey=CDS;product=DNA topoisomerase 3;protein_id=WP_001235800.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2590535 2591578 . - . ID=gene2563;Name=SH03_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12830;old_locus_tag=SH03_12835 NZ_CP010441.1 Protein Homology CDS 2590535 2591578 . - 0 ID=cds2497;Parent=gene2563;Dbxref=Genbank:WP_001295485.1;Name=WP_001295485.1;Note=catalyzes the formation of selenophosphate from selenide and ATP;gbkey=CDS;product=selenophosphate synthase;protein_id=WP_001295485.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2591520 2591669 . - . ID=gene2564;Name=SH03_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12835;old_locus_tag=SH03_12840 NZ_CP010441.1 Protein Homology CDS 2591520 2591669 . - 0 ID=cds2498;Parent=gene2564;Dbxref=Genbank:WP_012602004.1;Name=WP_012602004.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012602004.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2591695 2592246 . - . ID=gene2565;Name=SH03_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12840;old_locus_tag=SH03_12845 NZ_CP010441.1 Protein Homology CDS 2591695 2592246 . - 0 ID=cds2499;Parent=gene2565;Dbxref=Genbank:WP_000339283.1;Name=WP_000339283.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_000339283.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2592300 2592464 . + . ID=gene2566;Name=SH03_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12845;old_locus_tag=SH03_12850 NZ_CP010441.1 Protein Homology CDS 2592300 2592464 . + 0 ID=cds2500;Parent=gene2566;Dbxref=Genbank:WP_032082967.1;Name=WP_032082967.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032082967.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2592407 2594263 . + . ID=gene2567;Name=SH03_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12850;old_locus_tag=SH03_12855 NZ_CP010441.1 Protein Homology CDS 2592407 2594263 . + 0 ID=cds2501;Parent=gene2567;Dbxref=Genbank:WP_001259810.1;Name=WP_001259810.1;Note=SppA%3B catalyzes the degradation of cleaved signal peptides%3B essential to maintain secretion of mature proteins across the membrane;gbkey=CDS;product=protease 4;protein_id=WP_001259810.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2594430 2595446 . + . ID=gene2568;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=SH03_RS12855;old_locus_tag=SH03_12860 NZ_CP010441.1 Protein Homology CDS 2594430 2595446 . + 0 ID=cds2502;Parent=gene2568;Dbxref=Genbank:WP_001170162.1;Name=WP_001170162.1;Note=converts asparagine to aspartate and ammonia;gbkey=CDS;gene=ansA;product=L-asparaginase 1;protein_id=WP_001170162.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2595457 2596098 . + . ID=gene2569;Name=SH03_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12860;old_locus_tag=SH03_12865 NZ_CP010441.1 Protein Homology CDS 2595457 2596098 . + 0 ID=cds2503;Parent=gene2569;Dbxref=Genbank:WP_001135066.1;Name=WP_001135066.1;Note=catalyzes the formation of nicotinate from nicotinamide in NAD biosynthesis and the formation of pyrazinoate from pyrazinamide;gbkey=CDS;product=pyrazinamidase/nicotinamidase;protein_id=WP_001135066.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2596191 2597549 . - . ID=gene2570;Name=SH03_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12865;old_locus_tag=SH03_12870 NZ_CP010441.1 Protein Homology CDS 2596191 2597549 . - 0 ID=cds2504;Parent=gene2570;Dbxref=Genbank:WP_000438807.1;Name=WP_000438807.1;gbkey=CDS;product=metabolite transporter;protein_id=WP_000438807.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2597666 2598424 . - . ID=gene2571;Name=SH03_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12870;old_locus_tag=SH03_12875 NZ_CP010441.1 Protein Homology CDS 2597666 2598424 . - 0 ID=cds2505;Parent=gene2571;Dbxref=Genbank:WP_000719096.1;Name=WP_000719096.1;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_000719096.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2598561 2599541 . - . ID=gene2572;Name=SH03_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12875;old_locus_tag=SH03_12880 NZ_CP010441.1 Protein Homology CDS 2598561 2599541 . - 0 ID=cds2506;Parent=gene2572;Dbxref=Genbank:WP_000723710.1;Name=WP_000723710.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_000723710.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2599551 2600498 . - . ID=gene2573;Name=SH03_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12880;old_locus_tag=SH03_12885 NZ_CP010441.1 Protein Homology CDS 2599551 2600498 . - 0 ID=cds2507;Parent=gene2573;Dbxref=Genbank:WP_000369231.1;Name=WP_000369231.1;gbkey=CDS;product=kinase;protein_id=WP_000369231.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2600503 2601339 . - . ID=gene2574;Name=SH03_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12885;old_locus_tag=SH03_12890 NZ_CP010441.1 Protein Homology CDS 2600503 2601339 . - 0 ID=cds2508;Parent=gene2574;Dbxref=Genbank:WP_000878893.1;Name=WP_000878893.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000878893.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2601360 2602403 . - . ID=gene2575;Name=SH03_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12890;old_locus_tag=SH03_12895 NZ_CP010441.1 Protein Homology CDS 2601360 2602403 . - 0 ID=cds2509;Parent=gene2575;Dbxref=Genbank:WP_000798110.1;Name=WP_000798110.1;gbkey=CDS;product=Zn-dependent NAD(P)-binding oxidoreductase;protein_id=WP_000798110.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2602420 2603799 . - . ID=gene2576;Name=SH03_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12895;old_locus_tag=SH03_12900 NZ_CP010441.1 Protein Homology CDS 2602420 2603799 . - 0 ID=cds2510;Parent=gene2576;Dbxref=Genbank:WP_000435292.1;Name=WP_000435292.1;gbkey=CDS;product=MFS sugar transporter membrane protein;protein_id=WP_000435292.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2603826 2604902 . - . ID=gene2577;Name=SH03_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12900;old_locus_tag=SH03_12905 NZ_CP010441.1 Protein Homology CDS 2603826 2604902 . - 0 ID=cds2511;Parent=gene2577;Dbxref=Genbank:WP_000645221.1;Name=WP_000645221.1;gbkey=CDS;product=Zn-dependent NAD(P)-binding oxidoreductase;protein_id=WP_000645221.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2605272 2605544 . - . ID=gene2578;Name=SH03_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12905;old_locus_tag=SH03_12910 NZ_CP010441.1 Protein Homology CDS 2605272 2605544 . - 0 ID=cds2512;Parent=gene2578;Dbxref=Genbank:WP_001300415.1;Name=WP_001300415.1;gbkey=CDS;product=DUF1315 domain-containing protein;protein_id=WP_001300415.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2605586 2605999 . - . ID=gene2579;Name=SH03_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12910;old_locus_tag=SH03_12915 NZ_CP010441.1 Protein Homology CDS 2605586 2605999 . - 0 ID=cds2513;Parent=gene2579;Dbxref=Genbank:WP_001284618.1;Name=WP_001284618.1;gbkey=CDS;product=peptide methionine sulfoxide reductase MsrB;protein_id=WP_001284618.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2606341 2607336 . + . ID=gene2580;Name=SH03_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12915;old_locus_tag=SH03_12920 NZ_CP010441.1 Protein Homology CDS 2606341 2607336 . + 0 ID=cds2514;Parent=gene2580;Dbxref=Genbank:WP_000153502.1;Name=WP_000153502.1;gbkey=CDS;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153502.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2607420 2608304 . + . ID=gene2581;Name=SH03_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12920;old_locus_tag=SH03_12925 NZ_CP010441.1 Protein Homology CDS 2607420 2608304 . + 0 ID=cds2515;Parent=gene2581;Dbxref=Genbank:WP_001335909.1;Name=WP_001335909.1;gbkey=CDS;product=D-hexose-6-phosphate epimerase-like protein;protein_id=WP_001335909.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2608352 2609206 . - . ID=gene2582;Name=SH03_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12925;old_locus_tag=SH03_12930 NZ_CP010441.1 Protein Homology CDS 2608352 2609206 . - 0 ID=cds2516;Parent=gene2582;Dbxref=Genbank:WP_001186371.1;Name=WP_001186371.1;gbkey=CDS;product=aldo-keto reductase;protein_id=WP_001186371.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2609296 2610042 . - . ID=gene2583;Name=SH03_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12930;old_locus_tag=SH03_12935 NZ_CP010441.1 Protein Homology CDS 2609296 2610042 . - 0 ID=cds2517;Parent=gene2583;Dbxref=Genbank:WP_000163771.1;Name=WP_000163771.1;Note=scaffolding protein for the murein polymerase MrcB and the lytic transglycosylase MltA;gbkey=CDS;product=MltA-interacting protein;protein_id=WP_000163771.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2610478 2612412 . + . ID=gene2584;Name=SH03_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12935;old_locus_tag=SH03_12940 NZ_CP010441.1 Protein Homology CDS 2610478 2612412 . + 0 ID=cds2518;Parent=gene2584;Dbxref=Genbank:WP_001019882.1;Name=WP_001019882.1;gbkey=CDS;product=protein kinase endogenous substrate unidentified%3B autokinase;protein_id=WP_001019882.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2612525 2613808 . + . ID=gene2585;Name=SH03_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12940;old_locus_tag=SH03_12945 NZ_CP010441.1 Protein Homology CDS 2612525 2613808 . + 0 ID=cds2519;Parent=gene2585;Dbxref=Genbank:WP_000219687.1;Name=WP_000219687.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000219687.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2614096 2615430 . + . ID=gene2586;Name=SH03_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12945;old_locus_tag=SH03_12950 NZ_CP010441.1 Protein Homology CDS 2614096 2615430 . + 0 ID=cds2520;Parent=gene2586;Dbxref=Genbank:WP_000537206.1;Name=WP_000537206.1;gbkey=CDS;product=membrane protein;protein_id=WP_000537206.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2615611 2617101 . + . ID=gene2587;Name=SH03_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12950;old_locus_tag=SH03_12955 NZ_CP010441.1 Protein Homology CDS 2615611 2617101 . + 0 ID=cds2521;Parent=gene2587;Dbxref=Genbank:WP_000766132.1;Name=WP_000766132.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_000766132.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2617144 2617647 . + . ID=gene2588;Name=SH03_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12955;old_locus_tag=SH03_12960 NZ_CP010441.1 Protein Homology CDS 2617144 2617647 . + 0 ID=cds2522;Parent=gene2588;Dbxref=Genbank:WP_000138043.1;Name=WP_000138043.1;gbkey=CDS;product=aminoacyl-tRNA editing domain protein;protein_id=WP_000138043.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2617648 2617800 . - . ID=gene2589;Name=SH03_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12960;old_locus_tag=SH03_12965 NZ_CP010441.1 Protein Homology CDS 2617648 2617800 . - 0 ID=cds2523;Parent=gene2589;Dbxref=Genbank:WP_038432591.1;Name=WP_038432591.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038432591.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2617922 2618368 . + . ID=gene2590;Name=SH03_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12965;old_locus_tag=SH03_12970 NZ_CP010441.1 Protein Homology CDS 2617922 2618368 . + 0 ID=cds2524;Parent=gene2590;Dbxref=Genbank:WP_000460707.1;Name=WP_000460707.1;gbkey=CDS;product=membrane protein;protein_id=WP_000460707.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2618325 2619146 . - . ID=gene2591;Name=SH03_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12970;old_locus_tag=SH03_12975 NZ_CP010441.1 Protein Homology CDS 2618325 2619146 . - 0 ID=cds2525;Parent=gene2591;Dbxref=Genbank:WP_000972248.1;Name=WP_000972248.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000972248.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2619243 2620424 . + . ID=gene2592;Name=SH03_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12975;old_locus_tag=SH03_12980 NZ_CP010441.1 Protein Homology CDS 2619243 2620424 . + 0 ID=cds2526;Parent=gene2592;Dbxref=Genbank:WP_000128491.1;Name=WP_000128491.1;gbkey=CDS;product=transporter;protein_id=WP_000128491.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2620479 2620826 . + . ID=gene2593;Name=SH03_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12980;old_locus_tag=SH03_12985 NZ_CP010441.1 Protein Homology CDS 2620479 2620826 . + 0 ID=cds2527;Parent=gene2593;Dbxref=Genbank:WP_001326526.1;Name=WP_001326526.1;gbkey=CDS;product=DUF488 domain-containing protein;protein_id=WP_001326526.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2620848 2621102 . - . ID=gene2594;Name=SH03_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12985;old_locus_tag=SH03_12990 NZ_CP010441.1 Protein Homology CDS 2620848 2621102 . - 0 ID=cds2528;Parent=gene2594;Dbxref=Genbank:WP_000691930.1;Name=WP_000691930.1;gbkey=CDS;product=DUF333 domain-containing protein;protein_id=WP_000691930.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2621285 2622310 . + . ID=gene2595;Name=SH03_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12990;old_locus_tag=SH03_12995 NZ_CP010441.1 Protein Homology CDS 2621285 2622310 . + 0 ID=cds2529;Parent=gene2595;Dbxref=Genbank:WP_001310896.1;Name=WP_001310896.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_001310896.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2622343 2622441 . + . ID=gene2596;Name=SH03_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS12995;old_locus_tag=SH03_13000 NZ_CP010441.1 Protein Homology CDS 2622343 2622441 . + 0 ID=cds2530;Parent=gene2596;Dbxref=Genbank:WP_001219350.1;Name=WP_001219350.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001219350.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2622577 2622825 . - . ID=gene2597;Name=SH03_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13000;old_locus_tag=SH03_13005 NZ_CP010441.1 Protein Homology CDS 2622577 2622825 . - 0 ID=cds2531;Parent=gene2597;Dbxref=Genbank:WP_000512153.1;Name=WP_000512153.1;gbkey=CDS;product=membrane protein;protein_id=WP_000512153.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2622973 2623155 . - . ID=gene2598;Name=SH03_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13005;old_locus_tag=SH03_13010 NZ_CP010441.1 Protein Homology CDS 2622973 2623155 . - 0 ID=cds2532;Parent=gene2598;Dbxref=Genbank:WP_000513737.1;Name=WP_000513737.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000513737.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2623159 2623518 . - . ID=gene2599;Name=SH03_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13010;old_locus_tag=SH03_13015 NZ_CP010441.1 Protein Homology CDS 2623159 2623518 . - 0 ID=cds2533;Parent=gene2599;Dbxref=Genbank:WP_000939317.1;Name=WP_000939317.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000939317.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2623691 2624329 . - . ID=gene2600;Name=SH03_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13015;old_locus_tag=SH03_13020 NZ_CP010441.1 Protein Homology CDS 2623691 2624329 . - 0 ID=cds2534;Parent=gene2600;Dbxref=Genbank:WP_000457206.1;Name=WP_000457206.1;gbkey=CDS;product=leucine efflux protein;protein_id=WP_000457206.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2624456 2625379 . - . ID=gene2601;Name=SH03_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13020;old_locus_tag=SH03_13025 NZ_CP010441.1 Protein Homology CDS 2624456 2625379 . - 0 ID=cds2535;Parent=gene2601;Dbxref=Genbank:WP_001061575.1;Name=WP_001061575.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001061575.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2625482 2626567 . + . ID=gene2602;Name=SH03_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13025;old_locus_tag=SH03_13030 NZ_CP010441.1 Protein Homology CDS 2625482 2626567 . + 0 ID=cds2536;Parent=gene2602;Dbxref=Genbank:WP_000978494.1;Name=WP_000978494.1;gbkey=CDS;product=malate dehydrogenase;protein_id=WP_000978494.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2626773 2628203 . + . ID=gene2603;Name=SH03_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13030;old_locus_tag=SH03_13035 NZ_CP010441.1 Protein Homology CDS 2626773 2628203 . + 0 ID=cds2537;Parent=gene2603;Dbxref=Genbank:WP_001326732.1;Name=WP_001326732.1;Note=member of the betaine%2C carnitine%2C choline transporter (BCCT) family%3B unknown function;gbkey=CDS;product=betaine/carnitine/choline BCCT transporter;protein_id=WP_001326732.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2628235 2629359 . + . ID=gene2604;Name=SH03_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13035;old_locus_tag=SH03_13040 NZ_CP010441.1 Protein Homology CDS 2628235 2629359 . + 0 ID=cds2538;Parent=gene2604;Dbxref=Genbank:WP_000067822.1;Name=WP_000067822.1;gbkey=CDS;product=ring hydroxylating dioxygenase subunit alpha;protein_id=WP_000067822.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2629415 2630380 . + . ID=gene2605;Name=SH03_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13040;old_locus_tag=SH03_13045 NZ_CP010441.1 Protein Homology CDS 2629415 2630380 . + 0 ID=cds2539;Parent=gene2605;Dbxref=Genbank:WP_001287026.1;Name=WP_001287026.1;gbkey=CDS;product=YeaWX dioxygenase subunit beta%2C reductase component;protein_id=WP_001287026.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2630434 2631549 . - . ID=gene2606;Name=SH03_RS13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13045;old_locus_tag=SH03_13050 NZ_CP010441.1 Protein Homology CDS 2630434 2631549 . - 0 ID=cds2540;Parent=gene2606;Dbxref=Genbank:WP_001307844.1;Name=WP_001307844.1;gbkey=CDS;product=ribonuclease D;protein_id=WP_001307844.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2631631 2633349 . - . ID=gene2607;Name=SH03_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13050;old_locus_tag=SH03_13055 NZ_CP010441.1 Protein Homology CDS 2631631 2633349 . - 0 ID=cds2541;Parent=gene2607;Dbxref=Genbank:WP_001295492.1;Name=WP_001295492.1;Note=Activates fatty acids by binding to coenzyme A;gbkey=CDS;product=long-chain fatty acid--CoA ligase;protein_id=WP_001295492.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2633521 2634102 . - . ID=gene2608;Name=SH03_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13055;old_locus_tag=SH03_13060 NZ_CP010441.1 Protein Homology CDS 2633521 2634102 . - 0 ID=cds2542;Parent=gene2608;Dbxref=Genbank:WP_000290576.1;Name=WP_000290576.1;gbkey=CDS;product=Slp family lipoprotein%2C RpoE-regulated;protein_id=WP_000290576.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2634142 2634837 . - . ID=gene2609;Name=SH03_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13060;old_locus_tag=SH03_13065 NZ_CP010441.1 Protein Homology CDS 2634142 2634837 . - 0 ID=cds2543;Parent=gene2609;Dbxref=Genbank:WP_001220966.1;Name=WP_001220966.1;gbkey=CDS;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaB;protein_id=WP_001220966.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2634895 2636805 . - . ID=gene2610;Name=SH03_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13065;old_locus_tag=SH03_13070 NZ_CP010441.1 Protein Homology CDS 2634895 2636805 . - 0 ID=cds2544;Parent=gene2610;Dbxref=Genbank:WP_038432595.1;Name=WP_038432595.1;gbkey=CDS;product=ATP-dependent helicase;protein_id=WP_038432595.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2636937 2637281 . + . ID=gene2611;Name=SH03_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13070;old_locus_tag=SH03_13075 NZ_CP010441.1 Protein Homology CDS 2636937 2637281 . + 0 ID=cds2545;Parent=gene2611;Dbxref=Genbank:WP_001295493.1;Name=WP_001295493.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001295493.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2637703 2638002 . + . ID=gene2612;Name=SH03_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13075;old_locus_tag=SH03_13080 NZ_CP010441.1 Protein Homology CDS 2637703 2638002 . + 0 ID=cds2546;Parent=gene2612;Dbxref=Genbank:WP_001111995.1;Name=WP_001111995.1;gbkey=CDS;product=DUF1889 domain-containing protein;protein_id=WP_001111995.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2638122 2638301 . - . ID=gene2613;Name=SH03_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13080;old_locus_tag=SH03_13085 NZ_CP010441.1 Protein Homology CDS 2638122 2638301 . - 0 ID=cds2547;Parent=gene2613;Dbxref=Genbank:WP_000457334.1;Name=WP_000457334.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000457334.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2638375 2639736 . + . ID=gene2614;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=SH03_RS13085;old_locus_tag=SH03_13090 NZ_CP010441.1 Protein Homology CDS 2638375 2639736 . + 0 ID=cds2548;Parent=gene2614;Dbxref=Genbank:WP_000855022.1;Name=WP_000855022.1;Note=para-aminobenzoate synthase component 1%3B catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine;gbkey=CDS;gene=pabB;product=aminodeoxychorismate synthase component I;protein_id=WP_000855022.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2639740 2640318 . + . ID=gene2615;Name=SH03_RS13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13090;old_locus_tag=SH03_13095 NZ_CP010441.1 Protein Homology CDS 2639740 2640318 . + 0 ID=cds2549;Parent=gene2615;Dbxref=Genbank:WP_000456715.1;Name=WP_000456715.1;gbkey=CDS;product=CoA pyrophosphohydrolase weak 3-phosphohydroxypyruvate phosphatase;protein_id=WP_000456715.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2640502 2641866 . + . ID=gene2616;Name=SH03_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13095;old_locus_tag=SH03_13100 NZ_CP010441.1 Protein Homology CDS 2640502 2641866 . + 0 ID=cds2550;Parent=gene2616;Dbxref=Genbank:WP_000624298.1;Name=WP_000624298.1;Note=catalyzes the formation of pyruvate from serine;gbkey=CDS;product=L-serine dehydratase 1;protein_id=WP_000624298.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2641997 2643595 . + . ID=gene2617;Name=SH03_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13100;old_locus_tag=SH03_13105 NZ_CP010441.1 Protein Homology CDS 2641997 2643595 . + 0 ID=cds2551;Parent=gene2617;Dbxref=Genbank:WP_001295494.1;Name=WP_001295494.1;gbkey=CDS;product=cyclic-di-GMP phosphodiesterase;protein_id=WP_001295494.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2643599 2645155 . - . ID=gene2618;Name=SH03_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13105;old_locus_tag=SH03_13110 NZ_CP010441.1 Protein Homology CDS 2643599 2645155 . - 0 ID=cds2552;Parent=gene2618;Dbxref=Genbank:WP_000394983.1;Name=WP_000394983.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000394983.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2645143 2645352 . - . ID=gene2619;Name=SH03_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13110;old_locus_tag=SH03_13115 NZ_CP010441.1 Protein Homology CDS 2645143 2645352 . - 0 ID=cds2553;Parent=gene2619;Dbxref=Genbank:WP_001306763.1;Name=WP_001306763.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001306763.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2645618 2646589 . + . ID=gene2620;Name=SH03_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13115;old_locus_tag=SH03_13120 NZ_CP010441.1 Protein Homology CDS 2645618 2646589 . + 0 ID=cds2554;Parent=gene2620;Dbxref=Genbank:WP_000150543.1;Name=WP_000150543.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate;gbkey=CDS;product=PTS mannose EIIAB component;protein_id=WP_000150543.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2646652 2647452 . + . ID=gene2621;Name=SH03_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13120;old_locus_tag=SH03_13125 NZ_CP010441.1 Protein Homology CDS 2646652 2647452 . + 0 ID=cds2555;Parent=gene2621;Dbxref=Genbank:WP_000406926.1;Name=WP_000406926.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site;gbkey=CDS;product=mannose permease IIC component;protein_id=WP_000406926.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2647465 2648316 . + . ID=gene2622;Name=SH03_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13125;old_locus_tag=SH03_13130 NZ_CP010441.1 Protein Homology CDS 2647465 2648316 . + 0 ID=cds2556;Parent=gene2622;Dbxref=Genbank:WP_000228655.1;Name=WP_000228655.1;Note=hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IID with IIC forms the translocation channel;gbkey=CDS;product=mannose permease IID component;protein_id=WP_000228655.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2648371 2648829 . + . ID=gene2623;Name=SH03_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13130;old_locus_tag=SH03_13135 NZ_CP010441.1 Protein Homology CDS 2648371 2648829 . + 0 ID=cds2557;Parent=gene2623;Dbxref=Genbank:WP_000156255.1;Name=WP_000156255.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000156255.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2649016 2649261 . + . ID=gene2624;Name=SH03_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13135;old_locus_tag=SH03_13140 NZ_CP010441.1 Protein Homology CDS 2649016 2649261 . + 0 ID=cds2558;Parent=gene2624;Dbxref=Genbank:WP_012602006.1;Name=WP_012602006.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012602006.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2649258 2649824 . + . ID=gene2625;Name=SH03_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13140;old_locus_tag=SH03_13145 NZ_CP010441.1 Protein Homology CDS 2649258 2649824 . + 0 ID=cds2559;Parent=gene2625;Dbxref=Genbank:WP_001296134.1;Name=WP_001296134.1;Note=membrane protein YebN;gbkey=CDS;product=manganese efflux pump MntP;protein_id=WP_001296134.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2649821 2650630 . - . ID=gene2626;Name=rrmA;gbkey=Gene;gene=rrmA;gene_biotype=protein_coding;locus_tag=SH03_RS13145;old_locus_tag=SH03_13150 NZ_CP010441.1 Protein Homology CDS 2649821 2650630 . - 0 ID=cds2560;Parent=gene2626;Dbxref=Genbank:WP_000010115.1;Name=WP_000010115.1;Note=methylates the guanosine in position 745 of 23S rRNA%3B required for translation and cell growth;gbkey=CDS;gene=rrmA;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_000010115.1;transl_table=11 NZ_CP010441.1 cmsearch region 2650721 2651181 . - . ID=id148;Note=cspA;gbkey=misc_feature NZ_CP010441.1 RefSeq gene 2650796 2651005 . - . ID=gene2627;Name=SH03_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13150;old_locus_tag=SH03_13155 NZ_CP010441.1 Protein Homology CDS 2650796 2651005 . - 0 ID=cds2561;Parent=gene2627;Dbxref=Genbank:WP_001062678.1;Name=WP_001062678.1;gbkey=CDS;product=cold-shock protein CspC;protein_id=WP_001062678.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2651018 2651161 . - . ID=gene2628;Name=SH03_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13155;old_locus_tag=SH03_13160 NZ_CP010441.1 Protein Homology CDS 2651018 2651161 . - 0 ID=cds2562;Parent=gene2628;Dbxref=Genbank:WP_001295496.1;Name=WP_001295496.1;gbkey=CDS;product=DUF2527 domain-containing protein;protein_id=WP_001295496.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2651123 2651329 . + . ID=gene2629;Name=SH03_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13160;old_locus_tag=SH03_13165 NZ_CP010441.1 Protein Homology CDS 2651123 2651329 . + 0 ID=cds2563;Parent=gene2629;Dbxref=Genbank:WP_001308705.1;Name=WP_001308705.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001308705.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2651831 2652118 . - . ID=gene2630;Name=SH03_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13165;old_locus_tag=SH03_13170 NZ_CP010441.1 Protein Homology CDS 2651831 2652118 . - 0 ID=cds2564;Parent=gene2630;Dbxref=Genbank:WP_001006866.1;Name=WP_001006866.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001006866.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2652193 2652336 . - . ID=gene2631;Name=SH03_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13170;old_locus_tag=SH03_13175 NZ_CP010441.1 Protein Homology CDS 2652193 2652336 . - 0 ID=cds2565;Parent=gene2631;Dbxref=Genbank:WP_000714550.1;Name=WP_000714550.1;gbkey=CDS;product=PhoP family transcriptional regulator;protein_id=WP_000714550.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2652495 2652734 . + . ID=gene2632;Name=SH03_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13175;old_locus_tag=SH03_13180 NZ_CP010441.1 Protein Homology CDS 2652495 2652734 . + 0 ID=cds2566;Parent=gene2632;Dbxref=Genbank:WP_001211011.1;Name=WP_001211011.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001211011.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2652878 2653669 . - . ID=gene2633;Name=SH03_RS13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13180;old_locus_tag=SH03_13185 NZ_CP010441.1 Protein Homology CDS 2652878 2653669 . - 0 ID=cds2567;Parent=gene2633;Dbxref=Genbank:WP_001262203.1;Name=WP_001262203.1;Note=regulates the genes involved in 2-keto-3-deoxy gluconate transport and catabolism;gbkey=CDS;product=transcriptional regulator KdgR;protein_id=WP_001262203.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2653846 2655219 . + . ID=gene2634;Name=SH03_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13185;old_locus_tag=SH03_13190 NZ_CP010441.1 Protein Homology CDS 2653846 2655219 . + 0 ID=cds2568;Parent=gene2634;Dbxref=Genbank:WP_001127216.1;Name=WP_001127216.1;gbkey=CDS;product=transporter;protein_id=WP_001127216.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2655265 2656146 . - . ID=gene2635;Name=SH03_RS13190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS13190;pseudo=true NZ_CP010441.1 Protein Homology CDS 2655265 2656146 . - 0 ID=cds2569;Parent=gene2635;Note=metalloprotease;gbkey=CDS;product=heat-shock protein HtpX;pseudo=true;transl_except=(pos:complement(2655499..2655501)%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq gene 2656338 2658386 . - . ID=gene2636;Name=SH03_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13195;old_locus_tag=SH03_13200 NZ_CP010441.1 Protein Homology CDS 2656338 2658386 . - 0 ID=cds2570;Parent=gene2636;Dbxref=Genbank:WP_001055791.1;Name=WP_001055791.1;Note=Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3;gbkey=CDS;product=tail-specific protease;protein_id=WP_001055791.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2658406 2659104 . - . ID=gene2637;Name=SH03_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13200;old_locus_tag=SH03_13205 NZ_CP010441.1 Protein Homology CDS 2658406 2659104 . - 0 ID=cds2571;Parent=gene2637;Dbxref=Genbank:WP_000431381.1;Name=WP_000431381.1;Note=affects solute and DNA transport through an unknown mechanism;gbkey=CDS;product=RNA chaperone ProQ;protein_id=WP_000431381.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2659201 2659698 . - . ID=gene2638;Name=SH03_RS13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13205;old_locus_tag=SH03_13210 NZ_CP010441.1 Protein Homology CDS 2659201 2659698 . - 0 ID=cds2572;Parent=gene2638;Dbxref=Genbank:WP_001043877.1;Name=WP_001043877.1;gbkey=CDS;product=methionine-R-sulfoxide reductase;protein_id=WP_001043877.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2659828 2661111 . + . ID=gene2639;Name=SH03_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13210;old_locus_tag=SH03_13215 NZ_CP010441.1 Protein Homology CDS 2659828 2661111 . + 0 ID=cds2573;Parent=gene2639;Dbxref=Genbank:WP_001207282.1;Name=WP_001207282.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001207282.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2661080 2663713 . + . ID=gene2640;Name=SH03_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13215;old_locus_tag=SH03_13220 NZ_CP010441.1 Protein Homology CDS 2661080 2663713 . + 0 ID=cds2574;Parent=gene2640;Dbxref=Genbank:WP_001326728.1;Name=WP_001326728.1;gbkey=CDS;product=MCE domain protein;protein_id=WP_001326728.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2663793 2665232 . + . ID=gene2641;Name=yebU;gbkey=Gene;gene=yebU;gene_biotype=pseudogene;locus_tag=SH03_RS13220;pseudo=true NZ_CP010441.1 Protein Homology CDS 2663793 2665232 . + 0 ID=cds2575;Parent=gene2641;Note=in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA;gbkey=CDS;gene=yebU;product=RNA methyltransferase RsmF;pseudo=true;transl_except=(pos:2664192..2664194%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq gene 2665350 2665586 . + . ID=gene2642;Name=SH03_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13225;old_locus_tag=SH03_13230 NZ_CP010441.1 Protein Homology CDS 2665350 2665586 . + 0 ID=cds2576;Parent=gene2642;Dbxref=Genbank:WP_001295499.1;Name=WP_001295499.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001295499.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2665691 2665882 . + . ID=gene2643;Name=SH03_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13230;old_locus_tag=SH03_13235 NZ_CP010441.1 Protein Homology CDS 2665691 2665882 . + 0 ID=cds2577;Parent=gene2643;Dbxref=Genbank:WP_000457842.1;Name=WP_000457842.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000457842.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2665883 2666539 . - . ID=gene2644;Name=SH03_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13235;old_locus_tag=SH03_13240 NZ_CP010441.1 Protein Homology CDS 2665883 2666539 . - 0 ID=cds2578;Parent=gene2644;Dbxref=Genbank:WP_000812724.1;Name=WP_000812724.1;gbkey=CDS;product=serine/threonine-protein phosphatase 1;protein_id=WP_000812724.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2666764 2666850 . - . ID=gene2645;Name=SH03_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13240;old_locus_tag=SH03_13245 NZ_CP010441.1 Protein Homology CDS 2666764 2666850 . - 0 ID=cds2579;Parent=gene2645;Dbxref=Genbank:WP_000214009.1;Name=WP_000214009.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000214009.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2666935 2667273 . - . ID=gene2646;Name=SH03_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13245;old_locus_tag=SH03_13250 NZ_CP010441.1 Protein Homology CDS 2666935 2667273 . - 0 ID=cds2580;Parent=gene2646;Dbxref=Genbank:WP_001380520.1;Name=WP_001380520.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001380520.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2667289 2668161 . - . ID=gene2647;Name=SH03_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13250;old_locus_tag=SH03_13255 NZ_CP010441.1 Protein Homology CDS 2667289 2668161 . - 0 ID=cds2581;Parent=gene2647;Dbxref=Genbank:WP_000879289.1;Name=WP_000879289.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000879289.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2668165 2668539 . - . ID=gene2648;Name=SH03_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13255;old_locus_tag=SH03_13260 NZ_CP010441.1 Protein Homology CDS 2668165 2668539 . - 0 ID=cds2582;Parent=gene2648;Dbxref=Genbank:WP_000168747.1;Name=WP_000168747.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000168747.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2668678 2668908 . + . ID=gene2649;Name=SH03_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13260;old_locus_tag=SH03_13265 NZ_CP010441.1 Protein Homology CDS 2668678 2668908 . + 0 ID=cds2583;Parent=gene2649;Dbxref=Genbank:WP_000916763.1;Name=WP_000916763.1;gbkey=CDS;product=DNA polymerase III subunit theta;protein_id=WP_000916763.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2669010 2669666 . + . ID=gene2650;Name=SH03_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13265;old_locus_tag=SH03_13270 NZ_CP010441.1 Protein Homology CDS 2669010 2669666 . + 0 ID=cds2584;Parent=gene2650;Dbxref=Genbank:WP_000011658.1;Name=WP_000011658.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000011658.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2669690 2670352 . + . ID=gene2651;Name=SH03_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13270;old_locus_tag=SH03_13275 NZ_CP010441.1 Protein Homology CDS 2669690 2670352 . + 0 ID=cds2585;Parent=gene2651;Dbxref=Genbank:WP_000944256.1;Name=WP_000944256.1;Note=3'-5' exonuclease activity on single or double-strand DNA;gbkey=CDS;product=exodeoxyribonuclease 10;protein_id=WP_000944256.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2670349 2672409 . - . ID=gene2652;Name=SH03_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13275;old_locus_tag=SH03_13280 NZ_CP010441.1 Protein Homology CDS 2670349 2672409 . - 0 ID=cds2586;Parent=gene2652;Dbxref=Genbank:WP_000936927.1;Name=WP_000936927.1;Note=PtrB%3B oligopeptidase that cleaves peptide bonds following arginine and lysine residues;gbkey=CDS;product=protease 2;protein_id=WP_000936927.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2672618 2673277 . - . ID=gene2653;Name=SH03_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13280;old_locus_tag=SH03_13285 NZ_CP010441.1 Protein Homology CDS 2672618 2673277 . - 0 ID=cds2587;Parent=gene2653;Dbxref=Genbank:WP_000024757.1;Name=WP_000024757.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000024757.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2673337 2673447 . + . ID=gene2654;Name=SH03_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13285;old_locus_tag=SH03_13290 NZ_CP010441.1 Protein Homology CDS 2673337 2673447 . + 0 ID=cds2588;Parent=gene2654;Dbxref=Genbank:WP_000275187.1;Name=WP_000275187.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000275187.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2673604 2673960 . - . ID=gene2655;Name=SH03_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13290;old_locus_tag=SH03_13295 NZ_CP010441.1 Protein Homology CDS 2673604 2673960 . - 0 ID=cds2589;Parent=gene2655;Dbxref=Genbank:WP_001350516.1;Name=WP_001350516.1;Note=secreted protein%3B unknown function;gbkey=CDS;product=hypothetical protein;protein_id=WP_001350516.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2674027 2674317 . - . ID=gene2656;Name=SH03_RS13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13295;old_locus_tag=SH03_13300 NZ_CP010441.1 Protein Homology CDS 2674027 2674317 . - 0 ID=cds2590;Parent=gene2656;Dbxref=Genbank:WP_000257738.1;Name=WP_000257738.1;gbkey=CDS;product=DNA damage-inducible protein;protein_id=WP_000257738.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2674451 2675629 . + . ID=gene2657;Name=SH03_RS13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13300;old_locus_tag=SH03_13305 NZ_CP010441.1 Protein Homology CDS 2674451 2675629 . + 0 ID=cds2591;Parent=gene2657;Dbxref=Genbank:WP_000173484.1;Name=WP_000173484.1;gbkey=CDS;product=phosphoribosylglycinamide formyltransferase 2;protein_id=WP_000173484.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2675685 2676326 . - . ID=gene2658;Name=SH03_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13305;old_locus_tag=SH03_13310 NZ_CP010441.1 Protein Homology CDS 2675685 2676326 . - 0 ID=cds2592;Parent=gene2658;Dbxref=Genbank:WP_000800512.1;Name=WP_000800512.1;Note=catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate%3B or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate;gbkey=CDS;product=KHG/KDPG aldolase;protein_id=WP_000800512.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2676363 2678174 . - . ID=gene2659;Name=SH03_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13310;old_locus_tag=SH03_13315 NZ_CP010441.1 Protein Homology CDS 2676363 2678174 . - 0 ID=cds2593;Parent=gene2659;Dbxref=Genbank:WP_001069467.1;Name=WP_001069467.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate;gbkey=CDS;product=phosphogluconate dehydratase;protein_id=WP_001069467.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2678409 2679884 . - . ID=gene2660;Name=SH03_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13315;old_locus_tag=SH03_13320 NZ_CP010441.1 Protein Homology CDS 2678409 2679884 . - 0 ID=cds2594;Parent=gene2660;Dbxref=Genbank:WP_000301727.1;Name=WP_000301727.1;Note=catalyzes the formation of D-glucono-1%2C5-lactone 6-phosphate from D-glucose 6-phosphate;gbkey=CDS;product=glucose-6-phosphate 1-dehydrogenase;protein_id=WP_000301727.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2680050 2680199 . - . ID=gene2661;Name=SH03_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13320;old_locus_tag=SH03_13325 NZ_CP010441.1 Protein Homology CDS 2680050 2680199 . - 0 ID=cds2595;Parent=gene2661;Dbxref=Genbank:WP_000155622.1;Name=WP_000155622.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000155622.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2680222 2681091 . + . ID=gene2662;Name=SH03_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13325;old_locus_tag=SH03_13330 NZ_CP010441.1 Protein Homology CDS 2680222 2681091 . + 0 ID=cds2596;Parent=gene2662;Dbxref=Genbank:WP_001056706.1;Name=WP_001056706.1;Note=Represses the expression of the zwf%2C eda%2C glp and gap;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001056706.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2681219 2682661 . + . ID=gene2663;Name=SH03_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13330;old_locus_tag=SH03_13335 NZ_CP010441.1 Protein Homology CDS 2681219 2682661 . + 0 ID=cds2597;Parent=gene2663;Dbxref=Genbank:WP_000091148.1;Name=WP_000091148.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=pyruvate kinase II;protein_id=WP_000091148.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2682792 2683763 . - . ID=gene2664;Name=SH03_RS13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13335;old_locus_tag=SH03_13340 NZ_CP010441.1 Protein Homology CDS 2682792 2683763 . - 0 ID=cds2598;Parent=gene2664;Dbxref=Genbank:WP_000448381.1;Name=WP_000448381.1;Note=Transfers myristate or laurate%2C activated on ACP%2C to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA;gbkey=CDS;product=lipid A biosynthesis myristoyltransferase;protein_id=WP_000448381.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2683883 2685205 . - . ID=gene2665;Name=SH03_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13340;old_locus_tag=SH03_13345 NZ_CP010441.1 Protein Homology CDS 2683883 2685205 . - 0 ID=cds2599;Parent=gene2665;Dbxref=Genbank:WP_001184045.1;Name=WP_001184045.1;gbkey=CDS;product=murein DD-endopeptidase MepM;protein_id=WP_001184045.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2685221 2686153 . - . ID=gene2666;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;gene_synonym=yebL;locus_tag=SH03_RS13345;old_locus_tag=SH03_13350 NZ_CP010441.1 Protein Homology CDS 2685221 2686153 . - 0 ID=cds2600;Parent=gene2666;Dbxref=Genbank:WP_001300644.1;Name=WP_001300644.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuA;product=zinc uptake system protein ZnuA;protein_id=WP_001300644.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2686232 2686987 . + . ID=gene2667;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;gene_synonym=yebM;locus_tag=SH03_RS13350;old_locus_tag=SH03_13355 NZ_CP010441.1 Protein Homology CDS 2686232 2686987 . + 0 ID=cds2601;Parent=gene2667;Dbxref=Genbank:WP_000202996.1;Name=WP_000202996.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuC;product=Mn2+/Zn2+ABC transporter ATP-binding protein;protein_id=WP_000202996.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2686984 2687769 . + . ID=gene2668;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;gene_synonym=yebI;locus_tag=SH03_RS13355;old_locus_tag=SH03_13360 NZ_CP010441.1 Protein Homology CDS 2686984 2687769 . + 0 ID=cds2602;Parent=gene2668;Dbxref=Genbank:WP_000571480.1;Name=WP_000571480.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuB;product=zinc uptake system membrane protein ZnuB;protein_id=WP_000571480.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2687916 2688926 . - . ID=gene2669;Name=SH03_RS13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13360;old_locus_tag=SH03_13365 NZ_CP010441.1 Protein Homology CDS 2687916 2688926 . - 0 ID=cds2603;Parent=gene2669;Dbxref=Genbank:WP_000568519.1;Name=WP_000568519.1;gbkey=CDS;product=Holliday junction DNA helicase RuvB;protein_id=WP_000568519.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2688935 2689546 . - . ID=gene2670;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=SH03_RS13365;old_locus_tag=SH03_13370 NZ_CP010441.1 Protein Homology CDS 2688935 2689546 . - 0 ID=cds2604;Parent=gene2670;Dbxref=Genbank:WP_000580323.1;Name=WP_000580323.1;Note=plays an essential role in ATP-dependent branch migration of the Holliday junction;gbkey=CDS;gene=ruvA;product=Holliday junction DNA helicase RuvA;protein_id=WP_000580323.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2689821 2690423 . + . ID=gene2671;Name=SH03_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13370;old_locus_tag=SH03_13375 NZ_CP010441.1 Protein Homology CDS 2689821 2690423 . + 0 ID=cds2605;Parent=gene2671;Dbxref=Genbank:WP_001024932.1;Name=WP_001024932.1;gbkey=CDS;product=DUF830 domain-containing protein;protein_id=WP_001024932.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2690425 2690946 . - . ID=gene2672;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=SH03_RS13375;old_locus_tag=SH03_13380 NZ_CP010441.1 Protein Homology CDS 2690425 2690946 . - 0 ID=cds2606;Parent=gene2672;Dbxref=Genbank:WP_001295503.1;Name=WP_001295503.1;Note=endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity;gbkey=CDS;gene=ruvC;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_001295503.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2690981 2691721 . - . ID=gene2673;Name=SH03_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13380;old_locus_tag=SH03_13385 NZ_CP010441.1 Protein Homology CDS 2690981 2691721 . - 0 ID=cds2607;Parent=gene2673;Dbxref=Genbank:WP_000907248.1;Name=WP_000907248.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000907248.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2691750 2692232 . - . ID=gene2674;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=SH03_RS13385;old_locus_tag=SH03_13390 NZ_CP010441.1 Protein Homology CDS 2691750 2692232 . - 0 ID=cds2608;Parent=gene2674;Dbxref=Genbank:WP_001289128.1;Name=WP_001289128.1;Note=catalyzes the formation of dihydroneopterin phosphate from dihydroneopterin triphosphate;gbkey=CDS;gene=nudB;product=dihydroneopterin triphosphate pyrophosphatase;protein_id=WP_001289128.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2692320 2694092 . - . ID=gene2675;Name=SH03_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13390;old_locus_tag=SH03_13395 NZ_CP010441.1 Protein Homology CDS 2692320 2694092 . - 0 ID=cds2609;Parent=gene2675;Dbxref=Genbank:WP_001258678.1;Name=WP_001258678.1;gbkey=CDS;product=aspartate--tRNA ligase;protein_id=WP_001258678.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2694402 2694968 . + . ID=gene2676;Name=SH03_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13395;old_locus_tag=SH03_13400 NZ_CP010441.1 Protein Homology CDS 2694402 2694968 . + 0 ID=cds2610;Parent=gene2676;Dbxref=Genbank:WP_000891621.1;Name=WP_000891621.1;gbkey=CDS;product=isochorismatase;protein_id=WP_000891621.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2694965 2695783 . + . ID=gene2677;Name=SH03_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13400;old_locus_tag=SH03_13405 NZ_CP010441.1 Protein Homology CDS 2694965 2695783 . + 0 ID=cds2611;Parent=gene2677;Dbxref=Genbank:WP_000639274.1;Name=WP_000639274.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000639274.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2695836 2696231 . + . ID=gene2678;Name=SH03_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13405;old_locus_tag=SH03_13410 NZ_CP010441.1 Protein Homology CDS 2695836 2696231 . + 0 ID=cds2612;Parent=gene2678;Dbxref=Genbank:WP_000252980.1;Name=WP_000252980.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000252980.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2696272 2697015 . + . ID=gene2679;Name=SH03_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13410;old_locus_tag=SH03_13415 NZ_CP010441.1 Protein Homology CDS 2696272 2697015 . + 0 ID=cds2613;Parent=gene2679;Dbxref=Genbank:WP_000019590.1;Name=WP_000019590.1;Note=catalyzes the conversion of 5-methoxyuridine to uridine-5-oxyacetic acid in tRNA;gbkey=CDS;product=tRNA (cmo5U34)-methyltransferase;protein_id=WP_000019590.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2697012 2697983 . + . ID=gene2680;Name=SH03_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13415;old_locus_tag=SH03_13420 NZ_CP010441.1 Protein Homology CDS 2697012 2697983 . + 0 ID=cds2614;Parent=gene2680;Dbxref=Genbank:WP_000564725.1;Name=WP_000564725.1;Note=catalyzes the conversion of 5-hydroxyuridine to 5-methoxyuridine in tRNA;gbkey=CDS;product=tRNA (mo5U34)-methyltransferase;protein_id=WP_000564725.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2698148 2700577 . - . ID=gene2681;Name=SH03_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13420;old_locus_tag=SH03_13425 NZ_CP010441.1 Protein Homology CDS 2698148 2700577 . - 0 ID=cds2615;Parent=gene2681;Dbxref=Genbank:WP_000176781.1;Name=WP_000176781.1;Note=catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine;gbkey=CDS;product=Trimethylamine-N-oxide reductase 2;protein_id=WP_000176781.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2700602 2701702 . - . ID=gene2682;Name=SH03_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13425;old_locus_tag=SH03_13430 NZ_CP010441.1 Protein Homology CDS 2700602 2701702 . - 0 ID=cds2616;Parent=gene2682;Dbxref=Genbank:WP_001214331.1;Name=WP_001214331.1;gbkey=CDS;product=cytochrome c-type protein TorY;protein_id=WP_001214331.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2702090 2702836 . - . ID=gene2683;Name=SH03_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13430;old_locus_tag=SH03_13435 NZ_CP010441.1 Protein Homology CDS 2702090 2702836 . - 0 ID=cds2617;Parent=gene2683;Dbxref=Genbank:WP_001185741.1;Name=WP_001185741.1;gbkey=CDS;product=copper homeostasis protein CutC;protein_id=WP_001185741.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2702850 2703416 . - . ID=gene2684;Name=SH03_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13435;old_locus_tag=SH03_13440 NZ_CP010441.1 Protein Homology CDS 2702850 2703416 . - 0 ID=cds2618;Parent=gene2684;Dbxref=Genbank:WP_001326725.1;Name=WP_001326725.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001326725.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2703632 2705365 . + . ID=gene2685;Name=SH03_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13440;old_locus_tag=SH03_13445 NZ_CP010441.1 Protein Homology CDS 2703632 2705365 . + 0 ID=cds2619;Parent=gene2685;Dbxref=Genbank:WP_001025322.1;Name=WP_001025322.1;gbkey=CDS;product=arginine--tRNA ligase;protein_id=WP_001025322.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2705542 2706030 . + . ID=gene2686;Name=SH03_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13445;old_locus_tag=SH03_13450 NZ_CP010441.1 Protein Homology CDS 2705542 2706030 . + 0 ID=cds2620;Parent=gene2686;Dbxref=Genbank:WP_001299676.1;Name=WP_001299676.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001299676.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2706150 2706542 . - . ID=gene2687;Name=SH03_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13450;old_locus_tag=SH03_13455 NZ_CP010441.1 Protein Homology CDS 2706150 2706542 . - 0 ID=cds2621;Parent=gene2687;Dbxref=Genbank:WP_001259583.1;Name=WP_001259583.1;gbkey=CDS;product=flagellar biosynthesis protein FlhE;protein_id=WP_001259583.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2706542 2708620 . - . ID=gene2688;Name=SH03_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13455;old_locus_tag=SH03_13460 NZ_CP010441.1 Protein Homology CDS 2706542 2708620 . - 0 ID=cds2622;Parent=gene2688;Dbxref=Genbank:WP_000066951.1;Name=WP_000066951.1;gbkey=CDS;product=flagellar biosynthesis protein FlhA;protein_id=WP_000066951.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2708613 2709761 . - . ID=gene2689;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=SH03_RS13460;old_locus_tag=SH03_13465 NZ_CP010441.1 Protein Homology CDS 2708613 2709761 . - 0 ID=cds2623;Parent=gene2689;Dbxref=Genbank:WP_001278954.1;Name=WP_001278954.1;Note=membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export;gbkey=CDS;gene=flhB;product=flagellar biosynthetic protein FlhB;protein_id=WP_001278954.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2709963 2710607 . - . ID=gene2690;Name=SH03_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13465;old_locus_tag=SH03_13470 NZ_CP010441.1 Protein Homology CDS 2709963 2710607 . - 0 ID=cds2624;Parent=gene2690;Dbxref=Genbank:WP_000983609.1;Name=WP_000983609.1;Note=cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation;gbkey=CDS;product=protein phosphatase CheZ;protein_id=WP_000983609.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2710618 2711007 . - . ID=gene2691;Name=SH03_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13470;old_locus_tag=SH03_13475 NZ_CP010441.1 Protein Homology CDS 2710618 2711007 . - 0 ID=cds2625;Parent=gene2691;Dbxref=Genbank:WP_000763867.1;Name=WP_000763867.1;Note=chemotaxis regulator that%2C when phosphorylated%2C interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble;gbkey=CDS;product=chemotaxis protein CheY;protein_id=WP_000763867.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2711022 2712071 . - . ID=gene2692;Name=SH03_RS13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13475;old_locus_tag=SH03_13480 NZ_CP010441.1 Protein Homology CDS 2711022 2712071 . - 0 ID=cds2626;Parent=gene2692;Dbxref=Genbank:WP_000036361.1;Name=WP_000036361.1;Note=regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins;gbkey=CDS;product=two-component system protein-glutamate methylesterase response regulator;protein_id=WP_000036361.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2712074 2712934 . - . ID=gene2693;Name=SH03_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13480;old_locus_tag=SH03_13485 NZ_CP010441.1 Protein Homology CDS 2712074 2712934 . - 0 ID=cds2627;Parent=gene2693;Dbxref=Genbank:WP_000204337.1;Name=WP_000204337.1;Note=methylates the MCP;gbkey=CDS;product=chemotaxis protein methyltransferase;protein_id=WP_000204337.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2712953 2714554 . - . ID=gene2694;Name=SH03_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13485;old_locus_tag=SH03_13490 NZ_CP010441.1 Protein Homology CDS 2712953 2714554 . - 0 ID=cds2628;Parent=gene2694;Dbxref=Genbank:WP_000483239.1;Name=WP_000483239.1;Note=mediates taxis toward dipeptides;gbkey=CDS;product=methyl-accepting chemotaxis protein IV;protein_id=WP_000483239.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2714600 2716261 . - . ID=gene2695;Name=SH03_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13490;old_locus_tag=SH03_13495 NZ_CP010441.1 Protein Homology CDS 2714600 2716261 . - 0 ID=cds2629;Parent=gene2695;Dbxref=Genbank:WP_001297437.1;Name=WP_001297437.1;Note=serine sensor receptor;gbkey=CDS;product=methyl-accepting chemotaxis protein II;protein_id=WP_001297437.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2716406 2716909 . - . ID=gene2696;Name=SH03_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13495;old_locus_tag=SH03_13500 NZ_CP010441.1 Protein Homology CDS 2716406 2716909 . - 0 ID=cds2630;Parent=gene2696;Dbxref=Genbank:WP_000147302.1;Name=WP_000147302.1;gbkey=CDS;product=chemotaxis protein CheW;protein_id=WP_000147302.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2716930 2718888 . - . ID=gene2697;Name=SH03_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13500;old_locus_tag=SH03_13505 NZ_CP010441.1 Protein Homology CDS 2716930 2718888 . - 0 ID=cds2631;Parent=gene2697;Dbxref=Genbank:WP_000355059.1;Name=WP_000355059.1;gbkey=CDS;product=chemotaxis protein CheA;protein_id=WP_000355059.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2718899 2719825 . - . ID=gene2698;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=SH03_RS13505;old_locus_tag=SH03_13510 NZ_CP010441.1 Protein Homology CDS 2718899 2719825 . - 0 ID=cds2632;Parent=gene2698;Dbxref=Genbank:WP_000795630.1;Name=WP_000795630.1;Note=with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;gbkey=CDS;gene=motB;product=motility protein B;protein_id=WP_000795630.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2719822 2720709 . - . ID=gene2699;Name=SH03_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13510;old_locus_tag=SH03_13515 NZ_CP010441.1 Protein Homology CDS 2719822 2720709 . - 0 ID=cds2633;Parent=gene2699;Dbxref=Genbank:WP_000906340.1;Name=WP_000906340.1;Note=With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;gbkey=CDS;product=motility protein A;protein_id=WP_000906340.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2720836 2721414 . - . ID=gene2700;Name=SH03_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13515;old_locus_tag=SH03_13520 NZ_CP010441.1 Protein Homology CDS 2720836 2721414 . - 0 ID=cds2634;Parent=gene2700;Dbxref=Genbank:WP_001291603.1;Name=WP_001291603.1;Note=With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems;gbkey=CDS;product=flagellar transcriptional regulator FlhC;protein_id=WP_001291603.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2721417 2721767 . - . ID=gene2701;Name=SH03_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13520;old_locus_tag=SH03_13525 NZ_CP010441.1 Protein Homology CDS 2721417 2721767 . - 0 ID=cds2635;Parent=gene2701;Dbxref=Genbank:WP_001295647.1;Name=WP_001295647.1;Note=with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems;gbkey=CDS;product=flagellar transcriptional regulator FlhD;protein_id=WP_001295647.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2722547 2722975 . + . ID=gene2702;Name=SH03_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13525;old_locus_tag=SH03_13530 NZ_CP010441.1 Protein Homology CDS 2722547 2722975 . + 0 ID=cds2636;Parent=gene2702;Dbxref=Genbank:WP_000122416.1;Name=WP_000122416.1;Note=ppGpp-dependent%3B membrane-associated%2C stress protein produced under conditions of nutrient deprivation%2C osmotic shock and oxidative stress;gbkey=CDS;product=universal stress protein C;protein_id=WP_000122416.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2722982 2724406 . - . ID=gene2703;Name=SH03_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13530;old_locus_tag=SH03_13535 NZ_CP010441.1 Protein Homology CDS 2722982 2724406 . - 0 ID=cds2637;Parent=gene2703;Dbxref=Genbank:WP_001295646.1;Name=WP_001295646.1;gbkey=CDS;product=alpha%2Calpha-trehalose-phosphate synthase [UDP-forming];protein_id=WP_001295646.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2724381 2725181 . - . ID=gene2704;Name=SH03_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13535;old_locus_tag=SH03_13540 NZ_CP010441.1 Protein Homology CDS 2724381 2725181 . - 0 ID=cds2638;Parent=gene2704;Dbxref=Genbank:WP_001295645.1;Name=WP_001295645.1;Note=biosynthetic%3B catalyzes the formation of trehalose and phosphate from trehalose-6-phosphate%3B expression is increased under osmotic stress and induced during the transition to stationary phase and by decreased temperature;gbkey=CDS;product=trehalose-6-phosphate phosphatase;protein_id=WP_001295645.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2725348 2726334 . - . ID=gene2705;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=SH03_RS13540;old_locus_tag=SH03_13545 NZ_CP010441.1 Protein Homology CDS 2725348 2726334 . - 0 ID=cds2639;Parent=gene2705;Dbxref=Genbank:WP_000100205.1;Name=WP_000100205.1;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;gbkey=CDS;gene=araH;product=arabinose ABC transporter permease;protein_id=WP_000100205.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2726349 2727863 . - . ID=gene2706;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=SH03_RS13545;old_locus_tag=SH03_13550 NZ_CP010441.1 Protein Homology CDS 2726349 2727863 . - 0 ID=cds2640;Parent=gene2706;Dbxref=Genbank:WP_001187819.1;Name=WP_001187819.1;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;gbkey=CDS;gene=araG;product=arabinose import ATP-binding protein AraG;protein_id=WP_001187819.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2727933 2728922 . - . ID=gene2707;Name=SH03_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13550;old_locus_tag=SH03_13555 NZ_CP010441.1 Protein Homology CDS 2727933 2728922 . - 0 ID=cds2641;Parent=gene2707;Dbxref=Genbank:WP_000548675.1;Name=WP_000548675.1;Note=with AraGH is involved in the transport of arabinose into the cell;gbkey=CDS;product=L-arabinose-binding periplasmic protein;protein_id=WP_000548675.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2729719 2730222 . + . ID=gene2708;Name=SH03_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13555;old_locus_tag=SH03_13560 NZ_CP010441.1 Protein Homology CDS 2729719 2730222 . + 0 ID=cds2642;Parent=gene2708;Dbxref=Genbank:WP_038432597.1;Name=WP_038432597.1;Note=ferritin B%3B required for virulence in Salmonella%3B may be involved in repair of damaged Fe-S clusters;gbkey=CDS;product=ferritin;protein_id=WP_038432597.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2730301 2730552 . - . ID=gene2709;Name=SH03_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13560;old_locus_tag=SH03_13565 NZ_CP010441.1 Protein Homology CDS 2730301 2730552 . - 0 ID=cds2643;Parent=gene2709;Dbxref=Genbank:WP_000082127.1;Name=WP_000082127.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000082127.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2730664 2730810 . + . ID=gene2710;Name=SH03_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13565;old_locus_tag=SH03_13570 NZ_CP010441.1 Protein Homology CDS 2730664 2730810 . + 0 ID=cds2644;Parent=gene2710;Dbxref=Genbank:WP_001297814.1;Name=WP_001297814.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001297814.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2731016 2731339 . + . ID=gene2711;Name=SH03_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13570;old_locus_tag=SH03_13575 NZ_CP010441.1 Protein Homology CDS 2731016 2731339 . + 0 ID=cds2645;Parent=gene2711;Dbxref=Genbank:WP_001237869.1;Name=WP_001237869.1;gbkey=CDS;product=lipoprotein%2C function unknown;protein_id=WP_001237869.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2731510 2732007 . + . ID=gene2712;Name=SH03_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13575;old_locus_tag=SH03_13580 NZ_CP010441.1 Protein Homology CDS 2731510 2732007 . + 0 ID=cds2646;Parent=gene2712;Dbxref=Genbank:WP_000917208.1;Name=WP_000917208.1;Note=cytoplasmic iron storage protein;gbkey=CDS;product=non-heme ferritin;protein_id=WP_000917208.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2732045 2732284 . - . ID=gene2713;Name=SH03_RS13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13580;old_locus_tag=SH03_13585 NZ_CP010441.1 Protein Homology CDS 2732045 2732284 . - 0 ID=cds2647;Parent=gene2713;Dbxref=Genbank:WP_000377225.1;Name=WP_000377225.1;gbkey=CDS;product=DUF2492 domain-containing protein;protein_id=WP_000377225.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2732475 2733686 . + . ID=gene2714;Name=SH03_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13585;old_locus_tag=SH03_13590 NZ_CP010441.1 Protein Homology CDS 2732475 2733686 . + 0 ID=cds2648;Parent=gene2714;Dbxref=Genbank:WP_000797560.1;Name=WP_000797560.1;Note=tyrosine specific permease;gbkey=CDS;product=tyrosine-specific transporter;protein_id=WP_000797560.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2733748 2734413 . - . ID=gene2715;Name=SH03_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13590;old_locus_tag=SH03_13595 NZ_CP010441.1 Protein Homology CDS 2733748 2734413 . - 0 ID=cds2649;Parent=gene2715;Dbxref=Genbank:WP_000847902.1;Name=WP_000847902.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000847902.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2734609 2734695 . - . ID=gene2716;Name=SH03_RS13595;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS13595;old_locus_tag=SH03_13600 NZ_CP010441.1 tRNAscan-SE tRNA 2734609 2734695 . - . ID=rna66;Parent=gene2716;anticodon=(pos:complement(2734659..2734661));gbkey=tRNA;product=tRNA-Leu NZ_CP010441.1 tRNAscan-SE exon 2734609 2734695 . - . ID=id149;Parent=rna66;anticodon=(pos:complement(2734659..2734661));gbkey=tRNA;product=tRNA-Leu NZ_CP010441.1 RefSeq gene 2734708 2734781 . - . ID=gene2717;Name=SH03_RS13600;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS13600;old_locus_tag=SH03_13605 NZ_CP010441.1 tRNAscan-SE tRNA 2734708 2734781 . - . ID=rna67;Parent=gene2717;anticodon=(pos:complement(2734747..2734749));gbkey=tRNA;product=tRNA-Cys NZ_CP010441.1 tRNAscan-SE exon 2734708 2734781 . - . ID=id150;Parent=rna67;anticodon=(pos:complement(2734747..2734749));gbkey=tRNA;product=tRNA-Cys NZ_CP010441.1 RefSeq gene 2734836 2734911 . - . ID=gene2718;Name=SH03_RS13605;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS13605;old_locus_tag=SH03_13610 NZ_CP010441.1 tRNAscan-SE tRNA 2734836 2734911 . - . ID=rna68;Parent=gene2718;anticodon=(pos:complement(2734876..2734878));gbkey=tRNA;product=tRNA-Gly NZ_CP010441.1 tRNAscan-SE exon 2734836 2734911 . - . ID=id151;Parent=rna68;anticodon=(pos:complement(2734876..2734878));gbkey=tRNA;product=tRNA-Gly NZ_CP010441.1 RefSeq gene 2735063 2735611 . - . ID=gene2719;Name=SH03_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13610;old_locus_tag=SH03_13615 NZ_CP010441.1 Protein Homology CDS 2735063 2735611 . - 0 ID=cds2650;Parent=gene2719;Dbxref=Genbank:WP_001160187.1;Name=WP_001160187.1;gbkey=CDS;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_001160187.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2735668 2737500 . - . ID=gene2720;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=SH03_RS13615;old_locus_tag=SH03_13620 NZ_CP010441.1 Protein Homology CDS 2735668 2737500 . - 0 ID=cds2651;Parent=gene2720;Dbxref=Genbank:WP_001283421.1;Name=WP_001283421.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision;gbkey=CDS;gene=uvrC;product=UvrABC system protein C;protein_id=WP_001283421.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2737497 2738153 . - . ID=gene2721;Name=sirA;gbkey=Gene;gene=sirA;gene_biotype=protein_coding;gene_synonym=uvrY;locus_tag=SH03_RS13620;old_locus_tag=SH03_13625 NZ_CP010441.1 Protein Homology CDS 2737497 2738153 . - 0 ID=cds2652;Parent=gene2721;Dbxref=Genbank:WP_000611335.1;Name=WP_000611335.1;Note=in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system;gbkey=CDS;gene=sirA;product=transcriptional regulator;protein_id=WP_000611335.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2738449 2738625 . + . ID=gene2722;Name=SH03_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13625;old_locus_tag=SH03_13630 NZ_CP010441.1 Protein Homology CDS 2738449 2738625 . + 0 ID=cds2653;Parent=gene2722;Dbxref=Genbank:WP_000590347.1;Name=WP_000590347.1;gbkey=CDS;product=2-oxo acid dehydrogenase;protein_id=WP_000590347.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2738612 2738836 . + . ID=gene2723;Name=SH03_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13630;old_locus_tag=SH03_13635 NZ_CP010441.1 Protein Homology CDS 2738612 2738836 . + 0 ID=cds2654;Parent=gene2723;Dbxref=Genbank:WP_000106474.1;Name=WP_000106474.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000106474.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2738904 2739626 . - . ID=gene2724;Name=SH03_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13635;old_locus_tag=SH03_13640 NZ_CP010441.1 Protein Homology CDS 2738904 2739626 . - 0 ID=cds2655;Parent=gene2724;Dbxref=Genbank:WP_001152715.1;Name=WP_001152715.1;Note=regulates genes involved in cell division;gbkey=CDS;product=regulatory protein SdiA;protein_id=WP_001152715.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2739856 2740608 . - . ID=gene2725;Name=SH03_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13640;old_locus_tag=SH03_13645 NZ_CP010441.1 Protein Homology CDS 2739856 2740608 . - 0 ID=cds2656;Parent=gene2725;Dbxref=Genbank:WP_001272991.1;Name=WP_001272991.1;gbkey=CDS;product=ABC transporter ATPase;protein_id=WP_001272991.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2740605 2741273 . - . ID=gene2726;Name=SH03_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13645;old_locus_tag=SH03_13650 NZ_CP010441.1 Protein Homology CDS 2740605 2741273 . - 0 ID=cds2657;Parent=gene2726;Dbxref=Genbank:WP_001158220.1;Name=WP_001158220.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_001158220.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2741288 2742274 . - . ID=gene2727;Name=SH03_RS13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13650;old_locus_tag=SH03_13655 NZ_CP010441.1 Protein Homology CDS 2741288 2742274 . - 0 ID=cds2658;Parent=gene2727;Dbxref=Genbank:WP_001128215.1;Name=WP_001128215.1;Note=catalyzes the formation of pyruvate from D-cysteine;gbkey=CDS;product=D-cysteine desulfhydrase;protein_id=WP_001128215.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2742379 2743179 . - . ID=gene2728;Name=SH03_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13655;old_locus_tag=SH03_13660 NZ_CP010441.1 Protein Homology CDS 2742379 2743179 . - 0 ID=cds2659;Parent=gene2728;Dbxref=Genbank:WP_001296168.1;Name=WP_001296168.1;gbkey=CDS;product=cystine-binding periplasmic protein;protein_id=WP_001296168.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2743267 2743818 . - . ID=gene2729;Name=SH03_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13660;old_locus_tag=SH03_13665 NZ_CP010441.1 Protein Homology CDS 2743267 2743818 . - 0 ID=cds2660;Parent=gene2729;Dbxref=Genbank:WP_001350518.1;Name=WP_001350518.1;Note=expression activator of the class 2 type of flagellar operons%2C essential to achieve maximal cell motility%3B activator of type 1 fimbrial gene expression%3B cell density-responsive regulator%3B FliZ in Salmonella typhimurium induces HilA%2C an activator of invasion genes necessary to achieve full virulence;gbkey=CDS;product=regulator of sigma S factor FliZ;protein_id=WP_001350518.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2743864 2744583 . - . ID=gene2730;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=SH03_RS13665;old_locus_tag=SH03_13670 NZ_CP010441.1 Protein Homology CDS 2743864 2744583 . - 0 ID=cds2661;Parent=gene2730;Dbxref=Genbank:WP_001087467.1;Name=WP_001087467.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes;gbkey=CDS;gene=fliA;product=RNA polymerase sigma factor FliA;protein_id=WP_001087467.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2744904 2746400 . - . ID=gene2731;Name=SH03_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13670;old_locus_tag=SH03_13675 NZ_CP010441.1 Protein Homology CDS 2744904 2746400 . - 0 ID=cds2662;Parent=gene2731;Dbxref=Genbank:WP_000079739.1;Name=WP_000079739.1;Note=structural flagella protein%3B individual Salmonella serotypes usually alternate between the production of 2 antigenic forms of flagella%2C termed phase 1 and phase 2%2C each specified by separate structural genes;gbkey=CDS;product=flagellin;protein_id=WP_000079739.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2746666 2748072 . + . ID=gene2732;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=SH03_RS13675;old_locus_tag=SH03_13680 NZ_CP010441.1 Protein Homology CDS 2746666 2748072 . + 0 ID=cds2663;Parent=gene2732;Dbxref=Genbank:WP_000146784.1;Name=WP_000146784.1;Note=involved in flagellin assembly;gbkey=CDS;gene=fliD;product=flagellar hook-associated protein 2;protein_id=WP_000146784.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2748097 2748507 . + . ID=gene2733;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=SH03_RS13680;old_locus_tag=SH03_13685 NZ_CP010441.1 Protein Homology CDS 2748097 2748507 . + 0 ID=cds2664;Parent=gene2733;Dbxref=Genbank:WP_000270671.1;Name=WP_000270671.1;Note=flagellin specific chaperone;gbkey=CDS;gene=fliS;product=flagellar protein FliS;protein_id=WP_000270671.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2748507 2748872 . + . ID=gene2734;Name=SH03_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13685;old_locus_tag=SH03_13690 NZ_CP010441.1 Protein Homology CDS 2748507 2748872 . + 0 ID=cds2665;Parent=gene2734;Dbxref=Genbank:WP_001015033.1;Name=WP_001015033.1;Note=binds flagellar cap subunits (FliD) and seems to prevents their oligomerization prior to its translocation through the flagellum-specific type III export pathway%3B acts as a repressor of flagellar class 2 operons by preventing FlhD2C2 to bind the promoter and inhibiting the FlhD2C2-dependent transcription%3B member of the type III cytoplasmic chaperone family;gbkey=CDS;product=flagellar protein FliT;protein_id=WP_001015033.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2748950 2750437 . + . ID=gene2735;Name=SH03_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13690;old_locus_tag=SH03_13695 NZ_CP010441.1 Protein Homology CDS 2748950 2750437 . + 0 ID=cds2666;Parent=gene2735;Dbxref=Genbank:WP_001245695.1;Name=WP_001245695.1;Note=converts 1%2C4-alpha-D-glucans to maltodextrin;gbkey=CDS;product=alpha-amylase;protein_id=WP_001245695.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2750471 2750884 . - . ID=gene2736;Name=SH03_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13695;old_locus_tag=SH03_13700 NZ_CP010441.1 Protein Homology CDS 2750471 2750884 . - 0 ID=cds2667;Parent=gene2736;Dbxref=Genbank:WP_001350519.1;Name=WP_001350519.1;gbkey=CDS;product=lipoprotein;protein_id=WP_001350519.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2751071 2752276 . + . ID=gene2737;Name=SH03_RS13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13700;old_locus_tag=SH03_13705 NZ_CP010441.1 Protein Homology CDS 2751071 2752276 . + 0 ID=cds2668;Parent=gene2737;Dbxref=Genbank:WP_000118897.1;Name=WP_000118897.1;gbkey=CDS;product=UPF0394 family sulfur transport domain-containing inner membrane protein;protein_id=WP_000118897.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2752273 2752506 . + . ID=gene2738;Name=SH03_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13705;old_locus_tag=SH03_13710 NZ_CP010441.1 Protein Homology CDS 2752273 2752506 . + 0 ID=cds2669;Parent=gene2738;Dbxref=Genbank:WP_000790504.1;Name=WP_000790504.1;gbkey=CDS;product=TusA family sulfurtransferase;protein_id=WP_000790504.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2752615 2753283 . + . ID=gene2739;Name=SH03_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13710;old_locus_tag=SH03_13715 NZ_CP010441.1 Protein Homology CDS 2752615 2753283 . + 0 ID=cds2670;Parent=gene2739;Dbxref=Genbank:WP_000334583.1;Name=WP_000334583.1;gbkey=CDS;product=DUF159 domain-containing protein;protein_id=WP_000334583.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2753394 2753873 . + . ID=gene2740;Name=SH03_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13715;old_locus_tag=SH03_13720 NZ_CP010441.1 Protein Homology CDS 2753394 2753873 . + 0 ID=cds2671;Parent=gene2740;Dbxref=Genbank:WP_000494172.1;Name=WP_000494172.1;gbkey=CDS;product=GNAT family acetyltransferase;protein_id=WP_000494172.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2754017 2754246 . - . ID=gene2741;Name=SH03_RS13720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS13720;pseudo=true NZ_CP010441.1 Protein Homology CDS 2754017 2754246 . - 0 ID=cds2672;Parent=gene2741;exception=annotated by transcript or proteomic data;gbkey=CDS;product=non-LEE-encoded type III secreted effector domain protein;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 2754343 2755145 . - . ID=gene2742;Name=SH03_RS13725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS13725;pseudo=true NZ_CP010441.1 Protein Homology CDS 2754343 2755145 . - 0 ID=cds2673;Parent=gene2742;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 2755296 2755574 . + . ID=gene2743;Name=SH03_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13730;old_locus_tag=SH03_13735 NZ_CP010441.1 Protein Homology CDS 2755296 2755574 . + 0 ID=cds2674;Parent=gene2743;Dbxref=Genbank:WP_015675427.1;Name=WP_015675427.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015675427.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2755494 2755808 . - . ID=gene2744;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=SH03_RS13735;old_locus_tag=SH03_13740 NZ_CP010441.1 Protein Homology CDS 2755494 2755808 . - 0 ID=cds2675;Parent=gene2744;Dbxref=Genbank:WP_001274299.1;Name=WP_001274299.1;Note=forms a junction between the M-ring and FlgB during flagella biosynthesis;gbkey=CDS;gene=fliE;product=flagellar hook-basal body complex protein FliE;protein_id=WP_001274299.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2756023 2757681 . + . ID=gene2745;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=SH03_RS13740;old_locus_tag=SH03_13745 NZ_CP010441.1 Protein Homology CDS 2756023 2757681 . + 0 ID=cds2676;Parent=gene2745;Dbxref=Genbank:WP_000994427.1;Name=WP_000994427.1;Note=the MS-ring anchors the flagellum to the cytoplasmic membrane%3B part of the flagellar basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod;gbkey=CDS;gene=fliF;product=flagellar M-ring protein;protein_id=WP_000994427.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2757674 2758669 . + . ID=gene2746;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=SH03_RS13745;old_locus_tag=SH03_13750 NZ_CP010441.1 Protein Homology CDS 2757674 2758669 . + 0 ID=cds2677;Parent=gene2746;Dbxref=Genbank:WP_000067950.1;Name=WP_000067950.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliG;product=flagellar motor switch protein FliG;protein_id=WP_000067950.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2758662 2759348 . + . ID=gene2747;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=SH03_RS13750;old_locus_tag=SH03_13755 NZ_CP010441.1 Protein Homology CDS 2758662 2759348 . + 0 ID=cds2678;Parent=gene2747;Dbxref=Genbank:WP_001282683.1;Name=WP_001282683.1;Note=binds to and inhibits the function of flagella specific ATPase FliI;gbkey=CDS;gene=fliH;product=flagellar assembly protein FliH;protein_id=WP_001282683.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2759348 2760721 . + . ID=gene2748;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=SH03_RS13755;old_locus_tag=SH03_13760 NZ_CP010441.1 Protein Homology CDS 2759348 2760721 . + 0 ID=cds2679;Parent=gene2748;Dbxref=Genbank:WP_000213294.1;Name=WP_000213294.1;Note=involved in type III protein export during flagellum assembly;gbkey=CDS;gene=fliI;product=flagellum-specific ATP synthase;protein_id=WP_000213294.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2760740 2761183 . + . ID=gene2749;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=SH03_RS13760;old_locus_tag=SH03_13765 NZ_CP010441.1 Protein Homology CDS 2760740 2761183 . + 0 ID=cds2680;Parent=gene2749;Dbxref=Genbank:WP_000807579.1;Name=WP_000807579.1;Note=rod/hook and filament chaperone;gbkey=CDS;gene=fliJ;product=flagellar FliJ protein;protein_id=WP_000807579.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2761180 2762307 . + . ID=gene2750;Name=SH03_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13765;old_locus_tag=SH03_13770 NZ_CP010441.1 Protein Homology CDS 2761180 2762307 . + 0 ID=cds2681;Parent=gene2750;Dbxref=Genbank:WP_000620071.1;Name=WP_000620071.1;gbkey=CDS;product=flagellar hook-length control protein;protein_id=WP_000620071.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2762412 2762876 . + . ID=gene2751;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=SH03_RS13770;old_locus_tag=SH03_13775 NZ_CP010441.1 Protein Homology CDS 2762412 2762876 . + 0 ID=cds2682;Parent=gene2751;Dbxref=Genbank:WP_000133106.1;Name=WP_000133106.1;Note=interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring;gbkey=CDS;gene=fliL;product=flagellar protein FliL;protein_id=WP_000133106.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2762881 2763885 . + . ID=gene2752;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=SH03_RS13775;old_locus_tag=SH03_13780 NZ_CP010441.1 Protein Homology CDS 2762881 2763885 . + 0 ID=cds2683;Parent=gene2752;Dbxref=Genbank:WP_001350520.1;Name=WP_001350520.1;Note=with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation;gbkey=CDS;gene=fliM;product=flagellar motor switch protein FliM;protein_id=WP_001350520.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2763882 2764295 . + . ID=gene2753;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=SH03_RS13780;old_locus_tag=SH03_13785 NZ_CP010441.1 Protein Homology CDS 2763882 2764295 . + 0 ID=cds2684;Parent=gene2753;Dbxref=Genbank:WP_001282101.1;Name=WP_001282101.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliN;product=flagellar motor switch protein FliN;protein_id=WP_001282101.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2764298 2764663 . + . ID=gene2754;Name=SH03_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13785;old_locus_tag=SH03_13790 NZ_CP010441.1 Protein Homology CDS 2764298 2764663 . + 0 ID=cds2685;Parent=gene2754;Dbxref=Genbank:WP_001302429.1;Name=WP_001302429.1;Note=with FlhA%2C FlhB%2C FliP%2C FliQ and FliR is one of the membrane components of the flagellar export apparatus;gbkey=CDS;product=flagellar protein FliO;protein_id=WP_001302429.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2764663 2765400 . + . ID=gene2755;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=SH03_RS13790;old_locus_tag=SH03_13795 NZ_CP010441.1 Protein Homology CDS 2764663 2765400 . + 0 ID=cds2686;Parent=gene2755;Dbxref=Genbank:WP_001253441.1;Name=WP_001253441.1;Note=FliP%2C with proteins FliQ and FliR%2C forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliP;product=flagellar biosynthetic protein FliP;protein_id=WP_001253441.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2765410 2765679 . + . ID=gene2756;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=SH03_RS13795;old_locus_tag=SH03_13800 NZ_CP010441.1 Protein Homology CDS 2765410 2765679 . + 0 ID=cds2687;Parent=gene2756;Dbxref=Genbank:WP_000187358.1;Name=WP_000187358.1;Note=with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliQ;product=flagellar biosynthetic protein FliQ;protein_id=WP_000187358.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2765687 2766472 . + . ID=gene2757;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=SH03_RS13800;old_locus_tag=SH03_13805 NZ_CP010441.1 Protein Homology CDS 2765687 2766472 . + 0 ID=cds2688;Parent=gene2757;Dbxref=Genbank:WP_000942319.1;Name=WP_000942319.1;Note=FliR%2C with proteins FliP and FliQ%2C forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliR;product=flagellar biosynthesis protein FliR;protein_id=WP_000942319.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2766762 2767385 . + . ID=gene2758;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=SH03_RS13805;old_locus_tag=SH03_13810 NZ_CP010441.1 Protein Homology CDS 2766762 2767385 . + 0 ID=cds2689;Parent=gene2758;Dbxref=Genbank:WP_000104001.1;Name=WP_000104001.1;Note=with RcsB is a positive regulator of capsular polysaccharide synthesis genes;gbkey=CDS;gene=rcsA;product=transcriptional regulator;protein_id=WP_000104001.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2767429 2767617 . - . ID=gene2759;Name=SH03_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13810;old_locus_tag=SH03_13815 NZ_CP010441.1 Protein Homology CDS 2767429 2767617 . - 0 ID=cds2690;Parent=gene2759;Dbxref=Genbank:WP_000867217.1;Name=WP_000867217.1;gbkey=CDS;product=protein DsrB;protein_id=WP_000867217.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2767780 2768007 . + . ID=gene2760;Name=SH03_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13815;old_locus_tag=SH03_13820 NZ_CP010441.1 Protein Homology CDS 2767780 2768007 . + 0 ID=cds2691;Parent=gene2760;Dbxref=Genbank:WP_000844800.1;Name=WP_000844800.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000844800.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2768305 2769120 . + . ID=gene2761;Name=SH03_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13820;old_locus_tag=SH03_13825 NZ_CP010441.1 Protein Homology CDS 2768305 2769120 . + 0 ID=cds2692;Parent=gene2761;Dbxref=Genbank:WP_000491520.1;Name=WP_000491520.1;Note=catalyzes the hydrolysis of mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate;gbkey=CDS;product=mannosyl-3-phosphoglycerate phosphatase;protein_id=WP_000491520.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2769117 2770793 . - . ID=gene2762;Name=SH03_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13825;old_locus_tag=SH03_13830 NZ_CP010441.1 Protein Homology CDS 2769117 2770793 . - 0 ID=cds2693;Parent=gene2762;Dbxref=Genbank:WP_001369861.1;Name=WP_001369861.1;Note=catalyzes the formation of cyclic di-3'%2C5'-guanylate from guanosine triphosphate%3B involved in the regulation of cellulose biosynthesis;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_001369861.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2770982 2771164 . - . ID=gene2763;Name=SH03_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13830;old_locus_tag=SH03_13835 NZ_CP010441.1 Protein Homology CDS 2770982 2771164 . - 0 ID=cds2694;Parent=gene2763;Dbxref=Genbank:WP_000009307.1;Name=WP_000009307.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000009307.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2771243 2772160 . - . ID=gene2764;Name=SH03_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13835;old_locus_tag=SH03_13840 NZ_CP010441.1 Protein Homology CDS 2771243 2772160 . - 0 ID=cds2695;Parent=gene2764;Dbxref=Genbank:WP_000922686.1;Name=WP_000922686.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000922686.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2772333 2773253 . + . ID=gene2765;Name=SH03_RS13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13840;old_locus_tag=SH03_13845 NZ_CP010441.1 Protein Homology CDS 2772333 2773253 . + 0 ID=cds2696;Parent=gene2765;Dbxref=Genbank:WP_001212226.1;Name=WP_001212226.1;gbkey=CDS;product=amino acid exporter for phenylalanine%2C threonine;protein_id=WP_001212226.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2773242 2773712 . - . ID=gene2766;Name=SH03_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13845;old_locus_tag=SH03_13850 NZ_CP010441.1 Protein Homology CDS 2773242 2773712 . - 0 ID=cds2697;Parent=gene2766;Dbxref=Genbank:WP_000786005.1;Name=WP_000786005.1;Note=DNA mismatch endonuclease%3B recognizes and repairs T:G mismatches;gbkey=CDS;product=very short patch repair protein;protein_id=WP_000786005.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2773693 2775111 . - . ID=gene2767;Name=SH03_RS13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13850;old_locus_tag=SH03_13855 NZ_CP010441.1 Protein Homology CDS 2773693 2775111 . - 0 ID=cds2698;Parent=gene2767;Dbxref=Genbank:WP_001157239.1;Name=WP_001157239.1;gbkey=CDS;product=DNA-cytosine methyltransferase;protein_id=WP_001157239.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2775178 2775873 . - . ID=gene2768;Name=SH03_RS13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13855;old_locus_tag=SH03_13860 NZ_CP010441.1 Protein Homology CDS 2775178 2775873 . - 0 ID=cds2699;Parent=gene2768;Dbxref=Genbank:WP_000365562.1;Name=WP_000365562.1;gbkey=CDS;product=hydrolase;protein_id=WP_000365562.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2775913 2776215 . - . ID=gene2769;Name=SH03_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13860;old_locus_tag=SH03_13865 NZ_CP010441.1 Protein Homology CDS 2775913 2776215 . - 0 ID=cds2700;Parent=gene2769;Dbxref=Genbank:WP_001300283.1;Name=WP_001300283.1;gbkey=CDS;product=permease;protein_id=WP_001300283.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2776845 2778037 . + . ID=gene2770;Name=SH03_RS13870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS13870;pseudo=true NZ_CP010441.1 Protein Homology CDS 2776845 2778037 . + 0 ID=cds2701;Parent=gene2770;Note=allows for ions and hydrophilic solutes to cross the outer membrane;exception=annotated by transcript or proteomic data;gbkey=CDS;product=porin;pseudo=true;transl_except=(pos:2777328..2777330%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq gene 2778038 2778241 . - . ID=gene2771;Name=SH03_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13875;old_locus_tag=SH03_13880 NZ_CP010441.1 Protein Homology CDS 2778038 2778241 . - 0 ID=cds2702;Parent=gene2771;Dbxref=Genbank:WP_000550064.1;Name=WP_000550064.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000550064.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2778629 2779480 . + . ID=gene2772;Name=SH03_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13880;old_locus_tag=SH03_13885 NZ_CP010441.1 Protein Homology CDS 2778629 2779480 . + 0 ID=cds2703;Parent=gene2772;Dbxref=Genbank:WP_000218212.1;Name=WP_000218212.1;Note=Hsp31 stabilizes early unfolding protein intermediates under severe heat stress;gbkey=CDS;product=Molecular chaperone Hsp31 and glyoxalase 3;protein_id=WP_000218212.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2779588 2780946 . - . ID=gene2773;Name=SH03_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13885;old_locus_tag=SH03_13890 NZ_CP010441.1 Protein Homology CDS 2779588 2780946 . - 0 ID=cds2704;Parent=gene2773;Dbxref=Genbank:WP_000826792.1;Name=WP_000826792.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_000826792.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2780946 2781617 . - . ID=gene2774;Name=SH03_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13890;old_locus_tag=SH03_13895 NZ_CP010441.1 Protein Homology CDS 2780946 2781617 . - 0 ID=cds2705;Parent=gene2774;Dbxref=Genbank:WP_001395354.1;Name=WP_001395354.1;Note=induced by CusR in the presence of copper%3B YedW induces the expression of the upstream gene yedV (encoding a sensor kinase) as well as yedW%3B yedVW is one of four copper regulons found in E. coli%3B part of the copper homeostasis mechanism%3B confers resistance to copper and several drugs when induced;gbkey=CDS;product=two-component system response regulator;protein_id=WP_001395354.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2781750 2782163 . + . ID=gene2775;Name=SH03_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13895;old_locus_tag=SH03_13900 NZ_CP010441.1 Protein Homology CDS 2781750 2782163 . + 0 ID=cds2706;Parent=gene2775;Dbxref=Genbank:WP_000920120.1;Name=WP_000920120.1;Note=catalyzes the formation of 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline from 5-hydroxyisourate;gbkey=CDS;product=5-hydroxyisourate hydrolase;protein_id=WP_000920120.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2782272 2783276 . + . ID=gene2776;Name=SH03_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13900;old_locus_tag=SH03_13905 NZ_CP010441.1 Protein Homology CDS 2782272 2783276 . + 0 ID=cds2707;Parent=gene2776;Dbxref=Genbank:WP_000740107.1;Name=WP_000740107.1;Note=in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase%3B requires inner membrane anchor protein YedZ;gbkey=CDS;product=sulfoxide reductase catalytic subunit YedY;protein_id=WP_000740107.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2783277 2783912 . + . ID=gene2777;Name=SH03_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13905;old_locus_tag=SH03_13910 NZ_CP010441.1 Protein Homology CDS 2783277 2783912 . + 0 ID=cds2708;Parent=gene2777;Dbxref=Genbank:WP_001240091.1;Name=WP_001240091.1;Note=in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY%3B sulfite oxidase activity not demonstrated%3B contains heme;gbkey=CDS;product=sulfoxide reductase heme-binding subunit YedZ;protein_id=WP_001240091.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2784169 2784819 . + . ID=gene2778;Name=SH03_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13910;old_locus_tag=SH03_13915 NZ_CP010441.1 Protein Homology CDS 2784169 2784819 . + 0 ID=cds2709;Parent=gene2778;Dbxref=Genbank:WP_001007805.1;Name=WP_001007805.1;gbkey=CDS;product=metal-binding protein ZinT;protein_id=WP_001007805.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2785162 2785692 . + . ID=gene2779;Name=SH03_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13915;old_locus_tag=SH03_13920 NZ_CP010441.1 Protein Homology CDS 2785162 2785692 . + 0 ID=cds2710;Parent=gene2779;Dbxref=Genbank:WP_001079074.1;Name=WP_001079074.1;gbkey=CDS;product=cytochrome b561 homolog 1;protein_id=WP_001079074.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2785715 2785957 . + . ID=gene2780;Name=SH03_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13920;old_locus_tag=SH03_13925 NZ_CP010441.1 Protein Homology CDS 2785715 2785957 . + 0 ID=cds2711;Parent=gene2780;Dbxref=Genbank:WP_032144647.1;Name=WP_032144647.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032144647.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2786262 2786351 . - . ID=gene2781;Name=SH03_RS13925;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS13925;old_locus_tag=SH03_13930 NZ_CP010441.1 tRNAscan-SE tRNA 2786262 2786351 . - . ID=rna69;Parent=gene2781;anticodon=(pos:complement(2786315..2786317));gbkey=tRNA;product=tRNA-Ser NZ_CP010441.1 tRNAscan-SE exon 2786262 2786351 . - . ID=id152;Parent=rna69;anticodon=(pos:complement(2786315..2786317));gbkey=tRNA;product=tRNA-Ser NZ_CP010441.1 RefSeq gene 2786445 2787242 . + . ID=gene2782;Name=SH03_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13930;old_locus_tag=SH03_13935 NZ_CP010441.1 Protein Homology CDS 2786445 2787242 . + 0 ID=cds2712;Parent=gene2782;Dbxref=Genbank:WP_001302302.1;Name=WP_001302302.1;Note=Mlc anti-repressor%3B regulates ptsG by binding and inactivating Mlc;gbkey=CDS;product=protein MtfA;protein_id=WP_001302302.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 2787319 2787423 . + . ID=id153;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 2787343 2787418 . + . ID=gene2783;Name=SH03_RS13935;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS13935;old_locus_tag=SH03_13940 NZ_CP010441.1 tRNAscan-SE tRNA 2787343 2787418 . + . ID=rna70;Parent=gene2783;anticodon=(pos:2787376..2787378);gbkey=tRNA;product=tRNA-Asn NZ_CP010441.1 tRNAscan-SE exon 2787343 2787418 . + . ID=id154;Parent=rna70;anticodon=(pos:2787376..2787378);gbkey=tRNA;product=tRNA-Asn NZ_CP010441.1 RefSeq gene 2787732 2794808 . + . ID=gene2784;Name=SH03_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13940;old_locus_tag=SH03_13945 NZ_CP010441.1 Protein Homology CDS 2787732 2794808 . + 0 ID=cds2713;Parent=gene2784;Dbxref=Genbank:WP_010723107.1;Name=WP_010723107.1;gbkey=CDS;product=adhesin;protein_id=WP_010723107.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2795070 2796122 . - . ID=gene2785;Name=SH03_RS13945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS13945;pseudo=true NZ_CP010441.1 Protein Homology CDS 2795070 2796122 . - 0 ID=cds2714;Parent=gene2785;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(2795418..2795420)%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq gene 2796437 2797753 . + . ID=gene2786;Name=SH03_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13950;old_locus_tag=SH03_13955 NZ_CP010441.1 Protein Homology CDS 2796437 2797753 . + 0 ID=cds2715;Parent=gene2786;Dbxref=Genbank:WP_000378575.1;Name=WP_000378575.1;gbkey=CDS;product=shikimate transporter;protein_id=WP_000378575.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2797855 2799309 . + . ID=gene2787;Name=SH03_RS13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13955;old_locus_tag=SH03_13960 NZ_CP010441.1 Protein Homology CDS 2797855 2799309 . + 0 ID=cds2716;Parent=gene2787;Dbxref=Genbank:WP_001060244.1;Name=WP_001060244.1;Note=Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile;gbkey=CDS;product=AMP nucleosidase;protein_id=WP_001060244.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2799652 2800368 . + . ID=gene2788;Name=SH03_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13960;old_locus_tag=SH03_13965 NZ_CP010441.1 Protein Homology CDS 2799652 2800368 . + 0 ID=cds2717;Parent=gene2788;Dbxref=Genbank:WP_000532923.1;Name=WP_000532923.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000532923.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 2800817 2800920 . + . ID=id155;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 2800821 2800896 . - . ID=gene2789;Name=SH03_RS13965;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS13965;old_locus_tag=SH03_13970 NZ_CP010441.1 tRNAscan-SE tRNA 2800821 2800896 . - . ID=rna71;Parent=gene2789;anticodon=(pos:complement(2800861..2800863));gbkey=tRNA;product=tRNA-Asn NZ_CP010441.1 tRNAscan-SE exon 2800821 2800896 . - . ID=id156;Parent=rna71;anticodon=(pos:complement(2800861..2800863));gbkey=tRNA;product=tRNA-Asn NZ_CP010441.1 RefSeq gene 2800997 2802451 . - . ID=gene2790;Name=SH03_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13970;old_locus_tag=SH03_13975 NZ_CP010441.1 Protein Homology CDS 2800997 2802451 . - 0 ID=cds2718;Parent=gene2790;Dbxref=Genbank:WP_001314846.1;Name=WP_001314846.1;gbkey=CDS;product=MATE family multidrug exporter;protein_id=WP_001314846.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2802645 2802720 . + . ID=gene2791;Name=SH03_RS13975;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS13975;old_locus_tag=SH03_13980 NZ_CP010441.1 tRNAscan-SE tRNA 2802645 2802720 . + . ID=rna72;Parent=gene2791;anticodon=(pos:2802678..2802680);gbkey=tRNA;product=tRNA-Asn NZ_CP010441.1 tRNAscan-SE exon 2802645 2802720 . + . ID=id157;Parent=rna72;anticodon=(pos:2802678..2802680);gbkey=tRNA;product=tRNA-Asn NZ_CP010441.1 RefSeq gene 2802758 2803708 . - . ID=gene2792;Name=cbl;gbkey=Gene;gene=cbl;gene_biotype=protein_coding;locus_tag=SH03_RS13980;old_locus_tag=SH03_13985 NZ_CP010441.1 Protein Homology CDS 2802758 2803708 . - 0 ID=cds2719;Parent=gene2792;Dbxref=Genbank:WP_001011008.1;Name=WP_001011008.1;Note=LysR-type transcriptional regulator similar to CysB%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates two operons consisting of ABC transporters that are part of the cys regulon%3B regulated by CysB%3B DNA-binding transcriptional activator for the ssuEADCB and tauABCD operons;gbkey=CDS;gene=cbl;product=transcriptional regulator;protein_id=WP_001011008.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2803810 2804727 . - . ID=gene2793;Name=SH03_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13985;old_locus_tag=SH03_13990 NZ_CP010441.1 Protein Homology CDS 2803810 2804727 . - 0 ID=cds2720;Parent=gene2793;Dbxref=Genbank:WP_001011462.1;Name=WP_001011462.1;Note=Transcriptional activator for the hut%2C put and ure operons and repressor for the gdh and gltB operons in response to nitrogen limitation;gbkey=CDS;product=nitrogen assimilation regulatory protein nac;protein_id=WP_001011462.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 2805030 2805134 . + . ID=id158;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 2805054 2805129 . + . ID=gene2794;Name=SH03_RS13990;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS13990;old_locus_tag=SH03_13995 NZ_CP010441.1 tRNAscan-SE tRNA 2805054 2805129 . + . ID=rna73;Parent=gene2794;anticodon=(pos:2805087..2805089);gbkey=tRNA;product=tRNA-Asn NZ_CP010441.1 tRNAscan-SE exon 2805054 2805129 . + . ID=id159;Parent=rna73;anticodon=(pos:2805087..2805089);gbkey=tRNA;product=tRNA-Asn NZ_CP010441.1 RefSeq gene 2805185 2806117 . - . ID=gene2795;Name=SH03_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS13995;old_locus_tag=SH03_14000 NZ_CP010441.1 Protein Homology CDS 2805185 2806117 . - 0 ID=cds2721;Parent=gene2795;Dbxref=Genbank:WP_001350523.1;Name=WP_001350523.1;Note=catalyzes th removal of D-alanine and attachment of the murein lipoprotein to the peptidoglycan tetrapeptide chain;gbkey=CDS;product=transpeptidase;protein_id=WP_001350523.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2806182 2807261 . - . ID=gene2796;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=SH03_RS14000;old_locus_tag=SH03_14005 NZ_CP010441.1 Protein Homology CDS 2806182 2807261 . - 0 ID=cds2722;Parent=gene2796;Dbxref=Genbank:WP_001166160.1;Name=WP_001166160.1;Note=catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5%2C6-dimethylbenzimidazole;gbkey=CDS;gene=cobT;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_001166160.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2807273 2808016 . - . ID=gene2797;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=SH03_RS14005;old_locus_tag=SH03_14010 NZ_CP010441.1 Protein Homology CDS 2807273 2808016 . - 0 ID=cds2723;Parent=gene2797;Dbxref=Genbank:WP_001326708.1;Name=WP_001326708.1;Note=catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole;gbkey=CDS;gene=cobS;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_001326708.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2808013 2808558 . - . ID=gene2798;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=SH03_RS14010;old_locus_tag=SH03_14015 NZ_CP010441.1 Protein Homology CDS 2808013 2808558 . - 0 ID=cds2724;Parent=gene2798;Dbxref=Genbank:WP_000973176.1;Name=WP_000973176.1;Note=catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP;gbkey=CDS;gene=cobU;product=cobalamin biosynthesis protein CobU;protein_id=WP_000973176.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 2808949 2810151 . + . ID=id160;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 2809099 2810079 . - . ID=gene2799;Name=SH03_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14020;old_locus_tag=SH03_14025 NZ_CP010441.1 Protein Homology CDS 2809099 2810079 . - 0 ID=cds2725;Parent=gene2799;Dbxref=Genbank:WP_000019402.1;Name=WP_000019402.1;gbkey=CDS;product=transposase;protein_id=WP_000019402.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2810222 2810386 . - . ID=gene2800;Name=SH03_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14025;old_locus_tag=SH03_14030 NZ_CP010441.1 Protein Homology CDS 2810222 2810386 . - 0 ID=cds2726;Parent=gene2800;Dbxref=Genbank:WP_001128468.1;Name=WP_001128468.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001128468.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 2811734 2813067 . + . ID=id161;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 2811746 2812651 . - . ID=gene2801;Name=SH03_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14030;old_locus_tag=SH03_14035 NZ_CP010441.1 Protein Homology CDS 2811746 2812651 . - 0 ID=cds2727;Parent=gene2801;Dbxref=Genbank:WP_000376502.1;Name=WP_000376502.1;gbkey=CDS;product=integrase;protein_id=WP_000376502.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2812609 2812974 . - . ID=gene2802;Name=SH03_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14035;old_locus_tag=SH03_14040 NZ_CP010441.1 Protein Homology CDS 2812609 2812974 . - 0 ID=cds2728;Parent=gene2802;Dbxref=Genbank:WP_000567766.1;Name=WP_000567766.1;Note=represses IS2 gene transcription;gbkey=CDS;product=transposase;protein_id=WP_000567766.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2813038 2813298 . + . ID=gene2803;Name=SH03_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14040;old_locus_tag=SH03_14045 NZ_CP010441.1 Protein Homology CDS 2813038 2813298 . + 0 ID=cds2729;Parent=gene2803;Dbxref=Genbank:WP_011443594.1;Name=WP_011443594.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_011443594.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2813295 2814005 . + . ID=gene2804;Name=SH03_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14045;old_locus_tag=SH03_14050 NZ_CP010441.1 Protein Homology CDS 2813295 2814005 . + 0 ID=cds2730;Parent=gene2804;Dbxref=Genbank:WP_014639038.1;Name=WP_014639038.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_014639038.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2814333 2817452 . + . ID=gene2805;Name=SH03_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14050;old_locus_tag=SH03_14055 NZ_CP010441.1 Protein Homology CDS 2814333 2817452 . + 0 ID=cds2731;Parent=gene2805;Dbxref=Genbank:WP_000820410.1;Name=WP_000820410.1;gbkey=CDS;product=antigen 43;protein_id=WP_000820410.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2817573 2819134 . + . ID=gene2806;Name=SH03_RS14055;end_range=2819134,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS14055;partial=true;pseudo=true NZ_CP010441.1 Protein Homology CDS 2817573 2819134 . + 0 ID=cds2732;Parent=gene2806;end_range=2819134,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 2819102 2819548 . + . ID=gene2807;Name=SH03_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14060;old_locus_tag=SH03_14065 NZ_CP010441.1 Protein Homology CDS 2819102 2819548 . + 0 ID=cds2733;Parent=gene2807;Dbxref=Genbank:WP_000187523.1;Name=WP_000187523.1;gbkey=CDS;product=UPF0758 protein YeeS;protein_id=WP_000187523.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2819611 2819832 . + . ID=gene2808;Name=SH03_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14065;old_locus_tag=SH03_14070 NZ_CP010441.1 Protein Homology CDS 2819611 2819832 . + 0 ID=cds2734;Parent=gene2808;Dbxref=Genbank:WP_000692323.1;Name=WP_000692323.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000692323.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2819906 2820274 . + . ID=gene2809;Name=SH03_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14070;old_locus_tag=SH03_14075 NZ_CP010441.1 Protein Homology CDS 2819906 2820274 . + 0 ID=cds2735;Parent=gene2809;Dbxref=Genbank:WP_001285584.1;Name=WP_001285584.1;gbkey=CDS;product=cytoskeleton bundling-enhancing protein CbeA;protein_id=WP_001285584.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2820363 2820737 . + . ID=gene2810;Name=SH03_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14075;old_locus_tag=SH03_14080 NZ_CP010441.1 Protein Homology CDS 2820363 2820737 . + 0 ID=cds2736;Parent=gene2810;Dbxref=Genbank:WP_000854814.1;Name=WP_000854814.1;gbkey=CDS;product=toxin CbtA;protein_id=WP_000854814.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2820734 2820928 . + . ID=gene2811;Name=SH03_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14080;old_locus_tag=SH03_14085 NZ_CP010441.1 Protein Homology CDS 2820734 2820928 . + 0 ID=cds2737;Parent=gene2811;Dbxref=Genbank:WP_000988600.1;Name=WP_000988600.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000988600.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2820941 2821054 . + . ID=gene2812;Name=SH03_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14085;old_locus_tag=SH03_14090 NZ_CP010441.1 Protein Homology CDS 2820941 2821054 . + 0 ID=cds2738;Parent=gene2812;Dbxref=Genbank:WP_001161660.1;Name=WP_001161660.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001161660.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2821543 2821725 . + . ID=gene2813;Name=SH03_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14090;old_locus_tag=SH03_14095 NZ_CP010441.1 Protein Homology CDS 2821543 2821725 . + 0 ID=cds2739;Parent=gene2813;Dbxref=Genbank:WP_001016348.1;Name=WP_001016348.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001016348.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2821826 2822155 . - . ID=gene2814;Name=SH03_RS14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14095;old_locus_tag=SH03_14100 NZ_CP010441.1 Protein Homology CDS 2821826 2822155 . - 0 ID=cds2740;Parent=gene2814;Dbxref=Genbank:WP_000450409.1;Name=WP_000450409.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000450409.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2822327 2823385 . - . ID=gene2815;Name=SH03_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14100;old_locus_tag=SH03_14105 NZ_CP010441.1 Protein Homology CDS 2822327 2823385 . - 0 ID=cds2741;Parent=gene2815;Dbxref=Genbank:WP_001200891.1;Name=WP_001200891.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001200891.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2823583 2824056 . - . ID=gene2816;Name=SH03_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14105;old_locus_tag=SH03_14110 NZ_CP010441.1 Protein Homology CDS 2823583 2824056 . - 0 ID=cds2742;Parent=gene2816;Dbxref=Genbank:WP_001105415.1;Name=WP_001105415.1;gbkey=CDS;product=DNA gyrase inhibitor;protein_id=WP_001105415.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2824175 2825341 . - . ID=gene2817;Name=SH03_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14110;old_locus_tag=SH03_14115 NZ_CP010441.1 Protein Homology CDS 2824175 2825341 . - 0 ID=cds2743;Parent=gene2817;Dbxref=Genbank:WP_000830156.1;Name=WP_000830156.1;Note=removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors%3B penicillin-binding protein 6B%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_000830156.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2825553 2826977 . + . ID=gene2818;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=SH03_RS14115;old_locus_tag=SH03_14120 NZ_CP010441.1 Protein Homology CDS 2825553 2826977 . + 0 ID=cds2744;Parent=gene2818;Dbxref=Genbank:WP_001393574.1;Name=WP_001393574.1;Note=Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates;gbkey=CDS;gene=sbcB;product=exonuclease I;protein_id=WP_001393574.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2827020 2827247 . - . ID=gene2819;Name=SH03_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14120;old_locus_tag=SH03_14125 NZ_CP010441.1 Protein Homology CDS 2827020 2827247 . - 0 ID=cds2745;Parent=gene2819;Dbxref=Genbank:WP_000234896.1;Name=WP_000234896.1;gbkey=CDS;product=TusA family sulfurtransferase;protein_id=WP_000234896.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2827261 2828319 . - . ID=gene2820;Name=SH03_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14125;old_locus_tag=SH03_14130 NZ_CP010441.1 Protein Homology CDS 2827261 2828319 . - 0 ID=cds2746;Parent=gene2820;Dbxref=Genbank:WP_000492339.1;Name=WP_000492339.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000492339.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2828498 2829856 . - . ID=gene2821;Name=SH03_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14130;old_locus_tag=SH03_14135 NZ_CP010441.1 Protein Homology CDS 2828498 2829856 . - 0 ID=cds2747;Parent=gene2821;Dbxref=Genbank:WP_000019197.1;Name=WP_000019197.1;gbkey=CDS;product=low-affinity putrescine importer PlaP;protein_id=WP_000019197.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2830123 2831052 . - . ID=gene2822;Name=SH03_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14135;old_locus_tag=SH03_14140 NZ_CP010441.1 Protein Homology CDS 2830123 2831052 . - 0 ID=cds2748;Parent=gene2822;Dbxref=Genbank:WP_000803351.1;Name=WP_000803351.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_000803351.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2831098 2831922 . - . ID=gene2823;Name=SH03_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14140;old_locus_tag=SH03_14145 NZ_CP010441.1 Protein Homology CDS 2831098 2831922 . - 0 ID=cds2749;Parent=gene2823;Dbxref=Genbank:WP_000754737.1;Name=WP_000754737.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000754737.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2832005 2832259 . - . ID=gene2824;Name=SH03_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14145;old_locus_tag=SH03_14150 NZ_CP010441.1 Protein Homology CDS 2832005 2832259 . - 0 ID=cds2750;Parent=gene2824;Dbxref=Genbank:WP_000767829.1;Name=WP_000767829.1;gbkey=CDS;product=toxin YoeB;protein_id=WP_000767829.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2832256 2832507 . - . ID=gene2825;Name=SH03_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14150;old_locus_tag=SH03_14155 NZ_CP010441.1 Protein Homology CDS 2832256 2832507 . - 0 ID=cds2751;Parent=gene2825;Dbxref=Genbank:WP_001259255.1;Name=WP_001259255.1;Note=Antitoxin that counteracts the effect of the YoeB toxin;gbkey=CDS;product=antitoxin YefM;protein_id=WP_001259255.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2832986 2833849 . + . ID=gene2826;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=SH03_RS14155;old_locus_tag=SH03_14160 NZ_CP010441.1 Protein Homology CDS 2832986 2833849 . + 0 ID=cds2752;Parent=gene2826;Dbxref=Genbank:WP_038432600.1;Name=WP_038432600.1;Note=long form of enzyme%3B catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors;gbkey=CDS;gene=hisG;product=ATP phosphoribosyltransferase;protein_id=WP_038432600.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2833855 2835159 . + . ID=gene2827;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=SH03_RS14160;old_locus_tag=SH03_14165 NZ_CP010441.1 Protein Homology CDS 2833855 2835159 . + 0 ID=cds2753;Parent=gene2827;Dbxref=Genbank:WP_000009594.1;Name=WP_000009594.1;Note=catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis%3B functions as a dimer;gbkey=CDS;gene=hisD;product=histidinol dehydrogenase;protein_id=WP_000009594.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2835156 2836226 . + . ID=gene2828;Name=SH03_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14165;old_locus_tag=SH03_14170 NZ_CP010441.1 Protein Homology CDS 2835156 2836226 . + 0 ID=cds2754;Parent=gene2828;Dbxref=Genbank:WP_000108941.1;Name=WP_000108941.1;Note=catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis;gbkey=CDS;product=histidinol-phosphate aminotransferase;protein_id=WP_000108941.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2836226 2837293 . + . ID=gene2829;Name=SH03_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14170;old_locus_tag=SH03_14175 NZ_CP010441.1 Protein Homology CDS 2836226 2837293 . + 0 ID=cds2755;Parent=gene2829;Dbxref=Genbank:WP_000080105.1;Name=WP_000080105.1;Note=catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate;gbkey=CDS;product=histidine biosynthesis bifunctional protein HisB;protein_id=WP_000080105.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2837293 2837883 . + . ID=gene2830;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=SH03_RS14175;old_locus_tag=SH03_14180 NZ_CP010441.1 Protein Homology CDS 2837293 2837883 . + 0 ID=cds2756;Parent=gene2830;Dbxref=Genbank:WP_001103560.1;Name=WP_001103560.1;Note=with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamide ribonucleotide%2C and glutamate in histidine biosynthesis%3B the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide;gbkey=CDS;gene=hisH;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_001103560.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2837883 2838620 . + . ID=gene2831;Name=SH03_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14180;old_locus_tag=SH03_14185 NZ_CP010441.1 Protein Homology CDS 2837883 2838620 . + 0 ID=cds2757;Parent=gene2831;Dbxref=Genbank:WP_000586462.1;Name=WP_000586462.1;gbkey=CDS;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase;protein_id=WP_000586462.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2838602 2839378 . + . ID=gene2832;Name=SH03_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14185;old_locus_tag=SH03_14190 NZ_CP010441.1 Protein Homology CDS 2838602 2839378 . + 0 ID=cds2758;Parent=gene2832;Dbxref=Genbank:WP_000880182.1;Name=WP_000880182.1;gbkey=CDS;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_000880182.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2839372 2839983 . + . ID=gene2833;Name=SH03_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14190;old_locus_tag=SH03_14195 NZ_CP010441.1 Protein Homology CDS 2839372 2839983 . + 0 ID=cds2759;Parent=gene2833;Dbxref=Genbank:WP_000954911.1;Name=WP_000954911.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis;gbkey=CDS;product=histidine biosynthesis bifunctional protein HisIE;protein_id=WP_000954911.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2840079 2841059 . - . ID=gene2834;Name=SH03_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14195;old_locus_tag=SH03_14200 NZ_CP010441.1 Protein Homology CDS 2840079 2841059 . - 0 ID=cds2760;Parent=gene2834;Dbxref=Genbank:WP_001393575.1;Name=WP_001393575.1;Note=regulator of length of O-antigen component of lipopolysaccharide chains;gbkey=CDS;product=chain length determinant protein;protein_id=WP_001393575.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2841205 2842371 . - . ID=gene2835;Name=SH03_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14200;old_locus_tag=SH03_14205 NZ_CP010441.1 Protein Homology CDS 2841205 2842371 . - 0 ID=cds2761;Parent=gene2835;Dbxref=Genbank:WP_038432605.1;Name=WP_038432605.1;Note=catalyzes the formation of UDP-glucuronate from UDP-glucose;gbkey=CDS;product=UDP-glucose 6-dehydrogenase;protein_id=WP_038432605.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2842620 2844026 . - . ID=gene2836;Name=SH03_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14205;old_locus_tag=SH03_14210 NZ_CP010441.1 Protein Homology CDS 2842620 2844026 . - 0 ID=cds2762;Parent=gene2836;Dbxref=Genbank:WP_000043484.1;Name=WP_000043484.1;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;gbkey=CDS;product=6-phosphogluconate dehydrogenase decarboxylating;protein_id=WP_000043484.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 2844504 2845706 . + . ID=id162;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 2844653 2845633 . - . ID=gene2837;Name=SH03_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14210;old_locus_tag=SH03_14215 NZ_CP010441.1 Protein Homology CDS 2844653 2845633 . - 0 ID=cds2763;Parent=gene2837;Dbxref=Genbank:WP_000019403.1;Name=WP_000019403.1;gbkey=CDS;product=transposase;protein_id=WP_000019403.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2845698 2846147 . - . ID=gene2838;Name=SH03_RS14215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS14215;partial=true;pseudo=true;start_range=.,2845698 NZ_CP010441.1 Protein Homology CDS 2845698 2846147 . - 0 ID=cds2764;Parent=gene2838;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=rhamnosyltransferase;pseudo=true;start_range=.,2845698;transl_table=11 NZ_CP010441.1 RefSeq gene 2846149 2847267 . - . ID=gene2839;Name=SH03_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14220;old_locus_tag=SH03_14225 NZ_CP010441.1 Protein Homology CDS 2846149 2847267 . - 0 ID=cds2765;Parent=gene2839;Dbxref=Genbank:WP_000520320.1;Name=WP_000520320.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_000520320.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2847252 2847842 . - . ID=gene2840;Name=SH03_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14225;old_locus_tag=SH03_14230 NZ_CP010441.1 Protein Homology CDS 2847252 2847842 . - 0 ID=cds2766;Parent=gene2840;Dbxref=Genbank:WP_000601187.1;Name=WP_000601187.1;Note=WbbJ%3B catalyzes the transfer of the O-acetyl moiety to the O antigen%3B part of the lipopolysaccharide biosynthetic pathway;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_000601187.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2847823 2848815 . - . ID=gene2841;Name=SH03_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14230;old_locus_tag=SH03_14235 NZ_CP010441.1 Protein Homology CDS 2847823 2848815 . - 0 ID=cds2767;Parent=gene2841;Dbxref=Genbank:WP_001407542.1;Name=WP_001407542.1;gbkey=CDS;product=beta-1%2C6-galactofuranosyltransferase WbbI;protein_id=WP_001407542.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2848818 2849984 . - . ID=gene2842;Name=SH03_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14235;old_locus_tag=SH03_14240 NZ_CP010441.1 Protein Homology CDS 2848818 2849984 . - 0 ID=cds2768;Parent=gene2842;Dbxref=Genbank:WP_000639866.1;Name=WP_000639866.1;gbkey=CDS;product=O-antigen polymerase;protein_id=WP_000639866.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2849984 2851087 . - . ID=gene2843;Name=SH03_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14240;old_locus_tag=SH03_14245 NZ_CP010441.1 Protein Homology CDS 2849984 2851087 . - 0 ID=cds2769;Parent=gene2843;Dbxref=Genbank:WP_000272486.1;Name=WP_000272486.1;gbkey=CDS;product=UDP-galactopyranose mutase;protein_id=WP_000272486.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2851095 2852342 . - . ID=gene2844;Name=SH03_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14245;old_locus_tag=SH03_14250 NZ_CP010441.1 Protein Homology CDS 2851095 2852342 . - 0 ID=cds2770;Parent=gene2844;Dbxref=Genbank:WP_001393538.1;Name=WP_001393538.1;gbkey=CDS;product=polisoprenol-linked O-antigen transporter;protein_id=WP_001393538.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2852339 2852896 . - . ID=gene2845;Name=SH03_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14250;old_locus_tag=SH03_14255 NZ_CP010441.1 Protein Homology CDS 2852339 2852896 . - 0 ID=cds2771;Parent=gene2845;Dbxref=Genbank:WP_001100981.1;Name=WP_001100981.1;gbkey=CDS;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_001100981.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2852896 2853777 . - . ID=gene2846;Name=SH03_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14255;old_locus_tag=SH03_14260 NZ_CP010441.1 Protein Homology CDS 2852896 2853777 . - 0 ID=cds2772;Parent=gene2846;Dbxref=Genbank:WP_000783975.1;Name=WP_000783975.1;gbkey=CDS;product=glucose-1-phosphate thymidylyltransferase;protein_id=WP_000783975.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2853835 2854733 . - . ID=gene2847;Name=SH03_RS14260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS14260;pseudo=true NZ_CP010441.1 Protein Homology CDS 2853835 2854733 . - 0 ID=cds2773;Parent=gene2847;Note=with dTDP-4-dehydrorhamnose 3%2C5-epimerase forms a complex known as dTDP-L-rhamnose synthetase%3B catalyzes the reduction of dTDP-4-dehydro-6-deoxy-L-mannose to dTDP-L-rhamnose;exception=annotated by transcript or proteomic data;gbkey=CDS;product=dTDP-4-dehydrorhamnose reductase;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 2854733 2855818 . - . ID=gene2848;Name=SH03_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14265;old_locus_tag=SH03_14270 NZ_CP010441.1 Protein Homology CDS 2854733 2855818 . - 0 ID=cds2774;Parent=gene2848;Dbxref=Genbank:WP_000699460.1;Name=WP_000699460.1;gbkey=CDS;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_000699460.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2856191 2857084 . - . ID=gene2849;Name=SH03_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14270;old_locus_tag=SH03_14275 NZ_CP010441.1 Protein Homology CDS 2856191 2857084 . - 0 ID=cds2775;Parent=gene2849;Dbxref=Genbank:WP_000183060.1;Name=WP_000183060.1;gbkey=CDS;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_000183060.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2857259 2858653 . - . ID=gene2850;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=SH03_RS14275;old_locus_tag=SH03_14280 NZ_CP010441.1 Protein Homology CDS 2857259 2858653 . - 0 ID=cds2776;Parent=gene2850;Dbxref=Genbank:WP_001116026.1;Name=WP_001116026.1;Note=WcaM from Salmonella enterica is essential for biofilm formation on HEp-2 cells and chicken intestinal tissue but not on a plastic surface%3B may be involved in the biosynthesis of colanic acid;gbkey=CDS;gene=wcaM;product=colanic acid biosynthesis protein WcaM;protein_id=WP_001116026.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2858664 2859884 . - . ID=gene2851;Name=SH03_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14280;old_locus_tag=SH03_14285 NZ_CP010441.1 Protein Homology CDS 2858664 2859884 . - 0 ID=cds2777;Parent=gene2851;Dbxref=Genbank:WP_000862592.1;Name=WP_000862592.1;gbkey=CDS;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_000862592.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2859881 2861161 . - . ID=gene2852;Name=SH03_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14285;old_locus_tag=SH03_14290 NZ_CP010441.1 Protein Homology CDS 2859881 2861161 . - 0 ID=cds2778;Parent=gene2852;Dbxref=Genbank:WP_000770780.1;Name=WP_000770780.1;gbkey=CDS;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_000770780.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2861437 2862915 . - . ID=gene2853;Name=SH03_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14290;old_locus_tag=SH03_14295 NZ_CP010441.1 Protein Homology CDS 2861437 2862915 . - 0 ID=cds2779;Parent=gene2853;Dbxref=Genbank:WP_000058424.1;Name=WP_000058424.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_000058424.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2862917 2864311 . - . ID=gene2854;Name=SH03_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14295;old_locus_tag=SH03_14300 NZ_CP010441.1 Protein Homology CDS 2862917 2864311 . - 0 ID=cds2780;Parent=gene2854;Dbxref=Genbank:WP_000183107.1;Name=WP_000183107.1;Note=WcaJ%3B glucose-1-phosphate transferase responsible for the addition of the first glucose-1-phosphate from UDP-glucose to the lipid carrier undecaprenyl phosphate in the biosynthesis of colanic acid;gbkey=CDS;product=UDP-glucose--undecaprenyl-phosphate glucose-1-phosphate transferase;protein_id=WP_000183107.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2864366 2865736 . - . ID=gene2855;Name=SH03_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14300;old_locus_tag=SH03_14305 NZ_CP010441.1 Protein Homology CDS 2864366 2865736 . - 0 ID=cds2781;Parent=gene2855;Dbxref=Genbank:WP_001350528.1;Name=WP_001350528.1;Note=capsular polysaccharide biosynthesis protein%3B catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate;gbkey=CDS;product=phosphomannomutase;protein_id=WP_001350528.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2865841 2867277 . - . ID=gene2856;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=SH03_RS14305;old_locus_tag=SH03_14310 NZ_CP010441.1 Protein Homology CDS 2865841 2867277 . - 0 ID=cds2782;Parent=gene2856;Dbxref=Genbank:WP_000079274.1;Name=WP_000079274.1;Note=capsular polysaccharide colanic acid biosynthesis protein%3B catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate;gbkey=CDS;gene=cpsB;product=mannose-1-phosphate guanylyltransferase;protein_id=WP_000079274.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2867280 2868503 . - . ID=gene2857;Name=SH03_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14310;old_locus_tag=SH03_14315 NZ_CP010441.1 Protein Homology CDS 2867280 2868503 . - 0 ID=cds2783;Parent=gene2857;Dbxref=Genbank:WP_000699693.1;Name=WP_000699693.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_000699693.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2868500 2868979 . - . ID=gene2858;Name=SH03_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14315;old_locus_tag=SH03_14320 NZ_CP010441.1 Protein Homology CDS 2868500 2868979 . - 0 ID=cds2784;Parent=gene2858;Dbxref=Genbank:WP_001393539.1;Name=WP_001393539.1;Note=catalyzes the formation of GDP and D-mannose from GDP-D-mannose%3B also hydrolyzes GDP-glucose;gbkey=CDS;product=GDP-mannose mannosyl hydrolase;protein_id=WP_001393539.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2868982 2869947 . - . ID=gene2859;Name=SH03_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14320;old_locus_tag=SH03_14325 NZ_CP010441.1 Protein Homology CDS 2868982 2869947 . - 0 ID=cds2785;Parent=gene2859;Dbxref=Genbank:WP_000043654.1;Name=WP_000043654.1;Note=bifunctional GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase%3Bcatalyzes the formation of GDP-fucose from GDP-4-dehydro-6-deoxy-D-mannose;gbkey=CDS;product=GDP-L-fucose synthase;protein_id=WP_000043654.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2869950 2871071 . - . ID=gene2860;Name=SH03_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14325;old_locus_tag=SH03_14330 NZ_CP010441.1 Protein Homology CDS 2869950 2871071 . - 0 ID=cds2786;Parent=gene2860;Dbxref=Genbank:WP_000048190.1;Name=WP_000048190.1;Note=catalyzes the formation of GDP-4-dehydro-6-deoxy-D-mannose from GDP mannose;gbkey=CDS;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_000048190.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2871097 2871645 . - . ID=gene2861;Name=SH03_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14330;old_locus_tag=SH03_14335 NZ_CP010441.1 Protein Homology CDS 2871097 2871645 . - 0 ID=cds2787;Parent=gene2861;Dbxref=Genbank:WP_001153547.1;Name=WP_001153547.1;gbkey=CDS;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_001153547.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2871661 2872407 . - . ID=gene2862;Name=SH03_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14335;old_locus_tag=SH03_14340 NZ_CP010441.1 Protein Homology CDS 2871661 2872407 . - 0 ID=cds2788;Parent=gene2862;Dbxref=Genbank:WP_000927089.1;Name=WP_000927089.1;gbkey=CDS;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_000927089.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2872418 2873635 . - . ID=gene2863;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=SH03_RS14340;old_locus_tag=SH03_14345 NZ_CP010441.1 Protein Homology CDS 2872418 2873635 . - 0 ID=cds2789;Parent=gene2863;Dbxref=Genbank:WP_000107816.1;Name=WP_000107816.1;Note=essential for colanic acid biosynthesis%3B colanic acid is an exopolysaccharide produced under stress conditions that confers acid and heat tolerance;gbkey=CDS;gene=wcaD;product=colanic acid polymerase;protein_id=WP_000107816.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2873610 2874827 . - . ID=gene2864;Name=SH03_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14345;old_locus_tag=SH03_14350 NZ_CP010441.1 Protein Homology CDS 2873610 2874827 . - 0 ID=cds2790;Parent=gene2864;Dbxref=Genbank:WP_001023871.1;Name=WP_001023871.1;gbkey=CDS;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_001023871.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2874824 2875312 . - . ID=gene2865;Name=SH03_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14350;old_locus_tag=SH03_14355 NZ_CP010441.1 Protein Homology CDS 2874824 2875312 . - 0 ID=cds2791;Parent=gene2865;Dbxref=Genbank:WP_000888740.1;Name=WP_000888740.1;Note=acetyltransferase believed to catalyze the addition of the acetyl group that is attached through an O linkage to the first fucosyl residue of the colanic acid repetitive unit (E unit)%3B wcaB is induced in sessile bacteria and by osmotic shock%2C and repressed when grown in rich medium;gbkey=CDS;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WP_000888740.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2875315 2876154 . - . ID=gene2866;Name=SH03_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14355;old_locus_tag=SH03_14360 NZ_CP010441.1 Protein Homology CDS 2875315 2876154 . - 0 ID=cds2792;Parent=gene2866;Dbxref=Genbank:WP_000794699.1;Name=WP_000794699.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_000794699.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2876247 2878409 . - . ID=gene2867;Name=SH03_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14360;old_locus_tag=SH03_14365 NZ_CP010441.1 Protein Homology CDS 2876247 2878409 . - 0 ID=cds2793;Parent=gene2867;Dbxref=Genbank:WP_000137196.1;Name=WP_000137196.1;Note=Wzc%3B catalyzes the autophosphorylation on tyrosine residues which downregulates the biosynthesis of colonic acid (an extracellular polysaccharide);gbkey=CDS;product=tyrosine-protein kinase wzc;protein_id=WP_000137196.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2878412 2878855 . - . ID=gene2868;Name=SH03_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14365;old_locus_tag=SH03_14370 NZ_CP010441.1 Protein Homology CDS 2878412 2878855 . - 0 ID=cds2794;Parent=gene2868;Dbxref=Genbank:WP_000482901.1;Name=WP_000482901.1;Note=Wzb shows phosphatase activity towards the autophosphorylated Wzc protein%2C which induces colanic acid biosynthesis%3B catalyzes the phosphorylation of UDP-glucose dehydrogenase%2C an enzyme involved in colanic acid biosynthesis;gbkey=CDS;product=protein-tyrosine phosphatase;protein_id=WP_000482901.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2878861 2880000 . - . ID=gene2869;Name=SH03_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14370;old_locus_tag=SH03_14375 NZ_CP010441.1 Protein Homology CDS 2878861 2880000 . - 0 ID=cds2795;Parent=gene2869;Dbxref=Genbank:WP_000978094.1;Name=WP_000978094.1;Note=required for the translocation of capsular polysaccharide through the outer membrane;gbkey=CDS;product=lipoprotein;protein_id=WP_000978094.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2880659 2882242 . + . ID=gene2870;Name=SH03_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14375;old_locus_tag=SH03_14380 NZ_CP010441.1 Protein Homology CDS 2880659 2882242 . + 0 ID=cds2796;Parent=gene2870;Dbxref=Genbank:WP_038432608.1;Name=WP_038432608.1;gbkey=CDS;product=membrane protein;protein_id=WP_038432608.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2882516 2884369 . - . ID=gene2871;Name=SH03_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14380;old_locus_tag=SH03_14385 NZ_CP010441.1 Protein Homology CDS 2882516 2884369 . - 0 ID=cds2797;Parent=gene2871;Dbxref=Genbank:WP_001252331.1;Name=WP_001252331.1;Note=YegA%3B inner membrane protein involved in the assembly of outer membrane proteins (OMPs)%3B asmA-null mutants show low lipopolysaccharide (LPS) levels%2C suggesting a role in LPS biogenesis and/or in restricting outer membrane fluidity%2C resulting on altered assembly of OMPs;gbkey=CDS;product=protein AsmA;protein_id=WP_001252331.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2884391 2884972 . - . ID=gene2872;Name=SH03_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14385;old_locus_tag=SH03_14390 NZ_CP010441.1 Protein Homology CDS 2884391 2884972 . - 0 ID=cds2798;Parent=gene2872;Dbxref=Genbank:WP_001234768.1;Name=WP_001234768.1;gbkey=CDS;product=deoxycytidine triphosphate deaminase;protein_id=WP_001234768.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2885064 2885705 . - . ID=gene2873;Name=SH03_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14390;old_locus_tag=SH03_14395 NZ_CP010441.1 Protein Homology CDS 2885064 2885705 . - 0 ID=cds2799;Parent=gene2873;Dbxref=Genbank:WP_001295424.1;Name=WP_001295424.1;gbkey=CDS;product=uridine kinase;protein_id=WP_001295424.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2886023 2889340 . + . ID=gene2874;Name=SH03_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14395;old_locus_tag=SH03_14400 NZ_CP010441.1 Protein Homology CDS 2886023 2889340 . + 0 ID=cds2800;Parent=gene2874;Dbxref=Genbank:WP_000043761.1;Name=WP_000043761.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_000043761.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2889449 2890297 . - . ID=gene2875;Name=SH03_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14400;old_locus_tag=SH03_14405 NZ_CP010441.1 Protein Homology CDS 2889449 2890297 . - 0 ID=cds2801;Parent=gene2875;Dbxref=Genbank:WP_000288420.1;Name=WP_000288420.1;Note=inducible%2C catalyzes the hydrolysis of alkylated DNA%2C releasing 3-methyladenine%2C 3-methylguanine%2C 7-methylguanine and 7-methyladenine;gbkey=CDS;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_000288420.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2890311 2890418 . - . ID=gene2876;Name=SH03_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14405;old_locus_tag=SH03_14410 NZ_CP010441.1 Protein Homology CDS 2890311 2890418 . - 0 ID=cds2802;Parent=gene2876;Dbxref=Genbank:WP_001144486.1;Name=WP_001144486.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001144486.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2890431 2891783 . + . ID=gene2877;Name=SH03_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14410;old_locus_tag=SH03_14415 NZ_CP010441.1 Protein Homology CDS 2890431 2891783 . + 0 ID=cds2803;Parent=gene2877;Dbxref=Genbank:WP_000469708.1;Name=WP_000469708.1;gbkey=CDS;product=Hsp70 chaperone family protein;protein_id=WP_000469708.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2891796 2893742 . - . ID=gene2878;Name=SH03_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14415;old_locus_tag=SH03_14420 NZ_CP010441.1 Protein Homology CDS 2891796 2893742 . - 0 ID=cds2804;Parent=gene2878;Dbxref=Genbank:WP_000856081.1;Name=WP_000856081.1;gbkey=CDS;product=protein kinase-related non-specific DNA-binding protein;protein_id=WP_000856081.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2893942 2894403 . + . ID=gene2879;Name=SH03_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14420;old_locus_tag=SH03_14425 NZ_CP010441.1 Protein Homology CDS 2893942 2894403 . + 0 ID=cds2805;Parent=gene2879;Dbxref=Genbank:WP_000722348.1;Name=WP_000722348.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000722348.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2894468 2895148 . - . ID=gene2880;Name=SH03_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14425;old_locus_tag=SH03_14430 NZ_CP010441.1 Protein Homology CDS 2894468 2895148 . - 0 ID=cds2806;Parent=gene2880;Dbxref=Genbank:WP_001333480.1;Name=WP_001333480.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001333480.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2895226 2895885 . - . ID=gene2881;Name=SH03_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14430;old_locus_tag=SH03_14435 NZ_CP010441.1 Protein Homology CDS 2895226 2895885 . - 0 ID=cds2807;Parent=gene2881;Dbxref=Genbank:WP_000003154.1;Name=WP_000003154.1;gbkey=CDS;product=VMA domain protein;protein_id=WP_000003154.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2896773 2898020 . + . ID=gene2882;Name=SH03_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14435;old_locus_tag=SH03_14440 NZ_CP010441.1 Protein Homology CDS 2896773 2898020 . + 0 ID=cds2808;Parent=gene2882;Dbxref=Genbank:WP_000678989.1;Name=WP_000678989.1;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;gbkey=CDS;product=multidrug resistance protein MdtA;protein_id=WP_000678989.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2898020 2901142 . + . ID=gene2883;Name=SH03_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14440;old_locus_tag=SH03_14445 NZ_CP010441.1 Protein Homology CDS 2898020 2901142 . + 0 ID=cds2809;Parent=gene2883;Dbxref=Genbank:WP_001197875.1;Name=WP_001197875.1;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;gbkey=CDS;product=multidrug resistance protein MdtB;protein_id=WP_001197875.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2901143 2904220 . + . ID=gene2884;Name=SH03_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14445;old_locus_tag=SH03_14450 NZ_CP010441.1 Protein Homology CDS 2901143 2904220 . + 0 ID=cds2810;Parent=gene2884;Dbxref=Genbank:WP_000667481.1;Name=WP_000667481.1;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;gbkey=CDS;product=multidrug resistance protein MdtC;protein_id=WP_000667481.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2904221 2905636 . + . ID=gene2885;Name=SH03_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14450;old_locus_tag=SH03_14455 NZ_CP010441.1 Protein Homology CDS 2904221 2905636 . + 0 ID=cds2811;Parent=gene2885;Dbxref=Genbank:WP_000130850.1;Name=WP_000130850.1;gbkey=CDS;product=citrate/iron-citrate/zinc-citrate efflux transporter;protein_id=WP_000130850.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2905633 2907036 . + . ID=gene2886;Name=SH03_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14455;old_locus_tag=SH03_14460 NZ_CP010441.1 Protein Homology CDS 2905633 2907036 . + 0 ID=cds2812;Parent=gene2886;Dbxref=Genbank:WP_000675150.1;Name=WP_000675150.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_000675150.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2907033 2907755 . + . ID=gene2887;Name=SH03_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14460;old_locus_tag=SH03_14465 NZ_CP010441.1 Protein Homology CDS 2907033 2907755 . + 0 ID=cds2813;Parent=gene2887;Dbxref=Genbank:WP_000137877.1;Name=WP_000137877.1;Note=response regulator in two-component regulatory system with BaeS%3B regulator of RNA synthesis%2C flagellar biosynthesis%2C chemotaxis and transport;gbkey=CDS;product=two-component system response regulator;protein_id=WP_000137877.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2907946 2908278 . + . ID=gene2888;Name=SH03_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14465;old_locus_tag=SH03_14470 NZ_CP010441.1 Protein Homology CDS 2907946 2908278 . + 0 ID=cds2814;Parent=gene2888;Dbxref=Genbank:WP_001350529.1;Name=WP_001350529.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001350529.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2908425 2909786 . + . ID=gene2889;Name=SH03_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14470;old_locus_tag=SH03_14475 NZ_CP010441.1 Protein Homology CDS 2908425 2909786 . + 0 ID=cds2815;Parent=gene2889;Dbxref=Genbank:WP_000476011.1;Name=WP_000476011.1;gbkey=CDS;product=protease;protein_id=WP_000476011.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2910492 2910758 . - . ID=gene2890;Name=SH03_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14480 NZ_CP010441.1 Protein Homology CDS 2910492 2910758 . - 0 ID=cds2816;Parent=gene2890;Dbxref=Genbank:WP_042405223.1;Name=WP_042405223.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042405223.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2910746 2911078 . - . ID=gene2891;Name=SH03_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14485;old_locus_tag=SH03_14490 NZ_CP010441.1 Protein Homology CDS 2910746 2911078 . - 0 ID=cds2817;Parent=gene2891;Dbxref=Genbank:WP_001300979.1;Name=WP_001300979.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001300979.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2911469 2912368 . + . ID=gene2892;Name=SH03_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14490;old_locus_tag=SH03_14495 NZ_CP010441.1 Protein Homology CDS 2911469 2912368 . + 0 ID=cds2818;Parent=gene2892;Dbxref=Genbank:WP_000807348.1;Name=WP_000807348.1;Note=cytosolic protein with phosphatidylglycerol kinase activity%3B undetermined physiological role;gbkey=CDS;product=phosphatidylglycerol kinase metal-dependent;protein_id=WP_000807348.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2912450 2912896 . - . ID=gene2893;Name=SH03_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14495;old_locus_tag=SH03_14500 NZ_CP010441.1 Protein Homology CDS 2912450 2912896 . - 0 ID=cds2819;Parent=gene2893;Dbxref=Genbank:WP_000903596.1;Name=WP_000903596.1;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_000903596.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 2912926 2914185 . + . ID=id163;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 2912993 2913292 . + . ID=gene2894;Name=SH03_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14500;old_locus_tag=SH03_14505 NZ_CP010441.1 Protein Homology CDS 2912993 2913292 . + 0 ID=cds2820;Parent=gene2894;Dbxref=Genbank:WP_000169527.1;Name=WP_000169527.1;gbkey=CDS;product=transposase;protein_id=WP_000169527.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2913289 2914155 . + . ID=gene2895;Name=SH03_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14505;old_locus_tag=SH03_14510 NZ_CP010441.1 Protein Homology CDS 2913289 2914155 . + 0 ID=cds2821;Parent=gene2895;Dbxref=Genbank:WP_000878218.1;Name=WP_000878218.1;gbkey=CDS;product=transposase;protein_id=WP_000878218.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2914185 2914490 . - . ID=gene2896;Name=SH03_RS14510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS14510;partial=true;pseudo=true;start_range=.,2914185 NZ_CP010441.1 Protein Homology CDS 2914185 2914490 . - 0 ID=cds2822;Parent=gene2896;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transcriptional regulator;pseudo=true;start_range=.,2914185;transl_table=11 NZ_CP010441.1 RefSeq gene 2914590 2915630 . - . ID=gene2897;Name=SH03_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14515;old_locus_tag=SH03_14520 NZ_CP010441.1 Protein Homology CDS 2914590 2915630 . - 0 ID=cds2823;Parent=gene2897;Dbxref=Genbank:WP_000844219.1;Name=WP_000844219.1;Note=Zn-dependent%3B NAD(P)-binding%3B catalyzes the formation of tagatose-6-phosphate from galactitol-1-phosphate;gbkey=CDS;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_000844219.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2915678 2917033 . - . ID=gene2898;Name=SH03_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14520;old_locus_tag=SH03_14525 NZ_CP010441.1 Protein Homology CDS 2915678 2917033 . - 0 ID=cds2824;Parent=gene2898;Dbxref=Genbank:WP_000490679.1;Name=WP_000490679.1;gbkey=CDS;product=galactitol permease IIC component;protein_id=WP_000490679.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2917037 2917321 . - . ID=gene2899;Name=SH03_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14525;old_locus_tag=SH03_14530 NZ_CP010441.1 Protein Homology CDS 2917037 2917321 . - 0 ID=cds2825;Parent=gene2899;Dbxref=Genbank:WP_000823270.1;Name=WP_000823270.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=galactitol-specific phosphotransferase enzyme IIB component;protein_id=WP_000823270.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2917352 2917804 . - . ID=gene2900;Name=SH03_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14530;old_locus_tag=SH03_14535 NZ_CP010441.1 Protein Homology CDS 2917352 2917804 . - 0 ID=cds2826;Parent=gene2900;Dbxref=Genbank:WP_000182899.1;Name=WP_000182899.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=galactitol-specific phosphotransferase enzyme IIA component;protein_id=WP_000182899.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2917814 2919076 . - . ID=gene2901;Name=SH03_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14535;old_locus_tag=SH03_14540 NZ_CP010441.1 Protein Homology CDS 2917814 2919076 . - 0 ID=cds2827;Parent=gene2901;Dbxref=Genbank:WP_000853883.1;Name=WP_000853883.1;Note=part of the galacitol catabolism pathway%3B with GatY catalyzes the formation of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate from tagatose-1%2C6-bisphosphate;gbkey=CDS;product=tagatose-1%2C6-bisphosphate aldolase;protein_id=WP_000853883.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2919105 2919959 . - . ID=gene2902;Name=gatY;gbkey=Gene;gene=gatY;gene_biotype=protein_coding;locus_tag=SH03_RS14540;old_locus_tag=SH03_14545 NZ_CP010441.1 Protein Homology CDS 2919105 2919959 . - 0 ID=cds2828;Parent=gene2902;Dbxref=Genbank:WP_001307281.1;Name=WP_001307281.1;Note=catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in enteric bacteria there are two D-tagatose 1%2C6-bisphosphate-specific aldolases: KbaY (also called AgaY)%2C involved in catabolism of N-acetyl-galactosamine and D-galactosamine%2C and GatY which is part of the galactitol catabolism pathway;gbkey=CDS;gene=gatY;product=tagatose-1%2C6-bisphosphate aldolase;protein_id=WP_001307281.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2920267 2921319 . - . ID=gene2903;Name=SH03_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14545;old_locus_tag=SH03_14550 NZ_CP010441.1 Protein Homology CDS 2920267 2921319 . - 0 ID=cds2829;Parent=gene2903;Dbxref=Genbank:WP_000129551.1;Name=WP_000129551.1;Note=catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1%2C6-bisphosphate;gbkey=CDS;product=fructose-bisphosphate aldolase;protein_id=WP_000129551.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2921576 2922853 . + . ID=gene2904;Name=SH03_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14550;old_locus_tag=SH03_14555 NZ_CP010441.1 Protein Homology CDS 2921576 2922853 . + 0 ID=cds2830;Parent=gene2904;Dbxref=Genbank:WP_000858484.1;Name=WP_000858484.1;gbkey=CDS;product=nucleoside transporter low affinity;protein_id=WP_000858484.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2922850 2923854 . + . ID=gene2905;Name=SH03_RS14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14555;old_locus_tag=SH03_14560 NZ_CP010441.1 Protein Homology CDS 2922850 2923854 . + 0 ID=cds2831;Parent=gene2905;Dbxref=Genbank:WP_000846217.1;Name=WP_000846217.1;gbkey=CDS;product=ADP-ribosylglycohydrolase;protein_id=WP_000846217.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2923851 2924816 . + . ID=gene2906;Name=SH03_RS14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14560;old_locus_tag=SH03_14565 NZ_CP010441.1 Protein Homology CDS 2923851 2924816 . + 0 ID=cds2832;Parent=gene2906;Dbxref=Genbank:WP_000012001.1;Name=WP_000012001.1;gbkey=CDS;product=kinase;protein_id=WP_000012001.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2924790 2925536 . - . ID=gene2907;Name=SH03_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14565;old_locus_tag=SH03_14570 NZ_CP010441.1 Protein Homology CDS 2924790 2925536 . - 0 ID=cds2833;Parent=gene2907;Dbxref=Genbank:WP_000434038.1;Name=WP_000434038.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000434038.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2925588 2926406 . - . ID=gene2908;Name=SH03_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14570;old_locus_tag=SH03_14575 NZ_CP010441.1 Protein Homology CDS 2925588 2926406 . - 0 ID=cds2834;Parent=gene2908;Dbxref=Genbank:WP_001351783.1;Name=WP_001351783.1;gbkey=CDS;product=family 25 glycosyl hydrolase;protein_id=WP_001351783.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2926471 2927271 . - . ID=gene2909;Name=SH03_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14575;old_locus_tag=SH03_14580 NZ_CP010441.1 Protein Homology CDS 2926471 2927271 . - 0 ID=cds2835;Parent=gene2909;Dbxref=Genbank:WP_000822274.1;Name=WP_000822274.1;Note=catalyzes the formation hydroxymethylpyrimidine phosphate from hydroxymethylpyrimidine and the formation of of 4-amino-2-methyl-5-diphosphomethylpyrimidine from hydroxymethylpyrimidine phosphate;gbkey=CDS;product=hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;protein_id=WP_000822274.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2927268 2928056 . - . ID=gene2910;Name=SH03_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14580;old_locus_tag=SH03_14585 NZ_CP010441.1 Protein Homology CDS 2927268 2928056 . - 0 ID=cds2836;Parent=gene2910;Dbxref=Genbank:WP_001195564.1;Name=WP_001195564.1;gbkey=CDS;product=hydroxyethylthiazole kinase;protein_id=WP_001195564.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2928279 2928551 . - . ID=gene2911;Name=SH03_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14585;old_locus_tag=SH03_14590 NZ_CP010441.1 Protein Homology CDS 2928279 2928551 . - 0 ID=cds2837;Parent=gene2911;Dbxref=Genbank:WP_000019944.1;Name=WP_000019944.1;Note=DNA-binding%3B binds the RcnA promotor;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000019944.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2928672 2929496 . + . ID=gene2912;Name=SH03_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14590;old_locus_tag=SH03_14595 NZ_CP010441.1 Protein Homology CDS 2928672 2929496 . + 0 ID=cds2838;Parent=gene2912;Dbxref=Genbank:WP_000134636.1;Name=WP_000134636.1;Note=membrane protein conferring nickel and cobalt resistance;gbkey=CDS;product=nickel/cobalt efflux system RcnA;protein_id=WP_000134636.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2929715 2930053 . + . ID=gene2913;Name=SH03_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14595;old_locus_tag=SH03_14600 NZ_CP010441.1 Protein Homology CDS 2929715 2930053 . + 0 ID=cds2839;Parent=gene2913;Dbxref=Genbank:WP_000153067.1;Name=WP_000153067.1;gbkey=CDS;product=nickel/cobalt homeostasis protein RcnB;protein_id=WP_000153067.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2930135 2931169 . - . ID=gene2914;Name=SH03_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14600;old_locus_tag=SH03_14605 NZ_CP010441.1 Protein Homology CDS 2930135 2931169 . - 0 ID=cds2840;Parent=gene2914;Dbxref=Genbank:WP_000405713.1;Name=WP_000405713.1;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=WP_000405713.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2931185 2933665 . - . ID=gene2915;Name=SH03_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14605;old_locus_tag=SH03_14610 NZ_CP010441.1 Protein Homology CDS 2931185 2933665 . - 0 ID=cds2841;Parent=gene2915;Dbxref=Genbank:WP_000945454.1;Name=WP_000945454.1;gbkey=CDS;product=outer membrane usher protein YehB;protein_id=WP_000945454.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2933681 2934355 . - . ID=gene2916;Name=SH03_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14610;old_locus_tag=SH03_14615 NZ_CP010441.1 Protein Homology CDS 2933681 2934355 . - 0 ID=cds2842;Parent=gene2916;Dbxref=Genbank:WP_000677393.1;Name=WP_000677393.1;gbkey=CDS;product=fimbrial assembly chaperone protein StcB;protein_id=WP_000677393.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2934435 2934977 . - . ID=gene2917;Name=SH03_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14615;old_locus_tag=SH03_14620 NZ_CP010441.1 Protein Homology CDS 2934435 2934977 . - 0 ID=cds2843;Parent=gene2917;Dbxref=Genbank:WP_000830456.1;Name=WP_000830456.1;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=WP_000830456.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2935166 2935346 . + . ID=gene2918;Name=SH03_RS14620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS14620;pseudo=true NZ_CP010441.1 Protein Homology CDS 2935166 2935346 . + 0 ID=cds2844;Parent=gene2918;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:2935169..2935171%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq gene 2935270 2935551 . - . ID=gene2919;Name=SH03_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14625;old_locus_tag=SH03_14630 NZ_CP010441.1 Protein Homology CDS 2935270 2935551 . - 0 ID=cds2845;Parent=gene2919;Dbxref=Genbank:WP_001324851.1;Name=WP_001324851.1;gbkey=CDS;product=DUF2574 domain-containing protein;protein_id=WP_001324851.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2935814 2936923 . - . ID=gene2920;Name=SH03_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14630;old_locus_tag=SH03_14635 NZ_CP010441.1 Protein Homology CDS 2935814 2936923 . - 0 ID=cds2846;Parent=gene2920;Dbxref=Genbank:WP_001005448.1;Name=WP_001005448.1;gbkey=CDS;product=protein mrp;protein_id=WP_001005448.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2937055 2939088 . + . ID=gene2921;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=SH03_RS14635;old_locus_tag=SH03_14640 NZ_CP010441.1 Protein Homology CDS 2937055 2939088 . + 0 ID=cds2847;Parent=gene2921;Dbxref=Genbank:WP_001350533.1;Name=WP_001350533.1;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;gbkey=CDS;gene=metG;product=methionine--tRNA ligase;protein_id=WP_001350533.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2939229 2940053 . + . ID=gene2922;Name=SH03_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14640;old_locus_tag=SH03_14645 NZ_CP010441.1 Protein Homology CDS 2939229 2940053 . + 0 ID=cds2848;Parent=gene2922;Dbxref=Genbank:WP_001215566.1;Name=WP_001215566.1;gbkey=CDS;product=molybdenum metabolism regulator;protein_id=WP_001215566.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2941665 2943024 . + . ID=gene2923;Name=SH03_RS14645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS14645;pseudo=true NZ_CP010441.1 Protein Homology CDS 2941665 2943024 . + 0 ID=cds2849;Parent=gene2923;exception=annotated by transcript or proteomic data;gbkey=CDS;product=regulator;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 2943034 2946666 . + . ID=gene2924;Name=SH03_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14650;old_locus_tag=SH03_14655 NZ_CP010441.1 Protein Homology CDS 2943034 2946666 . + 0 ID=cds2850;Parent=gene2924;Dbxref=Genbank:WP_000356817.1;Name=WP_000356817.1;gbkey=CDS;product=DUF4132 domain-containing protein;protein_id=WP_000356817.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2946727 2947044 . + . ID=gene2925;Name=SH03_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14655;old_locus_tag=SH03_14660 NZ_CP010441.1 Protein Homology CDS 2946727 2947044 . + 0 ID=cds2851;Parent=gene2925;Dbxref=Genbank:WP_000636925.1;Name=WP_000636925.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000636925.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2947351 2948439 . + . ID=gene2926;Name=SH03_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14660;old_locus_tag=SH03_14665 NZ_CP010441.1 Protein Homology CDS 2947351 2948439 . + 0 ID=cds2852;Parent=gene2926;Dbxref=Genbank:WP_001350535.1;Name=WP_001350535.1;gbkey=CDS;product=hexameric AAA+ MoxR family ATPase;protein_id=WP_001350535.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2948450 2950729 . + . ID=gene2927;Name=SH03_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14665;old_locus_tag=SH03_14670 NZ_CP010441.1 Protein Homology CDS 2948450 2950729 . + 0 ID=cds2853;Parent=gene2927;Dbxref=Genbank:WP_001294387.1;Name=WP_001294387.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001294387.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2950722 2951858 . + . ID=gene2928;Name=SH03_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14670;old_locus_tag=SH03_14675 NZ_CP010441.1 Protein Homology CDS 2950722 2951858 . + 0 ID=cds2854;Parent=gene2928;Dbxref=Genbank:WP_001333512.1;Name=WP_001333512.1;gbkey=CDS;product=VMA domain YehL ATPase stimulator;protein_id=WP_001333512.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2951855 2953699 . + . ID=gene2929;Name=SH03_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14675;old_locus_tag=SH03_14680 NZ_CP010441.1 Protein Homology CDS 2951855 2953699 . + 0 ID=cds2855;Parent=gene2929;Dbxref=Genbank:WP_001087218.1;Name=WP_001087218.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001087218.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2953980 2954441 . + . ID=gene2930;Name=SH03_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14680;old_locus_tag=SH03_14685 NZ_CP010441.1 Protein Homology CDS 2953980 2954441 . + 0 ID=cds2856;Parent=gene2930;Dbxref=Genbank:WP_001295429.1;Name=WP_001295429.1;gbkey=CDS;product=DUF1307 domain-containing protein;protein_id=WP_001295429.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2954481 2954951 . - . ID=gene2931;Name=SH03_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14685;old_locus_tag=SH03_14690 NZ_CP010441.1 Protein Homology CDS 2954481 2954951 . - 0 ID=cds2857;Parent=gene2931;Dbxref=Genbank:WP_000950409.1;Name=WP_000950409.1;gbkey=CDS;product=DUF1456 domain-containing protein;protein_id=WP_000950409.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2954998 2955717 . - . ID=gene2932;Name=SH03_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14690;old_locus_tag=SH03_14695 NZ_CP010441.1 Protein Homology CDS 2954998 2955717 . - 0 ID=cds2858;Parent=gene2932;Dbxref=Genbank:WP_000598641.1;Name=WP_000598641.1;Note=unknown function%3B when overproduced it confers drug-resistance;gbkey=CDS;product=two-component system response regulator;protein_id=WP_000598641.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2955714 2957399 . - . ID=gene2933;Name=SH03_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14695;old_locus_tag=SH03_14700 NZ_CP010441.1 Protein Homology CDS 2955714 2957399 . - 0 ID=cds2859;Parent=gene2933;Dbxref=Genbank:WP_001295431.1;Name=WP_001295431.1;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_001295431.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2957621 2958352 . + . ID=gene2934;Name=SH03_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14700;old_locus_tag=SH03_14705 NZ_CP010441.1 Protein Homology CDS 2957621 2958352 . + 0 ID=cds2860;Parent=gene2934;Dbxref=Genbank:WP_001240401.1;Name=WP_001240401.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001240401.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2958412 2958519 . + . ID=gene2935;Name=SH03_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14705;old_locus_tag=SH03_14710 NZ_CP010441.1 Protein Homology CDS 2958412 2958519 . + 0 ID=cds2861;Parent=gene2935;Dbxref=Genbank:WP_001216963.1;Name=WP_001216963.1;gbkey=CDS;product=membrane protein;protein_id=WP_001216963.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2958500 2959231 . - . ID=gene2936;Name=SH03_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14710;old_locus_tag=SH03_14715 NZ_CP010441.1 Protein Homology CDS 2958500 2959231 . - 0 ID=cds2862;Parent=gene2936;Dbxref=Genbank:WP_000783123.1;Name=WP_000783123.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_000783123.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2959236 2960162 . - . ID=gene2937;Name=SH03_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14715;old_locus_tag=SH03_14720 NZ_CP010441.1 Protein Homology CDS 2959236 2960162 . - 0 ID=cds2863;Parent=gene2937;Dbxref=Genbank:WP_000569315.1;Name=WP_000569315.1;gbkey=CDS;product=ABC transporter ATPase;protein_id=WP_000569315.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2960155 2961312 . - . ID=gene2938;Name=SH03_RS14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14720;old_locus_tag=SH03_14725 NZ_CP010441.1 Protein Homology CDS 2960155 2961312 . - 0 ID=cds2864;Parent=gene2938;Dbxref=Genbank:WP_000220837.1;Name=WP_000220837.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_000220837.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2961319 2962236 . - . ID=gene2939;Name=SH03_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14725;old_locus_tag=SH03_14730 NZ_CP010441.1 Protein Homology CDS 2961319 2962236 . - 0 ID=cds2865;Parent=gene2939;Dbxref=Genbank:WP_001130308.1;Name=WP_001130308.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_001130308.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2962447 2964744 . - . ID=gene2940;Name=SH03_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14730;old_locus_tag=SH03_14735 NZ_CP010441.1 Protein Homology CDS 2962447 2964744 . - 0 ID=cds2866;Parent=gene2940;Dbxref=Genbank:WP_000871504.1;Name=WP_000871504.1;Note=catalyzes the hydrolysis of terminal beta-D-glucosyl residues;gbkey=CDS;product=periplasmic beta-glucosidase;protein_id=WP_000871504.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2964940 2966655 . + . ID=gene2941;Name=SH03_RS14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14735;old_locus_tag=SH03_14740 NZ_CP010441.1 Protein Homology CDS 2964940 2966655 . + 0 ID=cds2867;Parent=gene2941;Dbxref=Genbank:WP_000097403.1;Name=WP_000097403.1;Note=component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent;gbkey=CDS;product=lactate dehydrogenase;protein_id=WP_000097403.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2966693 2967625 . - . ID=gene2942;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=SH03_RS14740;old_locus_tag=SH03_14745 NZ_CP010441.1 Protein Homology CDS 2966693 2967625 . - 0 ID=cds2868;Parent=gene2942;Dbxref=Genbank:WP_001319943.1;Name=WP_001319943.1;Note=specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi%3B Penicillin-binding protein 7;gbkey=CDS;gene=pbpG;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_001319943.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2967799 2968386 . - . ID=gene2943;Name=SH03_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14745;old_locus_tag=SH03_14750 NZ_CP010441.1 Protein Homology CDS 2967799 2968386 . - 0 ID=cds2869;Parent=gene2943;Dbxref=Genbank:WP_001295454.1;Name=WP_001295454.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001295454.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2968556 2969134 . + . ID=gene2944;Name=SH03_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14750;old_locus_tag=SH03_14755 NZ_CP010441.1 Protein Homology CDS 2968556 2969134 . + 0 ID=cds2870;Parent=gene2944;Dbxref=Genbank:WP_001296821.1;Name=WP_001296821.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001296821.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2969264 2970025 . - . ID=gene2945;Name=SH03_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14755;old_locus_tag=SH03_14760 NZ_CP010441.1 Protein Homology CDS 2969264 2970025 . - 0 ID=cds2871;Parent=gene2945;Dbxref=Genbank:WP_000079538.1;Name=WP_000079538.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_000079538.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2970078 2971513 . - . ID=gene2946;Name=SH03_RS14760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS14760;pseudo=true NZ_CP010441.1 Protein Homology CDS 2970078 2971513 . - 0 ID=cds2872;Parent=gene2946;Note=may be involved in resistance to puromycin%2C acriflavine and tetraphenylarsonium chloride;exception=annotated by transcript or proteomic data;gbkey=CDS;product=multidrug transporter permease;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 2971737 2971820 . + . ID=gene2947;Name=SH03_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14765;old_locus_tag=SH03_14770 NZ_CP010441.1 Protein Homology CDS 2971737 2971820 . + 0 ID=cds2873;Parent=gene2947;Dbxref=Genbank:WP_000691708.1;Name=WP_000691708.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000691708.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 2971912 2972131 . + . ID=id164;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 2972193 2973140 . - . ID=gene2948;Name=SH03_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14770;old_locus_tag=SH03_14775 NZ_CP010441.1 Protein Homology CDS 2972193 2973140 . - 0 ID=cds2874;Parent=gene2948;Dbxref=Genbank:WP_001264861.1;Name=WP_001264861.1;gbkey=CDS;product=tRNA-dihydrouridine synthase C;protein_id=WP_001264861.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2973379 2973777 . + . ID=gene2949;Name=SH03_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14775;old_locus_tag=SH03_14780 NZ_CP010441.1 Protein Homology CDS 2973379 2973777 . + 0 ID=cds2875;Parent=gene2949;Dbxref=Genbank:WP_001295452.1;Name=WP_001295452.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001295452.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2973774 2974469 . + . ID=gene2950;Name=SH03_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14780;old_locus_tag=SH03_14785 NZ_CP010441.1 Protein Homology CDS 2973774 2974469 . + 0 ID=cds2876;Parent=gene2950;Dbxref=Genbank:WP_000968208.1;Name=WP_000968208.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000968208.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2974599 2975483 . + . ID=gene2951;Name=SH03_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14785;old_locus_tag=SH03_14790 NZ_CP010441.1 Protein Homology CDS 2974599 2975483 . + 0 ID=cds2877;Parent=gene2951;Dbxref=Genbank:WP_000553555.1;Name=WP_000553555.1;Note=Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis;gbkey=CDS;product=cytidine deaminase;protein_id=WP_000553555.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2975633 2976352 . + . ID=gene2952;Name=SH03_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14790;old_locus_tag=SH03_14795 NZ_CP010441.1 Protein Homology CDS 2975633 2976352 . + 0 ID=cds2878;Parent=gene2952;Dbxref=Genbank:WP_000920064.1;Name=WP_000920064.1;Note=involved in vancomycin sensitivity and other barrier functions of the cell envelope;gbkey=CDS;product=protein SanA;protein_id=WP_000920064.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2976355 2976594 . + . ID=gene2953;Name=SH03_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14795;old_locus_tag=SH03_14800 NZ_CP010441.1 Protein Homology CDS 2976355 2976594 . + 0 ID=cds2879;Parent=gene2953;Dbxref=Genbank:WP_000383096.1;Name=WP_000383096.1;gbkey=CDS;product=DUF2542 domain-containing protein;protein_id=WP_000383096.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2976788 2978026 . + . ID=gene2954;Name=SH03_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14800;old_locus_tag=SH03_14805 NZ_CP010441.1 Protein Homology CDS 2976788 2978026 . + 0 ID=cds2880;Parent=gene2954;Dbxref=Genbank:WP_001136389.1;Name=WP_001136389.1;gbkey=CDS;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreT;protein_id=WP_001136389.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2978020 2979255 . + . ID=gene2955;Name=SH03_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14805;old_locus_tag=SH03_14810 NZ_CP010441.1 Protein Homology CDS 2978020 2979255 . + 0 ID=cds2881;Parent=gene2955;Dbxref=Genbank:WP_000956071.1;Name=WP_000956071.1;gbkey=CDS;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_000956071.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2979498 2980508 . - . ID=gene2956;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=SH03_RS14810;old_locus_tag=SH03_14815 NZ_CP010441.1 Protein Homology CDS 2979498 2980508 . - 0 ID=cds2882;Parent=gene2956;Dbxref=Genbank:WP_038432609.1;Name=WP_038432609.1;Note=ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex;gbkey=CDS;gene=mglC;product=beta-methylgalactoside transporter permease;protein_id=WP_038432609.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 2980632 2981403 . + . ID=id165;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 2980650 2981153 . - . ID=gene2957;Name=SH03_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14815;old_locus_tag=SH03_14820 NZ_CP010441.1 Protein Homology CDS 2980650 2981153 . - 0 ID=cds2883;Parent=gene2957;Dbxref=Genbank:WP_001119362.1;Name=WP_001119362.1;gbkey=CDS;product=transposase;protein_id=WP_001119362.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2981304 2982821 . - . ID=gene2958;Name=SH03_RS14820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS14820;pseudo=true NZ_CP010441.1 Protein Homology CDS 2981304 2982821 . - 0 ID=cds2884;Parent=gene2958;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;pseudo=true;transl_except=(pos:complement(2981376..2981378)%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq gene 2982882 2983880 . - . ID=gene2959;Name=SH03_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14825;old_locus_tag=SH03_14830 NZ_CP010441.1 Protein Homology CDS 2982882 2983880 . - 0 ID=cds2885;Parent=gene2959;Dbxref=Genbank:WP_001036964.1;Name=WP_001036964.1;Note=wtih MglAC is involved in the transport of beta-methylgalactoside;gbkey=CDS;product=D-galactose-binding periplasmic protein;protein_id=WP_001036964.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2984160 2985200 . - . ID=gene2960;Name=SH03_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14830;old_locus_tag=SH03_14835 NZ_CP010441.1 Protein Homology CDS 2984160 2985200 . - 0 ID=cds2886;Parent=gene2960;Dbxref=Genbank:WP_000628648.1;Name=WP_000628648.1;Note=controls transcription of galETKM;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000628648.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2985190 2985393 . + . ID=gene2961;Name=SH03_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14835;old_locus_tag=SH03_14840 NZ_CP010441.1 Protein Homology CDS 2985190 2985393 . + 0 ID=cds2887;Parent=gene2961;Dbxref=Genbank:WP_001308771.1;Name=WP_001308771.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001308771.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2985342 2986499 . - . ID=gene2962;Name=SH03_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14840;old_locus_tag=SH03_14845 NZ_CP010441.1 Protein Homology CDS 2985342 2986499 . - 0 ID=cds2888;Parent=gene2962;Dbxref=Genbank:WP_000440926.1;Name=WP_000440926.1;gbkey=CDS;product=DUF418 domain-containing protein;protein_id=WP_000440926.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2986516 2987184 . - . ID=gene2963;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=SH03_RS14845;old_locus_tag=SH03_14850 NZ_CP010441.1 Protein Homology CDS 2986516 2987184 . - 0 ID=cds2889;Parent=gene2963;Dbxref=Genbank:WP_001139613.1;Name=WP_001139613.1;Note=involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer;gbkey=CDS;gene=folE;product=GTP cyclohydrolase 1;protein_id=WP_001139613.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2987338 2987514 . + . ID=gene2964;Name=SH03_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14850;old_locus_tag=SH03_14855 NZ_CP010441.1 Protein Homology CDS 2987338 2987514 . + 0 ID=cds2890;Parent=gene2964;Dbxref=Genbank:WP_001308773.1;Name=WP_001308773.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001308773.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2987442 2988278 . + . ID=gene2965;Name=SH03_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14855;old_locus_tag=SH03_14860 NZ_CP010441.1 Protein Homology CDS 2987442 2988278 . + 0 ID=cds2891;Parent=gene2965;Dbxref=Genbank:WP_000425438.1;Name=WP_000425438.1;gbkey=CDS;product=S-formylglutathione hydrolase YeiG;protein_id=WP_000425438.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2988310 2990301 . - . ID=gene2966;Name=SH03_RS14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14860;old_locus_tag=SH03_14865 NZ_CP010441.1 Protein Homology CDS 2988310 2990301 . - 0 ID=cds2892;Parent=gene2966;Dbxref=Genbank:WP_000489247.1;Name=WP_000489247.1;Note=Cir%3B FeuA%3B CirA%3B receptor protein for siderophores (colicin IA%2C IB and V) and microcins (E492%2C H47%2C and M)%3B TonB-dependent%3B able to transport monomers%2C dimer%2C and linear trimers of 2%2C3-dihydorxybenzoylserine%3B outer membrane protein;gbkey=CDS;product=colicin I receptor;protein_id=WP_000489247.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2990595 2992064 . - . ID=gene2967;Name=SH03_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14865;old_locus_tag=SH03_14870 NZ_CP010441.1 Protein Homology CDS 2990595 2992064 . - 0 ID=cds2893;Parent=gene2967;Dbxref=Genbank:WP_000253273.1;Name=WP_000253273.1;gbkey=CDS;product=lysine-specific permease;protein_id=WP_000253273.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2992269 2993150 . - . ID=gene2968;Name=SH03_RS14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14870;old_locus_tag=SH03_14875 NZ_CP010441.1 Protein Homology CDS 2992269 2993150 . - 0 ID=cds2894;Parent=gene2968;Dbxref=Genbank:WP_000548294.1;Name=WP_000548294.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000548294.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2993249 2994298 . + . ID=gene2969;Name=SH03_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14875;old_locus_tag=SH03_14880 NZ_CP010441.1 Protein Homology CDS 2993249 2994298 . + 0 ID=cds2895;Parent=gene2969;Dbxref=Genbank:WP_000182053.1;Name=WP_000182053.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000182053.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2994372 2995229 . + . ID=gene2970;Name=SH03_RS14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14880;old_locus_tag=SH03_14885 NZ_CP010441.1 Protein Homology CDS 2994372 2995229 . + 0 ID=cds2896;Parent=gene2970;Dbxref=Genbank:WP_000873894.1;Name=WP_000873894.1;Note=Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues;gbkey=CDS;product=endonuclease IV with intrinsic 3''-5'' exonuclease activity;protein_id=WP_000873894.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2995232 2996320 . + . ID=gene2971;Name=SH03_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14885;old_locus_tag=SH03_14890 NZ_CP010441.1 Protein Homology CDS 2995232 2996320 . + 0 ID=cds2897;Parent=gene2971;Dbxref=Genbank:WP_001065016.1;Name=WP_001065016.1;gbkey=CDS;product=kinase;protein_id=WP_001065016.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2996427 2997677 . - . ID=gene2972;Name=SH03_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14890;old_locus_tag=SH03_14895 NZ_CP010441.1 Protein Homology CDS 2996427 2997677 . - 0 ID=cds2898;Parent=gene2972;Dbxref=Genbank:WP_000382966.1;Name=WP_000382966.1;gbkey=CDS;product=nucleoside permease NupX;protein_id=WP_000382966.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2997777 2998718 . - . ID=gene2973;Name=rihB;gbkey=Gene;gene=rihB;gene_biotype=protein_coding;locus_tag=SH03_RS14895;old_locus_tag=SH03_14900 NZ_CP010441.1 Protein Homology CDS 2997777 2998718 . - 0 ID=cds2899;Parent=gene2973;Dbxref=Genbank:WP_000415429.1;Name=WP_000415429.1;Note=Hydrolyzes cytidine or uridine to ribose and cytosine or uracil%2C respectively;gbkey=CDS;gene=rihB;product=pyrimidine-specific ribonucleoside hydrolase RihB;protein_id=WP_000415429.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2998848 2999546 . + . ID=gene2974;Name=SH03_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14900;old_locus_tag=SH03_14905 NZ_CP010441.1 Protein Homology CDS 2998848 2999546 . + 0 ID=cds2900;Parent=gene2974;Dbxref=Genbank:WP_000658575.1;Name=WP_000658575.1;Note=activator of nucleoside metabolism;gbkey=CDS;product=Crp/Fnr family transcriptional regulator;protein_id=WP_000658575.1;transl_table=11 NZ_CP010441.1 RefSeq gene 2999617 3000867 . - . ID=gene2975;Name=SH03_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14905;old_locus_tag=SH03_14910 NZ_CP010441.1 Protein Homology CDS 2999617 3000867 . - 0 ID=cds2901;Parent=gene2975;Dbxref=Genbank:WP_000353878.1;Name=WP_000353878.1;gbkey=CDS;product=nucleoside transporter;protein_id=WP_000353878.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3000961 3001899 . - . ID=gene2976;Name=SH03_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14910;old_locus_tag=SH03_14915 NZ_CP010441.1 Protein Homology CDS 3000961 3001899 . - 0 ID=cds2902;Parent=gene2976;Dbxref=Genbank:WP_001292460.1;Name=WP_001292460.1;gbkey=CDS;product=pseudouridine-5'-phosphate glycosidase;protein_id=WP_001292460.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3001887 3002828 . - . ID=gene2977;Name=SH03_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14915;old_locus_tag=SH03_14920 NZ_CP010441.1 Protein Homology CDS 3001887 3002828 . - 0 ID=cds2903;Parent=gene2977;Dbxref=Genbank:WP_001208118.1;Name=WP_001208118.1;gbkey=CDS;product=pseudouridine kinase;protein_id=WP_001208118.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3003251 3004942 . - . ID=gene2978;Name=SH03_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14920;old_locus_tag=SH03_14925 NZ_CP010441.1 Protein Homology CDS 3003251 3004942 . - 0 ID=cds2904;Parent=gene2978;Dbxref=Genbank:WP_000854447.1;Name=WP_000854447.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS fructose EIIBC component;protein_id=WP_000854447.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3004959 3005897 . - . ID=gene2979;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=SH03_RS14925;old_locus_tag=SH03_14930 NZ_CP010441.1 Protein Homology CDS 3004959 3005897 . - 0 ID=cds2905;Parent=gene2979;Dbxref=Genbank:WP_000091263.1;Name=WP_000091263.1;Note=converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers;gbkey=CDS;gene=fruK;product=1-phosphofructokinase;protein_id=WP_000091263.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3005897 3007027 . - . ID=gene2980;Name=SH03_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14930;old_locus_tag=SH03_14935 NZ_CP010441.1 Protein Homology CDS 3005897 3007027 . - 0 ID=cds2906;Parent=gene2980;Dbxref=Genbank:WP_000487246.1;Name=WP_000487246.1;Note=phosphoenolpyruvate (PEP)-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HPr which then transfers the phosphoryl group to the IIB component;gbkey=CDS;product=multiphosphoryl transfer protein;protein_id=WP_000487246.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3007395 3008576 . + . ID=gene2981;Name=SH03_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14935;old_locus_tag=SH03_14940 NZ_CP010441.1 Protein Homology CDS 3007395 3008576 . + 0 ID=cds2907;Parent=gene2981;Dbxref=Genbank:WP_038432613.1;Name=WP_038432613.1;gbkey=CDS;product=sugar transporter;protein_id=WP_038432613.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3008573 3008827 . - . ID=gene2982;Name=SH03_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14940;old_locus_tag=SH03_14945 NZ_CP010441.1 Protein Homology CDS 3008573 3008827 . - 0 ID=cds2908;Parent=gene2982;Dbxref=Genbank:WP_000389030.1;Name=WP_000389030.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000389030.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3008982 3009554 . + . ID=gene2983;Name=SH03_RS14945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14945;old_locus_tag=SH03_14950 NZ_CP010441.1 Protein Homology CDS 3008982 3009554 . + 0 ID=cds2909;Parent=gene2983;Dbxref=Genbank:WP_001136827.1;Name=WP_001136827.1;Note=Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro%2C suggesting its involvement in the formation of the first peptide bond of a protein;gbkey=CDS;product=elongation factor P-like protein;protein_id=WP_001136827.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3009777 3011243 . + . ID=gene2984;Name=SH03_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14950;old_locus_tag=SH03_14955 NZ_CP010441.1 Protein Homology CDS 3009777 3011243 . + 0 ID=cds2910;Parent=gene2984;Dbxref=Genbank:WP_001091940.1;Name=WP_001091940.1;gbkey=CDS;product=NAD-dependent D-mannonate oxidoreductase;protein_id=WP_001091940.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3011361 3012347 . + . ID=gene2985;Name=SH03_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14955;old_locus_tag=SH03_14960 NZ_CP010441.1 Protein Homology CDS 3011361 3012347 . + 0 ID=cds2911;Parent=gene2985;Dbxref=Genbank:WP_000198828.1;Name=WP_000198828.1;gbkey=CDS;product=GTPase;protein_id=WP_000198828.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3012386 3013099 . + . ID=gene2986;Name=SH03_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14960;old_locus_tag=SH03_14965 NZ_CP010441.1 Protein Homology CDS 3012386 3013099 . + 0 ID=cds2912;Parent=gene2986;Dbxref=Genbank:WP_000594599.1;Name=WP_000594599.1;gbkey=CDS;product=lipid A 1-diphosphate synthase;protein_id=WP_000594599.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3013511 3014077 . + . ID=gene2987;Name=spr;gbkey=Gene;gene=spr;gene_biotype=protein_coding;gene_synonym=yeiV;locus_tag=SH03_RS14965;old_locus_tag=SH03_14970 NZ_CP010441.1 Protein Homology CDS 3013511 3014077 . + 0 ID=cds2913;Parent=gene2987;Dbxref=Genbank:WP_000241011.1;Name=WP_000241011.1;Note=mutational suppressor of prc thermosensitivity;gbkey=CDS;gene=spr;product=murein DD-endopeptidase MepS/Murein LD-carboxypeptidase;protein_id=WP_000241011.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3014258 3015814 . + . ID=gene2988;Name=SH03_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14970;old_locus_tag=SH03_14975 NZ_CP010441.1 Protein Homology CDS 3014258 3015814 . + 0 ID=cds2914;Parent=gene2988;Dbxref=Genbank:WP_000470560.1;Name=WP_000470560.1;Note=involved in resistance to the phages N4 and lambda;gbkey=CDS;product=protein Rtn;protein_id=WP_000470560.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3015896 3017710 . + . ID=gene2989;Name=SH03_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14975;old_locus_tag=SH03_14980 NZ_CP010441.1 Protein Homology CDS 3015896 3017710 . + 0 ID=cds2915;Parent=gene2989;Dbxref=Genbank:WP_000637046.1;Name=WP_000637046.1;Note=with YejBEF is involved in resistance to microcin C;gbkey=CDS;product=microcin ABC transporter substrate-binding protein;protein_id=WP_000637046.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3017711 3018805 . + . ID=gene2990;Name=SH03_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14980;old_locus_tag=SH03_14985 NZ_CP010441.1 Protein Homology CDS 3017711 3018805 . + 0 ID=cds2916;Parent=gene2990;Dbxref=Genbank:WP_000501604.1;Name=WP_000501604.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;product=ABC transporter permease;protein_id=WP_000501604.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3018805 3019830 . + . ID=gene2991;Name=SH03_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14985;old_locus_tag=SH03_14990 NZ_CP010441.1 Protein Homology CDS 3018805 3019830 . + 0 ID=cds2917;Parent=gene2991;Dbxref=Genbank:WP_000088923.1;Name=WP_000088923.1;Note=part of the microcin C transport system;gbkey=CDS;product=ABC transporter permease;protein_id=WP_000088923.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3019832 3021421 . + . ID=gene2992;Name=SH03_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14990;old_locus_tag=SH03_14995 NZ_CP010441.1 Protein Homology CDS 3019832 3021421 . + 0 ID=cds2918;Parent=gene2992;Dbxref=Genbank:WP_000194927.1;Name=WP_000194927.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;product=microcin C ABC transporter ATPase;protein_id=WP_000194927.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3021425 3021769 . - . ID=gene2993;Name=SH03_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS14995;old_locus_tag=SH03_15000 NZ_CP010441.1 Protein Homology CDS 3021425 3021769 . - 0 ID=cds2919;Parent=gene2993;Dbxref=Genbank:WP_000202798.1;Name=WP_000202798.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000202798.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3022102 3023292 . - . ID=gene2994;Name=SH03_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15000;old_locus_tag=SH03_15005 NZ_CP010441.1 Protein Homology CDS 3022102 3023292 . - 0 ID=cds2920;Parent=gene2994;Dbxref=Genbank:WP_000213361.1;Name=WP_000213361.1;Note=Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance;gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_000213361.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3023320 3024015 . - . ID=gene2995;Name=SH03_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15005;old_locus_tag=SH03_15010 NZ_CP010441.1 Protein Homology CDS 3023320 3024015 . - 0 ID=cds2921;Parent=gene2995;Dbxref=Genbank:WP_001234850.1;Name=WP_001234850.1;Note=catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA;gbkey=CDS;product=ribosomal small subunit pseudouridine synthase A;protein_id=WP_001234850.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3024164 3025924 . + . ID=gene2996;Name=SH03_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15010;old_locus_tag=SH03_15015 NZ_CP010441.1 Protein Homology CDS 3024164 3025924 . + 0 ID=cds2922;Parent=gene2996;Dbxref=Genbank:WP_000578061.1;Name=WP_000578061.1;gbkey=CDS;product=ATP-dependent DNA or RNA helicase;protein_id=WP_000578061.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3026049 3026333 . + . ID=gene2997;Name=SH03_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15015;old_locus_tag=SH03_15020 NZ_CP010441.1 Protein Homology CDS 3026049 3026333 . + 0 ID=cds2923;Parent=gene2997;Dbxref=Genbank:WP_000494183.1;Name=WP_000494183.1;gbkey=CDS;product=50S ribosomal protein L25;protein_id=WP_000494183.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3026472 3027479 . - . ID=gene2998;Name=SH03_RS15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15020;old_locus_tag=SH03_15025 NZ_CP010441.1 Protein Homology CDS 3026472 3027479 . - 0 ID=cds2924;Parent=gene2998;Dbxref=Genbank:WP_000050793.1;Name=WP_000050793.1;gbkey=CDS;product=nucleoid-associated protein;protein_id=WP_000050793.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3027661 3027888 . + . ID=gene2999;Name=SH03_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15025;old_locus_tag=SH03_15030 NZ_CP010441.1 Protein Homology CDS 3027661 3027888 . + 0 ID=cds2925;Parent=gene2999;Dbxref=Genbank:WP_001135667.1;Name=WP_001135667.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001135667.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3027908 3029668 . + . ID=gene3000;Name=SH03_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15030;old_locus_tag=SH03_15035 NZ_CP010441.1 Protein Homology CDS 3027908 3029668 . + 0 ID=cds2926;Parent=gene3000;Dbxref=Genbank:WP_000256203.1;Name=WP_000256203.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000256203.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3029743 3029819 . + . ID=gene3001;Name=SH03_RS15035;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS15035;old_locus_tag=SH03_15040 NZ_CP010441.1 tRNAscan-SE tRNA 3029743 3029819 . + . ID=rna74;Parent=gene3001;anticodon=(pos:3029777..3029779);gbkey=tRNA;product=tRNA-Pro NZ_CP010441.1 tRNAscan-SE exon 3029743 3029819 . + . ID=id166;Parent=rna74;anticodon=(pos:3029777..3029779);gbkey=tRNA;product=tRNA-Pro NZ_CP010441.1 RefSeq gene 3029922 3032432 . - . ID=gene3002;Name=SH03_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15040;old_locus_tag=SH03_15045 NZ_CP010441.1 Protein Homology CDS 3029922 3032432 . - 0 ID=cds2927;Parent=gene3002;Dbxref=Genbank:WP_000168978.1;Name=WP_000168978.1;gbkey=CDS;product=membrane protein;protein_id=WP_000168978.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 3032448 3033645 . + . ID=id167;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 3032597 3033577 . - . ID=gene3003;Name=SH03_RS15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15045;old_locus_tag=SH03_15050 NZ_CP010441.1 Protein Homology CDS 3032597 3033577 . - 0 ID=cds2928;Parent=gene3003;Dbxref=Genbank:WP_000019403.1;Name=WP_000019403.1;gbkey=CDS;product=transposase;protein_id=WP_000019403.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3033743 3034000 . - . ID=gene3004;Name=SH03_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15050;old_locus_tag=SH03_15055 NZ_CP010441.1 Protein Homology CDS 3033743 3034000 . - 0 ID=cds2929;Parent=gene3004;Dbxref=Genbank:WP_001303596.1;Name=WP_001303596.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001303596.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3034032 3034679 . + . ID=gene3005;Name=SH03_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15055;old_locus_tag=SH03_15060 NZ_CP010441.1 Protein Homology CDS 3034032 3034679 . + 0 ID=cds2930;Parent=gene3005;Dbxref=Genbank:WP_001113639.1;Name=WP_001113639.1;Note=nitrate/nitrite response regulator NarP%3B NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems%3B represses expression of other anaerobic genes;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001113639.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3034890 3035942 . - . ID=gene3006;Name=SH03_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15060;old_locus_tag=SH03_15065 NZ_CP010441.1 Protein Homology CDS 3034890 3035942 . - 0 ID=cds2931;Parent=gene3006;Dbxref=Genbank:WP_001211575.1;Name=WP_001211575.1;Note=cytochrome c-type biogenesis protein%3B involved in the attachment of heme to cytochrome c;gbkey=CDS;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_001211575.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3035939 3036496 . - . ID=gene3007;Name=SH03_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15065;old_locus_tag=SH03_15070 NZ_CP010441.1 Protein Homology CDS 3035939 3036496 . - 0 ID=cds2932;Parent=gene3007;Dbxref=Genbank:WP_000824439.1;Name=WP_000824439.1;Note=cytochrome c-type biogenesis thioredoxin%3B involved in the reduction of disulfide bonds to allow heme bonding;gbkey=CDS;product=thiol:disulfide interchange protein DsbE;protein_id=WP_000824439.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3036493 3038436 . - . ID=gene3008;Name=SH03_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15070;old_locus_tag=SH03_15075 NZ_CP010441.1 Protein Homology CDS 3036493 3038436 . - 0 ID=cds2933;Parent=gene3008;Dbxref=Genbank:WP_000982447.1;Name=WP_000982447.1;Note=cytochrome c-type biogenesis protein%3B required for the transfer of heme to apocytochrome c;gbkey=CDS;product=cytochrome c-type biogenesis protein CcmF;protein_id=WP_000982447.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3038433 3038912 . - . ID=gene3009;Name=SH03_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15075;old_locus_tag=SH03_15080 NZ_CP010441.1 Protein Homology CDS 3038433 3038912 . - 0 ID=cds2934;Parent=gene3009;Dbxref=Genbank:WP_001026418.1;Name=WP_001026418.1;Note=CycJ%3B periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes%3B requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome%3B part of the cytochrome c maturation system%3B periplasmic protein anchored to the inner membrane;gbkey=CDS;product=cytochrome c-type biogenesis protein CcmE;protein_id=WP_001026418.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3038909 3039118 . - . ID=gene3010;Name=SH03_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15080;old_locus_tag=SH03_15085 NZ_CP010441.1 Protein Homology CDS 3038909 3039118 . - 0 ID=cds2935;Parent=gene3010;Dbxref=Genbank:WP_000186540.1;Name=WP_000186540.1;Note=is invovled in heme transfer during cytochrome c biogenesis%3B acts to stabilize CcmC and CcmE;gbkey=CDS;product=heme exporter protein D;protein_id=WP_000186540.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3039115 3039852 . - . ID=gene3011;Name=SH03_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15085;old_locus_tag=SH03_15090 NZ_CP010441.1 Protein Homology CDS 3039115 3039852 . - 0 ID=cds2936;Parent=gene3011;Dbxref=Genbank:WP_001295447.1;Name=WP_001295447.1;Note=with CcmABDE is involved in the transport of protoheme IX%3B CcmC is required for heme transfer to CcmE;gbkey=CDS;product=heme exporter protein C;protein_id=WP_001295447.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3039894 3040553 . - . ID=gene3012;Name=SH03_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15090;old_locus_tag=SH03_15095 NZ_CP010441.1 Protein Homology CDS 3039894 3040553 . - 0 ID=cds2937;Parent=gene3012;Dbxref=Genbank:WP_000498849.1;Name=WP_000498849.1;Note=with CcmABCE is involved in the transport of protoheme IX%3B CcmB is required for the release of holoCcmE from CcmC;gbkey=CDS;product=heme ABC transporter permease;protein_id=WP_000498849.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3040553 3041170 . - . ID=gene3013;Name=SH03_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15095;old_locus_tag=SH03_15100 NZ_CP010441.1 Protein Homology CDS 3040553 3041170 . - 0 ID=cds2938;Parent=gene3013;Dbxref=Genbank:WP_000888560.1;Name=WP_000888560.1;gbkey=CDS;product=cytochrome C biogenesis protein CcmA;protein_id=WP_000888560.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3041189 3041791 . - . ID=gene3014;Name=SH03_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15100;old_locus_tag=SH03_15105 NZ_CP010441.1 Protein Homology CDS 3041189 3041791 . - 0 ID=cds2939;Parent=gene3014;Dbxref=Genbank:WP_000528376.1;Name=WP_000528376.1;Note=with NapABDFGH functions as a nitrate reductase%3B NapC functions as an electron shuttle between NapAB and NapGH or quinone;gbkey=CDS;product=cytochrome c-type protein NapC;protein_id=WP_000528376.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3041801 3042250 . - . ID=gene3015;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=SH03_RS15105;old_locus_tag=SH03_15110 NZ_CP010441.1 Protein Homology CDS 3041801 3042250 . - 0 ID=cds2940;Parent=gene3015;Dbxref=Genbank:WP_038432616.1;Name=WP_038432616.1;Note=small subunit of periplasmic nitrate reductase%3B receives electrons from the membrane-bound NapC and passes them to NapA;gbkey=CDS;gene=napB;product=periplasmic nitrate reductase electron transfer subunit;protein_id=WP_038432616.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3042247 3043110 . - . ID=gene3016;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=SH03_RS15110;old_locus_tag=SH03_15115 NZ_CP010441.1 Protein Homology CDS 3042247 3043110 . - 0 ID=cds2941;Parent=gene3016;Dbxref=Genbank:WP_000013515.1;Name=WP_000013515.1;Note=part of NapHG quinol dehydrogenase%3B couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA;gbkey=CDS;gene=napH;product=ferredoxin-type protein NapH;protein_id=WP_000013515.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3043097 3043792 . - . ID=gene3017;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=SH03_RS15115;old_locus_tag=SH03_15120 NZ_CP010441.1 Protein Homology CDS 3043097 3043792 . - 0 ID=cds2942;Parent=gene3017;Dbxref=Genbank:WP_000091291.1;Name=WP_000091291.1;Note=part of NapHG quinol dehydrogenase%3B couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA%3B secreted by twin arginine translocation pathway;gbkey=CDS;gene=napG;product=ferredoxin-type protein NapG;protein_id=WP_000091291.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3043799 3046285 . - . ID=gene3018;Name=SH03_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15120;old_locus_tag=SH03_15125 NZ_CP010441.1 Protein Homology CDS 3043799 3046285 . - 0 ID=cds2943;Parent=gene3018;Dbxref=Genbank:WP_000778061.1;Name=WP_000778061.1;Note=periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC;gbkey=CDS;product=periplasmic nitrate reductase;protein_id=WP_000778061.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3046282 3046545 . - . ID=gene3019;Name=SH03_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15125;old_locus_tag=SH03_15130 NZ_CP010441.1 Protein Homology CDS 3046282 3046545 . - 0 ID=cds2944;Parent=gene3019;Dbxref=Genbank:WP_000557378.1;Name=WP_000557378.1;gbkey=CDS;product=protein NapD;protein_id=WP_000557378.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3046535 3047029 . - . ID=gene3020;Name=SH03_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15130;old_locus_tag=SH03_15135 NZ_CP010441.1 Protein Homology CDS 3046535 3047029 . - 0 ID=cds2945;Parent=gene3020;Dbxref=Genbank:WP_000686723.1;Name=WP_000686723.1;Note=Predicted role in electron transfer to the periplasmic nitrate reductase protein NapA.;gbkey=CDS;product=ferredoxin-type protein NapF;protein_id=WP_000686723.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3047138 3047302 . + . ID=gene3021;Name=SH03_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15135;old_locus_tag=SH03_15140 NZ_CP010441.1 Protein Homology CDS 3047138 3047302 . + 0 ID=cds2946;Parent=gene3021;Dbxref=Genbank:WP_001310984.1;Name=WP_001310984.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001310984.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3047437 3047925 . + . ID=gene3022;Name=SH03_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15140;old_locus_tag=SH03_15145 NZ_CP010441.1 Protein Homology CDS 3047437 3047925 . + 0 ID=cds2947;Parent=gene3022;Dbxref=Genbank:WP_000849209.1;Name=WP_000849209.1;Note=serine protease inhibitor%2C inhibits trypsin and other proteases;gbkey=CDS;product=ecotin;protein_id=WP_000849209.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 3047932 3048597 . + . ID=id168;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 3048640 3050286 . - . ID=gene3023;Name=SH03_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15145;old_locus_tag=SH03_15150 NZ_CP010441.1 Protein Homology CDS 3048640 3050286 . - 0 ID=cds2948;Parent=gene3023;Dbxref=Genbank:WP_000758077.1;Name=WP_000758077.1;gbkey=CDS;product=malate:quinone oxidoreductase;protein_id=WP_000758077.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3050504 3052147 . - . ID=gene3024;Name=SH03_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15150;old_locus_tag=SH03_15155 NZ_CP010441.1 Protein Homology CDS 3050504 3052147 . - 0 ID=cds2949;Parent=gene3024;Dbxref=Genbank:WP_000422182.1;Name=WP_000422182.1;Note=efflux pump for the antibacterial peptide microcin J25;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_000422182.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3052223 3052873 . - . ID=gene3025;Name=SH03_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15155;old_locus_tag=SH03_15160 NZ_CP010441.1 Protein Homology CDS 3052223 3052873 . - 0 ID=cds2950;Parent=gene3025;Dbxref=Genbank:WP_000884971.1;Name=WP_000884971.1;gbkey=CDS;product=alpha-ketoglutarate-dependent dioxygenase AlkB;protein_id=WP_000884971.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3052873 3053937 . - . ID=gene3026;Name=SH03_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15160;old_locus_tag=SH03_15165 NZ_CP010441.1 Protein Homology CDS 3052873 3053937 . - 0 ID=cds2951;Parent=gene3026;Dbxref=Genbank:WP_000710375.1;Name=WP_000710375.1;Note=regulates genes involved in the repair of alkylated DNA%3B repairs DNA containing 6-O-methylguanine;gbkey=CDS;product=bifunctional transcriptional activator/DNA repair enzyme Ada;protein_id=WP_000710375.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3054011 3055066 . - . ID=gene3027;Name=SH03_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15165;old_locus_tag=SH03_15170 NZ_CP010441.1 Protein Homology CDS 3054011 3055066 . - 0 ID=cds2952;Parent=gene3027;Dbxref=Genbank:WP_000406064.1;Name=WP_000406064.1;Note=catalyzes the conversion of aminoimidazole ribotide to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine moiety of thiamine%3B involved in the maintenance and/or assembly of sulfur clusters%3B periplasmic lipoporotein anchored to the inner membrane%3B part of the thiamine pyrophosphate biosynthesis pathway;gbkey=CDS;product=FAD--protein FMN transferase;protein_id=WP_000406064.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3055178 3056281 . - . ID=gene3028;Name=SH03_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15170;old_locus_tag=SH03_15175 NZ_CP010441.1 Protein Homology CDS 3055178 3056281 . - 0 ID=cds2953;Parent=gene3028;Dbxref=Genbank:WP_000865568.1;Name=WP_000865568.1;gbkey=CDS;product=outer membrane protein C;protein_id=WP_000865568.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3056540 3056632 . - . ID=gene3029;Name=SH03_RS15175;end_range=3056632,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS15175;partial=true;pseudo=true NZ_CP010441.1 Protein Homology CDS 3056540 3056632 . - 0 ID=cds2954;Parent=gene3029;end_range=3056632,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=glutamate decarboxylase;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 3056673 3056798 . - . ID=gene3030;Name=SH03_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15180;old_locus_tag=SH03_15185 NZ_CP010441.1 Protein Homology CDS 3056673 3056798 . - 0 ID=cds2955;Parent=gene3030;Dbxref=Genbank:WP_001750461.1;Name=WP_001750461.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001750461.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3057020 3059692 . + . ID=gene3031;Name=SH03_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15185;old_locus_tag=SH03_15190 NZ_CP010441.1 Protein Homology CDS 3057020 3059692 . + 0 ID=cds2956;Parent=gene3031;Dbxref=Genbank:WP_001249081.1;Name=WP_001249081.1;gbkey=CDS;product=phosphotransferase RcsD;protein_id=WP_001249081.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3059709 3060359 . + . ID=gene3032;Name=SH03_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15190;old_locus_tag=SH03_15195 NZ_CP010441.1 Protein Homology CDS 3059709 3060359 . + 0 ID=cds2957;Parent=gene3032;Dbxref=Genbank:WP_001061917.1;Name=WP_001061917.1;Note=two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division%3B probably phosphorylated by RcsC or RcsF;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001061917.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3060559 3063408 . - . ID=gene3033;Name=SH03_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15195;old_locus_tag=SH03_15200 NZ_CP010441.1 Protein Homology CDS 3060559 3063408 . - 0 ID=cds2958;Parent=gene3033;Dbxref=Genbank:WP_038432618.1;Name=WP_038432618.1;gbkey=CDS;product=histidine kinase;protein_id=WP_038432618.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3063575 3065401 . + . ID=gene3034;Name=SH03_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15200;old_locus_tag=SH03_15205 NZ_CP010441.1 Protein Homology CDS 3063575 3065401 . + 0 ID=cds2959;Parent=gene3034;Dbxref=Genbank:WP_000559125.1;Name=WP_000559125.1;Note=with AtoC is a member of a two-component regulatory system involved in the transcriptional regulation of the ato genes for acetoacetate metabolism;gbkey=CDS;product=PAS domain-containing two-component system sensor histidine kinase;protein_id=WP_000559125.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3065398 3066783 . + . ID=gene3035;Name=SH03_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15205;old_locus_tag=SH03_15210 NZ_CP010441.1 Protein Homology CDS 3065398 3066783 . + 0 ID=cds2960;Parent=gene3035;Dbxref=Genbank:WP_000125282.1;Name=WP_000125282.1;Note=DNA-binding response regulator in two-component regulatory system with ZraS%3B response regulator/sigma54 interaction protein;gbkey=CDS;product=acetoacetate metabolism regulatory protein AtoC;protein_id=WP_000125282.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3066979 3067641 . + . ID=gene3036;Name=SH03_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15210;old_locus_tag=SH03_15215 NZ_CP010441.1 Protein Homology CDS 3066979 3067641 . + 0 ID=cds2961;Parent=gene3036;Dbxref=Genbank:WP_000850540.1;Name=WP_000850540.1;gbkey=CDS;product=acetate CoA-transferase subunit alpha;protein_id=WP_000850540.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3067641 3068291 . + . ID=gene3037;Name=SH03_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15215;old_locus_tag=SH03_15220 NZ_CP010441.1 Protein Homology CDS 3067641 3068291 . + 0 ID=cds2962;Parent=gene3037;Dbxref=Genbank:WP_000339065.1;Name=WP_000339065.1;gbkey=CDS;product=acetate CoA-transferase subunit beta;protein_id=WP_000339065.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3068288 3069610 . + . ID=gene3038;Name=SH03_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15220;old_locus_tag=SH03_15225 NZ_CP010441.1 Protein Homology CDS 3068288 3069610 . + 0 ID=cds2963;Parent=gene3038;Dbxref=Genbank:WP_000580275.1;Name=WP_000580275.1;gbkey=CDS;product=short-chain fatty acids transporter;protein_id=WP_000580275.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3069641 3070825 . + . ID=gene3039;Name=SH03_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15225;old_locus_tag=SH03_15230 NZ_CP010441.1 Protein Homology CDS 3069641 3070825 . + 0 ID=cds2964;Parent=gene3039;Dbxref=Genbank:WP_000786547.1;Name=WP_000786547.1;Note=Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase%2C catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation;gbkey=CDS;product=acetyl-CoA acetyltransferase;protein_id=WP_000786547.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3070899 3071675 . - . ID=gene3040;Name=SH03_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15230;old_locus_tag=SH03_15235 NZ_CP010441.1 Protein Homology CDS 3070899 3071675 . - 0 ID=cds2965;Parent=gene3040;Dbxref=Genbank:WP_001225852.1;Name=WP_001225852.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001225852.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3071680 3073329 . - . ID=gene3041;Name=SH03_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15235;old_locus_tag=SH03_15240 NZ_CP010441.1 Protein Homology CDS 3071680 3073329 . - 0 ID=cds2966;Parent=gene3041;Dbxref=Genbank:WP_001104549.1;Name=WP_001104549.1;gbkey=CDS;product=host defense protein;protein_id=WP_001104549.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3073330 3073815 . - . ID=gene3042;Name=SH03_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15240;old_locus_tag=SH03_15245 NZ_CP010441.1 GeneMarkS+ CDS 3073330 3073815 . - 0 ID=cds2967;Parent=gene3042;Dbxref=Genbank:WP_000068669.1;Name=WP_000068669.1;gbkey=CDS;product=alpha-2-macroglobulin;protein_id=WP_000068669.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3073831 3077844 . - . ID=gene3043;Name=SH03_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15245;old_locus_tag=SH03_15250 NZ_CP010441.1 Protein Homology CDS 3073831 3077844 . - 0 ID=cds2968;Parent=gene3043;Dbxref=Genbank:WP_000536562.1;Name=WP_000536562.1;gbkey=CDS;product=membrane protein;protein_id=WP_000536562.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3077868 3078491 . - . ID=gene3044;Name=SH03_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15250;old_locus_tag=SH03_15255 NZ_CP010441.1 Protein Homology CDS 3077868 3078491 . - 0 ID=cds2969;Parent=gene3044;Dbxref=Genbank:WP_001295211.1;Name=WP_001295211.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001295211.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3078488 3080176 . - . ID=gene3045;Name=SH03_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15255;old_locus_tag=SH03_15260 NZ_CP010441.1 Protein Homology CDS 3078488 3080176 . - 0 ID=cds2970;Parent=gene3045;Dbxref=Genbank:WP_000012305.1;Name=WP_000012305.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000012305.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3080325 3082952 . - . ID=gene3046;Name=SH03_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15260;old_locus_tag=SH03_15265 NZ_CP010441.1 Protein Homology CDS 3080325 3082952 . - 0 ID=cds2971;Parent=gene3046;Dbxref=Genbank:WP_046377551.1;Name=WP_046377551.1;gbkey=CDS;product=DNA gyrase subunit A;protein_id=WP_046377551.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3083099 3083821 . + . ID=gene3047;Name=SH03_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15265;old_locus_tag=SH03_15270 NZ_CP010441.1 Protein Homology CDS 3083099 3083821 . + 0 ID=cds2972;Parent=gene3047;Dbxref=Genbank:WP_000990765.1;Name=WP_000990765.1;Note=Involved in ubiquinone biosynthesis;gbkey=CDS;product=ubiquinone biosynthesis O-methyltransferase;protein_id=WP_000990765.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3083949 3087701 . - . ID=gene3048;Name=SH03_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15270;old_locus_tag=SH03_15275 NZ_CP010441.1 Protein Homology CDS 3083949 3087701 . - 0 ID=cds2973;Parent=gene3048;Dbxref=Genbank:WP_001220077.1;Name=WP_001220077.1;gbkey=CDS;product=adhesin;protein_id=WP_001220077.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3088173 3088316 . + . ID=gene3049;Name=SH03_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15275;old_locus_tag=SH03_15280 NZ_CP010441.1 Protein Homology CDS 3088173 3088316 . + 0 ID=cds2974;Parent=gene3049;Dbxref=Genbank:WP_032083391.1;Name=WP_032083391.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032083391.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3088397 3090682 . + . ID=gene3050;Name=SH03_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15280;old_locus_tag=SH03_15285 NZ_CP010441.1 Protein Homology CDS 3088397 3090682 . + 0 ID=cds2975;Parent=gene3050;Dbxref=Genbank:WP_001075164.1;Name=WP_001075164.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;product=ribonucleoside-diphosphate reductase 1 subunit alpha;protein_id=WP_001075164.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3090916 3092046 . + . ID=gene3051;Name=SH03_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15285;old_locus_tag=SH03_15290 NZ_CP010441.1 Protein Homology CDS 3090916 3092046 . + 0 ID=cds2976;Parent=gene3051;Dbxref=Genbank:WP_000332037.1;Name=WP_000332037.1;Note=B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA;gbkey=CDS;product=ribonucleoside-diphosphate reductase 1 subunit beta;protein_id=WP_000332037.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3092046 3092300 . + . ID=gene3052;Name=SH03_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15290;old_locus_tag=SH03_15295 NZ_CP010441.1 Protein Homology CDS 3092046 3092300 . + 0 ID=cds2977;Parent=gene3052;Dbxref=Genbank:WP_000135040.1;Name=WP_000135040.1;Note=plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor%2C essential for nucleotide reduction catalyzed by ribonucleotide reductases;gbkey=CDS;product=ferredoxin involved with ribonucleotide reductase diferric-tyrosyl radical (Y*) cofactor maintenance;protein_id=WP_000135040.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3092354 3093004 . - . ID=gene3053;Name=SH03_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15295;old_locus_tag=SH03_15300 NZ_CP010441.1 Protein Homology CDS 3092354 3093004 . - 0 ID=cds2978;Parent=gene3053;Dbxref=Genbank:WP_000301050.1;Name=WP_000301050.1;gbkey=CDS;product=protein InaA;protein_id=WP_000301050.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3093219 3093425 . + . ID=gene3054;Name=SH03_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15300;old_locus_tag=SH03_15305 NZ_CP010441.1 Protein Homology CDS 3093219 3093425 . + 0 ID=cds2979;Parent=gene3054;Dbxref=Genbank:WP_001009397.1;Name=WP_001009397.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001009397.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3093467 3094543 . - . ID=gene3055;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=SH03_RS15305;old_locus_tag=SH03_15310 NZ_CP010441.1 Protein Homology CDS 3093467 3094543 . - 0 ID=cds2980;Parent=gene3055;Dbxref=Genbank:WP_000779105.1;Name=WP_000779105.1;Note=hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols%3B periplasmic;gbkey=CDS;gene=glpQ;product=glycerophosphoryl diester phosphodiesterase;protein_id=WP_000779105.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3094548 3095906 . - . ID=gene3056;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=SH03_RS15310;old_locus_tag=SH03_15315 NZ_CP010441.1 Protein Homology CDS 3094548 3095906 . - 0 ID=cds2981;Parent=gene3056;Dbxref=Genbank:WP_000948731.1;Name=WP_000948731.1;Note=catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell;gbkey=CDS;gene=glpT;product=glycerol-3-phosphate transporter;protein_id=WP_000948731.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3096179 3097807 . + . ID=gene3057;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=SH03_RS15315;old_locus_tag=SH03_15320 NZ_CP010441.1 Protein Homology CDS 3096179 3097807 . + 0 ID=cds2982;Parent=gene3057;Dbxref=Genbank:WP_000857257.1;Name=WP_000857257.1;Note=anaerobic%2C catalyzes the conversion of glycerol 3-phosphate to dihydroxyacetone using fumarate or nitrate as electron acceptor;gbkey=CDS;gene=glpA;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_000857257.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3097797 3099056 . + . ID=gene3058;Name=SH03_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15320;old_locus_tag=SH03_15325 NZ_CP010441.1 Protein Homology CDS 3097797 3099056 . + 0 ID=cds2983;Parent=gene3058;Dbxref=Genbank:WP_001209927.1;Name=WP_001209927.1;Note=sn-glycerol-3-phosphate dehydrogenase (anaerobic)%3B catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate%3B part of GlpABC complex%3B presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters;gbkey=CDS;product=anaerobic glycerol-3-phosphate dehydrogenase subunit B;protein_id=WP_001209927.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3099053 3100243 . + . ID=gene3059;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=SH03_RS15325;old_locus_tag=SH03_15330 NZ_CP010441.1 Protein Homology CDS 3099053 3100243 . + 0 ID=cds2984;Parent=gene3059;Dbxref=Genbank:WP_001000379.1;Name=WP_001000379.1;Note=anaerobic%3B with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate;gbkey=CDS;gene=glpC;product=anaerobic glycerol-3-phosphate dehydrogenase subunit C;protein_id=WP_001000379.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3100436 3101335 . + . ID=gene3060;Name=SH03_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15330;old_locus_tag=SH03_15335 NZ_CP010441.1 Protein Homology CDS 3100436 3101335 . + 0 ID=cds2985;Parent=gene3060;Dbxref=Genbank:WP_000140592.1;Name=WP_000140592.1;gbkey=CDS;product=transposase;protein_id=WP_000140592.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3101348 3101533 . + . ID=gene3061;Name=SH03_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15335;old_locus_tag=SH03_15340 NZ_CP010441.1 Protein Homology CDS 3101348 3101533 . + 0 ID=cds2986;Parent=gene3061;Dbxref=Genbank:WP_000150333.1;Name=WP_000150333.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000150333.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3101574 3102377 . - . ID=gene3062;Name=SH03_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15340;old_locus_tag=SH03_15345 NZ_CP010441.1 Protein Homology CDS 3101574 3102377 . - 0 ID=cds2987;Parent=gene3062;Dbxref=Genbank:WP_000992954.1;Name=WP_000992954.1;Note=catalyzes the retro-aldol cleavage of 2-keto-3-deoxy-L-rhamnonate to pyruvate and lactaldehyde;gbkey=CDS;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WP_000992954.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3102395 3103684 . - . ID=gene3063;Name=SH03_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15345;old_locus_tag=SH03_15350 NZ_CP010441.1 Protein Homology CDS 3102395 3103684 . - 0 ID=cds2988;Parent=gene3063;Dbxref=Genbank:WP_000100890.1;Name=WP_000100890.1;gbkey=CDS;product=transporter;protein_id=WP_000100890.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3103741 3104945 . - . ID=gene3064;Name=SH03_RS15350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS15350;pseudo=true NZ_CP010441.1 Protein Homology CDS 3103741 3104945 . - 0 ID=cds2989;Parent=gene3064;Note=catalyzes the formation of 2-keto-3-deoxy-L-rhamnonate from L-rhamnonate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=rhamnonate dehydratase;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 3104960 3105742 . - . ID=gene3065;Name=SH03_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15355;old_locus_tag=SH03_15360 NZ_CP010441.1 Protein Homology CDS 3104960 3105742 . - 0 ID=cds2990;Parent=gene3065;Dbxref=Genbank:WP_000894185.1;Name=WP_000894185.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000894185.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3105962 3107164 . - . ID=gene3066;Name=SH03_RS15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15360;old_locus_tag=SH03_15365 NZ_CP010441.1 Protein Homology CDS 3105962 3107164 . - 0 ID=cds2991;Parent=gene3066;Dbxref=Genbank:WP_000921621.1;Name=WP_000921621.1;gbkey=CDS;product=inactive PncC family protein;protein_id=WP_000921621.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3107264 3107806 . - . ID=gene3067;Name=SH03_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15365;old_locus_tag=SH03_15370 NZ_CP010441.1 Protein Homology CDS 3107264 3107806 . - 0 ID=cds2992;Parent=gene3067;Dbxref=Genbank:WP_001300392.1;Name=WP_001300392.1;gbkey=CDS;product=porin;protein_id=WP_001300392.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3108085 3108510 . + . ID=gene3068;Name=SH03_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15370;old_locus_tag=SH03_15375 NZ_CP010441.1 Protein Homology CDS 3108085 3108510 . + 0 ID=cds2993;Parent=gene3068;Dbxref=Genbank:WP_001300564.1;Name=WP_001300564.1;Note=catalyzes the hydrolysis of nucleoside triphosphates;gbkey=CDS;product=nucleoside triphosphatase;protein_id=WP_001300564.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3108549 3109151 . - . ID=gene3069;Name=SH03_RS15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15375;old_locus_tag=SH03_15380 NZ_CP010441.1 Protein Homology CDS 3108549 3109151 . - 0 ID=cds2994;Parent=gene3069;Dbxref=Genbank:WP_000879112.1;Name=WP_000879112.1;Note=catalyzes the of heptose(II) of the outer membrane lipopolysaccharide core;gbkey=CDS;product=LPS core heptose(II)-phosphate phosphatase;protein_id=WP_000879112.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3109459 3110598 . + . ID=gene3070;Name=SH03_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15380;old_locus_tag=SH03_15385 NZ_CP010441.1 Protein Homology CDS 3109459 3110598 . + 0 ID=cds2995;Parent=gene3070;Dbxref=Genbank:WP_001295286.1;Name=WP_001295286.1;Note=catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose;gbkey=CDS;product=UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase;protein_id=WP_001295286.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3110602 3111570 . + . ID=gene3071;Name=SH03_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15385;old_locus_tag=SH03_15390 NZ_CP010441.1 Protein Homology CDS 3110602 3111570 . + 0 ID=cds2996;Parent=gene3071;Dbxref=Genbank:WP_000461657.1;Name=WP_000461657.1;Note=catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate;gbkey=CDS;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_000461657.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3111570 3113552 . + . ID=gene3072;Name=SH03_RS15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15390;old_locus_tag=SH03_15395 NZ_CP010441.1 Protein Homology CDS 3111570 3113552 . + 0 ID=cds2997;Parent=gene3072;Dbxref=Genbank:WP_000860273.1;Name=WP_000860273.1;Note=Bifunctional polymyxin resistance arnA protein%3B catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose%3B active in certain mutant strains;gbkey=CDS;product=bifunctional polymyxin resistance protein ArnA;protein_id=WP_000860273.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3113549 3114439 . + . ID=gene3073;Name=SH03_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15395;old_locus_tag=SH03_15400 NZ_CP010441.1 Protein Homology CDS 3113549 3114439 . + 0 ID=cds2998;Parent=gene3073;Dbxref=Genbank:WP_000169728.1;Name=WP_000169728.1;Note=catalyzes the formation of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol;gbkey=CDS;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD;protein_id=WP_000169728.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3114439 3116091 . + . ID=gene3074;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=SH03_RS15400;old_locus_tag=SH03_15405 NZ_CP010441.1 Protein Homology CDS 3114439 3116091 . + 0 ID=cds2999;Parent=gene3074;Dbxref=Genbank:WP_000844057.1;Name=WP_000844057.1;Note=catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A;gbkey=CDS;gene=arnT;product=undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase;protein_id=WP_000844057.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3116088 3116423 . + . ID=gene3075;Name=SH03_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15405;old_locus_tag=SH03_15410 NZ_CP010441.1 Protein Homology CDS 3116088 3116423 . + 0 ID=cds3000;Parent=gene3075;Dbxref=Genbank:WP_000638031.1;Name=WP_000638031.1;Note=with ArnE is involved in transporting 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from the cytoplasmic face to the periplasmic face of the inner membrane;gbkey=CDS;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000638031.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3116423 3116809 . + . ID=gene3076;Name=SH03_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15410;old_locus_tag=SH03_15415 NZ_CP010441.1 Protein Homology CDS 3116423 3116809 . + 0 ID=cds3001;Parent=gene3076;Dbxref=Genbank:WP_000523880.1;Name=WP_000523880.1;Note=with ArnE is responsible for the transport of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from the cytoplasm to the periplasm;gbkey=CDS;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_000523880.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3116803 3117069 . - . ID=gene3077;Name=SH03_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15415;old_locus_tag=SH03_15420 NZ_CP010441.1 Protein Homology CDS 3116803 3117069 . - 0 ID=cds3002;Parent=gene3077;Dbxref=Genbank:WP_001295285.1;Name=WP_001295285.1;Note=with BasR regulates genes involved in polymyxin resistance;gbkey=CDS;product=signal transduction protein PmrD;protein_id=WP_001295285.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3117179 3118534 . - . ID=gene3078;Name=SH03_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15420;old_locus_tag=SH03_15425 NZ_CP010441.1 Protein Homology CDS 3117179 3118534 . - 0 ID=cds3003;Parent=gene3078;Dbxref=Genbank:WP_000577625.1;Name=WP_000577625.1;gbkey=CDS;product=2-succinylbenzoate--CoA ligase;protein_id=WP_000577625.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3118531 3119493 . - . ID=gene3079;Name=SH03_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15425;old_locus_tag=SH03_15430 NZ_CP010441.1 Protein Homology CDS 3118531 3119493 . - 0 ID=cds3004;Parent=gene3079;Dbxref=Genbank:WP_001255628.1;Name=WP_001255628.1;Note=catalyzes the dehydration of 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate;gbkey=CDS;product=o-succinylbenzoate synthase;protein_id=WP_001255628.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3119493 3120350 . - . ID=gene3080;Name=SH03_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15430;old_locus_tag=SH03_15435 NZ_CP010441.1 Protein Homology CDS 3119493 3120350 . - 0 ID=cds3005;Parent=gene3080;Dbxref=Genbank:WP_000639996.1;Name=WP_000639996.1;Note=catalyzes the formation of 1%2C4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA;gbkey=CDS;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000639996.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3120365 3121123 . - . ID=gene3081;Name=SH03_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15435;old_locus_tag=SH03_15440 NZ_CP010441.1 Protein Homology CDS 3120365 3121123 . - 0 ID=cds3006;Parent=gene3081;Dbxref=Genbank:WP_000600499.1;Name=WP_000600499.1;Note=catalyzes the formation of (1 R%2C6 R)-2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate in menaquinone biosynthesis;gbkey=CDS;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_000600499.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3121120 3122790 . - . ID=gene3082;Name=SH03_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15440;old_locus_tag=SH03_15445 NZ_CP010441.1 Protein Homology CDS 3121120 3122790 . - 0 ID=cds3007;Parent=gene3082;Dbxref=Genbank:WP_001295284.1;Name=WP_001295284.1;Note=SEPHCHC synthase%3B forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis;gbkey=CDS;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase;protein_id=WP_001295284.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3122879 3124174 . - . ID=gene3083;Name=SH03_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15445;old_locus_tag=SH03_15450 NZ_CP010441.1 Protein Homology CDS 3122879 3124174 . - 0 ID=cds3008;Parent=gene3083;Dbxref=Genbank:WP_001191419.1;Name=WP_001191419.1;gbkey=CDS;product=isochorismate synthase MenF;protein_id=WP_001191419.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3124253 3124558 . - . ID=gene3084;Name=SH03_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15450;old_locus_tag=SH03_15455 NZ_CP010441.1 Protein Homology CDS 3124253 3124558 . - 0 ID=cds3009;Parent=gene3084;Dbxref=Genbank:WP_000070621.1;Name=WP_000070621.1;gbkey=CDS;product=protein ElaB;protein_id=WP_000070621.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3124613 3125074 . - . ID=gene3085;Name=SH03_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15455;old_locus_tag=SH03_15460 NZ_CP010441.1 Protein Homology CDS 3124613 3125074 . - 0 ID=cds3010;Parent=gene3085;Dbxref=Genbank:WP_000574091.1;Name=WP_000574091.1;gbkey=CDS;product=protein ElaA;protein_id=WP_000574091.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3125139 3126056 . + . ID=gene3086;Name=SH03_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15460;old_locus_tag=SH03_15465 NZ_CP010441.1 Protein Homology CDS 3125139 3126056 . + 0 ID=cds3011;Parent=gene3086;Dbxref=Genbank:WP_001300687.1;Name=WP_001300687.1;Note=RNase BN%3B member of metallo-beta-lactamase family%3B the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase%3B in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not%3B associates with two zinc ions;gbkey=CDS;product=hypothetical protein;protein_id=WP_001300687.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3126247 3127455 . + . ID=gene3087;Name=SH03_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15465;old_locus_tag=SH03_15470 NZ_CP010441.1 Protein Homology CDS 3126247 3127455 . + 0 ID=cds3012;Parent=gene3087;Dbxref=Genbank:WP_000259207.1;Name=WP_000259207.1;Note=ElaD%3B specific cysteine protease which targets ubiquitin and ubiquitin-like proteins covalently bound to target proteins%3B SseL in Salmonella is required for macrophage killing and virulence%2C and it is secreted by the salmonella pathogenicity island 2 type III secretion system;gbkey=CDS;product=deubiquitinase;protein_id=WP_000259207.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3127526 3129253 . - . ID=gene3088;Name=SH03_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15470;old_locus_tag=SH03_15475 NZ_CP010441.1 Protein Homology CDS 3127526 3129253 . - 0 ID=cds3013;Parent=gene3088;Dbxref=Genbank:WP_001244806.1;Name=WP_001244806.1;gbkey=CDS;product=VWA domain-containing protein;protein_id=WP_001244806.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3129391 3130362 . + . ID=gene3089;Name=SH03_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15475;old_locus_tag=SH03_15480 NZ_CP010441.1 Protein Homology CDS 3129391 3130362 . + 0 ID=cds3014;Parent=gene3089;Dbxref=Genbank:WP_000719999.1;Name=WP_000719999.1;gbkey=CDS;product=M28A family peptidase;protein_id=WP_000719999.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3130465 3130968 . + . ID=gene3090;Name=SH03_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15480;old_locus_tag=SH03_15485 NZ_CP010441.1 Protein Homology CDS 3130465 3130968 . + 0 ID=cds3015;Parent=gene3090;Dbxref=Genbank:WP_000525360.1;Name=WP_000525360.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000525360.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3131241 3131957 . - . ID=gene3091;Name=SH03_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15485;old_locus_tag=SH03_15490 NZ_CP010441.1 Protein Homology CDS 3131241 3131957 . - 0 ID=cds3016;Parent=gene3091;Dbxref=Genbank:WP_000455114.1;Name=WP_000455114.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000455114.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3132166 3132588 . + . ID=gene3092;Name=SH03_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15490;old_locus_tag=SH03_15495 NZ_CP010441.1 Protein Homology CDS 3132166 3132588 . + 0 ID=cds3017;Parent=gene3092;Dbxref=Genbank:WP_000188051.1;Name=WP_000188051.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000188051.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3132647 3133495 . + . ID=gene3093;Name=SH03_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15495;old_locus_tag=SH03_15500 NZ_CP010441.1 Protein Homology CDS 3132647 3133495 . + 0 ID=cds3018;Parent=gene3093;Dbxref=Genbank:WP_000767280.1;Name=WP_000767280.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000767280.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3133579 3135036 . - . ID=gene3094;Name=SH03_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15500;old_locus_tag=SH03_15505 NZ_CP010441.1 Protein Homology CDS 3133579 3135036 . - 0 ID=cds3019;Parent=gene3094;Dbxref=Genbank:WP_000156701.1;Name=WP_000156701.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH-quinone oxidoreductase subunit N;protein_id=WP_000156701.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3135043 3136572 . - . ID=gene3095;Name=SH03_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15505;old_locus_tag=SH03_15510 NZ_CP010441.1 Protein Homology CDS 3135043 3136572 . - 0 ID=cds3020;Parent=gene3095;Dbxref=Genbank:WP_038432621.1;Name=WP_038432621.1;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit M;protein_id=WP_038432621.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3136736 3138577 . - . ID=gene3096;Name=SH03_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15510;old_locus_tag=SH03_15515 NZ_CP010441.1 Protein Homology CDS 3136736 3138577 . - 0 ID=cds3021;Parent=gene3096;Dbxref=Genbank:WP_001056643.1;Name=WP_001056643.1;Note=Catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_001056643.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3138574 3138876 . - . ID=gene3097;Name=SH03_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15515;old_locus_tag=SH03_15520 NZ_CP010441.1 Protein Homology CDS 3138574 3138876 . - 0 ID=cds3022;Parent=gene3097;Dbxref=Genbank:WP_000612644.1;Name=WP_000612644.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit K;protein_id=WP_000612644.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3138873 3139427 . - . ID=gene3098;Name=SH03_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15520;old_locus_tag=SH03_15525 NZ_CP010441.1 Protein Homology CDS 3138873 3139427 . - 0 ID=cds3023;Parent=gene3098;Dbxref=Genbank:WP_000393511.1;Name=WP_000393511.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_000393511.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3139439 3139981 . - . ID=gene3099;Name=SH03_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15525;old_locus_tag=SH03_15530 NZ_CP010441.1 Protein Homology CDS 3139439 3139981 . - 0 ID=cds3024;Parent=gene3099;Dbxref=Genbank:WP_000172749.1;Name=WP_000172749.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit I;protein_id=WP_000172749.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3139996 3140973 . - . ID=gene3100;Name=SH03_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15530;old_locus_tag=SH03_15535 NZ_CP010441.1 Protein Homology CDS 3139996 3140973 . - 0 ID=cds3025;Parent=gene3100;Dbxref=Genbank:WP_000118507.1;Name=WP_000118507.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit H;protein_id=WP_000118507.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3140970 3143696 . - . ID=gene3101;Name=SH03_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15535;old_locus_tag=SH03_15540 NZ_CP010441.1 Protein Homology CDS 3140970 3143696 . - 0 ID=cds3026;Parent=gene3101;Dbxref=Genbank:WP_000190939.1;Name=WP_000190939.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH-quinone oxidoreductase subunit G;protein_id=WP_000190939.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3143749 3145086 . - . ID=gene3102;Name=SH03_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15540;old_locus_tag=SH03_15545 NZ_CP010441.1 Protein Homology CDS 3143749 3145086 . - 0 ID=cds3027;Parent=gene3102;Dbxref=Genbank:WP_000789500.1;Name=WP_000789500.1;Note=part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase;gbkey=CDS;product=NADH-quinone oxidoreductase subunit F;protein_id=WP_000789500.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3145083 3145583 . - . ID=gene3103;Name=SH03_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15545;old_locus_tag=SH03_15550 NZ_CP010441.1 Protein Homology CDS 3145083 3145583 . - 0 ID=cds3028;Parent=gene3103;Dbxref=Genbank:WP_000545042.1;Name=WP_000545042.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH-quinone oxidoreductase subunit E;protein_id=WP_000545042.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3145586 3147376 . - . ID=gene3104;Name=SH03_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15550;old_locus_tag=SH03_15555 NZ_CP010441.1 Protein Homology CDS 3145586 3147376 . - 0 ID=cds3029;Parent=gene3104;Dbxref=Genbank:WP_001384057.1;Name=WP_001384057.1;Note=NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms;gbkey=CDS;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_001384057.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3147482 3148144 . - . ID=gene3105;Name=SH03_RS15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15555;old_locus_tag=SH03_15560 NZ_CP010441.1 Protein Homology CDS 3147482 3148144 . - 0 ID=cds3030;Parent=gene3105;Dbxref=Genbank:WP_000386733.1;Name=WP_000386733.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit B;protein_id=WP_000386733.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3148160 3148603 . - . ID=gene3106;Name=SH03_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15560;old_locus_tag=SH03_15565 NZ_CP010441.1 Protein Homology CDS 3148160 3148603 . - 0 ID=cds3031;Parent=gene3106;Dbxref=Genbank:WP_000062997.1;Name=WP_000062997.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_000062997.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3149234 3150172 . - . ID=gene3107;Name=SH03_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15565;old_locus_tag=SH03_15570 NZ_CP010441.1 Protein Homology CDS 3149234 3150172 . - 0 ID=cds3032;Parent=gene3107;Dbxref=Genbank:WP_000622280.1;Name=WP_000622280.1;Note=involved in the regulation of genes involved in flagella synthesis%2C motility and chemotaxis;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000622280.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3151092 3152309 . + . ID=gene3108;Name=SH03_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15570;old_locus_tag=SH03_15575 NZ_CP010441.1 Protein Homology CDS 3151092 3152309 . + 0 ID=cds3033;Parent=gene3108;Dbxref=Genbank:WP_000074527.1;Name=WP_000074527.1;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;gbkey=CDS;product=glutamate--pyruvate aminotransferase AlaA;protein_id=WP_000074527.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3152393 3152992 . + . ID=gene3109;Name=SH03_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15575;old_locus_tag=SH03_15580 NZ_CP010441.1 Protein Homology CDS 3152393 3152992 . + 0 ID=cds3034;Parent=gene3109;Dbxref=Genbank:WP_000813859.1;Name=WP_000813859.1;gbkey=CDS;product=5'-deoxynucleotidase YfbR;protein_id=WP_000813859.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3153051 3154883 . - . ID=gene3110;Name=SH03_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15580;old_locus_tag=SH03_15585 NZ_CP010441.1 Protein Homology CDS 3153051 3154883 . - 0 ID=cds3035;Parent=gene3110;Dbxref=Genbank:WP_001012899.1;Name=WP_001012899.1;gbkey=CDS;product=transporter;protein_id=WP_001012899.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3154970 3155620 . - . ID=gene3111;Name=SH03_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15585;old_locus_tag=SH03_15590 NZ_CP010441.1 Protein Homology CDS 3154970 3155620 . - 0 ID=cds3036;Parent=gene3111;Dbxref=Genbank:WP_001203392.1;Name=WP_001203392.1;gbkey=CDS;product=sugar phosphatase YfbT;protein_id=WP_001203392.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3155631 3156125 . - . ID=gene3112;Name=SH03_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15590;old_locus_tag=SH03_15595 NZ_CP010441.1 Protein Homology CDS 3155631 3156125 . - 0 ID=cds3037;Parent=gene3112;Dbxref=Genbank:WP_000426124.1;Name=WP_000426124.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000426124.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3156208 3156663 . - . ID=gene3113;Name=SH03_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15595;old_locus_tag=SH03_15600 NZ_CP010441.1 Protein Homology CDS 3156208 3156663 . - 0 ID=cds3038;Parent=gene3113;Dbxref=Genbank:WP_000106627.1;Name=WP_000106627.1;gbkey=CDS;product=membrane protein;protein_id=WP_000106627.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3156732 3156863 . - . ID=gene3114;Name=SH03_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15600;old_locus_tag=SH03_15605 NZ_CP010441.1 Protein Homology CDS 3156732 3156863 . - 0 ID=cds3039;Parent=gene3114;Dbxref=Genbank:WP_001115612.1;Name=WP_001115612.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001115612.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3157001 3158203 . + . ID=gene3115;Name=SH03_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15605;old_locus_tag=SH03_15610 NZ_CP010441.1 Protein Homology CDS 3157001 3158203 . + 0 ID=cds3040;Parent=gene3115;Dbxref=Genbank:WP_000095707.1;Name=WP_000095707.1;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate;gbkey=CDS;product=acetate kinase;protein_id=WP_000095707.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3158278 3160422 . + . ID=gene3116;Name=SH03_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15610;old_locus_tag=SH03_15615 NZ_CP010441.1 Protein Homology CDS 3158278 3160422 . + 0 ID=cds3041;Parent=gene3116;Dbxref=Genbank:WP_000086722.1;Name=WP_000086722.1;Note=catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate;gbkey=CDS;product=phosphate acetyltransferase;protein_id=WP_000086722.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3160612 3162132 . + . ID=gene3117;Name=SH03_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15615;old_locus_tag=SH03_15620 NZ_CP010441.1 Protein Homology CDS 3160612 3162132 . + 0 ID=cds3042;Parent=gene3117;Dbxref=Genbank:WP_001274493.1;Name=WP_001274493.1;gbkey=CDS;product=inner membrane transporter%3B C4-dicarboxylate anaerobic carrier family protein;protein_id=WP_001274493.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3162165 3162707 . - . ID=gene3118;Name=SH03_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15620;old_locus_tag=SH03_15625 NZ_CP010441.1 Protein Homology CDS 3162165 3162707 . - 0 ID=cds3043;Parent=gene3118;Dbxref=Genbank:WP_000437935.1;Name=WP_000437935.1;gbkey=CDS;product=NUDIX hydrolase;protein_id=WP_000437935.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3162765 3163316 . - . ID=gene3119;Name=SH03_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15625;old_locus_tag=SH03_15630 NZ_CP010441.1 Protein Homology CDS 3162765 3163316 . - 0 ID=cds3044;Parent=gene3119;Dbxref=Genbank:WP_000772452.1;Name=WP_000772452.1;gbkey=CDS;product=phosphodiesterase;protein_id=WP_000772452.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3163372 3164016 . - . ID=gene3120;Name=SH03_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15630;old_locus_tag=SH03_15635 NZ_CP010441.1 Protein Homology CDS 3163372 3164016 . - 0 ID=cds3045;Parent=gene3120;Dbxref=Genbank:WP_000042442.1;Name=WP_000042442.1;Note=catalyzes the formation of 2%2C4-dinitrophenyl-S-glutathione from 1-chloro-2%2C4-dinitrobenzene and glutathione;gbkey=CDS;product=glutathione S-transferase;protein_id=WP_000042442.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3164152 3164799 . + . ID=gene3121;Name=SH03_RS15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15635;old_locus_tag=SH03_15640 NZ_CP010441.1 Protein Homology CDS 3164152 3164799 . + 0 ID=cds3046;Parent=gene3121;Dbxref=Genbank:WP_000566471.1;Name=WP_000566471.1;gbkey=CDS;product=disulfide-bond oxidoreductase YfcG;protein_id=WP_000566471.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3164856 3165218 . + . ID=gene3122;Name=folX;gbkey=Gene;gene=folX;gene_biotype=protein_coding;locus_tag=SH03_RS15640;old_locus_tag=SH03_15645 NZ_CP010441.1 Protein Homology CDS 3164856 3165218 . + 0 ID=cds3047;Parent=gene3122;Dbxref=Genbank:WP_000068457.1;Name=WP_000068457.1;Note=catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate;gbkey=CDS;gene=folX;product=D-erythro-7%2C8-dihydroneopterin triphosphate epimerase;protein_id=WP_000068457.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3165239 3166132 . + . ID=gene3123;Name=SH03_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15645;old_locus_tag=SH03_15650 NZ_CP010441.1 Protein Homology CDS 3165239 3166132 . + 0 ID=cds3048;Parent=gene3123;Dbxref=Genbank:WP_001028341.1;Name=WP_001028341.1;gbkey=CDS;product=epimerase;protein_id=WP_001028341.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3166180 3167070 . - . ID=gene3124;Name=SH03_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15650;old_locus_tag=SH03_15655 NZ_CP010441.1 Protein Homology CDS 3166180 3167070 . - 0 ID=cds3049;Parent=gene3124;Dbxref=Genbank:WP_000156149.1;Name=WP_000156149.1;gbkey=CDS;product=transposase;protein_id=WP_000156149.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3167267 3168040 . - . ID=gene3125;Name=SH03_RS15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15655;old_locus_tag=SH03_15660 NZ_CP010441.1 Protein Homology CDS 3167267 3168040 . - 0 ID=cds3050;Parent=gene3125;Dbxref=Genbank:WP_038432623.1;Name=WP_038432623.1;gbkey=CDS;product=histidine transport ATP-binding protein HisP;protein_id=WP_038432623.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3168048 3168764 . - . ID=gene3126;Name=SH03_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15660;old_locus_tag=SH03_15665 NZ_CP010441.1 Protein Homology CDS 3168048 3168764 . - 0 ID=cds3051;Parent=gene3126;Dbxref=Genbank:WP_000569958.1;Name=WP_000569958.1;Note=with HisJPQ is involved in transport of histidine%2C lysine%2C arginine and ornithine;gbkey=CDS;product=histidine ABC transporter permease;protein_id=WP_000569958.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3168761 3169447 . - . ID=gene3127;Name=SH03_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15665;old_locus_tag=SH03_15670 NZ_CP010441.1 Protein Homology CDS 3168761 3169447 . - 0 ID=cds3052;Parent=gene3127;Dbxref=Genbank:WP_000965522.1;Name=WP_000965522.1;Note=with HisJMP is involved in the transport of histidine/lysine/arginine/ornithine;gbkey=CDS;product=histidine ABC transporter permease;protein_id=WP_000965522.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3169537 3170319 . - . ID=gene3128;Name=SH03_RS15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15670;old_locus_tag=SH03_15675 NZ_CP010441.1 Protein Homology CDS 3169537 3170319 . - 0 ID=cds3053;Parent=gene3128;Dbxref=Genbank:WP_000737621.1;Name=WP_000737621.1;Note=with HisPMQ is involved in the transport of histidine;gbkey=CDS;product=histidine-binding periplasmic protein;protein_id=WP_000737621.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3170540 3171322 . - . ID=gene3129;Name=SH03_RS15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15675;old_locus_tag=SH03_15680 NZ_CP010441.1 Protein Homology CDS 3170540 3171322 . - 0 ID=cds3054;Parent=gene3129;Dbxref=Genbank:WP_000748271.1;Name=WP_000748271.1;Note=with HisPMQ is involved in the transport of histidine;gbkey=CDS;product=lysine/arginine/ornithine-binding periplasmic protein;protein_id=WP_000748271.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3171588 3172157 . - . ID=gene3130;Name=SH03_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15680;old_locus_tag=SH03_15685 NZ_CP010441.1 Protein Homology CDS 3171588 3172157 . - 0 ID=cds3055;Parent=gene3130;Dbxref=Genbank:WP_000825700.1;Name=WP_000825700.1;Note=catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase partner protein;protein_id=WP_000825700.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3172252 3173769 . - . ID=gene3131;Name=SH03_RS15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15685;old_locus_tag=SH03_15690 NZ_CP010441.1 Protein Homology CDS 3172252 3173769 . - 0 ID=cds3056;Parent=gene3131;Dbxref=Genbank:WP_000334220.1;Name=WP_000334220.1;Note=Catalyzes first step of the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;product=amidophosphoribosyltransferase;protein_id=WP_000334220.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3173806 3174294 . - . ID=gene3132;Name=SH03_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15690;old_locus_tag=SH03_15695 NZ_CP010441.1 Protein Homology CDS 3173806 3174294 . - 0 ID=cds3057;Parent=gene3132;Dbxref=Genbank:WP_000262111.1;Name=WP_000262111.1;Note=membrane protein required for colicin V production;gbkey=CDS;product=colicin V production protein;protein_id=WP_000262111.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3174553 3175215 . - . ID=gene3133;Name=SH03_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15695;old_locus_tag=SH03_15700 NZ_CP010441.1 Protein Homology CDS 3174553 3175215 . - 0 ID=cds3058;Parent=gene3133;Dbxref=Genbank:WP_000146992.1;Name=WP_000146992.1;gbkey=CDS;product=protein DedD;protein_id=WP_000146992.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3175205 3176473 . - . ID=gene3134;Name=SH03_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15700;old_locus_tag=SH03_15705 NZ_CP010441.1 Protein Homology CDS 3175205 3176473 . - 0 ID=cds3059;Parent=gene3134;Dbxref=Genbank:WP_000584546.1;Name=WP_000584546.1;gbkey=CDS;product=bifunctional protein FolC;protein_id=WP_000584546.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3176543 3177457 . - . ID=gene3135;Name=SH03_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15705;old_locus_tag=SH03_15710 NZ_CP010441.1 Protein Homology CDS 3176543 3177457 . - 0 ID=cds3060;Parent=gene3135;Dbxref=Genbank:WP_000118404.1;Name=WP_000118404.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits;gbkey=CDS;product=acetyl-CoA carboxylase carboxyltransferase subunit beta;protein_id=WP_000118404.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3177613 3178272 . - . ID=gene3136;Name=SH03_RS15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15710;old_locus_tag=SH03_15715 NZ_CP010441.1 Protein Homology CDS 3177613 3178272 . - 0 ID=cds3061;Parent=gene3136;Dbxref=Genbank:WP_000364335.1;Name=WP_000364335.1;gbkey=CDS;product=protein DedA;protein_id=WP_000364335.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3178355 3179167 . - . ID=gene3137;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;gene_synonym=hisT;locus_tag=SH03_RS15715;old_locus_tag=SH03_15720 NZ_CP010441.1 Protein Homology CDS 3178355 3179167 . - 0 ID=cds3062;Parent=gene3137;Dbxref=Genbank:WP_001283586.1;Name=WP_001283586.1;Note=mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability;gbkey=CDS;gene=truA;product=tRNA pseudouridine synthase A;protein_id=WP_001283586.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3179167 3180180 . - . ID=gene3138;Name=SH03_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15720;old_locus_tag=SH03_15725 NZ_CP010441.1 Protein Homology CDS 3179167 3180180 . - 0 ID=cds3063;Parent=gene3138;Dbxref=Genbank:WP_001289167.1;Name=WP_001289167.1;gbkey=CDS;product=USG-1 protein;protein_id=WP_001289167.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3180246 3181382 . - . ID=gene3139;Name=SH03_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15725;old_locus_tag=SH03_15730 NZ_CP010441.1 Protein Homology CDS 3180246 3181382 . - 0 ID=cds3064;Parent=gene3139;Dbxref=Genbank:WP_000699148.1;Name=WP_000699148.1;Note=catalyzes the formation of 3-hydroxy-2-oxo-4-phosphonooxybutanoate from erythronate-4-phosphate;gbkey=CDS;product=erythronate-4-phosphate dehydrogenase;protein_id=WP_000699148.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3181481 3182476 . + . ID=gene3140;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;gene_synonym=div;locus_tag=SH03_RS15730;old_locus_tag=SH03_15735 NZ_CP010441.1 Protein Homology CDS 3181481 3182476 . + 0 ID=cds3065;Parent=gene3140;Dbxref=Genbank:WP_000615834.1;Name=WP_000615834.1;Note=in Salmonella typhimurium Flk regulates flagellar biosynthesis by inhibition of the flagellar-associated type III secretion system%3B lowers secretion levels of the anti-sigma28 factor FlgM to the periplasm%3B inner membrane-anchored protein;gbkey=CDS;gene=flk;product=flagellar regulator flk;protein_id=WP_000615834.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3182473 3183651 . - . ID=gene3141;Name=SH03_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15735;old_locus_tag=SH03_15740 NZ_CP010441.1 Protein Homology CDS 3182473 3183651 . - 0 ID=cds3066;Parent=gene3141;Dbxref=Genbank:WP_000127781.1;Name=WP_000127781.1;gbkey=CDS;product=arabinose efflux transporter;protein_id=WP_000127781.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3183916 3185136 . - . ID=gene3142;Name=SH03_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15740;old_locus_tag=SH03_15745 NZ_CP010441.1 Protein Homology CDS 3183916 3185136 . - 0 ID=cds3067;Parent=gene3142;Dbxref=Genbank:WP_000817178.1;Name=WP_000817178.1;Note=FabB%2C beta-Ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;product=3-oxoacyl-ACP synthase I;protein_id=WP_000817178.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3185295 3187301 . + . ID=gene3143;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;gene_synonym=trmC,yfcK;locus_tag=SH03_RS15745;old_locus_tag=SH03_15750 NZ_CP010441.1 Protein Homology CDS 3185295 3187301 . + 0 ID=cds3068;Parent=gene3143;Dbxref=Genbank:WP_038432625.1;Name=WP_038432625.1;Note=5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme;gbkey=CDS;gene=mnmC;product=tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC;protein_id=WP_038432625.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3187422 3187700 . - . ID=gene3144;Name=SH03_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15750;old_locus_tag=SH03_15755 NZ_CP010441.1 Protein Homology CDS 3187422 3187700 . - 0 ID=cds3069;Parent=gene3144;Dbxref=Genbank:WP_000559764.1;Name=WP_000559764.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000559764.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3187734 3188282 . - . ID=gene3145;Name=SH03_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15755;old_locus_tag=SH03_15760 NZ_CP010441.1 Protein Homology CDS 3187734 3188282 . - 0 ID=cds3070;Parent=gene3145;Dbxref=Genbank:WP_001089222.1;Name=WP_001089222.1;gbkey=CDS;product=elongation factor P hydroxylase;protein_id=WP_001089222.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3188282 3189091 . - . ID=gene3146;Name=SH03_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15760;old_locus_tag=SH03_15765 NZ_CP010441.1 Protein Homology CDS 3188282 3189091 . - 0 ID=cds3071;Parent=gene3146;Dbxref=Genbank:WP_000447361.1;Name=WP_000447361.1;gbkey=CDS;product=membrane protein;protein_id=WP_000447361.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3189091 3189915 . - . ID=gene3147;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=SH03_RS15765;old_locus_tag=SH03_15770 NZ_CP010441.1 Protein Homology CDS 3189091 3189915 . - 0 ID=cds3072;Parent=gene3147;Dbxref=Genbank:WP_001043825.1;Name=WP_001043825.1;Note=D-alanyl-D-alanine endopeptidase%3B functions in hydrolyzing cell wall peptidoglycan%3B similar to LAS metallopeptidases%3B forms a dimer in periplasm;gbkey=CDS;gene=mepA;product=penicillin-insensitive murein endopeptidase;protein_id=WP_001043825.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3189919 3191004 . - . ID=gene3148;Name=SH03_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15770;old_locus_tag=SH03_15775 NZ_CP010441.1 Protein Homology CDS 3189919 3191004 . - 0 ID=cds3073;Parent=gene3148;Dbxref=Genbank:WP_001333535.1;Name=WP_001333535.1;Note=catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis;gbkey=CDS;product=chorismate synthase;protein_id=WP_001333535.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3191039 3191971 . - . ID=gene3149;Name=SH03_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15775;old_locus_tag=SH03_15780 NZ_CP010441.1 Protein Homology CDS 3191039 3191971 . - 0 ID=cds3074;Parent=gene3149;Dbxref=Genbank:WP_001300582.1;Name=WP_001300582.1;Note=involved in methylation of ribosomal protein L3;gbkey=CDS;product=50S ribosomal protein L3 glutamine methyltransferase;protein_id=WP_001300582.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3192137 3192688 . + . ID=gene3150;Name=SH03_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15780;old_locus_tag=SH03_15785 NZ_CP010441.1 Protein Homology CDS 3192137 3192688 . + 0 ID=cds3075;Parent=gene3150;Dbxref=Genbank:WP_038432628.1;Name=WP_038432628.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038432628.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3192759 3193580 . - . ID=gene3151;Name=SH03_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15785;old_locus_tag=SH03_15790 NZ_CP010441.1 Protein Homology CDS 3192759 3193580 . - 0 ID=cds3076;Parent=gene3151;Dbxref=Genbank:WP_000698745.1;Name=WP_000698745.1;gbkey=CDS;product=DUF2544 domain-containing protein;protein_id=WP_000698745.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3193582 3194121 . - . ID=gene3152;Name=SH03_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15790;old_locus_tag=SH03_15795 NZ_CP010441.1 Protein Homology CDS 3193582 3194121 . - 0 ID=cds3077;Parent=gene3152;Dbxref=Genbank:WP_001043398.1;Name=WP_001043398.1;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=WP_001043398.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3194118 3194606 . - . ID=gene3153;Name=SH03_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15795;old_locus_tag=SH03_15800 NZ_CP010441.1 Protein Homology CDS 3194118 3194606 . - 0 ID=cds3078;Parent=gene3153;Dbxref=Genbank:WP_001232541.1;Name=WP_001232541.1;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=WP_001232541.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3194603 3195100 . - . ID=gene3154;Name=SH03_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15800;old_locus_tag=SH03_15805 NZ_CP010441.1 Protein Homology CDS 3194603 3195100 . - 0 ID=cds3079;Parent=gene3154;Dbxref=Genbank:WP_000078516.1;Name=WP_000078516.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000078516.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3195115 3195867 . - . ID=gene3155;Name=SH03_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15805;old_locus_tag=SH03_15810 NZ_CP010441.1 Protein Homology CDS 3195115 3195867 . - 0 ID=cds3080;Parent=gene3155;Dbxref=Genbank:WP_001281606.1;Name=WP_001281606.1;gbkey=CDS;product=fimbrial chaperone;protein_id=WP_001281606.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3195887 3198532 . - . ID=gene3156;Name=SH03_RS15810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS15810;pseudo=true NZ_CP010441.1 Protein Homology CDS 3195887 3198532 . - 0 ID=cds3081;Parent=gene3156;gbkey=CDS;product=fimbrial assembly protein;pseudo=true;transl_except=(pos:complement(3196796..3196798)%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq gene 3198614 3199177 . - . ID=gene3157;Name=SH03_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15815;old_locus_tag=SH03_15820 NZ_CP010441.1 Protein Homology CDS 3198614 3199177 . - 0 ID=cds3082;Parent=gene3157;Dbxref=Genbank:WP_000033316.1;Name=WP_000033316.1;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=WP_000033316.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3199858 3200343 . - . ID=gene3158;Name=SH03_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15820;old_locus_tag=SH03_15825 NZ_CP010441.1 Protein Homology CDS 3199858 3200343 . - 0 ID=cds3083;Parent=gene3158;Dbxref=Genbank:WP_001195819.1;Name=WP_001195819.1;gbkey=CDS;product=phosphohistidine phosphatase;protein_id=WP_001195819.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3200546 3202690 . - . ID=gene3159;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=SH03_RS15825;old_locus_tag=SH03_15830 NZ_CP010441.1 Protein Homology CDS 3200546 3202690 . - 0 ID=cds3084;Parent=gene3159;Dbxref=Genbank:WP_000426176.1;Name=WP_000426176.1;Note=multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI%3B similar to FadA2B2 complex%3B involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate;gbkey=CDS;gene=fadJ;product=fatty acid oxidation complex subunit alpha;protein_id=WP_000426176.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3202690 3204000 . - . ID=gene3160;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=SH03_RS15830;old_locus_tag=SH03_15835 NZ_CP010441.1 Protein Homology CDS 3202690 3204000 . - 0 ID=cds3085;Parent=gene3160;Dbxref=Genbank:WP_000531952.1;Name=WP_000531952.1;Note=FadI%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadJ%3B similar to FadA2B2 complex%3B functions in beta-oxidation of fatty acids during anaerobic growth;gbkey=CDS;gene=fadI;product=3-ketoacyl-CoA thiolase;protein_id=WP_000531952.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3204181 3204465 . - . ID=gene3161;Name=SH03_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15835;old_locus_tag=SH03_15840 NZ_CP010441.1 Protein Homology CDS 3204181 3204465 . - 0 ID=cds3086;Parent=gene3161;Dbxref=Genbank:WP_001296261.1;Name=WP_001296261.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001296261.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3204837 3206177 . + . ID=gene3162;Name=SH03_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15840;old_locus_tag=SH03_15845 NZ_CP010441.1 Protein Homology CDS 3204837 3206177 . + 0 ID=cds3087;Parent=gene3162;Dbxref=Genbank:WP_001295701.1;Name=WP_001295701.1;gbkey=CDS;product=long-chain fatty acid transporter;protein_id=WP_001295701.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3206543 3207601 . + . ID=gene3163;Name=SH03_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15845;old_locus_tag=SH03_15850 NZ_CP010441.1 Protein Homology CDS 3206543 3207601 . + 0 ID=cds3088;Parent=gene3163;Dbxref=Genbank:WP_000937788.1;Name=WP_000937788.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000937788.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3207783 3208538 . - . ID=gene3164;Name=SH03_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15850;old_locus_tag=SH03_15855 NZ_CP010441.1 Protein Homology CDS 3207783 3208538 . - 0 ID=cds3089;Parent=gene3164;Dbxref=Genbank:WP_000776765.1;Name=WP_000776765.1;Note=involved in maintaining OM lipid asymmetry;gbkey=CDS;product=phospholipid-binding lipoprotein;protein_id=WP_000776765.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3208832 3209764 . + . ID=gene3165;Name=SH03_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15855;old_locus_tag=SH03_15860 NZ_CP010441.1 Protein Homology CDS 3208832 3209764 . + 0 ID=cds3090;Parent=gene3165;Dbxref=Genbank:WP_000368140.1;Name=WP_000368140.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000368140.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3209840 3209914 . + . ID=gene3166;Name=SH03_RS15860;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS15860;old_locus_tag=SH03_15865 NZ_CP010441.1 tRNAscan-SE tRNA 3209840 3209914 . + . ID=rna75;Parent=gene3166;anticodon=(pos:3209873..3209875);gbkey=tRNA;product=tRNA-Arg NZ_CP010441.1 tRNAscan-SE exon 3209840 3209914 . + . ID=id169;Parent=rna75;anticodon=(pos:3209873..3209875);gbkey=tRNA;product=tRNA-Arg NZ_CP010441.1 RefSeq gene 3210076 3211233 . + . ID=gene3167;Name=SH03_RS15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15865;old_locus_tag=SH03_15870 NZ_CP010441.1 Protein Homology CDS 3210076 3211233 . + 0 ID=cds3091;Parent=gene3167;Dbxref=Genbank:WP_000958671.1;Name=WP_000958671.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000958671.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3211386 3211748 . + . ID=gene3168;Name=SH03_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15870;old_locus_tag=SH03_15875 NZ_CP010441.1 Protein Homology CDS 3211386 3211748 . + 0 ID=cds3092;Parent=gene3168;Dbxref=Genbank:WP_000915541.1;Name=WP_000915541.1;gbkey=CDS;product=glucose translocase;protein_id=WP_000915541.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3211745 3212665 . + . ID=gene3169;Name=SH03_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15875;old_locus_tag=SH03_15880 NZ_CP010441.1 Protein Homology CDS 3211745 3212665 . + 0 ID=cds3093;Parent=gene3169;Dbxref=Genbank:WP_000703651.1;Name=WP_000703651.1;gbkey=CDS;product=bactoprenol glucosyl transferase;protein_id=WP_000703651.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3212662 3213993 . + . ID=gene3170;Name=SH03_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15880;old_locus_tag=SH03_15885 NZ_CP010441.1 Protein Homology CDS 3212662 3213993 . + 0 ID=cds3094;Parent=gene3170;Dbxref=Genbank:WP_001030215.1;Name=WP_001030215.1;gbkey=CDS;product=serotype-specific glucosyl transferase CPS-53 (KpLE1) prophage;protein_id=WP_001030215.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3214292 3214636 . + . ID=gene3171;Name=SH03_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15885;old_locus_tag=SH03_15890 NZ_CP010441.1 Protein Homology CDS 3214292 3214636 . + 0 ID=cds3095;Parent=gene3171;Dbxref=Genbank:WP_014639037.1;Name=WP_014639037.1;gbkey=CDS;product=tail assembly protein;protein_id=WP_014639037.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3214608 3215048 . - . ID=gene3172;Name=SH03_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15890;old_locus_tag=SH03_15895 NZ_CP010441.1 Protein Homology CDS 3214608 3215048 . - 0 ID=cds3096;Parent=gene3172;Dbxref=Genbank:WP_001106835.1;Name=WP_001106835.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001106835.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3215075 3215710 . - . ID=gene3173;Name=SH03_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15895;old_locus_tag=SH03_15900 NZ_CP010441.1 Protein Homology CDS 3215075 3215710 . - 0 ID=cds3097;Parent=gene3173;Dbxref=Genbank:WP_042405267.1;Name=WP_042405267.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042405267.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3215643 3215918 . - . ID=gene3174;Name=SH03_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15900;old_locus_tag=SH03_15905 NZ_CP010441.1 Protein Homology CDS 3215643 3215918 . - 0 ID=cds3098;Parent=gene3174;Dbxref=Genbank:WP_000066913.1;Name=WP_000066913.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000066913.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3215918 3216406 . - . ID=gene3175;Name=SH03_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15905;old_locus_tag=SH03_15910 NZ_CP010441.1 Protein Homology CDS 3215918 3216406 . - 0 ID=cds3099;Parent=gene3175;Dbxref=Genbank:WP_000054968.1;Name=WP_000054968.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000054968.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3216409 3217165 . - . ID=gene3176;Name=SH03_RS22880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS22880;pseudo=true NZ_CP010441.1 Protein Homology CDS 3216409 3217165 . - 0 ID=cds3100;Parent=gene3176;exception=annotated by transcript or proteomic data;gbkey=CDS;product=replication protein;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 3217136 3217498 . + . ID=gene3177;Name=SH03_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15920;old_locus_tag=SH03_15925 NZ_CP010441.1 Protein Homology CDS 3217136 3217498 . + 0 ID=cds3101;Parent=gene3177;Dbxref=Genbank:WP_000135673.1;Name=WP_000135673.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000135673.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3217564 3218388 . + . ID=gene3178;Name=SH03_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15925;old_locus_tag=SH03_15930 NZ_CP010441.1 Protein Homology CDS 3217564 3218388 . + 0 ID=cds3102;Parent=gene3178;Dbxref=Genbank:WP_000081278.1;Name=WP_000081278.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000081278.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3218516 3219052 . + . ID=gene3179;Name=SH03_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15930;old_locus_tag=SH03_15935 NZ_CP010441.1 Protein Homology CDS 3218516 3219052 . + 0 ID=cds3103;Parent=gene3179;Dbxref=Genbank:WP_000008183.1;Name=WP_000008183.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000008183.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3219043 3219405 . + . ID=gene3180;Name=SH03_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15935;old_locus_tag=SH03_15940 NZ_CP010441.1 Protein Homology CDS 3219043 3219405 . + 0 ID=cds3104;Parent=gene3180;Dbxref=Genbank:WP_001242717.1;Name=WP_001242717.1;gbkey=CDS;product=phage protein;protein_id=WP_001242717.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3219405 3219710 . + . ID=gene3181;Name=SH03_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15940;old_locus_tag=SH03_15945 NZ_CP010441.1 Protein Homology CDS 3219405 3219710 . + 0 ID=cds3105;Parent=gene3181;Dbxref=Genbank:WP_000206809.1;Name=WP_000206809.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000206809.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3219842 3220042 . + . ID=gene3182;Name=SH03_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15945;old_locus_tag=SH03_15950 NZ_CP010441.1 Protein Homology CDS 3219842 3220042 . + 0 ID=cds3106;Parent=gene3182;Dbxref=Genbank:WP_001163428.1;Name=WP_001163428.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001163428.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3220226 3221161 . - . ID=gene3183;Name=SH03_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15950;old_locus_tag=SH03_15955 NZ_CP010441.1 Protein Homology CDS 3220226 3221161 . - 0 ID=cds3107;Parent=gene3183;Dbxref=Genbank:WP_001326971.1;Name=WP_001326971.1;Note=regulates the synthesis and expression of the dsdXA operon and dadA gene;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001326971.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3221379 3222716 . + . ID=gene3184;Name=SH03_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15955;old_locus_tag=SH03_15960 NZ_CP010441.1 Protein Homology CDS 3221379 3222716 . + 0 ID=cds3108;Parent=gene3184;Dbxref=Genbank:WP_000556048.1;Name=WP_000556048.1;gbkey=CDS;product=dsdX permease;protein_id=WP_000556048.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3222734 3224062 . + . ID=gene3185;Name=SH03_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15960;old_locus_tag=SH03_15965 NZ_CP010441.1 Protein Homology CDS 3222734 3224062 . + 0 ID=cds3109;Parent=gene3185;Dbxref=Genbank:WP_000426427.1;Name=WP_000426427.1;Note=catalyzes the formation of pyruvate from serine;gbkey=CDS;product=d-serine dehydratase;protein_id=WP_000426427.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3224170 3225708 . - . ID=gene3186;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=SH03_RS15965;old_locus_tag=SH03_15970 NZ_CP010441.1 Protein Homology CDS 3224170 3225708 . - 0 ID=cds3110;Parent=gene3186;Dbxref=Genbank:WP_001018714.1;Name=WP_001018714.1;Note=multidrug MFS transporte%3B with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid;gbkey=CDS;gene=emrB;product=multidrug resistance protein EmrY;protein_id=WP_001018714.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3225708 3226871 . - . ID=gene3187;Name=SH03_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15970;old_locus_tag=SH03_15975 NZ_CP010441.1 Protein Homology CDS 3225708 3226871 . - 0 ID=cds3111;Parent=gene3187;Dbxref=Genbank:WP_000435167.1;Name=WP_000435167.1;Note=with ErmA and TolC forms a multidrug efflux system;gbkey=CDS;product=multidrug resistance protein EmrK;protein_id=WP_000435167.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3227287 3227901 . + . ID=gene3188;Name=SH03_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15975;old_locus_tag=SH03_15980 NZ_CP010441.1 Protein Homology CDS 3227287 3227901 . + 0 ID=cds3112;Parent=gene3188;Dbxref=Genbank:WP_000991370.1;Name=WP_000991370.1;Note=response regulator in two-component regulatory system with EvgS%3B phosphorylated EvgA activates ompC%2C emrKY%2C gadABC%2C hdeAB and others genes%3B involved in acid resistance%2C osmotic adaption%2C and drug resistance;gbkey=CDS;product=positive transcription regulator EvgA;protein_id=WP_000991370.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3228116 3231499 . + . ID=gene3189;Name=SH03_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15980;old_locus_tag=SH03_15985 NZ_CP010441.1 Protein Homology CDS 3228116 3231499 . + 0 ID=cds3113;Parent=gene3189;Dbxref=Genbank:WP_001311012.1;Name=WP_001311012.1;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_001311012.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3231555 3232700 . - . ID=gene3190;Name=SH03_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15985;old_locus_tag=SH03_15990 NZ_CP010441.1 Protein Homology CDS 3231555 3232700 . - 0 ID=cds3114;Parent=gene3190;Dbxref=Genbank:WP_001296867.1;Name=WP_001296867.1;gbkey=CDS;product=acetyl-CoA--oxalate CoA-transferase;protein_id=WP_001296867.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3232774 3233718 . - . ID=gene3191;Name=SH03_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15990;old_locus_tag=SH03_15995 NZ_CP010441.1 Protein Homology CDS 3232774 3233718 . - 0 ID=cds3115;Parent=gene3191;Dbxref=Genbank:WP_000955028.1;Name=WP_000955028.1;Note=member of the AEC family of auxin efflux transporters%3B unknown function;gbkey=CDS;product=transporter;protein_id=WP_000955028.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3233788 3235482 . - . ID=gene3192;Name=SH03_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS15995;old_locus_tag=SH03_16000 NZ_CP010441.1 Protein Homology CDS 3233788 3235482 . - 0 ID=cds3116;Parent=gene3192;Dbxref=Genbank:WP_001283490.1;Name=WP_001283490.1;Note=catalyzes the formation of formyl-CoA from oxalyl-CoA;gbkey=CDS;product=oxalyl-CoA decarboxylase;protein_id=WP_001283490.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3235536 3236786 . - . ID=gene3193;Name=SH03_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16000;old_locus_tag=SH03_16005 NZ_CP010441.1 Protein Homology CDS 3235536 3236786 . - 0 ID=cds3117;Parent=gene3193;Dbxref=Genbank:WP_000106759.1;Name=WP_000106759.1;Note=catalyzes the formation of oxalyl-CoA from oxalate and Formyl-CoA;gbkey=CDS;product=formyl-CoA--oxalate CoA-transferase;protein_id=WP_000106759.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3237299 3237934 . - . ID=gene3194;Name=SH03_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16005;old_locus_tag=SH03_16010 NZ_CP010441.1 Protein Homology CDS 3237299 3237934 . - 0 ID=cds3118;Parent=gene3194;Dbxref=Genbank:WP_000825600.1;Name=WP_000825600.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000825600.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3238230 3238505 . + . ID=gene3195;Name=SH03_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16010;old_locus_tag=SH03_16015 NZ_CP010441.1 Protein Homology CDS 3238230 3238505 . + 0 ID=cds3119;Parent=gene3195;Dbxref=Genbank:WP_000867631.1;Name=WP_000867631.1;gbkey=CDS;product=lipoprotein involved in colanic acid biosynthesis;protein_id=WP_000867631.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3238490 3238627 . - . ID=gene3196;Name=SH03_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16015;old_locus_tag=SH03_16020 NZ_CP010441.1 Protein Homology CDS 3238490 3238627 . - 0 ID=cds3120;Parent=gene3196;Dbxref=Genbank:WP_032083119.1;Name=WP_032083119.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032083119.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3238582 3238824 . - . ID=gene3197;Name=SH03_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16020;old_locus_tag=SH03_16025 NZ_CP010441.1 Protein Homology CDS 3238582 3238824 . - 0 ID=cds3121;Parent=gene3197;Dbxref=Genbank:WP_000609275.1;Name=WP_000609275.1;gbkey=CDS;product=DUF2545 domain-containing protein;protein_id=WP_000609275.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3239177 3240097 . + . ID=gene3198;Name=SH03_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16025;old_locus_tag=SH03_16030 NZ_CP010441.1 Protein Homology CDS 3239177 3240097 . + 0 ID=cds3122;Parent=gene3198;Dbxref=Genbank:WP_000484404.1;Name=WP_000484404.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock;gbkey=CDS;product=lipid A biosynthesis palmitoleoyltransferase;protein_id=WP_000484404.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3240589 3241827 . - . ID=gene3199;Name=SH03_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16030;old_locus_tag=SH03_16035 NZ_CP010441.1 Protein Homology CDS 3240589 3241827 . - 0 ID=cds3123;Parent=gene3199;Dbxref=Genbank:WP_000785931.1;Name=WP_000785931.1;gbkey=CDS;product=glutamate--pyruvate aminotransferase AlaC;protein_id=WP_000785931.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3242203 3243900 . + . ID=gene3200;Name=SH03_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16035;old_locus_tag=SH03_16040 NZ_CP010441.1 Protein Homology CDS 3242203 3243900 . + 0 ID=cds3124;Parent=gene3200;Dbxref=Genbank:WP_000544359.1;Name=WP_000544359.1;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_000544359.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3243915 3244649 . + . ID=gene3201;Name=SH03_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16040;old_locus_tag=SH03_16045 NZ_CP010441.1 Protein Homology CDS 3243915 3244649 . + 0 ID=cds3125;Parent=gene3201;Dbxref=Genbank:WP_001295458.1;Name=WP_001295458.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_001295458.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3244662 3245519 . + . ID=gene3202;Name=SH03_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16045;old_locus_tag=SH03_16050 NZ_CP010441.1 Protein Homology CDS 3244662 3245519 . + 0 ID=cds3126;Parent=gene3202;Dbxref=Genbank:WP_000646835.1;Name=WP_000646835.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_000646835.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3245522 3248017 . - . ID=gene3203;Name=SH03_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16050;old_locus_tag=SH03_16055 NZ_CP010441.1 Protein Homology CDS 3245522 3248017 . - 0 ID=cds3127;Parent=gene3203;Dbxref=Genbank:WP_000955906.1;Name=WP_000955906.1;gbkey=CDS;product=multiphosphoryl transfer protein 1;protein_id=WP_000955906.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3248042 3249079 . - . ID=gene3204;Name=SH03_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16055;old_locus_tag=SH03_16060 NZ_CP010441.1 Protein Homology CDS 3248042 3249079 . - 0 ID=cds3128;Parent=gene3204;Dbxref=Genbank:WP_000366028.1;Name=WP_000366028.1;Note=metalloprotein;gbkey=CDS;product=aminopeptidase YpdE;protein_id=WP_000366028.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3249079 3250164 . - . ID=gene3205;Name=SH03_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16060;old_locus_tag=SH03_16065 NZ_CP010441.1 Protein Homology CDS 3249079 3250164 . - 0 ID=cds3129;Parent=gene3205;Dbxref=Genbank:WP_000173288.1;Name=WP_000173288.1;Note=Xaa-Pro aminopeptidase%3B limited methionine aminopeptidase;gbkey=CDS;product=aminopeptidase YpdF;protein_id=WP_000173288.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3250179 3251426 . - . ID=gene3206;Name=SH03_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16065;old_locus_tag=SH03_16070 NZ_CP010441.1 Protein Homology CDS 3250179 3251426 . - 0 ID=cds3130;Parent=gene3206;Dbxref=Genbank:WP_000985359.1;Name=WP_000985359.1;gbkey=CDS;product=Fructose-like permease IIC component 1;protein_id=WP_000985359.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3251448 3251774 . - . ID=gene3207;Name=SH03_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16070;old_locus_tag=SH03_16075 NZ_CP010441.1 Protein Homology CDS 3251448 3251774 . - 0 ID=cds3131;Parent=gene3207;Dbxref=Genbank:WP_000038456.1;Name=WP_000038456.1;gbkey=CDS;product=fructose-like phosphotransferase enzyme IIB component 1;protein_id=WP_000038456.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3251993 3252958 . - . ID=gene3208;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=SH03_RS16075;old_locus_tag=SH03_16080 NZ_CP010441.1 Protein Homology CDS 3251993 3252958 . - 0 ID=cds3132;Parent=gene3208;Dbxref=Genbank:WP_000170346.1;Name=WP_000170346.1;Note=catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate;gbkey=CDS;gene=glk;product=glucokinase;protein_id=WP_000170346.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3253162 3254418 . + . ID=gene3209;Name=SH03_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16080;old_locus_tag=SH03_16085 NZ_CP010441.1 Protein Homology CDS 3253162 3254418 . + 0 ID=cds3133;Parent=gene3209;Dbxref=Genbank:WP_000903146.1;Name=WP_000903146.1;gbkey=CDS;product=ion channel protein;protein_id=WP_000903146.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3254533 3254859 . + . ID=gene3210;Name=SH03_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16085;old_locus_tag=SH03_16090 NZ_CP010441.1 Protein Homology CDS 3254533 3254859 . + 0 ID=cds3134;Parent=gene3210;Dbxref=Genbank:WP_000490072.1;Name=WP_000490072.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000490072.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3254780 3254941 . + . ID=gene3211;Name=SH03_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16090 NZ_CP010441.1 Protein Homology CDS 3254780 3254941 . + 0 ID=cds3135;Parent=gene3211;Dbxref=Genbank:WP_042004693.1;Name=WP_042004693.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042004693.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3255000 3256238 . - . ID=gene3212;Name=SH03_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16095;old_locus_tag=SH03_16100 NZ_CP010441.1 Protein Homology CDS 3255000 3256238 . - 0 ID=cds3136;Parent=gene3212;Dbxref=Genbank:WP_000186369.1;Name=WP_000186369.1;gbkey=CDS;product=divalent metal cation transporter MntH;protein_id=WP_000186369.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3256574 3257776 . + . ID=gene3213;Name=SH03_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16100;old_locus_tag=SH03_16105 NZ_CP010441.1 Protein Homology CDS 3256574 3257776 . + 0 ID=cds3137;Parent=gene3213;Dbxref=Genbank:WP_000376337.1;Name=WP_000376337.1;gbkey=CDS;product=nucleoside permease NupC;protein_id=WP_000376337.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 3257805 3259150 . + . ID=id170;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 3257863 3258975 . + . ID=gene3214;Name=SH03_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16105;old_locus_tag=SH03_16110 NZ_CP010441.1 Protein Homology CDS 3257863 3258975 . + 0 ID=cds3138;Parent=gene3214;Dbxref=Genbank:WP_001300563.1;Name=WP_001300563.1;gbkey=CDS;product=transposase;protein_id=WP_001300563.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3259175 3261364 . - . ID=gene3215;Name=SH03_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16110;old_locus_tag=SH03_16115 NZ_CP010441.1 Protein Homology CDS 3259175 3261364 . - 0 ID=cds3139;Parent=gene3215;Dbxref=Genbank:WP_000497400.1;Name=WP_000497400.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_000497400.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3261573 3261648 . - . ID=gene3216;Name=SH03_RS16115;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS16115;old_locus_tag=SH03_16120 NZ_CP010441.1 tRNAscan-SE tRNA 3261573 3261648 . - . ID=rna76;Parent=gene3216;anticodon=(pos:complement(3261613..3261615));gbkey=tRNA;product=tRNA-Ala NZ_CP010441.1 tRNAscan-SE exon 3261573 3261648 . - . ID=id171;Parent=rna76;anticodon=(pos:complement(3261613..3261615));gbkey=tRNA;product=tRNA-Ala NZ_CP010441.1 RefSeq gene 3261688 3261763 . - . ID=gene3217;Name=SH03_RS16120;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS16120;old_locus_tag=SH03_16125 NZ_CP010441.1 tRNAscan-SE tRNA 3261688 3261763 . - . ID=rna77;Parent=gene3217;anticodon=(pos:complement(3261728..3261730));gbkey=tRNA;product=tRNA-Ala NZ_CP010441.1 tRNAscan-SE exon 3261688 3261763 . - . ID=id172;Parent=rna77;anticodon=(pos:complement(3261728..3261730));gbkey=tRNA;product=tRNA-Ala NZ_CP010441.1 RefSeq gene 3261999 3262343 . + . ID=gene3218;Name=SH03_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16125;old_locus_tag=SH03_16130 NZ_CP010441.1 Protein Homology CDS 3261999 3262343 . + 0 ID=cds3140;Parent=gene3218;Dbxref=Genbank:WP_001296278.1;Name=WP_001296278.1;gbkey=CDS;product=DUF1323 family DNA-binding protein;protein_id=WP_001296278.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3262345 3262737 . + . ID=gene3219;Name=SH03_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16130;old_locus_tag=SH03_16135 NZ_CP010441.1 Protein Homology CDS 3262345 3262737 . + 0 ID=cds3141;Parent=gene3219;Dbxref=Genbank:WP_000826503.1;Name=WP_000826503.1;gbkey=CDS;product=DUF1323 family DNA-binding protein;protein_id=WP_000826503.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3262789 3264204 . - . ID=gene3220;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=SH03_RS16135;old_locus_tag=SH03_16140 NZ_CP010441.1 Protein Homology CDS 3262789 3264204 . - 0 ID=cds3142;Parent=gene3220;Dbxref=Genbank:WP_000695655.1;Name=WP_000695655.1;Note=catalyzes a two-step reaction%2C first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes;gbkey=CDS;gene=gltX;product=glutamate--tRNA ligase;protein_id=WP_000695655.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3264463 3264538 . + . ID=gene3221;Name=SH03_RS16140;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS16140;old_locus_tag=SH03_16145 NZ_CP010441.1 tRNAscan-SE tRNA 3264463 3264538 . + . ID=rna78;Parent=gene3221;anticodon=(pos:3264496..3264498);gbkey=tRNA;product=tRNA-Val NZ_CP010441.1 tRNAscan-SE exon 3264463 3264538 . + . ID=id173;Parent=rna78;anticodon=(pos:3264496..3264498);gbkey=tRNA;product=tRNA-Val NZ_CP010441.1 RefSeq gene 3264583 3264658 . + . ID=gene3222;Name=SH03_RS16145;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS16145;old_locus_tag=SH03_16150 NZ_CP010441.1 tRNAscan-SE tRNA 3264583 3264658 . + . ID=rna79;Parent=gene3222;anticodon=(pos:3264616..3264618);gbkey=tRNA;product=tRNA-Val NZ_CP010441.1 tRNAscan-SE exon 3264583 3264658 . + . ID=id174;Parent=rna79;anticodon=(pos:3264616..3264618);gbkey=tRNA;product=tRNA-Val NZ_CP010441.1 RefSeq repeat_region 3264705 3265052 . + . ID=id175;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 3264705 3264780 . + . ID=gene3223;Name=SH03_RS16150;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS16150;old_locus_tag=SH03_16155 NZ_CP010441.1 tRNAscan-SE tRNA 3264705 3264780 . + . ID=rna80;Parent=gene3223;anticodon=(pos:3264738..3264740);gbkey=tRNA;product=tRNA-Val NZ_CP010441.1 tRNAscan-SE exon 3264705 3264780 . + . ID=id176;Parent=rna80;anticodon=(pos:3264738..3264740);gbkey=tRNA;product=tRNA-Val NZ_CP010441.1 RefSeq gene 3264785 3264860 . + . ID=gene3224;Name=SH03_RS16155;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS16155;old_locus_tag=SH03_16160 NZ_CP010441.1 tRNAscan-SE tRNA 3264785 3264860 . + . ID=rna81;Parent=gene3224;anticodon=(pos:3264818..3264820);gbkey=tRNA;product=tRNA-Lys NZ_CP010441.1 tRNAscan-SE exon 3264785 3264860 . + . ID=id177;Parent=rna81;anticodon=(pos:3264818..3264820);gbkey=tRNA;product=tRNA-Lys NZ_CP010441.1 RefSeq gene 3265125 3266009 . - . ID=gene3225;Name=SH03_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16160;old_locus_tag=SH03_16165 NZ_CP010441.1 Protein Homology CDS 3265125 3266009 . - 0 ID=cds3143;Parent=gene3225;Dbxref=Genbank:WP_000442949.1;Name=WP_000442949.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000442949.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3266050 3266208 . - . ID=gene3226;Name=SH03_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16165;old_locus_tag=SH03_16170 NZ_CP010441.1 Protein Homology CDS 3266050 3266208 . - 0 ID=cds3144;Parent=gene3226;Dbxref=Genbank:WP_000651752.1;Name=WP_000651752.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000651752.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3266261 3267517 . - . ID=gene3227;Name=SH03_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16170;old_locus_tag=SH03_16175 NZ_CP010441.1 Protein Homology CDS 3266261 3267517 . - 0 ID=cds3145;Parent=gene3227;Dbxref=Genbank:WP_000020402.1;Name=WP_000020402.1;gbkey=CDS;product=xanthosine permease;protein_id=WP_000020402.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3267577 3268410 . - . ID=gene3228;Name=SH03_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16175;old_locus_tag=SH03_16180 NZ_CP010441.1 Protein Homology CDS 3267577 3268410 . - 0 ID=cds3146;Parent=gene3228;Dbxref=Genbank:WP_000084573.1;Name=WP_000084573.1;gbkey=CDS;product=purine nucleoside phosphorylase;protein_id=WP_000084573.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3268659 3269423 . + . ID=gene3229;Name=SH03_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16180;old_locus_tag=SH03_16185 NZ_CP010441.1 Protein Homology CDS 3268659 3269423 . + 0 ID=cds3147;Parent=gene3229;Dbxref=Genbank:WP_000716421.1;Name=WP_000716421.1;gbkey=CDS;product=outer membrane protein;protein_id=WP_000716421.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3269462 3270388 . - . ID=gene3230;Name=SH03_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16185;old_locus_tag=SH03_16190 NZ_CP010441.1 Protein Homology CDS 3269462 3270388 . - 0 ID=cds3148;Parent=gene3230;Dbxref=Genbank:WP_001109794.1;Name=WP_001109794.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_001109794.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3270478 3271476 . + . ID=gene3231;Name=SH03_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16190;old_locus_tag=SH03_16195 NZ_CP010441.1 Protein Homology CDS 3270478 3271476 . + 0 ID=cds3149;Parent=gene3231;Dbxref=Genbank:WP_000765610.1;Name=WP_000765610.1;gbkey=CDS;product=inorganic ion transporter;protein_id=WP_000765610.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3271473 3271691 . - . ID=gene3232;Name=SH03_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16195;old_locus_tag=SH03_16200 NZ_CP010441.1 Protein Homology CDS 3271473 3271691 . - 0 ID=cds3150;Parent=gene3232;Dbxref=Genbank:WP_000410201.1;Name=WP_000410201.1;gbkey=CDS;product=DUF3820 domain-containing protein;protein_id=WP_000410201.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3271693 3273708 . - . ID=gene3233;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=SH03_RS16200;old_locus_tag=SH03_16205 NZ_CP010441.1 Protein Homology CDS 3271693 3273708 . - 0 ID=cds3151;Parent=gene3233;Dbxref=Genbank:WP_000443661.1;Name=WP_000443661.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;gbkey=CDS;gene=ligA;product=DNA ligase;protein_id=WP_000443661.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3273779 3274765 . - . ID=gene3234;Name=SH03_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16205;old_locus_tag=SH03_16210 NZ_CP010441.1 Protein Homology CDS 3273779 3274765 . - 0 ID=cds3152;Parent=gene3234;Dbxref=Genbank:WP_001300494.1;Name=WP_001300494.1;Note=interacts with cell division protein FitsZ and may be required to anchor septal ring structure;gbkey=CDS;product=FtsZ stabilizer;protein_id=WP_001300494.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3274995 3275756 . + . ID=gene3235;Name=SH03_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16210;old_locus_tag=SH03_16215 NZ_CP010441.1 Protein Homology CDS 3274995 3275756 . + 0 ID=cds3153;Parent=gene3235;Dbxref=Genbank:WP_000254839.1;Name=WP_000254839.1;gbkey=CDS;product=sulfate transporter CysZ;protein_id=WP_000254839.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3275941 3276912 . + . ID=gene3236;Name=SH03_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16215;old_locus_tag=SH03_16220 NZ_CP010441.1 Protein Homology CDS 3275941 3276912 . + 0 ID=cds3154;Parent=gene3236;Dbxref=Genbank:WP_000034402.1;Name=WP_000034402.1;gbkey=CDS;product=cysteine synthase A;protein_id=WP_000034402.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3277296 3277553 . + . ID=gene3237;Name=SH03_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16220;old_locus_tag=SH03_16225 NZ_CP010441.1 Protein Homology CDS 3277296 3277553 . + 0 ID=cds3155;Parent=gene3237;Dbxref=Genbank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;product=phosphocarrier protein HPr;protein_id=WP_000487600.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3277598 3279325 . + . ID=gene3238;Name=SH03_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16225;old_locus_tag=SH03_16230 NZ_CP010441.1 Protein Homology CDS 3277598 3279325 . + 0 ID=cds3156;Parent=gene3238;Dbxref=Genbank:WP_000623140.1;Name=WP_000623140.1;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system;gbkey=CDS;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=WP_000623140.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3279366 3279875 . + . ID=gene3239;Name=SH03_RS16230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16230;old_locus_tag=SH03_16235 NZ_CP010441.1 Protein Homology CDS 3279366 3279875 . + 0 ID=cds3157;Parent=gene3239;Dbxref=Genbank:WP_000522247.1;Name=WP_000522247.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=glucose-specific phosphotransferase enzyme IIA component;protein_id=WP_000522247.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3279918 3280769 . - . ID=gene3240;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;locus_tag=SH03_RS16235;old_locus_tag=SH03_16240 NZ_CP010441.1 Protein Homology CDS 3279918 3280769 . - 0 ID=cds3158;Parent=gene3240;Dbxref=Genbank:WP_000096674.1;Name=WP_000096674.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal;gbkey=CDS;gene=pdxK;product=pyridoxine kinase;protein_id=WP_000096674.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3280874 3281248 . + . ID=gene3241;Name=SH03_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16240;old_locus_tag=SH03_16245 NZ_CP010441.1 Protein Homology CDS 3280874 3281248 . + 0 ID=cds3159;Parent=gene3241;Dbxref=Genbank:WP_000719962.1;Name=WP_000719962.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000719962.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3281281 3282015 . + . ID=gene3242;Name=SH03_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16245;old_locus_tag=SH03_16250 NZ_CP010441.1 Protein Homology CDS 3281281 3282015 . + 0 ID=cds3160;Parent=gene3242;Dbxref=Genbank:WP_000745534.1;Name=WP_000745534.1;gbkey=CDS;product=WGR domain protein;protein_id=WP_000745534.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3282204 3283115 . - . ID=gene3243;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=SH03_RS16250;old_locus_tag=SH03_16255 NZ_CP010441.1 Protein Homology CDS 3282204 3283115 . - 0 ID=cds3161;Parent=gene3243;Dbxref=Genbank:WP_001336044.1;Name=WP_001336044.1;Note=catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide;gbkey=CDS;gene=cysM;product=cysteine synthase B;protein_id=WP_001336044.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3283249 3284346 . - . ID=gene3244;Name=SH03_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16255;old_locus_tag=SH03_16260 NZ_CP010441.1 Protein Homology CDS 3283249 3284346 . - 0 ID=cds3162;Parent=gene3244;Dbxref=Genbank:WP_000021036.1;Name=WP_000021036.1;gbkey=CDS;product=sulfate/thiosulfate import ATP-binding protein CysA;protein_id=WP_000021036.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3284336 3285211 . - . ID=gene3245;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=SH03_RS16260;old_locus_tag=SH03_16265 NZ_CP010441.1 Protein Homology CDS 3284336 3285211 . - 0 ID=cds3163;Parent=gene3245;Dbxref=Genbank:WP_000852686.1;Name=WP_000852686.1;Note=Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import;gbkey=CDS;gene=cysW;product=sulfate ABC transporter permease;protein_id=WP_000852686.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3285211 3286044 . - . ID=gene3246;Name=SH03_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16265;old_locus_tag=SH03_16270 NZ_CP010441.1 Protein Homology CDS 3285211 3286044 . - 0 ID=cds3164;Parent=gene3246;Dbxref=Genbank:WP_000458406.1;Name=WP_000458406.1;gbkey=CDS;product=sulfate ABC transporter permease;protein_id=WP_000458406.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3286044 3287060 . - . ID=gene3247;Name=SH03_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16270;old_locus_tag=SH03_16275 NZ_CP010441.1 Protein Homology CDS 3286044 3287060 . - 0 ID=cds3165;Parent=gene3247;Dbxref=Genbank:WP_000290230.1;Name=WP_000290230.1;gbkey=CDS;product=thiosulfate-binding protein;protein_id=WP_000290230.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3287364 3288155 . - . ID=gene3248;Name=SH03_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16275;old_locus_tag=SH03_16280 NZ_CP010441.1 Protein Homology CDS 3287364 3288155 . - 0 ID=cds3166;Parent=gene3248;Dbxref=Genbank:WP_000517431.1;Name=WP_000517431.1;gbkey=CDS;product=oxidoreductase UcpA;protein_id=WP_000517431.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3288284 3289141 . - . ID=gene3249;Name=SH03_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16280;old_locus_tag=SH03_16285 NZ_CP010441.1 Protein Homology CDS 3288284 3289141 . - 0 ID=cds3167;Parent=gene3249;Dbxref=Genbank:WP_000966470.1;Name=WP_000966470.1;Note=repressor for murPQ%3B N-acetylmuramic acid 6-phosphate inducible;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000966470.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3289305 3290201 . + . ID=gene3250;Name=SH03_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16285;old_locus_tag=SH03_16290 NZ_CP010441.1 Protein Homology CDS 3289305 3290201 . + 0 ID=cds3168;Parent=gene3250;Dbxref=Genbank:WP_001159160.1;Name=WP_001159160.1;Note=catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway;gbkey=CDS;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_001159160.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3290205 3291629 . + . ID=gene3251;Name=murP;gbkey=Gene;gene=murP;gene_biotype=protein_coding;gene_synonym=yfeV;locus_tag=SH03_RS16290;old_locus_tag=SH03_16295 NZ_CP010441.1 Protein Homology CDS 3290205 3291629 . + 0 ID=cds3169;Parent=gene3251;Dbxref=Genbank:WP_001040483.1;Name=WP_001040483.1;Note=belongs to PEP-dependent PTS system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel%3B requires crr-encoded enzyme IIA-glucose component;gbkey=CDS;gene=murP;product=PTS N-acetylmuramic acid EIIBC component;protein_id=WP_001040483.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3291634 3292938 . + . ID=gene3252;Name=SH03_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16295;old_locus_tag=SH03_16300 NZ_CP010441.1 Protein Homology CDS 3291634 3292938 . + 0 ID=cds3170;Parent=gene3252;Dbxref=Genbank:WP_001327042.1;Name=WP_001327042.1;gbkey=CDS;product=penicillin-binding protein;protein_id=WP_001327042.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3293178 3294077 . - . ID=gene3253;Name=SH03_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16300;old_locus_tag=SH03_16305 NZ_CP010441.1 Protein Homology CDS 3293178 3294077 . - 0 ID=cds3171;Parent=gene3253;Dbxref=Genbank:WP_001350538.1;Name=WP_001350538.1;gbkey=CDS;product=deferrochelatase/peroxidase;protein_id=WP_001350538.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3294173 3294748 . - . ID=gene3254;Name=SH03_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16305;old_locus_tag=SH03_16310 NZ_CP010441.1 Protein Homology CDS 3294173 3294748 . - 0 ID=cds3172;Parent=gene3254;Dbxref=Genbank:WP_000838944.1;Name=WP_000838944.1;gbkey=CDS;product=RpoE-regulated lipoprotein;protein_id=WP_000838944.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3294809 3295258 . - . ID=gene3255;Name=SH03_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16310;old_locus_tag=SH03_16315 NZ_CP010441.1 Protein Homology CDS 3294809 3295258 . - 0 ID=cds3173;Parent=gene3255;Dbxref=Genbank:WP_001350539.1;Name=WP_001350539.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001350539.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3295245 3295670 . - . ID=gene3256;Name=SH03_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16315;old_locus_tag=SH03_16320 NZ_CP010441.1 Protein Homology CDS 3295245 3295670 . - 0 ID=cds3174;Parent=gene3256;Dbxref=Genbank:WP_000405996.1;Name=WP_000405996.1;gbkey=CDS;product=acetyltransferase YpeA;protein_id=WP_000405996.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3295884 3296753 . + . ID=gene3257;Name=SH03_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16320;old_locus_tag=SH03_16325 NZ_CP010441.1 Protein Homology CDS 3295884 3296753 . + 0 ID=cds3175;Parent=gene3257;Dbxref=Genbank:WP_000102886.1;Name=WP_000102886.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_000102886.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3296757 3297656 . + . ID=gene3258;Name=SH03_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16325;old_locus_tag=SH03_16330 NZ_CP010441.1 Protein Homology CDS 3296757 3297656 . + 0 ID=cds3176;Parent=gene3258;Dbxref=Genbank:WP_000801365.1;Name=WP_000801365.1;Note=catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_000801365.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3297662 3298714 . - . ID=gene3259;Name=SH03_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16330;old_locus_tag=SH03_16335 NZ_CP010441.1 Protein Homology CDS 3297662 3298714 . - 0 ID=cds3177;Parent=gene3259;Dbxref=Genbank:WP_000753690.1;Name=WP_000753690.1;Note=activates the transcription of the ethanolamine utilization operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000753690.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3298760 3299260 . - . ID=gene3260;Name=SH03_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16335;old_locus_tag=SH03_16340 NZ_CP010441.1 Protein Homology CDS 3298760 3299260 . - 0 ID=cds3178;Parent=gene3260;Dbxref=Genbank:WP_000606257.1;Name=WP_000606257.1;Note=ethanolamine utilization protein%3B involved in the degredation of ethanolamine;gbkey=CDS;product=ethanolamine utilization protein EutK;protein_id=WP_000606257.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3299273 3299932 . - . ID=gene3261;Name=SH03_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16340;old_locus_tag=SH03_16345 NZ_CP010441.1 Protein Homology CDS 3299273 3299932 . - 0 ID=cds3179;Parent=gene3261;Dbxref=Genbank:WP_001111023.1;Name=WP_001111023.1;Note=carboxysome structural protein involved in ethanolamine utilization;gbkey=CDS;product=ethanolamine utilization protein EutL;protein_id=WP_001111023.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3299942 3300829 . - . ID=gene3262;Name=SH03_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16345;old_locus_tag=SH03_16350 NZ_CP010441.1 Protein Homology CDS 3299942 3300829 . - 0 ID=cds3180;Parent=gene3262;Dbxref=Genbank:WP_000372316.1;Name=WP_000372316.1;Note=catalyzes the formation of acetaldehyde from ethanolamine;gbkey=CDS;product=ethanolamine ammonia-lyase light chain;protein_id=WP_000372316.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3300850 3302211 . - . ID=gene3263;Name=SH03_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16350;old_locus_tag=SH03_16355 NZ_CP010441.1 Protein Homology CDS 3300850 3302211 . - 0 ID=cds3181;Parent=gene3263;Dbxref=Genbank:WP_000769961.1;Name=WP_000769961.1;Note=with EutC catalyzes the formation of acetaldehyde and ammonia from ethanolamine;gbkey=CDS;product=ethanolamine ammonia-lyase heavy chain;protein_id=WP_000769961.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3302223 3303626 . - . ID=gene3264;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=SH03_RS16355;old_locus_tag=SH03_16360 NZ_CP010441.1 Protein Homology CDS 3302223 3303626 . - 0 ID=cds3182;Parent=gene3264;Dbxref=Genbank:WP_001097542.1;Name=WP_001097542.1;Note=ethanolamine utilization protein EutA;gbkey=CDS;gene=eutA;product=ethanolamine utilization protein EutA;protein_id=WP_001097542.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3303623 3304849 . - . ID=gene3265;Name=SH03_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16360;old_locus_tag=SH03_16365 NZ_CP010441.1 Protein Homology CDS 3303623 3304849 . - 0 ID=cds3183;Parent=gene3265;Dbxref=Genbank:WP_000512372.1;Name=WP_000512372.1;Note=may be involved in the transport of ethanolamine;gbkey=CDS;product=ethanolamine utilization protein EutH;protein_id=WP_000512372.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3305066 3306253 . - . ID=gene3266;Name=SH03_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16365;old_locus_tag=SH03_16370 NZ_CP010441.1 Protein Homology CDS 3305066 3306253 . - 0 ID=cds3184;Parent=gene3266;Dbxref=Genbank:WP_001326575.1;Name=WP_001326575.1;Note=aldehyde reductase%3B catalyzes the conversion of acetaldehyde to ethanol;gbkey=CDS;product=ethanolamine utilization protein EutG;protein_id=WP_001326575.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3306243 3307079 . - . ID=gene3267;Name=SH03_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16370;old_locus_tag=SH03_16375 NZ_CP010441.1 Protein Homology CDS 3306243 3307079 . - 0 ID=cds3185;Parent=gene3267;Dbxref=Genbank:WP_000929729.1;Name=WP_000929729.1;Note=possible chaperonin%3B may be involved in the assembly of the carboxysome;gbkey=CDS;product=ethanolamine utilization protein EutJ;protein_id=WP_000929729.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3307090 3308493 . - . ID=gene3268;Name=SH03_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16375;old_locus_tag=SH03_16380 NZ_CP010441.1 Protein Homology CDS 3307090 3308493 . - 0 ID=cds3186;Parent=gene3268;Dbxref=Genbank:WP_001075716.1;Name=WP_001075716.1;Note=ethanolamine utilization protein%3B catalyzes the formation of acetyl-CoA from acetaldehyde;gbkey=CDS;product=ethanolamine utilization protein EutE;protein_id=WP_001075716.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3308505 3308792 . - . ID=gene3269;Name=SH03_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16380;old_locus_tag=SH03_16385 NZ_CP010441.1 Protein Homology CDS 3308505 3308792 . - 0 ID=cds3187;Parent=gene3269;Dbxref=Genbank:WP_000762196.1;Name=WP_000762196.1;gbkey=CDS;product=ethanolamine utilization protein EutN;protein_id=WP_000762196.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3308899 3309192 . - . ID=gene3270;Name=SH03_RS16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16385;old_locus_tag=SH03_16390 NZ_CP010441.1 Protein Homology CDS 3308899 3309192 . - 0 ID=cds3188;Parent=gene3270;Dbxref=Genbank:WP_000387713.1;Name=WP_000387713.1;Note=ethanolamine utilization protein%3B involved in the degredation of ethanolamine;gbkey=CDS;product=ethanolamine utilization protein EutM;protein_id=WP_000387713.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3309231 3310247 . - . ID=gene3271;Name=SH03_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16390;old_locus_tag=SH03_16395 NZ_CP010441.1 Protein Homology CDS 3309231 3310247 . - 0 ID=cds3189;Parent=gene3271;Dbxref=Genbank:WP_000582977.1;Name=WP_000582977.1;gbkey=CDS;product=ethanolamine utilization protein EutD;protein_id=WP_000582977.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3310244 3311047 . - . ID=gene3272;Name=SH03_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16395;old_locus_tag=SH03_16400 NZ_CP010441.1 Protein Homology CDS 3310244 3311047 . - 0 ID=cds3190;Parent=gene3272;Dbxref=Genbank:WP_000651298.1;Name=WP_000651298.1;Note=catalyzes the conversion of cob(I)yrinic acid a%2Cc-diamide to adenosylcob(III)yrinic acid a%2Cc-diamide;gbkey=CDS;product=ethanolamine utilization cobalamin adenosyltransferase;protein_id=WP_000651298.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3311044 3311745 . - . ID=gene3273;Name=SH03_RS16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16400;old_locus_tag=SH03_16405 NZ_CP010441.1 Protein Homology CDS 3311044 3311745 . - 0 ID=cds3191;Parent=gene3273;Dbxref=Genbank:WP_000733906.1;Name=WP_000733906.1;gbkey=CDS;product=ethanolamine utilization protein EutQ;protein_id=WP_000733906.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3311720 3312199 . - . ID=gene3274;Name=SH03_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16405;old_locus_tag=SH03_16410 NZ_CP010441.1 Protein Homology CDS 3311720 3312199 . - 0 ID=cds3192;Parent=gene3274;Dbxref=Genbank:WP_000820763.1;Name=WP_000820763.1;gbkey=CDS;product=ethanolamine utilization protein EutP;protein_id=WP_000820763.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3312212 3312547 . - . ID=gene3275;Name=SH03_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16410;old_locus_tag=SH03_16415 NZ_CP010441.1 Protein Homology CDS 3312212 3312547 . - 0 ID=cds3193;Parent=gene3275;Dbxref=Genbank:WP_000356956.1;Name=WP_000356956.1;Note=ethanolamine utilization protein%3B involved in the degredation of ethanolamine;gbkey=CDS;product=ethanolamine utilization protein EutS;protein_id=WP_000356956.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3312840 3315119 . - . ID=gene3276;Name=SH03_RS16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16415;old_locus_tag=SH03_16420 NZ_CP010441.1 Protein Homology CDS 3312840 3315119 . - 0 ID=cds3194;Parent=gene3276;Dbxref=Genbank:WP_000342644.1;Name=WP_000342644.1;Note=NADP-dependent%3B catalyzes the oxidative decarboxylation of malate to form pyruvate%3B decarboxylates oxaloacetate;gbkey=CDS;product=NADP-dependent malic enzyme;protein_id=WP_000342644.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3315408 3316358 . + . ID=gene3277;Name=SH03_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16420;old_locus_tag=SH03_16425 NZ_CP010441.1 Protein Homology CDS 3315408 3316358 . + 0 ID=cds3195;Parent=gene3277;Dbxref=Genbank:WP_001003709.1;Name=WP_001003709.1;gbkey=CDS;product=transaldolase A;protein_id=WP_001003709.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3316378 3318381 . + . ID=gene3278;Name=SH03_RS16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16425;old_locus_tag=SH03_16430 NZ_CP010441.1 Protein Homology CDS 3316378 3318381 . + 0 ID=cds3196;Parent=gene3278;Dbxref=Genbank:WP_000087280.1;Name=WP_000087280.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;product=transketolase;protein_id=WP_000087280.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3318476 3319519 . - . ID=gene3279;Name=SH03_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16430;old_locus_tag=SH03_16435 NZ_CP010441.1 Protein Homology CDS 3318476 3319519 . - 0 ID=cds3197;Parent=gene3279;Dbxref=Genbank:WP_001270542.1;Name=WP_001270542.1;gbkey=CDS;product=DUF1176 domain-containing protein;protein_id=WP_001270542.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3319645 3320220 . - . ID=gene3280;Name=SH03_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16435;old_locus_tag=SH03_16440 NZ_CP010441.1 Protein Homology CDS 3319645 3320220 . - 0 ID=cds3198;Parent=gene3280;Dbxref=Genbank:WP_001300814.1;Name=WP_001300814.1;gbkey=CDS;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_001300814.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3320288 3322267 . - . ID=gene3281;Name=SH03_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16440;old_locus_tag=SH03_16445 NZ_CP010441.1 Protein Homology CDS 3320288 3322267 . - 0 ID=cds3199;Parent=gene3281;Dbxref=Genbank:WP_001078880.1;Name=WP_001078880.1;Note=unknown function%3B in E. coli the aegA gene is regulated by Fnr%2C NarXL%2C and NarQ (but not ArcA)%2C induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic);gbkey=CDS;product=protein AegA;protein_id=WP_001078880.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3322473 3324173 . + . ID=gene3282;Name=SH03_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16445;old_locus_tag=SH03_16450 NZ_CP010441.1 Protein Homology CDS 3322473 3324173 . + 0 ID=cds3200;Parent=gene3282;Dbxref=Genbank:WP_001698424.1;Name=WP_001698424.1;gbkey=CDS;product=nitrate/nitrite two-component system sensor histidine kinase;protein_id=WP_001698424.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3324337 3327450 . + . ID=gene3283;Name=SH03_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16450;old_locus_tag=SH03_16455 NZ_CP010441.1 Protein Homology CDS 3324337 3327450 . + 0 ID=cds3201;Parent=gene3283;Dbxref=Genbank:WP_001273151.1;Name=WP_001273151.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_001273151.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3327537 3327716 . + . ID=gene3284;Name=SH03_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16455;old_locus_tag=SH03_16460 NZ_CP010441.1 Protein Homology CDS 3327537 3327716 . + 0 ID=cds3202;Parent=gene3284;Dbxref=Genbank:WP_001308835.1;Name=WP_001308835.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001308835.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3327989 3328345 . + . ID=gene3285;Name=SH03_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16460;old_locus_tag=SH03_16465 NZ_CP010441.1 Protein Homology CDS 3327989 3328345 . + 0 ID=cds3203;Parent=gene3285;Dbxref=Genbank:WP_000258236.1;Name=WP_000258236.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000258236.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3328349 3329476 . + . ID=gene3286;Name=SH03_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16465;old_locus_tag=SH03_16470 NZ_CP010441.1 Protein Homology CDS 3328349 3329476 . + 0 ID=cds3204;Parent=gene3286;Dbxref=Genbank:WP_001277801.1;Name=WP_001277801.1;gbkey=CDS;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_001277801.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3329504 3329704 . + . ID=gene3287;Name=SH03_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16470;old_locus_tag=SH03_16475 NZ_CP010441.1 Protein Homology CDS 3329504 3329704 . + 0 ID=cds3205;Parent=gene3287;Dbxref=Genbank:WP_000383836.1;Name=WP_000383836.1;gbkey=CDS;product=membrane protein;protein_id=WP_000383836.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3329814 3330512 . - . ID=gene3288;Name=SH03_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16475;old_locus_tag=SH03_16480 NZ_CP010441.1 Protein Homology CDS 3329814 3330512 . - 0 ID=cds3206;Parent=gene3288;Dbxref=Genbank:WP_000679799.1;Name=WP_000679799.1;gbkey=CDS;product=esterase;protein_id=WP_000679799.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3330586 3332601 . - . ID=gene3289;Name=SH03_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16480;old_locus_tag=SH03_16485 NZ_CP010441.1 Protein Homology CDS 3330586 3332601 . - 0 ID=cds3207;Parent=gene3289;Dbxref=Genbank:WP_000829360.1;Name=WP_000829360.1;Note=cetylates the wobble base C34 of the elongation-specific methionine tRNA;gbkey=CDS;product=tRNA(Met) cytidine acetyltransferase TmcA;protein_id=WP_000829360.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3332616 3333479 . - . ID=gene3290;Name=SH03_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16485;old_locus_tag=SH03_16490 NZ_CP010441.1 Protein Homology CDS 3332616 3333479 . - 0 ID=cds3208;Parent=gene3290;Dbxref=Genbank:WP_001267498.1;Name=WP_001267498.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001267498.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3333647 3334360 . - . ID=gene3291;Name=SH03_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16490;old_locus_tag=SH03_16495 NZ_CP010441.1 Protein Homology CDS 3333647 3334360 . - 0 ID=cds3209;Parent=gene3291;Dbxref=Genbank:WP_001295467.1;Name=WP_001295467.1;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;gbkey=CDS;product=phosphoribosylaminoimidazole-succinocarboxamide synthase;protein_id=WP_001295467.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3334432 3334662 . + . ID=gene3292;Name=SH03_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16495;old_locus_tag=SH03_16500 NZ_CP010441.1 Protein Homology CDS 3334432 3334662 . + 0 ID=cds3210;Parent=gene3292;Dbxref=Genbank:WP_001349976.1;Name=WP_001349976.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001349976.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3334573 3335607 . - . ID=gene3293;Name=SH03_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16500;old_locus_tag=SH03_16505 NZ_CP010441.1 Protein Homology CDS 3334573 3335607 . - 0 ID=cds3211;Parent=gene3293;Dbxref=Genbank:WP_001297320.1;Name=WP_001297320.1;gbkey=CDS;product=outer membrane protein assembly factor BamC;protein_id=WP_001297320.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3335624 3336502 . - . ID=gene3294;Name=SH03_RS16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16505;old_locus_tag=SH03_16510 NZ_CP010441.1 Protein Homology CDS 3335624 3336502 . - 0 ID=cds3212;Parent=gene3294;Dbxref=Genbank:WP_001311023.1;Name=WP_001311023.1;gbkey=CDS;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_001311023.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3336648 3337220 . + . ID=gene3295;Name=gcvR;gbkey=Gene;gene=gcvR;gene_biotype=protein_coding;locus_tag=SH03_RS16510;old_locus_tag=SH03_16515 NZ_CP010441.1 Protein Homology CDS 3336648 3337220 . + 0 ID=cds3213;Parent=gene3295;Dbxref=Genbank:WP_000176187.1;Name=WP_000176187.1;Note=negative transcriptional regulator of the gcvTHP operon;gbkey=CDS;gene=gcvR;product=glycine cleavage system transcriptional regulator;protein_id=WP_000176187.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3337220 3337690 . + . ID=gene3296;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=SH03_RS16515;old_locus_tag=SH03_16520 NZ_CP010441.1 Protein Homology CDS 3337220 3337690 . + 0 ID=cds3214;Parent=gene3296;Dbxref=Genbank:WP_001068682.1;Name=WP_001068682.1;Note=bacterioferritin comigratory protein%3B thiol peroxidase%3B thioredoxin-dependent%3B hydroperoxide peroxidase%3B in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide%3B contains an active site cysteine;gbkey=CDS;gene=bcp;product=peroxiredoxin;protein_id=WP_001068682.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3337943 3338560 . + . ID=gene3297;Name=SH03_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16520;old_locus_tag=SH03_16525 NZ_CP010441.1 Protein Homology CDS 3337943 3338560 . + 0 ID=cds3215;Parent=gene3297;Dbxref=Genbank:WP_001336048.1;Name=WP_001336048.1;gbkey=CDS;product=hydrogenase-4 component A;protein_id=WP_001336048.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3338560 3340578 . + . ID=gene3298;Name=SH03_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16525;old_locus_tag=SH03_16530 NZ_CP010441.1 Protein Homology CDS 3338560 3340578 . + 0 ID=cds3216;Parent=gene3298;Dbxref=Genbank:WP_000339455.1;Name=WP_000339455.1;gbkey=CDS;product=hydrogenase-4 component B;protein_id=WP_000339455.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3340589 3341536 . + . ID=gene3299;Name=hycD;gbkey=Gene;gene=hycD;gene_biotype=protein_coding;locus_tag=SH03_RS16530;old_locus_tag=SH03_16535 NZ_CP010441.1 Protein Homology CDS 3340589 3341536 . + 0 ID=cds3217;Parent=gene3299;Dbxref=Genbank:WP_001311024.1;Name=WP_001311024.1;Note=formate hydrogenlyase subunit 4%3B HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide;gbkey=CDS;gene=hycD;product=hydrogenase-4 component C;protein_id=WP_001311024.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3341553 3342992 . + . ID=gene3300;Name=SH03_RS16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16535;old_locus_tag=SH03_16540 NZ_CP010441.1 Protein Homology CDS 3341553 3342992 . + 0 ID=cds3218;Parent=gene3300;Dbxref=Genbank:WP_000429104.1;Name=WP_000429104.1;gbkey=CDS;product=hydrogenase-4 component D;protein_id=WP_000429104.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3343004 3343654 . + . ID=gene3301;Name=hyfE;gbkey=Gene;gene=hyfE;gene_biotype=protein_coding;locus_tag=SH03_RS16540;old_locus_tag=SH03_16545 NZ_CP010441.1 Protein Homology CDS 3343004 3343654 . + 0 ID=cds3219;Parent=gene3301;Dbxref=Genbank:WP_000147987.1;Name=WP_000147987.1;Note=interacts with formate dehydrogenase to produce an active formate hydrogenlyase complex which cleaves formate to dihydrogen and carbon dioxide;gbkey=CDS;gene=hyfE;product=hydrogenase-4 component E;protein_id=WP_000147987.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3343659 3345239 . + . ID=gene3302;Name=SH03_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16545;old_locus_tag=SH03_16550 NZ_CP010441.1 Protein Homology CDS 3343659 3345239 . + 0 ID=cds3220;Parent=gene3302;Dbxref=Genbank:WP_000122577.1;Name=WP_000122577.1;gbkey=CDS;product=hydrogenase-4 component F;protein_id=WP_000122577.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3345229 3346896 . + . ID=gene3303;Name=SH03_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16550;old_locus_tag=SH03_16555 NZ_CP010441.1 Protein Homology CDS 3345229 3346896 . + 0 ID=cds3221;Parent=gene3303;Dbxref=Genbank:WP_001102321.1;Name=WP_001102321.1;gbkey=CDS;product=hydrogenase-4 component G;protein_id=WP_001102321.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3346906 3347451 . + . ID=gene3304;Name=SH03_RS16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16555;old_locus_tag=SH03_16560 NZ_CP010441.1 Protein Homology CDS 3346906 3347451 . + 0 ID=cds3222;Parent=gene3304;Dbxref=Genbank:WP_000916055.1;Name=WP_000916055.1;Note=electron transfer protein for hydrogenase-3%3B the formate hydrogenlyase complex comprises of a formate dehydrogenase%2C unidentified electron carriers and hydrogenase-3%3B in this non-energy conserving pathway%2C molecular hydrogen and carbodioxide are released from formate;gbkey=CDS;product=hydrogenase-4 component H;protein_id=WP_000916055.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3347448 3348206 . + . ID=gene3305;Name=SH03_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16560;old_locus_tag=SH03_16565 NZ_CP010441.1 Protein Homology CDS 3347448 3348206 . + 0 ID=cds3223;Parent=gene3305;Dbxref=Genbank:WP_000075558.1;Name=WP_000075558.1;gbkey=CDS;product=hydrogenase-4 component I;protein_id=WP_000075558.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3348199 3348612 . + . ID=gene3306;Name=SH03_RS16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16565;old_locus_tag=SH03_16570 NZ_CP010441.1 Protein Homology CDS 3348199 3348612 . + 0 ID=cds3224;Parent=gene3306;Dbxref=Genbank:WP_001326580.1;Name=WP_001326580.1;gbkey=CDS;product=hydrogenase-4 component J;protein_id=WP_001326580.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3348642 3350654 . + . ID=gene3307;Name=SH03_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16570;old_locus_tag=SH03_16575 NZ_CP010441.1 Protein Homology CDS 3348642 3350654 . + 0 ID=cds3225;Parent=gene3307;Dbxref=Genbank:WP_001251544.1;Name=WP_001251544.1;gbkey=CDS;product=hydrogenase-4 transcriptional activator;protein_id=WP_001251544.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3350676 3351524 . + . ID=gene3308;Name=SH03_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16575;old_locus_tag=SH03_16580 NZ_CP010441.1 Protein Homology CDS 3350676 3351524 . + 0 ID=cds3226;Parent=gene3308;Dbxref=Genbank:WP_001244734.1;Name=WP_001244734.1;gbkey=CDS;product=formate transporter;protein_id=WP_001244734.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3351562 3352623 . - . ID=gene3309;Name=SH03_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16580;old_locus_tag=SH03_16585 NZ_CP010441.1 Protein Homology CDS 3351562 3352623 . - 0 ID=cds3227;Parent=gene3309;Dbxref=Genbank:WP_000892044.1;Name=WP_000892044.1;gbkey=CDS;product=permease;protein_id=WP_000892044.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3352836 3354299 . + . ID=gene3310;Name=SH03_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16585;old_locus_tag=SH03_16590 NZ_CP010441.1 Protein Homology CDS 3352836 3354299 . + 0 ID=cds3228;Parent=gene3310;Dbxref=Genbank:WP_000489667.1;Name=WP_000489667.1;gbkey=CDS;product=beta-barrel assembly-enhancing protease;protein_id=WP_000489667.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3354320 3354679 . + . ID=gene3311;Name=SH03_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16590;old_locus_tag=SH03_16595 NZ_CP010441.1 Protein Homology CDS 3354320 3354679 . + 0 ID=cds3229;Parent=gene3311;Dbxref=Genbank:WP_000166446.1;Name=WP_000166446.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_000166446.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3354817 3355494 . - . ID=gene3312;Name=SH03_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16595;old_locus_tag=SH03_16600 NZ_CP010441.1 Protein Homology CDS 3354817 3355494 . - 0 ID=cds3230;Parent=gene3312;Dbxref=Genbank:WP_001302391.1;Name=WP_001302391.1;Note=controls initiation of DNA replication by inhibiting re-initiation of replication%2C promotes hydrolysis of DnaA-bound ATP;gbkey=CDS;product=DnaA regulatory inactivator Hda;protein_id=WP_001302391.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3355613 3356902 . - . ID=gene3313;Name=SH03_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16600;old_locus_tag=SH03_16605 NZ_CP010441.1 Protein Homology CDS 3355613 3356902 . - 0 ID=cds3231;Parent=gene3313;Dbxref=Genbank:WP_000198328.1;Name=WP_000198328.1;gbkey=CDS;product=uracil permease;protein_id=WP_000198328.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3356988 3357614 . - . ID=gene3314;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=SH03_RS16605;old_locus_tag=SH03_16610 NZ_CP010441.1 Protein Homology CDS 3356988 3357614 . - 0 ID=cds3232;Parent=gene3314;Dbxref=Genbank:WP_001295473.1;Name=WP_001295473.1;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate;gbkey=CDS;gene=upp;product=uracil phosphoribosyltransferase;protein_id=WP_001295473.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3357939 3358976 . + . ID=gene3315;Name=SH03_RS16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16610;old_locus_tag=SH03_16615 NZ_CP010441.1 Protein Homology CDS 3357939 3358976 . + 0 ID=cds3233;Parent=gene3315;Dbxref=Genbank:WP_001336050.1;Name=WP_001336050.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis;gbkey=CDS;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_001336050.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3358976 3359614 . + . ID=gene3316;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=SH03_RS16615;old_locus_tag=SH03_16620 NZ_CP010441.1 Protein Homology CDS 3358976 3359614 . + 0 ID=cds3234;Parent=gene3316;Dbxref=Genbank:WP_001028612.1;Name=WP_001028612.1;Note=glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate;gbkey=CDS;gene=purN;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_001028612.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3359786 3361852 . + . ID=gene3317;Name=SH03_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16620;old_locus_tag=SH03_16625 NZ_CP010441.1 Protein Homology CDS 3359786 3361852 . + 0 ID=cds3235;Parent=gene3317;Dbxref=Genbank:WP_000529576.1;Name=WP_000529576.1;gbkey=CDS;product=polyphosphate kinase;protein_id=WP_000529576.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3361857 3363398 . + . ID=gene3318;Name=SH03_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16625;old_locus_tag=SH03_16630 NZ_CP010441.1 Protein Homology CDS 3361857 3363398 . + 0 ID=cds3236;Parent=gene3318;Dbxref=Genbank:WP_001121363.1;Name=WP_001121363.1;gbkey=CDS;product=exopolyphosphatase;protein_id=WP_001121363.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3363437 3365680 . - . ID=gene3319;Name=SH03_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16630;old_locus_tag=SH03_16635 NZ_CP010441.1 Protein Homology CDS 3363437 3365680 . - 0 ID=cds3237;Parent=gene3319;Dbxref=Genbank:WP_000772731.1;Name=WP_000772731.1;gbkey=CDS;product=cyclic di-GMP phosphodiesterase YfgF;protein_id=WP_000772731.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3365862 3366014 . - . ID=gene3320;Name=SH03_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16635;old_locus_tag=SH03_16640 NZ_CP010441.1 Protein Homology CDS 3365862 3366014 . - 0 ID=cds3238;Parent=gene3320;Dbxref=Genbank:WP_000017552.1;Name=WP_000017552.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000017552.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3366032 3366223 . + . ID=gene3321;Name=SH03_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16640;old_locus_tag=SH03_16645 NZ_CP010441.1 Protein Homology CDS 3366032 3366223 . + 0 ID=cds3239;Parent=gene3321;Dbxref=Genbank:WP_000076001.1;Name=WP_000076001.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000076001.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3366537 3367052 . + . ID=gene3322;Name=SH03_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16645;old_locus_tag=SH03_16650 NZ_CP010441.1 Protein Homology CDS 3366537 3367052 . + 0 ID=cds3240;Parent=gene3322;Dbxref=Genbank:WP_000669402.1;Name=WP_000669402.1;gbkey=CDS;product=membrane protein;protein_id=WP_000669402.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3367068 3367607 . + . ID=gene3323;Name=SH03_RS16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16650;old_locus_tag=SH03_16655 NZ_CP010441.1 Protein Homology CDS 3367068 3367607 . + 0 ID=cds3241;Parent=gene3323;Dbxref=Genbank:WP_038432638.1;Name=WP_038432638.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038432638.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3367700 3369277 . - . ID=gene3324;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=SH03_RS16655;old_locus_tag=SH03_16660 NZ_CP010441.1 Protein Homology CDS 3367700 3369277 . - 0 ID=cds3242;Parent=gene3324;Dbxref=Genbank:WP_000138270.1;Name=WP_000138270.1;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;gbkey=CDS;gene=guaA;product=GMP synthase [glutamine-hydrolyzing];protein_id=WP_000138270.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3369346 3370812 . - . ID=gene3325;Name=SH03_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16660;old_locus_tag=SH03_16665 NZ_CP010441.1 Protein Homology CDS 3369346 3370812 . - 0 ID=cds3243;Parent=gene3325;Dbxref=Genbank:WP_001299507.1;Name=WP_001299507.1;gbkey=CDS;product=inosine-5-monophosphate dehydrogenase;protein_id=WP_001299507.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3370974 3372344 . + . ID=gene3326;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=SH03_RS16665;old_locus_tag=SH03_16670 NZ_CP010441.1 Protein Homology CDS 3370974 3372344 . + 0 ID=cds3244;Parent=gene3326;Dbxref=Genbank:WP_000937912.1;Name=WP_000937912.1;Note=bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides;gbkey=CDS;gene=xseA;product=exodeoxyribonuclease 7 large subunit;protein_id=WP_000937912.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3372341 3372556 . - . ID=gene3327;Name=SH03_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16670;old_locus_tag=SH03_16675 NZ_CP010441.1 Protein Homology CDS 3372341 3372556 . - 0 ID=cds3245;Parent=gene3327;Dbxref=Genbank:WP_001301158.1;Name=WP_001301158.1;gbkey=CDS;product=DUF1407 domain-containing protein;protein_id=WP_001301158.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3372626 3374098 . - . ID=gene3328;Name=SH03_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16675;old_locus_tag=SH03_16680 NZ_CP010441.1 Protein Homology CDS 3372626 3374098 . - 0 ID=cds3246;Parent=gene3328;Dbxref=Genbank:WP_000249410.1;Name=WP_000249410.1;gbkey=CDS;product=GTPase Der;protein_id=WP_000249410.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3374216 3375394 . - . ID=gene3329;Name=SH03_RS16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16680;old_locus_tag=SH03_16685 NZ_CP010441.1 Protein Homology CDS 3374216 3375394 . - 0 ID=cds3247;Parent=gene3329;Dbxref=Genbank:WP_001177052.1;Name=WP_001177052.1;gbkey=CDS;product=outer membrane protein assembly factor BamB;protein_id=WP_001177052.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3375405 3376025 . - . ID=gene3330;Name=SH03_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16685;old_locus_tag=SH03_16690 NZ_CP010441.1 Protein Homology CDS 3375405 3376025 . - 0 ID=cds3248;Parent=gene3330;Dbxref=Genbank:WP_000409205.1;Name=WP_000409205.1;gbkey=CDS;product=ancillary SecYEG translocon subunit;protein_id=WP_000409205.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3376043 3377317 . - . ID=gene3331;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=SH03_RS16690;old_locus_tag=SH03_16695 NZ_CP010441.1 Protein Homology CDS 3376043 3377317 . - 0 ID=cds3249;Parent=gene3331;Dbxref=Genbank:WP_001107167.1;Name=WP_001107167.1;Note=catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG;gbkey=CDS;gene=hisS;product=histidine--tRNA ligase;protein_id=WP_001107167.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3377428 3378546 . - . ID=gene3332;Name=SH03_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16695;old_locus_tag=SH03_16700 NZ_CP010441.1 Protein Homology CDS 3377428 3378546 . - 0 ID=cds3250;Parent=gene3332;Dbxref=Genbank:WP_000551807.1;Name=WP_000551807.1;gbkey=CDS;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin);protein_id=WP_000551807.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3378573 3379586 . - . ID=gene3333;Name=SH03_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16700;old_locus_tag=SH03_16705 NZ_CP010441.1 Protein Homology CDS 3378573 3379586 . - 0 ID=cds3251;Parent=gene3333;Dbxref=Genbank:WP_001090866.1;Name=WP_001090866.1;gbkey=CDS;product=cytoskeleton protein RodZ;protein_id=WP_001090866.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3379871 3381025 . - . ID=gene3334;Name=SH03_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16705;old_locus_tag=SH03_16710 NZ_CP010441.1 Protein Homology CDS 3379871 3381025 . - 0 ID=cds3252;Parent=gene3334;Dbxref=Genbank:WP_000003317.1;Name=WP_000003317.1;Note=23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance;gbkey=CDS;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_000003317.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3381175 3381606 . - . ID=gene3335;Name=SH03_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16710;old_locus_tag=SH03_16715 NZ_CP010441.1 Protein Homology CDS 3381175 3381606 . - 0 ID=cds3253;Parent=gene3335;Dbxref=Genbank:WP_000963837.1;Name=WP_000963837.1;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;gbkey=CDS;product=nucleoside diphosphate kinase;protein_id=WP_000963837.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3381755 3384067 . - . ID=gene3336;Name=SH03_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16715;old_locus_tag=SH03_16720 NZ_CP010441.1 Protein Homology CDS 3381755 3384067 . - 0 ID=cds3254;Parent=gene3336;Dbxref=Genbank:WP_001137675.1;Name=WP_001137675.1;Note=penicillin-insensitive transglycosylase/transpeptidase;gbkey=CDS;product=penicillin-binding protein 1C;protein_id=WP_001137675.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3384068 3389029 . - . ID=gene3337;Name=SH03_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16720;old_locus_tag=SH03_16725 NZ_CP010441.1 Protein Homology CDS 3384068 3389029 . - 0 ID=cds3255;Parent=gene3337;Dbxref=Genbank:WP_000736312.1;Name=WP_000736312.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000736312.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3389236 3390081 . + . ID=gene3338;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=SH03_RS16725;old_locus_tag=SH03_16730 NZ_CP010441.1 Protein Homology CDS 3389236 3390081 . + 0 ID=cds3256;Parent=gene3338;Dbxref=Genbank:WP_000108626.1;Name=WP_000108626.1;Note=catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds;gbkey=CDS;gene=sseA;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_000108626.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3390899 3391675 . - . ID=gene3339;Name=SH03_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16730;old_locus_tag=SH03_16735 NZ_CP010441.1 Protein Homology CDS 3390899 3391675 . - 0 ID=cds3257;Parent=gene3339;Dbxref=Genbank:WP_001295479.1;Name=WP_001295479.1;Note=enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I;gbkey=CDS;product=protein SseB;protein_id=WP_001295479.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3391817 3393100 . - . ID=gene3340;Name=SH03_RS16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16735;old_locus_tag=SH03_16740 NZ_CP010441.1 Protein Homology CDS 3391817 3393100 . - 0 ID=cds3258;Parent=gene3340;Dbxref=Genbank:WP_000133592.1;Name=WP_000133592.1;Note=catalyzes the removal of an N-terminal amino acid from a peptide or arylamide;gbkey=CDS;product=peptidase B;protein_id=WP_000133592.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3393278 3393478 . - . ID=gene3341;Name=SH03_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16740;old_locus_tag=SH03_16745 NZ_CP010441.1 Protein Homology CDS 3393278 3393478 . - 0 ID=cds3259;Parent=gene3341;Dbxref=Genbank:WP_000523616.1;Name=WP_000523616.1;gbkey=CDS;product=protein IscX;protein_id=WP_000523616.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3393490 3393825 . - . ID=gene3342;Name=SH03_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16745;old_locus_tag=SH03_16750 NZ_CP010441.1 Protein Homology CDS 3393490 3393825 . - 0 ID=cds3260;Parent=gene3342;Dbxref=Genbank:WP_001124469.1;Name=WP_001124469.1;gbkey=CDS;product=(2Fe-2S) ferredoxin;protein_id=WP_001124469.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3393827 3395677 . - . ID=gene3343;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=SH03_RS16750;old_locus_tag=SH03_16755 NZ_CP010441.1 Protein Homology CDS 3393827 3395677 . - 0 ID=cds3261;Parent=gene3343;Dbxref=Genbank:WP_001196613.1;Name=WP_001196613.1;Note=involved in the maturation of iron-sulfur cluster-containing proteins;gbkey=CDS;gene=hscA;product=chaperone protein HscA;protein_id=WP_001196613.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3395694 3396209 . - . ID=gene3344;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=SH03_RS16755;old_locus_tag=SH03_16760 NZ_CP010441.1 Protein Homology CDS 3395694 3396209 . - 0 ID=cds3262;Parent=gene3344;Dbxref=Genbank:WP_000384413.1;Name=WP_000384413.1;Note=J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone%3B may function in biogenesis of iron-sulfur proteins;gbkey=CDS;gene=hscB;product=co-chaperone protein HscB;protein_id=WP_000384413.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3396305 3396628 . - . ID=gene3345;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=SH03_RS16760;old_locus_tag=SH03_16765 NZ_CP010441.1 Protein Homology CDS 3396305 3396628 . - 0 ID=cds3263;Parent=gene3345;Dbxref=Genbank:WP_000028953.1;Name=WP_000028953.1;Note=forms iron-sulfur clusters of ferredoxin [2FE-2S]%3B binds iron in the presence of the thioredoxin reductase system%3B forms homodimers and tetramers%3B similar to SufA protein;gbkey=CDS;gene=iscA;product=iron-binding protein;protein_id=WP_000028953.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3396645 3397031 . - . ID=gene3346;Name=SH03_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16765;old_locus_tag=SH03_16770 NZ_CP010441.1 Protein Homology CDS 3396645 3397031 . - 0 ID=cds3264;Parent=gene3346;Dbxref=Genbank:WP_000331707.1;Name=WP_000331707.1;gbkey=CDS;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331707.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3397059 3398273 . - . ID=gene3347;Name=SH03_RS16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16770;old_locus_tag=SH03_16775 NZ_CP010441.1 Protein Homology CDS 3397059 3398273 . - 0 ID=cds3265;Parent=gene3347;Dbxref=Genbank:WP_001295373.1;Name=WP_001295373.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;product=cysteine desulfurase IscS;protein_id=WP_001295373.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3398385 3398873 . - . ID=gene3348;Name=SH03_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16775;old_locus_tag=SH03_16780 NZ_CP010441.1 Protein Homology CDS 3398385 3398873 . - 0 ID=cds3266;Parent=gene3348;Dbxref=Genbank:WP_001241357.1;Name=WP_001241357.1;Note=regulates the expression of the iscRSUA operon;gbkey=CDS;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241357.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 3399050 3399325 . + . ID=id178;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 3399325 3400065 . - . ID=gene3349;Name=SH03_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16780;old_locus_tag=SH03_16785 NZ_CP010441.1 Protein Homology CDS 3399325 3400065 . - 0 ID=cds3267;Parent=gene3349;Dbxref=Genbank:WP_000940019.1;Name=WP_000940019.1;Note=catalyzes the fromation of 2'O-methylated cytidine or 2'O-methylated uridine at position 32 in tRNA;gbkey=CDS;product=tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ;protein_id=WP_000940019.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3400184 3400987 . + . ID=gene3350;Name=SH03_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16785;old_locus_tag=SH03_16790 NZ_CP010441.1 Protein Homology CDS 3400184 3400987 . + 0 ID=cds3268;Parent=gene3350;Dbxref=Genbank:WP_000553451.1;Name=WP_000553451.1;gbkey=CDS;product=inositol-1-monophosphatase;protein_id=WP_000553451.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3401132 3401986 . + . ID=gene3351;Name=SH03_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16790;old_locus_tag=SH03_16795 NZ_CP010441.1 Protein Homology CDS 3401132 3401986 . + 0 ID=cds3269;Parent=gene3351;Dbxref=Genbank:WP_001297705.1;Name=WP_001297705.1;gbkey=CDS;product=S9 family prolyl oligopeptidase;protein_id=WP_001297705.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3402177 3403457 . + . ID=gene3352;Name=SH03_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16795;old_locus_tag=SH03_16800 NZ_CP010441.1 Protein Homology CDS 3402177 3403457 . + 0 ID=cds3270;Parent=gene3352;Dbxref=Genbank:WP_000982994.1;Name=WP_000982994.1;gbkey=CDS;product=stationary phase-inducible protein CsiE;protein_id=WP_000982994.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3403449 3404588 . - . ID=gene3353;Name=SH03_RS16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16800;old_locus_tag=SH03_16805 NZ_CP010441.1 Protein Homology CDS 3403449 3404588 . - 0 ID=cds3271;Parent=gene3353;Dbxref=Genbank:WP_000244193.1;Name=WP_000244193.1;Note=transporter of 3-phenylpropionate across the inner membrane%3B member of the major facilitator superfamily of transporters;gbkey=CDS;product=3-phenylpropionic acid transporter;protein_id=WP_000244193.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3404748 3405638 . - . ID=gene3354;Name=SH03_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16805;old_locus_tag=SH03_16810 NZ_CP010441.1 Protein Homology CDS 3404748 3405638 . - 0 ID=cds3272;Parent=gene3354;Dbxref=Genbank:WP_000423261.1;Name=WP_000423261.1;Note=activator of 3-phenylpropionic acid catabolism;gbkey=CDS;product=Hca operon transcriptional activator HcaR;protein_id=WP_000423261.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3405774 3407135 . + . ID=gene3355;Name=SH03_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16810;old_locus_tag=SH03_16815 NZ_CP010441.1 Protein Homology CDS 3405774 3407135 . + 0 ID=cds3273;Parent=gene3355;Dbxref=Genbank:WP_000211172.1;Name=WP_000211172.1;gbkey=CDS;product=3-phenylpropionate/cinnamic acid dioxygenase subunit alpha;protein_id=WP_000211172.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3407132 3407650 . + . ID=gene3356;Name=SH03_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16815;old_locus_tag=SH03_16820 NZ_CP010441.1 Protein Homology CDS 3407132 3407650 . + 0 ID=cds3274;Parent=gene3356;Dbxref=Genbank:WP_001276072.1;Name=WP_001276072.1;gbkey=CDS;product=3-phenylpropionate/cinnamic acid dioxygenase subunit beta;protein_id=WP_001276072.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3407650 3407970 . + . ID=gene3357;Name=SH03_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16820;old_locus_tag=SH03_16825 NZ_CP010441.1 Protein Homology CDS 3407650 3407970 . + 0 ID=cds3275;Parent=gene3357;Dbxref=Genbank:WP_001080102.1;Name=WP_001080102.1;gbkey=CDS;product=3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit;protein_id=WP_001080102.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3407967 3408779 . + . ID=gene3358;Name=SH03_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16825;old_locus_tag=SH03_16830 NZ_CP010441.1 Protein Homology CDS 3407967 3408779 . + 0 ID=cds3276;Parent=gene3358;Dbxref=Genbank:WP_001281379.1;Name=WP_001281379.1;Note=Converts cis-3-(3-carboxyethyl)-3%2C5-cyclohexadiene-1%2C2-diol (PP-dihydrodiol) into 3-(2%2C3-dihydroxylphenyl)propionate;gbkey=CDS;product=3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase;protein_id=WP_001281379.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3408789 3409991 . + . ID=gene3359;Name=SH03_RS16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16830;old_locus_tag=SH03_16835 NZ_CP010441.1 Protein Homology CDS 3408789 3409991 . + 0 ID=cds3277;Parent=gene3359;Dbxref=Genbank:WP_000660788.1;Name=WP_000660788.1;gbkey=CDS;product=3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD+ reductase component;protein_id=WP_000660788.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3410088 3410510 . + . ID=gene3360;Name=SH03_RS16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16835;old_locus_tag=SH03_16840 NZ_CP010441.1 Protein Homology CDS 3410088 3410510 . + 0 ID=cds3278;Parent=gene3360;Dbxref=Genbank:WP_001094726.1;Name=WP_001094726.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001094726.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3410558 3411430 . - . ID=gene3361;Name=SH03_RS16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16840;old_locus_tag=SH03_16845 NZ_CP010441.1 Protein Homology CDS 3410558 3411430 . - 0 ID=cds3279;Parent=gene3361;Dbxref=Genbank:WP_000158547.1;Name=WP_000158547.1;gbkey=CDS;product=mutarotase superfamily protein%2C YphB family;protein_id=WP_000158547.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3411442 3412503 . - . ID=gene3362;Name=SH03_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16845;old_locus_tag=SH03_16850 NZ_CP010441.1 Protein Homology CDS 3411442 3412503 . - 0 ID=cds3280;Parent=gene3362;Dbxref=Genbank:WP_001393448.1;Name=WP_001393448.1;gbkey=CDS;product=Zn-dependent NAD(P)-binding oxidoreductase;protein_id=WP_001393448.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3412569 3413567 . - . ID=gene3363;Name=SH03_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16850;old_locus_tag=SH03_16855 NZ_CP010441.1 Protein Homology CDS 3412569 3413567 . - 0 ID=cds3281;Parent=gene3363;Dbxref=Genbank:WP_001276670.1;Name=WP_001276670.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_001276670.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3413592 3415103 . - . ID=gene3364;Name=SH03_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16855;old_locus_tag=SH03_16860 NZ_CP010441.1 Protein Homology CDS 3413592 3415103 . - 0 ID=cds3282;Parent=gene3364;Dbxref=Genbank:WP_000493470.1;Name=WP_000493470.1;gbkey=CDS;product=sugar ABC transporter ATPase;protein_id=WP_000493470.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3415126 3416109 . - . ID=gene3365;Name=SH03_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16860;old_locus_tag=SH03_16865 NZ_CP010441.1 Protein Homology CDS 3415126 3416109 . - 0 ID=cds3283;Parent=gene3365;Dbxref=Genbank:WP_001142427.1;Name=WP_001142427.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_001142427.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3416206 3419487 . - . ID=gene3366;Name=SH03_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16865;old_locus_tag=SH03_16870 NZ_CP010441.1 Protein Homology CDS 3416206 3419487 . - 0 ID=cds3284;Parent=gene3366;Dbxref=Genbank:WP_001333903.1;Name=WP_001333903.1;gbkey=CDS;product=DUF4380 domain-containing protein;protein_id=WP_001333903.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3419605 3420798 . + . ID=gene3367;Name=SH03_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16870;old_locus_tag=SH03_16875 NZ_CP010441.1 Protein Homology CDS 3419605 3420798 . + 0 ID=cds3285;Parent=gene3367;Dbxref=Genbank:WP_001200769.1;Name=WP_001200769.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001200769.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3420996 3422249 . - . ID=gene3368;Name=SH03_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16875;old_locus_tag=SH03_16880 NZ_CP010441.1 Protein Homology CDS 3420996 3422249 . - 0 ID=cds3286;Parent=gene3368;Dbxref=Genbank:WP_000919159.1;Name=WP_000919159.1;gbkey=CDS;product=serine hydroxymethyltransferase;protein_id=WP_000919159.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3422577 3423767 . + . ID=gene3369;Name=SH03_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16880;old_locus_tag=SH03_16885 NZ_CP010441.1 Protein Homology CDS 3422577 3423767 . + 0 ID=cds3287;Parent=gene3369;Dbxref=Genbank:WP_000883122.1;Name=WP_000883122.1;Note=flavohemoprotein%3B catalyzes the formation of nitrate from nitric oxide%3B can also catalyze the reduction of dihydropteridine;gbkey=CDS;product=flavohemoprotein;protein_id=WP_000883122.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3423812 3424150 . - . ID=gene3370;Name=SH03_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16885;old_locus_tag=SH03_16890 NZ_CP010441.1 Protein Homology CDS 3423812 3424150 . - 0 ID=cds3288;Parent=gene3370;Dbxref=Genbank:WP_000717694.1;Name=WP_000717694.1;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA;gbkey=CDS;product=nitrogen regulatory protein P-II 1;protein_id=WP_000717694.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3424211 3425545 . - . ID=gene3371;Name=SH03_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16890;old_locus_tag=SH03_16895 NZ_CP010441.1 Protein Homology CDS 3424211 3425545 . - 0 ID=cds3289;Parent=gene3371;Dbxref=Genbank:WP_001295369.1;Name=WP_001295369.1;Note=with GlrK is part of a two-component signal transduction system regulating glmY;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001295369.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3425535 3426248 . - . ID=gene3372;Name=SH03_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16895;old_locus_tag=SH03_16900 NZ_CP010441.1 Protein Homology CDS 3425535 3426248 . - 0 ID=cds3290;Parent=gene3372;Dbxref=Genbank:WP_001215861.1;Name=WP_001215861.1;gbkey=CDS;product=quorum-sensing regulator protein G;protein_id=WP_001215861.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3426413 3427840 . - . ID=gene3373;Name=SH03_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16900;old_locus_tag=SH03_16905 NZ_CP010441.1 Protein Homology CDS 3426413 3427840 . - 0 ID=cds3291;Parent=gene3373;Dbxref=Genbank:WP_001311037.1;Name=WP_001311037.1;Note=part of the GlrKR two-component signal transduction system involved in the regulation of glmY;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_001311037.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3428398 3432285 . - . ID=gene3374;Name=SH03_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16905;old_locus_tag=SH03_16910 NZ_CP010441.1 Protein Homology CDS 3428398 3432285 . - 0 ID=cds3292;Parent=gene3374;Dbxref=Genbank:WP_000970102.1;Name=WP_000970102.1;Note=catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis;gbkey=CDS;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_000970102.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3432543 3434099 . + . ID=gene3375;Name=SH03_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16910;old_locus_tag=SH03_16915 NZ_CP010441.1 Protein Homology CDS 3432543 3434099 . + 0 ID=cds3293;Parent=gene3375;Dbxref=Genbank:WP_000734212.1;Name=WP_000734212.1;gbkey=CDS;product=murein transglycosylase;protein_id=WP_000734212.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3434096 3434599 . - . ID=gene3376;Name=SH03_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16915;old_locus_tag=SH03_16920 NZ_CP010441.1 Protein Homology CDS 3434096 3434599 . - 0 ID=cds3294;Parent=gene3376;Dbxref=Genbank:WP_001297409.1;Name=WP_001297409.1;gbkey=CDS;product=tRNA-specific adenosine deaminase;protein_id=WP_001297409.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3434657 3435292 . - . ID=gene3377;Name=SH03_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16920;old_locus_tag=SH03_16925 NZ_CP010441.1 Protein Homology CDS 3434657 3435292 . - 0 ID=cds3295;Parent=gene3377;Dbxref=Genbank:WP_000190655.1;Name=WP_000190655.1;gbkey=CDS;product=phosphatidylglycerophosphatase C;protein_id=WP_000190655.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3435501 3436349 . + . ID=gene3378;Name=SH03_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16925;old_locus_tag=SH03_16930 NZ_CP010441.1 Protein Homology CDS 3435501 3436349 . + 0 ID=cds3296;Parent=gene3378;Dbxref=Genbank:WP_001013779.1;Name=WP_001013779.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001013779.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3436405 3436665 . + . ID=gene3379;Name=SH03_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16930;old_locus_tag=SH03_16935 NZ_CP010441.1 Protein Homology CDS 3436405 3436665 . + 0 ID=cds3297;Parent=gene3379;Dbxref=Genbank:WP_001196283.1;Name=WP_001196283.1;gbkey=CDS;product=4Fe-4S binding protein;protein_id=WP_001196283.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3436859 3436939 . - . ID=gene3380;Name=SH03_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16935;old_locus_tag=SH03_16940 NZ_CP010441.1 Protein Homology CDS 3436859 3436939 . - 0 ID=cds3298;Parent=gene3380;Dbxref=Genbank:WP_000128776.1;Name=WP_000128776.1;gbkey=CDS;product=small toxic protein ShoB;protein_id=WP_000128776.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3436936 3437088 . - . ID=gene3381;Name=SH03_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16940;old_locus_tag=SH03_16945 NZ_CP010441.1 Protein Homology CDS 3436936 3437088 . - 0 ID=cds3299;Parent=gene3381;Dbxref=Genbank:WP_012135949.1;Name=WP_012135949.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012135949.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3437125 3437253 . + . ID=gene3382;Name=SH03_RS16945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS16945;partial=true;pseudo=true;start_range=.,3437125 NZ_CP010441.1 Protein Homology CDS 3437125 3437253 . + 0 ID=cds3300;Parent=gene3382;gbkey=CDS;partial=true;product=glutamate decarboxylase;pseudo=true;start_range=.,3437125;transl_except=(pos:3437158..3437160%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq gene 3437360 3437740 . - . ID=gene3383;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=SH03_RS16950;old_locus_tag=SH03_16955 NZ_CP010441.1 Protein Homology CDS 3437360 3437740 . - 0 ID=cds3301;Parent=gene3383;Dbxref=Genbank:WP_000986023.1;Name=WP_000986023.1;Note=Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids;gbkey=CDS;gene=acpS;product=holo-ACP synthase;protein_id=WP_000986023.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3437740 3438471 . - . ID=gene3384;Name=SH03_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16955;old_locus_tag=SH03_16960 NZ_CP010441.1 Protein Homology CDS 3437740 3438471 . - 0 ID=cds3302;Parent=gene3384;Dbxref=Genbank:WP_001297412.1;Name=WP_001297412.1;Note=involved in the de novo synthesis of pyridoxine (Vitamin B6);gbkey=CDS;product=pyridoxine 5'-phosphate synthase;protein_id=WP_001297412.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3438483 3439211 . - . ID=gene3385;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=SH03_RS16960;old_locus_tag=SH03_16965 NZ_CP010441.1 Protein Homology CDS 3438483 3439211 . - 0 ID=cds3303;Parent=gene3385;Dbxref=Genbank:WP_000399404.1;Name=WP_000399404.1;Note=involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA;gbkey=CDS;gene=recO;product=DNA repair protein RecO;protein_id=WP_000399404.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3439223 3440128 . - . ID=gene3386;Name=SH03_RS16965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16965;old_locus_tag=SH03_16970 NZ_CP010441.1 Protein Homology CDS 3439223 3440128 . - 0 ID=cds3304;Parent=gene3386;Dbxref=Genbank:WP_000020749.1;Name=WP_000020749.1;gbkey=CDS;product=GTPase Era;protein_id=WP_000020749.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3440125 3440805 . - . ID=gene3387;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=SH03_RS16970;old_locus_tag=SH03_16975 NZ_CP010441.1 Protein Homology CDS 3440125 3440805 . - 0 ID=cds3305;Parent=gene3387;Dbxref=Genbank:WP_001068343.1;Name=WP_001068343.1;Note=cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity;gbkey=CDS;gene=rnc;product=ribonuclease 3;protein_id=WP_001068343.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3441077 3442051 . - . ID=gene3388;Name=SH03_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16975;old_locus_tag=SH03_16980 NZ_CP010441.1 Protein Homology CDS 3441077 3442051 . - 0 ID=cds3306;Parent=gene3388;Dbxref=Genbank:WP_000002541.1;Name=WP_000002541.1;Note=catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins;gbkey=CDS;product=signal peptidase I;protein_id=WP_000002541.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3442067 3443866 . - . ID=gene3389;Name=SH03_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16980;old_locus_tag=SH03_16985 NZ_CP010441.1 Protein Homology CDS 3442067 3443866 . - 0 ID=cds3307;Parent=gene3389;Dbxref=Genbank:WP_000790168.1;Name=WP_000790168.1;gbkey=CDS;product=elongation factor 4;protein_id=WP_000790168.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3444064 3444543 . - . ID=gene3390;Name=SH03_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16985;old_locus_tag=SH03_16990 NZ_CP010441.1 Protein Homology CDS 3444064 3444543 . - 0 ID=cds3308;Parent=gene3390;Dbxref=Genbank:WP_000589068.1;Name=WP_000589068.1;Note=involved in the reduction of the SoxR iron-sulfur cluster;gbkey=CDS;product=protein RseC;protein_id=WP_000589068.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3444540 3445496 . - . ID=gene3391;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=SH03_RS16990;old_locus_tag=SH03_16995 NZ_CP010441.1 Protein Homology CDS 3444540 3445496 . - 0 ID=cds3309;Parent=gene3391;Dbxref=Genbank:WP_000812053.1;Name=WP_000812053.1;Note=periplasmic protein%3B interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP;gbkey=CDS;gene=rseB;product=sigma-E factor regulatory protein RseB;protein_id=WP_000812053.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3445496 3446146 . - . ID=gene3392;Name=SH03_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS16995;old_locus_tag=SH03_17000 NZ_CP010441.1 Protein Homology CDS 3445496 3446146 . - 0 ID=cds3310;Parent=gene3392;Dbxref=Genbank:WP_001168459.1;Name=WP_001168459.1;gbkey=CDS;product=anti-sigma-E factor RseA;protein_id=WP_001168459.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3446179 3446754 . - . ID=gene3393;Name=SH03_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17000;old_locus_tag=SH03_17005 NZ_CP010441.1 Protein Homology CDS 3446179 3446754 . - 0 ID=cds3311;Parent=gene3393;Dbxref=Genbank:WP_001295364.1;Name=WP_001295364.1;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response;gbkey=CDS;product=ECF RNA polymerase sigma-E factor;protein_id=WP_001295364.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3446751 3446906 . - . ID=gene3394;Name=SH03_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17005;old_locus_tag=SH03_17010 NZ_CP010441.1 Protein Homology CDS 3446751 3446906 . - 0 ID=cds3312;Parent=gene3394;Dbxref=Genbank:WP_001303621.1;Name=WP_001303621.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001303621.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3447162 3448784 . + . ID=gene3395;Name=SH03_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17010;old_locus_tag=SH03_17015 NZ_CP010441.1 Protein Homology CDS 3447162 3448784 . + 0 ID=cds3313;Parent=gene3395;Dbxref=Genbank:WP_001094491.1;Name=WP_001094491.1;Note=catalyzes the formation of oxaloacetate from L-aspartate;gbkey=CDS;product=L-aspartate oxidase;protein_id=WP_001094491.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3448769 3449506 . - . ID=gene3396;Name=SH03_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17015;old_locus_tag=SH03_17020 NZ_CP010441.1 Protein Homology CDS 3448769 3449506 . - 0 ID=cds3314;Parent=gene3396;Dbxref=Genbank:WP_001295363.1;Name=WP_001295363.1;gbkey=CDS;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_001295363.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3449638 3450972 . + . ID=gene3397;Name=SH03_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17020;old_locus_tag=SH03_17025 NZ_CP010441.1 Protein Homology CDS 3449638 3450972 . + 0 ID=cds3315;Parent=gene3397;Dbxref=Genbank:WP_000219203.1;Name=WP_000219203.1;Note=facilitates an early step in the assembly of the 50S subunit of the ribosome;gbkey=CDS;product=ATP-dependent RNA helicase SrmB;protein_id=WP_000219203.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3450978 3451130 . + . ID=gene3398;Name=SH03_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17025;old_locus_tag=SH03_17030 NZ_CP010441.1 Protein Homology CDS 3450978 3451130 . + 0 ID=cds3316;Parent=gene3398;Dbxref=Genbank:WP_001299513.1;Name=WP_001299513.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001299513.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3451181 3452062 . - . ID=gene3399;Name=SH03_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17030;old_locus_tag=SH03_17035 NZ_CP010441.1 Protein Homology CDS 3451181 3452062 . - 0 ID=cds3317;Parent=gene3399;Dbxref=Genbank:WP_001300638.1;Name=WP_001300638.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001300638.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3452165 3452752 . + . ID=gene3400;Name=SH03_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17035;old_locus_tag=SH03_17040 NZ_CP010441.1 Protein Homology CDS 3452165 3452752 . + 0 ID=cds3318;Parent=gene3400;Dbxref=Genbank:WP_000189207.1;Name=WP_000189207.1;gbkey=CDS;product=cysteine/O-acetylserine efflux protein;protein_id=WP_000189207.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3452808 3453191 . - . ID=gene3401;Name=SH03_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17040;old_locus_tag=SH03_17045 NZ_CP010441.1 Protein Homology CDS 3452808 3453191 . - 0 ID=cds3319;Parent=gene3401;Dbxref=Genbank:WP_000627807.1;Name=WP_000627807.1;Note=stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit;gbkey=CDS;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627807.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3453496 3454185 . + . ID=gene3402;Name=SH03_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17045;old_locus_tag=SH03_17050 NZ_CP010441.1 Protein Homology CDS 3453496 3454185 . + 0 ID=cds3320;Parent=gene3402;Dbxref=Genbank:WP_001262716.1;Name=WP_001262716.1;Note=Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine;gbkey=CDS;product=uracil-DNA glycosylase;protein_id=WP_001262716.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3454233 3455270 . - . ID=gene3403;Name=SH03_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17050;old_locus_tag=SH03_17055 NZ_CP010441.1 Protein Homology CDS 3454233 3455270 . - 0 ID=cds3321;Parent=gene3403;Dbxref=Genbank:WP_000997403.1;Name=WP_000997403.1;gbkey=CDS;product=methyltransferase;protein_id=WP_000997403.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3455260 3455418 . - . ID=gene3404;Name=SH03_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17055;old_locus_tag=SH03_17060 NZ_CP010441.1 Protein Homology CDS 3455260 3455418 . - 0 ID=cds3322;Parent=gene3404;Dbxref=Genbank:WP_000902363.1;Name=WP_000902363.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000902363.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3455477 3455896 . + . ID=gene3405;Name=SH03_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17060;old_locus_tag=SH03_17065 NZ_CP010441.1 Protein Homology CDS 3455477 3455896 . + 0 ID=cds3323;Parent=gene3405;Dbxref=Genbank:WP_001098726.1;Name=WP_001098726.1;gbkey=CDS;product=thioredoxin;protein_id=WP_001098726.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3455965 3456663 . + . ID=gene3406;Name=SH03_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17065;old_locus_tag=SH03_17070 NZ_CP010441.1 Protein Homology CDS 3455965 3456663 . + 0 ID=cds3324;Parent=gene3406;Dbxref=Genbank:WP_001300438.1;Name=WP_001300438.1;gbkey=CDS;product=DTW domain-containing protein YfiP;protein_id=WP_001300438.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3456695 3459355 . + . ID=gene3407;Name=SH03_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17070;old_locus_tag=SH03_17075 NZ_CP010441.1 Protein Homology CDS 3456695 3459355 . + 0 ID=cds3325;Parent=gene3407;Dbxref=Genbank:WP_000083005.1;Name=WP_000083005.1;Note=catalyzes the acetylation of lysine;gbkey=CDS;product=protein lysine acetyltransferase Pka;protein_id=WP_000083005.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3459469 3460824 . + . ID=gene3408;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=SH03_RS17075;old_locus_tag=SH03_17080 NZ_CP010441.1 Protein Homology CDS 3459469 3460824 . + 0 ID=cds3326;Parent=gene3408;Dbxref=Genbank:WP_000949265.1;Name=WP_000949265.1;Note=catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome;gbkey=CDS;gene=pssA;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949265.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3460921 3461193 . + . ID=gene3409;Name=SH03_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17080;old_locus_tag=SH03_17085 NZ_CP010441.1 Protein Homology CDS 3460921 3461193 . + 0 ID=cds3327;Parent=gene3409;Dbxref=Genbank:WP_001262565.1;Name=WP_001262565.1;gbkey=CDS;product=lipoprotein;protein_id=WP_001262565.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3461190 3462488 . - . ID=gene3410;Name=SH03_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17085;old_locus_tag=SH03_17090 NZ_CP010441.1 Protein Homology CDS 3461190 3462488 . - 0 ID=cds3328;Parent=gene3410;Dbxref=Genbank:WP_000841103.1;Name=WP_000841103.1;gbkey=CDS;product=alpha-ketoglutarate permease;protein_id=WP_000841103.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3462604 3462804 . - . ID=gene3411;Name=SH03_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17090 NZ_CP010441.1 Protein Homology CDS 3462604 3462804 . - 0 ID=cds3329;Parent=gene3411;Dbxref=Genbank:WP_001223975.1;Name=WP_001223975.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001223975.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 3462804 3466039 . + . ID=id179;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 3462813 3462928 . - . ID=gene3412;Name=SH03_RS17095;gbkey=Gene;gene_biotype=rRNA;locus_tag=SH03_RS17095;old_locus_tag=SH03_17100 NZ_CP010441.1 cmsearch rRNA 3462813 3462928 . - . ID=rna82;Parent=gene3412;gbkey=rRNA;product=5S ribosomal RNA NZ_CP010441.1 cmsearch exon 3462813 3462928 . - . ID=id180;Parent=rna82;gbkey=rRNA;product=5S ribosomal RNA NZ_CP010441.1 RefSeq gene 3463006 3465935 . - . ID=gene3413;Name=SH03_RS17100;gbkey=Gene;gene_biotype=rRNA;locus_tag=SH03_RS17100;old_locus_tag=SH03_17105 NZ_CP010441.1 RefSeq rRNA 3463006 3465935 . - . ID=rna83;Parent=gene3413;gbkey=rRNA;product=23S ribosomal RNA NZ_CP010441.1 RefSeq exon 3463006 3465935 . - . ID=id181;Parent=rna83;gbkey=rRNA;product=23S ribosomal RNA NZ_CP010441.1 RefSeq gene 3466111 3466186 . - . ID=gene3414;Name=SH03_RS17105;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS17105;old_locus_tag=SH03_17110 NZ_CP010441.1 tRNAscan-SE tRNA 3466111 3466186 . - . ID=rna84;Parent=gene3414;anticodon=(pos:complement(3466150..3466152));gbkey=tRNA;product=tRNA-Glu NZ_CP010441.1 tRNAscan-SE exon 3466111 3466186 . - . ID=id182;Parent=rna84;anticodon=(pos:complement(3466150..3466152));gbkey=tRNA;product=tRNA-Glu NZ_CP010441.1 RefSeq repeat_region 3466293 3468227 . + . ID=id183;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 3466346 3467901 . - . ID=gene3415;Name=SH03_RS17110;gbkey=Gene;gene_biotype=rRNA;locus_tag=SH03_RS17110;old_locus_tag=SH03_17115 NZ_CP010441.1 RefSeq rRNA 3466346 3467901 . - . ID=rna85;Parent=gene3415;gbkey=rRNA;product=16S ribosomal RNA NZ_CP010441.1 RefSeq exon 3466346 3467901 . - . ID=id184;Parent=rna85;gbkey=rRNA;product=16S ribosomal RNA NZ_CP010441.1 RefSeq gene 3468342 3470915 . - . ID=gene3416;Name=SH03_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17115;old_locus_tag=SH03_17120 NZ_CP010441.1 Protein Homology CDS 3468342 3470915 . - 0 ID=cds3330;Parent=gene3416;Dbxref=Genbank:WP_001235102.1;Name=WP_001235102.1;gbkey=CDS;product=chaperone protein ClpB;protein_id=WP_001235102.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3471045 3471776 . - . ID=gene3417;Name=SH03_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17120;old_locus_tag=SH03_17125 NZ_CP010441.1 Protein Homology CDS 3471045 3471776 . - 0 ID=cds3331;Parent=gene3417;Dbxref=Genbank:WP_000040169.1;Name=WP_000040169.1;gbkey=CDS;product=Laccase YfiH;protein_id=WP_000040169.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3471773 3472753 . - . ID=gene3418;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=SH03_RS17125;old_locus_tag=SH03_17130 NZ_CP010441.1 Protein Homology CDS 3471773 3472753 . - 0 ID=cds3332;Parent=gene3418;Dbxref=Genbank:WP_000079100.1;Name=WP_000079100.1;Note=responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA;gbkey=CDS;gene=rluD;product=ribosomal large subunit pseudouridine synthase D;protein_id=WP_000079100.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3472888 3473625 . + . ID=gene3419;Name=SH03_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17130;old_locus_tag=SH03_17135 NZ_CP010441.1 Protein Homology CDS 3472888 3473625 . + 0 ID=cds3333;Parent=gene3419;Dbxref=Genbank:WP_000197686.1;Name=WP_000197686.1;gbkey=CDS;product=outer membrane protein assembly factor BamD;protein_id=WP_000197686.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3473655 3473861 . + . ID=gene3420;Name=SH03_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17135;old_locus_tag=SH03_17140 NZ_CP010441.1 Protein Homology CDS 3473655 3473861 . + 0 ID=cds3334;Parent=gene3420;Dbxref=Genbank:WP_001336203.1;Name=WP_001336203.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001336203.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3473896 3474237 . + . ID=gene3421;Name=SH03_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17140;old_locus_tag=SH03_17145 NZ_CP010441.1 Protein Homology CDS 3473896 3474237 . + 0 ID=cds3335;Parent=gene3421;Dbxref=Genbank:WP_000178456.1;Name=WP_000178456.1;Note=associated with 30S ribosomal subunit%3B interferes with translation elongation;gbkey=CDS;product=ribosome-associated inhibitor A;protein_id=WP_000178456.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3474487 3475647 . + . ID=gene3422;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=SH03_RS17145;old_locus_tag=SH03_17150 NZ_CP010441.1 Protein Homology CDS 3474487 3475647 . + 0 ID=cds3336;Parent=gene3422;Dbxref=Genbank:WP_000200120.1;Name=WP_000200120.1;Note=catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis;gbkey=CDS;gene=pheA;product=P-protein;protein_id=WP_000200120.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3475690 3476811 . - . ID=gene3423;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=SH03_RS17150;old_locus_tag=SH03_17155 NZ_CP010441.1 Protein Homology CDS 3475690 3476811 . - 0 ID=cds3337;Parent=gene3423;Dbxref=Genbank:WP_000225229.1;Name=WP_000225229.1;Note=catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis;gbkey=CDS;gene=tyrA;product=T-protein;protein_id=WP_000225229.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3476822 3477892 . - . ID=gene3424;Name=SH03_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17155;old_locus_tag=SH03_17160 NZ_CP010441.1 Protein Homology CDS 3476822 3477892 . - 0 ID=cds3338;Parent=gene3424;Dbxref=Genbank:WP_001168037.1;Name=WP_001168037.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C tyrosine sensitive;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase Tyr-sensitive;protein_id=WP_001168037.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3478102 3478467 . + . ID=gene3425;Name=SH03_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17160;old_locus_tag=SH03_17165 NZ_CP010441.1 Protein Homology CDS 3478102 3478467 . + 0 ID=cds3339;Parent=gene3425;Dbxref=Genbank:WP_000976004.1;Name=WP_000976004.1;gbkey=CDS;product=lipoprotein;protein_id=WP_000976004.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3478617 3479135 . + . ID=gene3426;Name=SH03_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17165;old_locus_tag=SH03_17170 NZ_CP010441.1 Protein Homology CDS 3478617 3479135 . + 0 ID=cds3340;Parent=gene3426;Dbxref=Genbank:WP_001212391.1;Name=WP_001212391.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001212391.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3479128 3480351 . + . ID=gene3427;Name=SH03_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17170;old_locus_tag=SH03_17175 NZ_CP010441.1 Protein Homology CDS 3479128 3480351 . + 0 ID=cds3341;Parent=gene3427;Dbxref=Genbank:WP_001297662.1;Name=WP_001297662.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_001297662.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3480367 3480849 . + . ID=gene3428;Name=SH03_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17175;old_locus_tag=SH03_17180 NZ_CP010441.1 Protein Homology CDS 3480367 3480849 . + 0 ID=cds3342;Parent=gene3428;Dbxref=Genbank:WP_000589847.1;Name=WP_000589847.1;gbkey=CDS;product=OM lipoprotein positive effector of YfiN activity;protein_id=WP_000589847.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3480925 3481272 . - . ID=gene3429;Name=SH03_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17180;old_locus_tag=SH03_17185 NZ_CP010441.1 Protein Homology CDS 3480925 3481272 . - 0 ID=cds3343;Parent=gene3429;Dbxref=Genbank:WP_000065253.1;Name=WP_000065253.1;gbkey=CDS;product=50S ribosomal protein L19;protein_id=WP_000065253.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3481314 3482081 . - . ID=gene3430;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=SH03_RS17185;old_locus_tag=SH03_17190 NZ_CP010441.1 Protein Homology CDS 3481314 3482081 . - 0 ID=cds3344;Parent=gene3430;Dbxref=Genbank:WP_000264777.1;Name=WP_000264777.1;Note=methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA;gbkey=CDS;gene=trmD;product=tRNA (guanine-N(1)-)-methyltransferase;protein_id=WP_000264777.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3482112 3482660 . - . ID=gene3431;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=SH03_RS17190;old_locus_tag=SH03_17195 NZ_CP010441.1 Protein Homology CDS 3482112 3482660 . - 0 ID=cds3345;Parent=gene3431;Dbxref=Genbank:WP_000043335.1;Name=WP_000043335.1;Note=Essential for efficient processing of 16S rRNA;gbkey=CDS;gene=rimM;product=ribosome maturation factor RimM;protein_id=WP_000043335.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3482679 3482927 . - . ID=gene3432;Name=SH03_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17195;old_locus_tag=SH03_17200 NZ_CP010441.1 Protein Homology CDS 3482679 3482927 . - 0 ID=cds3346;Parent=gene3432;Dbxref=Genbank:WP_000256450.1;Name=WP_000256450.1;gbkey=CDS;product=30S ribosomal protein S16;protein_id=WP_000256450.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3483176 3484537 . - . ID=gene3433;Name=SH03_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17200;old_locus_tag=SH03_17205 NZ_CP010441.1 Protein Homology CDS 3483176 3484537 . - 0 ID=cds3347;Parent=gene3433;Dbxref=Genbank:WP_000460035.1;Name=WP_000460035.1;gbkey=CDS;product=signal recognition particle protein;protein_id=WP_000460035.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3484704 3485495 . + . ID=gene3434;Name=SH03_RS17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17205;old_locus_tag=SH03_17210 NZ_CP010441.1 Protein Homology CDS 3484704 3485495 . + 0 ID=cds3348;Parent=gene3434;Dbxref=Genbank:WP_001338897.1;Name=WP_001338897.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001338897.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3485561 3486802 . + . ID=gene3435;Name=SH03_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17210;old_locus_tag=SH03_17215 NZ_CP010441.1 Protein Homology CDS 3485561 3486802 . + 0 ID=cds3349;Parent=gene3435;Dbxref=Genbank:WP_001307349.1;Name=WP_001307349.1;gbkey=CDS;product=membrane protein;protein_id=WP_001307349.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3486857 3487450 . - . ID=gene3436;Name=SH03_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17215;old_locus_tag=SH03_17220 NZ_CP010441.1 Protein Homology CDS 3486857 3487450 . - 0 ID=cds3350;Parent=gene3436;Dbxref=Genbank:WP_001393454.1;Name=WP_001393454.1;Note=with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor;gbkey=CDS;product=protein GrpE;protein_id=WP_001393454.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3487447 3487611 . - . ID=gene3437;Name=SH03_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17220;old_locus_tag=SH03_17225 NZ_CP010441.1 Protein Homology CDS 3487447 3487611 . - 0 ID=cds3351;Parent=gene3437;Dbxref=Genbank:WP_001312029.1;Name=WP_001312029.1;gbkey=CDS;product=heat-shock protein;protein_id=WP_001312029.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3487573 3488451 . + . ID=gene3438;Name=ppnK;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;locus_tag=SH03_RS17225;old_locus_tag=SH03_17230 NZ_CP010441.1 Protein Homology CDS 3487573 3488451 . + 0 ID=cds3352;Parent=gene3438;Dbxref=Genbank:WP_001059169.1;Name=WP_001059169.1;Note=catalyzes the phosphorylation of NAD to NADP;gbkey=CDS;gene=ppnK;product=NAD kinase;protein_id=WP_001059169.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3488537 3490198 . + . ID=gene3439;Name=SH03_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17230;old_locus_tag=SH03_17235 NZ_CP010441.1 Protein Homology CDS 3488537 3490198 . + 0 ID=cds3353;Parent=gene3439;Dbxref=Genbank:WP_000880910.1;Name=WP_000880910.1;gbkey=CDS;product=DNA repair protein RecN;protein_id=WP_000880910.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3490347 3490688 . + . ID=gene3440;Name=SH03_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17235;old_locus_tag=SH03_17240 NZ_CP010441.1 Protein Homology CDS 3490347 3490688 . + 0 ID=cds3354;Parent=gene3440;Dbxref=Genbank:WP_001203437.1;Name=WP_001203437.1;gbkey=CDS;product=outer membrane protein assembly factor BamE;protein_id=WP_001203437.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3490750 3491040 . - . ID=gene3441;Name=SH03_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17240;old_locus_tag=SH03_17245 NZ_CP010441.1 Protein Homology CDS 3490750 3491040 . - 0 ID=cds3355;Parent=gene3441;Dbxref=Genbank:WP_001117838.1;Name=WP_001117838.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001117838.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3491030 3491506 . - . ID=gene3442;Name=SH03_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17245;old_locus_tag=SH03_17250 NZ_CP010441.1 Protein Homology CDS 3491030 3491506 . - 0 ID=cds3356;Parent=gene3442;Dbxref=Genbank:WP_000600189.1;Name=WP_000600189.1;gbkey=CDS;product=ribosome association toxin RatA;protein_id=WP_000600189.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3491638 3492120 . + . ID=gene3443;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=SH03_RS17250;old_locus_tag=SH03_17255 NZ_CP010441.1 Protein Homology CDS 3491638 3492120 . + 0 ID=cds3357;Parent=gene3443;Dbxref=Genbank:WP_000162574.1;Name=WP_000162574.1;Note=binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation;gbkey=CDS;gene=smpB;product=SsrA-binding protein;protein_id=WP_000162574.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3492901 3494142 . + . ID=gene3444;Name=SH03_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17255;old_locus_tag=SH03_17260 NZ_CP010441.1 Protein Homology CDS 3492901 3494142 . + 0 ID=cds3358;Parent=gene3444;Dbxref=Genbank:WP_000101723.1;Name=WP_000101723.1;gbkey=CDS;product=integrase;protein_id=WP_000101723.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3494386 3495261 . - . ID=gene3445;Name=SH03_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17260;old_locus_tag=SH03_17265 NZ_CP010441.1 Protein Homology CDS 3494386 3495261 . - 0 ID=cds3359;Parent=gene3445;Dbxref=Genbank:WP_023649320.1;Name=WP_023649320.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_023649320.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3495386 3495598 . + . ID=gene3446;Name=SH03_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17265;old_locus_tag=SH03_17270 NZ_CP010441.1 Protein Homology CDS 3495386 3495598 . + 0 ID=cds3360;Parent=gene3446;Dbxref=Genbank:WP_001065343.1;Name=WP_001065343.1;gbkey=CDS;product=regulator AlpA;protein_id=WP_001065343.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3495727 3497136 . + . ID=gene3447;Name=SH03_RS17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17270;old_locus_tag=SH03_17275 NZ_CP010441.1 Protein Homology CDS 3495727 3497136 . + 0 ID=cds3361;Parent=gene3447;Dbxref=Genbank:WP_000481742.1;Name=WP_000481742.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000481742.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 3496623 3496828 . + . ID=id185;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 3497289 3497915 . + . ID=gene3448;Name=SH03_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17275;old_locus_tag=SH03_17280 NZ_CP010441.1 Protein Homology CDS 3497289 3497915 . + 0 ID=cds3362;Parent=gene3448;Dbxref=Genbank:WP_000220524.1;Name=WP_000220524.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000220524.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3498093 3500282 . - . ID=gene3449;Name=SH03_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17280;old_locus_tag=SH03_17285 NZ_CP010441.1 Protein Homology CDS 3498093 3500282 . - 0 ID=cds3363;Parent=gene3449;Dbxref=Genbank:WP_000136402.1;Name=WP_000136402.1;gbkey=CDS;product=DEAD/DEAH box helicase;protein_id=WP_000136402.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3500279 3501895 . - . ID=gene3450;Name=SH03_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17285;old_locus_tag=SH03_17290 NZ_CP010441.1 Protein Homology CDS 3500279 3501895 . - 0 ID=cds3364;Parent=gene3450;Dbxref=Genbank:WP_000445380.1;Name=WP_000445380.1;gbkey=CDS;product=CP4-57 defective prophage%2C DUF4297/DUF1837 polymorphic toxin family protein;protein_id=WP_000445380.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3502255 3502518 . - . ID=gene3451;Name=SH03_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17290;old_locus_tag=SH03_17295 NZ_CP010441.1 Protein Homology CDS 3502255 3502518 . - 0 ID=cds3365;Parent=gene3451;Dbxref=Genbank:WP_000502050.1;Name=WP_000502050.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000502050.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3502660 3503733 . + . ID=gene3452;Name=SH03_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17295;old_locus_tag=SH03_17300 NZ_CP010441.1 Protein Homology CDS 3502660 3503733 . + 0 ID=cds3366;Parent=gene3452;Dbxref=Genbank:WP_000155570.1;Name=WP_000155570.1;gbkey=CDS;product=mRNA endoribonuclease LS;protein_id=WP_000155570.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3503726 3504097 . + . ID=gene3453;Name=SH03_RS17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17300;old_locus_tag=SH03_17305 NZ_CP010441.1 Protein Homology CDS 3503726 3504097 . + 0 ID=cds3367;Parent=gene3453;Dbxref=Genbank:WP_000461704.1;Name=WP_000461704.1;gbkey=CDS;product=antitoxin RnlB;protein_id=WP_000461704.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3504452 3505315 . + . ID=gene3454;Name=SH03_RS17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17305;old_locus_tag=SH03_17310 NZ_CP010441.1 Protein Homology CDS 3504452 3505315 . + 0 ID=cds3368;Parent=gene3454;Dbxref=Genbank:WP_000787597.1;Name=WP_000787597.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000787597.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3505407 3506228 . + . ID=gene3455;Name=SH03_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17310;old_locus_tag=SH03_17315 NZ_CP010441.1 Protein Homology CDS 3505407 3506228 . + 0 ID=cds3369;Parent=gene3455;Dbxref=Genbank:WP_000197391.1;Name=WP_000197391.1;gbkey=CDS;product=UPF0380 protein YfjQ;protein_id=WP_000197391.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3506445 3507146 . + . ID=gene3456;Name=SH03_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17315;old_locus_tag=SH03_17320 NZ_CP010441.1 Protein Homology CDS 3506445 3507146 . + 0 ID=cds3370;Parent=gene3456;Dbxref=Genbank:WP_000189409.1;Name=WP_000189409.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000189409.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3507187 3507423 . + . ID=gene3457;Name=SH03_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17320;old_locus_tag=SH03_17325 NZ_CP010441.1 Protein Homology CDS 3507187 3507423 . + 0 ID=cds3371;Parent=gene3457;Dbxref=Genbank:WP_001144029.1;Name=WP_001144029.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001144029.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3507423 3507866 . + . ID=gene3458;Name=SH03_RS17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17325;old_locus_tag=SH03_17330 NZ_CP010441.1 Protein Homology CDS 3507423 3507866 . + 0 ID=cds3372;Parent=gene3458;Dbxref=Genbank:WP_000824222.1;Name=WP_000824222.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000824222.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3507890 3508357 . + . ID=gene3459;Name=SH03_RS17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17330;old_locus_tag=SH03_17335 NZ_CP010441.1 Protein Homology CDS 3507890 3508357 . + 0 ID=cds3373;Parent=gene3459;Dbxref=Genbank:WP_000702495.1;Name=WP_000702495.1;gbkey=CDS;product=periplasmic protein;protein_id=WP_000702495.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3508582 3508896 . - . ID=gene3460;Name=SH03_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17335;old_locus_tag=SH03_17340 NZ_CP010441.1 Protein Homology CDS 3508582 3508896 . - 0 ID=cds3374;Parent=gene3460;Dbxref=Genbank:WP_000065803.1;Name=WP_000065803.1;gbkey=CDS;product=arsenate reductase;protein_id=WP_000065803.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3508909 3509924 . - . ID=gene3461;Name=SH03_RS17340;end_range=3509924,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS17340;partial=true;pseudo=true NZ_CP010441.1 Protein Homology CDS 3508909 3509924 . - 0 ID=cds3375;Parent=gene3461;end_range=3509924,.;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=arsenic transporter;pseudo=true;transl_except=(pos:complement(3509578..3509580)%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq gene 3510060 3511763 . + . ID=gene3462;Name=SH03_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17345;old_locus_tag=SH03_17350 NZ_CP010441.1 Protein Homology CDS 3510060 3511763 . + 0 ID=cds3376;Parent=gene3462;Dbxref=Genbank:WP_000896263.1;Name=WP_000896263.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000896263.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3512661 3513119 . + . ID=gene3463;Name=SH03_RS17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17350;old_locus_tag=SH03_17355 NZ_CP010441.1 Protein Homology CDS 3512661 3513119 . + 0 ID=cds3377;Parent=gene3463;Dbxref=Genbank:WP_000211841.1;Name=WP_000211841.1;gbkey=CDS;product=antirestriction protein;protein_id=WP_000211841.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3513128 3513610 . + . ID=gene3464;Name=SH03_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17355;old_locus_tag=SH03_17360 NZ_CP010441.1 Protein Homology CDS 3513128 3513610 . + 0 ID=cds3378;Parent=gene3464;Dbxref=Genbank:WP_001407480.1;Name=WP_001407480.1;gbkey=CDS;product=DNA repair protein;protein_id=WP_001407480.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3513857 3514174 . + . ID=gene3465;Name=SH03_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17360;old_locus_tag=SH03_17365 NZ_CP010441.1 Protein Homology CDS 3513857 3514174 . + 0 ID=cds3379;Parent=gene3465;Dbxref=Genbank:WP_000072690.1;Name=WP_000072690.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000072690.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3514195 3514524 . + . ID=gene3466;Name=SH03_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17365;old_locus_tag=SH03_17370 NZ_CP010441.1 Protein Homology CDS 3514195 3514524 . + 0 ID=cds3380;Parent=gene3466;Dbxref=Genbank:WP_001094400.1;Name=WP_001094400.1;gbkey=CDS;product=toxin YpjF;protein_id=WP_001094400.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 3514878 3515232 . + . ID=id186;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 3514888 3515100 . - . ID=gene3467;Name=SH03_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17370;old_locus_tag=SH03_17375 NZ_CP010441.1 Protein Homology CDS 3514888 3515100 . - 0 ID=cds3381;Parent=gene3467;Dbxref=Genbank:WP_001300493.1;Name=WP_001300493.1;gbkey=CDS;product=ATPase;protein_id=WP_001300493.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3519807 3519950 . - . ID=gene3468;Name=SH03_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17380;old_locus_tag=SH03_17385 NZ_CP010441.1 Protein Homology CDS 3519807 3519950 . - 0 ID=cds3382;Parent=gene3468;Dbxref=Genbank:WP_000264670.1;Name=WP_000264670.1;gbkey=CDS;product=DNA invertase;protein_id=WP_000264670.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3520380 3521171 . - . ID=gene3469;Name=SH03_RS17385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17385;old_locus_tag=SH03_17390 NZ_CP010441.1 Protein Homology CDS 3520380 3521171 . - 0 ID=cds3383;Parent=gene3469;Dbxref=Genbank:WP_000445897.1;Name=WP_000445897.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000445897.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3521271 3521753 . - . ID=gene3470;Name=SH03_RS17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17390;old_locus_tag=SH03_17395 NZ_CP010441.1 Protein Homology CDS 3521271 3521753 . - 0 ID=cds3384;Parent=gene3470;Dbxref=Genbank:WP_000961356.1;Name=WP_000961356.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000961356.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3522504 3522579 . - . ID=gene3471;Name=SH03_RS17400;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS17400;old_locus_tag=SH03_17405 NZ_CP010441.1 tRNAscan-SE tRNA 3522504 3522579 . - . ID=rna86;Parent=gene3471;anticodon=(pos:complement(3522544..3522546));gbkey=tRNA;product=tRNA-Met NZ_CP010441.1 tRNAscan-SE exon 3522504 3522579 . - . ID=id187;Parent=rna86;anticodon=(pos:complement(3522544..3522546));gbkey=tRNA;product=tRNA-Met NZ_CP010441.1 RefSeq gene 3523490 3524176 . + . ID=gene3472;Name=SH03_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17405;old_locus_tag=SH03_17410 NZ_CP010441.1 Protein Homology CDS 3523490 3524176 . + 0 ID=cds3385;Parent=gene3472;Dbxref=Genbank:WP_000572607.1;Name=WP_000572607.1;gbkey=CDS;product=alpha-1%2C2-mannosidase;protein_id=WP_000572607.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3524189 3524980 . + . ID=gene3473;Name=SH03_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17410;old_locus_tag=SH03_17415 NZ_CP010441.1 Protein Homology CDS 3524189 3524980 . + 0 ID=cds3386;Parent=gene3473;Dbxref=Genbank:WP_000611977.1;Name=WP_000611977.1;gbkey=CDS;product=alpha-amylase;protein_id=WP_000611977.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3525119 3525391 . + . ID=gene3474;Name=SH03_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17415;old_locus_tag=SH03_17420 NZ_CP010441.1 Protein Homology CDS 3525119 3525391 . + 0 ID=cds3387;Parent=gene3474;Dbxref=Genbank:WP_001326686.1;Name=WP_001326686.1;gbkey=CDS;product=alpha-amylase;protein_id=WP_001326686.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3525727 3526704 . + . ID=gene3475;Name=SH03_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17420;old_locus_tag=SH03_17425 NZ_CP010441.1 Protein Homology CDS 3525727 3526704 . + 0 ID=cds3388;Parent=gene3475;Dbxref=Genbank:WP_000993126.1;Name=WP_000993126.1;Note=in Escherichia coli this gene is induced by carbon starvation and depends on sigma S and cAMP-CRP%3B the structure of the Gab protein shows it is a member of non-heme iron (II)-dependent oxygenase superfamily which includes clavamini acid synthases%3B forms homotetramers in solution;gbkey=CDS;product=protein CsiD;protein_id=WP_000993126.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3526724 3527992 . + . ID=gene3476;Name=SH03_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17425;old_locus_tag=SH03_17430 NZ_CP010441.1 Protein Homology CDS 3526724 3527992 . + 0 ID=cds3389;Parent=gene3476;Dbxref=Genbank:WP_000271909.1;Name=WP_000271909.1;Note=catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate;gbkey=CDS;product=L-2-hydroxyglutarate oxidase LhgO;protein_id=WP_000271909.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3528015 3529463 . + . ID=gene3477;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=SH03_RS17430;old_locus_tag=SH03_17435 NZ_CP010441.1 Protein Homology CDS 3528015 3529463 . + 0 ID=cds3390;Parent=gene3477;Dbxref=Genbank:WP_000772831.1;Name=WP_000772831.1;Note=catalyzes the formation of succinate from succinate semialdehyde%3B NADP dependent;gbkey=CDS;gene=gabD;product=succinate-semialdehyde dehydrogenase [NADP+];protein_id=WP_000772831.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3529477 3530757 . + . ID=gene3478;Name=SH03_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17435;old_locus_tag=SH03_17440 NZ_CP010441.1 Protein Homology CDS 3529477 3530757 . + 0 ID=cds3391;Parent=gene3478;Dbxref=Genbank:WP_001087611.1;Name=WP_001087611.1;gbkey=CDS;product=4-aminobutyrate aminotransferase GabT;protein_id=WP_001087611.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3530995 3532395 . + . ID=gene3479;Name=SH03_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17440;old_locus_tag=SH03_17445 NZ_CP010441.1 Protein Homology CDS 3530995 3532395 . + 0 ID=cds3392;Parent=gene3479;Dbxref=Genbank:WP_001295173.1;Name=WP_001295173.1;gbkey=CDS;product=GABA permease;protein_id=WP_001295173.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3532416 3533078 . + . ID=gene3480;Name=SH03_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17445;old_locus_tag=SH03_17450 NZ_CP010441.1 Protein Homology CDS 3532416 3533078 . + 0 ID=cds3393;Parent=gene3480;Dbxref=Genbank:WP_000156811.1;Name=WP_000156811.1;Note=regulator of gab gene expression;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000156811.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3533079 3533528 . - . ID=gene3481;Name=SH03_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17450;old_locus_tag=SH03_17455 NZ_CP010441.1 Protein Homology CDS 3533079 3533528 . - 0 ID=cds3394;Parent=gene3481;Dbxref=Genbank:WP_000522415.1;Name=WP_000522415.1;gbkey=CDS;product=peptidoglycan-binding protein LysM;protein_id=WP_000522415.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3533612 3533770 . - . ID=gene3482;Name=SH03_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17455;old_locus_tag=SH03_17460 NZ_CP010441.1 Protein Homology CDS 3533612 3533770 . - 0 ID=cds3395;Parent=gene3482;Dbxref=Genbank:WP_000508177.1;Name=WP_000508177.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000508177.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3533953 3534252 . + . ID=gene3483;Name=SH03_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17460;old_locus_tag=SH03_17465 NZ_CP010441.1 Protein Homology CDS 3533953 3534252 . + 0 ID=cds3396;Parent=gene3483;Dbxref=Genbank:WP_000137280.1;Name=WP_000137280.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000137280.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3534262 3534786 . + . ID=gene3484;Name=SH03_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17465;old_locus_tag=SH03_17470 NZ_CP010441.1 Protein Homology CDS 3534262 3534786 . + 0 ID=cds3397;Parent=gene3484;Dbxref=Genbank:WP_001229442.1;Name=WP_001229442.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001229442.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3534833 3535237 . - . ID=gene3485;Name=SH03_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17470;old_locus_tag=SH03_17475 NZ_CP010441.1 Protein Homology CDS 3534833 3535237 . - 0 ID=cds3398;Parent=gene3485;Dbxref=Genbank:WP_000115383.1;Name=WP_000115383.1;gbkey=CDS;product=DNA-binding protein StpA;protein_id=WP_000115383.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3535906 3536355 . + . ID=gene3486;Name=SH03_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17475;old_locus_tag=SH03_17480 NZ_CP010441.1 Protein Homology CDS 3535906 3536355 . + 0 ID=cds3399;Parent=gene3486;Dbxref=Genbank:WP_000492656.1;Name=WP_000492656.1;gbkey=CDS;product=L-alanine exporter AlaE;protein_id=WP_000492656.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3536392 3536736 . - . ID=gene3487;Name=SH03_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17480;old_locus_tag=SH03_17485 NZ_CP010441.1 Protein Homology CDS 3536392 3536736 . - 0 ID=cds3400;Parent=gene3487;Dbxref=Genbank:WP_000281320.1;Name=WP_000281320.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000281320.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3536888 3537217 . + . ID=gene3488;Name=SH03_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17485;old_locus_tag=SH03_17490 NZ_CP010441.1 Protein Homology CDS 3536888 3537217 . + 0 ID=cds3401;Parent=gene3488;Dbxref=Genbank:WP_001295174.1;Name=WP_001295174.1;gbkey=CDS;product=DUF883 domain-containing protein;protein_id=WP_001295174.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3537465 3537710 . + . ID=gene3489;Name=SH03_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17490;old_locus_tag=SH03_17495 NZ_CP010441.1 Protein Homology CDS 3537465 3537710 . + 0 ID=cds3402;Parent=gene3489;Dbxref=Genbank:WP_001223227.1;Name=WP_001223227.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_001223227.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3537707 3538117 . + . ID=gene3490;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=SH03_RS17495;old_locus_tag=SH03_17500 NZ_CP010441.1 Protein Homology CDS 3537707 3538117 . + 0 ID=cds3403;Parent=gene3490;Dbxref=Genbank:WP_000080947.1;Name=WP_000080947.1;Note=in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF;gbkey=CDS;gene=nrdI;product=protein NrdI;protein_id=WP_000080947.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3538090 3540234 . + . ID=gene3491;Name=SH03_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17500;old_locus_tag=SH03_17505 NZ_CP010441.1 Protein Homology CDS 3538090 3540234 . + 0 ID=cds3404;Parent=gene3491;Dbxref=Genbank:WP_000246534.1;Name=WP_000246534.1;gbkey=CDS;product=ribonucleoside-diphosphate reductase 2 subunit alpha;protein_id=WP_000246534.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3540244 3541203 . + . ID=gene3492;Name=SH03_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17505;old_locus_tag=SH03_17510 NZ_CP010441.1 Protein Homology CDS 3540244 3541203 . + 0 ID=cds3405;Parent=gene3492;Dbxref=Genbank:WP_000777963.1;Name=WP_000777963.1;Note=B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_000777963.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3541557 3542759 . + . ID=gene3493;Name=SH03_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17510;old_locus_tag=SH03_17515 NZ_CP010441.1 Protein Homology CDS 3541557 3542759 . + 0 ID=cds3406;Parent=gene3493;Dbxref=Genbank:WP_000985494.1;Name=WP_000985494.1;Note=with ProWX is involved in the high-affinity uptake of glycine betaine;gbkey=CDS;product=glycine/betaine ABC transporter ATP-binding protein;protein_id=WP_000985494.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3542752 3543816 . + . ID=gene3494;Name=SH03_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17515;old_locus_tag=SH03_17520 NZ_CP010441.1 Protein Homology CDS 3542752 3543816 . + 0 ID=cds3407;Parent=gene3494;Dbxref=Genbank:WP_000774988.1;Name=WP_000774988.1;Note=with ProVX is involved in the high-affinity uptake of glycine betaine;gbkey=CDS;product=glycine/betaine ABC transporter permease;protein_id=WP_000774988.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3543874 3544866 . + . ID=gene3495;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=SH03_RS17520;old_locus_tag=SH03_17525 NZ_CP010441.1 Protein Homology CDS 3543874 3544866 . + 0 ID=cds3408;Parent=gene3495;Dbxref=Genbank:WP_001216525.1;Name=WP_001216525.1;Note=with ProVW%2C part of the high-affinity transport system for the osmoprotectant glycine betaine;gbkey=CDS;gene=proX;product=glycine/betaine ABC transporter substrate-binding protein;protein_id=WP_001216525.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3545058 3546235 . + . ID=gene3496;Name=SH03_RS17525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS17525;pseudo=true NZ_CP010441.1 Protein Homology CDS 3545058 3546235 . + 0 ID=cds3409;Parent=gene3496;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transporter;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 3546359 3547096 . + . ID=gene3497;Name=SH03_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17530;old_locus_tag=SH03_17535 NZ_CP010441.1 Protein Homology CDS 3546359 3547096 . + 0 ID=cds3410;Parent=gene3497;Dbxref=Genbank:WP_000445651.1;Name=WP_000445651.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000445651.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3547086 3547421 . + . ID=gene3498;Name=SH03_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17535;old_locus_tag=SH03_17540 NZ_CP010441.1 Protein Homology CDS 3547086 3547421 . + 0 ID=cds3411;Parent=gene3498;Dbxref=Genbank:WP_000119763.1;Name=WP_000119763.1;gbkey=CDS;product=L-valine exporter%2C norvaline resistance protein;protein_id=WP_000119763.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3547512 3548042 . + . ID=gene3499;Name=SH03_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17540;old_locus_tag=SH03_17545 NZ_CP010441.1 Protein Homology CDS 3547512 3548042 . + 0 ID=cds3412;Parent=gene3499;Dbxref=Genbank:WP_000378442.1;Name=WP_000378442.1;Note=DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux%3B negative regulator of the multidrug operon emrAB;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000378442.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3548169 3549341 . + . ID=gene3500;Name=SH03_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17545;old_locus_tag=SH03_17550 NZ_CP010441.1 Protein Homology CDS 3548169 3549341 . + 0 ID=cds3413;Parent=gene3500;Dbxref=Genbank:WP_001326681.1;Name=WP_001326681.1;Note=with ErmA and TolC forms a multidrug efflux system;gbkey=CDS;product=multidrug export protein EmrA;protein_id=WP_001326681.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3549358 3550896 . + . ID=gene3501;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=SH03_RS17550;old_locus_tag=SH03_17555 NZ_CP010441.1 Protein Homology CDS 3549358 3550896 . + 0 ID=cds3414;Parent=gene3501;Dbxref=Genbank:WP_001295176.1;Name=WP_001295176.1;Note=multidrug MFS transporte%3B with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid;gbkey=CDS;gene=emrB;product=multidrug effux MFS transporter subunit EmrB;protein_id=WP_001295176.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3550960 3551475 . - . ID=gene3502;Name=SH03_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17555;old_locus_tag=SH03_17560 NZ_CP010441.1 Protein Homology CDS 3550960 3551475 . - 0 ID=cds3415;Parent=gene3502;Dbxref=Genbank:WP_001130211.1;Name=WP_001130211.1;Note=catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2;gbkey=CDS;product=S-ribosylhomocysteine lyase;protein_id=WP_001130211.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3551625 3553181 . - . ID=gene3503;Name=SH03_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17560;old_locus_tag=SH03_17565 NZ_CP010441.1 Protein Homology CDS 3551625 3553181 . - 0 ID=cds3416;Parent=gene3503;Dbxref=Genbank:WP_000611804.1;Name=WP_000611804.1;Note=involved in the first step of glutathione biosynthesis;gbkey=CDS;product=glutamate--cysteine ligase;protein_id=WP_000611804.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3553254 3553682 . - . ID=gene3504;Name=SH03_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17565;old_locus_tag=SH03_17570 NZ_CP010441.1 Protein Homology CDS 3553254 3553682 . - 0 ID=cds3417;Parent=gene3504;Dbxref=Genbank:WP_001287454.1;Name=WP_001287454.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001287454.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3553679 3554245 . - . ID=gene3505;Name=SH03_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17570;old_locus_tag=SH03_17575 NZ_CP010441.1 Protein Homology CDS 3553679 3554245 . - 0 ID=cds3418;Parent=gene3505;Dbxref=Genbank:WP_000273290.1;Name=WP_000273290.1;Note=YqaB%3B catalyzes the dephosphorylation of fructose 1-phosphate%2C 6-phosphogluconate and p-nitrophenyl phosphate (pNPP)%3B presents beta-phosphoglucomutase activity at a lower extent;gbkey=CDS;product=fructose-1-phosphate phosphatase YqaB;protein_id=WP_000273290.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3554526 3554602 . - . ID=gene3506;Name=SH03_RS17580;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS17580;old_locus_tag=SH03_17585 NZ_CP010441.1 tRNAscan-SE tRNA 3554526 3554602 . - . ID=rna87;Parent=gene3506;anticodon=(pos:complement(3554566..3554568));gbkey=tRNA;product=tRNA-Arg NZ_CP010441.1 tRNAscan-SE exon 3554526 3554602 . - . ID=id188;Parent=rna87;anticodon=(pos:complement(3554566..3554568));gbkey=tRNA;product=tRNA-Arg NZ_CP010441.1 RefSeq repeat_region 3554800 3555099 . + . ID=id189;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 3554801 3554877 . - . ID=gene3507;Name=SH03_RS17585;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS17585;old_locus_tag=SH03_17590 NZ_CP010441.1 tRNAscan-SE tRNA 3554801 3554877 . - . ID=rna88;Parent=gene3507;anticodon=(pos:complement(3554841..3554843));gbkey=tRNA;product=tRNA-Arg NZ_CP010441.1 tRNAscan-SE exon 3554801 3554877 . - . ID=id190;Parent=rna88;anticodon=(pos:complement(3554841..3554843));gbkey=tRNA;product=tRNA-Arg NZ_CP010441.1 RefSeq gene 3554940 3555016 . - . ID=gene3508;Name=SH03_RS17590;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS17590;old_locus_tag=SH03_17595 NZ_CP010441.1 tRNAscan-SE tRNA 3554940 3555016 . - . ID=rna89;Parent=gene3508;anticodon=(pos:complement(3554980..3554982));gbkey=tRNA;product=tRNA-Arg NZ_CP010441.1 tRNAscan-SE exon 3554940 3555016 . - . ID=id191;Parent=rna89;anticodon=(pos:complement(3554980..3554982));gbkey=tRNA;product=tRNA-Arg NZ_CP010441.1 RefSeq gene 3555215 3555291 . - . ID=gene3509;Name=SH03_RS17595;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS17595;old_locus_tag=SH03_17600 NZ_CP010441.1 tRNAscan-SE tRNA 3555215 3555291 . - . ID=rna90;Parent=gene3509;anticodon=(pos:complement(3555255..3555257));gbkey=tRNA;product=tRNA-Arg NZ_CP010441.1 tRNAscan-SE exon 3555215 3555291 . - . ID=id192;Parent=rna90;anticodon=(pos:complement(3555255..3555257));gbkey=tRNA;product=tRNA-Arg NZ_CP010441.1 RefSeq gene 3555295 3555387 . - . ID=gene3510;Name=SH03_RS17600;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS17600;old_locus_tag=SH03_17605 NZ_CP010441.1 tRNAscan-SE tRNA 3555295 3555387 . - . ID=rna91;Parent=gene3510;anticodon=(pos:complement(3555351..3555353));gbkey=tRNA;product=tRNA-Ser NZ_CP010441.1 tRNAscan-SE exon 3555295 3555387 . - . ID=id193;Parent=rna91;anticodon=(pos:complement(3555351..3555353));gbkey=tRNA;product=tRNA-Ser NZ_CP010441.1 RefSeq gene 3555703 3555888 . - . ID=gene3511;Name=SH03_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17605;old_locus_tag=SH03_17610 NZ_CP010441.1 Protein Homology CDS 3555703 3555888 . - 0 ID=cds3419;Parent=gene3511;Dbxref=Genbank:WP_000906486.1;Name=WP_000906486.1;Note=affects carbohydrate metabolism%3B has regulatory role in many processes;gbkey=CDS;product=pleiotropic regulatory protein for carbon source metabolism;protein_id=WP_000906486.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3556123 3558753 . - . ID=gene3512;Name=SH03_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17610;old_locus_tag=SH03_17615 NZ_CP010441.1 Protein Homology CDS 3556123 3558753 . - 0 ID=cds3420;Parent=gene3512;Dbxref=Genbank:WP_000047184.1;Name=WP_000047184.1;gbkey=CDS;product=alanine--tRNA ligase;protein_id=WP_000047184.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3558691 3558840 . + . ID=gene3513;Name=SH03_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17615;old_locus_tag=SH03_17620 NZ_CP010441.1 Protein Homology CDS 3558691 3558840 . + 0 ID=cds3421;Parent=gene3513;Dbxref=Genbank:WP_001307965.1;Name=WP_001307965.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001307965.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3558881 3559381 . - . ID=gene3514;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=SH03_RS17620;old_locus_tag=SH03_17625 NZ_CP010441.1 Protein Homology CDS 3558881 3559381 . - 0 ID=cds3422;Parent=gene3514;Dbxref=Genbank:WP_000140508.1;Name=WP_000140508.1;Note=binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities;gbkey=CDS;gene=recX;product=regulatory protein RecX;protein_id=WP_000140508.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3559603 3559787 . - . ID=gene3515;Name=SH03_RS17625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS17625;pseudo=true NZ_CP010441.1 Protein Homology CDS 3559603 3559787 . - 0 ID=cds3423;Parent=gene3515;exception=annotated by transcript or proteomic data;gbkey=CDS;product=cruciferin;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 3559905 3560051 . - . ID=gene3516;Name=SH03_RS17630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS17630;partial=true;pseudo=true;start_range=.,3559905 NZ_CP010441.1 Protein Homology CDS 3559905 3560051 . - 0 ID=cds3424;Parent=gene3516;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3559905;transl_table=11 NZ_CP010441.1 RefSeq gene 3560105 3560764 . + . ID=gene3517;Name=SH03_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17635;old_locus_tag=SH03_17645 NZ_CP010441.1 Protein Homology CDS 3560105 3560764 . + 0 ID=cds3425;Parent=gene3517;Dbxref=Genbank:WP_006286297.1;Name=WP_006286297.1;gbkey=CDS;product=chloramphenicol acetyltransferase CAT;protein_id=WP_006286297.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3560930 3561427 . - . ID=gene3518;Name=SH03_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17640;old_locus_tag=SH03_17650 NZ_CP010441.1 Protein Homology CDS 3560930 3561427 . - 0 ID=cds3426;Parent=gene3518;Dbxref=Genbank:WP_000132231.1;Name=WP_000132231.1;gbkey=CDS;product=nicotinamide-nucleotide amidohydrolase PncC;protein_id=WP_000132231.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3561572 3562657 . - . ID=gene3519;Name=SH03_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17645;old_locus_tag=SH03_17655 NZ_CP010441.1 Protein Homology CDS 3561572 3562657 . - 0 ID=cds3427;Parent=gene3519;Dbxref=Genbank:WP_001295177.1;Name=WP_001295177.1;Note=membrane-bound lytic murein transglycosylase B%3B catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan;gbkey=CDS;product=murein transglycosylase;protein_id=WP_001295177.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3562913 3563476 . + . ID=gene3520;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=SH03_RS17650;old_locus_tag=SH03_17660 NZ_CP010441.1 Protein Homology CDS 3562913 3563476 . + 0 ID=cds3428;Parent=gene3520;Dbxref=Genbank:WP_000573321.1;Name=WP_000573321.1;Note=catalyzes the phosphorylation of incoming sugar substrates along with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site;gbkey=CDS;gene=srlA;product=glucitol/sorbitol permease IIC component;protein_id=WP_000573321.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3563473 3564432 . + . ID=gene3521;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=SH03_RS17655;old_locus_tag=SH03_17665 NZ_CP010441.1 Protein Homology CDS 3563473 3564432 . + 0 ID=cds3429;Parent=gene3521;Dbxref=Genbank:WP_000148878.1;Name=WP_000148878.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIB transfers the phosphoryl group to the substrate;gbkey=CDS;gene=srlE;product=glucitol/sorbitol-specific phosphotransferase enzyme IIB component;protein_id=WP_000148878.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3564443 3564814 . + . ID=gene3522;Name=SH03_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17660;old_locus_tag=SH03_17670 NZ_CP010441.1 Protein Homology CDS 3564443 3564814 . + 0 ID=cds3430;Parent=gene3522;Dbxref=Genbank:WP_000216194.1;Name=WP_000216194.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=glucitol/sorbitol-specific phosphotransferase enzyme IIA component;protein_id=WP_000216194.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3564818 3565597 . + . ID=gene3523;Name=SH03_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17665;old_locus_tag=SH03_17675 NZ_CP010441.1 Protein Homology CDS 3564818 3565597 . + 0 ID=cds3431;Parent=gene3523;Dbxref=Genbank:WP_001077358.1;Name=WP_001077358.1;Note=catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate;gbkey=CDS;product=sorbitol-6-phosphate 2-dehydrogenase;protein_id=WP_001077358.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3565702 3566061 . + . ID=gene3524;Name=SH03_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17670;old_locus_tag=SH03_17680 NZ_CP010441.1 Protein Homology CDS 3565702 3566061 . + 0 ID=cds3432;Parent=gene3524;Dbxref=Genbank:WP_000252908.1;Name=WP_000252908.1;Note=regulator for glucitol utilization;gbkey=CDS;product=glucitol operon activator protein;protein_id=WP_000252908.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3566128 3566901 . + . ID=gene3525;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=SH03_RS17675;old_locus_tag=SH03_17685 NZ_CP010441.1 Protein Homology CDS 3566128 3566901 . + 0 ID=cds3433;Parent=gene3525;Dbxref=Genbank:WP_000804550.1;Name=WP_000804550.1;Note=regulates genes involved in glucitol utilization;gbkey=CDS;gene=srlR;product=glucitol operon repressor;protein_id=WP_000804550.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3566894 3567859 . + . ID=gene3526;Name=SH03_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17680;old_locus_tag=SH03_17690 NZ_CP010441.1 Protein Homology CDS 3566894 3567859 . + 0 ID=cds3434;Parent=gene3526;Dbxref=Genbank:WP_001287420.1;Name=WP_001287420.1;gbkey=CDS;product=arabinose 5-phosphate isomerase GutQ;protein_id=WP_001287420.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3567856 3569370 . - . ID=gene3527;Name=SH03_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17685;old_locus_tag=SH03_17695 NZ_CP010441.1 Protein Homology CDS 3567856 3569370 . - 0 ID=cds3435;Parent=gene3527;Dbxref=Genbank:WP_000010749.1;Name=WP_000010749.1;Note=Required for the expression of anaerobic nitric oxide (NO) reductase%3B acts as a transcriptional activator for the norVW operon;gbkey=CDS;product=NorR family transcriptional regulator;protein_id=WP_000010749.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3569557 3570996 . + . ID=gene3528;Name=SH03_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17690;old_locus_tag=SH03_17700 NZ_CP010441.1 Protein Homology CDS 3569557 3570996 . + 0 ID=cds3436;Parent=gene3528;Dbxref=Genbank:WP_000029634.1;Name=WP_000029634.1;Note=detoxifies nitric oxide using NADH;gbkey=CDS;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_000029634.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3570993 3572126 . + . ID=gene3529;Name=SH03_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17695;old_locus_tag=SH03_17705 NZ_CP010441.1 Protein Homology CDS 3570993 3572126 . + 0 ID=cds3437;Parent=gene3529;Dbxref=Genbank:WP_000064752.1;Name=WP_000064752.1;gbkey=CDS;product=nitric oxide reductase FlRd-NAD+ reductase;protein_id=WP_000064752.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3572254 3574506 . - . ID=gene3530;Name=SH03_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17700;old_locus_tag=SH03_17710 NZ_CP010441.1 Protein Homology CDS 3572254 3574506 . - 0 ID=cds3438;Parent=gene3530;Dbxref=Genbank:WP_001107704.1;Name=WP_001107704.1;Note=carbamoyltransferase%3B involved in the formation of the cyanate group of hydrogenase%3B catalyzes the formation of carbamoyladenylate from carbamoylphosphate and then transfers the carbamoyl group to HypE;gbkey=CDS;product=hydrogenase maturation protein HypF;protein_id=WP_001107704.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3574659 3575186 . - . ID=gene3531;Name=SH03_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17705;old_locus_tag=SH03_17715 NZ_CP010441.1 Protein Homology CDS 3574659 3575186 . - 0 ID=cds3439;Parent=gene3531;Dbxref=Genbank:WP_001078777.1;Name=WP_001078777.1;Note=involved in electron transport from formate to hydrogen;gbkey=CDS;product=electron transporter HydN;protein_id=WP_001078777.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3575335 3576345 . - . ID=gene3532;Name=SH03_RS17710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17710;old_locus_tag=SH03_17720 NZ_CP010441.1 Protein Homology CDS 3575335 3576345 . - 0 ID=cds3440;Parent=gene3532;Dbxref=Genbank:WP_001394680.1;Name=WP_001394680.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001394680.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3576605 3578062 . + . ID=gene3533;Name=SH03_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17715;old_locus_tag=SH03_17725 NZ_CP010441.1 Protein Homology CDS 3576605 3578062 . + 0 ID=cds3441;Parent=gene3533;Dbxref=Genbank:WP_001107828.1;Name=WP_001107828.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS arbutin-%2C cellobiose-%2C and salicin EIIBC component;protein_id=WP_001107828.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3578071 3579495 . + . ID=gene3534;Name=SH03_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17720;old_locus_tag=SH03_17730 NZ_CP010441.1 Protein Homology CDS 3578071 3579495 . + 0 ID=cds3442;Parent=gene3534;Dbxref=Genbank:WP_046377556.1;Name=WP_046377556.1;gbkey=CDS;product=6-phospho-beta-glucosidase;protein_id=WP_046377556.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3579654 3580124 . - . ID=gene3535;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=SH03_RS17725;old_locus_tag=SH03_17735 NZ_CP010441.1 Protein Homology CDS 3579654 3580124 . - 0 ID=cds3443;Parent=gene3535;Dbxref=Genbank:WP_000132961.1;Name=WP_000132961.1;Note=involved in the C-terminal processing of the large subunit of hydrogenase 3 HycE;gbkey=CDS;gene=hycI;product=hydrogenase 3 maturation protease;protein_id=WP_000132961.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3580117 3580527 . - . ID=gene3536;Name=SH03_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17730;old_locus_tag=SH03_17740 NZ_CP010441.1 Protein Homology CDS 3580117 3580527 . - 0 ID=cds3444;Parent=gene3536;Dbxref=Genbank:WP_001291921.1;Name=WP_001291921.1;Note=required for the maturation of the formate hydrogenlyase complex;gbkey=CDS;product=formate hydrogenlyase maturation protein HycH;protein_id=WP_001291921.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3580524 3581291 . - . ID=gene3537;Name=SH03_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17735;old_locus_tag=SH03_17745 NZ_CP010441.1 Protein Homology CDS 3580524 3581291 . - 0 ID=cds3445;Parent=gene3537;Dbxref=Genbank:WP_000067392.1;Name=WP_000067392.1;gbkey=CDS;product=formate hydrogenlyase subunit 7;protein_id=WP_000067392.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3581291 3581833 . - . ID=gene3538;Name=SH03_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17740;old_locus_tag=SH03_17750 NZ_CP010441.1 Protein Homology CDS 3581291 3581833 . - 0 ID=cds3446;Parent=gene3538;Dbxref=Genbank:WP_000493781.1;Name=WP_000493781.1;Note=electron transfer protein for hydrogenase-3%3B the formate hydrogenlyase complex comprises of a formate dehydrogenase%2C unidentified electron carriers and hydrogenase-3%3B in this non-energy conserving pathway%2C molecular hydrogen and carbodioxide are released from formate;gbkey=CDS;product=formate hydrogenlyase subunit 6;protein_id=WP_000493781.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3581843 3583552 . - . ID=gene3539;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=SH03_RS17745;old_locus_tag=SH03_17755 NZ_CP010441.1 Protein Homology CDS 3581843 3583552 . - 0 ID=cds3447;Parent=gene3539;Dbxref=Genbank:WP_001288122.1;Name=WP_001288122.1;Note=formate hydrogenlyase subunit 5%3B HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide;gbkey=CDS;gene=hycE;product=formate hydrogenlyase subunit 5;protein_id=WP_001288122.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3583570 3584493 . - . ID=gene3540;Name=hycD;gbkey=Gene;gene=hycD;gene_biotype=protein_coding;locus_tag=SH03_RS17750;old_locus_tag=SH03_17760 NZ_CP010441.1 Protein Homology CDS 3583570 3584493 . - 0 ID=cds3448;Parent=gene3540;Dbxref=Genbank:WP_000115224.1;Name=WP_000115224.1;Note=formate hydrogenlyase subunit 4%3B HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide;gbkey=CDS;gene=hycD;product=formate hydrogenlyase subunit 4;protein_id=WP_000115224.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3584496 3586322 . - . ID=gene3541;Name=SH03_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17755;old_locus_tag=SH03_17765 NZ_CP010441.1 Protein Homology CDS 3584496 3586322 . - 0 ID=cds3449;Parent=gene3541;Dbxref=Genbank:WP_001274396.1;Name=WP_001274396.1;Note=catalyzes the oxidation of formate to carbon dioxide and molecular hydrogen%3B formate hydrogenlyase comprises of a formate dehydrogenase%2C unidentified electron carriers and a hydrogenase (subunit 3);gbkey=CDS;product=formate hydrogenlyase subunit 3;protein_id=WP_001274396.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3586319 3586930 . - . ID=gene3542;Name=SH03_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17760;old_locus_tag=SH03_17770 NZ_CP010441.1 Protein Homology CDS 3586319 3586930 . - 0 ID=cds3450;Parent=gene3542;Dbxref=Genbank:WP_001079186.1;Name=WP_001079186.1;gbkey=CDS;product=formate hydrogenlyase subunit 2;protein_id=WP_001079186.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3586831 3587139 . + . ID=gene3543;Name=SH03_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17765;old_locus_tag=SH03_17775 NZ_CP010441.1 Protein Homology CDS 3586831 3587139 . + 0 ID=cds3451;Parent=gene3543;Dbxref=Genbank:WP_001443036.1;Name=WP_001443036.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001443036.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3587055 3587516 . - . ID=gene3544;Name=SH03_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17770;old_locus_tag=SH03_17780 NZ_CP010441.1 Protein Homology CDS 3587055 3587516 . - 0 ID=cds3452;Parent=gene3544;Dbxref=Genbank:WP_000158056.1;Name=WP_000158056.1;Note=regulates several genes involved in the formate hydrogenlyase system%3B seems to prevent binding of FhlA transcriptional activator to the activator sequence of hyc operon;gbkey=CDS;product=formate hydrogenlyase regulatory protein HycA;protein_id=WP_000158056.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3587728 3588078 . + . ID=gene3545;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=SH03_RS17775;old_locus_tag=SH03_17785 NZ_CP010441.1 Protein Homology CDS 3587728 3588078 . + 0 ID=cds3453;Parent=gene3545;Dbxref=Genbank:WP_001299100.1;Name=WP_001299100.1;Note=plays a role in hydrogenase nickel cofactor insertion;gbkey=CDS;gene=hypA;product=protein HypA;protein_id=WP_001299100.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3588082 3588954 . + . ID=gene3546;Name=SH03_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17780;old_locus_tag=SH03_17790 NZ_CP010441.1 Protein Homology CDS 3588082 3588954 . + 0 ID=cds3454;Parent=gene3546;Dbxref=Genbank:WP_000337665.1;Name=WP_000337665.1;Note=GTP hydrolase involved in nickel liganding into hydrogenases;gbkey=CDS;product=hydrogenase isoenzymes nickel incorporation protein HypB;protein_id=WP_000337665.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3588945 3589217 . + . ID=gene3547;Name=SH03_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17785;old_locus_tag=SH03_17795 NZ_CP010441.1 Protein Homology CDS 3588945 3589217 . + 0 ID=cds3455;Parent=gene3547;Dbxref=Genbank:WP_000334881.1;Name=WP_000334881.1;Note=HypC%3B accessory protein necessary for maturation of the hydrogenase isoforms 1%2C 2 and 3%3B forms a complex with HypD%2C HypE%2C and HypF proteins%2C which is the site of ligand biosynthesis and attachment to the iron atom of the NiFe site in the hydrogenase;gbkey=CDS;product=hydrogenase assembly protein HypC;protein_id=WP_000334881.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3589217 3590338 . + . ID=gene3548;Name=SH03_RS17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17790;old_locus_tag=SH03_17800 NZ_CP010441.1 Protein Homology CDS 3589217 3590338 . + 0 ID=cds3456;Parent=gene3548;Dbxref=Genbank:WP_001212985.1;Name=WP_001212985.1;Note=necessary for the synthesis of all three hydrogenase isoenzymes;gbkey=CDS;product=hydrogenase isoenzymes formation protein HypD;protein_id=WP_001212985.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3590335 3591345 . + . ID=gene3549;Name=SH03_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17795;old_locus_tag=SH03_17805 NZ_CP010441.1 Protein Homology CDS 3590335 3591345 . + 0 ID=cds3457;Parent=gene3549;Dbxref=Genbank:WP_001059922.1;Name=WP_001059922.1;Note=hydrogenase isoenzymes formation protein%3B involved in the formation of the cyanate group of the large subunit of the hydrogenase%3B catalyzes the formation of thiocyanate from thiocarbamate;gbkey=CDS;product=hydrogenase isoenzymes formation protein HypE;protein_id=WP_001059922.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3591419 3593497 . + . ID=gene3550;Name=SH03_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17800;old_locus_tag=SH03_17810 NZ_CP010441.1 Protein Homology CDS 3591419 3593497 . + 0 ID=cds3458;Parent=gene3550;Dbxref=Genbank:WP_001301332.1;Name=WP_001301332.1;Note=regulates the expression of formate dehydrogenase H and hydrogenase-3 structural genes;gbkey=CDS;product=formate hydrogenlyase transcriptional activator;protein_id=WP_001301332.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3593534 3593887 . - . ID=gene3551;Name=SH03_RS17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17805;old_locus_tag=SH03_17815 NZ_CP010441.1 Protein Homology CDS 3593534 3593887 . - 0 ID=cds3459;Parent=gene3551;Dbxref=Genbank:WP_000015497.1;Name=WP_000015497.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000015497.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3594174 3596735 . + . ID=gene3552;Name=SH03_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17810;old_locus_tag=SH03_17820 NZ_CP010441.1 Protein Homology CDS 3594174 3596735 . + 0 ID=cds3460;Parent=gene3552;Dbxref=Genbank:WP_001272928.1;Name=WP_001272928.1;Note=This protein performs the mismatch recognition step during the DNA repair process;gbkey=CDS;product=DNA mismatch repair protein MutS;protein_id=WP_001272928.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3596841 3597497 . + . ID=gene3553;Name=SH03_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17815;old_locus_tag=SH03_17825 NZ_CP010441.1 Protein Homology CDS 3596841 3597497 . + 0 ID=cds3461;Parent=gene3553;Dbxref=Genbank:WP_001141337.1;Name=WP_001141337.1;gbkey=CDS;product=Serine/threonine-protein phosphatase 2;protein_id=WP_001141337.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3597548 3598315 . - . ID=gene3554;Name=SH03_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17820;old_locus_tag=SH03_17830 NZ_CP010441.1 Protein Homology CDS 3597548 3598315 . - 0 ID=cds3462;Parent=gene3554;Dbxref=Genbank:WP_001300386.1;Name=WP_001300386.1;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_001300386.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3598511 3599419 . + . ID=gene3555;Name=SH03_RS17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17825;old_locus_tag=SH03_17835 NZ_CP010441.1 Protein Homology CDS 3598511 3599419 . + 0 ID=cds3463;Parent=gene3555;Dbxref=Genbank:WP_000848004.1;Name=WP_000848004.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_000848004.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3599416 3600582 . + . ID=gene3556;Name=SH03_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17830;old_locus_tag=SH03_17840 NZ_CP010441.1 Protein Homology CDS 3599416 3600582 . + 0 ID=cds3464;Parent=gene3556;Dbxref=Genbank:WP_001393459.1;Name=WP_001393459.1;gbkey=CDS;product=DUF1537 domain-containing protein;protein_id=WP_001393459.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3600674 3601312 . + . ID=gene3557;Name=SH03_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17835;old_locus_tag=SH03_17845 NZ_CP010441.1 Protein Homology CDS 3600674 3601312 . + 0 ID=cds3465;Parent=gene3557;Dbxref=Genbank:WP_001278991.1;Name=WP_001278991.1;gbkey=CDS;product=aldolase;protein_id=WP_001278991.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3601317 3602093 . + . ID=gene3558;Name=SH03_RS17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17840;old_locus_tag=SH03_17850 NZ_CP010441.1 Protein Homology CDS 3601317 3602093 . + 0 ID=cds3466;Parent=gene3558;Dbxref=Genbank:WP_001136934.1;Name=WP_001136934.1;gbkey=CDS;product=hydroxypyruvate isomerase;protein_id=WP_001136934.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3602182 3603546 . + . ID=gene3559;Name=SH03_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17845;old_locus_tag=SH03_17855 NZ_CP010441.1 Protein Homology CDS 3602182 3603546 . + 0 ID=cds3467;Parent=gene3559;Dbxref=Genbank:WP_000104441.1;Name=WP_000104441.1;Note=member of the Gnt family of gluconate transporters%3B not involved in gluconate transport%3B unknown function;gbkey=CDS;product=permease;protein_id=WP_000104441.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3603640 3604632 . - . ID=gene3560;Name=SH03_RS17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17850;old_locus_tag=SH03_17860 NZ_CP010441.1 Protein Homology CDS 3603640 3604632 . - 0 ID=cds3468;Parent=gene3560;Dbxref=Genbank:WP_000081588.1;Name=WP_000081588.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor controls a regulon of genes required for protection against external stresses;gbkey=CDS;product=RNA polymerase sigma factor RpoS;protein_id=WP_000081588.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3604695 3605834 . - . ID=gene3561;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=SH03_RS17855;old_locus_tag=SH03_17865 NZ_CP010441.1 Protein Homology CDS 3604695 3605834 . - 0 ID=cds3469;Parent=gene3561;Dbxref=Genbank:WP_001272592.1;Name=WP_001272592.1;Note=outer membrane lipoprotein involved in stationary-phase cell survival%3B similar to LppB virulence determinant from Haemophilus somnus;gbkey=CDS;gene=nlpD;product=murein hydrolase activator NlpD;protein_id=WP_001272592.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3605974 3606600 . - . ID=gene3562;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=SH03_RS17860;old_locus_tag=SH03_17870 NZ_CP010441.1 Protein Homology CDS 3605974 3606600 . - 0 ID=cds3470;Parent=gene3562;Dbxref=Genbank:WP_000254708.1;Name=WP_000254708.1;Note=catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins;gbkey=CDS;gene=pcm;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_000254708.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3606594 3607355 . - . ID=gene3563;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=SH03_RS17865;old_locus_tag=SH03_17875 NZ_CP010441.1 Protein Homology CDS 3606594 3607355 . - 0 ID=cds3471;Parent=gene3563;Dbxref=Genbank:WP_001295182.1;Name=WP_001295182.1;Note=broad specificity 5'(3')-nucleotidase and polyphosphatase;gbkey=CDS;gene=surE;product=5'/3'-nucleotidase SurE;protein_id=WP_001295182.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3607336 3608385 . - . ID=gene3564;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;gene_synonym=ygbO;locus_tag=SH03_RS17870;old_locus_tag=SH03_17880 NZ_CP010441.1 Protein Homology CDS 3607336 3608385 . - 0 ID=cds3472;Parent=gene3564;Dbxref=Genbank:WP_000568943.1;Name=WP_000568943.1;Note=catalyzes the modification of U13 in tRNA(Glu);gbkey=CDS;gene=truD;product=tRNA pseudouridine synthase D;protein_id=WP_000568943.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3608382 3608861 . - . ID=gene3565;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=SH03_RS17875;old_locus_tag=SH03_17885 NZ_CP010441.1 Protein Homology CDS 3608382 3608861 . - 0 ID=cds3473;Parent=gene3565;Dbxref=Genbank:WP_001219242.1;Name=WP_001219242.1;Note=catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate;gbkey=CDS;gene=ispF;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219242.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3608861 3609571 . - . ID=gene3566;Name=SH03_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17880;old_locus_tag=SH03_17890 NZ_CP010441.1 Protein Homology CDS 3608861 3609571 . - 0 ID=cds3474;Parent=gene3566;Dbxref=Genbank:WP_000246138.1;Name=WP_000246138.1;gbkey=CDS;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_000246138.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3609590 3609901 . - . ID=gene3567;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=SH03_RS17885;old_locus_tag=SH03_17895 NZ_CP010441.1 Protein Homology CDS 3609590 3609901 . - 0 ID=cds3475;Parent=gene3567;Dbxref=Genbank:WP_000517476.1;Name=WP_000517476.1;Note=forms a complex with FtsL and FtsQ%3B colocalizes to the septal region of the dividing cell%3B membrane protein;gbkey=CDS;gene=ftsB;product=cell division protein FtsB;protein_id=WP_000517476.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3610095 3610418 . - . ID=gene3568;Name=SH03_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17890;old_locus_tag=SH03_17900 NZ_CP010441.1 Protein Homology CDS 3610095 3610418 . - 0 ID=cds3476;Parent=gene3568;Dbxref=Genbank:WP_001246104.1;Name=WP_001246104.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001246104.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3610468 3611073 . - . ID=gene3569;Name=SH03_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17895;old_locus_tag=SH03_17905 NZ_CP010441.1 Protein Homology CDS 3610468 3611073 . - 0 ID=cds3477;Parent=gene3569;Dbxref=Genbank:WP_001173673.1;Name=WP_001173673.1;Note=converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis;gbkey=CDS;product=adenylyl-sulfate kinase;protein_id=WP_001173673.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3611073 3612500 . - . ID=gene3570;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=SH03_RS17900;old_locus_tag=SH03_17910 NZ_CP010441.1 Protein Homology CDS 3611073 3612500 . - 0 ID=cds3478;Parent=gene3570;Dbxref=Genbank:WP_001090361.1;Name=WP_001090361.1;Note=may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step%3B forms a heterodimer with CysD%3B part of the GTP-binding elongation factor family CysN/NodQ;gbkey=CDS;gene=cysN;product=sulfate adenylyltransferase subunit 1;protein_id=WP_001090361.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3612502 3613410 . - . ID=gene3571;Name=SH03_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17905;old_locus_tag=SH03_17915 NZ_CP010441.1 Protein Homology CDS 3612502 3613410 . - 0 ID=cds3479;Parent=gene3571;Dbxref=Genbank:WP_000372108.1;Name=WP_000372108.1;Note=with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP;gbkey=CDS;product=sulfate adenylyltransferase subunit 2;protein_id=WP_000372108.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3613662 3614699 . + . ID=gene3572;Name=SH03_RS17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17910;old_locus_tag=SH03_17920 NZ_CP010441.1 Protein Homology CDS 3613662 3614699 . + 0 ID=cds3480;Parent=gene3572;Dbxref=Genbank:WP_000490428.1;Name=WP_000490428.1;Note=catalyzes the sequential removal of 2 amino-terminal arginines from alkaline phosphatase isozyme 1 to form isozymes 2 and 3;gbkey=CDS;product=alkaline phosphatase isozyme conversion protein;protein_id=WP_000490428.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 3614782 3615544 . + . ID=id194;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 3615650 3615934 . - . ID=gene3573;Name=SH03_RS17915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17915;old_locus_tag=SH03_17925 NZ_CP010441.1 Protein Homology CDS 3615650 3615934 . - 0 ID=cds3481;Parent=gene3573;Dbxref=Genbank:WP_001381369.1;Name=WP_001381369.1;gbkey=CDS;product=CRISPR-associated endonuclease Cas2;protein_id=WP_001381369.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3615936 3616853 . - . ID=gene3574;Name=SH03_RS17920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17920;old_locus_tag=SH03_17930 NZ_CP010441.1 Protein Homology CDS 3615936 3616853 . - 0 ID=cds3482;Parent=gene3574;Dbxref=Genbank:WP_000220066.1;Name=WP_000220066.1;gbkey=CDS;product=subtype I-E CRISPR-associated endonuclease Cas1;protein_id=WP_000220066.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3616869 3617468 . - . ID=gene3575;Name=SH03_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17925;old_locus_tag=SH03_17935 NZ_CP010441.1 Protein Homology CDS 3616869 3617468 . - 0 ID=cds3483;Parent=gene3575;Dbxref=Genbank:WP_000281400.1;Name=WP_000281400.1;gbkey=CDS;product=CRISPR system Cascade subunit CasE;protein_id=WP_000281400.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3617455 3618129 . - . ID=gene3576;Name=SH03_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17930;old_locus_tag=SH03_17940 NZ_CP010441.1 Protein Homology CDS 3617455 3618129 . - 0 ID=cds3484;Parent=gene3576;Dbxref=Genbank:WP_001334996.1;Name=WP_001334996.1;gbkey=CDS;product=CRISPR system Cascade subunit CasD;protein_id=WP_001334996.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3618132 3619223 . - . ID=gene3577;Name=SH03_RS17935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17935;old_locus_tag=SH03_17945 NZ_CP010441.1 Protein Homology CDS 3618132 3619223 . - 0 ID=cds3485;Parent=gene3577;Dbxref=Genbank:WP_000064450.1;Name=WP_000064450.1;gbkey=CDS;product=CRISPR system Cascade subunit CasC;protein_id=WP_000064450.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3619236 3619718 . - . ID=gene3578;Name=SH03_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17940;old_locus_tag=SH03_17950 NZ_CP010441.1 Protein Homology CDS 3619236 3619718 . - 0 ID=cds3486;Parent=gene3578;Dbxref=Genbank:WP_000752800.1;Name=WP_000752800.1;gbkey=CDS;product=CRISPR system Cascade subunit CasB;protein_id=WP_000752800.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3619711 3621219 . - . ID=gene3579;Name=SH03_RS17945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17945;old_locus_tag=SH03_17955 NZ_CP010441.1 Protein Homology CDS 3619711 3621219 . - 0 ID=cds3487;Parent=gene3579;Dbxref=Genbank:WP_001050401.1;Name=WP_001050401.1;Note=CRISP RNA (crRNA) containing protein;gbkey=CDS;product=CRISPR system Cascade subunit CasA;protein_id=WP_001050401.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3621634 3624300 . - . ID=gene3580;Name=SH03_RS17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17950;old_locus_tag=SH03_17960 NZ_CP010441.1 Protein Homology CDS 3621634 3624300 . - 0 ID=cds3488;Parent=gene3580;Dbxref=Genbank:WP_000433152.1;Name=WP_000433152.1;Note=required for the activity of the Cascade antiviral complex;gbkey=CDS;product=CRISPR-associated endonuclease/helicase Cas3;protein_id=WP_000433152.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3624659 3625393 . - . ID=gene3581;Name=SH03_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17955;old_locus_tag=SH03_17965 NZ_CP010441.1 Protein Homology CDS 3624659 3625393 . - 0 ID=cds3489;Parent=gene3581;Dbxref=Genbank:WP_000039850.1;Name=WP_000039850.1;Note=catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite;gbkey=CDS;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000039850.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3625468 3627180 . - . ID=gene3582;Name=SH03_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17960;old_locus_tag=SH03_17970 NZ_CP010441.1 Protein Homology CDS 3625468 3627180 . - 0 ID=cds3490;Parent=gene3582;Dbxref=Genbank:WP_001290679.1;Name=WP_001290679.1;Note=hemoprotein%3B NADPH dependent%3B with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide;gbkey=CDS;product=sulfite reductase subunit beta;protein_id=WP_001290679.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3627180 3628979 . - . ID=gene3583;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=SH03_RS17965;old_locus_tag=SH03_17975 NZ_CP010441.1 Protein Homology CDS 3627180 3628979 . - 0 ID=cds3491;Parent=gene3583;Dbxref=Genbank:WP_000211913.1;Name=WP_000211913.1;Note=catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity;gbkey=CDS;gene=cysJ;product=sulfite reductase subunit alpha;protein_id=WP_000211913.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3629298 3629660 . + . ID=gene3584;Name=SH03_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17970;old_locus_tag=SH03_17980 NZ_CP010441.1 Protein Homology CDS 3629298 3629660 . + 0 ID=cds3492;Parent=gene3584;Dbxref=Genbank:WP_000108294.1;Name=WP_000108294.1;gbkey=CDS;product=6-carboxy-5%2C6%2C7%2C8-tetrahydropterin synthase;protein_id=WP_000108294.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3629738 3631009 . + . ID=gene3585;Name=SH03_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17975;old_locus_tag=SH03_17985 NZ_CP010441.1 Protein Homology CDS 3629738 3631009 . + 0 ID=cds3493;Parent=gene3585;Dbxref=Genbank:WP_001301334.1;Name=WP_001301334.1;gbkey=CDS;product=electron transfer flavoprotein-quinone oxidoreductase;protein_id=WP_001301334.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3631000 3631260 . + . ID=gene3586;Name=SH03_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17980;old_locus_tag=SH03_17990 NZ_CP010441.1 Protein Homology CDS 3631000 3631260 . + 0 ID=cds3494;Parent=gene3586;Dbxref=Genbank:WP_000109529.1;Name=WP_000109529.1;gbkey=CDS;product=ferredoxin-like protein YgcO;protein_id=WP_000109529.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3631277 3631852 . + . ID=gene3587;Name=SH03_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17985;old_locus_tag=SH03_17995 NZ_CP010441.1 Protein Homology CDS 3631277 3631852 . + 0 ID=cds3495;Parent=gene3587;Dbxref=Genbank:WP_001130266.1;Name=WP_001130266.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001130266.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3632000 3632860 . - . ID=gene3588;Name=SH03_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17990;old_locus_tag=SH03_18000 NZ_CP010441.1 Protein Homology CDS 3632000 3632860 . - 0 ID=cds3496;Parent=gene3588;Dbxref=Genbank:WP_001299097.1;Name=WP_001299097.1;gbkey=CDS;product=flavoprotein;protein_id=WP_001299097.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3632857 3633636 . - . ID=gene3589;Name=SH03_RS17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS17995;old_locus_tag=SH03_18005 NZ_CP010441.1 Protein Homology CDS 3632857 3633636 . - 0 ID=cds3497;Parent=gene3589;Dbxref=Genbank:WP_001299652.1;Name=WP_001299652.1;gbkey=CDS;product=flavoprotein;protein_id=WP_001299652.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3633614 3634951 . - . ID=gene3590;Name=SH03_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18000;old_locus_tag=SH03_18010 NZ_CP010441.1 Protein Homology CDS 3633614 3634951 . - 0 ID=cds3498;Parent=gene3590;Dbxref=Genbank:WP_001098105.1;Name=WP_001098105.1;gbkey=CDS;product=metabolite transporter;protein_id=WP_001098105.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3635045 3636499 . - . ID=gene3591;Name=SH03_RS18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18005;old_locus_tag=SH03_18015 NZ_CP010441.1 Protein Homology CDS 3635045 3636499 . - 0 ID=cds3499;Parent=gene3591;Dbxref=Genbank:WP_000059307.1;Name=WP_000059307.1;gbkey=CDS;product=FAD-linked oxidoreductase;protein_id=WP_000059307.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3636569 3637354 . - . ID=gene3592;Name=SH03_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18010;old_locus_tag=SH03_18020 NZ_CP010441.1 Protein Homology CDS 3636569 3637354 . - 0 ID=cds3500;Parent=gene3592;Dbxref=Genbank:WP_000021334.1;Name=WP_000021334.1;gbkey=CDS;product=SDR family oxidoreductase;protein_id=WP_000021334.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3637673 3638950 . + . ID=gene3593;Name=SH03_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18015;old_locus_tag=SH03_18025 NZ_CP010441.1 Protein Homology CDS 3637673 3638950 . + 0 ID=cds3501;Parent=gene3593;Dbxref=Genbank:WP_001164544.1;Name=WP_001164544.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001164544.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3638977 3640455 . + . ID=gene3594;Name=SH03_RS18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18020;old_locus_tag=SH03_18030 NZ_CP010441.1 Protein Homology CDS 3638977 3640455 . + 0 ID=cds3502;Parent=gene3594;Dbxref=Genbank:WP_000039688.1;Name=WP_000039688.1;gbkey=CDS;product=kinase;protein_id=WP_000039688.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 3641095 3641488 . + . ID=id195;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 3641828 3642499 . - . ID=gene3595;Name=SH03_RS18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18025;old_locus_tag=SH03_18035 NZ_CP010441.1 Protein Homology CDS 3641828 3642499 . - 0 ID=cds3503;Parent=gene3595;Dbxref=Genbank:WP_001199973.1;Name=WP_001199973.1;gbkey=CDS;product=7-carboxy-7-deazaguanine synthase;protein_id=WP_001199973.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3642638 3642778 . + . ID=gene3596;Name=SH03_RS18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18030;old_locus_tag=SH03_18040 NZ_CP010441.1 Protein Homology CDS 3642638 3642778 . + 0 ID=cds3504;Parent=gene3596;Dbxref=Genbank:WP_001288228.1;Name=WP_001288228.1;gbkey=CDS;product=membrane stress resistance protein;protein_id=WP_001288228.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3642792 3643664 . + . ID=gene3597;Name=SH03_RS18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18035;old_locus_tag=SH03_18045 NZ_CP010441.1 Protein Homology CDS 3642792 3643664 . + 0 ID=cds3505;Parent=gene3597;Dbxref=Genbank:WP_001268460.1;Name=WP_001268460.1;gbkey=CDS;product=TPM domain protein phosphatase;protein_id=WP_001268460.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3643724 3645022 . - . ID=gene3598;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=SH03_RS18040;old_locus_tag=SH03_18050 NZ_CP010441.1 Protein Homology CDS 3643724 3645022 . - 0 ID=cds3506;Parent=gene3598;Dbxref=Genbank:WP_000036723.1;Name=WP_000036723.1;Note=catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;gbkey=CDS;gene=eno;product=enolase;protein_id=WP_000036723.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3645110 3646747 . - . ID=gene3599;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=SH03_RS18045;old_locus_tag=SH03_18055 NZ_CP010441.1 Protein Homology CDS 3645110 3646747 . - 0 ID=cds3507;Parent=gene3599;Dbxref=Genbank:WP_000210878.1;Name=WP_000210878.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;product=CTP synthase;protein_id=WP_000210878.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3646975 3647766 . - . ID=gene3600;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=SH03_RS18050;old_locus_tag=SH03_18060 NZ_CP010441.1 Protein Homology CDS 3646975 3647766 . - 0 ID=cds3508;Parent=gene3600;Dbxref=Genbank:WP_001071648.1;Name=WP_001071648.1;Note=functions in degradation of stringent response intracellular messenger ppGpp%3B in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF%3B activity of MazG is inhibited by MazEF in vitro%3B ppGpp inhibits mazEF expression%3B MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation%3B MazG also interacts with the GTPase protein Era;gbkey=CDS;gene=mazG;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_001071648.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3647837 3648172 . - . ID=gene3601;Name=SH03_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18055;old_locus_tag=SH03_18065 NZ_CP010441.1 Protein Homology CDS 3647837 3648172 . - 0 ID=cds3509;Parent=gene3601;Dbxref=Genbank:WP_000254738.1;Name=WP_000254738.1;Note=ChpA%3B endoribonuclease%3B toxin of the MazF-MazE (ChpA-ChpR) toxin-antitoxin system;gbkey=CDS;product=mRNA interferase MazF;protein_id=WP_000254738.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3648172 3648420 . - . ID=gene3602;Name=SH03_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18060;old_locus_tag=SH03_18070 NZ_CP010441.1 Protein Homology CDS 3648172 3648420 . - 0 ID=cds3510;Parent=gene3602;Dbxref=Genbank:WP_000581937.1;Name=WP_000581937.1;Note=part of the MazF-MazE toxin-antitoxin system%3B conteracts MazF;gbkey=CDS;product=antitoxin MazE;protein_id=WP_000581937.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3648498 3650732 . - . ID=gene3603;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=SH03_RS18065;old_locus_tag=SH03_18075 NZ_CP010441.1 Protein Homology CDS 3648498 3650732 . - 0 ID=cds3511;Parent=gene3603;Dbxref=Genbank:WP_000226815.1;Name=WP_000226815.1;Note=(p)ppGpp synthetase%3B catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP;gbkey=CDS;gene=relA;product=GTP pyrophosphokinase;protein_id=WP_000226815.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3650780 3652081 . - . ID=gene3604;Name=rumA;gbkey=Gene;gene=rumA;gene_biotype=protein_coding;locus_tag=SH03_RS18070;old_locus_tag=SH03_18080 NZ_CP010441.1 Protein Homology CDS 3650780 3652081 . - 0 ID=cds3512;Parent=gene3604;Dbxref=Genbank:WP_000046812.1;Name=WP_000046812.1;Note=in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA%3B binds an iron-sulfur cluster [4Fe-4S];gbkey=CDS;gene=rumA;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_000046812.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3652138 3654894 . + . ID=gene3605;Name=SH03_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18075;old_locus_tag=SH03_18085 NZ_CP010441.1 Protein Homology CDS 3652138 3654894 . + 0 ID=cds3513;Parent=gene3605;Dbxref=Genbank:WP_000186450.1;Name=WP_000186450.1;Note=part of the two-component regulatory system with UvrY%3B involved in the regulation of carbon metabolism via the csrA/csrB regulatory system;gbkey=CDS;product=signal transduction histidine kinase;protein_id=WP_000186450.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3655126 3656466 . - . ID=gene3606;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=SH03_RS18080;old_locus_tag=SH03_18090 NZ_CP010441.1 Protein Homology CDS 3655126 3656466 . - 0 ID=cds3514;Parent=gene3606;Dbxref=Genbank:WP_000098255.1;Name=WP_000098255.1;Note=catalyzes the formation of 5-keto-4-deoxy-D-glucarate from glucarate;gbkey=CDS;gene=gudD;product=glucarate dehydratase;protein_id=WP_000098255.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3656487 3657827 . - . ID=gene3607;Name=SH03_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18085;old_locus_tag=SH03_18095 NZ_CP010441.1 Protein Homology CDS 3656487 3657827 . - 0 ID=cds3515;Parent=gene3607;Dbxref=Genbank:WP_000235391.1;Name=WP_000235391.1;gbkey=CDS;product=glucarate dehydratase-related protein;protein_id=WP_000235391.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3657829 3659181 . - . ID=gene3608;Name=SH03_RS18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18090;old_locus_tag=SH03_18100 NZ_CP010441.1 Protein Homology CDS 3657829 3659181 . - 0 ID=cds3516;Parent=gene3608;Dbxref=Genbank:WP_000097072.1;Name=WP_000097072.1;gbkey=CDS;product=glucarate transporter;protein_id=WP_000097072.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3659616 3660065 . - . ID=gene3609;Name=SH03_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18095;old_locus_tag=SH03_18105 NZ_CP010441.1 Protein Homology CDS 3659616 3660065 . - 0 ID=cds3517;Parent=gene3609;Dbxref=Genbank:WP_000807753.1;Name=WP_000807753.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin;protein_id=WP_000807753.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3660083 3660865 . - . ID=gene3610;Name=SH03_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18100;old_locus_tag=SH03_18110 NZ_CP010441.1 Protein Homology CDS 3660083 3660865 . - 0 ID=cds3518;Parent=gene3610;Dbxref=Genbank:WP_000890001.1;Name=WP_000890001.1;Note=catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp;gbkey=CDS;product=tRNA pseudouridine synthase C;protein_id=WP_000890001.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3660865 3661194 . - . ID=gene3611;Name=SH03_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18105;old_locus_tag=SH03_18115 NZ_CP010441.1 Protein Homology CDS 3660865 3661194 . - 0 ID=cds3519;Parent=gene3611;Dbxref=Genbank:WP_000206990.1;Name=WP_000206990.1;gbkey=CDS;product=DUF446 domain-containing protein;protein_id=WP_000206990.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3661441 3661566 . - . ID=gene3612;Name=SH03_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18110 NZ_CP010441.1 Protein Homology CDS 3661441 3661566 . - 0 ID=cds3520;Parent=gene3612;Dbxref=Genbank:WP_001393510.1;Name=WP_001393510.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001393510.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3661816 3662361 . - . ID=gene3613;Name=SH03_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18115;old_locus_tag=SH03_18125 NZ_CP010441.1 Protein Homology CDS 3661816 3662361 . - 0 ID=cds3521;Parent=gene3613;Dbxref=Genbank:WP_000342431.1;Name=WP_000342431.1;Note=SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function;gbkey=CDS;product=protein Syd;protein_id=WP_000342431.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3662429 3663277 . + . ID=gene3614;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=SH03_RS18120;old_locus_tag=SH03_18130 NZ_CP010441.1 Protein Homology CDS 3662429 3663277 . + 0 ID=cds3522;Parent=gene3614;Dbxref=Genbank:WP_000100421.1;Name=WP_000100421.1;Note=catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;gbkey=CDS;gene=queF;product=NADPH-dependent 7-cyano-7-deazaguanine reductase;protein_id=WP_000100421.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3663389 3664753 . + . ID=gene3615;Name=SH03_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18125;old_locus_tag=SH03_18135 NZ_CP010441.1 Protein Homology CDS 3663389 3664753 . + 0 ID=cds3523;Parent=gene3615;Dbxref=Genbank:WP_000627968.1;Name=WP_000627968.1;gbkey=CDS;product=LOG family protein;protein_id=WP_000627968.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3665310 3666599 . + . ID=gene3616;Name=SH03_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18130;old_locus_tag=SH03_18140 NZ_CP010441.1 Protein Homology CDS 3665310 3666599 . + 0 ID=cds3524;Parent=gene3616;Dbxref=Genbank:WP_000450476.1;Name=WP_000450476.1;gbkey=CDS;product=serine transporter;protein_id=WP_000450476.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3666657 3668024 . + . ID=gene3617;Name=SH03_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18135;old_locus_tag=SH03_18145 NZ_CP010441.1 Protein Homology CDS 3666657 3668024 . + 0 ID=cds3525;Parent=gene3617;Dbxref=Genbank:WP_000626422.1;Name=WP_000626422.1;Note=catalyzes the formation of pyruvate from serine;gbkey=CDS;product=L-serine dehydratase 2;protein_id=WP_000626422.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3668136 3668891 . + . ID=gene3618;Name=SH03_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18140;old_locus_tag=SH03_18150 NZ_CP010441.1 Protein Homology CDS 3668136 3668891 . + 0 ID=cds3526;Parent=gene3618;Dbxref=Genbank:WP_000268232.1;Name=WP_000268232.1;Note=similar to flap endonuclease%3B FEN family%3B protein from E. coli does not have exonuclease activity;gbkey=CDS;product=flap endonuclease Xni;protein_id=WP_000268232.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3668946 3670094 . - . ID=gene3619;Name=SH03_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18145;old_locus_tag=SH03_18155 NZ_CP010441.1 Protein Homology CDS 3668946 3670094 . - 0 ID=cds3527;Parent=gene3619;Dbxref=Genbank:WP_000013588.1;Name=WP_000013588.1;gbkey=CDS;product=lactaldehyde reductase;protein_id=WP_000013588.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3670122 3670769 . - . ID=gene3620;Name=SH03_RS18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18150;old_locus_tag=SH03_18160 NZ_CP010441.1 Protein Homology CDS 3670122 3670769 . - 0 ID=cds3528;Parent=gene3620;Dbxref=Genbank:WP_000440781.1;Name=WP_000440781.1;Note=catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate;gbkey=CDS;product=L-fuculose phosphate aldolase;protein_id=WP_000440781.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3671316 3672632 . + . ID=gene3621;Name=SH03_RS18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18155;old_locus_tag=SH03_18165 NZ_CP010441.1 Protein Homology CDS 3671316 3672632 . + 0 ID=cds3529;Parent=gene3621;Dbxref=Genbank:WP_000528603.1;Name=WP_000528603.1;gbkey=CDS;product=L-fucose-proton symporter;protein_id=WP_000528603.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3672665 3674440 . + . ID=gene3622;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=SH03_RS18160;old_locus_tag=SH03_18170 NZ_CP010441.1 Protein Homology CDS 3672665 3674440 . + 0 ID=cds3530;Parent=gene3622;Dbxref=Genbank:WP_000724153.1;Name=WP_000724153.1;Note=catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose;gbkey=CDS;gene=fucI;product=L-fucose isomerase;protein_id=WP_000724153.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3674549 3675967 . + . ID=gene3623;Name=SH03_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18165;old_locus_tag=SH03_18175 NZ_CP010441.1 Protein Homology CDS 3674549 3675967 . + 0 ID=cds3531;Parent=gene3623;Dbxref=Genbank:WP_000808392.1;Name=WP_000808392.1;gbkey=CDS;product=L-fuculokinase;protein_id=WP_000808392.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3675969 3676391 . + . ID=gene3624;Name=SH03_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18170;old_locus_tag=SH03_18180 NZ_CP010441.1 Protein Homology CDS 3675969 3676391 . + 0 ID=cds3532;Parent=gene3624;Dbxref=Genbank:WP_000920840.1;Name=WP_000920840.1;gbkey=CDS;product=L-fucose mutarotase;protein_id=WP_000920840.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3676449 3677180 . + . ID=gene3625;Name=SH03_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18175;old_locus_tag=SH03_18185 NZ_CP010441.1 Protein Homology CDS 3676449 3677180 . + 0 ID=cds3533;Parent=gene3625;Dbxref=Genbank:WP_000642344.1;Name=WP_000642344.1;Note=regulates expression of genes involved in L-fucose utilization;gbkey=CDS;product=l-fucose operon activator;protein_id=WP_000642344.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3677224 3678324 . - . ID=gene3626;Name=SH03_RS18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18180;old_locus_tag=SH03_18190 NZ_CP010441.1 Protein Homology CDS 3677224 3678324 . - 0 ID=cds3534;Parent=gene3626;Dbxref=Genbank:WP_001045520.1;Name=WP_001045520.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase M;protein_id=WP_001045520.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3678317 3678712 . - . ID=gene3627;Name=SH03_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18185;old_locus_tag=SH03_18195 NZ_CP010441.1 Protein Homology CDS 3678317 3678712 . - 0 ID=cds3535;Parent=gene3627;Dbxref=Genbank:WP_000203905.1;Name=WP_000203905.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000203905.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3678731 3679648 . - . ID=gene3628;Name=SH03_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18190;old_locus_tag=SH03_18200 NZ_CP010441.1 Protein Homology CDS 3678731 3679648 . - 0 ID=cds3536;Parent=gene3628;Dbxref=Genbank:WP_000044401.1;Name=WP_000044401.1;Note=Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence;gbkey=CDS;product=glycine cleavage system transcriptional activator;protein_id=WP_000044401.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3679999 3680226 . - . ID=gene3629;Name=SH03_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18195;old_locus_tag=SH03_18205 NZ_CP010441.1 Protein Homology CDS 3679999 3680226 . - 0 ID=cds3537;Parent=gene3629;Dbxref=Genbank:WP_000750398.1;Name=WP_000750398.1;gbkey=CDS;product=DUF903 domain-containing protein;protein_id=WP_000750398.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3680418 3681623 . + . ID=gene3630;Name=SH03_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18200;old_locus_tag=SH03_18210 NZ_CP010441.1 Protein Homology CDS 3680418 3681623 . + 0 ID=cds3538;Parent=gene3630;Dbxref=Genbank:WP_001300698.1;Name=WP_001300698.1;gbkey=CDS;product=cysteine desulfurase CsdA;protein_id=WP_001300698.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3681623 3682066 . + . ID=gene3631;Name=SH03_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18205;old_locus_tag=SH03_18215 NZ_CP010441.1 Protein Homology CDS 3681623 3682066 . + 0 ID=cds3539;Parent=gene3631;Dbxref=Genbank:WP_000184261.1;Name=WP_000184261.1;Note=binds and activates CsdA%3B Fe-S protein;gbkey=CDS;product=sulfur acceptor protein CsdE;protein_id=WP_000184261.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3682117 3682923 . - . ID=gene3632;Name=SH03_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18210;old_locus_tag=SH03_18220 NZ_CP010441.1 Protein Homology CDS 3682117 3682923 . - 0 ID=cds3540;Parent=gene3632;Dbxref=Genbank:WP_000117728.1;Name=WP_000117728.1;Note=accepts sulfur from CsdA;gbkey=CDS;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=WP_000117728.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3683162 3684259 . - . ID=gene3633;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=SH03_RS18215;old_locus_tag=SH03_18225 NZ_CP010441.1 Protein Homology CDS 3683162 3684259 . - 0 ID=cds3541;Parent=gene3633;Dbxref=Genbank:WP_000678646.1;Name=WP_000678646.1;Note=membrane-bound%2C lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltA;product=murein transglycosylase;protein_id=WP_000678646.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 3684466 3684766 . + . ID=id196;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 3684468 3684544 . + . ID=gene3634;Name=SH03_RS18220;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS18220;old_locus_tag=SH03_18230 NZ_CP010441.1 tRNAscan-SE tRNA 3684468 3684544 . + . ID=rna92;Parent=gene3634;anticodon=(pos:3684502..3684504);gbkey=tRNA;product=tRNA-Met NZ_CP010441.1 tRNAscan-SE exon 3684468 3684544 . + . ID=id197;Parent=rna92;anticodon=(pos:3684502..3684504);gbkey=tRNA;product=tRNA-Met NZ_CP010441.1 RefSeq gene 3684578 3684654 . + . ID=gene3635;Name=SH03_RS18225;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS18225;old_locus_tag=SH03_18235 NZ_CP010441.1 tRNAscan-SE tRNA 3684578 3684654 . + . ID=rna93;Parent=gene3635;anticodon=(pos:3684612..3684614);gbkey=tRNA;product=tRNA-Met NZ_CP010441.1 tRNAscan-SE exon 3684578 3684654 . + . ID=id198;Parent=rna93;anticodon=(pos:3684612..3684614);gbkey=tRNA;product=tRNA-Met NZ_CP010441.1 RefSeq gene 3684688 3684764 . + . ID=gene3636;Name=SH03_RS18230;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS18230;old_locus_tag=SH03_18240 NZ_CP010441.1 tRNAscan-SE tRNA 3684688 3684764 . + . ID=rna94;Parent=gene3636;anticodon=(pos:3684722..3684724);gbkey=tRNA;product=tRNA-Met NZ_CP010441.1 tRNAscan-SE exon 3684688 3684764 . + . ID=id199;Parent=rna94;anticodon=(pos:3684722..3684724);gbkey=tRNA;product=tRNA-Met NZ_CP010441.1 RefSeq gene 3684838 3686091 . - . ID=gene3637;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=SH03_RS18235;old_locus_tag=SH03_18245 NZ_CP010441.1 Protein Homology CDS 3684838 3686091 . - 0 ID=cds3542;Parent=gene3637;Dbxref=Genbank:WP_000016907.1;Name=WP_000016907.1;Note=hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan;gbkey=CDS;gene=amiC;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_000016907.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3686323 3687654 . + . ID=gene3638;Name=SH03_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18240;old_locus_tag=SH03_18250 NZ_CP010441.1 Protein Homology CDS 3686323 3687654 . + 0 ID=cds3543;Parent=gene3638;Dbxref=Genbank:WP_046377552.1;Name=WP_046377552.1;Note=catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis;gbkey=CDS;product=N-acetylglutamate synthase;protein_id=WP_046377552.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3687716 3689542 . - . ID=gene3639;Name=recD;gbkey=Gene;gene=recD;gene_biotype=pseudogene;locus_tag=SH03_RS18245;pseudo=true NZ_CP010441.1 Protein Homology CDS 3687716 3689542 . - 0 ID=cds3544;Parent=gene3639;Note=helicase/nuclease%3B with RecBC catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;gbkey=CDS;gene=recD;product=exonuclease V subunit alpha;pseudo=true;transl_except=(pos:complement(3687854..3687856)%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq gene 3689542 3693084 . - . ID=gene3640;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=SH03_RS18250;old_locus_tag=SH03_18260 NZ_CP010441.1 Protein Homology CDS 3689542 3693084 . - 0 ID=cds3545;Parent=gene3640;Dbxref=Genbank:WP_001285993.1;Name=WP_001285993.1;Note=helicase/nuclease%3B with RecCD catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;gbkey=CDS;gene=recB;product=RecBCD enzyme subunit RecB;protein_id=WP_001285993.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3693077 3695965 . - . ID=gene3641;Name=SH03_RS18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18255;old_locus_tag=SH03_18265 NZ_CP010441.1 Protein Homology CDS 3693077 3695965 . - 0 ID=cds3546;Parent=gene3641;Dbxref=Genbank:WP_001138201.1;Name=WP_001138201.1;Note=degrades small peptides;gbkey=CDS;product=protease 3;protein_id=WP_001138201.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3696141 3699509 . - . ID=gene3642;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=SH03_RS18260;old_locus_tag=SH03_18270 NZ_CP010441.1 Protein Homology CDS 3696141 3699509 . - 0 ID=cds3547;Parent=gene3642;Dbxref=Genbank:WP_000946938.1;Name=WP_000946938.1;Note=catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides%3B component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination;gbkey=CDS;gene=recC;product=RecBCD enzyme subunit RecC;protein_id=WP_000946938.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3699522 3699845 . - . ID=gene3643;Name=SH03_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18265;old_locus_tag=SH03_18275 NZ_CP010441.1 Protein Homology CDS 3699522 3699845 . - 0 ID=cds3548;Parent=gene3643;Dbxref=Genbank:WP_001276460.1;Name=WP_001276460.1;gbkey=CDS;product=prepilin peptidase-dependent protein C;protein_id=WP_001276460.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3699830 3700237 . - . ID=gene3644;Name=SH03_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18270;old_locus_tag=SH03_18280 NZ_CP010441.1 Protein Homology CDS 3699830 3700237 . - 0 ID=cds3549;Parent=gene3644;Dbxref=Genbank:WP_001078376.1;Name=WP_001078376.1;gbkey=CDS;product=DUF2509 domain-containing protein;protein_id=WP_001078376.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3700234 3700797 . - . ID=gene3645;Name=SH03_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18275;old_locus_tag=SH03_18285 NZ_CP010441.1 Protein Homology CDS 3700234 3700797 . - 0 ID=cds3550;Parent=gene3645;Dbxref=Genbank:WP_001144315.1;Name=WP_001144315.1;gbkey=CDS;product=prepilin peptidase-dependent protein B;protein_id=WP_001144315.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3700788 3701258 . - . ID=gene3646;Name=SH03_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18280;old_locus_tag=SH03_18290 NZ_CP010441.1 Protein Homology CDS 3700788 3701258 . - 0 ID=cds3551;Parent=gene3646;Dbxref=Genbank:WP_000857051.1;Name=WP_000857051.1;gbkey=CDS;product=prepilin peptidase-dependent protein A;protein_id=WP_000857051.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3701442 3702236 . - . ID=gene3647;Name=SH03_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18285;old_locus_tag=SH03_18295 NZ_CP010441.1 Protein Homology CDS 3701442 3702236 . - 0 ID=cds3552;Parent=gene3647;Dbxref=Genbank:WP_000816232.1;Name=WP_000816232.1;gbkey=CDS;product=thymidylate synthase;protein_id=WP_000816232.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3702243 3703118 . - . ID=gene3648;Name=SH03_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18290;old_locus_tag=SH03_18300 NZ_CP010441.1 Protein Homology CDS 3702243 3703118 . - 0 ID=cds3553;Parent=gene3648;Dbxref=Genbank:WP_000204658.1;Name=WP_000204658.1;gbkey=CDS;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204658.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3703269 3705515 . - . ID=gene3649;Name=SH03_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18295;old_locus_tag=SH03_18305 NZ_CP010441.1 Protein Homology CDS 3703269 3705515 . - 0 ID=cds3554;Parent=gene3649;Dbxref=Genbank:WP_000957910.1;Name=WP_000957910.1;Note=member of a second PTS chain involved in nitrogen metabolism%3B PtsP phosphorylates NPr;gbkey=CDS;product=phosphoenolpyruvate-protein phosphotransferase PtsP;protein_id=WP_000957910.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3705528 3706058 . - . ID=gene3650;Name=SH03_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18300;old_locus_tag=SH03_18310 NZ_CP010441.1 Protein Homology CDS 3705528 3706058 . - 0 ID=cds3555;Parent=gene3650;Dbxref=Genbank:WP_000564489.1;Name=WP_000564489.1;Note=hydrolyzes diadenosine polyphosphate;gbkey=CDS;product=RNA pyrophosphohydrolase;protein_id=WP_000564489.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3706370 3706564 . + . ID=gene3651;Name=SH03_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18305;old_locus_tag=SH03_18315 NZ_CP010441.1 Protein Homology CDS 3706370 3706564 . + 0 ID=cds3556;Parent=gene3651;Dbxref=Genbank:WP_001453804.1;Name=WP_001453804.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001453804.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3706503 3706664 . + . ID=gene3652;Name=SH03_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18310;old_locus_tag=SH03_18320 NZ_CP010441.1 Protein Homology CDS 3706503 3706664 . + 0 ID=cds3557;Parent=gene3652;Dbxref=Genbank:WP_001300513.1;Name=WP_001300513.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001300513.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3706743 3707432 . + . ID=gene3653;Name=SH03_RS18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18315;old_locus_tag=SH03_18325 NZ_CP010441.1 Protein Homology CDS 3706743 3707432 . + 0 ID=cds3558;Parent=gene3653;Dbxref=Genbank:WP_000082201.1;Name=WP_000082201.1;Note=MutH%3B Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair;gbkey=CDS;product=DNA mismatch repair protein MutH;protein_id=WP_000082201.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3707501 3708214 . + . ID=gene3654;Name=SH03_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18320;old_locus_tag=SH03_18330 NZ_CP010441.1 Protein Homology CDS 3707501 3708214 . + 0 ID=cds3559;Parent=gene3654;Dbxref=Genbank:WP_000895624.1;Name=WP_000895624.1;gbkey=CDS;product=membrane protein;protein_id=WP_000895624.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3708352 3708570 . + . ID=gene3655;Name=SH03_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18325;old_locus_tag=SH03_18335 NZ_CP010441.1 Protein Homology CDS 3708352 3708570 . + 0 ID=cds3560;Parent=gene3655;Dbxref=Genbank:WP_000758655.1;Name=WP_000758655.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000758655.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3708678 3709718 . + . ID=gene3656;Name=tas;gbkey=Gene;gene=tas;gene_biotype=protein_coding;locus_tag=SH03_RS18330;old_locus_tag=SH03_18340 NZ_CP010441.1 Protein Homology CDS 3708678 3709718 . + 0 ID=cds3561;Parent=gene3656;Dbxref=Genbank:WP_001199295.1;Name=WP_001199295.1;Note=complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain%3B member of the aldo/keto reductase 2 family%3B crystal structure of purified Escherichia coli protein shows bound NADPH;gbkey=CDS;gene=tas;product=protein tas;protein_id=WP_001199295.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3709750 3710943 . - . ID=gene3657;Name=SH03_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18335;old_locus_tag=SH03_18345 NZ_CP010441.1 Protein Homology CDS 3709750 3710943 . - 0 ID=cds3562;Parent=gene3657;Dbxref=Genbank:WP_000004616.1;Name=WP_000004616.1;gbkey=CDS;product=lysophospholipid transporter LplT;protein_id=WP_000004616.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3710936 3713095 . - . ID=gene3658;Name=SH03_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18340;old_locus_tag=SH03_18350 NZ_CP010441.1 Protein Homology CDS 3710936 3713095 . - 0 ID=cds3563;Parent=gene3658;Dbxref=Genbank:WP_000899054.1;Name=WP_000899054.1;Note=Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1;gbkey=CDS;product=bifunctional protein Aas;protein_id=WP_000899054.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3713680 3714711 . + . ID=gene3659;Name=SH03_RS18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18345;old_locus_tag=SH03_18355 NZ_CP010441.1 Protein Homology CDS 3713680 3714711 . + 0 ID=cds3564;Parent=gene3659;Dbxref=Genbank:WP_000201063.1;Name=WP_000201063.1;Note=controls transcription of galETKM;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000201063.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3714718 3715980 . - . ID=gene3660;Name=SH03_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18350;old_locus_tag=SH03_18360 NZ_CP010441.1 Protein Homology CDS 3714718 3715980 . - 0 ID=cds3565;Parent=gene3660;Dbxref=Genbank:WP_001120711.1;Name=WP_001120711.1;Note=catalyzes the decarboxylation of diaminopimelate into lysine%3B pyridoxal phosphate(PLP)-binding;gbkey=CDS;product=diaminopimelate decarboxylase;protein_id=WP_001120711.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3716102 3717037 . + . ID=gene3661;Name=SH03_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18355;old_locus_tag=SH03_18365 NZ_CP010441.1 Protein Homology CDS 3716102 3717037 . + 0 ID=cds3566;Parent=gene3661;Dbxref=Genbank:WP_000741825.1;Name=WP_000741825.1;Note=activates the transcription of the lysA gene encoding diaminopimelate decarboxylase;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_000741825.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3717024 3717716 . - . ID=gene3662;Name=SH03_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18360;old_locus_tag=SH03_18370 NZ_CP010441.1 Protein Homology CDS 3717024 3717716 . - 0 ID=cds3567;Parent=gene3662;Dbxref=Genbank:WP_000848659.1;Name=WP_000848659.1;gbkey=CDS;product=Asp/Glu_racemase;protein_id=WP_000848659.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3717845 3719263 . - . ID=gene3663;Name=SH03_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18365;old_locus_tag=SH03_18375 NZ_CP010441.1 Protein Homology CDS 3717845 3719263 . - 0 ID=cds3568;Parent=gene3663;Dbxref=Genbank:WP_001395388.1;Name=WP_001395388.1;gbkey=CDS;product=D-galactose transporter;protein_id=WP_001395388.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3719578 3720339 . - . ID=gene3664;Name=SH03_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18370;old_locus_tag=SH03_18380 NZ_CP010441.1 Protein Homology CDS 3719578 3720339 . - 0 ID=cds3569;Parent=gene3664;Dbxref=Genbank:WP_000603502.1;Name=WP_000603502.1;Note=catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate;gbkey=CDS;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase;protein_id=WP_000603502.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3720369 3721205 . - . ID=gene3665;Name=SH03_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18375;old_locus_tag=SH03_18385 NZ_CP010441.1 Protein Homology CDS 3720369 3721205 . - 0 ID=cds3570;Parent=gene3665;Dbxref=Genbank:WP_000383237.1;Name=WP_000383237.1;Note=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase%3B catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2%2C5-hexodiulosonate;gbkey=CDS;product=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase;protein_id=WP_000383237.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3721492 3722673 . - . ID=gene3666;Name=SH03_RS18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18380;old_locus_tag=SH03_18390 NZ_CP010441.1 Protein Homology CDS 3721492 3722673 . - 0 ID=cds3571;Parent=gene3666;Dbxref=Genbank:WP_038432649.1;Name=WP_038432649.1;gbkey=CDS;product=acetyl-CoA acetyltransferase;protein_id=WP_038432649.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3722928 3724157 . + . ID=gene3667;Name=SH03_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18385;old_locus_tag=SH03_18395 NZ_CP010441.1 Protein Homology CDS 3722928 3724157 . + 0 ID=cds3572;Parent=gene3667;Dbxref=Genbank:WP_000065950.1;Name=WP_000065950.1;gbkey=CDS;product=transporter;protein_id=WP_000065950.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3724731 3725249 . + . ID=gene3668;Name=SH03_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18390;old_locus_tag=SH03_18400 NZ_CP010441.1 Protein Homology CDS 3724731 3725249 . + 0 ID=cds3573;Parent=gene3668;Dbxref=Genbank:WP_000267585.1;Name=WP_000267585.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_000267585.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3725583 3726392 . + . ID=gene3669;Name=SH03_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18395;old_locus_tag=SH03_18405 NZ_CP010441.1 Protein Homology CDS 3725583 3726392 . + 0 ID=cds3574;Parent=gene3669;Dbxref=Genbank:WP_001300710.1;Name=WP_001300710.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001300710.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3726385 3726867 . + . ID=gene3670;Name=SH03_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18400;old_locus_tag=SH03_18410 NZ_CP010441.1 Protein Homology CDS 3726385 3726867 . + 0 ID=cds3575;Parent=gene3670;Dbxref=Genbank:WP_000568339.1;Name=WP_000568339.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000568339.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3727016 3727441 . - . ID=gene3671;Name=SH03_RS18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18405;old_locus_tag=SH03_18415 NZ_CP010441.1 Protein Homology CDS 3727016 3727441 . - 0 ID=cds3576;Parent=gene3671;Dbxref=Genbank:WP_000350612.1;Name=WP_000350612.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000350612.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3727635 3728124 . + . ID=gene3672;Name=SH03_RS18410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS18410;pseudo=true NZ_CP010441.1 Protein Homology CDS 3727635 3728124 . + 0 ID=cds3577;Parent=gene3672;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 3728349 3728840 . + . ID=gene3673;Name=SH03_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18415;old_locus_tag=SH03_18425 NZ_CP010441.1 Protein Homology CDS 3728349 3728840 . + 0 ID=cds3578;Parent=gene3673;Dbxref=Genbank:WP_000102780.1;Name=WP_000102780.1;gbkey=CDS;product=SycD-like chaperone family hypothetical protein;protein_id=WP_000102780.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3729175 3730551 . + . ID=gene3674;Name=SH03_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18420;old_locus_tag=SH03_18430 NZ_CP010441.1 Protein Homology CDS 3729175 3730551 . + 0 ID=cds3579;Parent=gene3674;Dbxref=Genbank:WP_038432651.1;Name=WP_038432651.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_038432651.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3730719 3730937 . + . ID=gene3675;Name=SH03_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18425;old_locus_tag=SH03_18435 NZ_CP010441.1 Protein Homology CDS 3730719 3730937 . + 0 ID=cds3580;Parent=gene3675;Dbxref=Genbank:WP_000184091.1;Name=WP_000184091.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000184091.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3731122 3731496 . + . ID=gene3676;Name=SH03_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18430;old_locus_tag=SH03_18440 NZ_CP010441.1 Protein Homology CDS 3731122 3731496 . + 0 ID=cds3581;Parent=gene3676;Dbxref=Genbank:WP_001315817.1;Name=WP_001315817.1;gbkey=CDS;product=lytic transglycosylase;protein_id=WP_001315817.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3731541 3731987 . - . ID=gene3677;Name=SH03_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18435;old_locus_tag=SH03_18445 NZ_CP010441.1 Protein Homology CDS 3731541 3731987 . - 0 ID=cds3582;Parent=gene3677;Dbxref=Genbank:WP_001310227.1;Name=WP_001310227.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_001310227.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3732018 3732173 . - . ID=gene3678;Name=SH03_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18440;old_locus_tag=SH03_18450 NZ_CP010441.1 Protein Homology CDS 3732018 3732173 . - 0 ID=cds3583;Parent=gene3678;Dbxref=Genbank:WP_000516288.1;Name=WP_000516288.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000516288.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3732395 3732826 . - . ID=gene3679;Name=SH03_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18445;old_locus_tag=SH03_18455 NZ_CP010441.1 Protein Homology CDS 3732395 3732826 . - 0 ID=cds3584;Parent=gene3679;Dbxref=Genbank:WP_000606430.1;Name=WP_000606430.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000606430.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3732829 3733101 . - . ID=gene3680;Name=SH03_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18450;old_locus_tag=SH03_18460 NZ_CP010441.1 Protein Homology CDS 3732829 3733101 . - 0 ID=cds3585;Parent=gene3680;Dbxref=Genbank:WP_001350544.1;Name=WP_001350544.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001350544.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3733043 3733198 . - . ID=gene3681;Name=SH03_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18455;old_locus_tag=SH03_18465 NZ_CP010441.1 Protein Homology CDS 3733043 3733198 . - 0 ID=cds3586;Parent=gene3681;Dbxref=Genbank:WP_001372624.1;Name=WP_001372624.1;gbkey=CDS;product=secretion protein;protein_id=WP_001372624.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 3733440 3734775 . + . ID=id200;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 3733453 3734358 . - . ID=gene3682;Name=SH03_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18460;old_locus_tag=SH03_18470 NZ_CP010441.1 Protein Homology CDS 3733453 3734358 . - 0 ID=cds3587;Parent=gene3682;Dbxref=Genbank:WP_000376502.1;Name=WP_000376502.1;gbkey=CDS;product=integrase;protein_id=WP_000376502.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3734316 3734681 . - . ID=gene3683;Name=SH03_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18465;old_locus_tag=SH03_18475 NZ_CP010441.1 Protein Homology CDS 3734316 3734681 . - 0 ID=cds3588;Parent=gene3683;Dbxref=Genbank:WP_000567766.1;Name=WP_000567766.1;Note=represses IS2 gene transcription;gbkey=CDS;product=transposase;protein_id=WP_000567766.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3734770 3735069 . - . ID=gene3684;Name=SH03_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18470;old_locus_tag=SH03_18480 NZ_CP010441.1 Protein Homology CDS 3734770 3735069 . - 0 ID=cds3589;Parent=gene3684;Dbxref=Genbank:WP_011443601.1;Name=WP_011443601.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011443601.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3735115 3735909 . - . ID=gene3685;Name=SH03_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18475;old_locus_tag=SH03_18485 NZ_CP010441.1 Protein Homology CDS 3735115 3735909 . - 0 ID=cds3590;Parent=gene3685;Dbxref=Genbank:WP_000676919.1;Name=WP_000676919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000676919.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3736065 3736138 . - . ID=gene3686;Name=SH03_RS18480;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS18480;old_locus_tag=SH03_18490 NZ_CP010441.1 tRNAscan-SE tRNA 3736065 3736138 . - . ID=rna95;Parent=gene3686;anticodon=(pos:complement(3736104..3736106));gbkey=tRNA;product=tRNA-Gly NZ_CP010441.1 tRNAscan-SE exon 3736065 3736138 . - . ID=id201;Parent=rna95;anticodon=(pos:complement(3736104..3736106));gbkey=tRNA;product=tRNA-Gly NZ_CP010441.1 RefSeq gene 3736217 3736972 . - . ID=gene3687;Name=SH03_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18485;old_locus_tag=SH03_18495 NZ_CP010441.1 Protein Homology CDS 3736217 3736972 . - 0 ID=cds3591;Parent=gene3687;Dbxref=Genbank:WP_001301085.1;Name=WP_001301085.1;gbkey=CDS;product=peptidoglycan-binding protein LysM;protein_id=WP_001301085.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3737387 3739684 . + . ID=gene3688;Name=SH03_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18490;old_locus_tag=SH03_18500 NZ_CP010441.1 Protein Homology CDS 3737387 3739684 . + 0 ID=cds3592;Parent=gene3688;Dbxref=Genbank:WP_000388150.1;Name=WP_000388150.1;Note=molybdenum cofactor-binding protein%3B participates in purine salvage;gbkey=CDS;product=xanthine dehydrogenase subunit A;protein_id=WP_000388150.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3739695 3740573 . + . ID=gene3689;Name=SH03_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18495;old_locus_tag=SH03_18505 NZ_CP010441.1 Protein Homology CDS 3739695 3740573 . + 0 ID=cds3593;Parent=gene3689;Dbxref=Genbank:WP_000459182.1;Name=WP_000459182.1;Note=FAD-binding subunit%3B with XdhA and XdhC participates in purine salvage;gbkey=CDS;product=xanthine dehydrogenase FAD-binding subunit;protein_id=WP_000459182.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3740570 3741049 . + . ID=gene3690;Name=SH03_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18500;old_locus_tag=SH03_18510 NZ_CP010441.1 Protein Homology CDS 3740570 3741049 . + 0 ID=cds3594;Parent=gene3690;Dbxref=Genbank:WP_001016605.1;Name=WP_001016605.1;Note=iron-sulfur-binding subunit%3B with XdhA and XdhB participates in purine salvage;gbkey=CDS;product=xanthine dehydrogenase iron-sulfur-binding subunit;protein_id=WP_001016605.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3741089 3742867 . - . ID=gene3691;Name=SH03_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18505;old_locus_tag=SH03_18515 NZ_CP010441.1 Protein Homology CDS 3741089 3742867 . - 0 ID=cds3595;Parent=gene3691;Dbxref=Genbank:WP_000417791.1;Name=WP_000417791.1;gbkey=CDS;product=sigma-54-interacting transcriptional activator;protein_id=WP_000417791.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3743346 3744533 . + . ID=gene3692;Name=SH03_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18510;old_locus_tag=SH03_18520 NZ_CP010441.1 Protein Homology CDS 3743346 3744533 . + 0 ID=cds3596;Parent=gene3692;Dbxref=Genbank:WP_000859787.1;Name=WP_000859787.1;gbkey=CDS;product=ornithine carbamoyltransferase;protein_id=WP_000859787.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3744591 3745787 . + . ID=gene3693;Name=SH03_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18515;old_locus_tag=SH03_18525 NZ_CP010441.1 Protein Homology CDS 3744591 3745787 . + 0 ID=cds3597;Parent=gene3693;Dbxref=Genbank:WP_000110493.1;Name=WP_000110493.1;Note=catalyzes the formation of pyruvate from 2%2C3-diaminopropionate;gbkey=CDS;product=diaminopropionate ammonia-lyase;protein_id=WP_000110493.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3745845 3747056 . + . ID=gene3694;Name=SH03_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18520;old_locus_tag=SH03_18530 NZ_CP010441.1 Protein Homology CDS 3745845 3747056 . + 0 ID=cds3598;Parent=gene3694;Dbxref=Genbank:WP_001107125.1;Name=WP_001107125.1;Note=Zn-dependent extracellular dipeptidase%3B similar to succinyl-diaminopimelate desuccinylases;gbkey=CDS;product=peptidase;protein_id=WP_001107125.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3747109 3748494 . + . ID=gene3695;Name=SH03_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18525;old_locus_tag=SH03_18535 NZ_CP010441.1 Protein Homology CDS 3747109 3748494 . + 0 ID=cds3599;Parent=gene3695;Dbxref=Genbank:WP_001264442.1;Name=WP_001264442.1;Note=catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position;gbkey=CDS;product=D-phenylhydantoinase;protein_id=WP_001264442.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3748542 3749474 . + . ID=gene3696;Name=SH03_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18530;old_locus_tag=SH03_18540 NZ_CP010441.1 Protein Homology CDS 3748542 3749474 . + 0 ID=cds3600;Parent=gene3696;Dbxref=Genbank:WP_000037992.1;Name=WP_000037992.1;gbkey=CDS;product=carbamate kinase-like protein YqeA;protein_id=WP_000037992.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3749695 3751320 . - . ID=gene3697;Name=SH03_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18535;old_locus_tag=SH03_18545 NZ_CP010441.1 Protein Homology CDS 3749695 3751320 . - 0 ID=cds3601;Parent=gene3697;Dbxref=Genbank:WP_001020381.1;Name=WP_001020381.1;gbkey=CDS;product=XdhC-CoxI family protein with NAD(P)-binding Rossman fold;protein_id=WP_001020381.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3751368 3752138 . - . ID=gene3698;Name=SH03_RS18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18540;old_locus_tag=SH03_18550 NZ_CP010441.1 Protein Homology CDS 3751368 3752138 . - 0 ID=cds3602;Parent=gene3698;Dbxref=Genbank:WP_001298920.1;Name=WP_001298920.1;gbkey=CDS;product=selenium-dependent hydroxylase accessory protein;protein_id=WP_001298920.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3752241 3752819 . + . ID=gene3699;Name=SH03_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18545;old_locus_tag=SH03_18555 NZ_CP010441.1 Protein Homology CDS 3752241 3752819 . + 0 ID=cds3603;Parent=gene3699;Dbxref=Genbank:WP_001272828.1;Name=WP_001272828.1;gbkey=CDS;product=molybdenum cofactor cytidylyltransferase;protein_id=WP_001272828.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3753141 3756239 . + . ID=gene3700;Name=SH03_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18550;old_locus_tag=SH03_18560 NZ_CP010441.1 Protein Homology CDS 3753141 3756239 . + 0 ID=cds3604;Parent=gene3700;Dbxref=Genbank:WP_000502395.1;Name=WP_000502395.1;Note=with YgfM and YgfN forms a selenate reductase%2C which seems to catalyze the reduction of selenate to selenite%3B YgfK mutants are unable to reduce selenate%3B involved in purine salvage process%3B seems to act as an oxidoreductase%2C but sequence similarity suggests it is a dihydrothymine dehydrogenase;gbkey=CDS;product=Fe-S subunit oxidoreductase subunit;protein_id=WP_000502395.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3756242 3757570 . + . ID=gene3701;Name=SH03_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18555;old_locus_tag=SH03_18565 NZ_CP010441.1 Protein Homology CDS 3756242 3757570 . + 0 ID=cds3605;Parent=gene3701;Dbxref=Genbank:WP_000906252.1;Name=WP_000906252.1;Note=in Escherichia coli expression is induced in response to phase-specific signals and controlled by RpoS;gbkey=CDS;product=protein SsnA;protein_id=WP_000906252.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3757621 3758400 . + . ID=gene3702;Name=SH03_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18560;old_locus_tag=SH03_18570 NZ_CP010441.1 Protein Homology CDS 3757621 3758400 . + 0 ID=cds3606;Parent=gene3702;Dbxref=Genbank:WP_000572462.1;Name=WP_000572462.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_000572462.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3758397 3761267 . + . ID=gene3703;Name=SH03_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18565;old_locus_tag=SH03_18575 NZ_CP010441.1 Protein Homology CDS 3758397 3761267 . + 0 ID=cds3607;Parent=gene3703;Dbxref=Genbank:WP_000583615.1;Name=WP_000583615.1;gbkey=CDS;product=hypoxanthine oxidase XdhD;protein_id=WP_000583615.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3761432 3762832 . + . ID=gene3704;Name=SH03_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18570;old_locus_tag=SH03_18580 NZ_CP010441.1 Protein Homology CDS 3761432 3762832 . + 0 ID=cds3608;Parent=gene3704;Dbxref=Genbank:WP_001280192.1;Name=WP_001280192.1;Note=high-affinity transporter for xanthine;gbkey=CDS;product=xanthine permease XanQ;protein_id=WP_001280192.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3762850 3764166 . + . ID=gene3705;Name=SH03_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18575;old_locus_tag=SH03_18585 NZ_CP010441.1 Protein Homology CDS 3762850 3764166 . + 0 ID=cds3609;Parent=gene3705;Dbxref=Genbank:WP_001336279.1;Name=WP_001336279.1;Note=Catalyzes the deamination of guanine;gbkey=CDS;product=guanine deaminase;protein_id=WP_001336279.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3764202 3765569 . + . ID=gene3706;Name=SH03_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18580;old_locus_tag=SH03_18590 NZ_CP010441.1 Protein Homology CDS 3764202 3765569 . + 0 ID=cds3610;Parent=gene3706;Dbxref=Genbank:WP_000012163.1;Name=WP_000012163.1;gbkey=CDS;product=guanine/hypoxanthine permease GhxQ;protein_id=WP_000012163.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3765605 3766093 . - . ID=gene3707;Name=SH03_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18585;old_locus_tag=SH03_18595 NZ_CP010441.1 Protein Homology CDS 3765605 3766093 . - 0 ID=cds3611;Parent=gene3707;Dbxref=Genbank:WP_000838428.1;Name=WP_000838428.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_000838428.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3766093 3768012 . - . ID=gene3708;Name=SH03_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18590;old_locus_tag=SH03_18600 NZ_CP010441.1 Protein Homology CDS 3766093 3768012 . - 0 ID=cds3612;Parent=gene3708;Dbxref=Genbank:WP_001350545.1;Name=WP_001350545.1;Note=unknown function%3B in E. coli the aegA gene is regulated by Fnr%2C NarXL%2C and NarQ (but not ArcA)%2C induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic);gbkey=CDS;product=oxidoreductase Fe-S subunit/nucleotide-binding subunit;protein_id=WP_001350545.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3768315 3768503 . + . ID=gene3709;Name=SH03_RS18595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS18595;pseudo=true NZ_CP010441.1 Protein Homology CDS 3768315 3768503 . + 0 ID=cds3613;Parent=gene3709;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:3768399..3768401%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq gene 3768448 3769896 . + . ID=gene3710;Name=SH03_RS18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18600;old_locus_tag=SH03_18610 NZ_CP010441.1 Protein Homology CDS 3768448 3769896 . + 0 ID=cds3614;Parent=gene3710;Dbxref=Genbank:WP_001295374.1;Name=WP_001295374.1;gbkey=CDS;product=uric acid transporter UacT;protein_id=WP_001295374.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3769898 3770023 . + . ID=gene3711;Name=SH03_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18605;old_locus_tag=SH03_18615 NZ_CP010441.1 Protein Homology CDS 3769898 3770023 . + 0 ID=cds3615;Parent=gene3711;Dbxref=Genbank:WP_001010156.1;Name=WP_001010156.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001010156.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3770146 3770694 . + . ID=gene3712;Name=SH03_RS18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18610;old_locus_tag=SH03_18620 NZ_CP010441.1 Protein Homology CDS 3770146 3770694 . + 0 ID=cds3616;Parent=gene3712;Dbxref=Genbank:WP_001192820.1;Name=WP_001192820.1;Note=catalyzes the rearrangement of isopentenyl diphosphate to dimethylallyl phosphate;gbkey=CDS;product=isopentenyl-diphosphate delta isomerase;protein_id=WP_001192820.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3770738 3772255 . - . ID=gene3713;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=SH03_RS18615;old_locus_tag=SH03_18625 NZ_CP010441.1 Protein Homology CDS 3770738 3772255 . - 0 ID=cds3617;Parent=gene3713;Dbxref=Genbank:WP_000003071.1;Name=WP_000003071.1;Note=class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1;gbkey=CDS;gene=lysS;product=lysine--tRNA ligase;protein_id=WP_000003071.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3772265 3773146 . - . ID=gene3714;Name=SH03_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18620;old_locus_tag=SH03_18630 NZ_CP010441.1 Protein Homology CDS 3772265 3773146 . - 0 ID=cds3618;Parent=gene3714;Dbxref=Genbank:WP_000808991.1;Name=WP_000808991.1;Note=catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA;gbkey=CDS;product=peptide chain release factor 2;protein_id=WP_000808991.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3773454 3775187 . - . ID=gene3715;Name=SH03_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18625;old_locus_tag=SH03_18635 NZ_CP010441.1 Protein Homology CDS 3773454 3775187 . - 0 ID=cds3619;Parent=gene3715;Dbxref=Genbank:WP_000813200.1;Name=WP_000813200.1;Note=5'-3' single-stranded-DNA-specific exonuclease;gbkey=CDS;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_000813200.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3775193 3775903 . - . ID=gene3716;Name=SH03_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18630;old_locus_tag=SH03_18640 NZ_CP010441.1 Protein Homology CDS 3775193 3775903 . - 0 ID=cds3620;Parent=gene3716;Dbxref=Genbank:WP_000715214.1;Name=WP_000715214.1;Note=DsbC%3B periplasmic protein with protein disulfide isomerase activity%3B this protein also shows disulfide oxidoreductase activity;gbkey=CDS;product=thiol:disulfide interchange protein DsbC;protein_id=WP_000715214.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3775928 3776824 . - . ID=gene3717;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=SH03_RS18635;old_locus_tag=SH03_18645 NZ_CP010441.1 Protein Homology CDS 3775928 3776824 . - 0 ID=cds3621;Parent=gene3717;Dbxref=Genbank:WP_000806638.1;Name=WP_000806638.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B XerD specifically exchanges the bottom strands%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerD;product=tyrosine recombinase XerD;protein_id=WP_000806638.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3776936 3777457 . + . ID=gene3718;Name=SH03_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18640;old_locus_tag=SH03_18650 NZ_CP010441.1 Protein Homology CDS 3776936 3777457 . + 0 ID=cds3622;Parent=gene3718;Dbxref=Genbank:WP_001055874.1;Name=WP_001055874.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic;gbkey=CDS;product=flavodoxin-2;protein_id=WP_001055874.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3777497 3777904 . - . ID=gene3719;Name=SH03_RS18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18645;old_locus_tag=SH03_18655 NZ_CP010441.1 Protein Homology CDS 3777497 3777904 . - 0 ID=cds3623;Parent=gene3719;Dbxref=Genbank:WP_000244777.1;Name=WP_000244777.1;gbkey=CDS;product=toxin CptA;protein_id=WP_000244777.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3777921 3778151 . - . ID=gene3720;Name=SH03_RS18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18650 NZ_CP010441.1 Protein Homology CDS 3777921 3778151 . - 0 ID=cds3624;Parent=gene3720;Dbxref=Genbank:WP_046377553.1;Name=WP_046377553.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_046377553.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3778394 3779374 . + . ID=gene3721;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=SH03_RS18655;old_locus_tag=SH03_18665 NZ_CP010441.1 Protein Homology CDS 3778394 3779374 . + 0 ID=cds3625;Parent=gene3721;Dbxref=Genbank:WP_000886062.1;Name=WP_000886062.1;Note=physiological role is not clear%3B not essential for growth but mutants grow poorly%3B mutations suppress hda null mutations%3B may be involved in regulation of ATP-DnaA levels%3B may also be involved in regulation of tRNA modifications%3B can bind folic acid and tetrahydrofolate%3B forms a three domain ring-like structure with a central channel%3B structurally similar to DMGO protein from A. globiformis%3B shows sequence similarity to yeast CAF17 transcriptional regulato%3B Hda supressor;gbkey=CDS;gene=ygfZ;product=tRNA-modifying protein YgfZ;protein_id=WP_000886062.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3779570 3780229 . - . ID=gene3722;Name=SH03_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18660;old_locus_tag=SH03_18670 NZ_CP010441.1 Protein Homology CDS 3779570 3780229 . - 0 ID=cds3626;Parent=gene3722;Dbxref=Genbank:WP_000250274.1;Name=WP_000250274.1;gbkey=CDS;product=hemolysin;protein_id=WP_000250274.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3780393 3780704 . - . ID=gene3723;Name=SH03_RS18665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18665;old_locus_tag=SH03_18675 NZ_CP010441.1 Protein Homology CDS 3780393 3780704 . - 0 ID=cds3627;Parent=gene3723;Dbxref=Genbank:WP_001182957.1;Name=WP_001182957.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001182957.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3780749 3782182 . + . ID=gene3724;Name=SH03_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18670;old_locus_tag=SH03_18680 NZ_CP010441.1 Protein Homology CDS 3780749 3782182 . + 0 ID=cds3628;Parent=gene3724;Dbxref=Genbank:WP_001336277.1;Name=WP_001336277.1;gbkey=CDS;product=6-phospho-beta-glucosidase;protein_id=WP_001336277.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3782239 3782982 . - . ID=gene3725;Name=SH03_RS18675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18675;old_locus_tag=SH03_18685 NZ_CP010441.1 Protein Homology CDS 3782239 3782982 . - 0 ID=cds3629;Parent=gene3725;Dbxref=Genbank:WP_000951964.1;Name=WP_000951964.1;gbkey=CDS;product=NAD(P)-dependent oxidoreductase;protein_id=WP_000951964.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3783249 3786122 . - . ID=gene3726;Name=SH03_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18680;old_locus_tag=SH03_18690 NZ_CP010441.1 Protein Homology CDS 3783249 3786122 . - 0 ID=cds3630;Parent=gene3726;Dbxref=Genbank:WP_000195062.1;Name=WP_000195062.1;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine;gbkey=CDS;product=glycine dehydrogenase (decarboxylating);protein_id=WP_000195062.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3786241 3786630 . - . ID=gene3727;Name=SH03_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18685;old_locus_tag=SH03_18695 NZ_CP010441.1 Protein Homology CDS 3786241 3786630 . - 0 ID=cds3631;Parent=gene3727;Dbxref=Genbank:WP_001295377.1;Name=WP_001295377.1;Note=part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor;gbkey=CDS;product=glycine cleavage system protein H;protein_id=WP_001295377.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3786654 3787748 . - . ID=gene3728;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=SH03_RS18690;old_locus_tag=SH03_18700 NZ_CP010441.1 Protein Homology CDS 3786654 3787748 . - 0 ID=cds3632;Parent=gene3728;Dbxref=Genbank:WP_000068701.1;Name=WP_000068701.1;Note=catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate%2C causing the release of ammonia and the generation of reduced GcvH protein;gbkey=CDS;gene=gcvT;product=aminomethyltransferase;protein_id=WP_000068701.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3788196 3789398 . - . ID=gene3729;Name=SH03_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18695;old_locus_tag=SH03_18705 NZ_CP010441.1 Protein Homology CDS 3788196 3789398 . - 0 ID=cds3633;Parent=gene3729;Dbxref=Genbank:WP_001192229.1;Name=WP_001192229.1;gbkey=CDS;product=2-octaprenylphenol hydroxylase;protein_id=WP_001192229.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3789421 3790599 . - . ID=gene3730;Name=SH03_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18700;old_locus_tag=SH03_18710 NZ_CP010441.1 Protein Homology CDS 3789421 3790599 . - 0 ID=cds3634;Parent=gene3730;Dbxref=Genbank:WP_000111195.1;Name=WP_000111195.1;Note=Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone;gbkey=CDS;product=2-octaprenyl-6-methoxyphenol hydroxylase;protein_id=WP_000111195.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3790596 3791921 . - . ID=gene3731;Name=SH03_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18705;old_locus_tag=SH03_18715 NZ_CP010441.1 Protein Homology CDS 3790596 3791921 . - 0 ID=cds3635;Parent=gene3731;Dbxref=Genbank:WP_001290136.1;Name=WP_001290136.1;Note=exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue%3B substrate can be as short as a dipeptide;gbkey=CDS;product=Xaa-Pro aminopeptidase;protein_id=WP_001290136.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3791947 3792531 . - . ID=gene3732;Name=SH03_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18710;old_locus_tag=SH03_18720 NZ_CP010441.1 Protein Homology CDS 3791947 3792531 . - 0 ID=cds3636;Parent=gene3732;Dbxref=Genbank:WP_000930123.1;Name=WP_000930123.1;Note=the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers%3B function unknown;gbkey=CDS;product=hypothetical protein;protein_id=WP_000930123.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3792693 3793022 . + . ID=gene3733;Name=SH03_RS18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18715;old_locus_tag=SH03_18725 NZ_CP010441.1 Protein Homology CDS 3792693 3793022 . + 0 ID=cds3637;Parent=gene3733;Dbxref=Genbank:WP_001276008.1;Name=WP_001276008.1;gbkey=CDS;product=cell division protein ZapA;protein_id=WP_001276008.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3793268 3793870 . + . ID=gene3734;Name=SH03_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18720;old_locus_tag=SH03_18730 NZ_CP010441.1 Protein Homology CDS 3793268 3793870 . + 0 ID=cds3638;Parent=gene3734;Dbxref=Genbank:WP_000192748.1;Name=WP_000192748.1;Note=ygfA expression increases five to eight fold in Escherichia coli cells growing as biofilms%3B unknown function;gbkey=CDS;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_000192748.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3794259 3795491 . - . ID=gene3735;Name=SH03_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18725;old_locus_tag=SH03_18735 NZ_CP010441.1 Protein Homology CDS 3794259 3795491 . - 0 ID=cds3639;Parent=gene3735;Dbxref=Genbank:WP_001151604.1;Name=WP_001151604.1;Note=catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis%3B can also reduce alpha ketoglutarate to form 2-hydroxyglutarate;gbkey=CDS;product=D-3-phosphoglycerate dehydrogenase;protein_id=WP_001151604.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3795747 3796406 . - . ID=gene3736;Name=SH03_RS18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18730;old_locus_tag=SH03_18740 NZ_CP010441.1 Protein Homology CDS 3795747 3796406 . - 0 ID=cds3640;Parent=gene3736;Dbxref=Genbank:WP_000189743.1;Name=WP_000189743.1;Note=catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway;gbkey=CDS;product=ribose-5-phosphate isomerase A;protein_id=WP_000189743.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3796462 3796692 . - . ID=gene3737;Name=SH03_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18735;old_locus_tag=SH03_18745 NZ_CP010441.1 Protein Homology CDS 3796462 3796692 . - 0 ID=cds3641;Parent=gene3737;Dbxref=Genbank:WP_000545308.1;Name=WP_000545308.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000545308.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3796834 3797727 . + . ID=gene3738;Name=SH03_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18740;old_locus_tag=SH03_18750 NZ_CP010441.1 Protein Homology CDS 3796834 3797727 . + 0 ID=cds3642;Parent=gene3738;Dbxref=Genbank:WP_000828351.1;Name=WP_000828351.1;Note=specific inhibitor of chromosomal initiation of replication in vitro%3B binds the three 13-mers in the origin (oriC) to block initiation of replication%3B also controls genes involved in arginine transport;gbkey=CDS;product=chromosome initiation inhibitor;protein_id=WP_000828351.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3797931 3800075 . + . ID=gene3739;Name=SH03_RS18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18745;old_locus_tag=SH03_18755 NZ_CP010441.1 Protein Homology CDS 3797931 3800075 . + 0 ID=cds3643;Parent=gene3739;Dbxref=Genbank:WP_000073223.1;Name=WP_000073223.1;gbkey=CDS;product=methylmalonyl-CoA mutase;protein_id=WP_000073223.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3800068 3801063 . + . ID=gene3740;Name=SH03_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18750;old_locus_tag=SH03_18760 NZ_CP010441.1 Protein Homology CDS 3800068 3801063 . + 0 ID=cds3644;Parent=gene3740;Dbxref=Genbank:WP_000606525.1;Name=WP_000606525.1;gbkey=CDS;product=GTPase ArgK;protein_id=WP_000606525.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3801074 3801859 . + . ID=gene3741;Name=SH03_RS18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18755;old_locus_tag=SH03_18765 NZ_CP010441.1 Protein Homology CDS 3801074 3801859 . + 0 ID=cds3645;Parent=gene3741;Dbxref=Genbank:WP_000122080.1;Name=WP_000122080.1;Note=catalyzes the formation of propanoyl-CoA from methylmalonyl-CoA;gbkey=CDS;product=methylmalonyl-CoA decarboxylase;protein_id=WP_000122080.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3801883 3803361 . + . ID=gene3742;Name=SH03_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18760;old_locus_tag=SH03_18770 NZ_CP010441.1 Protein Homology CDS 3801883 3803361 . + 0 ID=cds3646;Parent=gene3742;Dbxref=Genbank:WP_000449965.1;Name=WP_000449965.1;gbkey=CDS;product=propionyl-CoA--succinate CoA transferase;protein_id=WP_000449965.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3803358 3804254 . - . ID=gene3743;Name=SH03_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18765;old_locus_tag=SH03_18775 NZ_CP010441.1 Protein Homology CDS 3803358 3804254 . - 0 ID=cds3647;Parent=gene3743;Dbxref=Genbank:WP_000350807.1;Name=WP_000350807.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000350807.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3804421 3805161 . - . ID=gene3744;Name=SH03_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18770;old_locus_tag=SH03_18780 NZ_CP010441.1 Protein Homology CDS 3804421 3805161 . - 0 ID=cds3648;Parent=gene3744;Dbxref=Genbank:WP_000669834.1;Name=WP_000669834.1;gbkey=CDS;product=oxidative stress defense protein;protein_id=WP_000669834.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3805254 3805847 . - . ID=gene3745;Name=SH03_RS18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18775;old_locus_tag=SH03_18785 NZ_CP010441.1 Protein Homology CDS 3805254 3805847 . - 0 ID=cds3649;Parent=gene3745;Dbxref=Genbank:WP_001326499.1;Name=WP_001326499.1;Note=Involved in the export of arginine;gbkey=CDS;product=arginine exporter protein;protein_id=WP_001326499.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3806028 3806888 . - . ID=gene3746;Name=SH03_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18780;old_locus_tag=SH03_18790 NZ_CP010441.1 Protein Homology CDS 3806028 3806888 . - 0 ID=cds3650;Parent=gene3746;Dbxref=Genbank:WP_000389818.1;Name=WP_000389818.1;Note=participates in the regulation of osmotic pressure changes within the cel;gbkey=CDS;product=small-conductance mechanosensitive channel;protein_id=WP_000389818.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3807246 3808325 . - . ID=gene3747;Name=SH03_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18785;old_locus_tag=SH03_18795 NZ_CP010441.1 Protein Homology CDS 3807246 3808325 . - 0 ID=cds3651;Parent=gene3747;Dbxref=Genbank:WP_000034372.1;Name=WP_000034372.1;Note=catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate;gbkey=CDS;product=fructose-bisphosphate aldolase;protein_id=WP_000034372.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 3808351 3808479 . + . ID=id202;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 3808540 3809703 . - . ID=gene3748;Name=SH03_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18790;old_locus_tag=SH03_18800 NZ_CP010441.1 Protein Homology CDS 3808540 3809703 . - 0 ID=cds3652;Parent=gene3748;Dbxref=Genbank:WP_000111269.1;Name=WP_000111269.1;gbkey=CDS;product=phosphoglycerate kinase;protein_id=WP_000111269.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3809753 3810772 . - . ID=gene3749;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=SH03_RS18795;old_locus_tag=SH03_18805 NZ_CP010441.1 Protein Homology CDS 3809753 3810772 . - 0 ID=cds3653;Parent=gene3749;Dbxref=Genbank:WP_000218480.1;Name=WP_000218480.1;Note=required for glycolysis%3B catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate;gbkey=CDS;gene=gapA;product=D-erythrose-4-phosphate dehydrogenase;protein_id=WP_000218480.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3811057 3811770 . - . ID=gene3750;Name=SH03_RS18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18800;old_locus_tag=SH03_18810 NZ_CP010441.1 Protein Homology CDS 3811057 3811770 . - 0 ID=cds3654;Parent=gene3750;Dbxref=Genbank:WP_000687705.1;Name=WP_000687705.1;gbkey=CDS;product=PanK family P-loop kinase;protein_id=WP_000687705.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3811767 3812276 . - . ID=gene3751;Name=SH03_RS18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18805;old_locus_tag=SH03_18815 NZ_CP010441.1 Protein Homology CDS 3811767 3812276 . - 0 ID=cds3655;Parent=gene3751;Dbxref=Genbank:WP_000224147.1;Name=WP_000224147.1;gbkey=CDS;product=MtlR family transcriptional regulator;protein_id=WP_000224147.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3812298 3813263 . - . ID=gene3752;Name=SH03_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18810;old_locus_tag=SH03_18820 NZ_CP010441.1 Protein Homology CDS 3812298 3813263 . - 0 ID=cds3656;Parent=gene3752;Dbxref=Genbank:WP_000987283.1;Name=WP_000987283.1;gbkey=CDS;product=fructose 1%2C6-bisphosphatase;protein_id=WP_000987283.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3813260 3814537 . - . ID=gene3753;Name=SH03_RS18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18815;old_locus_tag=SH03_18825 NZ_CP010441.1 Protein Homology CDS 3813260 3814537 . - 0 ID=cds3657;Parent=gene3753;Dbxref=Genbank:WP_000853247.1;Name=WP_000853247.1;gbkey=CDS;product=Zn-binding dehydrogenase;protein_id=WP_000853247.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3814552 3815940 . - . ID=gene3754;Name=SH03_RS18820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18820;old_locus_tag=SH03_18830 NZ_CP010441.1 Protein Homology CDS 3814552 3815940 . - 0 ID=cds3658;Parent=gene3754;Dbxref=Genbank:WP_000428805.1;Name=WP_000428805.1;Note=CmtA with CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system%2C which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli%3B cytoplasmic protein;gbkey=CDS;product=PTS mannitol cryptic EIICB component;protein_id=WP_000428805.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3815968 3816411 . - . ID=gene3755;Name=cmtB;gbkey=Gene;gene=cmtB;gene_biotype=protein_coding;locus_tag=SH03_RS18825;old_locus_tag=SH03_18835 NZ_CP010441.1 Protein Homology CDS 3815968 3816411 . - 0 ID=cds3659;Parent=gene3755;Dbxref=Genbank:WP_001239650.1;Name=WP_001239650.1;Note=TolM%3B with CmtA (IIBC)%2C CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system%2C which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli%3B cytoplasmic protein;gbkey=CDS;gene=cmtB;product=mannitol-specific cryptic phosphotransferase enzyme IIA component;protein_id=WP_001239650.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3816725 3818716 . - . ID=gene3756;Name=SH03_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18830;old_locus_tag=SH03_18840 NZ_CP010441.1 Protein Homology CDS 3816725 3818716 . - 0 ID=cds3660;Parent=gene3756;Dbxref=Genbank:WP_000098614.1;Name=WP_000098614.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;product=transketolase;protein_id=WP_000098614.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3818994 3819752 . + . ID=gene3757;Name=SH03_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18835;old_locus_tag=SH03_18845 NZ_CP010441.1 Protein Homology CDS 3818994 3819752 . + 0 ID=cds3661;Parent=gene3757;Dbxref=Genbank:WP_001326497.1;Name=WP_001326497.1;gbkey=CDS;product=metalloprotease LoiP;protein_id=WP_001326497.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3819958 3820878 . - . ID=gene3758;Name=SH03_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18840;old_locus_tag=SH03_18850 NZ_CP010441.1 Protein Homology CDS 3819958 3820878 . - 0 ID=cds3662;Parent=gene3758;Dbxref=Genbank:WP_000105566.1;Name=WP_000105566.1;Note=catalyzes the formation of putrescine from agmatine;gbkey=CDS;product=agmatinase;protein_id=WP_000105566.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3821016 3822992 . - . ID=gene3759;Name=SH03_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18845;old_locus_tag=SH03_18855 NZ_CP010441.1 Protein Homology CDS 3821016 3822992 . - 0 ID=cds3663;Parent=gene3759;Dbxref=Genbank:WP_001300904.1;Name=WP_001300904.1;Note=catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis;gbkey=CDS;product=biosynthetic arginine decarboxylase;protein_id=WP_001300904.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3823001 3823132 . - . ID=gene3760;Name=SH03_RS18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18850;old_locus_tag=SH03_18860 NZ_CP010441.1 Protein Homology CDS 3823001 3823132 . - 0 ID=cds3664;Parent=gene3760;Dbxref=Genbank:WP_001297406.1;Name=WP_001297406.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001297406.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3823268 3823483 . + . ID=gene3761;Name=SH03_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18855;old_locus_tag=SH03_18865 NZ_CP010441.1 Protein Homology CDS 3823268 3823483 . + 0 ID=cds3665;Parent=gene3761;Dbxref=Genbank:WP_001303650.1;Name=WP_001303650.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001303650.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3823480 3823731 . - . ID=gene3762;Name=SH03_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18860;old_locus_tag=SH03_18870 NZ_CP010441.1 Protein Homology CDS 3823480 3823731 . - 0 ID=cds3666;Parent=gene3762;Dbxref=Genbank:WP_001326496.1;Name=WP_001326496.1;gbkey=CDS;product=membrane protein;protein_id=WP_001326496.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3823787 3824941 . + . ID=gene3763;Name=SH03_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18865;old_locus_tag=SH03_18875 NZ_CP010441.1 Protein Homology CDS 3823787 3824941 . + 0 ID=cds3667;Parent=gene3763;Dbxref=Genbank:WP_001062128.1;Name=WP_001062128.1;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;gbkey=CDS;product=S-adenosylmethionine synthase;protein_id=WP_001062128.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3825365 3826759 . + . ID=gene3764;Name=SH03_RS18870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS18870;pseudo=true NZ_CP010441.1 Protein Homology CDS 3825365 3826759 . + 0 ID=cds3668;Parent=gene3764;gbkey=CDS;product=D-galactose transporter GalP;pseudo=true;transl_except=(pos:3826190..3826192%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq gene 3826836 3827333 . + . ID=gene3765;Name=SH03_RS18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18875;old_locus_tag=SH03_18885 NZ_CP010441.1 Protein Homology CDS 3826836 3827333 . + 0 ID=cds3669;Parent=gene3765;Dbxref=Genbank:WP_001300769.1;Name=WP_001300769.1;gbkey=CDS;product=protein SprT;protein_id=WP_001300769.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3827428 3828135 . + . ID=gene3766;Name=SH03_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18880;old_locus_tag=SH03_18890 NZ_CP010441.1 Protein Homology CDS 3827428 3828135 . + 0 ID=cds3670;Parent=gene3766;Dbxref=Genbank:WP_000286500.1;Name=WP_000286500.1;gbkey=CDS;product=endonuclease-1;protein_id=WP_000286500.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3828215 3828946 . + . ID=gene3767;Name=SH03_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18885;old_locus_tag=SH03_18895 NZ_CP010441.1 Protein Homology CDS 3828215 3828946 . + 0 ID=cds3671;Parent=gene3767;Dbxref=Genbank:WP_001222509.1;Name=WP_001222509.1;Note=in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA%3B cells lacking this function can grow%2C but are outcompeted by wild-type%3B SAM-dependent m(3)U1498 methyltransferase;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase E;protein_id=WP_001222509.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3828959 3829909 . + . ID=gene3768;Name=SH03_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18890;old_locus_tag=SH03_18900 NZ_CP010441.1 Protein Homology CDS 3828959 3829909 . + 0 ID=cds3672;Parent=gene3768;Dbxref=Genbank:WP_000593273.1;Name=WP_000593273.1;Note=catalyzes the second step in the glutathione biosynthesis pathway%2C where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine %3D ADP + phosphate + glutathione;gbkey=CDS;product=glutathione synthetase;protein_id=WP_000593273.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3830018 3830581 . + . ID=gene3769;Name=SH03_RS18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18895;old_locus_tag=SH03_18905 NZ_CP010441.1 Protein Homology CDS 3830018 3830581 . + 0 ID=cds3673;Parent=gene3769;Dbxref=Genbank:WP_001053178.1;Name=WP_001053178.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001053178.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3830581 3830997 . + . ID=gene3770;Name=SH03_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18900;old_locus_tag=SH03_18910 NZ_CP010441.1 Protein Homology CDS 3830581 3830997 . + 0 ID=cds3674;Parent=gene3770;Dbxref=Genbank:WP_000017106.1;Name=WP_000017106.1;Note=similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function;gbkey=CDS;product=Holliday junction DNA helicase;protein_id=WP_000017106.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3831181 3832161 . - . ID=gene3771;Name=SH03_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18905;old_locus_tag=SH03_18915 NZ_CP010441.1 Protein Homology CDS 3831181 3832161 . - 0 ID=cds3675;Parent=gene3771;Dbxref=Genbank:WP_001326494.1;Name=WP_001326494.1;gbkey=CDS;product=PilT family AAA+ ATPase;protein_id=WP_001326494.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3832179 3832883 . + . ID=gene3772;Name=SH03_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18910;old_locus_tag=SH03_18920 NZ_CP010441.1 Protein Homology CDS 3832179 3832883 . + 0 ID=cds3676;Parent=gene3772;Dbxref=Genbank:WP_000997795.1;Name=WP_000997795.1;gbkey=CDS;product=YggS family pyridoxal phosphate enzyme;protein_id=WP_000997795.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3832901 3833467 . + . ID=gene3773;Name=SH03_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18915;old_locus_tag=SH03_18925 NZ_CP010441.1 Protein Homology CDS 3832901 3833467 . + 0 ID=cds3677;Parent=gene3773;Dbxref=Genbank:WP_001094831.1;Name=WP_001094831.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001094831.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3833464 3833754 . + . ID=gene3774;Name=SH03_RS18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18920;old_locus_tag=SH03_18930 NZ_CP010441.1 Protein Homology CDS 3833464 3833754 . + 0 ID=cds3678;Parent=gene3774;Dbxref=Genbank:WP_000994920.1;Name=WP_000994920.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000994920.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3833762 3834355 . + . ID=gene3775;Name=SH03_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18925;old_locus_tag=SH03_18935 NZ_CP010441.1 Protein Homology CDS 3833762 3834355 . + 0 ID=cds3679;Parent=gene3775;Dbxref=Genbank:WP_001174777.1;Name=WP_001174777.1;Note=HAM1-like protein%3B Rec-dependent growth%3B RgdB%3B yggV%3B it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine;gbkey=CDS;product=non-canonical purine NTP pyrophosphatase;protein_id=WP_001174777.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3834348 3835484 . + . ID=gene3776;Name=SH03_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18930;old_locus_tag=SH03_18940 NZ_CP010441.1 Protein Homology CDS 3834348 3835484 . + 0 ID=cds3680;Parent=gene3776;Dbxref=Genbank:WP_000239943.1;Name=WP_000239943.1;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_000239943.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3835639 3836646 . - . ID=gene3777;Name=SH03_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18935;old_locus_tag=SH03_18945 NZ_CP010441.1 Protein Homology CDS 3835639 3836646 . - 0 ID=cds3681;Parent=gene3777;Dbxref=Genbank:WP_000745210.1;Name=WP_000745210.1;gbkey=CDS;product=DUF1202 domain-containing protein;protein_id=WP_000745210.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3836763 3837809 . - . ID=gene3778;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=SH03_RS18940;old_locus_tag=SH03_18950 NZ_CP010441.1 Protein Homology CDS 3836763 3837809 . - 0 ID=cds3682;Parent=gene3778;Dbxref=Genbank:WP_000394140.1;Name=WP_000394140.1;Note=catalyzes the formation of aspartate from asparagine%2C periplasmic%3B regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis;gbkey=CDS;gene=ansB;product=L-asparaginase 2;protein_id=WP_000394140.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3837985 3838704 . - . ID=gene3779;Name=SH03_RS18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18945;old_locus_tag=SH03_18955 NZ_CP010441.1 Protein Homology CDS 3837985 3838704 . - 0 ID=cds3683;Parent=gene3779;Dbxref=Genbank:WP_000984796.1;Name=WP_000984796.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000984796.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3838725 3838865 . - . ID=gene3780;Name=SH03_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18950;old_locus_tag=SH03_18960 NZ_CP010441.1 Protein Homology CDS 3838725 3838865 . - 0 ID=cds3684;Parent=gene3780;Dbxref=Genbank:WP_001178593.1;Name=WP_001178593.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001178593.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3838888 3839214 . - . ID=gene3781;Name=SH03_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18955;old_locus_tag=SH03_18965 NZ_CP010441.1 Protein Homology CDS 3838888 3839214 . - 0 ID=cds3685;Parent=gene3781;Dbxref=Genbank:WP_001107564.1;Name=WP_001107564.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001107564.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3839214 3839933 . - . ID=gene3782;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;gene_synonym=yggH;locus_tag=SH03_RS18960;old_locus_tag=SH03_18970 NZ_CP010441.1 Protein Homology CDS 3839214 3839933 . - 0 ID=cds3686;Parent=gene3782;Dbxref=Genbank:WP_000786911.1;Name=WP_000786911.1;Note=tRNA (guanine-N(7)-)-methyltransferase%3B catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine;gbkey=CDS;gene=trmB;product=tRNA (guanine-N(7)-)-methyltransferase;protein_id=WP_000786911.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3840094 3841146 . + . ID=gene3783;Name=SH03_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18965;old_locus_tag=SH03_18975 NZ_CP010441.1 Protein Homology CDS 3840094 3841146 . + 0 ID=cds3687;Parent=gene3783;Dbxref=Genbank:WP_001321419.1;Name=WP_001321419.1;gbkey=CDS;product=A/G-specific adenine glycosylase;protein_id=WP_001321419.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3841174 3841449 . + . ID=gene3784;Name=SH03_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18970;old_locus_tag=SH03_18980 NZ_CP010441.1 Protein Homology CDS 3841174 3841449 . + 0 ID=cds3688;Parent=gene3784;Dbxref=Genbank:WP_000091700.1;Name=WP_000091700.1;Note=protects iron-sulfur proteins against oxidative damage;gbkey=CDS;product=Fe(2+)-trafficking protein;protein_id=WP_000091700.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3841514 3842593 . + . ID=gene3785;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=SH03_RS18975;old_locus_tag=SH03_18985 NZ_CP010441.1 Protein Homology CDS 3841514 3842593 . + 0 ID=cds3689;Parent=gene3785;Dbxref=Genbank:WP_000760323.1;Name=WP_000760323.1;Note=Murein hydrolase C%3B membrane-bound%3B lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltC;product=murein transglycosylase;protein_id=WP_000760323.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3842795 3844051 . + . ID=gene3786;Name=SH03_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18980;old_locus_tag=SH03_18990 NZ_CP010441.1 Protein Homology CDS 3842795 3844051 . + 0 ID=cds3690;Parent=gene3786;Dbxref=Genbank:WP_001049791.1;Name=WP_001049791.1;gbkey=CDS;product=nucleoside permease NupG;protein_id=WP_001049791.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3844101 3846236 . - . ID=gene3787;Name=SH03_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18985;old_locus_tag=SH03_18995 NZ_CP010441.1 Protein Homology CDS 3844101 3846236 . - 0 ID=cds3691;Parent=gene3787;Dbxref=Genbank:WP_001326492.1;Name=WP_001326492.1;gbkey=CDS;product=ornithine decarboxylase;protein_id=WP_001326492.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3846634 3847341 . + . ID=gene3788;Name=SH03_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS18990;old_locus_tag=SH03_19000 NZ_CP010441.1 Protein Homology CDS 3846634 3847341 . + 0 ID=cds3692;Parent=gene3788;Dbxref=Genbank:WP_000234514.1;Name=WP_000234514.1;gbkey=CDS;product=DUF554 domain-containing protein;protein_id=WP_000234514.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3847447 3847522 . + . ID=gene3789;Name=SH03_RS18995;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS18995;old_locus_tag=SH03_19005 NZ_CP010441.1 tRNAscan-SE tRNA 3847447 3847522 . + . ID=rna96;Parent=gene3789;anticodon=(pos:3847480..3847482);gbkey=tRNA;product=tRNA-Phe NZ_CP010441.1 tRNAscan-SE exon 3847447 3847522 . + . ID=id203;Parent=rna96;anticodon=(pos:3847480..3847482);gbkey=tRNA;product=tRNA-Phe NZ_CP010441.1 RefSeq gene 3847671 3848207 . - . ID=gene3790;Name=SH03_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19000;old_locus_tag=SH03_19010 NZ_CP010441.1 Protein Homology CDS 3847671 3848207 . - 0 ID=cds3693;Parent=gene3790;Dbxref=Genbank:WP_000942785.1;Name=WP_000942785.1;gbkey=CDS;product=membrane-anchored secretion pathway M-type protein;protein_id=WP_000942785.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3848209 3849069 . - . ID=gene3791;Name=SH03_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19005;old_locus_tag=SH03_19015 NZ_CP010441.1 Protein Homology CDS 3848209 3849069 . - 0 ID=cds3694;Parent=gene3791;Dbxref=Genbank:WP_001393563.1;Name=WP_001393563.1;gbkey=CDS;product=type II secretion system protein GspL;protein_id=WP_001393563.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3849135 3850130 . - . ID=gene3792;Name=SH03_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19010;old_locus_tag=SH03_19020 NZ_CP010441.1 Protein Homology CDS 3849135 3850130 . - 0 ID=cds3695;Parent=gene3792;Dbxref=Genbank:WP_000135077.1;Name=WP_000135077.1;Note=part of the general (type II) secretion pathway (GSP)%2C a signal sequence-dependent process responsible for protein export%3B involved in trans-location of exoproteins from the cytoplasm to the periplasm;gbkey=CDS;product=type II secretion system protein GspC;protein_id=WP_000135077.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3850148 3850558 . - . ID=gene3793;Name=SH03_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19015;old_locus_tag=SH03_19025 NZ_CP010441.1 Protein Homology CDS 3850148 3850558 . - 0 ID=cds3696;Parent=gene3793;Dbxref=Genbank:WP_001324279.1;Name=WP_001324279.1;gbkey=CDS;product=secretin (GspDbeta) OM localization lipoprotein pilotin;protein_id=WP_001324279.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3850624 3851433 . - . ID=gene3794;Name=SH03_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19020;old_locus_tag=SH03_19030 NZ_CP010441.1 Protein Homology CDS 3850624 3851433 . - 0 ID=cds3697;Parent=gene3794;Dbxref=Genbank:WP_001333829.1;Name=WP_001333829.1;gbkey=CDS;product=leader peptidase PppA;protein_id=WP_001333829.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3851631 3856193 . - . ID=gene3795;Name=SH03_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19025;old_locus_tag=SH03_19035 NZ_CP010441.1 Protein Homology CDS 3851631 3856193 . - 0 ID=cds3698;Parent=gene3795;Dbxref=Genbank:WP_001034469.1;Name=WP_001034469.1;gbkey=CDS;product=and surface-associated lipoprotein mucinase;protein_id=WP_001034469.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3856344 3856526 . + . ID=gene3796;Name=SH03_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19030;old_locus_tag=SH03_19040 NZ_CP010441.1 Protein Homology CDS 3856344 3856526 . + 0 ID=cds3699;Parent=gene3796;Dbxref=Genbank:WP_001311126.1;Name=WP_001311126.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001311126.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3856678 3858360 . - . ID=gene3797;Name=SH03_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19035;old_locus_tag=SH03_19045 NZ_CP010441.1 Protein Homology CDS 3856678 3858360 . - 0 ID=cds3700;Parent=gene3797;Dbxref=Genbank:WP_000259302.1;Name=WP_000259302.1;gbkey=CDS;product=glycolate permease GlcA;protein_id=WP_000259302.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3858715 3860886 . - . ID=gene3798;Name=SH03_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19040;old_locus_tag=SH03_19050 NZ_CP010441.1 Protein Homology CDS 3858715 3860886 . - 0 ID=cds3701;Parent=gene3798;Dbxref=Genbank:WP_000084131.1;Name=WP_000084131.1;gbkey=CDS;product=malate synthase G;protein_id=WP_000084131.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3860908 3861312 . - . ID=gene3799;Name=SH03_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19045;old_locus_tag=SH03_19055 NZ_CP010441.1 Protein Homology CDS 3860908 3861312 . - 0 ID=cds3702;Parent=gene3799;Dbxref=Genbank:WP_000853256.1;Name=WP_000853256.1;gbkey=CDS;product=protein GlcG;protein_id=WP_000853256.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3861317 3862540 . - . ID=gene3800;Name=glcF;gbkey=Gene;gene=glcF;gene_biotype=protein_coding;locus_tag=SH03_RS19050;old_locus_tag=SH03_19060 NZ_CP010441.1 Protein Homology CDS 3861317 3862540 . - 0 ID=cds3703;Parent=gene3800;Dbxref=Genbank:WP_001194661.1;Name=WP_001194661.1;gbkey=CDS;gene=glcF;product=glycolate oxidase;protein_id=WP_001194661.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3862551 3863603 . - . ID=gene3801;Name=glcE;gbkey=Gene;gene=glcE;gene_biotype=protein_coding;locus_tag=SH03_RS19055;old_locus_tag=SH03_19065 NZ_CP010441.1 Protein Homology CDS 3862551 3863603 . - 0 ID=cds3704;Parent=gene3801;Dbxref=Genbank:WP_000943100.1;Name=WP_000943100.1;gbkey=CDS;gene=glcE;product=glycolate oxidase;protein_id=WP_000943100.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3863603 3865102 . - . ID=gene3802;Name=SH03_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19060;old_locus_tag=SH03_19070 NZ_CP010441.1 Protein Homology CDS 3863603 3865102 . - 0 ID=cds3705;Parent=gene3802;Dbxref=Genbank:WP_000026117.1;Name=WP_000026117.1;gbkey=CDS;product=glycolate oxidase;protein_id=WP_000026117.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3865353 3866117 . + . ID=gene3803;Name=SH03_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19065;old_locus_tag=SH03_19075 NZ_CP010441.1 Protein Homology CDS 3865353 3866117 . + 0 ID=cds3706;Parent=gene3803;Dbxref=Genbank:WP_001297764.1;Name=WP_001297764.1;gbkey=CDS;product=glc operon transcriptional activator;protein_id=WP_001297764.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3866124 3867260 . - . ID=gene3804;Name=SH03_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19070;old_locus_tag=SH03_19080 NZ_CP010441.1 Protein Homology CDS 3866124 3867260 . - 0 ID=cds3707;Parent=gene3804;Dbxref=Genbank:WP_000626849.1;Name=WP_000626849.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_000626849.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 3867220 3868427 . + . ID=id204;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 3867295 3868275 . + . ID=gene3805;Name=SH03_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19075;old_locus_tag=SH03_19085 NZ_CP010441.1 Protein Homology CDS 3867295 3868275 . + 0 ID=cds3708;Parent=gene3805;Dbxref=Genbank:WP_000019403.1;Name=WP_000019403.1;gbkey=CDS;product=transposase;protein_id=WP_000019403.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3868422 3869489 . - . ID=gene3806;Name=SH03_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19080;old_locus_tag=SH03_19090 NZ_CP010441.1 Protein Homology CDS 3868422 3869489 . - 0 ID=cds3709;Parent=gene3806;Dbxref=Genbank:WP_000896895.1;Name=WP_000896895.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000896895.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3869535 3870293 . - . ID=gene3807;Name=SH03_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19085;old_locus_tag=SH03_19095 NZ_CP010441.1 Protein Homology CDS 3869535 3870293 . - 0 ID=cds3710;Parent=gene3807;Dbxref=Genbank:WP_000339531.1;Name=WP_000339531.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_000339531.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3870325 3871023 . - . ID=gene3808;Name=SH03_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19090;old_locus_tag=SH03_19100 NZ_CP010441.1 Protein Homology CDS 3870325 3871023 . - 0 ID=cds3711;Parent=gene3808;Dbxref=Genbank:WP_001325884.1;Name=WP_001325884.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001325884.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3871212 3871904 . + . ID=gene3809;Name=SH03_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19095;old_locus_tag=SH03_19105 NZ_CP010441.1 Protein Homology CDS 3871212 3871904 . + 0 ID=cds3712;Parent=gene3809;Dbxref=Genbank:WP_001190781.1;Name=WP_001190781.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_001190781.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3871953 3873452 . - . ID=gene3810;Name=SH03_RS19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19100;old_locus_tag=SH03_19110 NZ_CP010441.1 Protein Homology CDS 3871953 3873452 . - 0 ID=cds3713;Parent=gene3810;Dbxref=Genbank:WP_000933250.1;Name=WP_000933250.1;Note=involved in the transport of inorganic phosphate;gbkey=CDS;product=low-affinity inorganic phosphate transporter 2;protein_id=WP_000933250.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3873744 3875603 . - . ID=gene3811;Name=SH03_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19105;old_locus_tag=SH03_19115 NZ_CP010441.1 Protein Homology CDS 3873744 3875603 . - 0 ID=cds3714;Parent=gene3811;Dbxref=Genbank:WP_001297309.1;Name=WP_001297309.1;Note=catalyzes the formation of glutathionylspermidine from glutathione and spermidine%3B also catalyzes the reverse reaction;gbkey=CDS;product=bifunctional glutathionylspermidine synthetase/amidase;protein_id=WP_001297309.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3875808 3876674 . + . ID=gene3812;Name=SH03_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19110;old_locus_tag=SH03_19120 NZ_CP010441.1 Protein Homology CDS 3875808 3876674 . + 0 ID=cds3715;Parent=gene3812;Dbxref=Genbank:WP_001295515.1;Name=WP_001295515.1;Note=YghU%3B B2989%3B one of eight putative glutathione transferase proteins from E. coli;gbkey=CDS;product=disulfide-bond oxidoreductase YghU;protein_id=WP_001295515.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3876797 3877045 . - . ID=gene3813;Name=SH03_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19115;old_locus_tag=SH03_19125 NZ_CP010441.1 Protein Homology CDS 3876797 3877045 . - 0 ID=cds3716;Parent=gene3813;Dbxref=Genbank:WP_000334896.1;Name=WP_000334896.1;gbkey=CDS;product=hydrogenase-2 operon protein HybG;protein_id=WP_000334896.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3877058 3877399 . - . ID=gene3814;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=SH03_RS19120;old_locus_tag=SH03_19130 NZ_CP010441.1 Protein Homology CDS 3877058 3877399 . - 0 ID=cds3717;Parent=gene3814;Dbxref=Genbank:WP_000544953.1;Name=WP_000544953.1;Note=plays a role in hydrogenase nickel cofactor insertion;gbkey=CDS;gene=hypA;product=hydrogenase nickel incorporation protein;protein_id=WP_000544953.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3877392 3877880 . - . ID=gene3815;Name=SH03_RS19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19125;old_locus_tag=SH03_19135 NZ_CP010441.1 Protein Homology CDS 3877392 3877880 . - 0 ID=cds3718;Parent=gene3815;Dbxref=Genbank:WP_000134014.1;Name=WP_000134014.1;gbkey=CDS;product=hydrogenase-2 operon protein HybE;protein_id=WP_000134014.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3877873 3878367 . - . ID=gene3816;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=SH03_RS19130;old_locus_tag=SH03_19140 NZ_CP010441.1 Protein Homology CDS 3877873 3878367 . - 0 ID=cds3719;Parent=gene3816;Dbxref=Genbank:WP_001221939.1;Name=WP_001221939.1;Note=protease responsible for the cleavage of a 15 amino acid peptide from the C-terminal end of the large subunit of hydrogenase 2 (HybC);gbkey=CDS;gene=hybD;product=hydrogenase 2 maturation protease;protein_id=WP_001221939.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3878367 3880070 . - . ID=gene3817;Name=SH03_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19135;old_locus_tag=SH03_19145 NZ_CP010441.1 Protein Homology CDS 3878367 3880070 . - 0 ID=cds3720;Parent=gene3817;Dbxref=Genbank:WP_000083065.1;Name=WP_000083065.1;Note=involved in hydrogen uptake;gbkey=CDS;product=hydrogenase-2 large chain;protein_id=WP_000083065.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3880067 3881245 . - . ID=gene3818;Name=SH03_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19140;old_locus_tag=SH03_19150 NZ_CP010441.1 Protein Homology CDS 3880067 3881245 . - 0 ID=cds3721;Parent=gene3818;Dbxref=Genbank:WP_000017703.1;Name=WP_000017703.1;Note=HybB%3B cytochrome b subunit of the hydrogenase 2 enzyme%2C composed of HybA%2C B%2C C%2C and O subunits;gbkey=CDS;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_000017703.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3881235 3882221 . - . ID=gene3819;Name=SH03_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19145;old_locus_tag=SH03_19155 NZ_CP010441.1 Protein Homology CDS 3881235 3882221 . - 0 ID=cds3722;Parent=gene3819;Dbxref=Genbank:WP_001081870.1;Name=WP_001081870.1;Note=Fe-S ferrodoxin type component%3B participates in the periplasmic electron-transferring activity of hydrogenase 2;gbkey=CDS;product=hydrogenase-2 operon protein HybA;protein_id=WP_001081870.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3882224 3883342 . - . ID=gene3820;Name=SH03_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19150;old_locus_tag=SH03_19160 NZ_CP010441.1 Protein Homology CDS 3882224 3883342 . - 0 ID=cds3723;Parent=gene3820;Dbxref=Genbank:WP_000145410.1;Name=WP_000145410.1;Note=involved in hydrogen uptake;gbkey=CDS;product=hydrogenase-2 small chain;protein_id=WP_000145410.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3883349 3883534 . - . ID=gene3821;Name=SH03_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19155;old_locus_tag=SH03_19165 NZ_CP010441.1 Protein Homology CDS 3883349 3883534 . - 0 ID=cds3724;Parent=gene3821;Dbxref=Genbank:WP_001303662.1;Name=WP_001303662.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001303662.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3883531 3883818 . - . ID=gene3822;Name=SH03_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19160;old_locus_tag=SH03_19170 NZ_CP010441.1 Protein Homology CDS 3883531 3883818 . - 0 ID=cds3725;Parent=gene3822;Dbxref=Genbank:WP_001059136.1;Name=WP_001059136.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001059136.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3883937 3884821 . - . ID=gene3823;Name=SH03_RS19165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS19165;pseudo=true NZ_CP010441.1 Protein Homology CDS 3883937 3884821 . - 0 ID=cds3726;Parent=gene3823;exception=annotated by transcript or proteomic data;gbkey=CDS;product=dienelactone hydrolase;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 3884978 3886018 . + . ID=gene3824;Name=SH03_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19170;old_locus_tag=SH03_19180 NZ_CP010441.1 Protein Homology CDS 3884978 3886018 . + 0 ID=cds3727;Parent=gene3824;Dbxref=Genbank:WP_000262172.1;Name=WP_000262172.1;gbkey=CDS;product=glyceraldehyde 3-phosphate reductase;protein_id=WP_000262172.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3886058 3886552 . - . ID=gene3825;Name=SH03_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19175;old_locus_tag=SH03_19185 NZ_CP010441.1 Protein Homology CDS 3886058 3886552 . - 0 ID=cds3728;Parent=gene3825;Dbxref=Genbank:WP_000439331.1;Name=WP_000439331.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000439331.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3886743 3887627 . + . ID=gene3826;Name=SH03_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19180;old_locus_tag=SH03_19190 NZ_CP010441.1 Protein Homology CDS 3886743 3887627 . + 0 ID=cds3729;Parent=gene3826;Dbxref=Genbank:WP_000018760.1;Name=WP_000018760.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_000018760.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3887899 3888324 . - . ID=gene3827;Name=SH03_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19185;old_locus_tag=SH03_19195 NZ_CP010441.1 Protein Homology CDS 3887899 3888324 . - 0 ID=cds3730;Parent=gene3827;Dbxref=Genbank:WP_001240712.1;Name=WP_001240712.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;gbkey=CDS;product=biopolymer transporter ExbD;protein_id=WP_001240712.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3888331 3889065 . - . ID=gene3828;Name=SH03_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19190;old_locus_tag=SH03_19200 NZ_CP010441.1 Protein Homology CDS 3888331 3889065 . - 0 ID=cds3731;Parent=gene3828;Dbxref=Genbank:WP_000527844.1;Name=WP_000527844.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;gbkey=CDS;product=biopolymer transporter ExbB;protein_id=WP_000527844.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3889058 3889195 . - . ID=gene3829;Name=SH03_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19195;old_locus_tag=SH03_19205 NZ_CP010441.1 Protein Homology CDS 3889058 3889195 . - 0 ID=cds3732;Parent=gene3829;Dbxref=Genbank:WP_024167679.1;Name=WP_024167679.1;gbkey=CDS;product=membrane protein;protein_id=WP_024167679.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3889317 3890504 . + . ID=gene3830;Name=SH03_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19200;old_locus_tag=SH03_19210 NZ_CP010441.1 Protein Homology CDS 3889317 3890504 . + 0 ID=cds3733;Parent=gene3830;Dbxref=Genbank:WP_001301079.1;Name=WP_001301079.1;Note=catalyzes the formation of L-homocysteine from cystathionine;gbkey=CDS;product=cystathionine beta-lyase MetC;protein_id=WP_001301079.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3890644 3891303 . + . ID=gene3831;Name=SH03_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19205;old_locus_tag=SH03_19215 NZ_CP010441.1 Protein Homology CDS 3890644 3891303 . + 0 ID=cds3734;Parent=gene3831;Dbxref=Genbank:WP_000268419.1;Name=WP_000268419.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000268419.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3891343 3892242 . - . ID=gene3832;Name=SH03_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19210;old_locus_tag=SH03_19220 NZ_CP010441.1 Protein Homology CDS 3891343 3892242 . - 0 ID=cds3735;Parent=gene3832;Dbxref=Genbank:WP_001407451.1;Name=WP_001407451.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_001407451.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3892239 3892385 . - . ID=gene3833;Name=SH03_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19215;old_locus_tag=SH03_19225 NZ_CP010441.1 Protein Homology CDS 3892239 3892385 . - 0 ID=cds3736;Parent=gene3833;Dbxref=Genbank:WP_001298764.1;Name=WP_001298764.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001298764.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3892436 3893599 . + . ID=gene3834;Name=SH03_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19220;old_locus_tag=SH03_19230 NZ_CP010441.1 Protein Homology CDS 3892436 3893599 . + 0 ID=cds3737;Parent=gene3834;Dbxref=Genbank:WP_001058802.1;Name=WP_001058802.1;gbkey=CDS;product=alcohol dehydrogenase;protein_id=WP_001058802.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3893704 3894531 . + . ID=gene3835;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=SH03_RS19225;old_locus_tag=SH03_19235 NZ_CP010441.1 Protein Homology CDS 3893704 3894531 . + 0 ID=cds3738;Parent=gene3835;Dbxref=Genbank:WP_000013149.1;Name=WP_000013149.1;Note=methylglyoxal reductase/beta-keto ester reductase%3B catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid%3B also catalyzes the reduction of methylglyoxal%2C ethyl-2-methylacetoacetate and ethyl-acetoacetate;gbkey=CDS;gene=dkgA;product=2%2C5-diketo-D-gluconic acid reductase A;protein_id=WP_000013149.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3894731 3895657 . + . ID=gene3836;Name=SH03_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19230;old_locus_tag=SH03_19240 NZ_CP010441.1 Protein Homology CDS 3894731 3895657 . + 0 ID=cds3739;Parent=gene3836;Dbxref=Genbank:WP_000691619.1;Name=WP_000691619.1;gbkey=CDS;product=DUF3828 domain-containing protein;protein_id=WP_000691619.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3895708 3895965 . + . ID=gene3837;Name=SH03_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19235;old_locus_tag=SH03_19245 NZ_CP010441.1 Protein Homology CDS 3895708 3895965 . + 0 ID=cds3740;Parent=gene3837;Dbxref=Genbank:WP_000848528.1;Name=WP_000848528.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000848528.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3896008 3898227 . - . ID=gene3838;Name=SH03_RS19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19240;old_locus_tag=SH03_19250 NZ_CP010441.1 Protein Homology CDS 3896008 3898227 . - 0 ID=cds3741;Parent=gene3838;Dbxref=Genbank:WP_000095187.1;Name=WP_000095187.1;gbkey=CDS;product=Radical SAM superfamily protein;protein_id=WP_000095187.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3898338 3899750 . - . ID=gene3839;Name=SH03_RS19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19245;old_locus_tag=SH03_19255 NZ_CP010441.1 Protein Homology CDS 3898338 3899750 . - 0 ID=cds3742;Parent=gene3839;Dbxref=Genbank:WP_038432656.1;Name=WP_038432656.1;Note=septal ring component that protects the divisome from stress;gbkey=CDS;product=cell division protein FtsI;protein_id=WP_038432656.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3899825 3900562 . - . ID=gene3840;Name=SH03_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19250;old_locus_tag=SH03_19260 NZ_CP010441.1 Protein Homology CDS 3899825 3900562 . - 0 ID=cds3743;Parent=gene3840;Dbxref=Genbank:WP_000965722.1;Name=WP_000965722.1;Note=catalyzes the formation of 1%2C2-diacyl-sn-glycerol 3-phosphate from 1-acyl-sn-glycerol 3-phosphate using either acyl-CoA or acyl-ACP;gbkey=CDS;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=WP_000965722.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3900796 3903054 . - . ID=gene3841;Name=SH03_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19255;old_locus_tag=SH03_19265 NZ_CP010441.1 Protein Homology CDS 3900796 3903054 . - 0 ID=cds3744;Parent=gene3841;Dbxref=Genbank:WP_001281881.1;Name=WP_001281881.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;product=DNA topoisomerase 4 subunit A;protein_id=WP_001281881.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3903192 3904799 . - . ID=gene3842;Name=SH03_RS19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19260;old_locus_tag=SH03_19270 NZ_CP010441.1 Protein Homology CDS 3903192 3904799 . - 0 ID=cds3745;Parent=gene3842;Dbxref=Genbank:WP_001295629.1;Name=WP_001295629.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_001295629.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3904932 3905327 . - . ID=gene3843;Name=SH03_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19265;old_locus_tag=SH03_19275 NZ_CP010441.1 Protein Homology CDS 3904932 3905327 . - 0 ID=cds3746;Parent=gene3843;Dbxref=Genbank:WP_000650107.1;Name=WP_000650107.1;gbkey=CDS;product=antitoxin;protein_id=WP_000650107.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3905329 3905625 . - . ID=gene3844;Name=SH03_RS19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19270;old_locus_tag=SH03_19280 NZ_CP010441.1 Protein Homology CDS 3905329 3905625 . - 0 ID=cds3747;Parent=gene3844;Dbxref=Genbank:WP_000415584.1;Name=WP_000415584.1;gbkey=CDS;product=mRNA interferase MqsR;protein_id=WP_000415584.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3905830 3906312 . - . ID=gene3845;Name=SH03_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19275;old_locus_tag=SH03_19285 NZ_CP010441.1 Protein Homology CDS 3905830 3906312 . - 0 ID=cds3748;Parent=gene3845;Dbxref=Genbank:WP_000183505.1;Name=WP_000183505.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000183505.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3906365 3906757 . - . ID=gene3846;Name=SH03_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19280;old_locus_tag=SH03_19290 NZ_CP010441.1 Protein Homology CDS 3906365 3906757 . - 0 ID=cds3749;Parent=gene3846;Dbxref=Genbank:WP_000712658.1;Name=WP_000712658.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000712658.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3906909 3907568 . + . ID=gene3847;Name=SH03_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19285;old_locus_tag=SH03_19295 NZ_CP010441.1 Protein Homology CDS 3906909 3907568 . + 0 ID=cds3750;Parent=gene3847;Dbxref=Genbank:WP_001221495.1;Name=WP_001221495.1;Note=response regulator in two-component regulatory system with QseC%3B regulates FlhCD which is the master regulator for flagella and motility genes;gbkey=CDS;product=two-component system response regulator;protein_id=WP_001221495.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3907565 3908914 . + . ID=gene3848;Name=SH03_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19290;old_locus_tag=SH03_19300 NZ_CP010441.1 Protein Homology CDS 3907565 3908914 . + 0 ID=cds3751;Parent=gene3848;Dbxref=Genbank:WP_000673402.1;Name=WP_000673402.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_000673402.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3908960 3909292 . - . ID=gene3849;Name=SH03_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19295;old_locus_tag=SH03_19305 NZ_CP010441.1 Protein Homology CDS 3908960 3909292 . - 0 ID=cds3752;Parent=gene3849;Dbxref=Genbank:WP_000917684.1;Name=WP_000917684.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000917684.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3909611 3910192 . + . ID=gene3850;Name=SH03_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19300;old_locus_tag=SH03_19310 NZ_CP010441.1 Protein Homology CDS 3909611 3910192 . + 0 ID=cds3753;Parent=gene3850;Dbxref=Genbank:WP_000065430.1;Name=WP_000065430.1;Note=involved in drug resistance;gbkey=CDS;product=modulator of drug activity B;protein_id=WP_000065430.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3910223 3910537 . + . ID=gene3851;Name=SH03_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19305;old_locus_tag=SH03_19315 NZ_CP010441.1 Protein Homology CDS 3910223 3910537 . + 0 ID=cds3754;Parent=gene3851;Dbxref=Genbank:WP_000958598.1;Name=WP_000958598.1;Note=catalyzes the oxidation of menadiol to menadione;gbkey=CDS;product=quinol monooxygenase YgiN;protein_id=WP_000958598.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3910585 3912477 . - . ID=gene3852;Name=SH03_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19310;old_locus_tag=SH03_19320 NZ_CP010441.1 Protein Homology CDS 3910585 3912477 . - 0 ID=cds3755;Parent=gene3852;Dbxref=Genbank:WP_000195296.1;Name=WP_000195296.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;product=DNA topoisomerase 4 subunit B;protein_id=WP_000195296.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3912506 3913087 . - . ID=gene3853;Name=SH03_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19315;old_locus_tag=SH03_19325 NZ_CP010441.1 Protein Homology CDS 3912506 3913087 . - 0 ID=cds3756;Parent=gene3853;Dbxref=Genbank:WP_000105733.1;Name=WP_000105733.1;Note=Displays esterase activity toward palmitoyl-CoA and pNP-butyrate;gbkey=CDS;product=esterase;protein_id=WP_000105733.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3913087 3913914 . - . ID=gene3854;Name=SH03_RS19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19320;old_locus_tag=SH03_19330 NZ_CP010441.1 Protein Homology CDS 3913087 3913914 . - 0 ID=cds3757;Parent=gene3854;Dbxref=Genbank:WP_000444747.1;Name=WP_000444747.1;gbkey=CDS;product=3'%2C5'-cyclic adenosine monophosphate phosphodiesterase CpdA;protein_id=WP_000444747.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3913939 3914361 . - . ID=gene3855;Name=SH03_RS19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19325;old_locus_tag=SH03_19335 NZ_CP010441.1 Protein Homology CDS 3913939 3914361 . - 0 ID=cds3758;Parent=gene3855;Dbxref=Genbank:WP_000833393.1;Name=WP_000833393.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_000833393.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3914362 3914991 . - . ID=gene3856;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=SH03_RS19330;old_locus_tag=SH03_19340 NZ_CP010441.1 Protein Homology CDS 3914362 3914991 . - 0 ID=cds3759;Parent=gene3856;Dbxref=Genbank:WP_000917117.1;Name=WP_000917117.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudF;product=ADP-ribose pyrophosphatase;protein_id=WP_000917117.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3915196 3916677 . + . ID=gene3857;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=SH03_RS19335;old_locus_tag=SH03_19345 NZ_CP010441.1 Protein Homology CDS 3915196 3916677 . + 0 ID=cds3760;Parent=gene3857;Dbxref=Genbank:WP_000735278.1;Name=WP_000735278.1;Note=trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules%3B functions with a number of efflux systems in the inner membrane to transport molecules out of the cell;gbkey=CDS;gene=tolC;product=outer membrane protein TolC;protein_id=WP_000735278.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3916677 3916937 . + . ID=gene3858;Name=SH03_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19340;old_locus_tag=SH03_19350 NZ_CP010441.1 Protein Homology CDS 3916677 3916937 . + 0 ID=cds3761;Parent=gene3858;Dbxref=Genbank:WP_001701108.1;Name=WP_001701108.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001701108.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3916825 3917496 . + . ID=gene3859;Name=SH03_RS19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19345;old_locus_tag=SH03_19355 NZ_CP010441.1 Protein Homology CDS 3916825 3917496 . + 0 ID=cds3762;Parent=gene3859;Dbxref=Genbank:WP_000831543.1;Name=WP_000831543.1;gbkey=CDS;product=membrane protein;protein_id=WP_000831543.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3917502 3918662 . + . ID=gene3860;Name=SH03_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19350;old_locus_tag=SH03_19360 NZ_CP010441.1 Protein Homology CDS 3917502 3918662 . + 0 ID=cds3763;Parent=gene3860;Dbxref=Genbank:WP_000442860.1;Name=WP_000442860.1;gbkey=CDS;product=ATP-Grasp family ATPase;protein_id=WP_000442860.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3918700 3919488 . - . ID=gene3861;Name=SH03_RS19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19355;old_locus_tag=SH03_19365 NZ_CP010441.1 Protein Homology CDS 3918700 3919488 . - 0 ID=cds3764;Parent=gene3861;Dbxref=Genbank:WP_001320780.1;Name=WP_001320780.1;Note=seems to be involved in biofilm formation%3B in asymptomatic bacteriuria E. coli strains 83972 and VR50%2C the ygiD gene is upregulated during biofilm formation in urine;gbkey=CDS;product=4%2C5- DOPA-extradiol-dioxygenase;protein_id=WP_001320780.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3919631 3920404 . + . ID=gene3862;Name=SH03_RS19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19360;old_locus_tag=SH03_19370 NZ_CP010441.1 Protein Homology CDS 3919631 3920404 . + 0 ID=cds3765;Parent=gene3862;Dbxref=Genbank:WP_001295627.1;Name=WP_001295627.1;gbkey=CDS;product=zinc transporter ZupT;protein_id=WP_001295627.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3920462 3920632 . - . ID=gene3863;Name=SH03_RS19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19365;old_locus_tag=SH03_19375 NZ_CP010441.1 Protein Homology CDS 3920462 3920632 . - 0 ID=cds3766;Parent=gene3863;Dbxref=Genbank:WP_000469266.1;Name=WP_000469266.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000469266.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3920894 3921547 . - . ID=gene3864;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=SH03_RS19370;old_locus_tag=SH03_19380 NZ_CP010441.1 Protein Homology CDS 3920894 3921547 . - 0 ID=cds3767;Parent=gene3864;Dbxref=Genbank:WP_001076997.1;Name=WP_001076997.1;Note=DHBP synthase%3B functions during riboflavin biosynthesis;gbkey=CDS;gene=ribB;product=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;protein_id=WP_001076997.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3921921 3922211 . + . ID=gene3865;Name=SH03_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19375;old_locus_tag=SH03_19385 NZ_CP010441.1 Protein Homology CDS 3921921 3922211 . + 0 ID=cds3768;Parent=gene3865;Dbxref=Genbank:WP_001295626.1;Name=WP_001295626.1;gbkey=CDS;product=BMFP family fusogenic protein;protein_id=WP_001295626.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3922495 3923046 . + . ID=gene3866;Name=SH03_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19380;old_locus_tag=SH03_19390 NZ_CP010441.1 Protein Homology CDS 3922495 3923046 . + 0 ID=cds3769;Parent=gene3866;Dbxref=Genbank:WP_001272145.1;Name=WP_001272145.1;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=WP_001272145.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 3923176 3924508 . + . ID=id205;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 3923268 3923633 . + . ID=gene3867;Name=SH03_RS19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19385;old_locus_tag=SH03_19395 NZ_CP010441.1 Protein Homology CDS 3923268 3923633 . + 0 ID=cds3770;Parent=gene3867;Dbxref=Genbank:WP_000567766.1;Name=WP_000567766.1;Note=represses IS2 gene transcription;gbkey=CDS;product=transposase;protein_id=WP_000567766.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3923591 3924496 . + . ID=gene3868;Name=SH03_RS19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19390;old_locus_tag=SH03_19400 NZ_CP010441.1 Protein Homology CDS 3923591 3924496 . + 0 ID=cds3771;Parent=gene3868;Dbxref=Genbank:WP_000376502.1;Name=WP_000376502.1;gbkey=CDS;product=integrase;protein_id=WP_000376502.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3924481 3926946 . + . ID=gene3869;Name=SH03_RS19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19395;old_locus_tag=SH03_19405 NZ_CP010441.1 Protein Homology CDS 3924481 3926946 . + 0 ID=cds3772;Parent=gene3869;Dbxref=Genbank:WP_000016375.1;Name=WP_000016375.1;gbkey=CDS;product=fimbrial outer membrane usher protein StdB;protein_id=WP_000016375.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3926962 3927711 . + . ID=gene3870;Name=SH03_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19400;old_locus_tag=SH03_19410 NZ_CP010441.1 Protein Homology CDS 3926962 3927711 . + 0 ID=cds3773;Parent=gene3870;Dbxref=Genbank:WP_001269824.1;Name=WP_001269824.1;gbkey=CDS;product=periplasmic pilin chaperone;protein_id=WP_001269824.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3927713 3928777 . + . ID=gene3871;Name=SH03_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19405;old_locus_tag=SH03_19415 NZ_CP010441.1 Protein Homology CDS 3927713 3928777 . + 0 ID=cds3774;Parent=gene3871;Dbxref=Genbank:WP_001269802.1;Name=WP_001269802.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_001269802.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3928820 3929020 . - . ID=gene3872;Name=SH03_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19410;old_locus_tag=SH03_19420 NZ_CP010441.1 Protein Homology CDS 3928820 3929020 . - 0 ID=cds3775;Parent=gene3872;Dbxref=Genbank:WP_000350095.1;Name=WP_000350095.1;Note=Involved in glycogen synthesis. May be involved in glycogen priming;gbkey=CDS;product=glycogen synthase;protein_id=WP_000350095.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3929289 3929918 . + . ID=gene3873;Name=SH03_RS19415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19415;old_locus_tag=SH03_19425 NZ_CP010441.1 Protein Homology CDS 3929289 3929918 . + 0 ID=cds3776;Parent=gene3873;Dbxref=Genbank:WP_000599926.1;Name=WP_000599926.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000599926.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3929945 3931606 . + . ID=gene3874;Name=SH03_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19420;old_locus_tag=SH03_19430 NZ_CP010441.1 Protein Homology CDS 3929945 3931606 . + 0 ID=cds3777;Parent=gene3874;Dbxref=Genbank:WP_001311137.1;Name=WP_001311137.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001311137.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3931707 3931959 . + . ID=gene3875;Name=SH03_RS19425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS19425;pseudo=true NZ_CP010441.1 Protein Homology CDS 3931707 3931959 . + 0 ID=cds3778;Parent=gene3875;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 3931943 3932334 . + . ID=gene3876;Name=SH03_RS19430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS19430;pseudo=true NZ_CP010441.1 Protein Homology CDS 3931943 3932334 . + 0 ID=cds3779;Parent=gene3876;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:3932209..3932211%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq gene 3932401 3933834 . - . ID=gene3877;Name=SH03_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19435;old_locus_tag=SH03_19445 NZ_CP010441.1 Protein Homology CDS 3932401 3933834 . - 0 ID=cds3780;Parent=gene3877;Dbxref=Genbank:WP_000869178.1;Name=WP_000869178.1;Note=catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose;gbkey=CDS;product=bifunctional protein HldE;protein_id=WP_000869178.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3933882 3936722 . - . ID=gene3878;Name=SH03_RS19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19440;old_locus_tag=SH03_19450 NZ_CP010441.1 Protein Homology CDS 3933882 3936722 . - 0 ID=cds3781;Parent=gene3878;Dbxref=Genbank:WP_001301081.1;Name=WP_001301081.1;Note=catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme;gbkey=CDS;product=glutamate--ammonia-ligase adenylyltransferase;protein_id=WP_001301081.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3936745 3938046 . - . ID=gene3879;Name=SH03_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19445;old_locus_tag=SH03_19455 NZ_CP010441.1 Protein Homology CDS 3936745 3938046 . - 0 ID=cds3782;Parent=gene3879;Dbxref=Genbank:WP_000046281.1;Name=WP_000046281.1;gbkey=CDS;product=inorganic triphosphatase;protein_id=WP_000046281.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3938063 3938248 . - . ID=gene3880;Name=SH03_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19450;old_locus_tag=SH03_19460 NZ_CP010441.1 Protein Homology CDS 3938063 3938248 . - 0 ID=cds3783;Parent=gene3880;Dbxref=Genbank:WP_001298386.1;Name=WP_001298386.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001298386.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3938288 3938908 . + . ID=gene3881;Name=SH03_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19455;old_locus_tag=SH03_19465 NZ_CP010441.1 Protein Homology CDS 3938288 3938908 . + 0 ID=cds3784;Parent=gene3881;Dbxref=Genbank:WP_001125331.1;Name=WP_001125331.1;gbkey=CDS;product=signal transduction protein;protein_id=WP_001125331.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3938972 3940210 . + . ID=gene3882;Name=SH03_RS19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19460;old_locus_tag=SH03_19470 NZ_CP010441.1 Protein Homology CDS 3938972 3940210 . + 0 ID=cds3785;Parent=gene3882;Dbxref=Genbank:WP_000708487.1;Name=WP_000708487.1;gbkey=CDS;product=multifunctional CCA protein;protein_id=WP_000708487.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3940391 3941212 . - . ID=gene3883;Name=SH03_RS19465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19465;old_locus_tag=SH03_19475 NZ_CP010441.1 Protein Homology CDS 3940391 3941212 . - 0 ID=cds3786;Parent=gene3883;Dbxref=Genbank:WP_001281927.1;Name=WP_001281927.1;Note=BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell;gbkey=CDS;product=undecaprenyl-diphosphatase;protein_id=WP_001281927.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3941302 3941670 . - . ID=gene3884;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=SH03_RS19470;old_locus_tag=SH03_19480 NZ_CP010441.1 Protein Homology CDS 3941302 3941670 . - 0 ID=cds3787;Parent=gene3884;Dbxref=Genbank:WP_001295541.1;Name=WP_001295541.1;Note=catalyzes the conversion of 7%2C8-dihydroneopterin to 6-hydroxymethyl-7%2C8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin;gbkey=CDS;gene=folB;product=dihydroneopterin aldolase;protein_id=WP_001295541.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3941775 3942392 . + . ID=gene3885;Name=SH03_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19475;old_locus_tag=SH03_19485 NZ_CP010441.1 Protein Homology CDS 3941775 3942392 . + 0 ID=cds3788;Parent=gene3885;Dbxref=Genbank:WP_001272796.1;Name=WP_001272796.1;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX;gbkey=CDS;product=glycerol-3-phosphate acyltransferase;protein_id=WP_001272796.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3942405 3943337 . - . ID=gene3886;Name=SH03_RS19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19480;old_locus_tag=SH03_19490 NZ_CP010441.1 Protein Homology CDS 3942405 3943337 . - 0 ID=cds3789;Parent=gene3886;Dbxref=Genbank:WP_000935206.1;Name=WP_000935206.1;gbkey=CDS;product=transcriptional activator TtdR;protein_id=WP_000935206.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3943547 3944455 . + . ID=gene3887;Name=SH03_RS19485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19485;old_locus_tag=SH03_19495 NZ_CP010441.1 Protein Homology CDS 3943547 3944455 . + 0 ID=cds3790;Parent=gene3887;Dbxref=Genbank:WP_001380071.1;Name=WP_001380071.1;Note=Involved in the tartrate degradation pathway;gbkey=CDS;product=tartrate dehydratase subunit alpha;protein_id=WP_001380071.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3944452 3945056 . + . ID=gene3888;Name=SH03_RS19490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS19490;pseudo=true NZ_CP010441.1 Protein Homology CDS 3944452 3945056 . + 0 ID=cds3791;Parent=gene3888;Note=Involved in the tartrate degradation pathway;exception=annotated by transcript or proteomic data;gbkey=CDS;product=tartrate dehydratase subunit beta;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 3945104 3946567 . + . ID=gene3889;Name=SH03_RS19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19495;old_locus_tag=SH03_19505 NZ_CP010441.1 Protein Homology CDS 3945104 3946567 . + 0 ID=cds3792;Parent=gene3889;Dbxref=Genbank:WP_000804973.1;Name=WP_000804973.1;Note=involved in the transport of citrate into the cell along with the export of succinate out of the cell;gbkey=CDS;product=L-tartrate/succinate antiporter;protein_id=WP_000804973.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3946610 3947623 . - . ID=gene3890;Name=SH03_RS19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19500;old_locus_tag=SH03_19510 NZ_CP010441.1 Protein Homology CDS 3946610 3947623 . - 0 ID=cds3793;Parent=gene3890;Dbxref=Genbank:WP_001264352.1;Name=WP_001264352.1;Note=universal genome maintenance protein%3B Kae1/Qri7/OSGEP/YgjD family protein%3B in Archaea%2C some Kae1 are found as fusion proteins similar to two distinct proteins in yeast that are involved in the KEOPS complex%3B kinase associated endopeptidase 1 (Kae1) and a serine/threonine protein kinase (Bud32)%3B in Pyrococcus Kae1 has atypical AP endonuclease activity and inhibits the kinase activity of Bud32%3B the protein is essential in Escherichia coli and Bacillus subtilis;gbkey=CDS;product=tRNA N6-adenosine threonylcarbamoyltransferase;protein_id=WP_001264352.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3947861 3948076 . + . ID=gene3891;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=SH03_RS19505;old_locus_tag=SH03_19515 NZ_CP010441.1 Protein Homology CDS 3947861 3948076 . + 0 ID=cds3794;Parent=gene3891;Dbxref=Genbank:WP_001144069.1;Name=WP_001144069.1;Note=a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA;gbkey=CDS;gene=rpsU;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3948187 3949932 . + . ID=gene3892;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=SH03_RS19510;old_locus_tag=SH03_19520 NZ_CP010441.1 Protein Homology CDS 3948187 3949932 . + 0 ID=cds3795;Parent=gene3892;Dbxref=Genbank:WP_000918827.1;Name=WP_000918827.1;Note=synthesizes RNA primers at the replication forks;gbkey=CDS;gene=dnaG;product=DNA primase;protein_id=WP_000918827.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3950127 3951968 . + . ID=gene3893;Name=SH03_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19515;old_locus_tag=SH03_19525 NZ_CP010441.1 Protein Homology CDS 3950127 3951968 . + 0 ID=cds3796;Parent=gene3893;Dbxref=Genbank:WP_000437376.1;Name=WP_000437376.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria;gbkey=CDS;product=RNA polymerase sigma factor RpoD;protein_id=WP_000437376.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3952047 3952553 . - . ID=gene3894;Name=SH03_RS19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19520;old_locus_tag=SH03_19530 NZ_CP010441.1 Protein Homology CDS 3952047 3952553 . - 0 ID=cds3797;Parent=gene3894;Dbxref=Genbank:WP_000228937.1;Name=WP_000228937.1;gbkey=CDS;product=G/U mismatch DNA glycosylase;protein_id=WP_000228937.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3952678 3952753 . + . ID=gene3895;Name=SH03_RS19525;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS19525;old_locus_tag=SH03_19535 NZ_CP010441.1 tRNAscan-SE tRNA 3952678 3952753 . + . ID=rna97;Parent=gene3895;anticodon=(pos:3952711..3952713);gbkey=tRNA;product=tRNA-Met NZ_CP010441.1 tRNAscan-SE exon 3952678 3952753 . + . ID=id206;Parent=rna97;anticodon=(pos:3952711..3952713);gbkey=tRNA;product=tRNA-Met NZ_CP010441.1 RefSeq gene 3952807 3953571 . - . ID=gene3896;Name=SH03_RS19530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19530;old_locus_tag=SH03_19540 NZ_CP010441.1 Protein Homology CDS 3952807 3953571 . - 0 ID=cds3798;Parent=gene3896;Dbxref=Genbank:WP_001066494.1;Name=WP_001066494.1;gbkey=CDS;product=NADPH-dependent ferric-chelate reductase;protein_id=WP_001066494.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3953859 3954482 . + . ID=gene3897;Name=SH03_RS19535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19535;old_locus_tag=SH03_19545 NZ_CP010441.1 Protein Homology CDS 3953859 3954482 . + 0 ID=cds3799;Parent=gene3897;Dbxref=Genbank:WP_000018003.1;Name=WP_000018003.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000018003.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3954636 3956156 . - . ID=gene3898;Name=SH03_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19540;old_locus_tag=SH03_19550 NZ_CP010441.1 Protein Homology CDS 3954636 3956156 . - 0 ID=cds3800;Parent=gene3898;Dbxref=Genbank:WP_000094721.1;Name=WP_000094721.1;gbkey=CDS;product=aerotaxis receptor;protein_id=WP_000094721.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3956574 3957953 . + . ID=gene3899;Name=SH03_RS19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19545;old_locus_tag=SH03_19555 NZ_CP010441.1 Protein Homology CDS 3956574 3957953 . + 0 ID=cds3801;Parent=gene3899;Dbxref=Genbank:WP_001301395.1;Name=WP_001301395.1;Note=catalyzes the formation of 4-aminobutyraldehyde from putrescine and 2-oxoglutarate;gbkey=CDS;product=putrescine aminotransferase;protein_id=WP_001301395.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3957995 3958327 . - . ID=gene3900;Name=SH03_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19550;old_locus_tag=SH03_19560 NZ_CP010441.1 Protein Homology CDS 3957995 3958327 . - 0 ID=cds3802;Parent=gene3900;Dbxref=Genbank:WP_000450594.1;Name=WP_000450594.1;gbkey=CDS;product=tRNA-binding protein;protein_id=WP_000450594.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3958546 3959529 . + . ID=gene3901;Name=SH03_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19555;old_locus_tag=SH03_19565 NZ_CP010441.1 Protein Homology CDS 3958546 3959529 . + 0 ID=cds3803;Parent=gene3901;Dbxref=Genbank:WP_000212475.1;Name=WP_000212475.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000212475.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3959713 3962805 . + . ID=gene3902;Name=ebgA;gbkey=Gene;gene=ebgA;gene_biotype=protein_coding;locus_tag=SH03_RS19560;old_locus_tag=SH03_19570 NZ_CP010441.1 Protein Homology CDS 3959713 3962805 . + 0 ID=cds3804;Parent=gene3902;Dbxref=Genbank:WP_001082856.1;Name=WP_001082856.1;Note=in Escherichia coli this is the second beta-galactosidase system;gbkey=CDS;gene=ebgA;product=evolved beta-galactosidase subunit alpha;protein_id=WP_001082856.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3962802 3963251 . + . ID=gene3903;Name=ebgC;gbkey=Gene;gene=ebgC;gene_biotype=protein_coding;locus_tag=SH03_RS19565;old_locus_tag=SH03_19575 NZ_CP010441.1 Protein Homology CDS 3962802 3963251 . + 0 ID=cds3805;Parent=gene3903;Dbxref=Genbank:WP_001219954.1;Name=WP_001219954.1;Note=in Escherichia coli this is the second beta-galactosidase system;gbkey=CDS;gene=ebgC;product=evolved beta-galactosidase subunit beta;protein_id=WP_001219954.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3963314 3964747 . + . ID=gene3904;Name=SH03_RS19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19570;old_locus_tag=SH03_19580 NZ_CP010441.1 Protein Homology CDS 3963314 3964747 . + 0 ID=cds3806;Parent=gene3904;Dbxref=Genbank:WP_001285432.1;Name=WP_001285432.1;gbkey=CDS;product=inner membrane transporter YgjI;protein_id=WP_001285432.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3964881 3965951 . + . ID=gene3905;Name=SH03_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19575;old_locus_tag=SH03_19585 NZ_CP010441.1 Protein Homology CDS 3964881 3965951 . + 0 ID=cds3807;Parent=gene3905;Dbxref=Genbank:WP_000767652.1;Name=WP_000767652.1;gbkey=CDS;product=periplasmic protein;protein_id=WP_000767652.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3965968 3968319 . + . ID=gene3906;Name=SH03_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19580;old_locus_tag=SH03_19590 NZ_CP010441.1 Protein Homology CDS 3965968 3968319 . + 0 ID=cds3808;Parent=gene3906;Dbxref=Genbank:WP_000695487.1;Name=WP_000695487.1;gbkey=CDS;product=glucosidase YgjK;protein_id=WP_000695487.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3968745 3970763 . + . ID=gene3907;Name=SH03_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19585;old_locus_tag=SH03_19595 NZ_CP010441.1 Protein Homology CDS 3968745 3970763 . + 0 ID=cds3809;Parent=gene3907;Dbxref=Genbank:WP_000121433.1;Name=WP_000121433.1;gbkey=CDS;product=2%2C4-dienoyl-CoA reductase [NADPH];protein_id=WP_000121433.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3970808 3971224 . - . ID=gene3908;Name=SH03_RS19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19590;old_locus_tag=SH03_19600 NZ_CP010441.1 Protein Homology CDS 3970808 3971224 . - 0 ID=cds3810;Parent=gene3908;Dbxref=Genbank:WP_000560266.1;Name=WP_000560266.1;gbkey=CDS;product=antitoxin HigA;protein_id=WP_000560266.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3971221 3971535 . - . ID=gene3909;Name=SH03_RS19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19595;old_locus_tag=SH03_19605 NZ_CP010441.1 Protein Homology CDS 3971221 3971535 . - 0 ID=cds3811;Parent=gene3909;Dbxref=Genbank:WP_000550189.1;Name=WP_000550189.1;gbkey=CDS;product=mRNA interferase HigB;protein_id=WP_000550189.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3971477 3971716 . - . ID=gene3910;Name=SH03_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19600;old_locus_tag=SH03_19610 NZ_CP010441.1 Protein Homology CDS 3971477 3971716 . - 0 ID=cds3812;Parent=gene3910;Dbxref=Genbank:WP_001326617.1;Name=WP_001326617.1;gbkey=CDS;product=toxin RelE;protein_id=WP_001326617.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3971819 3972955 . - . ID=gene3911;Name=SH03_RS19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19605;old_locus_tag=SH03_19615 NZ_CP010441.1 Protein Homology CDS 3971819 3972955 . - 0 ID=cds3813;Parent=gene3911;Dbxref=Genbank:WP_000018695.1;Name=WP_000018695.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase G;protein_id=WP_000018695.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3973040 3973543 . + . ID=gene3912;Name=SH03_RS19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19610;old_locus_tag=SH03_19620 NZ_CP010441.1 Protein Homology CDS 3973040 3973543 . + 0 ID=cds3814;Parent=gene3912;Dbxref=Genbank:WP_001333820.1;Name=WP_001333820.1;gbkey=CDS;product=metal dependent hydrolase;protein_id=WP_001333820.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3973620 3974312 . + . ID=gene3913;Name=SH03_RS19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19615;old_locus_tag=SH03_19625 NZ_CP010441.1 Protein Homology CDS 3973620 3974312 . + 0 ID=cds3815;Parent=gene3913;Dbxref=Genbank:WP_000942548.1;Name=WP_000942548.1;gbkey=CDS;product=DUF218 domain-containing protein;protein_id=WP_000942548.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3974391 3975377 . + . ID=gene3914;Name=SH03_RS19620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19620;old_locus_tag=SH03_19630 NZ_CP010441.1 Protein Homology CDS 3974391 3975377 . + 0 ID=cds3816;Parent=gene3914;Dbxref=Genbank:WP_000617698.1;Name=WP_000617698.1;gbkey=CDS;product=NAD(P)-dependent dehydrogenase;protein_id=WP_000617698.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3975660 3976625 . + . ID=gene3915;Name=SH03_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19625;old_locus_tag=SH03_19635 NZ_CP010441.1 Protein Homology CDS 3975660 3976625 . + 0 ID=cds3817;Parent=gene3915;Dbxref=Genbank:WP_001098806.1;Name=WP_001098806.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001098806.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3977024 3978268 . + . ID=gene3916;Name=SH03_RS19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19630;old_locus_tag=SH03_19640 NZ_CP010441.1 Protein Homology CDS 3977024 3978268 . + 0 ID=cds3818;Parent=gene3916;Dbxref=Genbank:WP_000211655.1;Name=WP_000211655.1;Note=involved in the import of serine and threonine coupled with the import of sodium;gbkey=CDS;product=serine/threonine transporter SstT;protein_id=WP_000211655.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3978273 3978824 . - . ID=gene3917;Name=SH03_RS19635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19635;old_locus_tag=SH03_19645 NZ_CP010441.1 Protein Homology CDS 3978273 3978824 . - 0 ID=cds3819;Parent=gene3917;Dbxref=Genbank:WP_000128135.1;Name=WP_000128135.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000128135.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3978907 3980394 . - . ID=gene3918;Name=SH03_RS19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19640;old_locus_tag=SH03_19650 NZ_CP010441.1 Protein Homology CDS 3978907 3980394 . - 0 ID=cds3820;Parent=gene3918;Dbxref=Genbank:WP_001199390.1;Name=WP_001199390.1;gbkey=CDS;product=altronate dehydratase;protein_id=WP_001199390.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3980409 3981821 . - . ID=gene3919;Name=SH03_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19645;old_locus_tag=SH03_19655 NZ_CP010441.1 Protein Homology CDS 3980409 3981821 . - 0 ID=cds3821;Parent=gene3919;Dbxref=Genbank:WP_000187442.1;Name=WP_000187442.1;Note=catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate%3B functions in glucuronic and galacturonic metabolism;gbkey=CDS;product=uronate isomerase;protein_id=WP_000187442.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3982304 3983602 . + . ID=gene3920;Name=SH03_RS19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19650;old_locus_tag=SH03_19660 NZ_CP010441.1 Protein Homology CDS 3982304 3983602 . + 0 ID=cds3822;Parent=gene3920;Dbxref=Genbank:WP_001226465.1;Name=WP_001226465.1;Note=involved in the transport of aldohexuronates;gbkey=CDS;product=hexuronate transporter;protein_id=WP_001226465.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3983732 3984508 . + . ID=gene3921;Name=SH03_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19655;old_locus_tag=SH03_19665 NZ_CP010441.1 Protein Homology CDS 3983732 3984508 . + 0 ID=cds3823;Parent=gene3921;Dbxref=Genbank:WP_000406488.1;Name=WP_000406488.1;Note=regulates the expression of uxuBA;gbkey=CDS;product=exu regulon transcriptional regulator;protein_id=WP_000406488.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3984853 3985515 . + . ID=gene3922;Name=SH03_RS19660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19660;old_locus_tag=SH03_19670 NZ_CP010441.1 Protein Homology CDS 3984853 3985515 . + 0 ID=cds3824;Parent=gene3922;Dbxref=Genbank:WP_000422149.1;Name=WP_000422149.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000422149.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3985519 3985902 . + . ID=gene3923;Name=SH03_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19665;old_locus_tag=SH03_19675 NZ_CP010441.1 Protein Homology CDS 3985519 3985902 . + 0 ID=cds3825;Parent=gene3923;Dbxref=Genbank:WP_001166760.1;Name=WP_001166760.1;gbkey=CDS;product=modulator protein MzrA;protein_id=WP_001166760.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3986049 3986417 . + . ID=gene3924;Name=SH03_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19670;old_locus_tag=SH03_19680 NZ_CP010441.1 Protein Homology CDS 3986049 3986417 . + 0 ID=cds3826;Parent=gene3924;Dbxref=Genbank:WP_001295543.1;Name=WP_001295543.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001295543.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3986455 3986760 . + . ID=gene3925;Name=SH03_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19675;old_locus_tag=SH03_19685 NZ_CP010441.1 Protein Homology CDS 3986455 3986760 . + 0 ID=cds3827;Parent=gene3925;Dbxref=Genbank:WP_000031415.1;Name=WP_000031415.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000031415.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3986763 3987167 . + . ID=gene3926;Name=SH03_RS19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19680;old_locus_tag=SH03_19690 NZ_CP010441.1 Protein Homology CDS 3986763 3987167 . + 0 ID=cds3828;Parent=gene3926;Dbxref=Genbank:WP_000785722.1;Name=WP_000785722.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000785722.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3987157 3987456 . + . ID=gene3927;Name=SH03_RS19685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19685;old_locus_tag=SH03_19695 NZ_CP010441.1 Protein Homology CDS 3987157 3987456 . + 0 ID=cds3829;Parent=gene3927;Dbxref=Genbank:WP_000096091.1;Name=WP_000096091.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000096091.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3987642 3988034 . + . ID=gene3928;Name=SH03_RS19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19690;old_locus_tag=SH03_19700 NZ_CP010441.1 Protein Homology CDS 3987642 3988034 . + 0 ID=cds3830;Parent=gene3928;Dbxref=Genbank:WP_000732240.1;Name=WP_000732240.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000732240.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3988104 3989090 . + . ID=gene3929;Name=SH03_RS19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19695;old_locus_tag=SH03_19705 NZ_CP010441.1 Protein Homology CDS 3988104 3989090 . + 0 ID=cds3831;Parent=gene3929;Dbxref=Genbank:WP_000531213.1;Name=WP_000531213.1;gbkey=CDS;product=glutathionyl-hydroquinone reductase YqjG;protein_id=WP_000531213.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3989384 3989749 . + . ID=gene3930;Name=SH03_RS19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19700;old_locus_tag=SH03_19710 NZ_CP010441.1 Protein Homology CDS 3989384 3989749 . + 0 ID=cds3832;Parent=gene3930;Dbxref=Genbank:WP_000384145.1;Name=WP_000384145.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000384145.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3989991 3990347 . + . ID=gene3931;Name=SH03_RS19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19705;old_locus_tag=SH03_19715 NZ_CP010441.1 Protein Homology CDS 3989991 3990347 . + 0 ID=cds3833;Parent=gene3931;Dbxref=Genbank:WP_001198807.1;Name=WP_001198807.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001198807.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3990398 3991294 . - . ID=gene3932;Name=SH03_RS19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19710;old_locus_tag=SH03_19720 NZ_CP010441.1 Protein Homology CDS 3990398 3991294 . - 0 ID=cds3834;Parent=gene3932;Dbxref=Genbank:WP_001041009.1;Name=WP_001041009.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_001041009.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3991399 3992100 . + . ID=gene3933;Name=SH03_RS19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19715;old_locus_tag=SH03_19725 NZ_CP010441.1 Protein Homology CDS 3991399 3992100 . + 0 ID=cds3835;Parent=gene3933;Dbxref=Genbank:WP_000633576.1;Name=WP_000633576.1;gbkey=CDS;product=pirin-like protein YhaK;protein_id=WP_000633576.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3992120 3992287 . + . ID=gene3934;Name=SH03_RS19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19720;old_locus_tag=SH03_19730 NZ_CP010441.1 Protein Homology CDS 3992120 3992287 . + 0 ID=cds3836;Parent=gene3934;Dbxref=Genbank:WP_000987175.1;Name=WP_000987175.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000987175.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3992421 3993731 . - . ID=gene3935;Name=SH03_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19725;old_locus_tag=SH03_19735 NZ_CP010441.1 Protein Homology CDS 3992421 3993731 . - 0 ID=cds3837;Parent=gene3935;Dbxref=Genbank:WP_000460499.1;Name=WP_000460499.1;gbkey=CDS;product=L-serine dehydratase alpha chain;protein_id=WP_000460499.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3993759 3995090 . - . ID=gene3936;Name=SH03_RS19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19730;old_locus_tag=SH03_19740 NZ_CP010441.1 Protein Homology CDS 3993759 3995090 . - 0 ID=cds3838;Parent=gene3936;Dbxref=Genbank:WP_000401598.1;Name=WP_000401598.1;gbkey=CDS;product=transporter;protein_id=WP_000401598.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3995365 3996729 . - . ID=gene3937;Name=SH03_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19735;old_locus_tag=SH03_19745 NZ_CP010441.1 Protein Homology CDS 3995365 3996729 . - 0 ID=cds3839;Parent=gene3937;Dbxref=Genbank:WP_000622126.1;Name=WP_000622126.1;Note=catalyzes the formation of pyruvate from serine;gbkey=CDS;product=L-serine dehydratase TdcG;protein_id=WP_000622126.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3996801 3997190 . - . ID=gene3938;Name=SH03_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19740;old_locus_tag=SH03_19750 NZ_CP010441.1 Protein Homology CDS 3996801 3997190 . - 0 ID=cds3840;Parent=gene3938;Dbxref=Genbank:WP_000719990.1;Name=WP_000719990.1;Note=has endoribonuclease activity on mRNA;gbkey=CDS;product=reactive intermediate/imine deaminase;protein_id=WP_000719990.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3997204 3999498 . - . ID=gene3939;Name=SH03_RS19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19745;old_locus_tag=SH03_19755 NZ_CP010441.1 Protein Homology CDS 3997204 3999498 . - 0 ID=cds3841;Parent=gene3939;Dbxref=Genbank:WP_000861734.1;Name=WP_000861734.1;Note=formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate;gbkey=CDS;product=PFL-like enzyme TdcE;protein_id=WP_000861734.1;transl_table=11 NZ_CP010441.1 RefSeq gene 3999532 3999726 . - . ID=gene3940;Name=SH03_RS22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22885;old_locus_tag=SH03_19760 NZ_CP010441.1 Protein Homology CDS 3999532 3999726 . - 0 ID=cds3842;Parent=gene3940;Dbxref=Genbank:WP_038432660.1;Name=WP_038432660.1;gbkey=CDS;product=propionate kinase;protein_id=WP_038432660.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 3999931 4001135 . + . ID=id207;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 4000080 4001060 . - . ID=gene3941;Name=SH03_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19755;old_locus_tag=SH03_19765 NZ_CP010441.1 Protein Homology CDS 4000080 4001060 . - 0 ID=cds3843;Parent=gene3941;Dbxref=Genbank:WP_000019403.1;Name=WP_000019403.1;gbkey=CDS;product=transposase;protein_id=WP_000019403.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4001127 4001939 . - . ID=gene3942;Name=SH03_RS19760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS19760;partial=true;pseudo=true;start_range=.,4001127 NZ_CP010441.1 Protein Homology CDS 4001127 4001939 . - 0 ID=cds3844;Parent=gene3942;Note=catalyzes the formation of propanoyl phosphate from propanoate and ATP%3B TdcD also has acetate kinase activities and functions in anaerobic threonine catabolism;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=propionate kinase;pseudo=true;start_range=.,4001127;transl_table=11 NZ_CP010441.1 RefSeq gene 4001965 4003296 . - . ID=gene3943;Name=SH03_RS19765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19765;old_locus_tag=SH03_19775 NZ_CP010441.1 Protein Homology CDS 4001965 4003296 . - 0 ID=cds3845;Parent=gene3943;Dbxref=Genbank:WP_000107723.1;Name=WP_000107723.1;gbkey=CDS;product=threonine/serine transporter TdcC;protein_id=WP_000107723.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4003318 4004307 . - . ID=gene3944;Name=SH03_RS19770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19770;old_locus_tag=SH03_19780 NZ_CP010441.1 Protein Homology CDS 4003318 4004307 . - 0 ID=cds3846;Parent=gene3944;Dbxref=Genbank:WP_000548347.1;Name=WP_000548347.1;Note=catalyzes the formation of 2-oxobutanoate from L-threonine%3B catabolic;gbkey=CDS;product=L-threonine dehydratase catabolic TdcB;protein_id=WP_000548347.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4004406 4005344 . - . ID=gene3945;Name=SH03_RS19775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19775;old_locus_tag=SH03_19785 NZ_CP010441.1 Protein Homology CDS 4004406 4005344 . - 0 ID=cds3847;Parent=gene3945;Dbxref=Genbank:WP_000104211.1;Name=WP_000104211.1;Note=regulates the tdcABCDEFG operon which is involved in amino acid degradation;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000104211.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4005533 4005877 . + . ID=gene3946;Name=SH03_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19780;old_locus_tag=SH03_19790 NZ_CP010441.1 Protein Homology CDS 4005533 4005877 . + 0 ID=cds3848;Parent=gene3946;Dbxref=Genbank:WP_000145840.1;Name=WP_000145840.1;Note=participates in controlling the expression of several structural genes for the enzyme threonine dehydratase%3B TdcR activates the tdcABCDEFG operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000145840.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4006133 4006672 . + . ID=gene3947;Name=SH03_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19785;old_locus_tag=SH03_19795 NZ_CP010441.1 Protein Homology CDS 4006133 4006672 . + 0 ID=cds3849;Parent=gene3947;Dbxref=Genbank:WP_000675733.1;Name=WP_000675733.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000675733.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4006694 4007881 . + . ID=gene3948;Name=SH03_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19790;old_locus_tag=SH03_19800 NZ_CP010441.1 Protein Homology CDS 4006694 4007881 . + 0 ID=cds3850;Parent=gene3948;Dbxref=Genbank:WP_000484600.1;Name=WP_000484600.1;gbkey=CDS;product=pentapetide repeats-related protein;protein_id=WP_000484600.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 4007992 4008099 . + . ID=id208;gbkey=repeat_region NZ_CP010441.1 RefSeq repeat_region 4008161 4008517 . + . ID=id209;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 4008904 4010049 . - . ID=gene3949;Name=SH03_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19795;old_locus_tag=SH03_19805 NZ_CP010441.1 Protein Homology CDS 4008904 4010049 . - 0 ID=cds3851;Parent=gene3949;Dbxref=Genbank:WP_001300387.1;Name=WP_001300387.1;gbkey=CDS;product=glycerate 2-kinase;protein_id=WP_001300387.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4010146 4011036 . - . ID=gene3950;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=SH03_RS19800;old_locus_tag=SH03_19810 NZ_CP010441.1 Protein Homology CDS 4010146 4011036 . - 0 ID=cds3852;Parent=gene3950;Dbxref=Genbank:WP_001303675.1;Name=WP_001303675.1;Note=catalyzes the reduction of tartronate semialdehyde to glycerate;gbkey=CDS;gene=garR;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_001303675.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4011066 4011836 . - . ID=gene3951;Name=SH03_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19805;old_locus_tag=SH03_19815 NZ_CP010441.1 Protein Homology CDS 4011066 4011836 . - 0 ID=cds3853;Parent=gene3951;Dbxref=Genbank:WP_001058209.1;Name=WP_001058209.1;Note=cleaves 5-dehydro-4-deoxy-glucarate and 2-dehydro-3-deoxy-D-glucarate;gbkey=CDS;product=5-keto-4-deoxy-D-glucarate aldolase;protein_id=WP_001058209.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4011852 4013186 . - . ID=gene3952;Name=SH03_RS19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19810;old_locus_tag=SH03_19820 NZ_CP010441.1 Protein Homology CDS 4011852 4013186 . - 0 ID=cds3854;Parent=gene3952;Dbxref=Genbank:WP_000599636.1;Name=WP_000599636.1;gbkey=CDS;product=galactarate transporter;protein_id=WP_000599636.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4013561 4015132 . + . ID=gene3953;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=SH03_RS19815;old_locus_tag=SH03_19825 NZ_CP010441.1 Protein Homology CDS 4013561 4015132 . + 0 ID=cds3855;Parent=gene3953;Dbxref=Genbank:WP_001273753.1;Name=WP_001273753.1;Note=catalyzes the formation of 5-dehydro-4-deoxy-D-glucarate from D-galactarate;gbkey=CDS;gene=garD;product=D-galactarate dehydratase;protein_id=WP_001273753.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4015281 4015616 . + . ID=gene3954;Name=SH03_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19820;old_locus_tag=SH03_19830 NZ_CP010441.1 Protein Homology CDS 4015281 4015616 . + 0 ID=cds3856;Parent=gene3954;Dbxref=Genbank:WP_001307405.1;Name=WP_001307405.1;Note=SohA%3B PrlF%3B involved in protein secretion%3B when overproduced or mutated%2C it induces growth defect and increased export of a reporter protein%3B a PrlF mutation induces the activity of the Lon protease%2C and a Lon-deficient strain suppresses the phenotype conferred by the PrlF mutation;gbkey=CDS;product=antitoxin PrlF;protein_id=WP_001307405.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4015616 4016080 . + . ID=gene3955;Name=SH03_RS19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19825;old_locus_tag=SH03_19835 NZ_CP010441.1 Protein Homology CDS 4015616 4016080 . + 0 ID=cds3857;Parent=gene3955;Dbxref=Genbank:WP_000347273.1;Name=WP_000347273.1;gbkey=CDS;product=toxin YhaV;protein_id=WP_000347273.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4016135 4016944 . - . ID=gene3956;Name=SH03_RS19830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19830;old_locus_tag=SH03_19840 NZ_CP010441.1 Protein Homology CDS 4016135 4016944 . - 0 ID=cds3858;Parent=gene3956;Dbxref=Genbank:WP_000072187.1;Name=WP_000072187.1;Note=transcriptional repressor for the agaZVWA and agaSYBCDI operons;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_000072187.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4017193 4018473 . + . ID=gene3957;Name=SH03_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19835;old_locus_tag=SH03_19845 NZ_CP010441.1 Protein Homology CDS 4017193 4018473 . + 0 ID=cds3859;Parent=gene3957;Dbxref=Genbank:WP_000681920.1;Name=WP_000681920.1;Note=with KbaY catalyzes the formation of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate from tagatose-1%2C6-bisphosphate%3B subunit Z may act as a chaperone for the Y subunit;gbkey=CDS;product=tagatose-1%2C6-bisphosphate aldolase;protein_id=WP_000681920.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4018496 4018969 . + . ID=gene3958;Name=SH03_RS19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19840;old_locus_tag=SH03_19850 NZ_CP010441.1 Protein Homology CDS 4018496 4018969 . + 0 ID=cds3860;Parent=gene3958;Dbxref=Genbank:WP_001336162.1;Name=WP_001336162.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3B involved in N-acetylgalactosamine transport;gbkey=CDS;product=N-acetylgalactosamine-specific phosphotransferase enzyme IIB component 2;protein_id=WP_001336162.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4018980 4019381 . + . ID=gene3959;Name=SH03_RS19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19845;old_locus_tag=SH03_19855 NZ_CP010441.1 Protein Homology CDS 4018980 4019381 . + 0 ID=cds3861;Parent=gene3959;Dbxref=Genbank:WP_000406204.1;Name=WP_000406204.1;gbkey=CDS;product=N-acetylgalactosamine permease IIC protein 2;protein_id=WP_000406204.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4019401 4019904 . + . ID=gene3960;Name=SH03_RS19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19850;old_locus_tag=SH03_19860 NZ_CP010441.1 Protein Homology CDS 4019401 4019904 . + 0 ID=cds3862;Parent=gene3960;Dbxref=Genbank:WP_001485507.1;Name=WP_001485507.1;gbkey=CDS;product=N-acetylgalactosamine-6-phosphate deacetylase;protein_id=WP_001485507.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4020255 4021409 . + . ID=gene3961;Name=SH03_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19855;old_locus_tag=SH03_19865 NZ_CP010441.1 Protein Homology CDS 4020255 4021409 . + 0 ID=cds3863;Parent=gene3961;Dbxref=Genbank:WP_001114869.1;Name=WP_001114869.1;gbkey=CDS;product=tagatose-6-phosphate ketose isomerase;protein_id=WP_001114869.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4021422 4022282 . + . ID=gene3962;Name=kbaY;gbkey=Gene;gene=kbaY;gene_biotype=protein_coding;gene_synonym=agaY;locus_tag=SH03_RS19860;old_locus_tag=SH03_19870 NZ_CP010441.1 Protein Homology CDS 4021422 4022282 . + 0 ID=cds3864;Parent=gene3962;Dbxref=Genbank:WP_000022766.1;Name=WP_000022766.1;Note=catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in enteric bacteria there are two D-tagatose 1%2C6-bisphosphate-specific aldolases: KbaY (also called AgaY)%2C involved in catabolism of N-acetyl-galactosamine and D-galactosamine%2C and GatY which is part of the galactitol catabolism pathway;gbkey=CDS;gene=kbaY;product=tagatose-1%2C6-bisphosphate aldolase;protein_id=WP_000022766.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4022449 4022925 . + . ID=gene3963;Name=SH03_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19865;old_locus_tag=SH03_19875 NZ_CP010441.1 Protein Homology CDS 4022449 4022925 . + 0 ID=cds3865;Parent=gene3963;Dbxref=Genbank:WP_000203711.1;Name=WP_000203711.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3B involved in N-acetylgalactosamine transport;gbkey=CDS;product=N-acetylgalactosamine-specific phosphotransferase enzyme IIB component 1;protein_id=WP_000203711.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4022964 4023767 . + . ID=gene3964;Name=SH03_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19870;old_locus_tag=SH03_19880 NZ_CP010441.1 Protein Homology CDS 4022964 4023767 . + 0 ID=cds3866;Parent=gene3964;Dbxref=Genbank:WP_000544489.1;Name=WP_000544489.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3Bprotein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3B involved in N-acetylgalactosamine transport;gbkey=CDS;product=N-acetylgalactosamine permease IIC component 1;protein_id=WP_000544489.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4023757 4024548 . + . ID=gene3965;Name=SH03_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19875;old_locus_tag=SH03_19885 NZ_CP010441.1 Protein Homology CDS 4023757 4024548 . + 0 ID=cds3867;Parent=gene3965;Dbxref=Genbank:WP_000534347.1;Name=WP_000534347.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IID with IIC forms the translocation channel%3B involved in N-acetylgalactosamine transport;gbkey=CDS;product=N-acetylgalactosamine permease IID component;protein_id=WP_000534347.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4024603 4025304 . + . ID=gene3966;Name=SH03_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19880;old_locus_tag=SH03_19890 NZ_CP010441.1 Protein Homology CDS 4024603 4025304 . + 0 ID=cds3868;Parent=gene3966;Dbxref=Genbank:WP_038432662.1;Name=WP_038432662.1;gbkey=CDS;product=galactosamine-6-phosphate isomerase;protein_id=WP_038432662.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4025705 4026289 . + . ID=gene3967;Name=SH03_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19885;old_locus_tag=SH03_19895 NZ_CP010441.1 Protein Homology CDS 4025705 4026289 . + 0 ID=cds3869;Parent=gene3967;Dbxref=Genbank:WP_001045432.1;Name=WP_001045432.1;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=WP_001045432.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4026369 4027064 . + . ID=gene3968;Name=SH03_RS19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19890;old_locus_tag=SH03_19900 NZ_CP010441.1 Protein Homology CDS 4026369 4027064 . + 0 ID=cds3870;Parent=gene3968;Dbxref=Genbank:WP_000044775.1;Name=WP_000044775.1;gbkey=CDS;product=fimbrial chaperone;protein_id=WP_000044775.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4027093 4029609 . + . ID=gene3969;Name=SH03_RS19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19895;old_locus_tag=SH03_19905 NZ_CP010441.1 Protein Homology CDS 4027093 4029609 . + 0 ID=cds3871;Parent=gene3969;Dbxref=Genbank:WP_001355538.1;Name=WP_001355538.1;gbkey=CDS;product=outer membrane usher protein YraJ;protein_id=WP_001355538.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4029620 4030711 . + . ID=gene3970;Name=SH03_RS19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19900;old_locus_tag=SH03_19910 NZ_CP010441.1 Protein Homology CDS 4029620 4030711 . + 0 ID=cds3872;Parent=gene3970;Dbxref=Genbank:WP_000816992.1;Name=WP_000816992.1;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=WP_000816992.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4030754 4031614 . - . ID=gene3971;Name=SH03_RS19905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19905;old_locus_tag=SH03_19915 NZ_CP010441.1 Protein Homology CDS 4030754 4031614 . - 0 ID=cds3873;Parent=gene3971;Dbxref=Genbank:WP_000809262.1;Name=WP_000809262.1;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase I;protein_id=WP_000809262.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4031679 4033715 . + . ID=gene3972;Name=SH03_RS19910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19910;old_locus_tag=SH03_19920 NZ_CP010441.1 Protein Homology CDS 4031679 4033715 . + 0 ID=cds3874;Parent=gene3972;Dbxref=Genbank:WP_000249104.1;Name=WP_000249104.1;gbkey=CDS;product=penicillin-binding protein activator LpoA;protein_id=WP_000249104.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4033673 4034068 . + . ID=gene3973;Name=SH03_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19915;old_locus_tag=SH03_19925 NZ_CP010441.1 Protein Homology CDS 4033673 4034068 . + 0 ID=cds3875;Parent=gene3973;Dbxref=Genbank:WP_000246830.1;Name=WP_000246830.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000246830.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4034088 4034678 . + . ID=gene3974;Name=SH03_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19920;old_locus_tag=SH03_19930 NZ_CP010441.1 Protein Homology CDS 4034088 4034678 . + 0 ID=cds3876;Parent=gene3974;Dbxref=Genbank:WP_001158034.1;Name=WP_001158034.1;Note=Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein;gbkey=CDS;product=DnaA initiator-associating protein DiaA;protein_id=WP_001158034.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4034688 4035263 . + . ID=gene3975;Name=SH03_RS19925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19925;old_locus_tag=SH03_19935 NZ_CP010441.1 Protein Homology CDS 4034688 4035263 . + 0 ID=cds3877;Parent=gene3975;Dbxref=Genbank:WP_000646033.1;Name=WP_000646033.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000646033.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4035377 4036417 . - . ID=gene3976;Name=SH03_RS19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19930;old_locus_tag=SH03_19940 NZ_CP010441.1 Protein Homology CDS 4035377 4036417 . - 0 ID=cds3878;Parent=gene3976;Dbxref=Genbank:WP_000147574.1;Name=WP_000147574.1;gbkey=CDS;product=permease;protein_id=WP_000147574.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4036490 4037125 . - . ID=gene3977;Name=SH03_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19935;old_locus_tag=SH03_19945 NZ_CP010441.1 Protein Homology CDS 4036490 4037125 . - 0 ID=cds3879;Parent=gene3977;Dbxref=Genbank:WP_001300423.1;Name=WP_001300423.1;gbkey=CDS;product=nucleoside-diphosphate-sugar epimerase;protein_id=WP_001300423.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4037253 4037771 . + . ID=gene3978;Name=SH03_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19940;old_locus_tag=SH03_19950 NZ_CP010441.1 Protein Homology CDS 4037253 4037771 . + 0 ID=cds3880;Parent=gene3978;Dbxref=Genbank:WP_000037608.1;Name=WP_000037608.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000037608.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4037751 4038194 . - . ID=gene3979;Name=SH03_RS19945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19945;old_locus_tag=SH03_19955 NZ_CP010441.1 Protein Homology CDS 4037751 4038194 . - 0 ID=cds3881;Parent=gene3979;Dbxref=Genbank:WP_000449030.1;Name=WP_000449030.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000449030.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4038245 4038547 . + . ID=gene3980;Name=SH03_RS19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19950;old_locus_tag=SH03_19960 NZ_CP010441.1 Protein Homology CDS 4038245 4038547 . + 0 ID=cds3882;Parent=gene3980;Dbxref=Genbank:WP_000189333.1;Name=WP_000189333.1;gbkey=CDS;product=nuclease superfamily protein;protein_id=WP_000189333.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4038534 4039037 . - . ID=gene3981;Name=SH03_RS19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19955;old_locus_tag=SH03_19965 NZ_CP010441.1 Protein Homology CDS 4038534 4039037 . - 0 ID=cds3883;Parent=gene3981;Dbxref=Genbank:WP_000908554.1;Name=WP_000908554.1;gbkey=CDS;product=N-acetyltransferase;protein_id=WP_000908554.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4039031 4039555 . - . ID=gene3982;Name=SH03_RS19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19960;old_locus_tag=SH03_19970 NZ_CP010441.1 Protein Homology CDS 4039031 4039555 . - 0 ID=cds3884;Parent=gene3982;Dbxref=Genbank:WP_001295552.1;Name=WP_001295552.1;gbkey=CDS;product=SCP-2 sterol transfer family protein;protein_id=WP_001295552.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4039764 4040759 . + . ID=gene3983;Name=SH03_RS19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19965;old_locus_tag=SH03_19975 NZ_CP010441.1 Protein Homology CDS 4039764 4040759 . + 0 ID=cds3885;Parent=gene3983;Dbxref=Genbank:WP_001311152.1;Name=WP_001311152.1;gbkey=CDS;product=U32 peptidase;protein_id=WP_001311152.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4040768 4041646 . + . ID=gene3984;Name=SH03_RS19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19970;old_locus_tag=SH03_19980 NZ_CP010441.1 Protein Homology CDS 4040768 4041646 . + 0 ID=cds3886;Parent=gene3984;Dbxref=Genbank:WP_001301318.1;Name=WP_001301318.1;gbkey=CDS;product=U32 peptidase;protein_id=WP_001301318.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4041727 4042734 . + . ID=gene3985;Name=SH03_RS19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19975;old_locus_tag=SH03_19985 NZ_CP010441.1 Protein Homology CDS 4041727 4042734 . + 0 ID=cds3887;Parent=gene3985;Dbxref=Genbank:WP_000130380.1;Name=WP_000130380.1;gbkey=CDS;product=luciferase-like monooxygenase;protein_id=WP_000130380.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4042852 4044096 . - . ID=gene3986;Name=SH03_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19980;old_locus_tag=SH03_19990 NZ_CP010441.1 Protein Homology CDS 4042852 4044096 . - 0 ID=cds3888;Parent=gene3986;Dbxref=Genbank:WP_000224351.1;Name=WP_000224351.1;Note=tryptophan transporter of high affinity;gbkey=CDS;product=tryptophan-specific transporter;protein_id=WP_000224351.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4044112 4044249 . + . ID=gene3987;Name=SH03_RS19985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19985;old_locus_tag=SH03_19995 NZ_CP010441.1 Protein Homology CDS 4044112 4044249 . + 0 ID=cds3889;Parent=gene3987;Dbxref=Genbank:WP_000797816.1;Name=WP_000797816.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000797816.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4044250 4046139 . - . ID=gene3988;Name=SH03_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19990;old_locus_tag=SH03_20000 NZ_CP010441.1 Protein Homology CDS 4044250 4046139 . - 0 ID=cds3890;Parent=gene3988;Dbxref=Genbank:WP_001295553.1;Name=WP_001295553.1;Note=participates in the assembly of the large subunit of the ribosome%3B plays a key role in optimal cell growth at low temperature and is required for normal cell division;gbkey=CDS;product=DEAD/DEAH box family ATP-dependent RNA helicase;protein_id=WP_001295553.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4046319 4047203 . - . ID=gene3989;Name=SH03_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS19995;old_locus_tag=SH03_20005 NZ_CP010441.1 Protein Homology CDS 4046319 4047203 . - 0 ID=cds3891;Parent=gene3989;Dbxref=Genbank:WP_000802080.1;Name=WP_000802080.1;Note=lipoprotein that appears to be involved in cell division%3B interacts with the periplasmic protease Prc and may be activated by protease processing;gbkey=CDS;product=lipoprotein NlpI;protein_id=WP_000802080.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4047312 4049447 . - . ID=gene3990;Name=SH03_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20000;old_locus_tag=SH03_20010 NZ_CP010441.1 Protein Homology CDS 4047312 4049447 . - 0 ID=cds3892;Parent=gene3990;Dbxref=Genbank:WP_001295554.1;Name=WP_001295554.1;gbkey=CDS;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_001295554.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4049694 4049963 . - . ID=gene3991;Name=SH03_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20005;old_locus_tag=SH03_20015 NZ_CP010441.1 Protein Homology CDS 4049694 4049963 . - 0 ID=cds3893;Parent=gene3991;Dbxref=Genbank:WP_000059466.1;Name=WP_000059466.1;gbkey=CDS;product=30S ribosomal protein S15;protein_id=WP_000059466.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4050112 4051056 . - . ID=gene3992;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=SH03_RS20010;old_locus_tag=SH03_20020 NZ_CP010441.1 Protein Homology CDS 4050112 4051056 . - 0 ID=cds3894;Parent=gene3992;Dbxref=Genbank:WP_000089698.1;Name=WP_000089698.1;Note=catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs;gbkey=CDS;gene=truB;product=tRNA pseudouridine synthase B;protein_id=WP_000089698.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4051056 4051457 . - . ID=gene3993;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=SH03_RS20015;old_locus_tag=SH03_20025 NZ_CP010441.1 Protein Homology CDS 4051056 4051457 . - 0 ID=cds3895;Parent=gene3993;Dbxref=Genbank:WP_001040205.1;Name=WP_001040205.1;Note=associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock;gbkey=CDS;gene=rbfA;product=ribosome-binding factor A;protein_id=WP_001040205.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4051621 4054293 . - . ID=gene3994;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=SH03_RS20020;old_locus_tag=SH03_20030 NZ_CP010441.1 Protein Homology CDS 4051621 4054293 . - 0 ID=cds3896;Parent=gene3994;Dbxref=Genbank:WP_000133044.1;Name=WP_000133044.1;Note=Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex;gbkey=CDS;gene=infB;product=translation initiation factor IF-2;protein_id=WP_000133044.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4054318 4055805 . - . ID=gene3995;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=SH03_RS20025;old_locus_tag=SH03_20035 NZ_CP010441.1 Protein Homology CDS 4054318 4055805 . - 0 ID=cds3897;Parent=gene3995;Dbxref=Genbank:WP_001031057.1;Name=WP_001031057.1;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;product=transcription termination/antitermination protein NusA;protein_id=WP_001031057.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4055833 4056285 . - . ID=gene3996;Name=SH03_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20030;old_locus_tag=SH03_20040 NZ_CP010441.1 Protein Homology CDS 4055833 4056285 . - 0 ID=cds3898;Parent=gene3996;Dbxref=Genbank:WP_001300397.1;Name=WP_001300397.1;Note=required for the maturation of the 30S ribosomal subunits;gbkey=CDS;product=ribosome maturation factor RimP;protein_id=WP_001300397.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4056492 4056568 . - . ID=gene3997;Name=SH03_RS20035;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS20035;old_locus_tag=SH03_20045 NZ_CP010441.1 tRNAscan-SE tRNA 4056492 4056568 . - . ID=rna98;Parent=gene3997;anticodon=(pos:complement(4056532..4056534));gbkey=tRNA;product=tRNA-Met NZ_CP010441.1 tRNAscan-SE exon 4056492 4056568 . - . ID=id210;Parent=rna98;anticodon=(pos:complement(4056532..4056534));gbkey=tRNA;product=tRNA-Met NZ_CP010441.1 RefSeq gene 4056916 4058259 . + . ID=gene3998;Name=SH03_RS20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20040;old_locus_tag=SH03_20050 NZ_CP010441.1 Protein Homology CDS 4056916 4058259 . + 0 ID=cds3899;Parent=gene3998;Dbxref=Genbank:WP_000207680.1;Name=WP_000207680.1;Note=catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis;gbkey=CDS;product=argininosuccinate synthase;protein_id=WP_000207680.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4058267 4059784 . - . ID=gene3999;Name=SH03_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20045;old_locus_tag=SH03_20055 NZ_CP010441.1 Protein Homology CDS 4058267 4059784 . - 0 ID=cds3900;Parent=gene3999;Dbxref=Genbank:WP_000250685.1;Name=WP_000250685.1;gbkey=CDS;product=phosphate starvation-inducible protein PsiE;protein_id=WP_000250685.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4060351 4060437 . - . ID=gene4000;Name=SH03_RS20050;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS20050;old_locus_tag=SH03_20060 NZ_CP010441.1 tRNAscan-SE tRNA 4060351 4060437 . - . ID=rna99;Parent=gene4000;anticodon=(pos:complement(4060401..4060403));gbkey=tRNA;product=tRNA-Leu NZ_CP010441.1 tRNAscan-SE exon 4060351 4060437 . - . ID=id211;Parent=rna99;anticodon=(pos:complement(4060401..4060403));gbkey=tRNA;product=tRNA-Leu NZ_CP010441.1 RefSeq gene 4060452 4060784 . - . ID=gene4001;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=SH03_RS20055;old_locus_tag=SH03_20065 NZ_CP010441.1 Protein Homology CDS 4060452 4060784 . - 0 ID=cds3901;Parent=gene4001;Dbxref=Genbank:WP_001295556.1;Name=WP_001295556.1;gbkey=CDS;gene=secG;product=protein-export membrane protein SecG;protein_id=WP_001295556.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4061012 4062349 . - . ID=gene4002;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=SH03_RS20060;old_locus_tag=SH03_20070 NZ_CP010441.1 Protein Homology CDS 4061012 4062349 . - 0 ID=cds3902;Parent=gene4002;Dbxref=Genbank:WP_000071134.1;Name=WP_000071134.1;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;product=phosphoglucosamine mutase;protein_id=WP_000071134.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4062342 4063190 . - . ID=gene4003;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=SH03_RS20065;old_locus_tag=SH03_20075 NZ_CP010441.1 Protein Homology CDS 4062342 4063190 . - 0 ID=cds3903;Parent=gene4003;Dbxref=Genbank:WP_000764731.1;Name=WP_000764731.1;Note=catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate;gbkey=CDS;gene=folP;product=dihydropteroate synthase;protein_id=WP_000764731.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4063280 4065214 . - . ID=gene4004;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;gene_synonym=ftsH;locus_tag=SH03_RS20070;old_locus_tag=SH03_20080 NZ_CP010441.1 Protein Homology CDS 4063280 4065214 . - 0 ID=cds3904;Parent=gene4004;Dbxref=Genbank:WP_001107467.1;Name=WP_001107467.1;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;gbkey=CDS;gene=hflB;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107467.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4065314 4065943 . - . ID=gene4005;Name=rrmJ;gbkey=Gene;gene=rrmJ;gene_biotype=protein_coding;locus_tag=SH03_RS20075;old_locus_tag=SH03_20085 NZ_CP010441.1 Protein Homology CDS 4065314 4065943 . - 0 ID=cds3905;Parent=gene4005;Dbxref=Genbank:WP_000145975.1;Name=WP_000145975.1;Note=Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit;gbkey=CDS;gene=rrmJ;product=ribosomal RNA large subunit methyltransferase E;protein_id=WP_000145975.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4066069 4066362 . + . ID=gene4006;Name=SH03_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20080;old_locus_tag=SH03_20090 NZ_CP010441.1 Protein Homology CDS 4066069 4066362 . + 0 ID=cds3906;Parent=gene4006;Dbxref=Genbank:WP_001054420.1;Name=WP_001054420.1;Note=RNA binding protein found associated to pre-50S subunit of the ribosome%3B putative role in ribosome assembly%3B necessary for optimal growth but not cell viability;gbkey=CDS;product=RNA-binding protein;protein_id=WP_001054420.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4066518 4066994 . - . ID=gene4007;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=SH03_RS20085;old_locus_tag=SH03_20095 NZ_CP010441.1 Protein Homology CDS 4066518 4066994 . - 0 ID=cds3907;Parent=gene4007;Dbxref=Genbank:WP_001148001.1;Name=WP_001148001.1;Note=necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus;gbkey=CDS;gene=greA;product=transcription elongation factor GreA;protein_id=WP_001148001.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4067242 4068675 . + . ID=gene4008;Name=SH03_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20090;old_locus_tag=SH03_20100 NZ_CP010441.1 Protein Homology CDS 4067242 4068675 . + 0 ID=cds3908;Parent=gene4008;Dbxref=Genbank:WP_001212622.1;Name=WP_001212622.1;Note=penicillin binding protein 4%3B penicillin sensitive%3B catalyzes the formation of D-alanine from D-alanyl-D-alanine%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_001212622.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4068861 4070033 . - . ID=gene4009;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;gene_synonym=cgtA,obg,yhbZ;locus_tag=SH03_RS20095;old_locus_tag=SH03_20105 NZ_CP010441.1 Protein Homology CDS 4068861 4070033 . - 0 ID=cds3909;Parent=gene4009;Dbxref=Genbank:WP_000673575.1;Name=WP_000673575.1;Note=ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;gbkey=CDS;gene=obgE;product=GTPase CgtA;protein_id=WP_000673575.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4070049 4071014 . - . ID=gene4010;Name=SH03_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20100;old_locus_tag=SH03_20110 NZ_CP010441.1 Protein Homology CDS 4070049 4071014 . - 0 ID=cds3910;Parent=gene4010;Dbxref=Genbank:WP_000813037.1;Name=WP_000813037.1;gbkey=CDS;product=transporter;protein_id=WP_000813037.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4071141 4071398 . - . ID=gene4011;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=SH03_RS20105;old_locus_tag=SH03_20115 NZ_CP010441.1 Protein Homology CDS 4071141 4071398 . - 0 ID=cds3911;Parent=gene4011;Dbxref=Genbank:WP_000940595.1;Name=WP_000940595.1;Note=involved in the peptidyltransferase reaction during translation;gbkey=CDS;gene=rpmA;product=50S ribosomal protein L27;protein_id=WP_000940595.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4071419 4071730 . - . ID=gene4012;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=SH03_RS20110;old_locus_tag=SH03_20120 NZ_CP010441.1 Protein Homology CDS 4071419 4071730 . - 0 ID=cds3912;Parent=gene4012;Dbxref=Genbank:WP_000271401.1;Name=WP_000271401.1;gbkey=CDS;gene=rplU;product=50S ribosomal protein L21;protein_id=WP_000271401.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4071989 4072960 . + . ID=gene4013;Name=SH03_RS20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20115;old_locus_tag=SH03_20125 NZ_CP010441.1 Protein Homology CDS 4071989 4072960 . + 0 ID=cds3913;Parent=gene4013;Dbxref=Genbank:WP_001047336.1;Name=WP_001047336.1;gbkey=CDS;product=octaprenyl-diphosphate synthase;protein_id=WP_001047336.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4073188 4073466 . + . ID=gene4014;Name=SH03_RS20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20120;old_locus_tag=SH03_20130 NZ_CP010441.1 Protein Homology CDS 4073188 4073466 . + 0 ID=cds3914;Parent=gene4014;Dbxref=Genbank:WP_000445413.1;Name=WP_000445413.1;Note=activator of maltose metabolism genes;gbkey=CDS;product=sugar fermentation stimulation protein B;protein_id=WP_000445413.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4073514 4074773 . - . ID=gene4015;Name=SH03_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20125;old_locus_tag=SH03_20135 NZ_CP010441.1 Protein Homology CDS 4073514 4074773 . - 0 ID=cds3915;Parent=gene4015;Dbxref=Genbank:WP_000357259.1;Name=WP_000357259.1;gbkey=CDS;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357259.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4074828 4075082 . - . ID=gene4016;Name=SH03_RS20130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20130;old_locus_tag=SH03_20140 NZ_CP010441.1 Protein Homology CDS 4074828 4075082 . - 0 ID=cds3916;Parent=gene4016;Dbxref=Genbank:WP_000429656.1;Name=WP_000429656.1;gbkey=CDS;product=acid stress protein IbaG;protein_id=WP_000429656.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4075242 4075535 . - . ID=gene4017;Name=SH03_RS20135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20135;old_locus_tag=SH03_20145 NZ_CP010441.1 Protein Homology CDS 4075242 4075535 . - 0 ID=cds3917;Parent=gene4017;Dbxref=Genbank:WP_000004488.1;Name=WP_000004488.1;gbkey=CDS;product=phospholipid ABC transporter-binding protein;protein_id=WP_000004488.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4075535 4076170 . - . ID=gene4018;Name=SH03_RS20140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20140;old_locus_tag=SH03_20150 NZ_CP010441.1 Protein Homology CDS 4075535 4076170 . - 0 ID=cds3918;Parent=gene4018;Dbxref=Genbank:WP_000476487.1;Name=WP_000476487.1;Note=involved in maintaining outer membrane lipid asymmetry;gbkey=CDS;product=phospholipid-binding protein;protein_id=WP_000476487.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4076189 4076740 . - . ID=gene4019;Name=SH03_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20145;old_locus_tag=SH03_20155 NZ_CP010441.1 Protein Homology CDS 4076189 4076740 . - 0 ID=cds3919;Parent=gene4019;Dbxref=Genbank:WP_001296448.1;Name=WP_001296448.1;gbkey=CDS;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_001296448.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4076745 4077527 . - . ID=gene4020;Name=SH03_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20150;old_locus_tag=SH03_20160 NZ_CP010441.1 Protein Homology CDS 4076745 4077527 . - 0 ID=cds3920;Parent=gene4020;Dbxref=Genbank:WP_000925795.1;Name=WP_000925795.1;gbkey=CDS;product=phospholipid ABC transporter permease;protein_id=WP_000925795.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4077535 4078344 . - . ID=gene4021;Name=SH03_RS20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20155;old_locus_tag=SH03_20165 NZ_CP010441.1 Protein Homology CDS 4077535 4078344 . - 0 ID=cds3921;Parent=gene4021;Dbxref=Genbank:WP_000438245.1;Name=WP_000438245.1;Note=ABC transporter maintaining outer membrane lipid asymmetry;gbkey=CDS;product=phospholipid import ATP-binding protein;protein_id=WP_000438245.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4078554 4079531 . + . ID=gene4022;Name=SH03_RS20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20160;old_locus_tag=SH03_20170 NZ_CP010441.1 Protein Homology CDS 4078554 4079531 . + 0 ID=cds3922;Parent=gene4022;Dbxref=Genbank:WP_000922901.1;Name=WP_000922901.1;Note=YrbG%3B inner membrane protein involved in cell envelope integrity%3B putative sodium ion/calcium ion exchanger%3B in E. coli it is non essential for cell viability%3B member of the YRBG family of cation/Ca2+ exchangers;gbkey=CDS;product=hypothetical protein;protein_id=WP_000922901.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4079545 4080531 . + . ID=gene4023;Name=SH03_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20165;old_locus_tag=SH03_20175 NZ_CP010441.1 Protein Homology CDS 4079545 4080531 . + 0 ID=cds3923;Parent=gene4023;Dbxref=Genbank:WP_001295557.1;Name=WP_001295557.1;gbkey=CDS;product=arabinose 5-phosphate isomerase KdsD;protein_id=WP_001295557.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4080552 4081118 . + . ID=gene4024;Name=SH03_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20170;old_locus_tag=SH03_20180 NZ_CP010441.1 Protein Homology CDS 4080552 4081118 . + 0 ID=cds3924;Parent=gene4024;Dbxref=Genbank:WP_000030005.1;Name=WP_000030005.1;Note=forms homotetramers%3B catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate%3B functions in lipopolysaccharide biosynthesis;gbkey=CDS;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC;protein_id=WP_000030005.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4081115 4081690 . + . ID=gene4025;Name=SH03_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20175;old_locus_tag=SH03_20185 NZ_CP010441.1 Protein Homology CDS 4081115 4081690 . + 0 ID=cds3925;Parent=gene4025;Dbxref=Genbank:WP_000030537.1;Name=WP_000030537.1;gbkey=CDS;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000030537.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4081659 4082216 . + . ID=gene4026;Name=SH03_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20180;old_locus_tag=SH03_20190 NZ_CP010441.1 Protein Homology CDS 4081659 4082216 . + 0 ID=cds3926;Parent=gene4026;Dbxref=Genbank:WP_000669785.1;Name=WP_000669785.1;Note=LptA%3B periplasmic binding protein part of a putative ABC superfamily of uptake transporters%3B interacts with LptB protein%2C the ATP binding component of the uptake system;gbkey=CDS;product=LPS export system protein LptA;protein_id=WP_000669785.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4082223 4082948 . + . ID=gene4027;Name=SH03_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20185;old_locus_tag=SH03_20195 NZ_CP010441.1 Protein Homology CDS 4082223 4082948 . + 0 ID=cds3927;Parent=gene4027;Dbxref=Genbank:WP_000224099.1;Name=WP_000224099.1;gbkey=CDS;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224099.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4082996 4084429 . + . ID=gene4028;Name=SH03_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20190;old_locus_tag=SH03_20200 NZ_CP010441.1 Protein Homology CDS 4082996 4084429 . + 0 ID=cds3928;Parent=gene4028;Dbxref=Genbank:WP_000809057.1;Name=WP_000809057.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism%3B the rhizobia often have 2 copies of this sigma factor%3B in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation%3B in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions%2C rpoN1 gene was regulated in response to oxygen;gbkey=CDS;product=RNA polymerase sigma-54 factor;protein_id=WP_000809057.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4084452 4084739 . + . ID=gene4029;Name=SH03_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20195;old_locus_tag=SH03_20205 NZ_CP010441.1 Protein Homology CDS 4084452 4084739 . + 0 ID=cds3929;Parent=gene4029;Dbxref=Genbank:WP_001176599.1;Name=WP_001176599.1;Note=YhbH%3B resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase%3B binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization)%3B seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing;gbkey=CDS;product=ribosome hibernation promoting factor;protein_id=WP_001176599.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4084857 4085348 . + . ID=gene4030;Name=SH03_RS20200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20200;old_locus_tag=SH03_20210 NZ_CP010441.1 Protein Homology CDS 4084857 4085348 . + 0 ID=cds3930;Parent=gene4030;Dbxref=Genbank:WP_000183676.1;Name=WP_000183676.1;Note=involved in nitrogen metabolism%3B protein IIA is phosphorylated by enzyme I(Ntr);gbkey=CDS;product=nitrogen regulatory protein;protein_id=WP_000183676.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4085394 4086248 . + . ID=gene4031;Name=SH03_RS20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20205;old_locus_tag=SH03_20215 NZ_CP010441.1 Protein Homology CDS 4085394 4086248 . + 0 ID=cds3931;Parent=gene4031;Dbxref=Genbank:WP_000243741.1;Name=WP_000243741.1;Note=glucosamine-6-phosphate regulated%3B inactivates the glmS upregulator glmZ;gbkey=CDS;product=glmZ(sRNA)-inactivating NTPase;protein_id=WP_000243741.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4086245 4086517 . + . ID=gene4032;Name=SH03_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20210;old_locus_tag=SH03_20220 NZ_CP010441.1 Protein Homology CDS 4086245 4086517 . + 0 ID=cds3932;Parent=gene4032;Dbxref=Genbank:WP_000216791.1;Name=WP_000216791.1;gbkey=CDS;product=phosphocarrier protein NPr;protein_id=WP_000216791.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4086731 4087363 . + . ID=gene4033;Name=SH03_RS20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20215;old_locus_tag=SH03_20225 NZ_CP010441.1 Protein Homology CDS 4086731 4087363 . + 0 ID=cds3933;Parent=gene4033;Dbxref=Genbank:WP_000620405.1;Name=WP_000620405.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000620405.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 4087481 4088684 . + . ID=id212;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 4087631 4088611 . - . ID=gene4034;Name=SH03_RS20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20220;old_locus_tag=SH03_20230 NZ_CP010441.1 Protein Homology CDS 4087631 4088611 . - 0 ID=cds3934;Parent=gene4034;Dbxref=Genbank:WP_000019403.1;Name=WP_000019403.1;gbkey=CDS;product=transposase;protein_id=WP_000019403.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4088610 4088858 . + . ID=gene4035;Name=SH03_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20225;old_locus_tag=SH03_20235 NZ_CP010441.1 Protein Homology CDS 4088610 4088858 . + 0 ID=cds3935;Parent=gene4035;Dbxref=Genbank:WP_000981817.1;Name=WP_000981817.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000981817.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4088855 4089571 . + . ID=gene4036;Name=SH03_RS20230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20230;old_locus_tag=SH03_20240 NZ_CP010441.1 Protein Homology CDS 4088855 4089571 . + 0 ID=cds3936;Parent=gene4036;Dbxref=Genbank:WP_001067008.1;Name=WP_001067008.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001067008.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4089756 4090883 . + . ID=gene4037;Name=SH03_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20235;old_locus_tag=SH03_20245 NZ_CP010441.1 Protein Homology CDS 4089756 4090883 . + 0 ID=cds3937;Parent=gene4037;Dbxref=Genbank:WP_000445111.1;Name=WP_000445111.1;gbkey=CDS;product=DUF1016 domain-containing protein;protein_id=WP_000445111.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4090943 4091407 . - . ID=gene4038;Name=SH03_RS20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20240;old_locus_tag=SH03_20250 NZ_CP010441.1 Protein Homology CDS 4090943 4091407 . - 0 ID=cds3938;Parent=gene4038;Dbxref=Genbank:WP_000979882.1;Name=WP_000979882.1;gbkey=CDS;product=DUF386 domain-containing protein;protein_id=WP_000979882.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4091404 4092279 . - . ID=gene4039;Name=SH03_RS20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20245;old_locus_tag=SH03_20255 NZ_CP010441.1 Protein Homology CDS 4091404 4092279 . - 0 ID=cds3939;Parent=gene4039;Dbxref=Genbank:WP_000209011.1;Name=WP_000209011.1;Note=catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein;gbkey=CDS;product=N-acetylmannosamine kinase;protein_id=WP_000209011.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4092276 4092965 . - . ID=gene4040;Name=SH03_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20250;old_locus_tag=SH03_20260 NZ_CP010441.1 Protein Homology CDS 4092276 4092965 . - 0 ID=cds3940;Parent=gene4040;Dbxref=Genbank:WP_000054239.1;Name=WP_000054239.1;Note=Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate;gbkey=CDS;product=N-acetylmannosamine-6-P epimerase;protein_id=WP_000054239.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4093013 4094503 . - . ID=gene4041;Name=SH03_RS20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20255;old_locus_tag=SH03_20265 NZ_CP010441.1 Protein Homology CDS 4093013 4094503 . - 0 ID=cds3941;Parent=gene4041;Dbxref=Genbank:WP_000108454.1;Name=WP_000108454.1;gbkey=CDS;product=sialic acid transporter;protein_id=WP_000108454.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4094612 4095505 . - . ID=gene4042;Name=SH03_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20260;old_locus_tag=SH03_20270 NZ_CP010441.1 Protein Homology CDS 4094612 4095505 . - 0 ID=cds3942;Parent=gene4042;Dbxref=Genbank:WP_000224714.1;Name=WP_000224714.1;Note=catalyzes the formation of pyruvate and N-acetylmannosamine from N-acetylneuraminic acid;gbkey=CDS;product=N-acetylneuraminate lyase;protein_id=WP_000224714.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4095627 4096418 . - . ID=gene4043;Name=SH03_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20265;old_locus_tag=SH03_20275 NZ_CP010441.1 Protein Homology CDS 4095627 4096418 . - 0 ID=cds3943;Parent=gene4043;Dbxref=Genbank:WP_000523845.1;Name=WP_000523845.1;Note=Transcriptional repressor of the nan operon that encodes proteins involved in sialic acid utilization;gbkey=CDS;product=transcriptional regulator NanR;protein_id=WP_000523845.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4096798 4098165 . + . ID=gene4044;Name=SH03_RS20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20270;old_locus_tag=SH03_20280 NZ_CP010441.1 Protein Homology CDS 4096798 4098165 . + 0 ID=cds3944;Parent=gene4044;Dbxref=Genbank:WP_000467018.1;Name=WP_000467018.1;Note=YhcL%3B uncharacterized member of the DcuC family of anaerobic dicarboxylate transporters%3B probable role in transport of carboxylates across the inner membrane from the periplasm%3B its encoding gene is not essential for growth and is probably cryptic;gbkey=CDS;product=transporter;protein_id=WP_000467018.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4098208 4098705 . - . ID=gene4045;Name=SH03_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20275;old_locus_tag=SH03_20285 NZ_CP010441.1 Protein Homology CDS 4098208 4098705 . - 0 ID=cds3945;Parent=gene4045;Dbxref=Genbank:WP_000366129.1;Name=WP_000366129.1;gbkey=CDS;product=stringent starvation protein B;protein_id=WP_000366129.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4098711 4099349 . - . ID=gene4046;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=SH03_RS20280;old_locus_tag=SH03_20290 NZ_CP010441.1 Protein Homology CDS 4098711 4099349 . - 0 ID=cds3946;Parent=gene4046;Dbxref=Genbank:WP_000257293.1;Name=WP_000257293.1;Note=transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation;gbkey=CDS;gene=sspA;product=stringent starvation protein A;protein_id=WP_000257293.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4099744 4100136 . - . ID=gene4047;Name=SH03_RS20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20285;old_locus_tag=SH03_20295 NZ_CP010441.1 Protein Homology CDS 4099744 4100136 . - 0 ID=cds3947;Parent=gene4047;Dbxref=Genbank:WP_000829818.1;Name=WP_000829818.1;gbkey=CDS;product=30S ribosomal protein S9;protein_id=WP_000829818.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4100152 4100580 . - . ID=gene4048;Name=SH03_RS20290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20290;old_locus_tag=SH03_20300 NZ_CP010441.1 Protein Homology CDS 4100152 4100580 . - 0 ID=cds3948;Parent=gene4048;Dbxref=Genbank:WP_000847559.1;Name=WP_000847559.1;gbkey=CDS;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4100799 4101926 . - . ID=gene4049;Name=SH03_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20295;old_locus_tag=SH03_20305 NZ_CP010441.1 Protein Homology CDS 4100799 4101926 . - 0 ID=cds3949;Parent=gene4049;Dbxref=Genbank:WP_001192332.1;Name=WP_001192332.1;gbkey=CDS;product=cell division protein ZapE;protein_id=WP_001192332.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4102120 4102518 . + . ID=gene4050;Name=SH03_RS20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20300;old_locus_tag=SH03_20310 NZ_CP010441.1 Protein Homology CDS 4102120 4102518 . + 0 ID=cds3950;Parent=gene4050;Dbxref=Genbank:WP_001295270.1;Name=WP_001295270.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001295270.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4102672 4104039 . + . ID=gene4051;Name=SH03_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20305;old_locus_tag=SH03_20315 NZ_CP010441.1 Protein Homology CDS 4102672 4104039 . + 0 ID=cds3951;Parent=gene4051;Dbxref=Genbank:WP_001295271.1;Name=WP_001295271.1;gbkey=CDS;product=periplasmic pH-dependent serine endoprotease DegQ;protein_id=WP_001295271.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4104129 4105196 . + . ID=gene4052;Name=SH03_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20310;old_locus_tag=SH03_20320 NZ_CP010441.1 Protein Homology CDS 4104129 4105196 . + 0 ID=cds3952;Parent=gene4052;Dbxref=Genbank:WP_000497723.1;Name=WP_000497723.1;gbkey=CDS;product=serine endoprotease DegS;protein_id=WP_000497723.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4105259 4106197 . - . ID=gene4053;Name=SH03_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20315;old_locus_tag=SH03_20325 NZ_CP010441.1 Protein Homology CDS 4105259 4106197 . - 0 ID=cds3953;Parent=gene4053;Dbxref=Genbank:WP_001295272.1;Name=WP_001295272.1;Note=oxidizes malate to oxaloacetate;gbkey=CDS;product=malate dehydrogenase;protein_id=WP_001295272.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4106632 4107102 . + . ID=gene4054;Name=SH03_RS20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20320;old_locus_tag=SH03_20330 NZ_CP010441.1 Protein Homology CDS 4106632 4107102 . + 0 ID=cds3954;Parent=gene4054;Dbxref=Genbank:WP_001257846.1;Name=WP_001257846.1;Note=regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes;gbkey=CDS;product=arginine repressor;protein_id=WP_001257846.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4107467 4107730 . + . ID=gene4055;Name=SH03_RS20325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20325;old_locus_tag=SH03_20335 NZ_CP010441.1 Protein Homology CDS 4107467 4107730 . + 0 ID=cds3955;Parent=gene4055;Dbxref=Genbank:WP_000695690.1;Name=WP_000695690.1;gbkey=CDS;product=membrane protein;protein_id=WP_000695690.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4107786 4108058 . - . ID=gene4056;Name=SH03_RS20330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20330;old_locus_tag=SH03_20340 NZ_CP010441.1 Protein Homology CDS 4107786 4108058 . - 0 ID=cds3956;Parent=gene4056;Dbxref=Genbank:WP_001029013.1;Name=WP_001029013.1;gbkey=CDS;product=barnase inhibitor;protein_id=WP_001029013.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4108150 4110117 . - . ID=gene4057;Name=SH03_RS20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20335;old_locus_tag=SH03_20345 NZ_CP010441.1 Protein Homology CDS 4108150 4110117 . - 0 ID=cds3957;Parent=gene4057;Dbxref=Genbank:WP_000510965.1;Name=WP_000510965.1;Note=with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;gbkey=CDS;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_000510965.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4110123 4111055 . - . ID=gene4058;Name=SH03_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20340;old_locus_tag=SH03_20350 NZ_CP010441.1 Protein Homology CDS 4110123 4111055 . - 0 ID=cds3958;Parent=gene4058;Dbxref=Genbank:WP_000854021.1;Name=WP_000854021.1;Note=with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid%2C 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;gbkey=CDS;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000854021.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4111063 4111266 . - . ID=gene4059;Name=SH03_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20345;old_locus_tag=SH03_20355 NZ_CP010441.1 Protein Homology CDS 4111063 4111266 . - 0 ID=cds3959;Parent=gene4059;Dbxref=Genbank:WP_000051841.1;Name=WP_000051841.1;Note=membrane protein AaeX%3B the gene is a member of the aaeXAB operon;gbkey=CDS;product=protein AaeX;protein_id=WP_000051841.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4111449 4112378 . + . ID=gene4060;Name=SH03_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20350;old_locus_tag=SH03_20360 NZ_CP010441.1 Protein Homology CDS 4111449 4112378 . + 0 ID=cds3960;Parent=gene4060;Dbxref=Genbank:WP_000440317.1;Name=WP_000440317.1;Note=for aaeXAB operon;gbkey=CDS;product=HTH-type transcriptional activator AaeR;protein_id=WP_000440317.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4112512 4113957 . - . ID=gene4061;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=SH03_RS20355;old_locus_tag=SH03_20365 NZ_CP010441.1 Protein Homology CDS 4112512 4113957 . - 0 ID=cds3961;Parent=gene4061;Dbxref=Genbank:WP_000055909.1;Name=WP_000055909.1;Note=responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA;gbkey=CDS;gene=tldD;product=protease TldD;protein_id=WP_000055909.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 4113999 4114322 . + . ID=id213;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 4114387 4118187 . - . ID=gene4062;Name=SH03_RS20360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20360;old_locus_tag=SH03_20370 NZ_CP010441.1 Protein Homology CDS 4114387 4118187 . - 0 ID=cds3962;Parent=gene4062;Dbxref=Genbank:WP_038432666.1;Name=WP_038432666.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038432666.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4118255 4119724 . - . ID=gene4063;Name=SH03_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20365;old_locus_tag=SH03_20375 NZ_CP010441.1 Protein Homology CDS 4118255 4119724 . - 0 ID=cds3963;Parent=gene4063;Dbxref=Genbank:WP_000123197.1;Name=WP_000123197.1;Note=involved in the processing of the 5'end of 16S rRNA;gbkey=CDS;product=ribonuclease G;protein_id=WP_000123197.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4119714 4120307 . - . ID=gene4064;Name=SH03_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20370;old_locus_tag=SH03_20380 NZ_CP010441.1 Protein Homology CDS 4119714 4120307 . - 0 ID=cds3964;Parent=gene4064;Dbxref=Genbank:WP_000203105.1;Name=WP_000203105.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;product=septum formation inhibitor Maf;protein_id=WP_000203105.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4120316 4120804 . - . ID=gene4065;Name=SH03_RS20375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20375;old_locus_tag=SH03_20385 NZ_CP010441.1 Protein Homology CDS 4120316 4120804 . - 0 ID=cds3965;Parent=gene4065;Dbxref=Genbank:WP_000179409.1;Name=WP_000179409.1;Note=part of cell wall structural complex MreBCD%3B transmembrane component;gbkey=CDS;product=rod shape-determining protein MreD;protein_id=WP_000179409.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4120804 4121907 . - . ID=gene4066;Name=SH03_RS20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20380;old_locus_tag=SH03_20390 NZ_CP010441.1 Protein Homology CDS 4120804 4121907 . - 0 ID=cds3966;Parent=gene4066;Dbxref=Genbank:WP_000802511.1;Name=WP_000802511.1;Note=in some organisms this protein is a transmembrane protein while in others it is periplasmic%3B involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall;gbkey=CDS;product=cell shape-determining protein MreC;protein_id=WP_000802511.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4121973 4123016 . - . ID=gene4067;Name=SH03_RS20385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20385;old_locus_tag=SH03_20395 NZ_CP010441.1 Protein Homology CDS 4121973 4123016 . - 0 ID=cds3967;Parent=gene4067;Dbxref=Genbank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4123124 4123312 . + . ID=gene4068;Name=SH03_RS20390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20390;old_locus_tag=SH03_20400 NZ_CP010441.1 Protein Homology CDS 4123124 4123312 . + 0 ID=cds3968;Parent=gene4068;Dbxref=Genbank:WP_001303690.1;Name=WP_001303690.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001303690.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4123321 4125261 . - . ID=gene4069;Name=SH03_RS20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20395;old_locus_tag=SH03_20405 NZ_CP010441.1 Protein Homology CDS 4123321 4125261 . - 0 ID=cds3969;Parent=gene4069;Dbxref=Genbank:WP_001241469.1;Name=WP_001241469.1;Note=regulates the degradation of the small RNAs CsrB and CsrC%3B may function to targate RNase E to specific RNA molecules;gbkey=CDS;product=RNase E specificity factor CsrD;protein_id=WP_001241469.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4125413 4126387 . + . ID=gene4070;Name=SH03_RS20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20400;old_locus_tag=SH03_20410 NZ_CP010441.1 Protein Homology CDS 4125413 4126387 . + 0 ID=cds3970;Parent=gene4070;Dbxref=Genbank:WP_001148481.1;Name=WP_001148481.1;gbkey=CDS;product=acrylyl-CoA reductase AcuI;protein_id=WP_001148481.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4126445 4126546 . - . ID=gene4071;Name=SH03_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20405;old_locus_tag=SH03_20415 NZ_CP010441.1 Protein Homology CDS 4126445 4126546 . - 0 ID=cds3971;Parent=gene4071;Dbxref=Genbank:WP_011110633.1;Name=WP_011110633.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011110633.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4126673 4126792 . + . ID=gene4072;Name=SH03_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20410;old_locus_tag=SH03_20420 NZ_CP010441.1 Protein Homology CDS 4126673 4126792 . + 0 ID=cds3972;Parent=gene4072;Dbxref=Genbank:WP_001061198.1;Name=WP_001061198.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001061198.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4126796 4126960 . + . ID=gene4073;Name=SH03_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20415;old_locus_tag=SH03_20425 NZ_CP010441.1 Protein Homology CDS 4126796 4126960 . + 0 ID=cds3973;Parent=gene4073;Dbxref=Genbank:WP_001326891.1;Name=WP_001326891.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001326891.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4127365 4127835 . + . ID=gene4074;Name=SH03_RS20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20420;old_locus_tag=SH03_20430 NZ_CP010441.1 Protein Homology CDS 4127365 4127835 . + 0 ID=cds3974;Parent=gene4074;Dbxref=Genbank:WP_000354622.1;Name=WP_000354622.1;Note=composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=WP_000354622.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4127846 4129195 . + . ID=gene4075;Name=SH03_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20425;old_locus_tag=SH03_20435 NZ_CP010441.1 Protein Homology CDS 4127846 4129195 . + 0 ID=cds3975;Parent=gene4075;Dbxref=Genbank:WP_000884639.1;Name=WP_000884639.1;Note=an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884639.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4129304 4129546 . + . ID=gene4076;Name=SH03_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20430;old_locus_tag=SH03_20440 NZ_CP010441.1 Protein Homology CDS 4129304 4129546 . + 0 ID=cds3976;Parent=gene4076;Dbxref=Genbank:WP_000381173.1;Name=WP_000381173.1;gbkey=CDS;product=DUF997 domain-containing protein;protein_id=WP_000381173.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4129536 4130987 . + . ID=gene4077;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=SH03_RS20435;old_locus_tag=SH03_20445 NZ_CP010441.1 Protein Homology CDS 4129536 4130987 . + 0 ID=cds3977;Parent=gene4077;Dbxref=Genbank:WP_001175728.1;Name=WP_001175728.1;Note=mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase;gbkey=CDS;gene=panF;product=sodium/pantothenate symporter;protein_id=WP_001175728.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4130999 4131880 . + . ID=gene4078;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=SH03_RS20440;old_locus_tag=SH03_20450 NZ_CP010441.1 Protein Homology CDS 4130999 4131880 . + 0 ID=cds3978;Parent=gene4078;Dbxref=Genbank:WP_001145827.1;Name=WP_001145827.1;Note=methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype;gbkey=CDS;gene=prmA;product=ribosomal protein L11 methyltransferase;protein_id=WP_001145827.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4132209 4133174 . + . ID=gene4079;Name=SH03_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20445;old_locus_tag=SH03_20455 NZ_CP010441.1 Protein Homology CDS 4132209 4133174 . + 0 ID=cds3979;Parent=gene4079;Dbxref=Genbank:WP_001219652.1;Name=WP_001219652.1;gbkey=CDS;product=tRNA-dihydrouridine synthase B;protein_id=WP_001219652.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4133200 4133496 . + . ID=gene4080;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=SH03_RS20450;old_locus_tag=SH03_20460 NZ_CP010441.1 Protein Homology CDS 4133200 4133496 . + 0 ID=cds3980;Parent=gene4080;Dbxref=Genbank:WP_000462905.1;Name=WP_000462905.1;Note=Stimulates excision of phage lambda%3B affects Mu development%3B acts as an activator of rRNA and iRNA transcription;gbkey=CDS;gene=fis;product=Fis family transcriptional regulator;protein_id=WP_000462905.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4133582 4134466 . + . ID=gene4081;Name=SH03_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20455;old_locus_tag=SH03_20465 NZ_CP010441.1 Protein Homology CDS 4133582 4134466 . + 0 ID=cds3981;Parent=gene4081;Dbxref=Genbank:WP_001258895.1;Name=WP_001258895.1;gbkey=CDS;product=DNA adenine methyltransferase YhdJ;protein_id=WP_001258895.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4134550 4134729 . + . ID=gene4082;Name=SH03_RS20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20460;old_locus_tag=SH03_20470 NZ_CP010441.1 Protein Homology CDS 4134550 4134729 . + 0 ID=cds3982;Parent=gene4082;Dbxref=Genbank:WP_001295275.1;Name=WP_001295275.1;gbkey=CDS;product=transporter;protein_id=WP_001295275.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4134732 4135394 . - . ID=gene4083;Name=SH03_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20465;old_locus_tag=SH03_20475 NZ_CP010441.1 Protein Homology CDS 4134732 4135394 . - 0 ID=cds3983;Parent=gene4083;Dbxref=Genbank:WP_001129518.1;Name=WP_001129518.1;gbkey=CDS;product=acrEF/envCD operon repressor;protein_id=WP_001129518.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4135793 4136950 . + . ID=gene4084;Name=SH03_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20470;old_locus_tag=SH03_20480 NZ_CP010441.1 Protein Homology CDS 4135793 4136950 . + 0 ID=cds3984;Parent=gene4084;Dbxref=Genbank:WP_000160334.1;Name=WP_000160334.1;Note=with AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics;gbkey=CDS;product=MexX family efflux pump subunit;protein_id=WP_000160334.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4136962 4140066 . + . ID=gene4085;Name=SH03_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20475;old_locus_tag=SH03_20485 NZ_CP010441.1 Protein Homology CDS 4136962 4140066 . + 0 ID=cds3985;Parent=gene4085;Dbxref=Genbank:WP_001273238.1;Name=WP_001273238.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_001273238.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4140319 4140540 . + . ID=gene4086;Name=SH03_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20480;old_locus_tag=SH03_20490 NZ_CP010441.1 Protein Homology CDS 4140319 4140540 . + 0 ID=cds3986;Parent=gene4086;Dbxref=Genbank:WP_000825639.1;Name=WP_000825639.1;gbkey=CDS;product=membrane protein;protein_id=WP_000825639.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4140766 4140942 . + . ID=gene4087;Name=SH03_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20485;old_locus_tag=SH03_20495 NZ_CP010441.1 Protein Homology CDS 4140766 4140942 . + 0 ID=cds3987;Parent=gene4087;Dbxref=Genbank:WP_001387109.1;Name=WP_001387109.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001387109.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4141078 4141995 . + . ID=gene4088;Name=SH03_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20490;old_locus_tag=SH03_20500 NZ_CP010441.1 Protein Homology CDS 4141078 4141995 . + 0 ID=cds3988;Parent=gene4088;Dbxref=Genbank:WP_001381453.1;Name=WP_001381453.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_001381453.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4142063 4143244 . + . ID=gene4089;Name=SH03_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20495;old_locus_tag=SH03_20505 NZ_CP010441.1 Protein Homology CDS 4142063 4143244 . + 0 ID=cds3989;Parent=gene4089;Dbxref=Genbank:WP_000019655.1;Name=WP_000019655.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_000019655.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4143254 4144357 . + . ID=gene4090;Name=SH03_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20500;old_locus_tag=SH03_20510 NZ_CP010441.1 Protein Homology CDS 4143254 4144357 . + 0 ID=cds3990;Parent=gene4090;Dbxref=Genbank:WP_001300681.1;Name=WP_001300681.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_001300681.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4144365 4145123 . + . ID=gene4091;Name=SH03_RS20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20505;old_locus_tag=SH03_20515 NZ_CP010441.1 Protein Homology CDS 4144365 4145123 . + 0 ID=cds3991;Parent=gene4091;Dbxref=Genbank:WP_000078349.1;Name=WP_000078349.1;gbkey=CDS;product=amino acid ABC transporter ATPase;protein_id=WP_000078349.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 4145179 4145477 . + . ID=id214;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 4145354 4145469 . - . ID=gene4092;Name=SH03_RS20510;gbkey=Gene;gene_biotype=rRNA;locus_tag=SH03_RS20510;old_locus_tag=SH03_20520 NZ_CP010441.1 cmsearch rRNA 4145354 4145469 . - . ID=rna100;Parent=gene4092;gbkey=rRNA;product=5S ribosomal RNA NZ_CP010441.1 cmsearch exon 4145354 4145469 . - . ID=id215;Parent=rna100;gbkey=rRNA;product=5S ribosomal RNA NZ_CP010441.1 RefSeq gene 4145509 4145584 . - . ID=gene4093;Name=SH03_RS20515;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS20515;old_locus_tag=SH03_20525 NZ_CP010441.1 tRNAscan-SE tRNA 4145509 4145584 . - . ID=rna101;Parent=gene4093;anticodon=(pos:complement(4145549..4145551));gbkey=tRNA;product=tRNA-Thr NZ_CP010441.1 tRNAscan-SE exon 4145509 4145584 . - . ID=id216;Parent=rna101;anticodon=(pos:complement(4145549..4145551));gbkey=tRNA;product=tRNA-Thr NZ_CP010441.1 RefSeq repeat_region 4145591 4150923 . + . ID=id217;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 4145599 4145714 . - . ID=gene4094;Name=SH03_RS20520;gbkey=Gene;gene_biotype=rRNA;locus_tag=SH03_RS20520;old_locus_tag=SH03_20530 NZ_CP010441.1 cmsearch rRNA 4145599 4145714 . - . ID=rna102;Parent=gene4094;gbkey=rRNA;product=5S ribosomal RNA NZ_CP010441.1 cmsearch exon 4145599 4145714 . - . ID=id218;Parent=rna102;gbkey=rRNA;product=5S ribosomal RNA NZ_CP010441.1 RefSeq gene 4145792 4148721 . - . ID=gene4095;Name=SH03_RS20525;gbkey=Gene;gene_biotype=rRNA;locus_tag=SH03_RS20525;old_locus_tag=SH03_20535 NZ_CP010441.1 RefSeq rRNA 4145792 4148721 . - . ID=rna103;Parent=gene4095;gbkey=rRNA;product=23S ribosomal RNA NZ_CP010441.1 RefSeq exon 4145792 4148721 . - . ID=id219;Parent=rna103;gbkey=rRNA;product=23S ribosomal RNA NZ_CP010441.1 RefSeq gene 4148887 4148962 . - . ID=gene4096;Name=SH03_RS20530;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS20530;old_locus_tag=SH03_20540 NZ_CP010441.1 tRNAscan-SE tRNA 4148887 4148962 . - . ID=rna104;Parent=gene4096;anticodon=(pos:complement(4148927..4148929));gbkey=tRNA;product=tRNA-Ala NZ_CP010441.1 tRNAscan-SE exon 4148887 4148962 . - . ID=id220;Parent=rna104;anticodon=(pos:complement(4148927..4148929));gbkey=tRNA;product=tRNA-Ala NZ_CP010441.1 RefSeq gene 4149005 4149081 . - . ID=gene4097;Name=SH03_RS20535;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS20535;old_locus_tag=SH03_20545 NZ_CP010441.1 tRNAscan-SE tRNA 4149005 4149081 . - . ID=rna105;Parent=gene4097;anticodon=(pos:complement(4149045..4149047));gbkey=tRNA;product=tRNA-Ile NZ_CP010441.1 tRNAscan-SE exon 4149005 4149081 . - . ID=id221;Parent=rna105;anticodon=(pos:complement(4149045..4149047));gbkey=tRNA;product=tRNA-Ile NZ_CP010441.1 RefSeq gene 4149138 4150693 . - . ID=gene4098;Name=SH03_RS20540;gbkey=Gene;gene_biotype=rRNA;locus_tag=SH03_RS20540;old_locus_tag=SH03_20550 NZ_CP010441.1 RefSeq rRNA 4149138 4150693 . - . ID=rna106;Parent=gene4098;gbkey=rRNA;product=16S ribosomal RNA NZ_CP010441.1 RefSeq exon 4149138 4150693 . - . ID=id222;Parent=rna106;gbkey=rRNA;product=16S ribosomal RNA NZ_CP010441.1 RefSeq gene 4151165 4151719 . + . ID=gene4099;Name=SH03_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20545;old_locus_tag=SH03_20555 NZ_CP010441.1 Protein Homology CDS 4151165 4151719 . + 0 ID=cds3992;Parent=gene4099;Dbxref=Genbank:WP_001286216.1;Name=WP_001286216.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001286216.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4151695 4151952 . - . ID=gene4100;Name=SH03_RS20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20550;old_locus_tag=SH03_20560 NZ_CP010441.1 Protein Homology CDS 4151695 4151952 . - 0 ID=cds3993;Parent=gene4100;Dbxref=Genbank:WP_001070563.1;Name=WP_001070563.1;gbkey=CDS;product=DUF1488 domain-containing protein;protein_id=WP_001070563.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4151949 4152767 . - . ID=gene4101;Name=SH03_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20555;old_locus_tag=SH03_20565 NZ_CP010441.1 Protein Homology CDS 4151949 4152767 . - 0 ID=cds3994;Parent=gene4101;Dbxref=Genbank:WP_000451243.1;Name=WP_000451243.1;gbkey=CDS;product=shikimate dehydrogenase (NADP+);protein_id=WP_000451243.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4152772 4153344 . - . ID=gene4102;Name=SH03_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20560;old_locus_tag=SH03_20570 NZ_CP010441.1 Protein Homology CDS 4152772 4153344 . - 0 ID=cds3995;Parent=gene4102;Dbxref=Genbank:WP_001301412.1;Name=WP_001301412.1;Note=involved in the biosynthesis of the threonylcarbamoyladenosine (t6A) residue at position 37 of ANN-decoding tRNAs;gbkey=CDS;product=threonylcarbamoyl-AMP synthase;protein_id=WP_001301412.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4153349 4153891 . - . ID=gene4103;Name=SH03_RS20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20565;old_locus_tag=SH03_20575 NZ_CP010441.1 Protein Homology CDS 4153349 4153891 . - 0 ID=cds3996;Parent=gene4103;Dbxref=Genbank:WP_001129722.1;Name=WP_001129722.1;gbkey=CDS;product=ssDNA-binding protein%2C function unknown;protein_id=WP_001129722.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4153920 4154393 . - . ID=gene4104;Name=SH03_RS20570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20570;old_locus_tag=SH03_20580 NZ_CP010441.1 Protein Homology CDS 4153920 4154393 . - 0 ID=cds3997;Parent=gene4104;Dbxref=Genbank:WP_000460680.1;Name=WP_000460680.1;gbkey=CDS;product=protein Smg;protein_id=WP_000460680.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4154365 4155489 . - . ID=gene4105;Name=SH03_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20575;old_locus_tag=SH03_20585 NZ_CP010441.1 Protein Homology CDS 4154365 4155489 . - 0 ID=cds3998;Parent=gene4105;Dbxref=Genbank:WP_000228551.1;Name=WP_000228551.1;gbkey=CDS;product=protein smf;protein_id=WP_000228551.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4155619 4156128 . + . ID=gene4106;Name=SH03_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20580;old_locus_tag=SH03_20590 NZ_CP010441.1 Protein Homology CDS 4155619 4156128 . + 0 ID=cds3999;Parent=gene4106;Dbxref=Genbank:WP_000114984.1;Name=WP_000114984.1;gbkey=CDS;product=peptide deformylase;protein_id=WP_000114984.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4156143 4157090 . + . ID=gene4107;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=SH03_RS20585;old_locus_tag=SH03_20595 NZ_CP010441.1 Protein Homology CDS 4156143 4157090 . + 0 ID=cds4000;Parent=gene4107;Dbxref=Genbank:WP_000004473.1;Name=WP_000004473.1;Note=modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth;gbkey=CDS;gene=fmt;product=methionyl-tRNA formyltransferase;protein_id=WP_000004473.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4157136 4158425 . + . ID=gene4108;Name=SH03_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20590;old_locus_tag=SH03_20600 NZ_CP010441.1 Protein Homology CDS 4157136 4158425 . + 0 ID=cds4001;Parent=gene4108;Dbxref=Genbank:WP_000744778.1;Name=WP_000744778.1;Note=catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA%3B SAM-dependent methyltransferase;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase B;protein_id=WP_000744778.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4158447 4159823 . + . ID=gene4109;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;gene_synonym=sapG;locus_tag=SH03_RS20595;old_locus_tag=SH03_20605 NZ_CP010441.1 Protein Homology CDS 4158447 4159823 . + 0 ID=cds4002;Parent=gene4109;Dbxref=Genbank:WP_000691382.1;Name=WP_000691382.1;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain;gbkey=CDS;gene=trkA;product=trk system potassium uptake protein trkA;protein_id=WP_000691382.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4159953 4160363 . + . ID=gene4110;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=SH03_RS20600;old_locus_tag=SH03_20610 NZ_CP010441.1 Protein Homology CDS 4159953 4160363 . + 0 ID=cds4003;Parent=gene4110;Dbxref=Genbank:WP_000022442.1;Name=WP_000022442.1;Note=forms homopentamer%3B channel that opens in response to pressure or hypoosmotic shock;gbkey=CDS;gene=mscL;product=large-conductance mechanosensitive channel;protein_id=WP_000022442.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4160360 4160578 . - . ID=gene4111;Name=SH03_RS20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20605;old_locus_tag=SH03_20615 NZ_CP010441.1 Protein Homology CDS 4160360 4160578 . - 0 ID=cds4004;Parent=gene4111;Dbxref=Genbank:WP_000092696.1;Name=WP_000092696.1;gbkey=CDS;product=ribosome-rescue factor A;protein_id=WP_000092696.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4160634 4161059 . - . ID=gene4112;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=SH03_RS20610;old_locus_tag=SH03_20620 NZ_CP010441.1 Protein Homology CDS 4160634 4161059 . - 0 ID=cds4005;Parent=gene4112;Dbxref=Genbank:WP_000285607.1;Name=WP_000285607.1;Note=mediates expression of the zinc export protein ZntA in response to high levels of zinc%3B member of MerR family of transcriptional regulators;gbkey=CDS;gene=zntR;product=transcriptional regulator;protein_id=WP_000285607.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4161070 4161438 . - . ID=gene4113;Name=SH03_RS20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20615;old_locus_tag=SH03_20625 NZ_CP010441.1 Protein Homology CDS 4161070 4161438 . - 0 ID=cds4006;Parent=gene4113;Dbxref=Genbank:WP_000266486.1;Name=WP_000266486.1;gbkey=CDS;product=DUF1992 domain-containing protein;protein_id=WP_000266486.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4161545 4161928 . - . ID=gene4114;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=SH03_RS20620;old_locus_tag=SH03_20630 NZ_CP010441.1 Protein Homology CDS 4161545 4161928 . - 0 ID=cds4007;Parent=gene4114;Dbxref=Genbank:WP_001216368.1;Name=WP_001216368.1;Note=is a component of the macrolide binding site in the peptidyl transferase center;gbkey=CDS;gene=rplQ;product=50S ribosomal protein L17;protein_id=WP_001216368.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4161969 4162958 . - . ID=gene4115;Name=SH03_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20625;old_locus_tag=SH03_20635 NZ_CP010441.1 Protein Homology CDS 4161969 4162958 . - 0 ID=cds4008;Parent=gene4115;Dbxref=Genbank:WP_001162094.1;Name=WP_001162094.1;Note=catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme;gbkey=CDS;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4162984 4163604 . - . ID=gene4116;Name=SH03_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20630;old_locus_tag=SH03_20640 NZ_CP010441.1 Protein Homology CDS 4162984 4163604 . - 0 ID=cds4009;Parent=gene4116;Dbxref=Genbank:WP_000135224.1;Name=WP_000135224.1;gbkey=CDS;product=30S ribosomal protein S4;protein_id=WP_000135224.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4163638 4164027 . - . ID=gene4117;Name=SH03_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20635;old_locus_tag=SH03_20645 NZ_CP010441.1 Protein Homology CDS 4163638 4164027 . - 0 ID=cds4010;Parent=gene4117;Dbxref=Genbank:WP_001029684.1;Name=WP_001029684.1;gbkey=CDS;product=30S ribosomal protein S11;protein_id=WP_001029684.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4164044 4164400 . - . ID=gene4118;Name=SH03_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20640;old_locus_tag=SH03_20650 NZ_CP010441.1 Protein Homology CDS 4164044 4164400 . - 0 ID=cds4011;Parent=gene4118;Dbxref=Genbank:WP_000090775.1;Name=WP_000090775.1;gbkey=CDS;product=30S ribosomal protein S13;protein_id=WP_000090775.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4164547 4164663 . - . ID=gene4119;Name=SH03_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20645;old_locus_tag=SH03_20655 NZ_CP010441.1 Protein Homology CDS 4164547 4164663 . - 0 ID=cds4012;Parent=gene4119;Dbxref=Genbank:WP_000868187.1;Name=WP_000868187.1;gbkey=CDS;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4164695 4166026 . - . ID=gene4120;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=SH03_RS20650;old_locus_tag=SH03_20660 NZ_CP010441.1 Protein Homology CDS 4164695 4166026 . - 0 ID=cds4013;Parent=gene4120;Dbxref=Genbank:WP_038432669.1;Name=WP_038432669.1;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;gbkey=CDS;gene=secY;product=preprotein translocase subunit SecY;protein_id=WP_038432669.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4166034 4166468 . - . ID=gene4121;Name=SH03_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20655;old_locus_tag=SH03_20665 NZ_CP010441.1 Protein Homology CDS 4166034 4166468 . - 0 ID=cds4014;Parent=gene4121;Dbxref=Genbank:WP_001238914.1;Name=WP_001238914.1;gbkey=CDS;product=50S ribosomal protein L15;protein_id=WP_001238914.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4166472 4166651 . - . ID=gene4122;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=SH03_RS20660;old_locus_tag=SH03_20670 NZ_CP010441.1 Protein Homology CDS 4166472 4166651 . - 0 ID=cds4015;Parent=gene4122;Dbxref=Genbank:WP_001140433.1;Name=WP_001140433.1;Note=L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7;gbkey=CDS;gene=rpmD;product=50S ribosomal protein L30;protein_id=WP_001140433.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4166655 4167158 . - . ID=gene4123;Name=SH03_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20665;old_locus_tag=SH03_20675 NZ_CP010441.1 Protein Homology CDS 4166655 4167158 . - 0 ID=cds4016;Parent=gene4123;Dbxref=Genbank:WP_000940121.1;Name=WP_000940121.1;gbkey=CDS;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4167173 4167526 . - . ID=gene4124;Name=SH03_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20670;old_locus_tag=SH03_20680 NZ_CP010441.1 Protein Homology CDS 4167173 4167526 . - 0 ID=cds4017;Parent=gene4124;Dbxref=Genbank:WP_000358960.1;Name=WP_000358960.1;gbkey=CDS;product=50S ribosomal protein L18;protein_id=WP_000358960.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4167536 4168069 . - . ID=gene4125;Name=SH03_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20675;old_locus_tag=SH03_20685 NZ_CP010441.1 Protein Homology CDS 4167536 4168069 . - 0 ID=cds4018;Parent=gene4125;Dbxref=Genbank:WP_000091945.1;Name=WP_000091945.1;gbkey=CDS;product=50S ribosomal protein L6;protein_id=WP_000091945.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4168082 4168474 . - . ID=gene4126;Name=SH03_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20680;old_locus_tag=SH03_20690 NZ_CP010441.1 Protein Homology CDS 4168082 4168474 . - 0 ID=cds4019;Parent=gene4126;Dbxref=Genbank:WP_000062611.1;Name=WP_000062611.1;gbkey=CDS;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4168508 4168813 . - . ID=gene4127;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=SH03_RS20685;old_locus_tag=SH03_20695 NZ_CP010441.1 Protein Homology CDS 4168508 4168813 . - 0 ID=cds4020;Parent=gene4127;Dbxref=Genbank:WP_001118930.1;Name=WP_001118930.1;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif;gbkey=CDS;gene=rpsN;product=30S ribosomal protein S14;protein_id=WP_001118930.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4168828 4169367 . - . ID=gene4128;Name=SH03_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20690;old_locus_tag=SH03_20700 NZ_CP010441.1 Protein Homology CDS 4168828 4169367 . - 0 ID=cds4021;Parent=gene4128;Dbxref=Genbank:WP_001096200.1;Name=WP_001096200.1;gbkey=CDS;product=50S ribosomal protein L5;protein_id=WP_001096200.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4169382 4169696 . - . ID=gene4129;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=SH03_RS20695;old_locus_tag=SH03_20705 NZ_CP010441.1 Protein Homology CDS 4169382 4169696 . - 0 ID=cds4022;Parent=gene4129;Dbxref=Genbank:WP_000729185.1;Name=WP_000729185.1;Note=assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel;gbkey=CDS;gene=rplX;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4169707 4170078 . - . ID=gene4130;Name=SH03_RS20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20700;old_locus_tag=SH03_20710 NZ_CP010441.1 Protein Homology CDS 4169707 4170078 . - 0 ID=cds4023;Parent=gene4130;Dbxref=Genbank:WP_000613955.1;Name=WP_000613955.1;gbkey=CDS;product=50S ribosomal protein L14;protein_id=WP_000613955.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4170243 4170497 . - . ID=gene4131;Name=SH03_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20705;old_locus_tag=SH03_20715 NZ_CP010441.1 Protein Homology CDS 4170243 4170497 . - 0 ID=cds4024;Parent=gene4131;Dbxref=Genbank:WP_000130100.1;Name=WP_000130100.1;gbkey=CDS;product=30S ribosomal protein S17;protein_id=WP_000130100.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4170497 4170688 . - . ID=gene4132;Name=SH03_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20710;old_locus_tag=SH03_20720 NZ_CP010441.1 Protein Homology CDS 4170497 4170688 . - 0 ID=cds4025;Parent=gene4132;Dbxref=Genbank:WP_000644741.1;Name=WP_000644741.1;Note=one of the stabilizing components for the large ribosomal subunit;gbkey=CDS;product=50S ribosomal protein L29;protein_id=WP_000644741.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4170688 4171098 . - . ID=gene4133;Name=SH03_RS20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20715;old_locus_tag=SH03_20725 NZ_CP010441.1 Protein Homology CDS 4170688 4171098 . - 0 ID=cds4026;Parent=gene4133;Dbxref=Genbank:WP_000941212.1;Name=WP_000941212.1;gbkey=CDS;product=50S ribosomal protein L16;protein_id=WP_000941212.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4171111 4171812 . - . ID=gene4134;Name=SH03_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20720;old_locus_tag=SH03_20730 NZ_CP010441.1 Protein Homology CDS 4171111 4171812 . - 0 ID=cds4027;Parent=gene4134;Dbxref=Genbank:WP_000529945.1;Name=WP_000529945.1;gbkey=CDS;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4171830 4172162 . - . ID=gene4135;Name=SH03_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20725;old_locus_tag=SH03_20735 NZ_CP010441.1 Protein Homology CDS 4171830 4172162 . - 0 ID=cds4028;Parent=gene4135;Dbxref=Genbank:WP_000447529.1;Name=WP_000447529.1;gbkey=CDS;product=50S ribosomal protein L22;protein_id=WP_000447529.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4172177 4172455 . - . ID=gene4136;Name=SH03_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20730;old_locus_tag=SH03_20740 NZ_CP010441.1 Protein Homology CDS 4172177 4172455 . - 0 ID=cds4029;Parent=gene4136;Dbxref=Genbank:WP_001138117.1;Name=WP_001138117.1;gbkey=CDS;product=30S ribosomal protein S19;protein_id=WP_001138117.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4172472 4173293 . - . ID=gene4137;Name=SH03_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20735;old_locus_tag=SH03_20745 NZ_CP010441.1 Protein Homology CDS 4172472 4173293 . - 0 ID=cds4030;Parent=gene4137;Dbxref=Genbank:WP_000301864.1;Name=WP_000301864.1;gbkey=CDS;product=50S ribosomal protein L2;protein_id=WP_000301864.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4173311 4173613 . - . ID=gene4138;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=SH03_RS20740;old_locus_tag=SH03_20750 NZ_CP010441.1 Protein Homology CDS 4173311 4173613 . - 0 ID=cds4031;Parent=gene4138;Dbxref=Genbank:WP_000617544.1;Name=WP_000617544.1;Note=binds third domain of 23S rRNA and protein L29%3B part of exit tunnel;gbkey=CDS;gene=rplW;product=50S ribosomal protein L23;protein_id=WP_000617544.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4173610 4174215 . - . ID=gene4139;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=SH03_RS20745;old_locus_tag=SH03_20755 NZ_CP010441.1 Protein Homology CDS 4173610 4174215 . - 0 ID=cds4032;Parent=gene4139;Dbxref=Genbank:WP_038432672.1;Name=WP_038432672.1;Note=L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA;gbkey=CDS;gene=rplD;product=50S ribosomal protein L4;protein_id=WP_038432672.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4174226 4174855 . - . ID=gene4140;Name=SH03_RS20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20750;old_locus_tag=SH03_20760 NZ_CP010441.1 Protein Homology CDS 4174226 4174855 . - 0 ID=cds4033;Parent=gene4140;Dbxref=Genbank:WP_000579833.1;Name=WP_000579833.1;gbkey=CDS;product=50S ribosomal protein L3;protein_id=WP_000579833.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4174888 4175199 . - . ID=gene4141;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;gene_synonym=nusE;locus_tag=SH03_RS20755;old_locus_tag=SH03_20765 NZ_CP010441.1 Protein Homology CDS 4174888 4175199 . - 0 ID=cds4034;Parent=gene4141;Dbxref=Genbank:WP_001181004.1;Name=WP_001181004.1;Note=NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex;gbkey=CDS;gene=rpsJ;product=30S ribosomal protein S10;protein_id=WP_001181004.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4175437 4175856 . - . ID=gene4142;Name=SH03_RS20760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20760;old_locus_tag=SH03_20770 NZ_CP010441.1 Protein Homology CDS 4175437 4175856 . - 0 ID=cds4035;Parent=gene4142;Dbxref=Genbank:WP_000461450.1;Name=WP_000461450.1;Note=involved in type II protein secretion;gbkey=CDS;product=hypothetical protein;protein_id=WP_000461450.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4175858 4177327 . - . ID=gene4143;Name=SH03_RS20765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20765;old_locus_tag=SH03_20775 NZ_CP010441.1 Protein Homology CDS 4175858 4177327 . - 0 ID=cds4036;Parent=gene4143;Dbxref=Genbank:WP_000107576.1;Name=WP_000107576.1;gbkey=CDS;product=general secretory pathway protein;protein_id=WP_000107576.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4177507 4178322 . + . ID=gene4144;Name=SH03_RS20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20770;old_locus_tag=SH03_20780 NZ_CP010441.1 Protein Homology CDS 4177507 4178322 . + 0 ID=cds4037;Parent=gene4144;Dbxref=Genbank:WP_001142708.1;Name=WP_001142708.1;gbkey=CDS;product=type II secretion system protein GspC;protein_id=WP_001142708.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4178306 4180258 . + . ID=gene4145;Name=SH03_RS20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20775;old_locus_tag=SH03_20785 NZ_CP010441.1 Protein Homology CDS 4178306 4180258 . + 0 ID=cds4038;Parent=gene4145;Dbxref=Genbank:WP_001326512.1;Name=WP_001326512.1;gbkey=CDS;product=type II secretion system protein GspD;protein_id=WP_001326512.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4180268 4181749 . + . ID=gene4146;Name=SH03_RS20780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20780;old_locus_tag=SH03_20790 NZ_CP010441.1 Protein Homology CDS 4180268 4181749 . + 0 ID=cds4039;Parent=gene4146;Dbxref=Genbank:WP_001219894.1;Name=WP_001219894.1;gbkey=CDS;product=type II secretion system protein GspE;protein_id=WP_001219894.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4181746 4182942 . + . ID=gene4147;Name=SH03_RS20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20785;old_locus_tag=SH03_20795 NZ_CP010441.1 Protein Homology CDS 4181746 4182942 . + 0 ID=cds4040;Parent=gene4147;Dbxref=Genbank:WP_001109573.1;Name=WP_001109573.1;gbkey=CDS;product=type II secretion system protein GspF;protein_id=WP_001109573.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4182952 4183389 . + . ID=gene4148;Name=SH03_RS20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20790;old_locus_tag=SH03_20800 NZ_CP010441.1 Protein Homology CDS 4182952 4183389 . + 0 ID=cds4041;Parent=gene4148;Dbxref=Genbank:WP_001202874.1;Name=WP_001202874.1;gbkey=CDS;product=type II secretion system protein GspG;protein_id=WP_001202874.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4183397 4183906 . + . ID=gene4149;Name=SH03_RS20795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20795;old_locus_tag=SH03_20805 NZ_CP010441.1 Protein Homology CDS 4183397 4183906 . + 0 ID=cds4042;Parent=gene4149;Dbxref=Genbank:WP_001076046.1;Name=WP_001076046.1;gbkey=CDS;product=type II secretion system protein GspH;protein_id=WP_001076046.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4183903 4184280 . + . ID=gene4150;Name=SH03_RS20800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20800;old_locus_tag=SH03_20810 NZ_CP010441.1 Protein Homology CDS 4183903 4184280 . + 0 ID=cds4043;Parent=gene4150;Dbxref=Genbank:WP_001041743.1;Name=WP_001041743.1;gbkey=CDS;product=type II secretion system protein GspI;protein_id=WP_001041743.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4184273 4184860 . + . ID=gene4151;Name=SH03_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20805;old_locus_tag=SH03_20815 NZ_CP010441.1 Protein Homology CDS 4184273 4184860 . + 0 ID=cds4044;Parent=gene4151;Dbxref=Genbank:WP_000610634.1;Name=WP_000610634.1;gbkey=CDS;product=general secretion pathway protein;protein_id=WP_000610634.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4184853 4185836 . + . ID=gene4152;Name=SH03_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20810;old_locus_tag=SH03_20820 NZ_CP010441.1 Protein Homology CDS 4184853 4185836 . + 0 ID=cds4045;Parent=gene4152;Dbxref=Genbank:WP_001058522.1;Name=WP_001058522.1;gbkey=CDS;product=general secretory pathway protein;protein_id=WP_001058522.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4185851 4187014 . + . ID=gene4153;Name=SH03_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20815;old_locus_tag=SH03_20825 NZ_CP010441.1 Protein Homology CDS 4185851 4187014 . + 0 ID=cds4046;Parent=gene4153;Dbxref=Genbank:WP_001115238.1;Name=WP_001115238.1;gbkey=CDS;product=type II secretion system protein GspL;protein_id=WP_001115238.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4187011 4187472 . + . ID=gene4154;Name=SH03_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20820;old_locus_tag=SH03_20830 NZ_CP010441.1 Protein Homology CDS 4187011 4187472 . + 0 ID=cds4047;Parent=gene4154;Dbxref=Genbank:WP_001295161.1;Name=WP_001295161.1;gbkey=CDS;product=general secretion pathway protein GspM;protein_id=WP_001295161.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4187472 4188149 . + . ID=gene4155;Name=SH03_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20825;old_locus_tag=SH03_20835 NZ_CP010441.1 Protein Homology CDS 4187472 4188149 . + 0 ID=cds4048;Parent=gene4155;Dbxref=Genbank:WP_000178154.1;Name=WP_000178154.1;gbkey=CDS;product=type 4 prepilin-like proteins leader peptide-processing enzyme;protein_id=WP_000178154.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4188178 4188654 . - . ID=gene4156;Name=SH03_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20830;old_locus_tag=SH03_20840 NZ_CP010441.1 Protein Homology CDS 4188178 4188654 . - 0 ID=cds4049;Parent=gene4156;Dbxref=Genbank:WP_000675504.1;Name=WP_000675504.1;Note=iron storage protein;gbkey=CDS;product=bacterioferritin;protein_id=WP_000675504.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4188726 4188920 . - . ID=gene4157;Name=SH03_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20835;old_locus_tag=SH03_20845 NZ_CP010441.1 Protein Homology CDS 4188726 4188920 . - 0 ID=cds4050;Parent=gene4157;Dbxref=Genbank:WP_000289085.1;Name=WP_000289085.1;gbkey=CDS;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289085.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4189089 4191782 . - . ID=gene4158;Name=SH03_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20840;old_locus_tag=SH03_20850 NZ_CP010441.1 Protein Homology CDS 4189089 4191782 . - 0 ID=cds4051;Parent=gene4158;Dbxref=Genbank:WP_000773156.1;Name=WP_000773156.1;gbkey=CDS;product=bifunctional chitinase/lysozyme;protein_id=WP_000773156.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 4192072 4193257 . + . ID=id223;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 4192074 4193258 . - . ID=gene4159;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=SH03_RS20845;old_locus_tag=SH03_20855 NZ_CP010441.1 Protein Homology CDS 4192074 4193258 . - 0 ID=cds4052;Parent=gene4159;Dbxref=Genbank:WP_000031783.1;Name=WP_000031783.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;product=translation elongation factor EF-Tu 1;protein_id=WP_000031783.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4193329 4195443 . - . ID=gene4160;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=SH03_RS20850;old_locus_tag=SH03_20860 NZ_CP010441.1 Protein Homology CDS 4193329 4195443 . - 0 ID=cds4053;Parent=gene4160;Dbxref=Genbank:WP_000124700.1;Name=WP_000124700.1;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;gbkey=CDS;gene=fusA;product=elongation factor G;protein_id=WP_000124700.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4195471 4196010 . - . ID=gene4161;Name=SH03_RS20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20855;old_locus_tag=SH03_20865 NZ_CP010441.1 Protein Homology CDS 4195471 4196010 . - 0 ID=cds4054;Parent=gene4161;Dbxref=Genbank:WP_001138045.1;Name=WP_001138045.1;gbkey=CDS;product=30S ribosomal protein S7;protein_id=WP_001138045.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4196107 4196481 . - . ID=gene4162;Name=SH03_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20860;old_locus_tag=SH03_20870 NZ_CP010441.1 Protein Homology CDS 4196107 4196481 . - 0 ID=cds4055;Parent=gene4162;Dbxref=Genbank:WP_038432674.1;Name=WP_038432674.1;gbkey=CDS;product=30S ribosomal protein S12;protein_id=WP_038432674.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4196607 4196894 . - . ID=gene4163;Name=SH03_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20865;old_locus_tag=SH03_20875 NZ_CP010441.1 Protein Homology CDS 4196607 4196894 . - 0 ID=cds4056;Parent=gene4163;Dbxref=Genbank:WP_000903373.1;Name=WP_000903373.1;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;gbkey=CDS;product=protein TusB;protein_id=WP_000903373.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4196902 4197261 . - . ID=gene4164;Name=SH03_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20870;old_locus_tag=SH03_20880 NZ_CP010441.1 Protein Homology CDS 4196902 4197261 . - 0 ID=cds4057;Parent=gene4164;Dbxref=Genbank:WP_000820714.1;Name=WP_000820714.1;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur transfer that results in thiouridation to U34 position in some tRNAs;gbkey=CDS;product=protein TusC;protein_id=WP_000820714.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4197261 4197647 . - . ID=gene4165;Name=SH03_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20875;old_locus_tag=SH03_20885 NZ_CP010441.1 Protein Homology CDS 4197261 4197647 . - 0 ID=cds4058;Parent=gene4165;Dbxref=Genbank:WP_001209680.1;Name=WP_001209680.1;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;gbkey=CDS;product=sulfurtransferase TusD;protein_id=WP_001209680.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4197647 4198369 . - . ID=gene4166;Name=SH03_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20880;old_locus_tag=SH03_20890 NZ_CP010441.1 Protein Homology CDS 4197647 4198369 . - 0 ID=cds4059;Parent=gene4166;Dbxref=Genbank:WP_000091466.1;Name=WP_000091466.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000091466.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4198536 4199348 . - . ID=gene4167;Name=SH03_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20885;old_locus_tag=SH03_20895 NZ_CP010441.1 Protein Homology CDS 4198536 4199348 . - 0 ID=cds4060;Parent=gene4167;Dbxref=Genbank:WP_000838250.1;Name=WP_000838250.1;Note=rotamase;gbkey=CDS;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000838250.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4199569 4199787 . + . ID=gene4168;Name=SH03_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20890;old_locus_tag=SH03_20900 NZ_CP010441.1 Protein Homology CDS 4199569 4199787 . + 0 ID=cds4061;Parent=gene4168;Dbxref=Genbank:WP_001153615.1;Name=WP_001153615.1;Note=required for phi X174 lysis;gbkey=CDS;product=protein SlyX;protein_id=WP_001153615.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4199836 4200426 . - . ID=gene4169;Name=SH03_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20895;old_locus_tag=SH03_20905 NZ_CP010441.1 Protein Homology CDS 4199836 4200426 . - 0 ID=cds4062;Parent=gene4169;Dbxref=Genbank:WP_000861334.1;Name=WP_000861334.1;Note=rotamase;gbkey=CDS;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000861334.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4200521 4200721 . - . ID=gene4170;Name=SH03_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20900;old_locus_tag=SH03_20910 NZ_CP010441.1 Protein Homology CDS 4200521 4200721 . - 0 ID=cds4063;Parent=gene4170;Dbxref=Genbank:WP_001007730.1;Name=WP_001007730.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001007730.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4200731 4202536 . - . ID=gene4171;Name=SH03_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20905;old_locus_tag=SH03_20915 NZ_CP010441.1 Protein Homology CDS 4200731 4202536 . - 0 ID=cds4064;Parent=gene4171;Dbxref=Genbank:WP_000399147.1;Name=WP_000399147.1;Note=involved in potassium efflux;gbkey=CDS;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_000399147.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4202536 4203087 . - . ID=gene4172;Name=SH03_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20910;old_locus_tag=SH03_20920 NZ_CP010441.1 Protein Homology CDS 4202536 4203087 . - 0 ID=cds4065;Parent=gene4172;Dbxref=Genbank:WP_001297514.1;Name=WP_001297514.1;Note=required for KefB activity;gbkey=CDS;product=potassium transporter;protein_id=WP_001297514.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4203218 4205131 . + . ID=gene4173;Name=SH03_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20915;old_locus_tag=SH03_20925 NZ_CP010441.1 Protein Homology CDS 4203218 4205131 . + 0 ID=cds4066;Parent=gene4173;Dbxref=Genbank:WP_000634798.1;Name=WP_000634798.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_000634798.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4205131 4206153 . + . ID=gene4174;Name=SH03_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20920;old_locus_tag=SH03_20930 NZ_CP010441.1 Protein Homology CDS 4205131 4206153 . + 0 ID=cds4067;Parent=gene4174;Dbxref=Genbank:WP_000057356.1;Name=WP_000057356.1;gbkey=CDS;product=UPF0017 family hydrolase;protein_id=WP_000057356.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4206147 4206365 . + . ID=gene4175;Name=SH03_RS20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20925;old_locus_tag=SH03_20935 NZ_CP010441.1 Protein Homology CDS 4206147 4206365 . + 0 ID=cds4068;Parent=gene4175;Dbxref=Genbank:WP_000907085.1;Name=WP_000907085.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000907085.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4206419 4207288 . + . ID=gene4176;Name=SH03_RS20930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20930;old_locus_tag=SH03_20940 NZ_CP010441.1 Protein Homology CDS 4206419 4207288 . + 0 ID=cds4069;Parent=gene4176;Dbxref=Genbank:WP_001274680.1;Name=WP_001274680.1;gbkey=CDS;product=phosphoribulokinase;protein_id=WP_001274680.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4207343 4207747 . - . ID=gene4177;Name=SH03_RS20935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20935;old_locus_tag=SH03_20945 NZ_CP010441.1 Protein Homology CDS 4207343 4207747 . - 0 ID=cds4070;Parent=gene4177;Dbxref=Genbank:WP_001148908.1;Name=WP_001148908.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001148908.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4207827 4208042 . + . ID=gene4178;Name=SH03_RS20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20940;old_locus_tag=SH03_20950 NZ_CP010441.1 Protein Homology CDS 4207827 4208042 . + 0 ID=cds4071;Parent=gene4178;Dbxref=Genbank:WP_001303699.1;Name=WP_001303699.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001303699.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4208049 4208681 . + . ID=gene4179;Name=SH03_RS20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20945;old_locus_tag=SH03_20955 NZ_CP010441.1 Protein Homology CDS 4208049 4208681 . + 0 ID=cds4072;Parent=gene4179;Dbxref=Genbank:WP_000242755.1;Name=WP_000242755.1;Note=cAMP receptor protein%3B complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons;gbkey=CDS;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242755.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4208732 4210822 . + . ID=gene4180;Name=SH03_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20950;old_locus_tag=SH03_20960 NZ_CP010441.1 Protein Homology CDS 4208732 4210822 . + 0 ID=cds4073;Parent=gene4180;Dbxref=Genbank:WP_021553919.1;Name=WP_021553919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_021553919.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4210889 4212109 . - . ID=gene4181;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;locus_tag=SH03_RS20955;old_locus_tag=SH03_20965 NZ_CP010441.1 Protein Homology CDS 4210889 4212109 . - 0 ID=cds4074;Parent=gene4181;Dbxref=Genbank:WP_000963792.1;Name=WP_000963792.1;Note=DapATase%3B bifunctional enzyme that functions in arginine and lysine biosynthetic pathways%3B catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2%2C6-diaminoheptanedioate;gbkey=CDS;gene=argD;product=acetylornithine aminotransferase;protein_id=WP_000963792.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4212195 4212758 . - . ID=gene4182;Name=SH03_RS20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20960;old_locus_tag=SH03_20970 NZ_CP010441.1 Protein Homology CDS 4212195 4212758 . - 0 ID=cds4075;Parent=gene4182;Dbxref=Genbank:WP_000601847.1;Name=WP_000601847.1;Note=TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity;gbkey=CDS;product=aminodeoxychorismate synthase;protein_id=WP_000601847.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4212790 4213392 . - . ID=gene4183;Name=SH03_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20965;old_locus_tag=SH03_20975 NZ_CP010441.1 Protein Homology CDS 4212790 4213392 . - 0 ID=cds4076;Parent=gene4183;Dbxref=Genbank:WP_001280641.1;Name=WP_001280641.1;gbkey=CDS;product=adenosine monophosphate-protein transferase;protein_id=WP_001280641.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4213382 4213549 . - . ID=gene4184;Name=SH03_RS20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20970;old_locus_tag=SH03_20980 NZ_CP010441.1 Protein Homology CDS 4213382 4213549 . - 0 ID=cds4077;Parent=gene4184;Dbxref=Genbank:WP_000736862.1;Name=WP_000736862.1;gbkey=CDS;product=antitoxin;protein_id=WP_000736862.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4213654 4214226 . - . ID=gene4185;Name=SH03_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20975;old_locus_tag=SH03_20985 NZ_CP010441.1 Protein Homology CDS 4213654 4214226 . - 0 ID=cds4078;Parent=gene4185;Dbxref=Genbank:WP_000477225.1;Name=WP_000477225.1;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_000477225.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4214497 4215678 . + . ID=gene4186;Name=SH03_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20980;old_locus_tag=SH03_20990 NZ_CP010441.1 Protein Homology CDS 4214497 4215678 . + 0 ID=cds4079;Parent=gene4186;Dbxref=Genbank:WP_000185247.1;Name=WP_000185247.1;gbkey=CDS;product=protein TsgA;protein_id=WP_000185247.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4215940 4218483 . + . ID=gene4187;Name=SH03_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20985;old_locus_tag=SH03_20995 NZ_CP010441.1 Protein Homology CDS 4215940 4218483 . + 0 ID=cds4080;Parent=gene4187;Dbxref=Genbank:WP_000049208.1;Name=WP_000049208.1;gbkey=CDS;product=nitrite reductase (NADH) large subunit;protein_id=WP_000049208.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4218480 4218806 . + . ID=gene4188;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=SH03_RS20990;old_locus_tag=SH03_21000 NZ_CP010441.1 Protein Homology CDS 4218480 4218806 . + 0 ID=cds4081;Parent=gene4188;Dbxref=Genbank:WP_000084764.1;Name=WP_000084764.1;Note=involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+%3B bounds to NirB%2C the cytoplasmic subunit%2C whose expression is induced at high nitrate concentrations;gbkey=CDS;gene=nirD;product=nitrite reductase (NADH) small subunit;protein_id=WP_000084764.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4218932 4219738 . + . ID=gene4189;Name=SH03_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS20995;old_locus_tag=SH03_21005 NZ_CP010441.1 Protein Homology CDS 4218932 4219738 . + 0 ID=cds4082;Parent=gene4189;Dbxref=Genbank:WP_000493556.1;Name=WP_000493556.1;Note=member of the FNT family of formate and nitrite transporters;gbkey=CDS;product=nitrite transporter NirC;protein_id=WP_000493556.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4219757 4221130 . + . ID=gene4190;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=SH03_RS21000;old_locus_tag=SH03_21010 NZ_CP010441.1 Protein Homology CDS 4219757 4221130 . + 0 ID=cds4083;Parent=gene4190;Dbxref=Genbank:WP_000349855.1;Name=WP_000349855.1;Note=multifunction enzyme consisting of uroporphyrin-III C-methyltransferase%2C precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase%3B catalyzes the methylation of uroporphyrinogen III to form precorrin-2%2C then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin;gbkey=CDS;gene=cysG;product=siroheme synthase;protein_id=WP_000349855.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4221377 4221544 . + . ID=gene4191;Name=SH03_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21005;old_locus_tag=SH03_21015 NZ_CP010441.1 Protein Homology CDS 4221377 4221544 . + 0 ID=cds4084;Parent=gene4191;Dbxref=Genbank:WP_001031834.1;Name=WP_001031834.1;gbkey=CDS;product=lipoprotein;protein_id=WP_001031834.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4221839 4223176 . + . ID=gene4192;Name=frlA;gbkey=Gene;gene=frlA;gene_biotype=protein_coding;locus_tag=SH03_RS21010;old_locus_tag=SH03_21020 NZ_CP010441.1 Protein Homology CDS 4221839 4223176 . + 0 ID=cds4085;Parent=gene4192;Dbxref=Genbank:WP_000535505.1;Name=WP_000535505.1;Note=inner membrane protein possibly involved in fructoselysine transport%3B member of the flr operon;gbkey=CDS;gene=frlA;product=fructoselysine transporter;protein_id=WP_000535505.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4223197 4224219 . + . ID=gene4193;Name=frlB;gbkey=Gene;gene=frlB;gene_biotype=protein_coding;locus_tag=SH03_RS21015;old_locus_tag=SH03_21025 NZ_CP010441.1 Protein Homology CDS 4223197 4224219 . + 0 ID=cds4086;Parent=gene4193;Dbxref=Genbank:WP_001295163.1;Name=WP_001295163.1;Note=catalyzes the conversion of fructoselysine 6-phosphate to glucose 6-phosphate and lysine;gbkey=CDS;gene=frlB;product=fructoselysine 6-phosphate deglycase;protein_id=WP_001295163.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4224269 4225099 . + . ID=gene4194;Name=SH03_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21020;old_locus_tag=SH03_21030 NZ_CP010441.1 Protein Homology CDS 4224269 4225099 . + 0 ID=cds4087;Parent=gene4194;Dbxref=Genbank:WP_000847837.1;Name=WP_000847837.1;Note=YhfOP%3B YhfP%3B YhfO%3B FrlC%3B catalyzes the interconversion of fructoselysine and psicoselysine;gbkey=CDS;product=protein FrlC;protein_id=WP_000847837.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4225096 4225881 . + . ID=gene4195;Name=SH03_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21025;old_locus_tag=SH03_21035 NZ_CP010441.1 Protein Homology CDS 4225096 4225881 . + 0 ID=cds4088;Parent=gene4195;Dbxref=Genbank:WP_000853353.1;Name=WP_000853353.1;gbkey=CDS;product=fructoselysine kinase;protein_id=WP_000853353.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4225981 4226712 . + . ID=gene4196;Name=SH03_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21030;old_locus_tag=SH03_21040 NZ_CP010441.1 Protein Homology CDS 4225981 4226712 . + 0 ID=cds4089;Parent=gene4196;Dbxref=Genbank:WP_001276847.1;Name=WP_001276847.1;Note=may act as a transcriptional regulator of a putative fructoselysine-induced operon containing the yhfM%2C yhfN%2C yhfO%2C yhfP%2C yhfQ%2C and yhfR genes;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001276847.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4226864 4227949 . - . ID=gene4197;Name=SH03_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21035;old_locus_tag=SH03_21045 NZ_CP010441.1 Protein Homology CDS 4226864 4227949 . - 0 ID=cds4090;Parent=gene4197;Dbxref=Genbank:WP_000847144.1;Name=WP_000847144.1;gbkey=CDS;product=FNR-regulated pyridoxal phosphate-dependent aminotransferase;protein_id=WP_000847144.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4227961 4229265 . - . ID=gene4198;Name=SH03_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21040;old_locus_tag=SH03_21050 NZ_CP010441.1 Protein Homology CDS 4227961 4229265 . - 0 ID=cds4091;Parent=gene4198;Dbxref=Genbank:WP_000366857.1;Name=WP_000366857.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000366857.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4229277 4229630 . - . ID=gene4199;Name=SH03_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21045;old_locus_tag=SH03_21055 NZ_CP010441.1 Protein Homology CDS 4229277 4229630 . - 0 ID=cds4092;Parent=gene4199;Dbxref=Genbank:WP_000719728.1;Name=WP_000719728.1;gbkey=CDS;product=DUF2620 domain-containing protein;protein_id=WP_000719728.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4229641 4230519 . - . ID=gene4200;Name=SH03_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21050;old_locus_tag=SH03_21060 NZ_CP010441.1 Protein Homology CDS 4229641 4230519 . - 0 ID=cds4093;Parent=gene4200;Dbxref=Genbank:WP_000007010.1;Name=WP_000007010.1;Note=phosphotriesterase homology protein%3B PhP%3B YhfV%3B member of a family of proteins related to phosphotriesterase (PTE);gbkey=CDS;product=phosphotriesterase homology protein;protein_id=WP_000007010.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4230516 4231742 . - . ID=gene4201;Name=SH03_RS21055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21055;old_locus_tag=SH03_21065 NZ_CP010441.1 Protein Homology CDS 4230516 4231742 . - 0 ID=cds4094;Parent=gene4201;Dbxref=Genbank:WP_000090644.1;Name=WP_000090644.1;gbkey=CDS;product=phosphopentomutase-related metalloenzyme superfamily protein;protein_id=WP_000090644.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4231742 4232905 . - . ID=gene4202;Name=SH03_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21060;old_locus_tag=SH03_21070 NZ_CP010441.1 Protein Homology CDS 4231742 4232905 . - 0 ID=cds4095;Parent=gene4202;Dbxref=Genbank:WP_000497334.1;Name=WP_000497334.1;gbkey=CDS;product=pyridoxal 5''-phosphate binding protein;protein_id=WP_000497334.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4232989 4233351 . - . ID=gene4203;Name=SH03_RS21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21065;old_locus_tag=SH03_21075 NZ_CP010441.1 Protein Homology CDS 4232989 4233351 . - 0 ID=cds4096;Parent=gene4203;Dbxref=Genbank:WP_001295165.1;Name=WP_001295165.1;gbkey=CDS;product=PRD domain protein;protein_id=WP_001295165.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4233368 4234273 . - . ID=gene4204;Name=SH03_RS21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21070;old_locus_tag=SH03_21080 NZ_CP010441.1 Protein Homology CDS 4233368 4234273 . - 0 ID=cds4097;Parent=gene4204;Dbxref=Genbank:WP_001254790.1;Name=WP_001254790.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001254790.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4234563 4235567 . - . ID=gene4205;Name=SH03_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21075;old_locus_tag=SH03_21085 NZ_CP010441.1 Protein Homology CDS 4234563 4235567 . - 0 ID=cds4098;Parent=gene4205;Dbxref=Genbank:WP_000165552.1;Name=WP_000165552.1;gbkey=CDS;product=tryptophan--tRNA ligase;protein_id=WP_000165552.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4235560 4236318 . - . ID=gene4206;Name=SH03_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21080;old_locus_tag=SH03_21090 NZ_CP010441.1 Protein Homology CDS 4235560 4236318 . - 0 ID=cds4099;Parent=gene4206;Dbxref=Genbank:WP_001031729.1;Name=WP_001031729.1;Note=catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate;gbkey=CDS;product=phosphoglycolate phosphatase;protein_id=WP_001031729.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4236311 4236988 . - . ID=gene4207;Name=SH03_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21085;old_locus_tag=SH03_21095 NZ_CP010441.1 Protein Homology CDS 4236311 4236988 . - 0 ID=cds4100;Parent=gene4207;Dbxref=Genbank:WP_000816280.1;Name=WP_000816280.1;gbkey=CDS;product=ribulose-phosphate 3-epimerase;protein_id=WP_000816280.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4237006 4237842 . - . ID=gene4208;Name=SH03_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21090;old_locus_tag=SH03_21100 NZ_CP010441.1 Protein Homology CDS 4237006 4237842 . - 0 ID=cds4101;Parent=gene4208;Dbxref=Genbank:WP_000742143.1;Name=WP_000742143.1;gbkey=CDS;product=DNA adenine methylase;protein_id=WP_000742143.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4237949 4239235 . - . ID=gene4209;Name=SH03_RS21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21095;old_locus_tag=SH03_21105 NZ_CP010441.1 Protein Homology CDS 4237949 4239235 . - 0 ID=cds4102;Parent=gene4209;Dbxref=Genbank:WP_000343215.1;Name=WP_000343215.1;Note=binds the septal ring;gbkey=CDS;product=protein DamX;protein_id=WP_000343215.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4239327 4240415 . - . ID=gene4210;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=SH03_RS21100;old_locus_tag=SH03_21110 NZ_CP010441.1 Protein Homology CDS 4239327 4240415 . - 0 ID=cds4103;Parent=gene4210;Dbxref=Genbank:WP_000439848.1;Name=WP_000439848.1;Note=catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroB;product=3-dehydroquinate synthase;protein_id=WP_000439848.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4240472 4240993 . - . ID=gene4211;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=SH03_RS21105;old_locus_tag=SH03_21115 NZ_CP010441.1 Protein Homology CDS 4240472 4240993 . - 0 ID=cds4104;Parent=gene4211;Dbxref=Genbank:WP_000818618.1;Name=WP_000818618.1;Note=type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroK;product=shikimate kinase;protein_id=WP_000818618.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4241394 4242554 . - . ID=gene4212;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=SH03_RS21110;old_locus_tag=SH03_21120 NZ_CP010441.1 Protein Homology CDS 4241394 4242554 . - 0 ID=cds4105;Parent=gene4212;Dbxref=Genbank:WP_001325235.1;Name=WP_001325235.1;Note=outer membrane porin probably involved in uptake of extracellular double-stranded DNA%3B similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa;gbkey=CDS;gene=hofQ;product=porin;protein_id=WP_001325235.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4242544 4242948 . - . ID=gene4213;Name=SH03_RS21115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21115;old_locus_tag=SH03_21125 NZ_CP010441.1 Protein Homology CDS 4242544 4242948 . - 0 ID=cds4106;Parent=gene4213;Dbxref=Genbank:WP_001264141.1;Name=WP_001264141.1;gbkey=CDS;product=DNA catabolic protein;protein_id=WP_001264141.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4242938 4243378 . - . ID=gene4214;Name=SH03_RS21120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21120;old_locus_tag=SH03_21130 NZ_CP010441.1 Protein Homology CDS 4242938 4243378 . - 0 ID=cds4107;Parent=gene4214;Dbxref=Genbank:WP_001055759.1;Name=WP_001055759.1;gbkey=CDS;product=DNA catabolic protein;protein_id=WP_001055759.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4243362 4243901 . - . ID=gene4215;Name=SH03_RS21125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21125;old_locus_tag=SH03_21135 NZ_CP010441.1 Protein Homology CDS 4243362 4243901 . - 0 ID=cds4108;Parent=gene4215;Dbxref=Genbank:WP_001069315.1;Name=WP_001069315.1;gbkey=CDS;product=DNA utilization protein HofN;protein_id=WP_001069315.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4243901 4244680 . - . ID=gene4216;Name=SH03_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21130;old_locus_tag=SH03_21140 NZ_CP010441.1 Protein Homology CDS 4243901 4244680 . - 0 ID=cds4109;Parent=gene4216;Dbxref=Genbank:WP_001295166.1;Name=WP_001295166.1;gbkey=CDS;product=DNA catabolic pilus assembly protein;protein_id=WP_001295166.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4244800 4247352 . + . ID=gene4217;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=SH03_RS21135;old_locus_tag=SH03_21145 NZ_CP010441.1 Protein Homology CDS 4244800 4247352 . + 0 ID=cds4110;Parent=gene4217;Dbxref=Genbank:WP_001336003.1;Name=WP_001336003.1;Note=bifunctional murein transglycosylase/murein transpeptidase%3B penicillin-binding protein 1A%3B involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation%3B penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits;gbkey=CDS;gene=mrcA;product=penicillin-binding protein 1A;protein_id=WP_001336003.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4247518 4248078 . - . ID=gene4218;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=SH03_RS21140;old_locus_tag=SH03_21150 NZ_CP010441.1 Protein Homology CDS 4247518 4248078 . - 0 ID=cds4111;Parent=gene4218;Dbxref=Genbank:WP_000045744.1;Name=WP_000045744.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudE;product=ADP compounds hydrolase NudE;protein_id=WP_000045744.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4248398 4250533 . + . ID=gene4219;Name=SH03_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21145;old_locus_tag=SH03_21155 NZ_CP010441.1 Protein Homology CDS 4248398 4250533 . + 0 ID=cds4112;Parent=gene4219;Dbxref=Genbank:WP_000104533.1;Name=WP_000104533.1;gbkey=CDS;product=RcsCDB-response attenuator%2C inner membrane protein;protein_id=WP_000104533.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4250598 4251266 . + . ID=gene4220;Name=SH03_RS21150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21150;old_locus_tag=SH03_21160 NZ_CP010441.1 Protein Homology CDS 4250598 4251266 . + 0 ID=cds4113;Parent=gene4220;Dbxref=Genbank:WP_001295168.1;Name=WP_001295168.1;gbkey=CDS;product=GMP/IMP nucleotidase YrfG;protein_id=WP_001295168.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4251277 4251678 . + . ID=gene4221;Name=SH03_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21155;old_locus_tag=SH03_21165 NZ_CP010441.1 Protein Homology CDS 4251277 4251678 . + 0 ID=cds4114;Parent=gene4221;Dbxref=Genbank:WP_000660483.1;Name=WP_000660483.1;gbkey=CDS;product=heat-shock protein 15;protein_id=WP_000660483.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4251703 4252581 . + . ID=gene4222;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=SH03_RS21160;old_locus_tag=SH03_21170 NZ_CP010441.1 Protein Homology CDS 4251703 4252581 . + 0 ID=cds4115;Parent=gene4222;Dbxref=Genbank:WP_001135574.1;Name=WP_001135574.1;Note=becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers;gbkey=CDS;gene=hslO;product=heat-shock protein Hsp33;protein_id=WP_001135574.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4252644 4254368 . - . ID=gene4223;Name=SH03_RS21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21165;old_locus_tag=SH03_21175 NZ_CP010441.1 Protein Homology CDS 4252644 4254368 . - 0 ID=cds4116;Parent=gene4223;Dbxref=Genbank:WP_000370879.1;Name=WP_000370879.1;gbkey=CDS;product=DUF4153 domain-containing protein;protein_id=WP_000370879.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4254444 4254575 . - . ID=gene4224;Name=SH03_RS21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21170;old_locus_tag=SH03_21180 NZ_CP010441.1 Protein Homology CDS 4254444 4254575 . - 0 ID=cds4117;Parent=gene4224;Dbxref=Genbank:WP_001303701.1;Name=WP_001303701.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001303701.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4254747 4256369 . + . ID=gene4225;Name=SH03_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21175;old_locus_tag=SH03_21185 NZ_CP010441.1 Protein Homology CDS 4254747 4256369 . + 0 ID=cds4118;Parent=gene4225;Dbxref=Genbank:WP_001265681.1;Name=WP_001265681.1;Note=PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP;gbkey=CDS;product=phosphoenolpyruvate carboxykinase [ATP];protein_id=WP_001265681.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4256445 4257797 . - . ID=gene4226;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;gene_synonym=ompB;locus_tag=SH03_RS21180;old_locus_tag=SH03_21190 NZ_CP010441.1 Protein Homology CDS 4256445 4257797 . - 0 ID=cds4119;Parent=gene4226;Dbxref=Genbank:WP_001253696.1;Name=WP_001253696.1;Note=membrane-localized osmosensor%3B histidine kinase%3B in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR;gbkey=CDS;gene=envZ;product=two-component system sensor histidine kinase;protein_id=WP_001253696.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4257794 4258513 . - . ID=gene4227;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=SH03_RS21185;old_locus_tag=SH03_21195 NZ_CP010441.1 Protein Homology CDS 4257794 4258513 . - 0 ID=cds4120;Parent=gene4227;Dbxref=Genbank:WP_001157751.1;Name=WP_001157751.1;Note=part of two-component system EnvZ/OmpR%3B regulates transcription of outer membrane porin genes ompC/F%3B under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR%3B the result is increased expression of ompC and repression of ompF%3B also functions in regulation of other genes%3B forms dimers upon phosphorylation;gbkey=CDS;gene=ompR;product=two-component system response regulator;protein_id=WP_001157751.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4258741 4259217 . + . ID=gene4228;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=SH03_RS21190;old_locus_tag=SH03_21200 NZ_CP010441.1 Protein Homology CDS 4258741 4259217 . + 0 ID=cds4121;Parent=gene4228;Dbxref=Genbank:WP_000856737.1;Name=WP_000856737.1;Note=necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus;gbkey=CDS;gene=greB;product=transcription elongation factor GreB;protein_id=WP_000856737.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4259314 4261635 . + . ID=gene4229;Name=SH03_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21195;old_locus_tag=SH03_21205 NZ_CP010441.1 Protein Homology CDS 4259314 4261635 . + 0 ID=cds4122;Parent=gene4229;Dbxref=Genbank:WP_000980727.1;Name=WP_000980727.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000980727.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4262092 4262319 . + . ID=gene4230;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=SH03_RS21200;old_locus_tag=SH03_21210 NZ_CP010441.1 Protein Homology CDS 4262092 4262319 . + 0 ID=cds4123;Parent=gene4230;Dbxref=Genbank:WP_001200455.1;Name=WP_001200455.1;gbkey=CDS;gene=feoA;product=ferrous iron transporter A;protein_id=WP_001200455.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4262336 4264657 . + . ID=gene4231;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=SH03_RS21205;old_locus_tag=SH03_21215 NZ_CP010441.1 Protein Homology CDS 4262336 4264657 . + 0 ID=cds4124;Parent=gene4231;Dbxref=Genbank:WP_000737039.1;Name=WP_000737039.1;Note=cytoplasmic membrane ferrous uptake system permease%3B mutations disrupt the ability of Escherichia coli to take up ferrous iron%3B GTP-binding protein which requires GTP for efficient iron(II) uptake;gbkey=CDS;gene=feoB;product=ferrous iron transporter B;protein_id=WP_000737039.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4264657 4264893 . + . ID=gene4232;Name=SH03_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21210;old_locus_tag=SH03_21220 NZ_CP010441.1 Protein Homology CDS 4264657 4264893 . + 0 ID=cds4125;Parent=gene4232;Dbxref=Genbank:WP_000157586.1;Name=WP_000157586.1;Note=regulatory protein that controls transcription of feoABC genes;gbkey=CDS;product=ferrous iron transporter C;protein_id=WP_000157586.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4265096 4265974 . + . ID=gene4233;Name=SH03_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21215;old_locus_tag=SH03_21225 NZ_CP010441.1 Protein Homology CDS 4265096 4265974 . + 0 ID=cds4126;Parent=gene4233;Dbxref=Genbank:WP_000039062.1;Name=WP_000039062.1;gbkey=CDS;product=transposase;protein_id=WP_000039062.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4266003 4266773 . - . ID=gene4234;Name=SH03_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21220;old_locus_tag=SH03_21230 NZ_CP010441.1 Protein Homology CDS 4266003 4266773 . - 0 ID=cds4127;Parent=gene4234;Dbxref=Genbank:WP_001060070.1;Name=WP_001060070.1;Note=Shows carboxylesterase activity with a preference for short chain fatty acid esters%3B involved in pimeloyl-CoA synthesis;gbkey=CDS;product=pimeloyl-[acyl-carrier protein] methyl ester esterase;protein_id=WP_001060070.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4266811 4267494 . + . ID=gene4235;Name=SH03_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21225;old_locus_tag=SH03_21235 NZ_CP010441.1 Protein Homology CDS 4266811 4267494 . + 0 ID=cds4128;Parent=gene4235;Dbxref=Genbank:WP_001333371.1;Name=WP_001333371.1;Note=required for utilization of DNA as the sole source of carbon and energy;gbkey=CDS;product=protein GntX;protein_id=WP_001333371.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4267553 4268128 . + . ID=gene4236;Name=SH03_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21230;old_locus_tag=SH03_21240 NZ_CP010441.1 Protein Homology CDS 4267553 4268128 . + 0 ID=cds4129;Parent=gene4236;Dbxref=Genbank:WP_000619389.1;Name=WP_000619389.1;Note=cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source;gbkey=CDS;product=fe/S biogenesis protein nfuA;protein_id=WP_000619389.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4268488 4269804 . + . ID=gene4237;Name=SH03_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21235;old_locus_tag=SH03_21245 NZ_CP010441.1 Protein Homology CDS 4268488 4269804 . + 0 ID=cds4130;Parent=gene4237;Dbxref=Genbank:WP_001131758.1;Name=WP_001131758.1;gbkey=CDS;product=gluconate transporter;protein_id=WP_001131758.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4269915 4271999 . - . ID=gene4238;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=SH03_RS21240;old_locus_tag=SH03_21250 NZ_CP010441.1 Protein Homology CDS 4269915 4271999 . - 0 ID=cds4131;Parent=gene4238;Dbxref=Genbank:WP_000444342.1;Name=WP_000444342.1;Note=amylomaltase%3B acts to release glucose from maltodextrins;gbkey=CDS;gene=malQ;product=4-alpha-glucanotransferase;protein_id=WP_000444342.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4272009 4274402 . - . ID=gene4239;Name=SH03_RS21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21245;old_locus_tag=SH03_21255 NZ_CP010441.1 Protein Homology CDS 4272009 4274402 . - 0 ID=cds4132;Parent=gene4239;Dbxref=Genbank:WP_000081909.1;Name=WP_000081909.1;gbkey=CDS;product=maltodextrin phosphorylase;protein_id=WP_000081909.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4275014 4277719 . + . ID=gene4240;Name=SH03_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21250;old_locus_tag=SH03_21260 NZ_CP010441.1 Protein Homology CDS 4275014 4277719 . + 0 ID=cds4133;Parent=gene4240;Dbxref=Genbank:WP_038432676.1;Name=WP_038432676.1;Note=Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides;gbkey=CDS;product=transcriptional regulator;protein_id=WP_038432676.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4277762 4278778 . - . ID=gene4241;Name=SH03_RS21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21255;old_locus_tag=SH03_21265 NZ_CP010441.1 Protein Homology CDS 4277762 4278778 . - 0 ID=cds4134;Parent=gene4241;Dbxref=Genbank:WP_001335950.1;Name=WP_001335950.1;Note=catalyzes the conversion of terminal3'-phosphate of RNA to the 2'%2C3'-cyclicphosphodiester;gbkey=CDS;product=RNA 3'-terminal phosphate cyclase;protein_id=WP_001335950.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4278782 4280008 . - . ID=gene4242;Name=SH03_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21260;old_locus_tag=SH03_21270 NZ_CP010441.1 Protein Homology CDS 4278782 4280008 . - 0 ID=cds4135;Parent=gene4242;Dbxref=Genbank:WP_001105504.1;Name=WP_001105504.1;gbkey=CDS;product=RNA-splicing ligase RtcB;protein_id=WP_001105504.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4280197 4281795 . + . ID=gene4243;Name=SH03_RS21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21265;old_locus_tag=SH03_21275 NZ_CP010441.1 Protein Homology CDS 4280197 4281795 . + 0 ID=cds4136;Parent=gene4243;Dbxref=Genbank:WP_001232948.1;Name=WP_001232948.1;Note=sigma 54-dependent%3B regulates genes involved in forming a 2'%2C3'-cyclic phosphodiester on RNA;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001232948.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4281777 4282535 . - . ID=gene4244;Name=SH03_RS21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21270;old_locus_tag=SH03_21280 NZ_CP010441.1 Protein Homology CDS 4281777 4282535 . - 0 ID=cds4137;Parent=gene4244;Dbxref=Genbank:WP_000815099.1;Name=WP_000815099.1;Note=represses the glpD%2C glpFK%2C glpTQ%2C and glpACB operons involved in glycerol-3-phosphate metabolism;gbkey=CDS;product=glycerol-3-phosphate regulon repressor;protein_id=WP_000815099.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4282552 4283382 . - . ID=gene4245;Name=SH03_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21275;old_locus_tag=SH03_21285 NZ_CP010441.1 Protein Homology CDS 4282552 4283382 . - 0 ID=cds4138;Parent=gene4245;Dbxref=Genbank:WP_000928723.1;Name=WP_000928723.1;Note=protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity;gbkey=CDS;product=rhomboid protease GlpG;protein_id=WP_000928723.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4283427 4283753 . - . ID=gene4246;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=SH03_RS21280;old_locus_tag=SH03_21290 NZ_CP010441.1 Protein Homology CDS 4283427 4283753 . - 0 ID=cds4139;Parent=gene4246;Dbxref=Genbank:WP_000371928.1;Name=WP_000371928.1;Note=belongs to rhodanese family%3B thiosulfate thiotransferase%3B in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency%3B contains an active site cysteine;gbkey=CDS;gene=glpE;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_000371928.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4283943 4285448 . + . ID=gene4247;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=SH03_RS21285;old_locus_tag=SH03_21295 NZ_CP010441.1 Protein Homology CDS 4283943 4285448 . + 0 ID=cds4140;Parent=gene4247;Dbxref=Genbank:WP_000448136.1;Name=WP_000448136.1;Note=in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions%3B anaerobic expression is repressed by the arcAB system%3B converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8%3B associates with the cytoplasmic membrane;gbkey=CDS;gene=glpD;product=aerobic glycerol-3-phosphate dehydrogenase;protein_id=WP_000448136.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4285654 4285845 . - . ID=gene4248;Name=SH03_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21290;old_locus_tag=SH03_21300 NZ_CP010441.1 Protein Homology CDS 4285654 4285845 . - 0 ID=cds4141;Parent=gene4248;Dbxref=Genbank:WP_001335952.1;Name=WP_001335952.1;gbkey=CDS;product=membrane protein;protein_id=WP_001335952.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4286064 4288511 . - . ID=gene4249;Name=SH03_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21295;old_locus_tag=SH03_21305 NZ_CP010441.1 Protein Homology CDS 4286064 4288511 . - 0 ID=cds4142;Parent=gene4249;Dbxref=Genbank:WP_000993449.1;Name=WP_000993449.1;gbkey=CDS;product=glycogen phosphorylase;protein_id=WP_000993449.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4288530 4289963 . - . ID=gene4250;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=SH03_RS21300;old_locus_tag=SH03_21310 NZ_CP010441.1 Protein Homology CDS 4288530 4289963 . - 0 ID=cds4143;Parent=gene4250;Dbxref=Genbank:WP_001197646.1;Name=WP_001197646.1;Note=catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose;gbkey=CDS;gene=glgA;product=glycogen synthase;protein_id=WP_001197646.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4289963 4291258 . - . ID=gene4251;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=SH03_RS21305;old_locus_tag=SH03_21315 NZ_CP010441.1 Protein Homology CDS 4289963 4291258 . - 0 ID=cds4144;Parent=gene4251;Dbxref=Genbank:WP_000253975.1;Name=WP_000253975.1;Note=catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate;gbkey=CDS;gene=glgC;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000253975.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4291276 4293249 . - . ID=gene4252;Name=SH03_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21310;old_locus_tag=SH03_21320 NZ_CP010441.1 Protein Homology CDS 4291276 4293249 . - 0 ID=cds4145;Parent=gene4252;Dbxref=Genbank:WP_000192523.1;Name=WP_000192523.1;Note=catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen;gbkey=CDS;product=glycogen debranching protein;protein_id=WP_000192523.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4293246 4295432 . - . ID=gene4253;Name=SH03_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21315;old_locus_tag=SH03_21325 NZ_CP010441.1 Protein Homology CDS 4293246 4295432 . - 0 ID=cds4146;Parent=gene4253;Dbxref=Genbank:WP_001283723.1;Name=WP_001283723.1;gbkey=CDS;product=1%2C4-alpha-glucan-branching protein;protein_id=WP_001283723.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4295705 4296808 . - . ID=gene4254;Name=SH03_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21320;old_locus_tag=SH03_21330 NZ_CP010441.1 Protein Homology CDS 4295705 4296808 . - 0 ID=cds4147;Parent=gene4254;Dbxref=Genbank:WP_000799956.1;Name=WP_000799956.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799956.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4297001 4297594 . + . ID=gene4255;Name=SH03_RS21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21325;old_locus_tag=SH03_21335 NZ_CP010441.1 Protein Homology CDS 4297001 4297594 . + 0 ID=cds4148;Parent=gene4255;Dbxref=Genbank:WP_001002544.1;Name=WP_001002544.1;gbkey=CDS;product=membrane protein;protein_id=WP_001002544.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4297651 4298991 . - . ID=gene4256;Name=SH03_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21330;old_locus_tag=SH03_21340 NZ_CP010441.1 Protein Homology CDS 4297651 4298991 . - 0 ID=cds4149;Parent=gene4256;Dbxref=Genbank:WP_000210111.1;Name=WP_000210111.1;gbkey=CDS;product=low-affinity gluconate transporter;protein_id=WP_000210111.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4298995 4299522 . - . ID=gene4257;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=SH03_RS21335;old_locus_tag=SH03_21345 NZ_CP010441.1 Protein Homology CDS 4298995 4299522 . - 0 ID=cds4150;Parent=gene4257;Dbxref=Genbank:WP_000108330.1;Name=WP_000108330.1;Note=thermoresistant%3B catalyzes the formation of 6-phospho-D-gluconate from gluconate;gbkey=CDS;gene=gntK;product=thermoresistant gluconokinase;protein_id=WP_000108330.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4299661 4300656 . - . ID=gene4258;Name=SH03_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21340;old_locus_tag=SH03_21350 NZ_CP010441.1 Protein Homology CDS 4299661 4300656 . - 0 ID=cds4151;Parent=gene4258;Dbxref=Genbank:WP_000730252.1;Name=WP_000730252.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_000730252.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4300880 4301575 . - . ID=gene4259;Name=SH03_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21345;old_locus_tag=SH03_21355 NZ_CP010441.1 Protein Homology CDS 4300880 4301575 . - 0 ID=cds4152;Parent=gene4259;Dbxref=Genbank:WP_000639811.1;Name=WP_000639811.1;gbkey=CDS;product=quercetin 2%2C3-dioxygenase;protein_id=WP_000639811.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4301698 4302735 . - . ID=gene4260;Name=SH03_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21350;old_locus_tag=SH03_21360 NZ_CP010441.1 Protein Homology CDS 4301698 4302735 . - 0 ID=cds4153;Parent=gene4260;Dbxref=Genbank:WP_000236293.1;Name=WP_000236293.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_000236293.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4303068 4303556 . + . ID=gene4261;Name=SH03_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21355;old_locus_tag=SH03_21365 NZ_CP010441.1 Protein Homology CDS 4303068 4303556 . + 0 ID=cds4154;Parent=gene4261;Dbxref=Genbank:WP_001295206.1;Name=WP_001295206.1;Note=YhhY%3B regulated by the fur regulator%3B unknown function;gbkey=CDS;product=aminoacyl nucleotide detoxifying acetyltransferase;protein_id=WP_001295206.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4303793 4304971 . + . ID=gene4262;Name=SH03_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21360;old_locus_tag=SH03_21370 NZ_CP010441.1 Protein Homology CDS 4303793 4304971 . + 0 ID=cds4155;Parent=gene4262;Dbxref=Genbank:WP_000065894.1;Name=WP_000065894.1;gbkey=CDS;product=colicin;protein_id=WP_000065894.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4304968 4305384 . + . ID=gene4263;Name=SH03_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21365;old_locus_tag=SH03_21375 NZ_CP010441.1 Protein Homology CDS 4304968 4305384 . + 0 ID=cds4156;Parent=gene4263;Dbxref=Genbank:WP_000988497.1;Name=WP_000988497.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000988497.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 4305357 4306129 . + . ID=id224;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 4305607 4306110 . + . ID=gene4264;Name=SH03_RS21370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21370;old_locus_tag=SH03_21380 NZ_CP010441.1 Protein Homology CDS 4305607 4306110 . + 0 ID=cds4157;Parent=gene4264;Dbxref=Genbank:WP_001119362.1;Name=WP_001119362.1;gbkey=CDS;product=transposase;protein_id=WP_001119362.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4306689 4306973 . + . ID=gene4265;Name=SH03_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21375;old_locus_tag=SH03_21385 NZ_CP010441.1 Protein Homology CDS 4306689 4306973 . + 0 ID=cds4158;Parent=gene4265;Dbxref=Genbank:WP_000634159.1;Name=WP_000634159.1;gbkey=CDS;product=heat-shock protein;protein_id=WP_000634159.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4307011 4308753 . - . ID=gene4266;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=SH03_RS21380;old_locus_tag=SH03_21390 NZ_CP010441.1 Protein Homology CDS 4307011 4308753 . - 0 ID=cds4159;Parent=gene4266;Dbxref=Genbank:WP_000595082.1;Name=WP_000595082.1;Note=periplasmic enzyme%3B post-translationally processed into two subunits which are required for wild-type enzyme activity%3B cleaves the gammaglutamyl linkages of compounds such as glutathione and transfer the gammaglutamyl group to other amino acids and peptides;gbkey=CDS;gene=ggt;product=gamma-glutamyltranspeptidase;protein_id=WP_000595082.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4308873 4309313 . + . ID=gene4267;Name=SH03_RS21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21385;old_locus_tag=SH03_21395 NZ_CP010441.1 Protein Homology CDS 4308873 4309313 . + 0 ID=cds4160;Parent=gene4267;Dbxref=Genbank:WP_000825996.1;Name=WP_000825996.1;gbkey=CDS;product=DUF2756 domain-containing protein;protein_id=WP_000825996.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4309300 4310043 . - . ID=gene4268;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=SH03_RS21390;old_locus_tag=SH03_21400 NZ_CP010441.1 Protein Homology CDS 4309300 4310043 . - 0 ID=cds4161;Parent=gene4268;Dbxref=Genbank:WP_000073623.1;Name=WP_000073623.1;Note=hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol%3B induced when cells are starved for inorganic phosphate;gbkey=CDS;gene=ugpQ;product=glycerophosphoryl diester phosphodiesterase;protein_id=WP_000073623.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4310040 4311110 . - . ID=gene4269;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=SH03_RS21395;old_locus_tag=SH03_21405 NZ_CP010441.1 Protein Homology CDS 4310040 4311110 . - 0 ID=cds4162;Parent=gene4269;Dbxref=Genbank:WP_000907792.1;Name=WP_000907792.1;Note=part of the UgpABCE glycerol-3-phosphate uptake system;gbkey=CDS;gene=ugpC;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_000907792.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4311112 4311957 . - . ID=gene4270;Name=SH03_RS21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21400;old_locus_tag=SH03_21410 NZ_CP010441.1 Protein Homology CDS 4311112 4311957 . - 0 ID=cds4163;Parent=gene4270;Dbxref=Genbank:WP_000572177.1;Name=WP_000572177.1;Note=with UgpABC is involved in uptake of glycerol-3-phosphate;gbkey=CDS;product=sn-glycerol 3-phosphate ABC transporter permease;protein_id=WP_000572177.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4311954 4312841 . - . ID=gene4271;Name=SH03_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21405;old_locus_tag=SH03_21415 NZ_CP010441.1 Protein Homology CDS 4311954 4312841 . - 0 ID=cds4164;Parent=gene4271;Dbxref=Genbank:WP_000099289.1;Name=WP_000099289.1;Note=with UgpEC is involved in the uptake of glycerol-3-phosphate;gbkey=CDS;product=sn-glycerol 3-phosphate ABC transporter permease;protein_id=WP_000099289.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4312939 4314255 . - . ID=gene4272;Name=SH03_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21410;old_locus_tag=SH03_21420 NZ_CP010441.1 Protein Homology CDS 4312939 4314255 . - 0 ID=cds4165;Parent=gene4272;Dbxref=Genbank:WP_000803190.1;Name=WP_000803190.1;Note=with UgpACE is involved in the uptake of glycerol-3-phosphate;gbkey=CDS;product=sn-glycerol-3-phosphate-binding periplasmic protein UgpB;protein_id=WP_000803190.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4314490 4314618 . - . ID=gene4273;Name=SH03_RS21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21415;old_locus_tag=SH03_21425 NZ_CP010441.1 Protein Homology CDS 4314490 4314618 . - 0 ID=cds4166;Parent=gene4273;Dbxref=Genbank:WP_001442981.1;Name=WP_001442981.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001442981.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4314654 4315367 . - . ID=gene4274;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=SH03_RS21420;old_locus_tag=SH03_21430 NZ_CP010441.1 Protein Homology CDS 4314654 4315367 . - 0 ID=cds4167;Parent=gene4274;Dbxref=Genbank:WP_000416891.1;Name=WP_000416891.1;Note=with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livF;product=branched-chain amino acid ABC transporter ATP-binding protein;protein_id=WP_000416891.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4315369 4316136 . - . ID=gene4275;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=SH03_RS21425;old_locus_tag=SH03_21435 NZ_CP010441.1 Protein Homology CDS 4315369 4316136 . - 0 ID=cds4168;Parent=gene4275;Dbxref=Genbank:WP_000082101.1;Name=WP_000082101.1;Note=Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livG;product=branched-chain amino acid ABC transporter ATP-binding protein;protein_id=WP_000082101.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4316133 4317410 . - . ID=gene4276;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=SH03_RS21430;old_locus_tag=SH03_21440 NZ_CP010441.1 Protein Homology CDS 4316133 4317410 . - 0 ID=cds4169;Parent=gene4276;Dbxref=Genbank:WP_000803813.1;Name=WP_000803813.1;Note=Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livM;product=branched-chain amino acid ABC transporter permease;protein_id=WP_000803813.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4317407 4318333 . - . ID=gene4277;Name=SH03_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21435;old_locus_tag=SH03_21445 NZ_CP010441.1 Protein Homology CDS 4317407 4318333 . - 0 ID=cds4170;Parent=gene4277;Dbxref=Genbank:WP_001295111.1;Name=WP_001295111.1;Note=LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter;gbkey=CDS;product=branched-chain amino acid ABC transporter permease;protein_id=WP_001295111.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4318381 4319490 . - . ID=gene4278;Name=SH03_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21440;old_locus_tag=SH03_21450 NZ_CP010441.1 Protein Homology CDS 4318381 4319490 . - 0 ID=cds4171;Parent=gene4278;Dbxref=Genbank:WP_000827696.1;Name=WP_000827696.1;Note=with LivFGHM is involved in the high affinity leucine transport;gbkey=CDS;product=leucine-specific-binding protein;protein_id=WP_000827696.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4319914 4320297 . + . ID=gene4279;Name=SH03_RS21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21445;old_locus_tag=SH03_21455 NZ_CP010441.1 Protein Homology CDS 4319914 4320297 . + 0 ID=cds4172;Parent=gene4279;Dbxref=Genbank:WP_000778768.1;Name=WP_000778768.1;gbkey=CDS;product=pantothenate synthesis PanD autocleavage accelerator;protein_id=WP_000778768.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4320307 4320429 . + . ID=gene4280;Name=SH03_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21450;old_locus_tag=SH03_21460 NZ_CP010441.1 Protein Homology CDS 4320307 4320429 . + 0 ID=cds4173;Parent=gene4280;Dbxref=Genbank:WP_001311188.1;Name=WP_001311188.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001311188.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4320485 4321603 . - . ID=gene4281;Name=SH03_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21455;old_locus_tag=SH03_21465 NZ_CP010441.1 Protein Homology CDS 4320485 4321603 . - 0 ID=cds4174;Parent=gene4281;Dbxref=Genbank:WP_001326754.1;Name=WP_001326754.1;Note=with LivFGHM is involved in the high affinity leucine transport;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_001326754.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4321859 4322713 . - . ID=gene4282;Name=SH03_RS21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21460;old_locus_tag=SH03_21470 NZ_CP010441.1 Protein Homology CDS 4321859 4322713 . - 0 ID=cds4175;Parent=gene4282;Dbxref=Genbank:WP_000130217.1;Name=WP_000130217.1;Note=binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters;gbkey=CDS;product=RNA polymerase sigma factor RpoH;protein_id=WP_000130217.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4322958 4324016 . - . ID=gene4283;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=SH03_RS21465;old_locus_tag=SH03_21475 NZ_CP010441.1 Protein Homology CDS 4322958 4324016 . - 0 ID=cds4176;Parent=gene4283;Dbxref=Genbank:WP_001042003.1;Name=WP_001042003.1;Note=ABC transporter%2C membrane protein;gbkey=CDS;gene=ftsX;product=cell division protein FtsX;protein_id=WP_001042003.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4324009 4324677 . - . ID=gene4284;Name=SH03_RS21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21470;old_locus_tag=SH03_21480 NZ_CP010441.1 Protein Homology CDS 4324009 4324677 . - 0 ID=cds4177;Parent=gene4284;Dbxref=Genbank:WP_000617723.1;Name=WP_000617723.1;Note=ATP-binding protein of an ATP-binding cassette transporter%3B when bound to FtsX%2C FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions;gbkey=CDS;product=cell division ATP-binding protein FtsE;protein_id=WP_000617723.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4324680 4326173 . - . ID=gene4285;Name=SH03_RS21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21475;old_locus_tag=SH03_21485 NZ_CP010441.1 Protein Homology CDS 4324680 4326173 . - 0 ID=cds4178;Parent=gene4285;Dbxref=Genbank:WP_001040654.1;Name=WP_001040654.1;Note=cell division protein%3B signal recognition protein receptor%3B functions in the targeting and insertion of membrane proteins;gbkey=CDS;product=signal recognition particle receptor FtsY;protein_id=WP_001040654.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4326323 4326919 . + . ID=gene4286;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=SH03_RS21480;old_locus_tag=SH03_21490 NZ_CP010441.1 Protein Homology CDS 4326323 4326919 . + 0 ID=cds4179;Parent=gene4286;Dbxref=Genbank:WP_000743193.1;Name=WP_000743193.1;Note=catalyzes the methylation of 16S rRNA at position G966;gbkey=CDS;gene=rsmD;product=ribosomal RNA small subunit methyltransferase D;protein_id=WP_000743193.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4326909 4327178 . + . ID=gene4287;Name=SH03_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21485;old_locus_tag=SH03_21495 NZ_CP010441.1 Protein Homology CDS 4326909 4327178 . + 0 ID=cds4180;Parent=gene4287;Dbxref=Genbank:WP_001311191.1;Name=WP_001311191.1;gbkey=CDS;product=DUF1145 domain-containing protein;protein_id=WP_001311191.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4327181 4327540 . - . ID=gene4288;Name=SH03_RS21490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21490;old_locus_tag=SH03_21500 NZ_CP010441.1 Protein Homology CDS 4327181 4327540 . - 0 ID=cds4181;Parent=gene4288;Dbxref=Genbank:WP_000042895.1;Name=WP_000042895.1;gbkey=CDS;product=DUF2500 domain-containing protein;protein_id=WP_000042895.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4327681 4328307 . + . ID=gene4289;Name=SH03_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21495;old_locus_tag=SH03_21505 NZ_CP010441.1 Protein Homology CDS 4327681 4328307 . + 0 ID=cds4182;Parent=gene4289;Dbxref=Genbank:WP_000964718.1;Name=WP_000964718.1;gbkey=CDS;product=membrane protein;protein_id=WP_000964718.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4328381 4330579 . + . ID=gene4290;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=SH03_RS21500;old_locus_tag=SH03_21510 NZ_CP010441.1 Protein Homology CDS 4328381 4330579 . + 0 ID=cds4183;Parent=gene4290;Dbxref=Genbank:WP_000106551.1;Name=WP_000106551.1;Note=P-type ATPase involved in the export of lead%2C cadmium%2C zinc and mercury;gbkey=CDS;gene=zntA;product=cadmium-transporting ATPase;protein_id=WP_000106551.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4330681 4330926 . - . ID=gene4291;Name=SH03_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21505;old_locus_tag=SH03_21515 NZ_CP010441.1 Protein Homology CDS 4330681 4330926 . - 0 ID=cds4184;Parent=gene4291;Dbxref=Genbank:WP_000130621.1;Name=WP_000130621.1;Note=TusA%3B transfers sulfur to TusBCD complex%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;product=sulfurtransferase TusA;protein_id=WP_000130621.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4331147 4331812 . + . ID=gene4292;Name=SH03_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21510;old_locus_tag=SH03_21520 NZ_CP010441.1 Protein Homology CDS 4331147 4331812 . + 0 ID=cds4185;Parent=gene4292;Dbxref=Genbank:WP_001100469.1;Name=WP_001100469.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001100469.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4331885 4332442 . + . ID=gene4293;Name=SH03_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21515;old_locus_tag=SH03_21525 NZ_CP010441.1 Protein Homology CDS 4331885 4332442 . + 0 ID=cds4186;Parent=gene4293;Dbxref=Genbank:WP_001245295.1;Name=WP_001245295.1;gbkey=CDS;product=protein DcrB;protein_id=WP_001245295.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4332446 4333663 . - . ID=gene4294;Name=SH03_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21520;old_locus_tag=SH03_21530 NZ_CP010441.1 Protein Homology CDS 4332446 4333663 . - 0 ID=cds4187;Parent=gene4294;Dbxref=Genbank:WP_001300943.1;Name=WP_001300943.1;gbkey=CDS;product=arabinose efflux transporter;protein_id=WP_001300943.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4333795 4334844 . + . ID=gene4295;Name=SH03_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21525;old_locus_tag=SH03_21535 NZ_CP010441.1 Protein Homology CDS 4333795 4334844 . + 0 ID=cds4188;Parent=gene4295;Dbxref=Genbank:WP_001300885.1;Name=WP_001300885.1;gbkey=CDS;product=pheromone autoinducer 2 transporter;protein_id=WP_001300885.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4334899 4335486 . + . ID=gene4296;Name=SH03_RS21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21530;old_locus_tag=SH03_21540 NZ_CP010441.1 Protein Homology CDS 4334899 4335486 . + 0 ID=cds4189;Parent=gene4296;Dbxref=Genbank:WP_000285774.1;Name=WP_000285774.1;gbkey=CDS;product=4'-phosphopantetheinyl transferase;protein_id=WP_000285774.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4335597 4337171 . + . ID=gene4297;Name=SH03_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21535;old_locus_tag=SH03_21545 NZ_CP010441.1 Protein Homology CDS 4335597 4337171 . + 0 ID=cds4190;Parent=gene4297;Dbxref=Genbank:WP_000953361.1;Name=WP_000953361.1;gbkey=CDS;product=nickel-binding periplasmic protein;protein_id=WP_000953361.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4337171 4338115 . + . ID=gene4298;Name=SH03_RS21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21540;old_locus_tag=SH03_21550 NZ_CP010441.1 Protein Homology CDS 4337171 4338115 . + 0 ID=cds4191;Parent=gene4298;Dbxref=Genbank:WP_000947068.1;Name=WP_000947068.1;Note=with NikACDE is involved in nickel transport into the cell;gbkey=CDS;product=nickel ABC transporter permease;protein_id=WP_000947068.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4338112 4338945 . + . ID=gene4299;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=SH03_RS21545;old_locus_tag=SH03_21555 NZ_CP010441.1 Protein Homology CDS 4338112 4338945 . + 0 ID=cds4192;Parent=gene4299;Dbxref=Genbank:WP_001008963.1;Name=WP_001008963.1;Note=with NikABDE is involved in nickel transport into the cell;gbkey=CDS;gene=nikC;product=nickel ABC transporter permease;protein_id=WP_001008963.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4338945 4339709 . + . ID=gene4300;Name=nikD;gbkey=Gene;gene=nikD;gene_biotype=protein_coding;locus_tag=SH03_RS21550;old_locus_tag=SH03_21560 NZ_CP010441.1 Protein Homology CDS 4338945 4339709 . + 0 ID=cds4193;Parent=gene4300;Dbxref=Genbank:WP_038432678.1;Name=WP_038432678.1;Note=with NikABCE is involved in nickel transport into the cell;gbkey=CDS;gene=nikD;product=nickel ABC transporter ATP-binding protein;protein_id=WP_038432678.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4339706 4340512 . + . ID=gene4301;Name=nikE;gbkey=Gene;gene=nikE;gene_biotype=protein_coding;locus_tag=SH03_RS21555;old_locus_tag=SH03_21565 NZ_CP010441.1 Protein Homology CDS 4339706 4340512 . + 0 ID=cds4194;Parent=gene4301;Dbxref=Genbank:WP_000173631.1;Name=WP_000173631.1;Note=with NikABCD is involved with nickel transport into the cell;gbkey=CDS;gene=nikE;product=nickel import ATP-binding protein NikE;protein_id=WP_000173631.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4340518 4340919 . + . ID=gene4302;Name=SH03_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21560;old_locus_tag=SH03_21570 NZ_CP010441.1 Protein Homology CDS 4340518 4340919 . + 0 ID=cds4195;Parent=gene4302;Dbxref=Genbank:WP_001190062.1;Name=WP_001190062.1;Note=Inhibits transcription at high concentrations of nickel;gbkey=CDS;product=nickel-responsive regulator;protein_id=WP_001190062.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 4341121 4344810 . + . ID=id225;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 4341122 4345357 . + . ID=gene4303;Name=SH03_RS21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21565;old_locus_tag=SH03_21575 NZ_CP010441.1 Protein Homology CDS 4341122 4345357 . + 0 ID=cds4196;Parent=gene4303;Dbxref=Genbank:WP_000015298.1;Name=WP_000015298.1;gbkey=CDS;product=RHS element protein;protein_id=WP_000015298.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4345329 4345712 . + . ID=gene4304;Name=SH03_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21570;old_locus_tag=SH03_21580 NZ_CP010441.1 Protein Homology CDS 4345329 4345712 . + 0 ID=cds4197;Parent=gene4304;Dbxref=Genbank:WP_001271686.1;Name=WP_001271686.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001271686.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 4345765 4347454 . + . ID=id226;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 4345817 4346167 . + . ID=gene4305;Name=SH03_RS21575;end_range=4346167,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS21575;partial=true;pseudo=true NZ_CP010441.1 Protein Homology CDS 4345817 4346167 . + 0 ID=cds4198;Parent=gene4305;end_range=4346167,.;gbkey=CDS;partial=true;product=lyase;pseudo=true;transl_except=(pos:4346060..4346062%2Caa:Other);transl_table=11 NZ_CP010441.1 RefSeq gene 4346308 4347444 . + . ID=gene4306;Name=SH03_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21580;old_locus_tag=SH03_21590 NZ_CP010441.1 Protein Homology CDS 4346308 4347444 . + 0 ID=cds4199;Parent=gene4306;Dbxref=Genbank:WP_038432679.1;Name=WP_038432679.1;gbkey=CDS;product=H repeat-associated protein YhhI;protein_id=WP_038432679.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4347609 4348733 . - . ID=gene4307;Name=SH03_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21585;old_locus_tag=SH03_21595 NZ_CP010441.1 Protein Homology CDS 4347609 4348733 . - 0 ID=cds4200;Parent=gene4307;Dbxref=Genbank:WP_001216257.1;Name=WP_001216257.1;gbkey=CDS;product=inner membrane transport permease YhhJ;protein_id=WP_001216257.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4348733 4351468 . - . ID=gene4308;Name=SH03_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21590;old_locus_tag=SH03_21600 NZ_CP010441.1 Protein Homology CDS 4348733 4351468 . - 0 ID=cds4201;Parent=gene4308;Dbxref=Genbank:WP_000149156.1;Name=WP_000149156.1;gbkey=CDS;product=ribosome-associated ATPase;protein_id=WP_000149156.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4351465 4352532 . - . ID=gene4309;Name=SH03_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21595;old_locus_tag=SH03_21605 NZ_CP010441.1 Protein Homology CDS 4351465 4352532 . - 0 ID=cds4202;Parent=gene4309;Dbxref=Genbank:WP_000361477.1;Name=WP_000361477.1;gbkey=CDS;product=membrane fusion protein (MFP) of efflux pump;protein_id=WP_000361477.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4352898 4354520 . - . ID=gene4310;Name=SH03_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21600;old_locus_tag=SH03_21610 NZ_CP010441.1 Protein Homology CDS 4352898 4354520 . - 0 ID=cds4203;Parent=gene4310;Dbxref=Genbank:WP_038432682.1;Name=WP_038432682.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_038432682.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4354782 4356388 . - . ID=gene4311;Name=SH03_RS21605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS21605;pseudo=true NZ_CP010441.1 Protein Homology CDS 4354782 4356388 . - 0 ID=cds4204;Parent=gene4311;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 4356375 4356572 . - . ID=gene4312;Name=SH03_RS21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21610;old_locus_tag=SH03_21620 NZ_CP010441.1 Protein Homology CDS 4356375 4356572 . - 0 ID=cds4205;Parent=gene4312;Dbxref=Genbank:WP_001329175.1;Name=WP_001329175.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001329175.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4356701 4356799 . - . ID=gene4313;Name=SH03_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21615;old_locus_tag=SH03_21625 NZ_CP010441.1 Protein Homology CDS 4356701 4356799 . - 0 ID=cds4206;Parent=gene4313;Dbxref=Genbank:WP_032082756.1;Name=WP_032082756.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032082756.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4356816 4357823 . + . ID=gene4314;Name=SH03_RS21620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21620;old_locus_tag=SH03_21630 NZ_CP010441.1 Protein Homology CDS 4356816 4357823 . + 0 ID=cds4207;Parent=gene4314;Dbxref=Genbank:WP_001315888.1;Name=WP_001315888.1;gbkey=CDS;product=membrane protein;protein_id=WP_001315888.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4358138 4359340 . - . ID=gene4315;Name=SH03_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21625;old_locus_tag=SH03_21635 NZ_CP010441.1 Protein Homology CDS 4358138 4359340 . - 0 ID=cds4208;Parent=gene4315;Dbxref=Genbank:WP_000439170.1;Name=WP_000439170.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_000439170.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4359572 4361071 . + . ID=gene4316;Name=SH03_RS21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21630;old_locus_tag=SH03_21640 NZ_CP010441.1 Protein Homology CDS 4359572 4361071 . + 0 ID=cds4209;Parent=gene4316;Dbxref=Genbank:WP_000902780.1;Name=WP_000902780.1;Note=involved in the transport of inorganic phosphate;gbkey=CDS;product=Low-affinity inorganic phosphate transporter 1;protein_id=WP_000902780.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4361315 4361650 . - . ID=gene4317;Name=SH03_RS21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21635;old_locus_tag=SH03_21645 NZ_CP010441.1 Protein Homology CDS 4361315 4361650 . - 0 ID=cds4210;Parent=gene4317;Dbxref=Genbank:WP_000626187.1;Name=WP_000626187.1;Note=ppGpp-dependent%2C membrane associated%2C stress protein produced under conditions of nutrient deprivation%2C osmotic shock and oxidative stress;gbkey=CDS;product=universal stress protein B;protein_id=WP_000626187.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4362041 4362475 . + . ID=gene4318;Name=SH03_RS21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21640;old_locus_tag=SH03_21650 NZ_CP010441.1 Protein Homology CDS 4362041 4362475 . + 0 ID=cds4211;Parent=gene4318;Dbxref=Genbank:WP_000323571.1;Name=WP_000323571.1;Note=involved in resistance to DNA-damaging agents;gbkey=CDS;product=universal stress protein A;protein_id=WP_000323571.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4362792 4364261 . + . ID=gene4319;Name=tppB;gbkey=Gene;gene=tppB;gene_biotype=protein_coding;gene_synonym=ydgR;locus_tag=SH03_RS21645;old_locus_tag=SH03_21655 NZ_CP010441.1 Protein Homology CDS 4362792 4364261 . + 0 ID=cds4212;Parent=gene4319;Dbxref=Genbank:WP_001098652.1;Name=WP_001098652.1;Note=mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation;gbkey=CDS;gene=tppB;product=dipeptide and tripeptide permease B;protein_id=WP_001098652.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4364310 4365062 . - . ID=gene4320;Name=SH03_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21650;old_locus_tag=SH03_21660 NZ_CP010441.1 Protein Homology CDS 4364310 4365062 . - 0 ID=cds4213;Parent=gene4320;Dbxref=Genbank:WP_000686620.1;Name=WP_000686620.1;Note=predicted SAM-dependent methyltransferase;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase J;protein_id=WP_000686620.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4365070 4367112 . - . ID=gene4321;Name=SH03_RS21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21655;old_locus_tag=SH03_21665 NZ_CP010441.1 Protein Homology CDS 4365070 4367112 . - 0 ID=cds4214;Parent=gene4321;Dbxref=Genbank:WP_001298719.1;Name=WP_001298719.1;gbkey=CDS;product=oligopeptidase A;protein_id=WP_001298719.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4367315 4368157 . + . ID=gene4322;Name=SH03_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21660;old_locus_tag=SH03_21670 NZ_CP010441.1 Protein Homology CDS 4367315 4368157 . + 0 ID=cds4215;Parent=gene4322;Dbxref=Genbank:WP_001300574.1;Name=WP_001300574.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase J;protein_id=WP_001300574.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4368229 4369581 . + . ID=gene4323;Name=SH03_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21665;old_locus_tag=SH03_21675 NZ_CP010441.1 Protein Homology CDS 4368229 4369581 . + 0 ID=cds4216;Parent=gene4323;Dbxref=Genbank:WP_038432684.1;Name=WP_038432684.1;Note=catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense;gbkey=CDS;product=glutathione reductase;protein_id=WP_038432684.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4369635 4369751 . - . ID=gene4324;Name=SH03_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21670;old_locus_tag=SH03_21680 NZ_CP010441.1 Protein Homology CDS 4369635 4369751 . - 0 ID=cds4217;Parent=gene4324;Dbxref=Genbank:WP_000555608.1;Name=WP_000555608.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000555608.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4369746 4369919 . + . ID=gene4325;Name=SH03_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21675;old_locus_tag=SH03_21685 NZ_CP010441.1 Protein Homology CDS 4369746 4369919 . + 0 ID=cds4218;Parent=gene4325;Dbxref=Genbank:WP_001300951.1;Name=WP_001300951.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001300951.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4370458 4370811 . + . ID=gene4326;Name=SH03_RS21680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21680;old_locus_tag=SH03_21690 NZ_CP010441.1 Protein Homology CDS 4370458 4370811 . + 0 ID=cds4219;Parent=gene4326;Dbxref=Genbank:WP_000008957.1;Name=WP_000008957.1;Note=regulates the expression of of the arsRBC involved in resistance to arsenic;gbkey=CDS;product=arsenical resistance operon repressor;protein_id=WP_000008957.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4370865 4372154 . + . ID=gene4327;Name=SH03_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21685;old_locus_tag=SH03_21695 NZ_CP010441.1 Protein Homology CDS 4370865 4372154 . + 0 ID=cds4220;Parent=gene4327;Dbxref=Genbank:WP_000922639.1;Name=WP_000922639.1;gbkey=CDS;product=arsenical pump membrane protein;protein_id=WP_000922639.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4372167 4372592 . + . ID=gene4328;Name=SH03_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21690;old_locus_tag=SH03_21700 NZ_CP010441.1 Protein Homology CDS 4372167 4372592 . + 0 ID=cds4221;Parent=gene4328;Dbxref=Genbank:WP_000065769.1;Name=WP_000065769.1;gbkey=CDS;product=arsenate reductase;protein_id=WP_000065769.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4373221 4374003 . + . ID=gene4329;Name=SH03_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21695;old_locus_tag=SH03_21705 NZ_CP010441.1 Protein Homology CDS 4373221 4374003 . + 0 ID=cds4222;Parent=gene4329;Dbxref=Genbank:WP_000020601.1;Name=WP_000020601.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000020601.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 4373960 4375166 . + . ID=id227;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 4374112 4375092 . - . ID=gene4330;Name=SH03_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21700;old_locus_tag=SH03_21710 NZ_CP010441.1 Protein Homology CDS 4374112 4375092 . - 0 ID=cds4223;Parent=gene4330;Dbxref=Genbank:WP_000019403.1;Name=WP_000019403.1;gbkey=CDS;product=transposase;protein_id=WP_000019403.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4375158 4375643 . + . ID=gene4331;Name=SH03_RS21705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS21705;partial=true;pseudo=true;start_range=.,4375158 NZ_CP010441.1 Protein Homology CDS 4375158 4375643 . + 0 ID=cds4224;Parent=gene4331;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4375158;transl_table=11 NZ_CP010441.1 RefSeq gene 4375891 4376457 . + . ID=gene4332;Name=SH03_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21710;old_locus_tag=SH03_21720 NZ_CP010441.1 Protein Homology CDS 4375891 4376457 . + 0 ID=cds4225;Parent=gene4332;Dbxref=Genbank:WP_001350553.1;Name=WP_001350553.1;gbkey=CDS;product=outer membrane protein slp;protein_id=WP_001350553.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4376613 4377143 . + . ID=gene4333;Name=SH03_RS21715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21715;old_locus_tag=SH03_21725 NZ_CP010441.1 Protein Homology CDS 4376613 4377143 . + 0 ID=cds4226;Parent=gene4333;Dbxref=Genbank:WP_000478619.1;Name=WP_000478619.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000478619.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4377185 4377832 . - . ID=gene4334;Name=SH03_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21720;old_locus_tag=SH03_21730 NZ_CP010441.1 Protein Homology CDS 4377185 4377832 . - 0 ID=cds4227;Parent=gene4334;Dbxref=Genbank:WP_001296814.1;Name=WP_001296814.1;gbkey=CDS;product=magnesium transporter ATPase;protein_id=WP_001296814.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4377896 4378222 . - . ID=gene4335;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=SH03_RS21725;old_locus_tag=SH03_21735 NZ_CP010441.1 Protein Homology CDS 4377896 4378222 . - 0 ID=cds4228;Parent=gene4335;Dbxref=Genbank:WP_001298717.1;Name=WP_001298717.1;gbkey=CDS;gene=hdeB;product=acid stress chaperone HdeB;protein_id=WP_001298717.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4378338 4378670 . - . ID=gene4336;Name=SH03_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21730;old_locus_tag=SH03_21740 NZ_CP010441.1 Protein Homology CDS 4378338 4378670 . - 0 ID=cds4229;Parent=gene4336;Dbxref=Genbank:WP_000756550.1;Name=WP_000756550.1;Note=inactive form;gbkey=CDS;product=acid stress chaperone HdeA;protein_id=WP_000756550.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4378925 4379497 . + . ID=gene4337;Name=SH03_RS21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21735;old_locus_tag=SH03_21745 NZ_CP010441.1 Protein Homology CDS 4378925 4379497 . + 0 ID=cds4230;Parent=gene4337;Dbxref=Genbank:WP_000965672.1;Name=WP_000965672.1;gbkey=CDS;product=protein HdeD;protein_id=WP_000965672.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4380296 4380823 . + . ID=gene4338;Name=SH03_RS21740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21740;old_locus_tag=SH03_21750 NZ_CP010441.1 Protein Homology CDS 4380296 4380823 . + 0 ID=cds4231;Parent=gene4338;Dbxref=Genbank:WP_000576690.1;Name=WP_000576690.1;gbkey=CDS;product=transcriptional regulator GadE;protein_id=WP_000576690.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4380824 4381102 . - . ID=gene4339;Name=SH03_RS21745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21745;old_locus_tag=SH03_21755 NZ_CP010441.1 Protein Homology CDS 4380824 4381102 . - 0 ID=cds4232;Parent=gene4339;Dbxref=Genbank:WP_001205329.1;Name=WP_001205329.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001205329.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4381162 4382319 . + . ID=gene4340;Name=SH03_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21750;old_locus_tag=SH03_21760 NZ_CP010441.1 Protein Homology CDS 4381162 4382319 . + 0 ID=cds4233;Parent=gene4340;Dbxref=Genbank:WP_001081984.1;Name=WP_001081984.1;gbkey=CDS;product=multidrug resistance protein MdtE;protein_id=WP_001081984.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4382344 4385457 . + . ID=gene4341;Name=SH03_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21755;old_locus_tag=SH03_21765 NZ_CP010441.1 Protein Homology CDS 4382344 4385457 . + 0 ID=cds4234;Parent=gene4341;Dbxref=Genbank:WP_000024872.1;Name=WP_000024872.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_000024872.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4385820 4386548 . - . ID=gene4342;Name=SH03_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21760;old_locus_tag=SH03_21770 NZ_CP010441.1 Protein Homology CDS 4385820 4386548 . - 0 ID=cds4235;Parent=gene4342;Dbxref=Genbank:WP_000149999.1;Name=WP_000149999.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000149999.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4386916 4387740 . - . ID=gene4343;Name=SH03_RS21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21765;old_locus_tag=SH03_21775 NZ_CP010441.1 Protein Homology CDS 4386916 4387740 . - 0 ID=cds4236;Parent=gene4343;Dbxref=Genbank:WP_001191059.1;Name=WP_001191059.1;Note=regulates genes in response to acid and/or during stationary phase;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001191059.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 4388106 4389477 . + . ID=id228;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 4388110 4389510 . - . ID=gene4344;Name=SH03_RS21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21770;old_locus_tag=SH03_21780 NZ_CP010441.1 Protein Homology CDS 4388110 4389510 . - 0 ID=cds4237;Parent=gene4344;Dbxref=Genbank:WP_000372240.1;Name=WP_000372240.1;gbkey=CDS;product=glutamate decarboxylase alpha;protein_id=WP_000372240.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4389721 4391118 . - . ID=gene4345;Name=SH03_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21775;old_locus_tag=SH03_21785 NZ_CP010441.1 Protein Homology CDS 4389721 4391118 . - 0 ID=cds4238;Parent=gene4345;Dbxref=Genbank:WP_000784827.1;Name=WP_000784827.1;gbkey=CDS;product=cytochrome c peroxidase;protein_id=WP_000784827.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4391522 4393171 . + . ID=gene4346;Name=treF;gbkey=Gene;gene=treF;gene_biotype=protein_coding;locus_tag=SH03_RS21780;old_locus_tag=SH03_21790 NZ_CP010441.1 Protein Homology CDS 4391522 4393171 . + 0 ID=cds4239;Parent=gene4346;Dbxref=Genbank:WP_000934216.1;Name=WP_000934216.1;Note=cytoplasmic%3B catalyzes the hydrolysis of trehalose to glucose;gbkey=CDS;gene=treF;product=trehalase;protein_id=WP_000934216.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4393222 4393824 . - . ID=gene4347;Name=SH03_RS21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21785;old_locus_tag=SH03_21795 NZ_CP010441.1 Protein Homology CDS 4393222 4393824 . - 0 ID=cds4240;Parent=gene4347;Dbxref=Genbank:WP_001167676.1;Name=WP_001167676.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_001167676.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4394344 4395243 . + . ID=gene4348;Name=SH03_RS21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21790;old_locus_tag=SH03_21800 NZ_CP010441.1 Protein Homology CDS 4394344 4395243 . + 0 ID=cds4241;Parent=gene4348;Dbxref=Genbank:WP_000357790.1;Name=WP_000357790.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_000357790.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4395292 4396305 . + . ID=gene4349;Name=SH03_RS21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21795;old_locus_tag=SH03_21805 NZ_CP010441.1 Protein Homology CDS 4395292 4396305 . + 0 ID=cds4242;Parent=gene4349;Dbxref=Genbank:WP_000191237.1;Name=WP_000191237.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000191237.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4396716 4398038 . + . ID=gene4350;Name=SH03_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21800;old_locus_tag=SH03_21810 NZ_CP010441.1 Protein Homology CDS 4396716 4398038 . + 0 ID=cds4243;Parent=gene4350;Dbxref=Genbank:WP_001149003.1;Name=WP_001149003.1;gbkey=CDS;product=metabolite transporter;protein_id=WP_001149003.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4398220 4400280 . - . ID=gene4351;Name=SH03_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21805;old_locus_tag=SH03_21815 NZ_CP010441.1 Protein Homology CDS 4398220 4400280 . - 0 ID=cds4244;Parent=gene4351;Dbxref=Genbank:WP_001296794.1;Name=WP_001296794.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001296794.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4400350 4401117 . - . ID=gene4352;Name=SH03_RS21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21810;old_locus_tag=SH03_21820 NZ_CP010441.1 Protein Homology CDS 4400350 4401117 . - 0 ID=cds4245;Parent=gene4352;Dbxref=Genbank:WP_001295219.1;Name=WP_001295219.1;Note=in Escherichia coli this protein is involved in flagellar function;gbkey=CDS;product=cyclic di-GMP phosphodiesterase YhjH;protein_id=WP_001295219.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4401071 4401265 . + . ID=gene4353;Name=SH03_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21815;old_locus_tag=SH03_21825 NZ_CP010441.1 Protein Homology CDS 4401071 4401265 . + 0 ID=cds4246;Parent=gene4353;Dbxref=Genbank:WP_001328969.1;Name=WP_001328969.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001328969.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4401349 4402278 . + . ID=gene4354;Name=SH03_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21820;old_locus_tag=SH03_21830 NZ_CP010441.1 Protein Homology CDS 4401349 4402278 . + 0 ID=cds4247;Parent=gene4354;Dbxref=Genbank:WP_000037562.1;Name=WP_000037562.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate-6-phosphate from 2-dehydro-3-deoxy-D-gluconate;gbkey=CDS;product=2-dehydro-3-deoxygluconokinase;protein_id=WP_000037562.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4402374 4403870 . - . ID=gene4355;Name=SH03_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21825;old_locus_tag=SH03_21835 NZ_CP010441.1 Protein Homology CDS 4402374 4403870 . - 0 ID=cds4248;Parent=gene4355;Dbxref=Genbank:WP_001163141.1;Name=WP_001163141.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001163141.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4404091 4405377 . - . ID=gene4356;Name=SH03_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21830;old_locus_tag=SH03_21840 NZ_CP010441.1 Protein Homology CDS 4404091 4405377 . - 0 ID=cds4249;Parent=gene4356;Dbxref=Genbank:WP_000858214.1;Name=WP_000858214.1;Note=involved in the transport of C4-dicarboxylates across the membrane;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_000858214.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4405560 4407515 . - . ID=gene4357;Name=SH03_RS21835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21835;old_locus_tag=SH03_21845 NZ_CP010441.1 Protein Homology CDS 4405560 4407515 . - 0 ID=cds4250;Parent=gene4357;Dbxref=Genbank:WP_001300629.1;Name=WP_001300629.1;Note=HmsP in Yersinia pestis plays a role in invasion of epithelial cells%3B the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation%3B inner membrane protein;gbkey=CDS;product=biofilm formation regulator HmsP;protein_id=WP_001300629.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4407630 4411103 . - . ID=gene4358;Name=SH03_RS21840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21840;old_locus_tag=SH03_21850 NZ_CP010441.1 Protein Homology CDS 4407630 4411103 . - 0 ID=cds4251;Parent=gene4358;Dbxref=Genbank:WP_001225124.1;Name=WP_001225124.1;Note=cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium%3B the cellulose biosynthesis genes bcsA%2C bcsB%2C bcsZ and bcsC are constitutively transcribed%2C however%2C cellulose synthesis is dependent on the expression of adrA;gbkey=CDS;product=cellulose synthase operon protein C;protein_id=WP_001225124.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4411085 4412191 . - . ID=gene4359;Name=SH03_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21845;old_locus_tag=SH03_21855 NZ_CP010441.1 Protein Homology CDS 4411085 4412191 . - 0 ID=cds4252;Parent=gene4359;Dbxref=Genbank:WP_001311203.1;Name=WP_001311203.1;Note=catalyzes the hydrolysis of 1%2C4-beta-D-glucosidic linkages in cellulose%2C lichenin and cereal beta-D-glucans;gbkey=CDS;product=endoglucanase;protein_id=WP_001311203.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4412198 4414537 . - . ID=gene4360;Name=SH03_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21850;old_locus_tag=SH03_21860 NZ_CP010441.1 Protein Homology CDS 4412198 4414537 . - 0 ID=cds4253;Parent=gene4360;Dbxref=Genbank:WP_001407405.1;Name=WP_001407405.1;Note=binds the cellulose synthase activator%2C bis-(3'-5') cyclic diguanylic acid (c-di-GMP);gbkey=CDS;product=cyclic di-GMP-binding protein;protein_id=WP_001407405.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4414548 4417166 . - . ID=gene4361;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=SH03_RS21855;old_locus_tag=SH03_21865 NZ_CP010441.1 Protein Homology CDS 4414548 4417166 . - 0 ID=cds4254;Parent=gene4361;Dbxref=Genbank:WP_000025892.1;Name=WP_000025892.1;Note=polymerizes uridine 5'-diphosphate glucose to cellulose%3B acts with BcsB%2C BcsZ and BcsC in cellulose biosynthesis;gbkey=CDS;gene=bcsA;product=cellulose synthase catalytic subunit [UDP-forming];protein_id=WP_000025892.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4417163 4417834 . - . ID=gene4362;Name=SH03_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21860;old_locus_tag=SH03_21870 NZ_CP010441.1 Protein Homology CDS 4417163 4417834 . - 0 ID=cds4255;Parent=gene4362;Dbxref=Genbank:WP_000900250.1;Name=WP_000900250.1;gbkey=CDS;product=cell division protein;protein_id=WP_000900250.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4417927 4418115 . - . ID=gene4363;Name=SH03_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21865;old_locus_tag=SH03_21875 NZ_CP010441.1 Protein Homology CDS 4417927 4418115 . - 0 ID=cds4256;Parent=gene4363;Dbxref=Genbank:WP_001063318.1;Name=WP_001063318.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001063318.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 4418356 4419558 . + . ID=id229;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 4418506 4419486 . - . ID=gene4364;Name=SH03_RS21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21870;old_locus_tag=SH03_21880 NZ_CP010441.1 Protein Homology CDS 4418506 4419486 . - 0 ID=cds4257;Parent=gene4364;Dbxref=Genbank:WP_000019403.1;Name=WP_000019403.1;gbkey=CDS;product=transposase;protein_id=WP_000019403.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4419599 4421158 . + . ID=gene4365;Name=SH03_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21875;old_locus_tag=SH03_21885 NZ_CP010441.1 Protein Homology CDS 4419599 4421158 . + 0 ID=cds4258;Parent=gene4365;Dbxref=Genbank:WP_001296789.1;Name=WP_001296789.1;Note=required for cellulose biosynthesis;gbkey=CDS;product=cellulose biosynthesis protein BcsE;protein_id=WP_001296789.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4421155 4421346 . + . ID=gene4366;Name=SH03_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21880;old_locus_tag=SH03_21890 NZ_CP010441.1 Protein Homology CDS 4421155 4421346 . + 0 ID=cds4259;Parent=gene4366;Dbxref=Genbank:WP_000988308.1;Name=WP_000988308.1;gbkey=CDS;product=protein BcsF;protein_id=WP_000988308.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4421343 4423022 . + . ID=gene4367;Name=SH03_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21885;old_locus_tag=SH03_21895 NZ_CP010441.1 Protein Homology CDS 4421343 4423022 . + 0 ID=cds4260;Parent=gene4367;Dbxref=Genbank:WP_000191622.1;Name=WP_000191622.1;gbkey=CDS;product=protein BcsG;protein_id=WP_000191622.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4423109 4423216 . - . ID=gene4368;Name=SH03_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21890 NZ_CP010441.1 Protein Homology CDS 4423109 4423216 . - 0 ID=cds4261;Parent=gene4368;Dbxref=Genbank:WP_000141634.1;Name=WP_000141634.1;gbkey=CDS;product=small toxic polypeptide LdrD;protein_id=WP_000141634.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4423381 4423542 . - . ID=gene4369;Name=SH03_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21895;old_locus_tag=SH03_21905 NZ_CP010441.1 Protein Homology CDS 4423381 4423542 . - 0 ID=cds4262;Parent=gene4369;Dbxref=Genbank:WP_001326762.1;Name=WP_001326762.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001326762.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4423692 4424963 . + . ID=gene4370;Name=SH03_RS21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21900;old_locus_tag=SH03_21910 NZ_CP010441.1 Protein Homology CDS 4423692 4424963 . + 0 ID=cds4263;Parent=gene4370;Dbxref=Genbank:WP_001295225.1;Name=WP_001295225.1;gbkey=CDS;product=transporter;protein_id=WP_001295225.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4424993 4425997 . - . ID=gene4371;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=SH03_RS21905;old_locus_tag=SH03_21915 NZ_CP010441.1 Protein Homology CDS 4424993 4425997 . - 0 ID=cds4264;Parent=gene4371;Dbxref=Genbank:WP_000107012.1;Name=WP_000107012.1;Note=Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides;gbkey=CDS;gene=dppF;product=dipeptide transport ATP-binding protein DppF;protein_id=WP_000107012.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4425994 4426977 . - . ID=gene4372;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=SH03_RS21910;old_locus_tag=SH03_21920 NZ_CP010441.1 Protein Homology CDS 4425994 4426977 . - 0 ID=cds4265;Parent=gene4372;Dbxref=Genbank:WP_001196486.1;Name=WP_001196486.1;Note=DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF;gbkey=CDS;gene=dppD;product=dipeptide transport ATP-binding protein DppD;protein_id=WP_001196486.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4426988 4427890 . - . ID=gene4373;Name=SH03_RS21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21915;old_locus_tag=SH03_21925 NZ_CP010441.1 Protein Homology CDS 4426988 4427890 . - 0 ID=cds4266;Parent=gene4373;Dbxref=Genbank:WP_000084677.1;Name=WP_000084677.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_000084677.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4427900 4428919 . - . ID=gene4374;Name=SH03_RS21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21920;old_locus_tag=SH03_21930 NZ_CP010441.1 Protein Homology CDS 4427900 4428919 . - 0 ID=cds4267;Parent=gene4374;Dbxref=Genbank:WP_000938855.1;Name=WP_000938855.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_000938855.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4428937 4429164 . + . ID=gene4375;Name=SH03_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21925;old_locus_tag=SH03_21935 NZ_CP010441.1 Protein Homology CDS 4428937 4429164 . + 0 ID=cds4268;Parent=gene4375;Dbxref=Genbank:WP_001300936.1;Name=WP_001300936.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001300936.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4429227 4430834 . - . ID=gene4376;Name=SH03_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21930;old_locus_tag=SH03_21940 NZ_CP010441.1 Protein Homology CDS 4429227 4430834 . - 0 ID=cds4269;Parent=gene4376;Dbxref=Genbank:WP_001222883.1;Name=WP_001222883.1;Note=DppABCDF is involved in the transport of dipeptides%3B also binds heme and mediates chemotaxis to dipeptides;gbkey=CDS;product=periplasmic dipeptide transporter;protein_id=WP_001222883.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4431186 4431446 . - . ID=gene4377;Name=SH03_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21935;old_locus_tag=SH03_21945 NZ_CP010441.1 Protein Homology CDS 4431186 4431446 . - 0 ID=cds4270;Parent=gene4377;Dbxref=Genbank:WP_001110989.1;Name=WP_001110989.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001110989.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 4431488 4431595 . + . ID=id230;gbkey=repeat_region NZ_CP010441.1 RefSeq repeat_region 4431656 4431763 . + . ID=id231;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 4431745 4431821 . - . ID=gene4378;Name=SH03_RS21940;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS21940;old_locus_tag=SH03_21950 NZ_CP010441.1 tRNAscan-SE tRNA 4431745 4431821 . - . ID=rna107;Parent=gene4378;anticodon=(pos:complement(4431785..4431787));gbkey=tRNA;product=tRNA-Pro NZ_CP010441.1 tRNAscan-SE exon 4431745 4431821 . - . ID=id232;Parent=rna107;anticodon=(pos:complement(4431785..4431787));gbkey=tRNA;product=tRNA-Pro NZ_CP010441.1 RefSeq gene 4431913 4433604 . - . ID=gene4379;Name=SH03_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21945;old_locus_tag=SH03_21955 NZ_CP010441.1 Protein Homology CDS 4431913 4433604 . - 0 ID=cds4271;Parent=gene4379;Dbxref=Genbank:WP_001269197.1;Name=WP_001269197.1;Note=catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide;gbkey=CDS;product=phosphoethanolamine transferase EptB;protein_id=WP_001269197.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4433928 4435136 . - . ID=gene4380;Name=SH03_RS21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21950;old_locus_tag=SH03_21960 NZ_CP010441.1 Protein Homology CDS 4433928 4435136 . - 0 ID=cds4272;Parent=gene4380;Dbxref=Genbank:WP_000189019.1;Name=WP_000189019.1;gbkey=CDS;product=pyruvate-inducible inner membrane protein transporter;protein_id=WP_000189019.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4435365 4436063 . - . ID=gene4381;Name=SH03_RS21955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21955;old_locus_tag=SH03_21965 NZ_CP010441.1 Protein Homology CDS 4435365 4436063 . - 0 ID=cds4273;Parent=gene4381;Dbxref=Genbank:WP_001299523.1;Name=WP_001299523.1;gbkey=CDS;product=autotransporter beta-domain protein;protein_id=WP_001299523.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4436221 4436784 . + . ID=gene4382;Name=SH03_RS21960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21960;old_locus_tag=SH03_21970 NZ_CP010441.1 Protein Homology CDS 4436221 4436784 . + 0 ID=cds4274;Parent=gene4382;Dbxref=Genbank:WP_000438957.1;Name=WP_000438957.1;gbkey=CDS;product=DNA-3-methyladenine glycosylase 1;protein_id=WP_000438957.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4436781 4437221 . + . ID=gene4383;Name=SH03_RS21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21965;old_locus_tag=SH03_21975 NZ_CP010441.1 Protein Homology CDS 4436781 4437221 . + 0 ID=cds4275;Parent=gene4383;Dbxref=Genbank:WP_000617473.1;Name=WP_000617473.1;gbkey=CDS;product=GNAT family acetyltransferase;protein_id=WP_000617473.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4437190 4439469 . - . ID=gene4384;Name=SH03_RS21970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21970;old_locus_tag=SH03_21980 NZ_CP010441.1 Protein Homology CDS 4437190 4439469 . - 0 ID=cds4276;Parent=gene4384;Dbxref=Genbank:WP_001311208.1;Name=WP_001311208.1;Note=catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine;gbkey=CDS;product=biotin sulfoxide reductase;protein_id=WP_001311208.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4439676 4440335 . + . ID=gene4385;Name=SH03_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21975;old_locus_tag=SH03_21985 NZ_CP010441.1 Protein Homology CDS 4439676 4440335 . + 0 ID=cds4277;Parent=gene4385;Dbxref=Genbank:WP_000747625.1;Name=WP_000747625.1;gbkey=CDS;product=lipoprotein;protein_id=WP_000747625.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4440439 4441413 . + . ID=gene4386;Name=SH03_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21980;old_locus_tag=SH03_21990 NZ_CP010441.1 Protein Homology CDS 4440439 4441413 . + 0 ID=cds4278;Parent=gene4386;Dbxref=Genbank:WP_000805038.1;Name=WP_000805038.1;Note=catalyzes the formation of glycolate from glyoxylate and glycerate from hydroxypyruvate;gbkey=CDS;product=glyoxylate/hydroxypyruvate reductase B;protein_id=WP_000805038.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4441463 4442173 . - . ID=gene4387;Name=SH03_RS21985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21985;old_locus_tag=SH03_21995 NZ_CP010441.1 Protein Homology CDS 4441463 4442173 . - 0 ID=cds4279;Parent=gene4387;Dbxref=Genbank:WP_000190516.1;Name=WP_000190516.1;gbkey=CDS;product=DUF3053 domain-containing protein;protein_id=WP_000190516.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4442607 4442897 . + . ID=gene4388;Name=SH03_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21990;old_locus_tag=SH03_22000 NZ_CP010441.1 Protein Homology CDS 4442607 4442897 . + 0 ID=cds4280;Parent=gene4388;Dbxref=Genbank:WP_000455798.1;Name=WP_000455798.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000455798.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4443178 4443390 . + . ID=gene4389;Name=SH03_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS21995;old_locus_tag=SH03_22005 NZ_CP010441.1 Protein Homology CDS 4443178 4443390 . + 0 ID=cds4281;Parent=gene4389;Dbxref=Genbank:WP_000014594.1;Name=WP_000014594.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_000014594.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4443577 4443729 . - . ID=gene4390;Name=SH03_RS22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22000;old_locus_tag=SH03_22010 NZ_CP010441.1 Protein Homology CDS 4443577 4443729 . - 0 ID=cds4282;Parent=gene4390;Dbxref=Genbank:WP_001135732.1;Name=WP_001135732.1;gbkey=CDS;product=protein HokA;protein_id=WP_001135732.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4443809 4444330 . + . ID=gene4391;Name=SH03_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22005;old_locus_tag=SH03_22015 NZ_CP010441.1 Protein Homology CDS 4443809 4444330 . + 0 ID=cds4283;Parent=gene4391;Dbxref=Genbank:WP_000042691.1;Name=WP_000042691.1;gbkey=CDS;product=transposase;protein_id=WP_000042691.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4444327 4445178 . + . ID=gene4392;Name=SH03_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22010;old_locus_tag=SH03_22020 NZ_CP010441.1 Protein Homology CDS 4444327 4445178 . + 0 ID=cds4284;Parent=gene4392;Dbxref=Genbank:WP_000866395.1;Name=WP_000866395.1;gbkey=CDS;product=transposase;protein_id=WP_000866395.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4445457 4447526 . - . ID=gene4393;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=SH03_RS22015;old_locus_tag=SH03_22025 NZ_CP010441.1 Protein Homology CDS 4445457 4447526 . - 0 ID=cds4285;Parent=gene4393;Dbxref=Genbank:WP_001291772.1;Name=WP_001291772.1;Note=glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=glyS;product=glycine--tRNA ligase subunit beta;protein_id=WP_001291772.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4447536 4448447 . - . ID=gene4394;Name=SH03_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22020;old_locus_tag=SH03_22030 NZ_CP010441.1 Protein Homology CDS 4447536 4448447 . - 0 ID=cds4286;Parent=gene4394;Dbxref=Genbank:WP_001168544.1;Name=WP_001168544.1;gbkey=CDS;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168544.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4448542 4448841 . - . ID=gene4395;Name=SH03_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22025;old_locus_tag=SH03_22035 NZ_CP010441.1 Protein Homology CDS 4448542 4448841 . - 0 ID=cds4287;Parent=gene4395;Dbxref=Genbank:WP_000980107.1;Name=WP_000980107.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000980107.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4449016 4450011 . + . ID=gene4396;Name=SH03_RS22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22030;old_locus_tag=SH03_22040 NZ_CP010441.1 Protein Homology CDS 4449016 4450011 . + 0 ID=cds4288;Parent=gene4396;Dbxref=Genbank:WP_001182650.1;Name=WP_001182650.1;Note=involved in enterobacterial common antigen biosynthesis%3B catalyzes the addition of O-acetyl groups to the N-acetyl-D-glucosamine residues of the trisaccharide repeat units of the enterobacterial common antigen;gbkey=CDS;product=hypothetical protein;protein_id=WP_001182650.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4450053 4450490 . - . ID=gene4397;Name=SH03_RS22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22035;old_locus_tag=SH03_22045 NZ_CP010441.1 Protein Homology CDS 4450053 4450490 . - 0 ID=cds4289;Parent=gene4397;Dbxref=Genbank:WP_001296808.1;Name=WP_001296808.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001296808.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4450536 4450877 . - . ID=gene4398;Name=SH03_RS22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22040;old_locus_tag=SH03_22050 NZ_CP010441.1 Protein Homology CDS 4450536 4450877 . - 0 ID=cds4290;Parent=gene4398;Dbxref=Genbank:WP_001295228.1;Name=WP_001295228.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001295228.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4451046 4452500 . - . ID=gene4399;Name=SH03_RS22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22045;old_locus_tag=SH03_22055 NZ_CP010441.1 Protein Homology CDS 4451046 4452500 . - 0 ID=cds4291;Parent=gene4399;Dbxref=Genbank:WP_038432687.1;Name=WP_038432687.1;Note=catalyzes the formation of D-xylulose-5-phosphate fro D-xylulose;gbkey=CDS;product=xylulose kinase;protein_id=WP_038432687.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4452572 4453894 . - . ID=gene4400;Name=SH03_RS22050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22050;old_locus_tag=SH03_22060 NZ_CP010441.1 Protein Homology CDS 4452572 4453894 . - 0 ID=cds4292;Parent=gene4400;Dbxref=Genbank:WP_038432690.1;Name=WP_038432690.1;Note=catalyzes the interconversion of D-xylose to D-xylulose;gbkey=CDS;product=xylose isomerase;protein_id=WP_038432690.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4454182 4454559 . + . ID=gene4401;Name=xylF;end_range=4454559,.;gbkey=Gene;gene=xylF;gene_biotype=pseudogene;locus_tag=SH03_RS22055;partial=true;pseudo=true NZ_CP010441.1 Protein Homology CDS 4454182 4454559 . + 0 ID=cds4293;Parent=gene4401;Note=periplasmic substrate-binding component of the ATP-dependent xylose transport system%3B high affinity;end_range=4454559,.;exception=unextendable partial coding region;gbkey=CDS;gene=xylF;partial=true;product=D-xylose transporter subunit XylF;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 4454557 4455325 . + . ID=id233;gbkey=repeat_region;gene=xylF NZ_CP010441.1 RefSeq gene 4454573 4455076 . - . ID=gene4402;Name=SH03_RS22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22060;old_locus_tag=SH03_22070 NZ_CP010441.1 Protein Homology CDS 4454573 4455076 . - 0 ID=cds4294;Parent=gene4402;Dbxref=Genbank:WP_001119362.1;Name=WP_001119362.1;gbkey=CDS;product=transposase;protein_id=WP_001119362.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4455325 4456029 . + . ID=gene4403;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=pseudogene;locus_tag=SH03_RS22065;partial=true;pseudo=true;start_range=.,4455325 NZ_CP010441.1 Protein Homology CDS 4455325 4456029 . + 0 ID=cds4295;Parent=gene4403;Note=periplasmic substrate-binding component of the ATP-dependent xylose transport system%3B high affinity;exception=unextendable partial coding region;gbkey=CDS;gene=xylF;partial=true;product=D-xylose transporter subunit XylF;pseudo=true;start_range=.,4455325;transl_table=11 NZ_CP010441.1 RefSeq gene 4456107 4457648 . + . ID=gene4404;Name=SH03_RS22070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22070;old_locus_tag=SH03_22080 NZ_CP010441.1 Protein Homology CDS 4456107 4457648 . + 0 ID=cds4296;Parent=gene4404;Dbxref=Genbank:WP_001146473.1;Name=WP_001146473.1;Note=with XylFH is part of the high affinity xylose ABC transporter;gbkey=CDS;product=xylose import ATP-binding protein XylG;protein_id=WP_001146473.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4457626 4458807 . + . ID=gene4405;Name=SH03_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22075;old_locus_tag=SH03_22085 NZ_CP010441.1 Protein Homology CDS 4457626 4458807 . + 0 ID=cds4297;Parent=gene4405;Dbxref=Genbank:WP_000045978.1;Name=WP_000045978.1;gbkey=CDS;product=xylose ABC transporter permease;protein_id=WP_000045978.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4458885 4460063 . + . ID=gene4406;Name=SH03_RS22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22080;old_locus_tag=SH03_22090 NZ_CP010441.1 Protein Homology CDS 4458885 4460063 . + 0 ID=cds4298;Parent=gene4406;Dbxref=Genbank:WP_000494484.1;Name=WP_000494484.1;gbkey=CDS;product=xylose operon regulatory protein;protein_id=WP_000494484.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4460259 4461083 . - . ID=gene4407;Name=SH03_RS22085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22085;old_locus_tag=SH03_22095 NZ_CP010441.1 Protein Homology CDS 4460259 4461083 . - 0 ID=cds4299;Parent=gene4407;Dbxref=Genbank:WP_001297957.1;Name=WP_001297957.1;gbkey=CDS;product=protein bax;protein_id=WP_001297957.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4461403 4463433 . + . ID=gene4408;Name=malS;gbkey=Gene;gene=malS;gene_biotype=protein_coding;locus_tag=SH03_RS22090;old_locus_tag=SH03_22100 NZ_CP010441.1 Protein Homology CDS 4461403 4463433 . + 0 ID=cds4300;Parent=gene4408;Dbxref=Genbank:WP_000761225.1;Name=WP_000761225.1;Note=periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB%3B hydrolyzes alpha-(1%2C4) glycosidic linkages%3B contains internal disulfide bonds;gbkey=CDS;gene=malS;product=alpha-amylase;protein_id=WP_000761225.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4463611 4464864 . + . ID=gene4409;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=SH03_RS22095;old_locus_tag=SH03_22105 NZ_CP010441.1 Protein Homology CDS 4463611 4464864 . + 0 ID=cds4301;Parent=gene4409;Dbxref=Genbank:WP_000144363.1;Name=WP_000144363.1;Note=transaminase C%3B catalyzes transamination of alanine%2C valine%2C and 2-aminobutyrate with their respective 2-keto acids%3B also catalyzes terminal step in valine biosynthesis;gbkey=CDS;gene=avtA;product=valine--pyruvate aminotransferase;protein_id=WP_000144363.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4464868 4464996 . + . ID=gene4410;Name=SH03_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22100;old_locus_tag=SH03_22110 NZ_CP010441.1 Protein Homology CDS 4464868 4464996 . + 0 ID=cds4302;Parent=gene4410;Dbxref=Genbank:WP_001331222.1;Name=WP_001331222.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001331222.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4465015 4465488 . - . ID=gene4411;Name=SH03_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22105;old_locus_tag=SH03_22115 NZ_CP010441.1 Protein Homology CDS 4465015 4465488 . - 0 ID=cds4303;Parent=gene4411;Dbxref=Genbank:WP_001300918.1;Name=WP_001300918.1;gbkey=CDS;product=hydrogenase 4Fe-4S ferredoxin-type component;protein_id=WP_001300918.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4465590 4466438 . - . ID=gene4412;Name=SH03_RS22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22110;old_locus_tag=SH03_22120 NZ_CP010441.1 Protein Homology CDS 4465590 4466438 . - 0 ID=cds4304;Parent=gene4412;Dbxref=Genbank:WP_000514240.1;Name=WP_000514240.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000514240.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4466639 4467637 . + . ID=gene4413;Name=SH03_RS22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22115;old_locus_tag=SH03_22125 NZ_CP010441.1 Protein Homology CDS 4466639 4467637 . + 0 ID=cds4305;Parent=gene4413;Dbxref=Genbank:WP_000869037.1;Name=WP_000869037.1;Note=NAD(P)H-dependent%3B catalyzes the reduction of 2%2C3-diketo-L-gulonate to 3-keto-L-gulonate;gbkey=CDS;product=2%2C3-diketo-L-gulonate reductase;protein_id=WP_000869037.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4467649 4468116 . + . ID=gene4414;Name=SH03_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22120;old_locus_tag=SH03_22130 NZ_CP010441.1 Protein Homology CDS 4467649 4468116 . + 0 ID=cds4306;Parent=gene4414;Dbxref=Genbank:WP_000576079.1;Name=WP_000576079.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000576079.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4468234 4468707 . + . ID=gene4415;Name=SH03_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22125;old_locus_tag=SH03_22135 NZ_CP010441.1 Protein Homology CDS 4468234 4468707 . + 0 ID=cds4307;Parent=gene4415;Dbxref=Genbank:WP_000721664.1;Name=WP_000721664.1;Note=membrane-spanning protein involved in uptake of 2%2C3-diketo-L-gulonate%3B part of the tri-partite ATP-independent periplasmic transport system (TRAP) YiaMNO;gbkey=CDS;product=2%2C3-diketo-L-gulonate TRAP transporter permease;protein_id=WP_000721664.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4468710 4469987 . + . ID=gene4416;Name=SH03_RS22130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22130;old_locus_tag=SH03_22140 NZ_CP010441.1 Protein Homology CDS 4468710 4469987 . + 0 ID=cds4308;Parent=gene4416;Dbxref=Genbank:WP_000279599.1;Name=WP_000279599.1;Note=TRAP family transporter%3B with YiaMO is involved in the uptake of L-dehydroascorbate;gbkey=CDS;product=2%2C3-diketo-L-gulonate TRAP transporter permease;protein_id=WP_000279599.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4470000 4470986 . + . ID=gene4417;Name=SH03_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22135;old_locus_tag=SH03_22145 NZ_CP010441.1 Protein Homology CDS 4470000 4470986 . + 0 ID=cds4309;Parent=gene4417;Dbxref=Genbank:WP_000776887.1;Name=WP_000776887.1;Note=involved in the transport of 2%2C3-diketo-L-gulonate;gbkey=CDS;product=2%2C3-diketo-L-gulonate ABC transporter substrate-binding protein;protein_id=WP_000776887.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4470990 4472486 . + . ID=gene4418;Name=SH03_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22140;old_locus_tag=SH03_22150 NZ_CP010441.1 Protein Homology CDS 4470990 4472486 . + 0 ID=cds4310;Parent=gene4418;Dbxref=Genbank:WP_000196054.1;Name=WP_000196054.1;Note=catalyzes the formation of L-xylulose 5-phosphate and 3-dehydro-L-gulonate 6-phosphate from L-xylulose or 3-dehydro-L-gulonate%2C respectively;gbkey=CDS;product=L-xylulose/3-keto-L-gulonate kinase;protein_id=WP_000196054.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4472483 4473145 . + . ID=gene4419;Name=sgbH;gbkey=Gene;gene=sgbH;gene_biotype=protein_coding;locus_tag=SH03_RS22145;old_locus_tag=SH03_22155 NZ_CP010441.1 Protein Homology CDS 4472483 4473145 . + 0 ID=cds4311;Parent=gene4419;Dbxref=Genbank:WP_038432695.1;Name=WP_038432695.1;Note=catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate;gbkey=CDS;gene=sgbH;product=3-keto-L-gulonate-6-phosphate decarboxylase sgbH;protein_id=WP_038432695.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4473138 4473998 . + . ID=gene4420;Name=SH03_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22150;old_locus_tag=SH03_22160 NZ_CP010441.1 Protein Homology CDS 4473138 4473998 . + 0 ID=cds4312;Parent=gene4420;Dbxref=Genbank:WP_001350555.1;Name=WP_001350555.1;Note=L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated%3B may be involved in the utilization of 2%2C3-diketo-L-gulonate;gbkey=CDS;product=L-xylulose 5-phosphate 3-epimerase;protein_id=WP_001350555.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4473992 4474687 . + . ID=gene4421;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=SH03_RS22155;old_locus_tag=SH03_22165 NZ_CP010441.1 Protein Homology CDS 4473992 4474687 . + 0 ID=cds4313;Parent=gene4421;Dbxref=Genbank:WP_000893142.1;Name=WP_000893142.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase SgbE;protein_id=WP_000893142.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4475034 4475774 . - . ID=gene4422;Name=SH03_RS22160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22160;old_locus_tag=SH03_22170 NZ_CP010441.1 Protein Homology CDS 4475034 4475774 . - 0 ID=cds4314;Parent=gene4422;Dbxref=Genbank:WP_000906819.1;Name=WP_000906819.1;gbkey=CDS;product=outer membrane protein;protein_id=WP_000906819.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4475898 4476872 . + . ID=gene4423;Name=SH03_RS22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22165;old_locus_tag=SH03_22175 NZ_CP010441.1 Protein Homology CDS 4475898 4476872 . + 0 ID=cds4315;Parent=gene4423;Dbxref=Genbank:WP_000164036.1;Name=WP_000164036.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000164036.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4476869 4478005 . - . ID=gene4424;Name=SH03_RS22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22170;old_locus_tag=SH03_22180 NZ_CP010441.1 Protein Homology CDS 4476869 4478005 . - 0 ID=cds4316;Parent=gene4424;Dbxref=Genbank:WP_000364884.1;Name=WP_000364884.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000364884.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4478011 4478334 . - . ID=gene4425;Name=SH03_RS22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22175;old_locus_tag=SH03_22185 NZ_CP010441.1 Protein Homology CDS 4478011 4478334 . - 0 ID=cds4317;Parent=gene4425;Dbxref=Genbank:WP_000478195.1;Name=WP_000478195.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000478195.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4478448 4478660 . + . ID=gene4426;Name=SH03_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22180 NZ_CP010441.1 Protein Homology CDS 4478448 4478660 . + 0 ID=cds4318;Parent=gene4426;Dbxref=Genbank:WP_000332751.1;Name=WP_000332751.1;gbkey=CDS;product=membrane protein;protein_id=WP_000332751.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4478879 4480417 . - . ID=gene4427;Name=SH03_RS22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22185;old_locus_tag=SH03_22195 NZ_CP010441.1 Protein Homology CDS 4478879 4480417 . - 0 ID=cds4319;Parent=gene4427;Dbxref=Genbank:WP_000183980.1;Name=WP_000183980.1;Note=catalyzes the oxidation of acetaldehyde%2C benzaldehyde%2C propionaldehyde and other aldehydes;gbkey=CDS;product=aldehyde dehydrogenase B;protein_id=WP_000183980.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4480582 4481733 . - . ID=gene4428;Name=SH03_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22190;old_locus_tag=SH03_22200 NZ_CP010441.1 Protein Homology CDS 4480582 4481733 . - 0 ID=cds4320;Parent=gene4428;Dbxref=Genbank:WP_000741518.1;Name=WP_000741518.1;gbkey=CDS;product=alcohol dehydrogenase;protein_id=WP_000741518.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4481923 4483767 . - . ID=gene4429;Name=SH03_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22195;old_locus_tag=SH03_22205 NZ_CP010441.1 Protein Homology CDS 4481923 4483767 . - 0 ID=cds4321;Parent=gene4429;Dbxref=Genbank:WP_000582468.1;Name=WP_000582468.1;gbkey=CDS;product=selenocysteine-specific translation elongation factor;protein_id=WP_000582468.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4483764 4485155 . - . ID=gene4430;Name=SH03_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22200;old_locus_tag=SH03_22210 NZ_CP010441.1 Protein Homology CDS 4483764 4485155 . - 0 ID=cds4322;Parent=gene4430;Dbxref=Genbank:WP_000206275.1;Name=WP_000206275.1;Note=catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis;gbkey=CDS;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_000206275.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4485253 4485861 . - . ID=gene4431;Name=SH03_RS22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22205;old_locus_tag=SH03_22215 NZ_CP010441.1 Protein Homology CDS 4485253 4485861 . - 0 ID=cds4323;Parent=gene4431;Dbxref=Genbank:WP_000779792.1;Name=WP_000779792.1;gbkey=CDS;product=glutathione S-transferase;protein_id=WP_000779792.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 4486006 4489801 . + . ID=id234;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 4486089 4490222 . + . ID=gene4432;Name=SH03_RS22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22210;old_locus_tag=SH03_22220 NZ_CP010441.1 Protein Homology CDS 4486089 4490222 . + 0 ID=cds4324;Parent=gene4432;Dbxref=Genbank:WP_000015300.1;Name=WP_000015300.1;gbkey=CDS;product=RHS element protein RhsA;protein_id=WP_000015300.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 4490191 4490589 . + . ID=id235;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 4490243 4491085 . + . ID=gene4433;Name=SH03_RS22215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22215;old_locus_tag=SH03_22225 NZ_CP010441.1 Protein Homology CDS 4490243 4491085 . + 0 ID=cds4325;Parent=gene4433;Dbxref=Genbank:WP_000072850.1;Name=WP_000072850.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000072850.1;transl_table=11 NZ_CP010441.1 RefSeq repeat_region 4491126 4491557 . + . ID=id236;gbkey=repeat_region NZ_CP010441.1 RefSeq gene 4491133 4491828 . + . ID=gene4434;Name=SH03_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22220;old_locus_tag=SH03_22230 NZ_CP010441.1 Protein Homology CDS 4491133 4491828 . + 0 ID=cds4326;Parent=gene4434;Dbxref=Genbank:WP_001350556.1;Name=WP_001350556.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001350556.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4492083 4492544 . + . ID=gene4435;Name=SH03_RS22225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22225;old_locus_tag=SH03_22235 NZ_CP010441.1 Protein Homology CDS 4492083 4492544 . + 0 ID=cds4327;Parent=gene4435;Dbxref=Genbank:WP_000642478.1;Name=WP_000642478.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000642478.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4493251 4493689 . + . ID=gene4436;Name=SH03_RS22230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS22230;pseudo=true NZ_CP010441.1 Protein Homology CDS 4493251 4493689 . + 0 ID=cds4328;Parent=gene4436;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 4494149 4495285 . - . ID=gene4437;Name=SH03_RS22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22235;old_locus_tag=SH03_22245 NZ_CP010441.1 Protein Homology CDS 4494149 4495285 . - 0 ID=cds4329;Parent=gene4437;Dbxref=Genbank:WP_000364939.1;Name=WP_000364939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000364939.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4495288 4495650 . - . ID=gene4438;Name=SH03_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22240;old_locus_tag=SH03_22250 NZ_CP010441.1 Protein Homology CDS 4495288 4495650 . - 0 ID=cds4330;Parent=gene4438;Dbxref=Genbank:WP_000479624.1;Name=WP_000479624.1;gbkey=CDS;product=DUF3302 domain-containing protein;protein_id=WP_000479624.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4496187 4498098 . + . ID=gene4439;Name=SH03_RS22245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SH03_RS22245;pseudo=true NZ_CP010441.1 Protein Homology CDS 4496187 4498098 . + 0 ID=cds4331;Parent=gene4439;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIC forms the translocation channel and contains the specific substrate-binding site%3B subunit IIA is phosphorylated and transfers the phosphoryl group to the IIB subunit%3B subunit IIB transfers the phosphoryl group to the substrate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=PTS mannitol transporter subunit IICBA;pseudo=true;transl_table=11 NZ_CP010441.1 RefSeq gene 4498328 4499476 . + . ID=gene4440;Name=SH03_RS22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22250;old_locus_tag=SH03_22260 NZ_CP010441.1 Protein Homology CDS 4498328 4499476 . + 0 ID=cds4332;Parent=gene4440;Dbxref=Genbank:WP_000645439.1;Name=WP_000645439.1;gbkey=CDS;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_000645439.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4499473 4500063 . + . ID=gene4441;Name=SH03_RS22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22255;old_locus_tag=SH03_22265 NZ_CP010441.1 Protein Homology CDS 4499473 4500063 . + 0 ID=cds4333;Parent=gene4441;Dbxref=Genbank:WP_032082767.1;Name=WP_032082767.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_032082767.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4500075 4500284 . - . ID=gene4442;Name=SH03_RS22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22260;old_locus_tag=SH03_22270 NZ_CP010441.1 Protein Homology CDS 4500075 4500284 . - 0 ID=cds4334;Parent=gene4442;Dbxref=Genbank:WP_000517100.1;Name=WP_000517100.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000517100.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4500569 4500931 . + . ID=gene4443;Name=SH03_RS22265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22265;old_locus_tag=SH03_22275 NZ_CP010441.1 Protein Homology CDS 4500569 4500931 . + 0 ID=cds4335;Parent=gene4443;Dbxref=Genbank:WP_000665680.1;Name=WP_000665680.1;gbkey=CDS;product=DUF2810 domain-containing protein;protein_id=WP_000665680.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4501303 4502958 . + . ID=gene4444;Name=SH03_RS22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22270;old_locus_tag=SH03_22280 NZ_CP010441.1 Protein Homology CDS 4501303 4502958 . + 0 ID=cds4336;Parent=gene4444;Dbxref=Genbank:WP_001295233.1;Name=WP_001295233.1;gbkey=CDS;product=L-lactate permease;protein_id=WP_001295233.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4502958 4503734 . + . ID=gene4445;Name=SH03_RS22275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22275;old_locus_tag=SH03_22285 NZ_CP010441.1 Protein Homology CDS 4502958 4503734 . + 0 ID=cds4337;Parent=gene4445;Dbxref=Genbank:WP_000636500.1;Name=WP_000636500.1;Note=represses the lctPRD operon;gbkey=CDS;product=dual role activator/repressor for lldPRD operon;protein_id=WP_000636500.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4503731 4504921 . + . ID=gene4446;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=SH03_RS22280;old_locus_tag=SH03_22290 NZ_CP010441.1 Protein Homology CDS 4503731 4504921 . + 0 ID=cds4338;Parent=gene4446;Dbxref=Genbank:WP_000586962.1;Name=WP_000586962.1;Note=flavin mononucleotide-dependent dehydrogenase%3B functions in aerobic respiration and also has a role in anaerobic nitrate respiration;gbkey=CDS;gene=lldD;product=lactate dehydrogenase;protein_id=WP_000586962.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4505119 4505592 . + . ID=gene4447;Name=SH03_RS22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22285;old_locus_tag=SH03_22295 NZ_CP010441.1 Protein Homology CDS 4505119 4505592 . + 0 ID=cds4339;Parent=gene4447;Dbxref=Genbank:WP_000932347.1;Name=WP_000932347.1;Note=member of the SPOUT superfamily of RNA methyltransferases;gbkey=CDS;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_000932347.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4505645 4506466 . - . ID=gene4448;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=SH03_RS22290;old_locus_tag=SH03_22300 NZ_CP010441.1 Protein Homology CDS 4505645 4506466 . - 0 ID=cds4340;Parent=gene4448;Dbxref=Genbank:WP_001277561.1;Name=WP_001277561.1;Note=catalyzes the O-acetylation of serine;gbkey=CDS;gene=cysE;product=serine acetyltransferase;protein_id=WP_001277561.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4506546 4507565 . - . ID=gene4449;Name=SH03_RS22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22295;old_locus_tag=SH03_22305 NZ_CP010441.1 Protein Homology CDS 4506546 4507565 . - 0 ID=cds4341;Parent=gene4449;Dbxref=Genbank:WP_001076194.1;Name=WP_001076194.1;gbkey=CDS;product=glycerol-3-phosphate dehydrogenase [NAD(P)+];protein_id=WP_001076194.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4507565 4508032 . - . ID=gene4450;Name=SH03_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22300;old_locus_tag=SH03_22310 NZ_CP010441.1 Protein Homology CDS 4507565 4508032 . - 0 ID=cds4342;Parent=gene4450;Dbxref=Genbank:WP_038432697.1;Name=WP_038432697.1;Note=molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA;gbkey=CDS;product=preprotein translocase subunit SecB;protein_id=WP_038432697.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4508095 4508346 . - . ID=gene4451;Name=SH03_RS22305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22305;old_locus_tag=SH03_22315 NZ_CP010441.1 Protein Homology CDS 4508095 4508346 . - 0 ID=cds4343;Parent=gene4451;Dbxref=Genbank:WP_000024392.1;Name=WP_000024392.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_000024392.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4508488 4508919 . - . ID=gene4452;Name=SH03_RS22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22310;old_locus_tag=SH03_22320 NZ_CP010441.1 Protein Homology CDS 4508488 4508919 . - 0 ID=cds4344;Parent=gene4452;Dbxref=Genbank:WP_001156181.1;Name=WP_001156181.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001156181.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4508947 4509057 . - . ID=gene4453;Name=SH03_RS22315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22315;old_locus_tag=SH03_22325 NZ_CP010441.1 Protein Homology CDS 4508947 4509057 . - 0 ID=cds4345;Parent=gene4453;Dbxref=Genbank:WP_001113042.1;Name=WP_001113042.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001113042.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4509164 4510708 . + . ID=gene4454;Name=SH03_RS22320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22320;old_locus_tag=SH03_22330 NZ_CP010441.1 Protein Homology CDS 4509164 4510708 . + 0 ID=cds4346;Parent=gene4454;Dbxref=Genbank:WP_001350558.1;Name=WP_001350558.1;Note=catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate;gbkey=CDS;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_001350558.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4510718 4512001 . + . ID=gene4455;Name=SH03_RS22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22325;old_locus_tag=SH03_22335 NZ_CP010441.1 Protein Homology CDS 4510718 4512001 . + 0 ID=cds4347;Parent=gene4455;Dbxref=Genbank:WP_001214147.1;Name=WP_001214147.1;gbkey=CDS;product=peptidase M37;protein_id=WP_001214147.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4512005 4512964 . + . ID=gene4456;Name=SH03_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22330;old_locus_tag=SH03_22340 NZ_CP010441.1 Protein Homology CDS 4512005 4512964 . + 0 ID=cds4348;Parent=gene4456;Dbxref=Genbank:WP_000483847.1;Name=WP_000483847.1;gbkey=CDS;product=polysaccharide deacetylase;protein_id=WP_000483847.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4512951 4513985 . - . ID=gene4457;Name=SH03_RS22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22335;old_locus_tag=SH03_22345 NZ_CP010441.1 Protein Homology CDS 4512951 4513985 . - 0 ID=cds4349;Parent=gene4457;Dbxref=Genbank:WP_000982115.1;Name=WP_000982115.1;gbkey=CDS;product=LPS(HepIII)-glucuronic acid glycosyltransferase;protein_id=WP_000982115.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4514224 4515249 . - . ID=gene4458;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=SH03_RS22340;old_locus_tag=SH03_22350 NZ_CP010441.1 Protein Homology CDS 4514224 4515249 . - 0 ID=cds4350;Parent=gene4458;Dbxref=Genbank:WP_000646007.1;Name=WP_000646007.1;Note=converts threonine and NAD to 1%2C2-amino-3-oxobutanoate and NADH%3B functions in threonine catabolism;gbkey=CDS;gene=tdh;product=l-threonine 3-dehydrogenase;protein_id=WP_000646007.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4515259 4516455 . - . ID=gene4459;Name=SH03_RS22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22345;old_locus_tag=SH03_22355 NZ_CP010441.1 Protein Homology CDS 4515259 4516455 . - 0 ID=cds4351;Parent=gene4459;Dbxref=Genbank:WP_001213834.1;Name=WP_001213834.1;Note=catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine;gbkey=CDS;product=2-amino-3-ketobutyrate CoA ligase;protein_id=WP_001213834.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4516730 4517587 . - . ID=gene4460;Name=SH03_RS22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22350;old_locus_tag=SH03_22360 NZ_CP010441.1 Protein Homology CDS 4516730 4517587 . - 0 ID=cds4352;Parent=gene4460;Dbxref=Genbank:WP_000842820.1;Name=WP_000842820.1;gbkey=CDS;product=protein HtrL;protein_id=WP_000842820.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4517891 4518823 . + . ID=gene4461;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=SH03_RS22355;old_locus_tag=SH03_22365 NZ_CP010441.1 Protein Homology CDS 4517891 4518823 . + 0 ID=cds4353;Parent=gene4461;Dbxref=Genbank:WP_000587764.1;Name=WP_000587764.1;Note=catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose;gbkey=CDS;gene=rfaD;product=ADP-L-glycero-D-manno-heptose-6-epimerase;protein_id=WP_000587764.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4518833 4519879 . + . ID=gene4462;Name=SH03_RS22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22360;old_locus_tag=SH03_22370 NZ_CP010441.1 Protein Homology CDS 4518833 4519879 . + 0 ID=cds4354;Parent=gene4462;Dbxref=Genbank:WP_000699219.1;Name=WP_000699219.1;Note=catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core;gbkey=CDS;product=ADP-heptose--LPS heptosyltransferase 2;protein_id=WP_000699219.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4519883 4520842 . + . ID=gene4463;Name=SH03_RS22365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22365;old_locus_tag=SH03_22375 NZ_CP010441.1 Protein Homology CDS 4519883 4520842 . + 0 ID=cds4355;Parent=gene4463;Dbxref=Genbank:WP_001264584.1;Name=WP_001264584.1;gbkey=CDS;product=LPS heptosyltransferase 1;protein_id=WP_001264584.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4520852 4522111 . + . ID=gene4464;Name=SH03_RS22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22370;old_locus_tag=SH03_22380 NZ_CP010441.1 Protein Homology CDS 4520852 4522111 . + 0 ID=cds4356;Parent=gene4464;Dbxref=Genbank:WP_001395405.1;Name=WP_001395405.1;gbkey=CDS;product=O-antigen ligase;protein_id=WP_001395405.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4522143 4523216 . - . ID=gene4465;Name=SH03_RS22375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22375;old_locus_tag=SH03_22385 NZ_CP010441.1 Protein Homology CDS 4522143 4523216 . - 0 ID=cds4357;Parent=gene4465;Dbxref=Genbank:WP_001236433.1;Name=WP_001236433.1;gbkey=CDS;product=LPS 1%2C2-N-acetylglucosaminetransferase;protein_id=WP_001236433.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4523249 4524100 . - . ID=gene4466;Name=SH03_RS22380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22380;old_locus_tag=SH03_22390 NZ_CP010441.1 Protein Homology CDS 4523249 4524100 . - 0 ID=cds4358;Parent=gene4466;Dbxref=Genbank:WP_000790279.1;Name=WP_000790279.1;gbkey=CDS;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;protein_id=WP_000790279.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4524171 4524869 . - . ID=gene4467;Name=SH03_RS22385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22385;old_locus_tag=SH03_22395 NZ_CP010441.1 Protein Homology CDS 4524171 4524869 . - 0 ID=cds4359;Parent=gene4467;Dbxref=Genbank:WP_038432700.1;Name=WP_038432700.1;Note=catalyzes the phosphorylation of heptose(II) of the outer membrane lipopolysaccharide core;gbkey=CDS;product=LPS core heptose(II) kinase RfaY;protein_id=WP_038432700.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4524887 4525903 . - . ID=gene4468;Name=SH03_RS22390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22390;old_locus_tag=SH03_22400 NZ_CP010441.1 Protein Homology CDS 4524887 4525903 . - 0 ID=cds4360;Parent=gene4468;Dbxref=Genbank:WP_000376841.1;Name=WP_000376841.1;gbkey=CDS;product=LPS 1%2C2-glucosyltransferase;protein_id=WP_000376841.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4525943 4526962 . - . ID=gene4469;Name=SH03_RS22395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22395;old_locus_tag=SH03_22405 NZ_CP010441.1 Protein Homology CDS 4525943 4526962 . - 0 ID=cds4361;Parent=gene4469;Dbxref=Genbank:WP_001188013.1;Name=WP_001188013.1;gbkey=CDS;product=LPS 1%2C3-galactosyltransferase;protein_id=WP_001188013.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4526962 4528041 . - . ID=gene4470;Name=SH03_RS22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22400;old_locus_tag=SH03_22410 NZ_CP010441.1 Protein Homology CDS 4526962 4528041 . - 0 ID=cds4362;Parent=gene4470;Dbxref=Genbank:WP_000683964.1;Name=WP_000683964.1;gbkey=CDS;product=LPS 1%2C6-galactosyltransferase;protein_id=WP_000683964.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4528085 4529020 . - . ID=gene4471;Name=SH03_RS22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22405;old_locus_tag=SH03_22415 NZ_CP010441.1 Protein Homology CDS 4528085 4529020 . - 0 ID=cds4363;Parent=gene4471;Dbxref=Genbank:WP_000158225.1;Name=WP_000158225.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_000158225.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4529057 4529854 . - . ID=gene4472;Name=SH03_RS22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22410;old_locus_tag=SH03_22420 NZ_CP010441.1 Protein Homology CDS 4529057 4529854 . - 0 ID=cds4364;Parent=gene4472;Dbxref=Genbank:WP_000229840.1;Name=WP_000229840.1;Note=catalyzes the phosphorylation of heptose I in the lipopolysaccharide core;gbkey=CDS;product=LPS core heptose(I) kinase RfaP;protein_id=WP_000229840.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4529847 4530971 . - . ID=gene4473;Name=SH03_RS22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22415;old_locus_tag=SH03_22425 NZ_CP010441.1 Protein Homology CDS 4529847 4530971 . - 0 ID=cds4365;Parent=gene4473;Dbxref=Genbank:WP_000634283.1;Name=WP_000634283.1;Note=catalyzes the addition of the first glucose residue to the LPS core;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_000634283.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4530968 4532002 . - . ID=gene4474;Name=SH03_RS22420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22420;old_locus_tag=SH03_22430 NZ_CP010441.1 Protein Homology CDS 4530968 4532002 . - 0 ID=cds4366;Parent=gene4474;Dbxref=Genbank:WP_001268851.1;Name=WP_001268851.1;Note=catalyzes the transfer of heptose(III) to heptose(II) in the lipopolysaccharide inner core;gbkey=CDS;product=LPS core heptosyltransferase RfaQ;protein_id=WP_001268851.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4532444 4533721 . + . ID=gene4475;Name=SH03_RS22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22425;old_locus_tag=SH03_22435 NZ_CP010441.1 Protein Homology CDS 4532444 4533721 . + 0 ID=cds4367;Parent=gene4475;Dbxref=Genbank:WP_000891564.1;Name=WP_000891564.1;Note=catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A;gbkey=CDS;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_000891564.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4533729 4534208 . + . ID=gene4476;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=SH03_RS22430;old_locus_tag=SH03_22440 NZ_CP010441.1 Protein Homology CDS 4533729 4534208 . + 0 ID=cds4368;Parent=gene4476;Dbxref=Genbank:WP_001171866.1;Name=WP_001171866.1;Note=Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA;gbkey=CDS;gene=coaD;product=phosphopantetheine adenylyltransferase;protein_id=WP_001171866.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4534247 4535056 . - . ID=gene4477;Name=SH03_RS22435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22435;old_locus_tag=SH03_22445 NZ_CP010441.1 Protein Homology CDS 4534247 4535056 . - 0 ID=cds4369;Parent=gene4477;Dbxref=Genbank:WP_001114543.1;Name=WP_001114543.1;Note=Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases;gbkey=CDS;product=formamidopyrimidine-DNA glycosylase;protein_id=WP_001114543.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4535154 4535321 . - . ID=gene4478;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=SH03_RS22440;old_locus_tag=SH03_22450 NZ_CP010441.1 Protein Homology CDS 4535154 4535321 . - 0 ID=cds4370;Parent=gene4478;Dbxref=Genbank:WP_001051798.1;Name=WP_001051798.1;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;gbkey=CDS;gene=rpmG;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4535342 4535578 . - . ID=gene4479;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=SH03_RS22445;old_locus_tag=SH03_22455 NZ_CP010441.1 Protein Homology CDS 4535342 4535578 . - 0 ID=cds4371;Parent=gene4479;Dbxref=Genbank:WP_000091955.1;Name=WP_000091955.1;Note=required for 70S ribosome assembly;gbkey=CDS;gene=rpmB;product=50S ribosomal protein L28;protein_id=WP_000091955.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4535795 4536463 . - . ID=gene4480;Name=SH03_RS22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22450;old_locus_tag=SH03_22460 NZ_CP010441.1 Protein Homology CDS 4535795 4536463 . - 0 ID=cds4372;Parent=gene4480;Dbxref=Genbank:WP_001350561.1;Name=WP_001350561.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001350561.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4536635 4537855 . + . ID=gene4481;Name=SH03_RS22455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22455;old_locus_tag=SH03_22465 NZ_CP010441.1 Protein Homology CDS 4536635 4537855 . + 0 ID=cds4373;Parent=gene4481;Dbxref=Genbank:WP_000050139.1;Name=WP_000050139.1;Note=catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4'-phosphopantotheine;gbkey=CDS;product=CoA biosynthesis bifunctional protein CoaBC;protein_id=WP_000050139.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4537833 4538291 . + . ID=gene4482;Name=SH03_RS22460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22460;old_locus_tag=SH03_22470 NZ_CP010441.1 Protein Homology CDS 4537833 4538291 . + 0 ID=cds4374;Parent=gene4482;Dbxref=Genbank:WP_000976073.1;Name=WP_000976073.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=WP_000976073.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4538398 4538994 . + . ID=gene4483;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;gene_synonym=ttk;locus_tag=SH03_RS22465;old_locus_tag=SH03_22475 NZ_CP010441.1 Protein Homology CDS 4538398 4538994 . + 0 ID=cds4375;Parent=gene4483;Dbxref=Genbank:WP_000818601.1;Name=WP_000818601.1;Note=FtsZ binding protein%3B synthetically lethal with a defect in the Min system%3B this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly;gbkey=CDS;gene=slmA;product=nucleoid occlusion factor SlmA;protein_id=WP_000818601.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4539031 4539672 . - . ID=gene4484;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=SH03_RS22470;old_locus_tag=SH03_22480 NZ_CP010441.1 Protein Homology CDS 4539031 4539672 . - 0 ID=cds4376;Parent=gene4484;Dbxref=Genbank:WP_000806177.1;Name=WP_000806177.1;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=pyrE;product=orotate phosphoribosyltransferase;protein_id=WP_000806177.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4539738 4540454 . - . ID=gene4485;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=SH03_RS22475;old_locus_tag=SH03_22485 NZ_CP010441.1 Protein Homology CDS 4539738 4540454 . - 0 ID=cds4377;Parent=gene4485;Dbxref=Genbank:WP_001247096.1;Name=WP_001247096.1;Note=RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3'-5' exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs;gbkey=CDS;gene=rph;product=ribonuclease PH;protein_id=WP_001247096.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4540581 4541444 . + . ID=gene4486;Name=SH03_RS22480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22480;old_locus_tag=SH03_22490 NZ_CP010441.1 Protein Homology CDS 4540581 4541444 . + 0 ID=cds4378;Parent=gene4486;Dbxref=Genbank:WP_000621340.1;Name=WP_000621340.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000621340.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4541665 4542489 . + . ID=gene4487;Name=dinD;gbkey=Gene;gene=dinD;gene_biotype=protein_coding;locus_tag=SH03_RS22485;old_locus_tag=SH03_22495 NZ_CP010441.1 Protein Homology CDS 4541665 4542489 . + 0 ID=cds4379;Parent=gene4487;Dbxref=Genbank:WP_001350563.1;Name=WP_001350563.1;gbkey=CDS;gene=dinD;product=DNA-damage-inducible protein D;protein_id=WP_001350563.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4542779 4543396 . + . ID=gene4488;Name=SH03_RS22490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22490;old_locus_tag=SH03_22500 NZ_CP010441.1 Protein Homology CDS 4542779 4543396 . + 0 ID=cds4380;Parent=gene4488;Dbxref=Genbank:WP_000924289.1;Name=WP_000924289.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000924289.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4543393 4545075 . - . ID=gene4489;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;gene_synonym=yicF;locus_tag=SH03_RS22495;old_locus_tag=SH03_22505 NZ_CP010441.1 Protein Homology CDS 4543393 4545075 . - 0 ID=cds4381;Parent=gene4489;Dbxref=Genbank:WP_000870036.1;Name=WP_000870036.1;Note=this ligase is similar to LigA but it lacks the C-terminal BRCT domain%3B catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+;gbkey=CDS;gene=ligB;product=DNA ligase B;protein_id=WP_000870036.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4545333 4545956 . + . ID=gene4490;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=SH03_RS22500;old_locus_tag=SH03_22510 NZ_CP010441.1 Protein Homology CDS 4545333 4545956 . + 0 ID=cds4382;Parent=gene4490;Dbxref=Genbank:WP_001295237.1;Name=WP_001295237.1;Note=Essential for recycling GMP and indirectly%2C cGMP;gbkey=CDS;gene=gmk;product=guanylate kinase;protein_id=WP_001295237.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4546011 4546286 . + . ID=gene4491;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=SH03_RS22505;old_locus_tag=SH03_22515 NZ_CP010441.1 Protein Homology CDS 4546011 4546286 . + 0 ID=cds4383;Parent=gene4491;Dbxref=Genbank:WP_000135058.1;Name=WP_000135058.1;Note=Promotes RNA polymerase assembly%3B latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits;gbkey=CDS;gene=rpoZ;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4546305 4548413 . + . ID=gene4492;Name=SH03_RS22510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22510;old_locus_tag=SH03_22520 NZ_CP010441.1 Protein Homology CDS 4546305 4548413 . + 0 ID=cds4384;Parent=gene4492;Dbxref=Genbank:WP_000280488.1;Name=WP_000280488.1;gbkey=CDS;product=bifunctional (p)ppGpp synthetase II/ guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280488.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4548420 4549109 . + . ID=gene4493;Name=SH03_RS22515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22515;old_locus_tag=SH03_22525 NZ_CP010441.1 Protein Homology CDS 4548420 4549109 . + 0 ID=cds4385;Parent=gene4493;Dbxref=Genbank:WP_001070177.1;Name=WP_001070177.1;Note=specifically modifies tRNA at position G18;gbkey=CDS;product=tRNA (guanosine(18)-2'-O)-methyltransferase;protein_id=WP_001070177.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4549115 4551196 . + . ID=gene4494;Name=SH03_RS22520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22520;old_locus_tag=SH03_22530 NZ_CP010441.1 Protein Homology CDS 4549115 4551196 . + 0 ID=cds4386;Parent=gene4494;Dbxref=Genbank:WP_000678419.1;Name=WP_000678419.1;Note=catalyzes branch migration in Holliday junction intermediates;gbkey=CDS;product=ATP-dependent DNA helicase RecG;protein_id=WP_000678419.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4551365 4552570 . - . ID=gene4495;Name=SH03_RS22525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22525;old_locus_tag=SH03_22535 NZ_CP010441.1 Protein Homology CDS 4551365 4552570 . - 0 ID=cds4387;Parent=gene4495;Dbxref=Genbank:WP_000468833.1;Name=WP_000468833.1;Note=is involved with the sodium-dependent uptake of glutamate;gbkey=CDS;product=sodium/glutamate symport carrier protein;protein_id=WP_000468833.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4552850 4554241 . + . ID=gene4496;Name=SH03_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22530;old_locus_tag=SH03_22540 NZ_CP010441.1 Protein Homology CDS 4552850 4554241 . + 0 ID=cds4388;Parent=gene4496;Dbxref=Genbank:WP_001295238.1;Name=WP_001295238.1;Note=high-affinity transporter for xanthine;gbkey=CDS;product=xanthine permease XanP;protein_id=WP_001295238.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4554362 4556071 . + . ID=gene4497;Name=SH03_RS22535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22535;old_locus_tag=SH03_22545 NZ_CP010441.1 Protein Homology CDS 4554362 4556071 . + 0 ID=cds4389;Parent=gene4497;Dbxref=Genbank:WP_001300954.1;Name=WP_001300954.1;gbkey=CDS;product=AsmA family protein;protein_id=WP_001300954.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4556124 4558442 . - . ID=gene4498;Name=SH03_RS22540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22540;old_locus_tag=SH03_22550 NZ_CP010441.1 Protein Homology CDS 4556124 4558442 . - 0 ID=cds4390;Parent=gene4498;Dbxref=Genbank:WP_000702898.1;Name=WP_000702898.1;Note=catalyzes the transfer of alpha-xylosyl residue;gbkey=CDS;product=alpha-xylosidase;protein_id=WP_000702898.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4558452 4559834 . - . ID=gene4499;Name=SH03_RS22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22545;old_locus_tag=SH03_22555 NZ_CP010441.1 Protein Homology CDS 4558452 4559834 . - 0 ID=cds4391;Parent=gene4499;Dbxref=Genbank:WP_000834439.1;Name=WP_000834439.1;Note=may be involved in the transport of galactosides-pentoses-hexuronides;gbkey=CDS;product=inner membrane symporter YicJ;protein_id=WP_000834439.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4560127 4560221 . + . ID=gene4500;Name=SH03_RS22550;gbkey=Gene;gene_biotype=tRNA;locus_tag=SH03_RS22550;old_locus_tag=SH03_22560 NZ_CP010441.1 tRNAscan-SE tRNA 4560127 4560221 . + . ID=rna108;Parent=gene4500;anticodon=(pos:4560161..4560163);gbkey=tRNA;product=tRNA-Sec NZ_CP010441.1 tRNAscan-SE exon 4560127 4560221 . + . ID=id237;Parent=rna108;anticodon=(pos:4560161..4560163);gbkey=tRNA;product=tRNA-Sec NZ_CP010441.1 RefSeq gene 4560330 4560476 . + . ID=gene4501;Name=SH03_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22555;old_locus_tag=SH03_22565 NZ_CP010441.1 Protein Homology CDS 4560330 4560476 . + 0 ID=cds4392;Parent=gene4501;Dbxref=Genbank:WP_001315909.1;Name=WP_001315909.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001315909.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4560858 4562042 . + . ID=gene4502;Name=SH03_RS22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22560;old_locus_tag=SH03_22570 NZ_CP010441.1 Protein Homology CDS 4560858 4562042 . + 0 ID=cds4393;Parent=gene4502;Dbxref=Genbank:WP_001172878.1;Name=WP_001172878.1;gbkey=CDS;product=sugar efflux transporter C;protein_id=WP_001172878.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4562153 4563076 . + . ID=gene4503;Name=SH03_RS22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22565;old_locus_tag=SH03_22575 NZ_CP010441.1 Protein Homology CDS 4562153 4563076 . + 0 ID=cds4394;Parent=gene4503;Dbxref=Genbank:WP_000535961.1;Name=WP_000535961.1;gbkey=CDS;product=transporter;protein_id=WP_000535961.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4563080 4563898 . - . ID=gene4504;Name=SH03_RS22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22570;old_locus_tag=SH03_22580 NZ_CP010441.1 Protein Homology CDS 4563080 4563898 . - 0 ID=cds4395;Parent=gene4504;Dbxref=Genbank:WP_000779426.1;Name=WP_000779426.1;gbkey=CDS;product=lipoprotein 28;protein_id=WP_000779426.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4563996 4564115 . + . ID=gene4505;Name=SH03_RS22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22575;old_locus_tag=SH03_22585 NZ_CP010441.1 Protein Homology CDS 4563996 4564115 . + 0 ID=cds4396;Parent=gene4505;Dbxref=Genbank:WP_000456043.1;Name=WP_000456043.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000456043.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4564120 4564413 . + . ID=gene4506;Name=SH03_RS22580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22580;old_locus_tag=SH03_22590 NZ_CP010441.1 Protein Homology CDS 4564120 4564413 . + 0 ID=cds4397;Parent=gene4506;Dbxref=Genbank:WP_000805509.1;Name=WP_000805509.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000805509.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4564454 4565644 . - . ID=gene4507;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;gene_synonym=yicM;locus_tag=SH03_RS22585;old_locus_tag=SH03_22595 NZ_CP010441.1 Protein Homology CDS 4564454 4565644 . - 0 ID=cds4398;Parent=gene4507;Dbxref=Genbank:WP_001288549.1;Name=WP_001288549.1;Note=experimental results in Escherichia coli suggest that this gene encodes an inosine export protein%3B member of major facilitator superfamily%3B MFS;gbkey=CDS;gene=nepI;product=purine ribonucleoside efflux pump NepI;protein_id=WP_001288549.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4565855 4566307 . - . ID=gene4508;Name=SH03_RS22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22590;old_locus_tag=SH03_22600 NZ_CP010441.1 Protein Homology CDS 4565855 4566307 . - 0 ID=cds4399;Parent=gene4508;Dbxref=Genbank:WP_001295241.1;Name=WP_001295241.1;gbkey=CDS;product=DUF1198 domain-containing protein;protein_id=WP_001295241.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4566360 4567772 . - . ID=gene4509;Name=SH03_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22595;old_locus_tag=SH03_22605 NZ_CP010441.1 Protein Homology CDS 4566360 4567772 . - 0 ID=cds4400;Parent=gene4509;Dbxref=Genbank:WP_000584172.1;Name=WP_000584172.1;Note=involved in the transport or adenine;gbkey=CDS;product=adenine permease;protein_id=WP_000584172.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4567869 4569635 . + . ID=gene4510;Name=SH03_RS22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22600;old_locus_tag=SH03_22610 NZ_CP010441.1 Protein Homology CDS 4567869 4569635 . + 0 ID=cds4401;Parent=gene4510;Dbxref=Genbank:WP_001065718.1;Name=WP_001065718.1;Note=catalyzes the formation of hypoxanthine from adenine%3B in E. coli this activity has been detected in mutant strains but not in wild type;gbkey=CDS;product=adenine deaminase;protein_id=WP_001065718.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4569681 4571072 . - . ID=gene4511;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=SH03_RS22605;old_locus_tag=SH03_22615 NZ_CP010441.1 Protein Homology CDS 4569681 4571072 . - 0 ID=cds4402;Parent=gene4511;Dbxref=Genbank:WP_000879194.1;Name=WP_000879194.1;Note=cytoplasmic membrane protein that functions as a monomer%3B catalyzes the active transport of sugar-phosphates such as glucose-6-phosphate with the obligatory exchange of inorganic phosphate or organophosphate;gbkey=CDS;gene=uhpT;product=hexose phosphate transporter;protein_id=WP_000879194.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4571210 4572529 . - . ID=gene4512;Name=SH03_RS22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22610;old_locus_tag=SH03_22620 NZ_CP010441.1 Protein Homology CDS 4571210 4572529 . - 0 ID=cds4403;Parent=gene4512;Dbxref=Genbank:WP_000936566.1;Name=WP_000936566.1;Note=membrane protein regulates uhpT expression;gbkey=CDS;product=regulatory protein UhpC;protein_id=WP_000936566.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4572539 4574041 . - . ID=gene4513;Name=SH03_RS22615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22615;old_locus_tag=SH03_22625 NZ_CP010441.1 Protein Homology CDS 4572539 4574041 . - 0 ID=cds4404;Parent=gene4513;Dbxref=Genbank:WP_001295243.1;Name=WP_001295243.1;Note=Member of the two-component regulatory system UhpB/UhpA involved in the regulation of the uptake of hexose ph;gbkey=CDS;product=sensor protein UhpB;protein_id=WP_001295243.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4574041 4574631 . - . ID=gene4514;Name=SH03_RS22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22620;old_locus_tag=SH03_22630 NZ_CP010441.1 Protein Homology CDS 4574041 4574631 . - 0 ID=cds4405;Parent=gene4514;Dbxref=Genbank:WP_000633668.1;Name=WP_000633668.1;Note=response regulator in two-component regulatory system wtih UhpB%3B phosphorylated UhpA is a positive activator uhpT%2C a hexose phosphates transporter;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000633668.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4574707 4574997 . - . ID=gene4515;Name=SH03_RS22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22625;old_locus_tag=SH03_22635 NZ_CP010441.1 Protein Homology CDS 4574707 4574997 . - 0 ID=cds4406;Parent=gene4515;Dbxref=Genbank:WP_001181706.1;Name=WP_001181706.1;Note=with IlvB catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase small subunit;gbkey=CDS;product=acetolactate synthase isozyme 1 small subunit;protein_id=WP_001181706.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4575001 4576689 . - . ID=gene4516;Name=SH03_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22630;old_locus_tag=SH03_22640 NZ_CP010441.1 Protein Homology CDS 4575001 4576689 . - 0 ID=cds4407;Parent=gene4516;Dbxref=Genbank:WP_000168475.1;Name=WP_000168475.1;gbkey=CDS;product=acetolactate synthase isozyme 1 large subunit;protein_id=WP_000168475.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4576795 4576893 . - . ID=gene4517;Name=SH03_RS22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22635;old_locus_tag=SH03_22645 NZ_CP010441.1 Protein Homology CDS 4576795 4576893 . - 0 ID=cds4408;Parent=gene4517;Dbxref=Genbank:WP_001300753.1;Name=WP_001300753.1;gbkey=CDS;product=IlvBN operon leader peptide;protein_id=WP_001300753.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4576880 4577170 . + . ID=gene4518;Name=SH03_RS22640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22640;old_locus_tag=SH03_22650 NZ_CP010441.1 Protein Homology CDS 4576880 4577170 . + 0 ID=cds4409;Parent=gene4518;Dbxref=Genbank:WP_000454295.1;Name=WP_000454295.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000454295.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4577167 4577325 . + . ID=gene4519;Name=SH03_RS22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22645;old_locus_tag=SH03_22655 NZ_CP010441.1 Protein Homology CDS 4577167 4577325 . + 0 ID=cds4410;Parent=gene4519;Dbxref=Genbank:WP_001308150.1;Name=WP_001308150.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001308150.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4577458 4577547 . + . ID=gene4520;Name=SH03_RS22650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22650;old_locus_tag=SH03_22660 NZ_CP010441.1 Protein Homology CDS 4577458 4577547 . + 0 ID=cds4411;Parent=gene4520;Dbxref=Genbank:WP_001054909.1;Name=WP_001054909.1;gbkey=CDS;product=small toxic protein TisB;protein_id=WP_001054909.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4577827 4579011 . + . ID=gene4521;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=SH03_RS22655;old_locus_tag=SH03_22665 NZ_CP010441.1 Protein Homology CDS 4577827 4579011 . + 0 ID=cds4412;Parent=gene4521;Dbxref=Genbank:WP_000828746.1;Name=WP_000828746.1;Note=multidrug efflux protein involved in adaptation to low energy shock;gbkey=CDS;gene=emrD;product=multidrug resistance protein D;protein_id=WP_000828746.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4579019 4579516 . - . ID=gene4522;Name=SH03_RS22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22660;old_locus_tag=SH03_22670 NZ_CP010441.1 Protein Homology CDS 4579019 4579516 . - 0 ID=cds4413;Parent=gene4522;Dbxref=Genbank:WP_000148061.1;Name=WP_000148061.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000148061.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4579513 4579875 . - . ID=gene4523;Name=SH03_RS22665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22665;old_locus_tag=SH03_22675 NZ_CP010441.1 Protein Homology CDS 4579513 4579875 . - 0 ID=cds4414;Parent=gene4523;Dbxref=Genbank:WP_001113432.1;Name=WP_001113432.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001113432.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4579865 4580212 . - . ID=gene4524;Name=SH03_RS22670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22670;old_locus_tag=SH03_22680 NZ_CP010441.1 Protein Homology CDS 4579865 4580212 . - 0 ID=cds4415;Parent=gene4524;Dbxref=Genbank:WP_000703959.1;Name=WP_000703959.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000703959.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4580320 4580769 . + . ID=gene4525;Name=SH03_RS22675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22675;old_locus_tag=SH03_22685 NZ_CP010441.1 Protein Homology CDS 4580320 4580769 . + 0 ID=cds4416;Parent=gene4525;Dbxref=Genbank:WP_000511289.1;Name=WP_000511289.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000511289.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4580816 4582309 . - . ID=gene4526;Name=SH03_RS22680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22680;old_locus_tag=SH03_22690 NZ_CP010441.1 Protein Homology CDS 4580816 4582309 . - 0 ID=cds4417;Parent=gene4526;Dbxref=Genbank:WP_000828527.1;Name=WP_000828527.1;gbkey=CDS;product=sulfatase/phosphatase superfamily protein;protein_id=WP_000828527.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4582306 4584021 . - . ID=gene4527;Name=SH03_RS22685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22685;old_locus_tag=SH03_22695 NZ_CP010441.1 Protein Homology CDS 4582306 4584021 . - 0 ID=cds4418;Parent=gene4527;Dbxref=Genbank:WP_001087145.1;Name=WP_001087145.1;Note=uncharacterized member of the SSS superfamily of sodium-dependent solute transporters%3B unknown function;gbkey=CDS;product=transporter;protein_id=WP_001087145.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4584188 4585081 . + . ID=gene4528;Name=SH03_RS22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22690;old_locus_tag=SH03_22700 NZ_CP010441.1 Protein Homology CDS 4584188 4585081 . + 0 ID=cds4419;Parent=gene4528;Dbxref=Genbank:WP_001013540.1;Name=WP_001013540.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_001013540.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4585254 4585892 . - . ID=gene4529;Name=SH03_RS22695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22695;old_locus_tag=SH03_22705 NZ_CP010441.1 Protein Homology CDS 4585254 4585892 . - 0 ID=cds4420;Parent=gene4529;Dbxref=Genbank:WP_001311230.1;Name=WP_001311230.1;gbkey=CDS;product=inactive 6-phospho-alpha-glucosidase;protein_id=WP_001311230.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4585892 4586377 . - . ID=gene4530;Name=SH03_RS22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22700;old_locus_tag=SH03_22710 NZ_CP010441.1 Protein Homology CDS 4585892 4586377 . - 0 ID=cds4421;Parent=gene4530;Dbxref=Genbank:WP_000492410.1;Name=WP_000492410.1;gbkey=CDS;product=phosphotransferase enzyme IIB component GlvB;protein_id=WP_000492410.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4586402 4587508 . - . ID=gene4531;Name=SH03_RS22705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22705;old_locus_tag=SH03_22715 NZ_CP010441.1 Protein Homology CDS 4586402 4587508 . - 0 ID=cds4422;Parent=gene4531;Dbxref=Genbank:WP_000952140.1;Name=WP_000952140.1;gbkey=CDS;product=permease;protein_id=WP_000952140.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4587804 4588520 . + . ID=gene4532;Name=SH03_RS22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22710;old_locus_tag=SH03_22720 NZ_CP010441.1 Protein Homology CDS 4587804 4588520 . + 0 ID=cds4423;Parent=gene4532;Dbxref=Genbank:WP_001300779.1;Name=WP_001300779.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_001300779.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4588517 4590178 . - . ID=gene4533;Name=SH03_RS22715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22715;old_locus_tag=SH03_22725 NZ_CP010441.1 Protein Homology CDS 4588517 4590178 . - 0 ID=cds4424;Parent=gene4533;Dbxref=Genbank:WP_038432704.1;Name=WP_038432704.1;gbkey=CDS;product=transporter;protein_id=WP_038432704.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4590374 4590802 . - . ID=gene4534;Name=SH03_RS22720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22720;old_locus_tag=SH03_22730 NZ_CP010441.1 Protein Homology CDS 4590374 4590802 . - 0 ID=cds4425;Parent=gene4534;Dbxref=Genbank:WP_001243431.1;Name=WP_001243431.1;Note=16 kDa heat shock protein B%3B associates with aggregated proteins%2C together with ibpA%2C to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress%3B ATP-independent;gbkey=CDS;product=heat-shock protein IbpB;protein_id=WP_001243431.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4590914 4591327 . - . ID=gene4535;Name=SH03_RS22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22725;old_locus_tag=SH03_22735 NZ_CP010441.1 Protein Homology CDS 4590914 4591327 . - 0 ID=cds4426;Parent=gene4535;Dbxref=Genbank:WP_001243437.1;Name=WP_001243437.1;Note=with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress;gbkey=CDS;product=heat-shock protein IbpA;protein_id=WP_001243437.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4591705 4591965 . + . ID=gene4536;Name=SH03_RS22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22730;old_locus_tag=SH03_22740 NZ_CP010441.1 Protein Homology CDS 4591705 4591965 . + 0 ID=cds4427;Parent=gene4536;Dbxref=Genbank:WP_000019930.1;Name=WP_000019930.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000019930.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4591967 4593181 . - . ID=gene4537;Name=SH03_RS22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22735;old_locus_tag=SH03_22745 NZ_CP010441.1 Protein Homology CDS 4591967 4593181 . - 0 ID=cds4428;Parent=gene4537;Dbxref=Genbank:WP_001336371.1;Name=WP_001336371.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001336371.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4593282 4594346 . + . ID=gene4538;Name=SH03_RS22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22740;old_locus_tag=SH03_22750 NZ_CP010441.1 Protein Homology CDS 4593282 4594346 . + 0 ID=cds4429;Parent=gene4538;Dbxref=Genbank:WP_001340434.1;Name=WP_001340434.1;Note=FAD/NAD(P)-binding domain;gbkey=CDS;product=protein CbrA;protein_id=WP_001340434.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4594343 4595635 . - . ID=gene4539;Name=SH03_RS22745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22745;old_locus_tag=SH03_22755 NZ_CP010441.1 Protein Homology CDS 4594343 4595635 . - 0 ID=cds4430;Parent=gene4539;Dbxref=Genbank:WP_000354284.1;Name=WP_000354284.1;gbkey=CDS;product=D-galactonate transporter;protein_id=WP_000354284.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4595755 4596903 . - . ID=gene4540;Name=SH03_RS22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22750;old_locus_tag=SH03_22760 NZ_CP010441.1 Protein Homology CDS 4595755 4596903 . - 0 ID=cds4431;Parent=gene4540;Dbxref=Genbank:WP_000705001.1;Name=WP_000705001.1;gbkey=CDS;product=D-galactonate dehydratase 2;protein_id=WP_000705001.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4596900 4597517 . - . ID=gene4541;Name=SH03_RS22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22755;old_locus_tag=SH03_22765 NZ_CP010441.1 Protein Homology CDS 4596900 4597517 . - 0 ID=cds4432;Parent=gene4541;Dbxref=Genbank:WP_001198722.1;Name=WP_001198722.1;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate%3B functions in galactonate metabolism;gbkey=CDS;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_001198722.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4597501 4598379 . - . ID=gene4542;Name=SH03_RS22760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22760;old_locus_tag=SH03_22770 NZ_CP010441.1 Protein Homology CDS 4597501 4598379 . - 0 ID=cds4433;Parent=gene4542;Dbxref=Genbank:WP_000127091.1;Name=WP_000127091.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-galactonate 6-phosphate from 2-dehydro-3-deoxy-D-galactonate;gbkey=CDS;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_000127091.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4598376 4599065 . - . ID=gene4543;Name=SH03_RS22765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22765;old_locus_tag=SH03_22775 NZ_CP010441.1 Protein Homology CDS 4598376 4599065 . - 0 ID=cds4434;Parent=gene4543;Dbxref=Genbank:WP_000174305.1;Name=WP_000174305.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000174305.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4599343 4599999 . + . ID=gene4544;Name=SH03_RS22770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22770;old_locus_tag=SH03_22780 NZ_CP010441.1 Protein Homology CDS 4599343 4599999 . + 0 ID=cds4435;Parent=gene4544;Dbxref=Genbank:WP_000772934.1;Name=WP_000772934.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000772934.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4600045 4600857 . - . ID=gene4545;Name=SH03_RS22775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22775;old_locus_tag=SH03_22785 NZ_CP010441.1 Protein Homology CDS 4600045 4600857 . - 0 ID=cds4436;Parent=gene4545;Dbxref=Genbank:WP_000985549.1;Name=WP_000985549.1;Note=YidA%3B catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate)%2C mannose 1-phosphate and p-nitrophenyl phosphate%3B hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form%3B member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins;gbkey=CDS;product=sugar phosphatase YidA;protein_id=WP_000985549.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4600972 4601370 . - . ID=gene4546;Name=SH03_RS22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22780;old_locus_tag=SH03_22790 NZ_CP010441.1 Protein Homology CDS 4600972 4601370 . - 0 ID=cds4437;Parent=gene4546;Dbxref=Genbank:WP_000522208.1;Name=WP_000522208.1;gbkey=CDS;product=DUF937 domain-containing protein;protein_id=WP_000522208.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4601390 4601590 . - . ID=gene4547;Name=SH03_RS22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22785;old_locus_tag=SH03_22795 NZ_CP010441.1 Protein Homology CDS 4601390 4601590 . - 0 ID=cds4438;Parent=gene4547;Dbxref=Genbank:WP_001347584.1;Name=WP_001347584.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001347584.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4601610 4604024 . - . ID=gene4548;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=SH03_RS22790;old_locus_tag=SH03_22800 NZ_CP010441.1 Protein Homology CDS 4601610 4604024 . - 0 ID=cds4439;Parent=gene4548;Dbxref=Genbank:WP_000072067.1;Name=WP_000072067.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrB;product=DNA gyrase subunit B;protein_id=WP_000072067.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4604053 4605126 . - . ID=gene4549;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=SH03_RS22795;old_locus_tag=SH03_22805 NZ_CP010441.1 Protein Homology CDS 4604053 4605126 . - 0 ID=cds4440;Parent=gene4549;Dbxref=Genbank:WP_000060112.1;Name=WP_000060112.1;Note=Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA;gbkey=CDS;gene=recF;product=DNA recombination protein RecF;protein_id=WP_000060112.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4605126 4606226 . - . ID=gene4550;Name=SH03_RS22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SH03_RS22800;old_locus_tag=SH03_22810 NZ_CP010441.1 Protein Homology CDS 4605126 4606226 . - 0 ID=cds4441;Parent=gene4550;Dbxref=Genbank:WP_000673464.1;Name=WP_000673464.1;Note=binds the polymerase to DNA and acts as a sliding clamp;gbkey=CDS;product=DNA polymerase III subunit beta;protein_id=WP_000673464.1;transl_table=11 NZ_CP010441.1 RefSeq gene 4606231 4607634 . - . ID=gene4551;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=SH03_RS22805;old_locus_tag=SH03_22815 NZ_CP010441.1 Protein Homology CDS 4606231 4607634 . - 0 ID=cds4442;Parent=gene4551;Dbxref=Genbank:WP_000059111.1;Name=WP_000059111.1;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;gbkey=CDS;gene=dnaA;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059111.1;transl_table=11 ###