SH07_RS00015 NONE
SH07_RS00020    3019 ..    3036 + -12.7  -5.83211   TTTCGCTAAAATAAG             GGCGGTC AGTT GACCGCC              TTTTTTCTTTTCGTA 100 51
        trmE    4472 ..    4507 + -15.6  -3.53712   TAAGTAACCGCGCTT    ACGAAGCCGCATTCTGA CTG TCAGA-TGCGGCTTCGC    TTCATTGTTACCACT 100 34
SH07_RS00030    4818 ..    4835 +  -2.1  -4.55209   CAGAGCCAAACCGAT             TAGATTCA ATG TGA-TCTA             TTTGTTTGCTATATC  60 63
        tnaA    6428 ..    6454 +  -8.1  -3.06492   TTAATTAATACTACA         GAGTGGCTA TAAGGATGT TAGCCACTC         TCTTACCCTACATCC  62 37
SH07_RS00040    7764 ..    7786 + -13.5  -3.12351   GGCTAAATCCTTCAA           GAAGCCAGC CATTC GCTGGCTTC           TTGCCTCTCAGGAAA 100 35
SH07_RS00045 NONE
SH07_RS00050   10101 ..   10112 +    -3  -3.44124   CTGTCCATCATTCCA                GTAA ATGA TTAC                 TCTTGTATTCATAAT  49 131
SH07_RS00055 NONE
SH07_RS00060   11498 ..   11522 + -12.2  -4.57837   GATCTAAATAAAAAA         CCCGCCA-GCA ATCA TGCATGGCGGG          TTTTTAACGCGCTAT 100 34
SH07_RS00070 NONE
SH07_RS00075   14249 ..   14259 +    -4  -3.62096   CTTTAAGTTAAGCGG                 GATA CTT TATC                 TTTGGGCTACTCAAA  54 30
SH07_RS00080   14901 ..   14928 +  -7.7   -4.2204   TAAATAATGAGAACA        GGCCGGA-GCGT AATTC ACACATCCGGCC        TTATTTCTTAAGCTT  76 46
SH07_RS00220   46908 ..   46922 +  -4.9  -3.25304   CACACAGACAATAAA               CGGCC CGCGC GGCTG               TTCATCGTAATCTTT  49 519
        trkD   51459 ..   51483 +  -9.3  -5.50723   AAATCTAACGCCAGA          CGCCTCCTT TCTTCAT AAGGGGGCG          TTTTTGTTTTCATGG 100 33
SH07_RS00240   52019 ..   52053 +  -5.6  -3.37612   GAATATCATTCTCTG     TGCTGGCGTGACGTTC TGA GGCCGTCATGGAAGCA     TTACTTCAGCTTAAA  57 7
SH07_RS00245 NONE
        rbsC NONE
SH07_RS00255   55518 ..   55540 + -13.4  -3.22906   AGAAAAGCAGGGCAC           GCGCCACCCT AAC ACGGTGGCGC           ATTTTATGGACATCC 100 108
SH07_RS00260 NONE
SH07_RS00265   57601 ..   57612 +  -2.2  -2.57757   TATAGTGGAATTGTT                CGAC AGTC GTTG                 TGCCTTCCATTCCTT  38 140
SH07_RS00280   61637 ..   61650 +  -2.3  -2.72471   AAGAAGCGTTCTTTG               CAGTG CTCA CACAG                ATTGTCTGATAGGAA  40 34
SH07_RS00285   61813 ..   61848 +    -7  -4.00532   AGTCACCTGCCTTAA    TATCTCAAAACTCATC TTCG GGTGATGTTTGAGATA     TTTGCTCTTTAAAAA  69 61
SH07_RS00290   64950 ..   64963 +  -2.4  -2.78679   AGAACGCAGAAGCGG               TCTG ATGAAA CAGA                ATTTGCCTGGCGGCC  41 89
SH07_RS00295   65103 ..   65118 +  -6.1  -2.82742   AAATTAAGCAGTAAG              CCGGT CATAAA ACCGG               TGGTTGTAAAAGAAT  55 44
SH07_RS00300   65211 ..   65230 +  -2.8  -2.79684   GAGTCCCGTCCGTTC            CGCCACC CTAATTA GG-GGCG            TAGTTCAATTGGTAG  42 21
SH07_RS00305   65307 ..   65326 + -10.8  -6.02914   CCCTGCCAGAAATCA            TCCTTAGC GAAA GCTAAGGA             TTTTTTTTATCTGAA 100 33
SH07_RS00315   66698 ..   66710 +  -6.9  -5.72616   GACGATTAATAAAAA                GGGCG AAA TGCCC                TTTTTTTATGTCAGT 100 32
SH07_RS00325   68712 ..   68735 + -13.8  -5.81032   CTTAACGAACTAAGA          CCCCCGCACC GAAA GGTCCGGGGG           TTTTTTTTGACCTTA 100 50
SH07_RS00330 NONE
        ilvM NONE
SH07_RS00340   71691 ..   71712 + -11.6  -3.53012   AATAAATACAAAAAA           TGGGACGG CACGCA CCGTCCCA            TTTACGAGACAGACA  89 36
SH07_RS00345 NONE
SH07_RS00350   75235 ..   75251 +  -9.4  -4.82901   AGAATGCCTCAATTA              GCGGCT CATGT AGCCGC              TTTTTCTGCGCACAC  95 118
SH07_RS00360   77768 ..   77796 + -16.1  -3.24825   AGAGGGAGAAAACAC        TCAAGGCCTTCTC CTG GAGAAGGCCTTGC        TATTAGTTGCGGTAC 100 81
SH07_RS00375   81029 ..   81055 +  -8.8  -3.73224   AATGCACTTCCAGCG        GCCAGTGGACA TAGCTC TG-CCACTGGC         TTTCCTGAGCAATAA  75 89
        trxA   84334 ..   84362 +  -4.5  -3.93038   GGTCAGTTGAAAGAG        TTCCTCGACGCTA ACC TGGCGTAAGGGAA        TTTCATGTTCGGGTG  61 2
SH07_RS00395 NONE
         rho NONE
SH07_RS00405 NONE
SH07_RS00410 NONE
SH07_RS00415   88355 ..   88380 + -18.3  -3.61517   AATAGCAACACTGCT         GCGGTGAGCGC AAAG GCGCTCGCCGC          TTATTCGAAGAGAAT 100 36
SH07_RS00420 NONE
        wecC NONE
SH07_RS00430   91843 ..   91853 +  -3.2  -3.08032   AGGGCGAGCGTTTAG                 GTCT GAA AGGC                 TAATTTTCAGCGGAG  46 12
SH07_RS00435 NONE
SH07_RS00440 NONE
SH07_RS00445 NONE
SH07_RS00450 NONE
SH07_RS00455 NONE
SH07_RS00460 NONE
SH07_RS00465   98981 ..   99006 + -13.3  -3.18764   TTCCTCTCTTTGTAA         AGCGACGGAGT GGTC ACTCCGTCGCC          TGTCTGCTTTTTTAT 100 43
SH07_RS00470 NONE
SH07_RS00475  100705 ..  100718 +  -2.3  -3.72695   CTCAGGTTCGAATCC               TGTCG GGCG CGCCA                TTTAGTCCCGGCGCT  49 12
SH07_RS00480 NONE
SH07_RS00485 NONE
SH07_RS00490  101087 ..  101102 + -11.8   -5.8901   CCGACCAATTTTGAA              CCCCGC TTCG GCGGGG               TTTTTTGTTTTCTGT 100 34
SH07_RS00495  102635 ..  102680 +  -7.7  -3.74077   TAGTCAGATTTAATC TGCGCGCGTG-GTGGATATTTT TTC AGGATCTCCATATACGCGTGCA TTTCGGTCTGTAGCG  72 200
        cyaA  111968 ..  112003 +  -3.2  -3.01924   AATATTTTTCGTGAT    GAACGTGCCGGA-AAGC GAG GCTTATCCGGCATGCAA    TCTTAGCGGAAACTG  44 27
SH07_RS00535 NONE
        dapF NONE
SH07_RS00545 NONE
        xerC NONE
SH07_RS00555  116194 ..  116227 +  -8.1  -2.93708   TATATATACCCAGCT     TTTTGGCGGAGG-GCG TTG CGCTTCTCCGCCCAAC     CTATTTTTACGCGGC  62 53
        uvrD  118426 ..  118438 +  -9.1   -3.9392   AACGTTGCCGGATGC                GGTGC TGC GCACC                TTATTTGGCCTAAAA  80 39
SH07_RS00570  119535 ..  119572 +  -6.4  -3.29144   GTCATCCAGGATCAA   CTCCTAAGGCTATC CCTTTTTGCT GATAGCCTTAGCGG    TTGTCAGCGACCTCA  59 111
SH07_RS00575  120655 ..  120679 + -15.1  -3.38991   GTAAAAAACGAGAGC          GGTGGCTTAGT CTG GCTAAGCCACC          TGTTATTCAAAGGCT 100 37
SH07_RS00600  124082 ..  124103 + -12.3  -5.27335   TTGCAGTTTCTCGCG           CAGGCGCTG AAAA TAGCGCCTG            TTTTTATTTCAGGCA 100 109
SH07_RS00605 NONE
SH07_RS00610  126665 ..  126701 +  -8.8  -4.58395   GACGCGTCTTCAGAG   TAA-GTCGGATAAGGCG TTTA CGCCGCATCCGACATTA    TTTTTCACGCATGCC 100 46
SH07_RS00620  128441 ..  128454 +  -2.3  -3.94868   CTCACCCAGCGGAAA               CCGCT CTAC AGAGG                TTTAAATTTCTTATG  53 7
SH07_RS00625  129303 ..  129349 +  -2.3  -2.86271   TGTCAACCTGATACT TCGCTACAATGG-ATACCCGTT AATC AAAGAGTTTTCCATTGTGGCGC TACTTATCATCACCA  41 61
SH07_RS00630  130522 ..  130535 +  -6.7  -3.08706   GATAAATTAATAGCG               TCTCG CTGG CGAGA                TCTTCCGGTGTAATT  59 305
SH07_RS00640  133588 ..  133612 + -14.3   -4.5442   CGGGGGTAAAATCCA          AACCGGGTGGT AAT ACCACCCGGTC          TTTTCTCATTACAGC 100 32
SH07_RS00650  135479 ..  135495 +  -9.4  -4.98672   CTTCTCCTGTCTGAA              GGCCGA CGCGT TCGGCC              TTTTGTATTTTTGCG 100 45
SH07_RS00655  137080 ..  137097 +  -2.7  -3.68256   CATCGACGCCCAATC             TGTTACA CTTC TGGAACA              ATTTTTTGATGAGCA  50 78
        ubiE NONE
SH07_RS00665 NONE
        ubiB  140155 ..  140176 +  -2.9  -4.51743   CATCGCTCAAGGCGG           GCCGTGTAA CGTA TAATGCGGC            TTTGTTTAATCATCA  61 47
        tatA NONE
SH07_RS00680 NONE
SH07_RS00685  141783 ..  141804 + -15.9  -2.63596   ACTGAAGAATAAATT           CAACCGCCC GTCA GGGCGGTTG            TCATATGGAGTACAG 100 29
SH07_RS00690  142869 ..  142879 +  -8.2  -3.23692   CGAAGTGGCTGACAC                 CGCG GGT CGCG                 TTGATAGTCGTGGTA  63 291
SH07_RS00700  144740 ..  144754 +  -2.7  -4.67651   TTTAACAACGGTAAA               AGCGC CTGAT GCGCG               TTTGTTTTGCCCTAT  64 17
         fre  145593 ..  145611 +   -11   -3.4252   TGGCAAACCATGCCC             GATGCGAC GCT GTCGCGTC             TTATCGTGCCTACAA  83 123
SH07_RS00720 NONE
SH07_RS00725 NONE
SH07_RS00730 NONE
        hemG  153530 ..  153548 +  -5.8   -3.4072   GAACAACGGCAAACA             CGCCGCCG GGT CAGCGGGG             TTCTCCTGAGAACTC  59 135
SH07_RS00740 NONE
SH07_RS00745  155487 ..  155499 +  -6.3  -3.57309   CTCAGGCCTACCAAA                TTTGC ACG GCAAA                TTTGAAGAGGTTTTA  63 28
SH07_RS00750  155629 ..  155662 +  -6.7  -4.49756   ATTAAATAAAAAATA     CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG      TTTTGCTCTTTAAAA  76 52
SH07_RS00755  158695 ..  158705 +  -4.6  -4.11484   GGCTTAACCTTACAA                 CGCC GAA GGTG                 TTTTGGCGGATTGAG  63 12
SH07_RS00760  158904 ..  158953 + -24.7  -4.09117   GGAACTGCCAGGCAT CAAATAAAACGAAAGGCTCAGTC GGAA GACTGGGCCTTTCGTTTTATCTG TTGTTTGTCGGTGAA 100 28
SH07_RS00775  160655 ..  160665 +    -4  -4.12188   AATGATATCCTTCGT                 CATT CGT AATG                 TTTTCCGGATGATGG  61 75
SH07_RS00780 NONE
SH07_RS00785  162332 ..  162351 + -13.6  -6.01369   TGTAAATTACATAAA            GCCCGTGA ATAT TCACGGGC             TTTTTTTATTATTTA 100 46
SH07_RS00790  163930 ..  163940 +    -4  -3.80174   CTCATTCAGAGGCGA                 GTAA AAC TTAC                 TTATTCTGACGCTGT  57 59
SH07_RS00805  168242 ..  168267 + -19.1   -5.4505   GCTGAATATTTTAGC         CGCCCCAGTCA GTAA TGACTGGGGCG          TTTTTTATTGGGCGA 100 248
SH07_RS00815  170137 ..  170148 +  -3.6  -3.44051   AACGGATTGCCGCCG                TGGG CCTT CCCG                 TTCTGCTGATAACCC  51 39
SH07_RS00820  171810 ..  171865 +   -17  -3.21924   TTGTAGGCCGGATAA GGCGTTTA-CGCCGCATCAGGCATC TGAGCAT GATGCCTGATGCGGCGCTGGTCGCG TCTTATCAGGCCTAC 100 150
SH07_RS00850  178521 ..  178538 + -11.3     -6.13   TTTAGTCATAAAAAA             CCTGCCA GCGA TGGCAGG              TTTTTTTTTGCCTGT 100 49
SH07_RS00855 NONE
SH07_RS00860 NONE
SH07_RS00865  181830 ..  181861 +   -10  -2.75844   ACCGTATCAACCGTA      GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA       GTTTCACATCAGAAG  72 76
SH07_RS00910 NONE
SH07_RS00915 NONE
SH07_RS00920 NONE
SH07_RS00925 NONE
SH07_RS00930 NONE
SH07_RS00935  196714 ..  196733 +  -7.8  -2.74756   AGAGTAGCTGATGGA            GAGGGGCG GTGC TGCCTCTC             TCATTCAGGTCATTT  61 34
SH07_RS00940  197771 ..  197792 +  -4.5  -3.12351   TGTAAGGAGCATAAG           GAATGACAA AAAT TTTTCATTC            TTGAATATAAAAAAC  51 20
SH07_RS00945  198278 ..  198307 + -10.7  -3.30124   GCTGACAACGTGCGC       GTTGTTCATGCCG GATG CGGCGTGAACGCC        TTATCCGGCCTACAA  76 67
SH07_RS00980  205123 ..  205157 +  -9.4   -3.5782   AGCAATTAATTAAAA     TAAGTCCTGCGAAATA TAT TAAATTGCAGGACTTA     TTCATTTCGTGAATT  78 32
SH07_RS00985  206657 ..  206687 +    -6  -2.70946   TCACCTTCGCCTTCG       CGGGCGATGATGCG TTG TGCTTCATCGGCGG       TAATATGGTGTTGTG  51 358
SH07_RS01030  215925 ..  215938 +  -3.9  -3.59979   ACGTTTTTTACGTGG               TTTTC CGTC GAAAA                TTTAAGGTAAGAACC  53 7
SH07_RS01035 NONE
SH07_RS01040  217834 ..  217844 +  -6.8  -2.66106   CTCAACACCGTTACC                 GGAC GGC GTCC                 TGCATTGTTCCACTC  52 98
SH07_RS01050  219755 ..  219773 + -12.4  -5.67063   AGCTTAAAAAATGAA             CCATCGCC AAC GGCGGTGG             TTTTTTTGTGATCAA 100 83
SH07_RS01060  220964 ..  220987 + -13.2  -3.94853   CCTTAATCCCCACAG          CCGGATGAAC TAAC GTTCGTCCGG           TTTGCTATTGAGTTC 100 49
SH07_RS01065  221833 ..  221844 +  -7.2   -3.4252   TCAAATGCCGGATGC                GGCG TAAA CGCC                 TTATCCTGCCTGCAA  66 95
        cpxP  224628 ..  224646 + -14.6   -5.9873   CACCATCCCTGTCTT             CCCCCACA TGC TGTGGGGG             TTTTTTTTATCCTCA 100 66
        fieF NONE
SH07_RS01090  226967 ..  226983 +  -9.4   -4.7497   TTGTCAGCAATATGA              GGCGGA TTTCT TCCGCC              TTTTTAATCCCTCAA 100 211
SH07_RS01095  228113 ..  228135 +  -6.9  -5.72622   AGGATAATTATCAAA           CCCGGTGGT TTCTC GCGACCGGG           TTTTTTATTTGTCAC 100 48
SH07_RS01100  229304 ..  229317 +  -2.3  -4.18197   CGCACCTTCGAATGC               CGCAG CACC CTGAG                TTTTCAGTACCGCGT  58 377
SH07_RS01115  231050 ..  231097 +   -16  -2.84566   CTCTTACTGCTATTT TTTTCCGGG-ATTGTTATTTCCA CGA TGCAAATGACAATACCCGGAAAA TCCTTCTGAACTCTT 100 53
SH07_RS01120 NONE
SH07_RS01125  232019 ..  232059 + -10.3  -3.35224   GCTCCGCTGTCATAT  GGCCCGGTCGGCGACGTAA ATG TTTCGTCATCTGCCGGGTC  TCTTTCAGCAACTGT  72 56
SH07_RS01150  237089 ..  237104 + -10.4   -4.3953   GTAACGCAGAAAAAA              GGCACC TTGC GGTGCC               TTTCTTATCATTCAA 100 87
        rpmE  245512 ..  245525 +  -9.5  -5.64274   GGATTTCCGAAAAAA               GCGCC GCAC GGCGC                TTTTTTTGTGCCTGA 100 45
SH07_RS01205 NONE
        metL  250683 ..  250705 +   -12  -5.42605   AGTTTATATTTGCAG           TCCGGTTTGC TTT GCATACCGGA           TTTTCTTTTTCTTAC 100 176
        metF  251846 ..  251884 + -10.4  -2.60392   GCTGCCTCGAAATGA   GGGCGGGAAAATAAGGTT ATC AGCCTTGTTTTCTCCCTC   ATTACTTGAAGGATA  74 100
SH07_RS01225  254289 ..  254322 + -19.7   -3.9122   GCTGTAATCTGACCC     CGTTCAGCGGCTGCT TGCT GGCAGTCGCTGAACG      TTCTTTACCAGCGTA 100 34
SH07_RS01230  255556 ..  255590 +  -3.5  -3.80083   AGGTTTCCAGATTAG    GCACCC-GACGGTGAT CGAT GTTGCTGTCCGGGCGC     TTTAACTTCCATTTT  56 303
SH07_RS01260 NONE
SH07_RS01265  262218 ..  262235 + -10.5  -3.27525   CGCTTAAGTTCTTCT             CCCGCTC GCAA GGGCGGG              TTCGCTTTCCCACAG  78 34
        pflD NONE
SH07_RS01275 NONE
SH07_RS01280  266235 ..  266259 +  -6.3  -4.52347   TATGCGTGGGCCGCG          TCGGGCGACGT GTT GCTTCGCCAGA          TTTTGATATTGTTTG  74 516
SH07_RS01310 NONE
SH07_RS01315  275063 ..  275086 +  -5.2  -3.28001   AGCTTAAGTTTTGTT          GGCCGG-AGGC GCA GCTTTCCGGCA          TTGAATTTCAAAATA  55 34
SH07_RS01320  276513 ..  276531 +  -9.5  -5.24129   TATGTATAAATTTGA             GCCTGGC TTATC GCCGGGC             TTTTTTATGGCAAAA 100 50
SH07_RS01325  277841 ..  277863 +  -5.7  -4.11216   AATACCCAGAATCTC           TTTTGTTTC CCGAT GGAACAAAA           TTTTCAGCGTGCCCA  65 194
SH07_RS01335 NONE
SH07_RS01340  280401 ..  280432 + -11.6  -4.41494   TGCTGAGTAATCGGT      ATTATGCCGGATGC TGGC GCATCCGGCATGGG       TTTTACTTCGCGGTC 100 31
        btuB  283756 ..  283791 +   -14  -3.41125   CCTTCTGAACCACGT    CCCACCG-TGCTGGTGT TTG ACTCCGGCGTCGGTGGG    TTGTCGGTCTATGAC 100 33
SH07_RS01355  284656 ..  284674 +  -5.8   -3.4072   GAACAACGGCAAACA             CGCCGCCG GGT CAGCGGGG             TTCTCCTGAGAACTC  59 131
SH07_RS01360  286486 ..  286499 +  -2.3  -2.72471   AAGAAGCGTTCTTTG               CAGTG CTCA CACAG                ATTGTCTGATAGAAA  40 34
SH07_RS01365  286662 ..  286697 +    -7  -4.00532   AGTCACCTGCCTTAA    TATCTCAAAACTCATC TTCG GGTGATGTTTGAGATA     TTTGCTCTTTAAAAA  69 61
SH07_RS01370  289797 ..  289810 +  -2.4  -2.78679   AGAACGCAGAAGCGG               TCTG ATAAAA CAGA                ATTTGCCTGGCGGCA  41 84
SH07_RS01375  289934 ..  289983 + -24.7  -4.09117   GGAACTGCCAGGCAT CAAATAAAACGAAAGGCTCAGTC GAAA GACTGGGCCTTTCGTTTTATCTG TTGTTTGTCGGTGAA 100 28
        murB NONE
SH07_RS01385  292247 ..  292261 +    -5   -2.6472   GAGTATTCGCTCCCC               TGCAAA TTA TTTGCG               TAGTCTGACCTCTTC  48 48
SH07_RS01400 NONE
SH07_RS01405  293789 ..  293809 +  -2.5  -3.05816   GCTTACCGGCTCGAA            TAAAGAGAG CTT CTCTCGATA            TTCAGTGCAGAATGA  43 81
SH07_RS01410 NONE
SH07_RS01415  294057 ..  294071 +  -7.8  -2.57944   TTGCATTCAACAAGT               CGGGCA TGT TGCCTG               GTTGATGTGGTGATA  60 76
         tuf  295329 ..  295368 + -13.6  -3.72576   AACATTTGACGCAAT  GCGCACTAAAAGGGCATC ATTT GATGCCCTTTTTGCACGC   TTTCGTACCAGAACC 100 49
        secE NONE
        nusG  296500 ..  296538 + -13.3   -4.8543   GCGATTTAATCGTTG   CACAAGGCGTGAGATTG GAATA CAATTTCGCGCCTTTTG   TTTTTATGGGCCTTG 100 60
SH07_RS01435 NONE
SH07_RS01440  297769 ..  297805 +  -6.6  -2.87136   AAACTAATGCCTTTA   CGTGGGCGGTGATTTTG TCTA CAATCTTACC-CCCACG    TATAATGCTTAATGC  57 34
        rplJ  298663 ..  298676 +  -3.8  -4.07746   GCGATGCGAAAGAAG               CTGC TTAATC GCAG                TTATCTTTTTAACGC  60 18
        rplL  299142 ..  299167 + -17.7  -4.64766   AGAAATCAGGCTGAT         GGCTGGTGACT TTTT AGTCACCAGCC          TTTTTGCGCTGTAAG 100 65
        rpoB  303470 ..  303497 + -15.6  -2.65298   CGCTCAAACAGGTCA        CTGCTGTCGGGT TAAA ACCCGGCAGCGG         ATTGTGCTAACTCCG 100 45
SH07_RS01460  307777 ..  307790 +  -9.5  -5.60993   CAAATAACGTAAAAA               CCCGC TTCG GCGGG                TTTTTTTATGGGGGG 100 52
SH07_RS01465  308508 ..  308523 + -10.4  -3.53343   CTCAAAATAACAAAA              CCCACC TTAA GGTGGG               TTTCGCCAGAGAATT  80 31
        nudC NONE
        hemE  316952 ..  316963 +  -2.2  -2.63382   TCTGAACAGTATCAC                CGCT AAGG AGTG                 ATTATGGATCTCGCG  40 20
SH07_RS01515  317652 ..  317664 +  -4.8  -3.35597   AATTCAGGTAAACTG                CGGA TAATT TCCG                TATTTGAGAACTCAA  53 39
SH07_RS01520  318392 ..  318404 +  -4.1  -3.65351   GTGTATGCAGGAGAG                TGCTA TTC TGGCA                TTTCCGTCGCACTCG  54 146
SH07_RS01525 NONE
SH07_RS01530  319679 ..  319690 +  -5.8  -3.57263   TCACCAGTTGCTGTT                GCAG TGCG CTGC                 TTTGAGCGTAAAAGT  60 266
SH07_RS01540 NONE
SH07_RS01545  323134 ..  323154 +  -3.3  -4.05788   AGCGCGTTCATCCCA           CTCGGACG TTTTCT CGTCC-AG            TTTGCTTTCACAGGC  58 337
SH07_RS01570  327886 ..  327899 +  -2.3  -2.72471   AAGAAGCGTTCTTTG               CAGTG CTCA CACAG                ATTGTCTGATAGAAA  40 34
SH07_RS01575  328062 ..  328097 +    -7  -4.00532   AGTCACCTGCCTTAA    TATCTCAAAACTCATC TTCG GGTGATGTTTGAGATA     TTTGCTCTTTAAAAA  69 61
SH07_RS01580  331128 ..  331138 +  -4.6  -4.11484   GGCTTAACCTTACAA                 CGCC GAA GGTG                 TTTTGGCGGATTGAG  63 12
SH07_RS01585  331350 ..  331370 + -11.8   -5.1287   ATCAAATTAGAAAAA            CCCCGGTC CATAA GGCCGGGG            TTTTTTGCATATCAA 100 41
SH07_RS01590  332117 ..  332127 +  -2.4  -2.70932   ACATAAATCCAACCG                 GCTG ATC CCGC                 TCATTAACCGCGACC  39 348
SH07_RS01600  333432 ..  333447 + -10.4  -5.63517   CAGCACCTTACCTCA              GGCACC TTCG GGTGCC               TTTTTTATTTCCGAA 100 71
SH07_RS01605 NONE
SH07_RS01610  336670 ..  336683 +  -8.1   -3.4252   CACGATGCCTGATGC               GACGC TTGC GCGTC                TTATCATGCCTACAG  68 105
        aceK  338753 ..  338765 +  -6.3  -4.04318   GATAAACCGTCTCTA                CAACA TTT TGTTG                TTTATGCTGTATCGC  68 269
        metH  345717 ..  345747 + -10.4  -4.29106   CACTTTTCCTTACAA       CAAACAGGGCGCTC AAT GAGTGCCCTGTCTC       TTTATTAATATGAAA 100 54
SH07_RS01635  347602 ..  347624 +  -7.7  -3.17075   GGCACTATGAACAAG           ATGCCGGAT CATGC ATCCGGCAA           TTCACTTAAAAACGG  63 88
SH07_RS01645  349547 ..  349558 +  -2.2  -3.44848   TGGATTAGCGCCTGC                CG-CG CGT CGACG                TATTTGCTGACCAGC  47 169
         pgi  353612 ..  353658 + -14.3   -2.5294   TGTAGGCCGGATAAG GCGTTCACGCCGCATCCGGCA ACCGA TGCCTGATGCGACGCGGTCGC GTCTTATCAGGCCTA  93 53
SH07_RS01675  355171 ..  355192 + -11.7  -3.32343   TGAAGGGATTAACCA           TAACCACAC TCCG GTGTGGTTA            TTCTGCCCCTCTGGA  86 94
SH07_RS01680 NONE
SH07_RS01685 NONE
SH07_RS01690  358696 ..  358723 +  -8.5  -3.56142   CTAAGTCATGGGAAA        GGTGCCAGT TTTCGCACTC ACTGGCACC         TTCATTCTTAATGGC  71 37
SH07_RS01700  359134 ..  359154 +  -5.4  -2.90714   CGCCGCCAGGCGCGG            CTTATCCG GCCTA CGGGTAGG            TATATCCGGCTTTGG  52 6
SH07_RS01705  359736 ..  359746 +  -2.4  -4.58419   TGGACAGGAAGATTA                 CAGC GTA GCAG                 TTTGTTGTGTTTTCT  63 72
SH07_RS01735  366876 ..  366886 +  -6.8  -2.62184   ACAAAACACACAAAG                 CCTG TCA CAGG                 TGATGTGAAAAAAGA  56 48
        lamB  368335 ..  368382 + -12.2  -3.53811   GATGCGACGCTTGCG CGTCTTATCAGGCCTACA ACGGCTGTCAAA TGTAGGCCGGATAAGGCG TTTACGCCGCATCCG  91 95
SH07_RS01745  369461 ..  369480 + -11.4  -5.71983   GATTTTGCAACAACT            GGTGCGTC TCCT GGCGCACC             TTTTTTTATGCTTCC 100 58
SH07_RS01750 NONE
SH07_RS01755  371351 ..  371361 +  -3.2  -3.66156   GTTTTACCACTTCAT                 GCGA TTG TTGC                 GTTTTTGTTGCGTAT  51 139
        ubiC NONE
        ubiA  372855 ..  372872 + -11.3  -4.35604   TGATGATGTAAAAAA             GCCGGAT GATC ATCCGGC              TTTCTTCTGGGTTGC 100 38
SH07_RS01775  375965 ..  375986 +  -2.4  -4.33851   TTTTGGATAACCCTT           CCAGA-ATT CGATA AATCTCTGG           TTTATTGTGCAGTTT  58 31
SH07_RS01780  376691 ..  376714 +   -16  -4.94262   AACATATCTCTGAGA          CCGCGATGCC GCCT GGCGTCGCGG           TTTGTTTTTCATCTC 100 39
SH07_RS01785  378134 ..  378154 +  -2.6  -2.69964   CTACACTTAATCTCA            CGTTCA GAAGAAAAG TGAACG            TACTCTCATTCACAA  41 84
SH07_RS01790  378712 ..  378724 +  -9.1  -3.28791   GAGCACATAACTGTT                GGTGG ATT CCACC                TTATGCACAAAACCT  69 337
SH07_RS01800 NONE
SH07_RS01805  380302 ..  380323 +  -9.5   -5.4251   AGGCATTATATAAAA           GGACCCAAT ATTT ATTGGGTTC            TTTTTTCTCTATCAA 100 67
SH07_RS01810  381691 ..  381714 + -13.1  -4.43681   TAGTCAAATTCACCA          CGCCCTGCG CACCGT CGCGGGGCG           TTTTGCTGTTAAATC 100 56
        pspG  382171 ..  382195 +   -10  -4.77775   CGAACTATAAAAAGA          AAGGGCTTCC CAGGT GGAAGCCCTA          TTTCTTTTATGGAAT 100 160
SH07_RS01825 NONE
         alr  385927 ..  385947 +  -3.9  -3.98661   TGCTCTTATAAAGGT            CGTGCCTCT GGC GGATGTACG            TTTGTCATGAGTCTC  58 137
SH07_RS01835  387511 ..  387523 +  -4.9  -2.78935   TCGGGTTTGTTACGA                TAGAA TAT TTCTA                TATCCTCAAGAATAT  46 275
        aphA  389082 ..  389116 +  -6.5  -5.52384   AATTCAGAATACTGA    CAG-A-GCGGGAGAGCG TGA TGCTCTCCCGAATGCTG    TTTTTTTAATCACAC  91 26
SH07_RS01850 NONE
SH07_RS01855  390025 ..  390057 +  -4.8  -2.93393   ATCGGCTTAAGGAAG     CGT-GCCGTGTGTGA TGCT TCGCACTCCGCGACG      GTTTCTGGCGTACCG  50 82
SH07_RS01865  393688 ..  393704 + -10.1  -3.39505   AGCCATAAAAAAGAA              GCCTCCG TTA TGGAGGC              TTCTACGTATCAGGT  76 98
SH07_RS01875  396168 ..  396192 +  -6.5  -2.80816   GCCAGTAACAGGCGG         CG-TTGGCGA ATGTAA TCGCCAAGCG          TCTGATGCGTCACCG  51 182
SH07_RS01885  396884 ..  396908 + -14.4  -4.67651   GGAAGATGAACAAAA          CTAAAGCGCC ACAAG GGCGCTTTAG          TTTGTTTTCCGGTCT 100 22
SH07_RS01890  398798 ..  398829 + -12.4  -4.37658   TCTTTCATCGGATTC      TGAAAACGGGTGGC AATG GCTGCCCGTTTTTA       TTTTCTCCGCACATT 100 41
SH07_RS01895  400624 ..  400641 +  -9.9   -3.5774   AGGTAATCTGAAAAA             GGTGCAA TCTT TTGCACC              TTTAACAGGTTAGCT  80 66
        nrfA NONE
SH07_RS01925 NONE
SH07_RS01930 NONE
SH07_RS01935  410427 ..  410440 +  -2.3  -2.98304   GTATTCCTTCCTGAA               GTCGG TTTT CTGGC                GTTGTTGTTAAGTCT  42 66
SH07_RS01940 NONE
SH07_RS01945 NONE
SH07_RS01950  413207 ..  413219 +  -3.4  -3.84246   CAAATAAAAATCTTT                CCAT AACAA ATGG                TTATTCATTAATCCT  53 139
SH07_RS01955  415240 ..  415274 + -10.7  -3.08867   CGCATCCGACATCAA     TGCCTGATGCGACGC TTGCC GCGTCTTATCAGGCC     TATCTTAACCGTTGG  79 517
SH07_RS02030 NONE
SH07_RS02035  433473 ..  433485 +  -6.2  -3.53811   GACAGCCACGCCACC                CGGC TGTGT GCCG                TTTCCAGCAGATAAC  58 458
SH07_RS02120 NONE
SH07_RS02125  449184 ..  449242 +  -3.2  -3.62522   AACTGCCCAATTCAG GCGTCAACTGGTTTGATTGTACATTCC TTAACC GGAGGGTGTAAGCAAACCCGCT-ACGC TTGTTACAGAGATTG  51 128
SH07_RS02130  450892 ..  450908 +    -3  -2.58999   TCTTATCAGGCCAAT              TGAACT CTTAA GGTTCA              CTTAATCTCTGACGC  42 70
SH07_RS02135  451079 ..  451096 +  -6.3  -4.07568   ACCCAGGCCCGCGTG             CCGG-AAG TCT CTTGCCGG             TTTTGCAGGAAAAAC  68 56
SH07_RS02175  460653 ..  460665 +  -3.3  -3.88291   TTTACTGCTGCTTCA                CGCAG GAT CTGAG                TTTATGGGAATGCTC  53 14
SH07_RS02180 NONE
SH07_RS02185  463655 ..  463685 +  -3.3  -2.52519   CAATAGCTAACGAAA       ATGGCCTGATG CGATATGTT TATCAGGCCAC       GTCTTAATGTAATGC  42 47
SH07_RS02205  468382 ..  468406 +  -4.9  -4.07568   TCCACTGGCACAGTG          TGCGTAACGTC TGC GGCGTTAAGCC          TTTTGGCAAGCGACG  62 226
SH07_RS02220 NONE
SH07_RS02225  471490 ..  471517 +  -6.4  -2.98491   CCATCATCTTATTCC        TCAGTGTTCTTA AGAT TAAGATCATTGA         TGTATGATATGAATT  56 315
SH07_RS02230 NONE
SH07_RS02235  472003 ..  472026 + -15.4  -3.35813   TTGCGGAACGATGAA          CGAAGCAGTC GCCT GACTGCTTCG           TTCATTAAAGTGAAA 100 104
        fxsA  487992 ..  488024 +  -4.8   -5.0925   GGATTAATGTCGAAA      CGCCGGATTATG TGGTTATGC CATTTTCCGGCG      TTTTTCGTTTTGGCA  80 34
       groES NONE
       groEL  491544 ..  491567 + -12.4  -5.50723   GCAGAAATAAACAAA          CCCCCGGGCA GAAA TGTCTGGGGG           TTTTTCTTTTGGTCA 100 55
SH07_RS02315  492382 ..  492393 +  -5.8  -4.02911   GAAATCAAGCATTCG                GCGA GTGA TCGC                 TTCTATTTCTTTACC  68 402
SH07_RS02330  495113 ..  495144 +   -13  -3.65046   GCGTGAAGTAATGCG      GTTGTGGTGCGGCC TGCA GGCTGCACCATCAC       TTATTCAGGTCAGAG 100 30
SH07_RS02335  495269 ..  495281 +  -3.3   -2.6432   TCGGCAACTCCATCT                CTCGC GCT GCCAG                CTAATTTTTCTTCTC  42 9
SH07_RS02340  495546 ..  495577 +    -8  -5.26316   GCGCAGCAATAAGCA      ATAACGGTACGACA GCTG TGTCGTGCCGTTTG       TTTTTTCTGCGATAG 100 29
SH07_RS02345  496316 ..  496326 +  -3.2  -3.42197   TCTGCTGCCACATTC                 CTCT GTC AGGG                 TTATAGCCTTTATTA  49 306
SH07_RS02380  502609 ..  502635 +  -7.3  -3.05596   GTATTGGTTTTTACG        CTGC-CTGCTCA ATGT TGCGCAGTGCAG         TTCAGTGGGCACGTG  61 171
SH07_RS02385  504171 ..  504194 +  -3.7   -2.8655   CAAAAAATCCGCAGT          GGGCGGTGG AATAAC CCGATGCCC           TATCGTCTACCTGAC  45 12
SH07_RS02390 NONE
SH07_RS02395  505215 ..  505228 +  -5.9  -2.78384   TCTTCGCTATTGGCA               TCGGC AGGG GCCGG                TATCGTCAACACCAC  51 379
SH07_RS02415  511035 ..  511049 +  -4.2  -2.53759   AATCCACTTGCGGCG               GCGTGA TTT TGACGC               TAAATTGAACGTCTT  45 68
SH07_RS02420 NONE
SH07_RS02425 NONE
SH07_RS02430  511524 ..  511551 +  -3.4  -5.27206   CTCTCAATAAAATAT        CCA-CAGCGACGC GAT GCGTTATTGCTGG        TTTTTGTTGTCTCTG  79 48
SH07_RS02440 NONE
SH07_RS02445 NONE
SH07_RS02450 NONE
SH07_RS02455 NONE
        miaA NONE
         hfq  519460 ..  519492 +  -7.1  -2.54504   CGGGCTGTTTTTTTA     CA-CGGGGAGC-CAG CGATC CTGCGTTCCCCGCTG     ATCTATTTAGAGGGT  58 46
SH07_RS02470 NONE
SH07_RS02475 NONE
SH07_RS02480  523177 ..  523203 + -13.1  -5.38839   TACAGGTCAATAAAG        CCACCG-CATCC TCAG GGATGTCGGTGG         TTTTCTTTTTCTATA 100 55
SH07_RS02485 NONE
SH07_RS02490  524883 ..  524917 + -11.6  -3.10975   CAGTGTGATACATTG    CTGTGTCGGGTAAGC CATTAC GCT-ATCCGACACAG     TGTTAAATCCTCGCT  84 80
SH07_RS02495 NONE
SH07_RS02500  527945 ..  527964 +  -8.6  -3.20723   GCAGAGTGATCAATA            CCCTCTTT AAAA GAAGAGGG             TTAGATTGCTGACAA  67 32
SH07_RS02505  528870 ..  528887 +  -9.9  -6.32216   CAGAATTATGAAAAG             CCATCCA GATT TGGATGG              TTTTTTTTTGTCTAT 100 46
SH07_RS02510 NONE
SH07_RS02515  530100 ..  530126 + -12.4  -2.79004   GGGCGAGTAATTTTT         TTGCCAGCCT CGCTAAA AGGCTGGCAA         CTATTTTAAGGATAA  89 31
SH07_RS02520 NONE
SH07_RS02525 NONE
SH07_RS02530 NONE
SH07_RS02535  533070 ..  533099 + -13.7  -3.14132   TCTGTCATGAATCCA       TGGCAGTGACCAT ACTA ATGGTGACTGCCA        TTGATGGAGGGAGAC 100 61
SH07_RS02540  535104 ..  535146 +  -3.5  -4.98531   GGATAAGTCACTAAT TGCAGC-GAGGGTGAGGCAA GTAA TTGTTTCATCGTCAGCTCCA TTTTTCGTTTCCCCA  76 386
SH07_RS02555  537029 ..  537041 +  -4.7  -3.57792   CGCCCGGATTAACCA                GCTGC GAG GCCGC                TTTAGCGATACGTAC  55 510
SH07_RS02570  540213 ..  540227 +  -2.8  -4.48987   AACTGGCAGAACAGT               CTGCTT AAT AAGGAG               TTTTGATTATGACCG  61 18
SH07_RS02575 NONE
SH07_RS02580 NONE
        ulaD NONE
SH07_RS02590 NONE
        araD  543437 ..  543449 +  -9.1  -3.46435   TACGTGGTAGTACGT                TGCGC CTT GCGCA                TCTGTTTCTTCATTT  71 233
SH07_RS02605  543823 ..  543833 +  -2.4  -3.27525   AGGGGAGATTTATTT                 CGGC TCT GCCC                 TTGAGTTTAGCGAGG  45 11
        rpsF NONE
SH07_RS02615 NONE
        rpsR  544912 ..  544922 +  -2.4  -2.50307   TCGCCATCAGTAATC                 GGTC ACG GTCC                 ATTAATACGACTTTG  39 28
        rplI  545421 ..  545449 + -16.1  -3.33352   TATTCAACGAGACGT        AAAAACGCCGACC ATT GGTCGGCGTTTTG        CTTTCTATTTTTCGT 100 46
SH07_RS02635  547001 ..  547031 +  -7.4  -4.13014   GTATCAATGGTTAAG       CCCGTCACCACGCC GCT GGCGTTCTGGCGGA       TTTTCACCATCTGCC  74 88
SH07_RS02645  548577 ..  548587 +    -4   -3.1372   AAATTAACATTAGAT                 CTAA ATC TTAG                 TATTCATCCCGCGTA  49 204
SH07_RS02650  550132 ..  550156 + -16.5  -4.19817   TAACCGCATTATCAT          GCTGGATGGCG CAA TGCCATCCAGC          TTTTAGATCACTCAC 100 38
SH07_RS02670  553406 ..  553432 + -12.3  -2.60798   AAGATGCGCCAGCAT         CGCATCCGCCA ATAAA TGCCGGATGCG         GTTGATGATTTATAG  88 95
SH07_RS02680  556341 ..  556383 + -10.1  -3.86346   GTCTATTTACTAAAT TCA-GATGGCAGAAACAG TGTATTTC CTGATTCTGCCATCCTGA TTTCTCCCAACCTAA  84 28
SH07_RS02685  557489 ..  557519 +    -7  -2.53831   AACTCAGAGACTTAA       TTCCCCTATC CCATAGATAAC GATAGGGGAA       AATTATTTTTGCAGA  55 26
SH07_RS02695  558678 ..  558698 + -16.9  -3.50335   TATGCAGTAATAAGA            CGGCTCCTG ATT CAGGAGCCG            TTGATGTTTCTGGGG 100 67
SH07_RS02710 NONE
SH07_RS02715  562940 ..  562951 +  -4.4  -2.69546   ACAGTTTTACATCGG                TCTG GGGC CAGA                 ATTATGAGTTTATGG  45 7
SH07_RS02720 NONE
SH07_RS02725  567086 ..  567110 + -10.8  -5.00616   ATAAGTAACCATATG         CATACGCCACC TTCG GGTGGCGT-TG          TTTTTTGCGAGACGA 100 33
SH07_RS02730 NONE
SH07_RS02735  568191 ..  568209 +  -5.2  -4.07568   ACCAGTTTCGCATCT             TCACCGGC TTC GTCGGTCA             TTTTCAGAACGCCAA  65 331
SH07_RS02745  569844 ..  569858 +  -7.1  -3.42996   ACTGAAGCCTGATGC               GACGC TTACC GCGTC               TTATCATGCCTACTG  66 108
SH07_RS02750 NONE
SH07_RS02755 NONE
SH07_RS02760  573812 ..  573831 +  -6.5  -3.40371   TTCTTCACCCCGTTC            GGAAACT TAATGT AGTTTCC             TTCGTTGATGGAGTA  56 416
SH07_RS02770  576032 ..  576061 + -13.5  -2.74792   ATATAGTATGCGTAG       GCCGGATAAGGCG TTCA CGCCGCATCCGGC        ATTTGAGCATAGTGC  93 56
        pmbA NONE
SH07_RS02785  578706 ..  578739 + -14.7   -3.4072   ATCGTTAATTCCTCA     TTTCCCTGTTGCCTG CACT CAGGTAACAGGGAAC      TTATCATCGCAAATG 100 33
SH07_RS02815  589338 ..  589357 + -10.7  -3.65827   TGTCATCAGACTTAA            TCCGGGC ATGATA GCCCGGA             TTTCCATCAAGATTA  84 199
SH07_RS02840  592138 ..  592163 +  -6.1  -2.60723   CGTGAGTAAACAAAA         CCCAGACATCA TGGA TAATGGCTGGG          CTTAATTGAGCGTAG  54 475
SH07_RS02855 NONE
SH07_RS02860  594164 ..  594195 +  -7.4  -3.85698   ATGGCGTGATGACTT      TTCGCCGTAAAT AACTCAAG GTTTACGGCGAG       TTTGTGAAAAGAGCG  70 32
SH07_RS02865  596103 ..  596133 +  -9.8  -3.87815   TGCATAAAATAATGT       GATGCCGGGA TGGTTTGTATT TCCCGGCATC       TTTATAGCGATAGCA  84 34
SH07_RS02875  597847 ..  597871 + -15.7  -5.47399   TTGTTAATGTTCGAA          TGCCCGCGAGT TGA ACACGCGGGCA          TTTTTTTAGAGTTCG 100 140
SH07_RS02885  599781 ..  599800 +   -15  -3.72073   GTAAGAGATAAAAAA            GGCCGGAG CATG CTCCGGCC             TTCGTTTTCATCACT 100 37
SH07_RS02905 NONE
SH07_RS02910  607257 ..  607280 +   -14   -3.9461   AACCGAATGAACGAA          TAAAGGGAGC GAAA GCTCCCTTTA           TTATTGTTAGCAAAG 100 39
        idnK  614382 ..  614397 +  -6.8  -3.05562   GCCAGTGCTTTCAGT              GCCTGCG GAT CGC-GGC              TATTCACCACTTTAT  56 378
SH07_RS02950  615347 ..  615362 +    -9  -5.64274   AAAAGTATGTAAATA              GACCTC AACT GAGGTC               TTTTTTTATGCCTGA 100 40
SH07_RS02955  616787 ..  616806 +   -15  -2.88832   TTAAAACAGTAATCA            TCCCGGGC AAAT GCCCGGGA             ATTATTCTAGGATTA 100 29
SH07_RS02965 NONE
SH07_RS02970  618533 ..  618544 +  -2.2  -3.06501   GGTTAGTTATCTTCG                TCTG TCAG CGGA                 TTGAATGGCGGTATA  42 215
SH07_RS02985  620061 ..  620079 +  -5.3  -3.53343   GCCCGCATAACCCGT             TGACTTC CTGAA GAAGTCG             TTTCAGGGAGAGATT  57 15
SH07_RS02990  620437 ..  620452 +  -5.4  -3.85698   TCTTCGGGTAAGTGA              TACCTG CCGT CAGGTG               TTTGTGCACCGGGCC  61 116
SH07_RS02995  620935 ..  620964 +  -9.3  -4.59109   CATCTTGGTTCTGTA       ATGCCAGTCAGTT AAGC AACTGACTGGCTC        TTTTTCGGGGCTGTG 100 42
SH07_RS03005 NONE
SH07_RS03010  625257 ..  625282 +  -5.4  -4.62984   AATGTAAAAACTATA         CGCCTCTTGA TTTAAT TCAGGAGGCC          TTTTATGTATGATCA  73 34
SH07_RS03020 NONE
SH07_RS03025  626598 ..  626626 +    -4  -3.91897   TCCCATGTCAGTGAT        TTTCTGAGTT CTGACGGTA AACTCAGGAA        TTTGTCGGTAAGAGC  59 317
SH07_RS03040  628713 ..  628723 +  -5.4  -2.94695   CCAGCCGCAGTACAG                 GTCA CGA TGAC                 TCTGGTTAATGATAC  52 102
SH07_RS03045  629167 ..  629189 +  -6.2  -5.21709   ACCAGCTCCGTGAAT           GTCCGCTCTG GCA CAGAGCGAAA           TTTTTTGATCTCCCC  87 216
SH07_RS22860  637835 ..  637849 +  -7.8  -2.64616   TTCTGAGCCTGCTGT               CGGCCT TTG AGGTCG               TGGTATAGATGACGG  60 3
SH07_RS03095  638145 ..  638168 + -12.5  -3.95647   CTAATCAATAAAATC          CTGCCCCAT ATCTAC ATGGGGCAG           TTGTTCATTCTTTTA 100 103
SH07_RS03185 NONE
SH07_RS03190  655301 ..  655311 +  -4.6  -4.63542   AATAACAACGGTTTA                 TGCG GTG CGCG                 TTTTTCACCCTTGTG  71 452
SH07_RS03210  658924 ..  658934 +    -4   -4.7878   AAAAACTAAAGATCT                 TAGT TTA ACTA                 TTTGTTTTATAAATA  71 87
SH07_RS03220  660765 ..  660794 + -10.9  -5.10064   TTAATGTAATTGACT       GATAGCCACATCAC TCC GTG-TGTGGTTATC       TTTTTATCTATTGGG 100 388
SH07_RS03225 NONE
SH07_RS03230 NONE
SH07_RS03235  662604 ..  662615 +    -3  -3.62411   TTATGATATGGACAG                TTTG GCCC CAAA                 TGTTTCATCTTTTGG  51 46
        fimA  663378 ..  663391 +  -3.1  -3.83026   TATTTCTATTAGCGT               CGTTG CTGC CAATG                TTTGCTCTGGCCGGA  53 121
SH07_RS03245 NONE
SH07_RS03250 NONE
SH07_RS03255 NONE
SH07_RS03260 NONE
SH07_RS03265 NONE
SH07_RS03270  669538 ..  669564 + -14.4  -3.10537   AGACTTTGTCATCAG         TCTGAGCCTGCC ATT GGCAGGCTCTGG         TGTCCTTTTACGCTA 100 234
SH07_RS03280 NONE
SH07_RS03285  672446 ..  672470 +   -15  -3.58329   AGCCGTTAATATCCA          CCGGCATGGC TGCGC GCCGTGCCGG          TTCCTTCTTCCTTGC 100 32
SH07_RS03290  674005 ..  674036 + -12.5  -4.94243   TACCCTACAGACTTA      CTGGTCAATCAAA CTGATA TTTGGTTGACCAG       TTTTCGTTTTTTTGC 100 50
SH07_RS03300  674982 ..  675006 +  -9.3   -4.2528   GACTTATTATAATAA          GCGCAAGGG TAAACGT TCCTTGCGC          TTTCTTAAATTAAGA  88 39
SH07_RS03315 NONE
        iraD  677092 ..  677114 +  -4.1  -3.05384   ATGCATAGGCCTGAA           TCGGGATCA CCAGT TCGTCCCGA           TTCAGTACAACGAGC  46 113
SH07_RS03345  681198 ..  681217 +  -5.6  -3.16676   GCCGCGCCGCAGAGA            GTGGCGCT GGCA AGCGCCGA             TGTTCCATTGCTGAG  52 120
SH07_RS03385  689669 ..  689682 +  -5.3  -2.60723   GGCATCCGGCATGAA               CAAAG CGTA CTTTG                CTTAATTCAGGCTGG  49 157
SH07_RS03395  691679 ..  691715 + -11.2  -2.64981   CTCATGTCGATAACG   GTCAAAAAACGCACAGT GATT ACT-TGTGTTTTTTGAC    TGACTTTACAACTCT  76 170
SH07_RS03400  693730 ..  693750 +  -5.4  -3.08197   CACGGTACACCGCTC            GACAAAGG CTGGC CCTTTGGC            TATGTGTATGTGAAC  53 205
SH07_RS03405  696480 ..  696510 + -11.8  -4.53705   CGCCTCCTGATGATG       AGCCGCTCCCGATG TGG TGTCGGGAGCGGTA       TTTTCTATAAAACTT 100 31
SH07_RS03445  708837 ..  708856 +  -4.3  -3.64703   TGCGGCTCCAACGTG            TC-ACGGC CGGAT GCCGTCGA            TTTAGATCCGAAAGC  54 129
SH07_RS03450  709661 ..  709671 +  -2.4  -4.18018   GTTTATCCGCCGACT                 CCAG CAG CAGG                 TTTTCCATCACGCGG  58 280
SH07_RS03475  714965 ..  714986 +  -5.8  -2.77899   TACGCCAGTGCCCCC           GCTGCGGT GACGCA ACCGCAGA            TGATTAGTGCCAGAC  51 135
SH07_RS03490  718583 ..  718609 +  -5.8  -6.32017   ATTAAAGTTGCCATG         CAGCGTCCGG GGAAGTG TTGGGCGCTG         TTTTTTTTGTTTCTT 100 53
SH07_RS03525 NONE
SH07_RS03530  726540 ..  726551 +  -2.2  -4.36914   GTGGATTATCTTCAC                CGTT CGTG AGCG                 TTTTCTCAAAAAAGA  60 185
SH07_RS03540  727955 ..  727967 +  -4.9  -3.14132   TTCGCATACCATCAA                TTCTT AAA AAGAA                TTGCTACCACGGAGG  51 397
SH07_RS03565 NONE
        rimI NONE
SH07_RS03575  730922 ..  730936 +  -9.2  -3.14132   TCGTTTTCAACAAGC               GCGGCG CGA TGCCGC               TTACTCAAGAAGAAA  72 81
        prfC  732557 ..  732582 + -14.7  -2.68338   ATTAATTCTTGCCTC         CAGGGCGCGGT AGCC GCTGCGCCCTG          TCAATTTCCCTTCCT 100 36
SH07_RS03585  733614 ..  733628 +  -4.2  -2.62396   TAAAAATATCGCATT               GAGTGA TTT TCACGC               TCATATCAAGCGGTG  45 95
SH07_RS03590  733864 ..  733882 + -14.6  -4.28049   AAAATTTTATCCAAA             GCCAGTCC AGC GGACTGGC             TTTTGCGGTTTTAGC 100 57
SH07_RS03595 NONE
SH07_RS03600  735922 ..  735961 + -11.5  -2.62003   CGGATAAGGCGTTCA  CGCCGCATCCGGCAGTTG GCGCA CAA-TGCCTGATGCGACG  CTTGTCGCGTCTTAT  80 144
SH07_RS03615  738825 ..  738835 +  -3.2   -3.3761   AGAATACTAACAAAC                 TCGC AAG GTGA                 ATTTTATTGGCGACA  47 89
SH07_RS03620 NONE
SH07_RS03625  741103 ..  741113 +    -4  -3.84451   CGAATAACGGTATAC                 TGAT CTG ATCA                 TTTAAATTTGAAGCA  57 34
SH07_RS03630  742378 ..  742397 + -10.7  -4.38927   GTTCTGATGGATTTG            GGCGGAG CGTTGA CTCCGCC             TTTGTTATGTCACAA 100 34
        deoD  743179 ..  743202 +   -16  -4.87037   CGATTGCCTTGTGAA          GCCGGAGCGG GAGA CTGCTCCGGC           TTTTTAGTATCTATT 100 59
SH07_RS03640  744623 ..  744644 + -12.3  -2.52464   CAAATCGAAGAGAAA           GTTGCCCGC ATGG GCGGGTAAC            TACCTTACAGCCCCC  86 5
        serB NONE
SH07_RS03660 NONE
SH07_RS03665 NONE
SH07_RS03670  750358 ..  750387 + -13.5  -3.08581   TTGCTGGTTTTGTAG       GCCGGATAAGGCG TTCG CGCCGCATCCGGC        ATTTTACGCATTACT 100 92
SH07_RS03680  754224 ..  754240 +  -4.5  -2.61144   ACTGATCCGCACGTT              TATGATA TGC TATCGTA              CTCTTTAGCGAGTAC  48 36
SH07_RS03685  755122 ..  755137 +  -8.2  -3.76224   TTGGCTACCCGATTT              CGTGCG CCAG CGCGCG               TTTCCTCACTGCCAA  72 518
SH07_RS03695  756257 ..  756269 +  -6.3   -3.1829   CTGGGCTAACGCGGT                GGTAT AGA ATACC                TCTTGCTCGTCGTCT  54 295
SH07_RS03705 NONE
SH07_RS03710 NONE
SH07_RS03715 NONE
SH07_RS03720  761090 ..  761107 + -12.7  -5.76949   GTTGAAAAATAAAAA             CGGCGCT AAAA AGCGCCG              TTTTTTTTGACGGTG 100 42
SH07_RS03730  762275 ..  762285 +  -2.6   -3.4252   ATTGTCGAGATTTAT                 TTTT TAT AAAA                 TTATCCTAAGTAAAC  48 215
SH07_RS03735  763302 ..  763323 +  -4.5  -2.91322   TGAGTAAATTAAAAT           TTTATTGAC TTAG GTCACTAAA            TACTTTAACCAATAT  50 156
        thrL  763475 ..  763496 +   -13  -6.06723   GAAACACAGAAAAAA           GCCCGCAC CTGACA GTGCGGGC            TTTTTTTTTCGACCA 100 41
        thrA NONE
SH07_RS03750 NONE
SH07_RS03755  768239 ..  768265 +    -8  -5.24129   CATTATCTCAATCAG        GCCGGGTTTGC TTTTAT GCAG-CCCGGC         TTTTTTATGAAGAAA  95 49
SH07_RS03760 NONE
SH07_RS03765  768759 ..  768792 + -11.7  -2.62043   CAATCCGGCATTCAG     CGCCTGATGCGACGC TGGC GCGTCTTATCAGGCC      TACGTTAATTCTGCA  80 59
SH07_RS03780  772393 ..  772422 + -12.9   -2.5294   CTGCTGTAATCATTC       TTAGCGTGACCGG GAAG TCGGTCACGCTAC        CTCTTCTGAAGCCTG  90 32
        mogA  773153 ..  773167 +  -4.2  -3.13164   ATCGGCAGAACGGTG               CGACCA AAC TGCTCG               TTCAGTACTTCACCC  47 90
        dnaK  777299 ..  777336 + -17.1  -3.25823   AACGGGTAATTATAC   TGACACGGGCGAAGGGGA ATT TCCTCTCCGCCCGTG-CA   TTCATCTAGGGGCAA 100 51
SH07_RS03810  778582 ..  778603 +  -4.4  -3.52073   GTGGCGGGGATCACT           CCCATAAG CGCTAA CTTAAGGG            TTGTGGTATTACGCC  52 115
SH07_RS03815  780162 ..  780194 +  -4.9  -4.64844   TTCAGCATATAGGAG     GCCTCGGGTTGATG GTAAAA TATC-ACTCGGGGC      TTTTCTCTATCTGCC  71 436
        nhaA  781865 ..  781884 + -10.7  -4.59414   CAGGACGGTTTACCG            GGGAGCC ATAAAC GGCTCCC             TTTTCATTGTTATCA 100 41
        nhaR  782821 ..  782847 +  -5.1  -2.62043   GTGCGTTAATCGGCA         GCTCCCCCA AAGTTAAGG TGGGGGAGA         TAGATTAGTTGTACA  49 32
SH07_RS03845 NONE
SH07_RS03850  785534 ..  785547 +  -3.7  -3.54475   TTTGGGCTAACAAAA               CCGGC TTAA GCCTG                TTATGTAATCAAACC  51 17
        ileS NONE
        lspA  788923 ..  788972 + -18.1  -3.53811   GATGCGATGCTGACG CATCTTATCCGGCCTACAGATTGC TGC GAAATC-GTAGGCCGGATAAGGCG TTTACGCCGCATCCG 100 53
SH07_RS03865 NONE
        ispH  790450 ..  790469 +  -9.3  -5.24129   TAAGTTATGCGAAAA            TGCCGGT CTTGTT ACCGGCA             TTTTTTATGGAGAAA 100 54
SH07_RS03875  791418 ..  791445 +  -6.4  -3.70149   CTGTCACATGTTATT        GGCATGCAGTC ATTCATC GACT-CATGCC        TTTCACTGATATCCC  63 42
SH07_RS03880  792380 ..  792399 +  -2.2  -4.35483   TGTACTTGATCTCAA            TAATTTGT AACC ACAAAATA             TTTGTTATGGTGCAA  58 16
SH07_RS03895 NONE
        carB  797286 ..  797305 +   -10  -6.07627   ATCGAATAACTAATA            CGGTTCTC TGAT GAGGACCG             TTTTTTTTTGCCCAT 100 79
SH07_RS03910  797998 ..  798020 +  -8.4  -4.33165   TAGGCGTCACATCCG           TCGTCCCC TGCAAAC GGGGGCGA           TTTTCCTCCATTTGC  82 134
SH07_RS03945 NONE
SH07_RS03950  807299 ..  807310 +  -5.8  -3.58037   GAAGATCCTTCCGGC                GCTG ACCG CAGC                 TTTAGCGCGTTGATC  61 1
SH07_RS03955 NONE
SH07_RS03960  808931 ..  808941 +  -2.4  -2.83798   CCTTTGGTGTGGAGT                 TCCG TTA CGGC                 TGATGTTGGTTTGAT  41 12
SH07_RS03965 NONE
SH07_RS03970 NONE
SH07_RS03975  812955 ..  812967 +  -3.3  -3.72363   ACATCATCCTCGCAC                CAGTC GAC GACGG                TTTACGCTTTACGTA  51 155
        folA  813521 ..  813553 + -15.6  -2.58999   GAATTTACGGCTAGC      GCCGGATGCGACGC CGGTC GCGTCTTATCCGGC      CTTCCTATATCAGGC 100 50
        djlA  821412 ..  821431 + -11.4  -3.90744   TGCCCACGATTAAAG            GTGGCCGC CCTG GCGGTCAC             TTCTTTGAGAAAAGG  95 64
SH07_RS04020  822813 ..  822828 + -10.4  -4.03234   GGCAGAAACAAAAAA              TCCCCG GACT CGGGGA               TTTATGTACAAGAGG  89 365
SH07_RS04055  834509 ..  834521 +  -4.8  -3.25088   AGTAGCATAGGGTTT                GCAG AATCC CTGC                TTCGTCCATTTGACA  53 75
SH07_RS04060  835339 ..  835353 +  -7.1  -3.30124   CGGGTTGCCTGATGC               GACGC TTGCC GCGTC               TTATCAGGCCTACAA  64 55
SH07_RS04085  840759 ..  840779 +  -9.7  -6.17268   GTGTAAAATCACCCG            CCAGCAGAT TAT ACCTGCTGG            TTTTTTTTATTCTCG 100 71
SH07_RS04090  842478 ..  842488 +  -4.6  -4.72272   ACGAAGTCCGGGTTT                 GGCT GTT GGCC                 TTTTTCATCCAGAAA  72 510
        leuO  848512 ..  848551 +   -16  -5.49234   CAAACGCTAACTGAT  TGCAGAATAGGTCAGACA TGAA TGTCTGGTTTATTCTGCA   TTTTTTATTGAATGT 100 31
SH07_RS04125 NONE
        ilvH  851032 ..  851061 +  -2.1  -3.53091   CGCGCGGCGATAAAA       TAATGCGTTGAGA ATGA TCTCAATGCGCAA        TTTACAGCCCAACAT  47 15
SH07_RS04135  851172 ..  851194 +  -2.8  -4.87318   GTTAATGAATTTAAC          CCATA-CCA GTACAA TGGCTATGG           TTTTTACATTTTACG  67 57
SH07_RS04140  852432 ..  852447 +  -6.8  -2.72043   TTATTTTGTTACATG              CGGCGA TGAA TTGCCG               ATTTAACAAACACTT  56 231
SH07_RS04145 NONE
SH07_RS04150 NONE
SH07_RS04155 NONE
SH07_RS04160 NONE
        murE NONE
        murF NONE
        mraY NONE
        murD NONE
SH07_RS04185 NONE
        murG  863909 ..  863930 +  -3.8  -2.64651   GCCCGGGCGTAATTG           TAGCGATGC CTTTT GCATCG-TA           TGAATTTAAGAAGTT  44 29
SH07_RS04195 NONE
         ddl NONE
SH07_RS04205 NONE
        ftsA NONE
SH07_RS04215  869700 ..  869721 +  -6.7  -3.09208   TGCTAAACTGGCCCG           CCGAA-TGTA TAG TACACTTCGG           TTGGATAGGTAATTT  59 75
        lpxC  870695 ..  870738 +  -4.5  -6.17292   CTGTCGTATAAAATT CGACTGGCAAATCTGGC ACTCTCTCCG GCCAGGTGAACCAGTCG TTTTTTTTTGAATTT 100 52
SH07_RS04225  871441 ..  871457 +  -5.7   -2.8704   TACTTCATTTTATTA              ACTCCGC AAC GCGGGGC              GTTTGAGATTTTATT  53 55
        secA  874200 ..  874217 + -12.7  -5.33866   ACTGTTGAAGTAAAA             GGCGCAG GATT CTGCGCC              TTTTTTATAGGTTTA 100 47
SH07_RS04235  874744 ..  874773 + -12.1  -2.72144   AATTTGTTTTTGTAG       GTCGGATAAGGCG TTCA CGCCGCATCCGAC        ATTTGCACAAGATGC  83 142
SH07_RS04260  877690 ..  877715 + -16.2  -3.32963   CCTGTAATCTCCCAA         CGCTGGCGTG GAGCAA CACGCCAGCG          TTATCCCATCCCACT 100 34
SH07_RS04280  881211 ..  881233 +  -5.4  -4.57073   TCGACTTCTACTGGC           GCATCCGGGT GCA GCCAGGACGC           TTTTTCGACCGCCTG  72 247
SH07_RS04290 NONE
SH07_RS04295  883386 ..  883396 +  -2.4  -3.46586   ATTAATGCGCTTTTA                 CGGC TTT GGCG                 GTTTTCTCTTTAAAC  47 82
        pdhR  886055 ..  886080 +  -4.9  -3.24924   GAAAGAATTAGTGAT         TTTTCTGG-TAA AAA TTATCCAGAAGA         TGTTGTAAATCAAGC  53 30
        aceE NONE
        aceF  890790 ..  890807 + -14.1  -5.32882   GATGTAAGTAAAAGA             GCCGGCC CAAC GGCCGGC              TTTTTTCTGGTAATC 100 34
SH07_RS04320  892566 ..  892582 +  -6.5  -5.50499   CCGGCAATTAAAAAA              GCGGC TAACCAC GCCGC              TTTTTTTACGTCTGC  91 61
SH07_RS04330  897442 ..  897467 + -12.7  -6.02919   GCATAAACGACACAA         TGCCCGGTGAAT GAG ATTC-CCGGGCA         TTTTTTTATTTCTAA 100 61
SH07_RS04335  898030 ..  898067 +  -3.5  -3.19293   CTCGCGCATTTCTTT  CC-ACAGCGCAGCGGTA ATTTCC TGGCGCT-CGCTGTCGG   TTAAGTCTTCCGGTT  47 111
SH07_RS04355  901820 ..  901835 +  -3.2  -3.03771   TGATGTTAGGGTTTA              CGGTAT AAAA AGACCG               TATTCGGAAATATGC  44 18
SH07_RS04365  905165 ..  905198 +  -3.1   -5.4182   CTGGACGAGTAAGTG     TGAAGTTGCCGGATGT GTT GCATCCGGCA-TGGCA     TTTTTATTTGTGGTT  82 29
SH07_RS04375 NONE
SH07_RS04380  907673 ..  907702 +  -9.3  -4.10657   CGTAGCTAAGGCTAT       TTCCTCTCCTCTG GATT TGGGGGAGAGGAG        TTTTGACGGCTATCA  85 32
SH07_RS04385  908228 ..  908249 +  -5.2  -3.92542   CCGCGATTCTGATGG           CGCTTTTG CTACAA TAAAAGCG            TTGTTTCACCCTCGG  63 42
SH07_RS04390  909921 ..  909935 + -11.4  -3.56099   CCTGTCGTTAACGAA               GCAGGC GAT GCCTGC               TTTGAGGAAATTCTC  89 442
SH07_RS04400  911106 ..  911130 +  -7.8   -3.1855   GGGGTAAATTAATAA          CTGGCGCCAT CAGCC GTAGCGCCAG          TTAAGTATTACGCCA  63 67
SH07_RS04480 NONE
SH07_RS04485 NONE
        mrcB  930583 ..  930602 +  -9.2  -3.68662   GCTCAGATTGCGTAC            CGCTTGCG AACC CGCCAGCG             TTTCGAATATTATCT  78 150
SH07_RS04495  932933 ..  932952 +   -15  -2.74322   CTAATTTCTCTTTTG            GGGCACGG ATTT CCGTGCCC             ATTTCACAAGTTGGC 100 37
SH07_RS04500 NONE
SH07_RS04505 NONE
SH07_RS04510  936707 ..  936720 +  -8.1  -3.30124   ACGGATGCCCGATGC               GACGC TGGC GCGTC                TTATCGGGCCTACAA  66 94
SH07_RS04520 NONE
SH07_RS04525  940158 ..  940186 + -14.7  -3.68024   ATCTAATCTGTTGTT        CATGTGCCGGATA AAC TATCCGGCACATC        TTCTCTCTTCAACGC 100 35
         dgt NONE
SH07_RS04550  945513 ..  945536 + -14.6  -3.52093   AGTAATCTCCCTCAA          CCCCTTCCTG AAAA CGGGAAGGGG           TTCTCCTTACAATCT 100 36
SH07_RS04555  947161 ..  947175 +  -7.1  -4.40003   AAACTTAACGCTCTT               GGCGA AAAAC TCGCC               TTTGTCTTTCTGGAA  75 372
SH07_RS04585  953968 ..  953988 + -11.1  -4.89729   GTACACGTTTGGTTA            GGGGGCC TGCATAT GGCCCCC            TTTTTCACTTTTATA 100 200
         tsf  954913 ..  954934 + -13.7  -4.84761   CTTAATTATCAAAAA           GGAGCCGCC TGAG GGCGGCTTC            TTTTTGTGCCCATCT 100 36
SH07_RS04595  956029 ..  956047 +  -3.1  -4.11751   ACTGTGTGTGACTGT             CTGGTCT GACTG AGACAAG             TTTTCAAGGATTCGT  58 280
         frr  956636 ..  956684 + -11.8  -5.27206   TGATTTCTTGAACGA CAAAAACGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCGTTTTGC TTTTTATTCTGTCTC 100 38
SH07_RS04605  958016 ..  958033 +  -8.4  -6.02914   TATAAGGTCAGATAT             GCCGTG GTTTTA CACGGC              TTTTTTTTGTATAGG 100 130
SH07_RS04610 NONE
        cdsA NONE
SH07_RS04620  961080 ..  961095 +  -5.4  -3.33696   ACTTTTCAATGATTT              CTCTCG GTTA TGAGAG               TTAGTTAGGAAGAAC  55 13
SH07_RS04625 NONE
SH07_RS04630 NONE
        lpxD  965217 ..  965254 + -12.7  -4.07515   TTGTTCGCCAAACTT   TACGGCCTGTCTCATTC TTAC GATTGCGGCAGGCCGTG    TTATTATTGTCGTTT 100 52
SH07_RS04640  965733 ..  965754 +  -4.3  -2.79098   ACGATGATGTGTGCT           CGTAGCCGG GAGG CCTGATACG            TGATTGATAAATCCG  46 8
SH07_RS04645 NONE
        lpxB NONE
        rnhB  968269 ..  968280 +  -5.8  -3.01243   GTCAAACGCGCACTG                GGAC TTGC GTCC                 TGATTCTTGTGTCGA  54 11
        dnaE NONE
SH07_RS04665  972795 ..  972812 +  -9.1  -5.24129   AAAAGTTCTGAAAAA             GGGTCAC TTCG GTGGCCC              TTTTTTATCGCCACG 100 46
SH07_RS04670 NONE
SH07_RS04675  975480 ..  975500 + -13.3  -3.24925   TGTCATCGCCGCATT            TGCCCGGTA ACG TGCCGGGCA            TTGCTACTGTAAAAT 100 45
        tilS  977156 ..  977169 +  -8.1  -4.65895   ACCAGTAAGTTTGCC               GCAGC GTAT GCTGC                TTTTTCCCTGACAGC  84 358
SH07_RS04695 NONE
SH07_RS04700 NONE
SH07_RS04705  979305 ..  979318 +  -8.1   -3.4252   CTCAACGCCTGATGC               GACGC TGGC GCGTC                TTATCATGCCTACAA  68 157
SH07_RS04745  986738 ..  986752 +  -6.4  -3.12351   GGTTGAAGAGAAAAA               TCCTGA AAT TCAGGG               TTGACTCTGAAAGAG  57 161
SH07_RS04750  988527 ..  988540 +  -2.3  -2.72471   AAGAAGCGTACTTTG               CAGTG CTCA CACAG                ATTGTCTGATGAAAA  40 34
SH07_RS04755  988654 ..  988666 +  -6.3  -3.57309   CTCAGGCCTACCAAA                TTTGC ACG GCAAA                TTTGAAGAGGTTTTA  63 28
SH07_RS04760  988796 ..  988829 +  -6.7  -4.49756   GTTAAATAAAAAATA     CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG      TTTTGCTCTTTAAAA  76 52
SH07_RS04765  991933 ..  991946 +  -2.4  -2.78679   AGAACGCAGAAGCGG               TCTG ATAAAA CAGA                ATTTGCCTGGCGGCC  41 85
SH07_RS04770  992086 ..  992101 +  -6.1  -2.82742   AAATTAAGCAGTAAG              CCGGT CATAAA ACCGG               TGGTTGTAAAAGAAT  55 44
SH07_RS04775  992211 ..  992230 +   -10  -5.92337   CCACTTATTAAGAAG            CCTCGAGT TAAC GCTCGAGG             TTTTTTTTCGTCTGT 100 38
        dkgB  993175 ..  993192 + -11.3  -4.68593   ATTAAGCCTCTCTGA             CAGCTCC TCCG GGAGCTG              TTTTTACATGCTCGC 100 36
SH07_RS04790 NONE
SH07_RS04795  995752 ..  995772 + -10.4  -5.25699   GGCATAAATAAAAAA            GGCACCGG GGGAA TCGGTGCC            TTTTTATTATCTGGT 100 34
SH07_RS04810  998756 ..  998768 +  -4.1  -3.14132   TTGGTAGCCTGTATC                TTCCA GTG TGGGA                TTCATCGCCGCGGCA  47 49
SH07_RS04820 1000019 .. 1000029 +  -2.4  -3.33744   AGGCGCTAAAAATAG                 CGAC TTG GGCG                 ATTTTTGCAGCAAAC  45 52
SH07_RS04825 1000232 .. 1000254 + -11.4  -5.88197   AATGAGTTCAGAGAG           CCGCAAGATT TTT AATTTTGCGG           TTTTTTTGTATTTGA 100 56
SH07_RS04830 1001608 .. 1001621 +  -5.3  -3.14229   GGAGCTATTAAAGGT               GCTAT TACG ATAGC                TATTAGTAAAAATAT  52 319
SH07_RS04845 1003007 .. 1003019 +  -4.7  -3.00918   CATTCCACAATCACT                CGCGC ATT GCCCG                CTTTATAATGTAGAT  48 460
SH07_RS04855 1004027 .. 1004044 + -12.7  -3.89354   TAGCGGATAAAGAAA             CGGAGCC TTTC GGCTCCG              TTATTCATTTACGCG 100 42
        gmhA 1007380 .. 1007393 +  -8.1   -3.4252   GCTGATGCCTGATGC               GACGC TGAC GCGTC                TTATCATGCCTACAA  68 90
SH07_RS04870 1008294 .. 1008309 +  -7.6  -3.21912   TGTAGTTTGATGCCA              GTTGTG GCTG CACAAC               TTCGTGGCTTAACGG  61 31
SH07_RS04890 1010666 .. 1010719 + -10.1  -2.56747   TGTAGGACGGATAAG GCGTTTACGCCGCATCCGGCAGTTG TACG CAGGTGCCTGATGCGACGCTGGCGC GTCTTATCATGCCTA  70 36
SH07_RS04895 1011350 .. 1011363 +  -8.1   -3.4252   GCAGATGCCTGATGC               GACGC TAGC GCGTC                TTATCATGCCTACAA  68 47
SH07_RS04905 1013999 .. 1014017 +  -5.2  -3.10343   TGGATAAGCAGCAGG             TGCTTTCG CAG CGAACGCG             TTAAATGCTGAATCT  53 3
SH07_RS04910 NONE
SH07_RS04915 NONE
SH07_RS04920 1015872 .. 1015882 +  -2.4  -2.87035   TGGGAAAATGGCAGA                 AGCG TTT CGCA                 TGCGTTTTTGAATTT  41 4
SH07_RS04925 1016378 .. 1016398 +  -3.1   -4.5442   TTGCAATGAAAATAA            CGCCCGCCT GGT ATGTGCGCG            TTTTCTGATTCCACA  63 48
SH07_RS04930 NONE
        prfH 1017572 .. 1017593 +  -2.2  -5.00616   TTGGCCCGATAGAAA           CCATGTCC ATTTCC GGATACGG            TTTTTTGAACAGACC  71 201
SH07_RS04945 1019636 .. 1019660 + -17.9  -4.47888   GGTCGCTAATCTTTT          CAACGCCTGGC ACT GCCGGGCGTTG          TTCTTTTTAACTTCA 100 32
        frsA NONE
SH07_RS04955 1021433 .. 1021455 + -13.5  -2.54276   GGCGTGAGTGAAATG           TGCCGGATG CATCA CATCCGGCA           ATATTCATTAAAACT  91 34
SH07_RS04965 NONE
SH07_RS04970 1025181 .. 1025235 +  -8.4  -3.69437   CGTGCGTAAATAAAA CCGGGTGATGCAAAAGTAGCCATTTG ATT CACAAGGCCATTGACGCATCGCCCGG TTAGTTTTAACCTTG  73 32
SH07_RS04975 1025513 .. 1025524 +  -2.2   -3.9941   CGCTCACTATACATC                CTTG GCTG CAGG                 TTTAGTTGTACACCA  53 174
SH07_RS05035 NONE
SH07_RS05040 NONE
SH07_RS05045 1034743 .. 1034763 +  -8.2  -2.62396   ACCTGAGCGGCAGTG            ACCTGCGG CATGC CCGCAGGG            TGATGTAACCCGCTG  63 95
SH07_RS05060 1036408 .. 1036418 +  -5.4  -4.22748   GAAATTCTTCTCGGC                 TGAC TCA GTCA                 TTTCATTTCTTCATG  65 24
SH07_RS05070 NONE
SH07_RS05075 1040132 .. 1040146 +  -4.2  -3.30124   CAGGCATTGCCGGAT               GGCG GCACAAG CGCC               TTATCCGGCCTACAA  51 92
SH07_RS05115 NONE
SH07_RS05120 1047600 .. 1047637 + -13.5  -4.45259   AATTATTTTAAGAGA   TAAAACCGTCTGCGGAA TATT TCCCGCAGACGGCTTTG    TTGTTTTTGAAATTT 100 39
SH07_RS05125 NONE
SH07_RS05130 1051183 .. 1051229 +  -9.3  -3.21993   GCGGTGGCGTGCACC GGCAGGC-GGCGGCCGATGCGT GAAT AGGCGATGGCGGCCAGCTTGCC TTCAATCTTCTCGAT  67 391
SH07_RS05150 1054630 .. 1054649 +  -5.8  -2.88579   TATTTAGTAGCGGAC            TTGCTGAT GACT ATCAGTAA             TCTATAGAAAATTGC  53 6
SH07_RS05185 NONE
SH07_RS05215 1066036 .. 1066066 + -12.8  -2.52795   TAATGCATTGAATGA       TAAAAATGGCGC AAATACA GCGCCATTTTTA       TAGGTTAAAAACATT  90 38
SH07_RS05255 NONE
SH07_RS05275 NONE
SH07_RS05280 NONE
SH07_RS05285 1078906 .. 1078916 +  -2.4  -2.62851   GGGTAGGATCATAAA                 GTCC TCG GGTC                 GTTGTCCACTCTTTT  38 60
SH07_RS05310 1083778 .. 1083791 +  -5.3   -3.1811   GTATAAGGGATGTAG               CCATT TTTA AATGG                ATTTCTTATGCCAAA  53 304
SH07_RS05315 NONE
SH07_RS05320 NONE
SH07_RS05325 1086985 .. 1087011 + -13.2  -3.59979   CTGCTCTTCTGTAAA         TATCCTGGTATT ACC AATGCCAGGATA         TTTACAGTGAAAAAG  93 139
SH07_RS05355 1093931 .. 1093956 +  -9.7  -3.99062   TGTTATTGCATAAAA         CCGCGCCATGT CTGC ATATGGCGCTG          TTTCTCCTACCTCTT  86 42
SH07_RS05365 1095965 .. 1095981 +  -3.7  -5.15634   ATCCCCGTTAATATG              CCATTTG GCG CAAATTG              TTTTTTAATCCACTG  79 113
SH07_RS05380 NONE
SH07_RS05385 NONE
SH07_RS05390 NONE
SH07_RS05395 NONE
SH07_RS05400 NONE
SH07_RS05405 NONE
SH07_RS05410 1105046 .. 1105065 +  -3.4  -3.29074   TATCACACTTACAGG            CGCTCGCC TTAT GGGGAACG             TTGCTGCTCTGTTTC  47 239
SH07_RS05415 1106441 .. 1106458 +  -2.7  -4.38927   GCGATTTCTGATAGT             GC-CTGGT TTA ATCAGAGC             TTTATTATCTGCGAC  59 208
SH07_RS05420 1107401 .. 1107412 +  -5.8   -3.2657   ATCTGTATATCTGTA                TGCC AACT GGCA                 TTCCATCTCTTTTTT  57 110
SH07_RS05425 1108380 .. 1108390 +  -2.4  -2.64099   ACCATAAGAGATAAG                 CGCC GCC GACG                 ATTCTGATAAGCGAA  38 431
SH07_RS05435 1109167 .. 1109186 +  -2.8  -4.07568   GGATAAAGCGTTCGC            GCTGCATT CGGC AGTTCAGC             TTTTCAGCCGCCGCC  54 108
        prpB 1111939 .. 1111952 +  -8.1  -3.30124   GCCGATGCCTGATGC               GTCGC TGAC GCGAC                TTATCAGGCCTACGA  66 67
SH07_RS05450 NONE
        prpD NONE
        prpE 1116930 .. 1116985 + -11.1   -4.4767   TAGGTTATTGTCGGA TGCGTCGCGCGGTGCATCCGGCACTG TGTGC CGATGCCTGATGCGACGC-TGACGCG TTTTATCATGCCTAC 100 38
        codB NONE
SH07_RS05470 1119818 .. 1119829 +  -7.2  -3.30243   GTTTATGCCGGATGC                GGCG TGAA CGCC                 TTATCCGGCCTACGT  64 64
SH07_RS05480 NONE
SH07_RS05485 NONE
        cynX 1123537 .. 1123561 + -12.9  -2.75822   TCGCTGAACTTGTAG          GCCTGATAAGC GCA GCGTATCAGGC          AATTTTTATAATTTA  91 91
        mhpA NONE
        mhpB NONE
SH07_RS05530 NONE
SH07_RS05535 NONE
SH07_RS05540 NONE
SH07_RS05545 1137322 .. 1137375 + -14.7  -2.57931   TAGGTCTGATAAGAC GCGTTAGCGTCGCATCAGGCA-TC TGCGCAC GACTGCCGGATGCGGCGTGAACGC CTTATCCGGCCTACG 100 141
SH07_RS05550 1139061 .. 1139083 +  -4.1  -3.53091   GCGTTTACAGGTATA           CTCGCTAAA AATTA TTCAGCGGG           TTTGGAAACAAAGAT  52 91
SH07_RS05555 1139734 .. 1139772 +  -9.5  -2.76583   CGGATAAGGCGTTCA  CGCCGCATCCGGCA-GTC GTGC GCCATGCCTGATGCGACG   CTTTGCGCGTCTTAT  70 123
SH07_RS05585 NONE
SH07_RS05590 NONE
        tauA NONE
        tauB NONE
SH07_RS05615 NONE
        tauD 1151021 .. 1151058 +  -6.3  -3.85698   AGAGGGTTAGGGTGA   GGGGGCGTTCACC-GT ACTTTCA ACAGGTTAACTCCCCC   TTTCTGAGAGGAAAC  65 75
SH07_RS05635 1154345 .. 1154374 +  -3.6  -3.01712   AGTACTGGCCTCCAC      GGTCCGTGTGAACG ATAA CGTTC-CG-GGGCC       TCTTACGCCGCCACA  46 268
SH07_RS05650 1156787 .. 1156810 + -15.4  -3.14132   ATTTAATCTAAATAA          TGCCCGTCAA GGAT TTGACGGGCA           TTACTGCAAAGGACG 100 69
SH07_RS05655 1157462 .. 1157489 + -11.4  -3.07816   AGTATTAATCAGGAC        GCGGGGAT-AACC AAC GGTTTATTCCCGC        TTAGCTCGGTCACCA  84 33
SH07_RS05665 NONE
SH07_RS05670 NONE
SH07_RS05675 1161621 .. 1161634 +  -2.3  -4.08767   GCATTGCGATATTTT               CCGCT AAAC AGCGA                TTTTGACAGGGTGAA  56 355
SH07_RS05685 1162296 .. 1162318 +  -6.3  -3.49886   GTGAAGCCAGGCAGG           GTGTTGATC TCGTT GATCACCAC           TTCGTTCTCTGGGGT  58 191
SH07_RS05695 1163507 .. 1163525 +  -5.4  -3.27298   GAATATATTTCATAA             CTTTTATT TAT AATAAAGG             TTGATAATTAAAAGC  55 3
SH07_RS05700 1164014 .. 1164028 +  -4.2  -5.21459   AAAGTTGTCACGGCC               GAGACT TAT AGTCGC               TTTGTTTTTATTTTT  78 68
SH07_RS05705 1165492 .. 1165523 + -14.4  -5.63374   GGCTGAAATAAAACC      GCGCCCGGCAGTGA ATTT TCGCTGCCGGGTGG       TTTTTTTGCTGTTAG 100 30
SH07_RS05710 1165940 .. 1165973 +  -7.4  -2.87963   GATACCTGATAGTGC     TAACGGGTGAGCTA CGAAAA TGGCTCACCCGAAA      TATCATACTTCTGCC  59 39
        adrA 1167344 .. 1167363 +    -2  -3.87815   ATTTTTGCGGAACCC            ATTACCGC CTGA GCGGCAAA             TTTATACGCCTGGGC  54 226
SH07_RS05725 1168613 .. 1168629 +  -5.9  -5.64421   GGGGTGTATTGAGAT              TTTCACT TTA AGTGGAA              TTTTTTCTTTACAAT  95 91
        aroL 1169244 .. 1169254 +    -4  -4.08394   CCCTGGCACAGACGA                 TCAA TTG TTGA                 TTTTCGAGCGCCTAT  61 15
SH07_RS05735 NONE
SH07_RS05740 NONE
SH07_RS05745 1170419 .. 1170430 +    -3  -4.18018   CGGCTGGCTGCGGAA                TTAC TGGT GTAA                 TTTTGCGTGACAGCC  58 14
SH07_RS05750 1170792 .. 1170816 +  -6.3   -4.8667   CTATCTGTAATTCCT          CGCCTTCCCCT TGA ACGGGAGGGCA          TTTTTCTGAAATATC  80 31
SH07_RS05755 1171336 .. 1171355 +  -2.8  -3.53164   CTGCGCTAAAAATTA            TTGCTCGC CGTA GCGAATAA             TTATATGCCTGGTGT  48 86
SH07_RS05765 1173846 .. 1173856 +  -8.2   -4.4648   CACCTAATAACTCTC                 CGCC TTT GGCG                 TTTTGTAGTAACAAT  85 494
SH07_RS05785 1180158 .. 1180185 +  -7.6  -3.68962   CAACCCGCTTTTAAC        GCCTTGCTCATC GGAC GCAGAGCAGGGC         TTATGATTTCTTAAC  70 27
        phoR 1181536 .. 1181557 +  -9.5  -4.88918   CATCTTTTATTGCCA           TAAGCCAGT CGAT GCTGGCTTA            TTTTCTTTGCAGTCA 100 52
SH07_RS05795 1183257 .. 1183280 + -15.3  -5.64304   GAACATTTGTTTTAA          CCACGGGGC TGCGAT GCCCCGTGG           TTTTTTATTGTGTTG 100 47
        proY 1184701 .. 1184729 + -14.6  -3.03338   CCTTGCGTTCTGTAA        GCCGGTTCAGGA GGAAA TCCTGATCCGGC        TATTCCGAAAGTTAT 100 42
SH07_RS05805 1186789 .. 1186803 +  -5.6  -3.58533   TCCAGACGTGGGCGG               CGGCTT GCC ATGCCG               TTTAACACGTTCTGG  58 157
        queA 1188393 .. 1188417 +  -9.9   -2.9162   AGGCAATTAATGAGC          GCGTCGGGGAG TAA TTCCGCGGCGC          TGGTTTAAAACGTTG  73 12
         tgt NONE
        yajC 1189925 .. 1189939 +  -2.7  -2.93361   CCGTCCTGCCGAAAG               GCACC ATGAA GGCGC               TGTAATTAAAATTTT  43 6
        secD NONE
SH07_RS05835 1192826 .. 1192845 +   -10  -5.92337   CGTTGATGTTGAAAA            TCCCGGTC AGAA GATCGGGA             TTTTTTTTGATGTAT 100 50
SH07_RS05840 NONE
SH07_RS05845 1193424 .. 1193444 + -12.6  -4.30576   GTTAACAATCAGAAA            TGCCGGGA ATAAA TCCCGGCA            TTTTCATAATCAGAA 100 36
SH07_RS05860 NONE
        ribD NONE
        ribH NONE
        nusB 1197888 .. 1197928 +  -7.7  -5.43553   AAAAAGTGATATCCA GGCCGGTAGATTCACGGAA GACCG TTCCATG-ATC-GCCGGCC TTTTCTTTTTTACCT 100 32
SH07_RS05880 NONE
SH07_RS05885 1199440 .. 1199482 +  -6.2  -2.73829   TGTCGTAGTTGTGCA CCGATGCCTGATGTGACG CTTGTCA CGTCTCATCAGGCCTGGA CTCTTATTTAAATCC  55 33
SH07_RS05910 1205336 .. 1205359 + -15.4  -3.55444   AATTTGTGGTTTTTA          CGTCGCATCT GGTC AGATGCGACG           TTTGCCGCATCCGAC 100 39
SH07_RS05925 1207607 .. 1207647 +  -9.7  -3.58726   ATAAGCGTAGCGCAG  CAGGCAATTCGCCGCGTTT TTT ATGCCTGACGAATTGCCTG  TTCTATCTCAAAGCG  80 133
SH07_RS05970 1217109 .. 1217120 +  -5.8  -2.75343   GGAGCAGGAAGCATC                GCGT AAAA ACGC                 ATTTGCAACTGTCGG  53 20
SH07_RS05975 1217299 .. 1217320 +  -3.6  -2.66232   TCGACTCATAAAAGT           GATGCCGC TATAAT GCCGCGTC            CTATTTGAATGCTTT  44 13
SH07_RS05980 1218791 .. 1218814 + -12.4   -5.9873   TAAATTCGCACAAAG          GCCCGTCACC GCCA GGTGGTGGGC           TTTTTTTTGTCATGA 100 60
SH07_RS05985 1219631 .. 1219648 +  -4.7  -2.96274   TCGTAATTGATGCCA             GAGGCGC AACT GTGCCGC              TATACTTATCCAGGG  50 31
        clpX 1221059 .. 1221077 +   -11   -4.3623   TTAGTTAACCAAAAA             GGGGGGAT TTT ATCTCCCC             TTTAATTTTTCCTCT 100 59
SH07_RS05995 1223600 .. 1223629 + -13.6  -5.72616   CACTAATAAAAACAG       GGCTGGCAGGCT AATTCG GGCTTGCCAGCC        TTTTTTTGTCTCGCT 100 58
SH07_RS06000 1224084 .. 1224103 +   -10   -5.7827   GTGACGAAGTTCAAG            GGCGCATC TACT GATGTGCC             TTTTTTATTTGTATT 100 61
SH07_RS06005 1226160 .. 1226175 +  -8.2  -4.39571   GCTGTAACAAGAAAA              GGTCGC TTTC GCGGCC               TTTTCCATTTCTGAA  82 74
SH07_RS06010 1226670 .. 1226692 + -10.7  -2.96274   TTTTGCCAGACTGAA           GAGGTCATA CCAGT TATGACCTC           TGTACTTATAACAAC  79 62
SH07_RS06015 1227501 .. 1227527 +  -7.3  -4.21194   GGAGAAATCCGTTTC        GCAGACGCCAGT AATT AC-GGCTTCTGC         TTTTACCTGATACGC  72 401
SH07_RS06030 1230573 .. 1230588 + -11.8  -5.86332   AGATCCCTTCCAGCA              CCGGGC AATT GCCCGG               TTTTTTTTGCGTTGA 100 43
SH07_RS06035 NONE
SH07_RS06040 NONE
SH07_RS06045 1234779 .. 1234802 +  -8.9  -4.67038   GGTGCAAAAATGTAA          CGCACTGTG CACTGT CATAGTGCG           TTTTCATTTTCAAAC 100 62
SH07_RS06050 NONE
SH07_RS06055 1236594 .. 1236620 +  -7.3  -5.68023   AAGCACTGCAAAAAA        CAGCCGGACGGT TTTC ACC-TCCGGCTA         TTTTTTTAATTGTGA 100 42
SH07_RS06065 1238283 .. 1238310 +   -15  -2.71364   CAATATTAAGCGACG        TTAACCCTCTCC GCCC GGAGAGGGTTAG         TAGTTCCAGCGATAA 100 32
SH07_RS06075 1239810 .. 1239828 +  -5.2  -5.02074   TAGTGATTGATCATG             TCACGCAG CAA TTGCGGGA             TTTTTTCCGAGGTGA  80 485
SH07_RS06115 1248747 .. 1248764 +  -9.9  -2.51951   AACCCTGAATCTGAC             TCCAGGA TTTT TCCTGGA              CATTTTCGTCGTTGC  70 39
SH07_RS06120 1252664 .. 1252678 +  -9.2  -3.18681   CAGCGCATGGCGGCA               GCGTGC CAG GCGCGC               TTCATAGGCTTCCAC  67 466
SH07_RS06140 1253619 .. 1253634 +  -6.1  -3.04398   CAATTATTGCGTACA              GCCAG TACATT CTGGC               GTTTTCGAGCACAGG  56 60
SH07_RS06145 1254340 .. 1254364 +  -9.9  -3.09492   CACAAGATGTGCATT          CAGCCTCGCCG TTC TGACGGGGCTG          TGTTAGCATTACCCC  74 77
SH07_RS06150 1256350 .. 1256366 + -10.9  -3.25015   TCCGCCCCATTTGAT              CGTAAGC ACA GCTTACG              TTCGTCATCCTTAAC  81 27
SH07_RS06155 1256710 .. 1256723 +  -2.3  -2.64099   ATGCAGCTGCCGCCT               GGCTT TAAG ATGCC                GTTCTGATGCAAACC  40 5
        recR 1257344 .. 1257361 + -11.3  -2.55818   TTTTTAAGCAAACGA             GAGCAGG ATCA CCTGCTC              TCGCTTGAAATTATT  79 34
SH07_RS06165 1259325 .. 1259352 + -15.7  -5.50723   GGTTTCCTGATGTAA        TGCCGGATGAC CTTCGT GTCATCCGGCA         TTTTTCTTTTCATCA 100 31
         adk 1260240 .. 1260259 +   -10  -4.07885   TTATCAGCAATCTCA            GGCCGGAT ATTC ATTCGGCC             TTTTACAAAAACCTC  88 121
SH07_RS06175 1261367 .. 1261391 +  -5.7   -4.3129   GTAAAGAACTGAGCG         CCGTCG-CGA AGAGCC TCGTCGGCGG          TTTTCATCATCCGTG  70 50
SH07_RS06185 1263773 .. 1263802 + -12.1  -2.82803   ATCGTCGGTTCGTAG       GCCAGATAAGGCG TTCA CGCCGCATCTGGC        ATTTGGCTCTCGATG  83 44
        ushA 1269066 .. 1269077 +  -2.2  -5.24129   GGGGGCGTCGATAAT                CGTT GGCA GACG                 TTTTTTCTGCCCCAG  79 200
SH07_RS06215 1271065 .. 1271078 +  -8.1  -3.30124   ACCATTGCCTGATGC               GACGC TTAC GCGTC                TTATCAGGCCTACAA  66 206
SH07_RS06225 NONE
SH07_RS06230 1276203 .. 1276213 +  -3.2   -3.4298   GTATAACATCTCTCT                 GTGC GCA GTAC                 TTCCTGTATTATTGT  49 35
SH07_RS06235 1276896 .. 1276915 +  -2.1  -3.67792   CAAAACGTCGGCCAA            TCAGCTGC TGCCC GC-GCTGG            TTTAAATGACTATCG  49 196
SH07_RS06250 NONE
SH07_RS06255 1279690 .. 1279723 + -16.8  -2.81547   GAAGAAGAAATGATG     CGATGCCGGATGCG CAGCAT CGCATCCGGCGTTG      TGGTTCATGTGCCGA 100 28
SH07_RS06275 NONE
SH07_RS06280 1285171 .. 1285194 +  -6.7  -4.02653   TGAGAGTAAATAAGG          GGCGTTCTG GTTGAA TGGAACGCC           TTGTTTAAATTAATT  69 41
SH07_RS06285 NONE
SH07_RS06290 NONE
SH07_RS06295 NONE
SH07_RS06300 1291392 .. 1291406 +  -3.6  -4.38154   TTTTGTTGGTGAAAT               TAATGT TAC GCATTA               TTTTATAACAAATAT  63 192
SH07_RS06320 1295238 .. 1295248 +  -3.2  -4.18197   GAAAGTATTCCTGAA                 CAGG AAC TCTG                 TTTTGCGTGACGCCT  58 5
SH07_RS06325 1296164 .. 1296181 + -12.7  -5.40474   TAATGTCTGTCGCAT             CCCGCTC TGCG GAGCGGG              TTTTTTTGACAAAAT 100 38
SH07_RS06330 NONE
SH07_RS06335 NONE
SH07_RS06340 1299873 .. 1299886 +  -2.5  -5.67711   AAGATGTTGCTTCAG               TATTA AAAA TAATA                TTTTTATTTTATTTG  84 109
SH07_RS06345 NONE
SH07_RS06350 1302848 .. 1302868 + -10.4  -3.36671   ATCTGGCCCCTGCAA            TGCCCGTC CTTGC GGCGGGCA            TTCTCCGGTTAAGGT  78 40
SH07_RS06355 NONE
SH07_RS06360 1305402 .. 1305433 + -11.6  -2.93723   TATCGCATAAGAGTG      CAGTACTCATGCCG GATG CGGCATGAGTACCA       TATCCTTCCTGAAAA  83 69
SH07_RS06380 1310649 .. 1310662 +  -3.1  -3.60098   AATAAAAAACTGGCT               CGTTT ATTA GAACG                TTTGCAATAAGGGGT  51 2
SH07_RS06385 NONE
SH07_RS06390 NONE
SH07_RS06395 1313688 .. 1313702 +  -7.1  -3.30124   ATTTGTGCCTGATGC               GACGC TTGAC GCGTC               TTATCAGGCCTACAA  64 56
        cysS 1318333 .. 1318356 + -16.8  -3.46602   GTAATTGCGCTATTG          CCGGATGCGA GTTT TCGCATCCGG           TTATCGTCTGCGCCA 100 37
SH07_RS06440 1321080 .. 1321099 +  -5.1  -2.75498   ATGAGATATGAATAA            TCAAAAC CACGTT GTTTTGA             ATTATATATCACGTC  50 26
SH07_RS06445 NONE
SH07_RS06450 1324644 .. 1324657 +  -3.9  -3.63515   AAATTATCAATAAGA               TAATC TGCA GATTA                TTATTGGCGATGGCA  53 44
        fimH NONE
SH07_RS06460 1326583 .. 1326597 +  -2.1  -4.08216   CTTTCACTGTGCTCT               GGATT TGTTT GATCC               TTTTCAGGAAGGTAA  56 438
SH07_RS06470 1327551 .. 1327572 +  -7.2  -4.13341   ACAGGCGGTATCGTT           CAGCGCCA CACCAA TGGCGCGG            TTTGATTTGCTCTCT  70 452
SH07_RS06485 NONE
SH07_RS06490 NONE
SH07_RS06495 NONE
SH07_RS06500 NONE
SH07_RS06505 1330608 .. 1330633 +  -4.7   -2.8547   CAAACTGTAGTACAA         TTCTCTCCAGT TTGA ACAGGAAAGAA          TATGCTATGAACCCT  49 61
SH07_RS06510 1331003 .. 1331028 + -10.5  -3.41907   AACGACTAAAATATG         GAGGCTCTTAT ATTT ATATGAGCCTC          GTTTTATGCTTTTTG  80 56
SH07_RS06515 NONE
SH07_RS06520 1332849 .. 1332862 +  -2.3  -4.39426   TAATTACTTTGTTTG               CTCCC ACAA GCGAG                TTTTGTACGGCTGTA  58 121
SH07_RS06525 NONE
SH07_RS06530 1334641 .. 1334669 + -11.8  -3.32844   ACACGGCATAATTAT        GTCACCGGAG CCTGAACAA CTCCGGTGAC        TTCTGCGCTAAACGG  89 90
SH07_RS06535 NONE
SH07_RS06540 1335394 .. 1335415 +  -2.9  -2.71712   AATGGTTGCGACTGG           CAGCAAGGA GGAG TCATGGCTG            ATTTGAGAAAAGCAG  41 3
SH07_RS06545 NONE
SH07_RS06550 NONE
SH07_RS06555 NONE
SH07_RS06560 1336803 .. 1336838 + -14.2  -4.77036   CTTGAGGGAGCCACT    TATATGTTG-GGGAGGC AAC GCCTCCCGCAACATATC    TTTTTCGTAATCAGA 100 164
SH07_RS06565 1337225 .. 1337238 +  -3.7  -3.93664   GGGTGCTCCACCCTG               GCCCG GATG CTGGC                TTTCATGTATTCGAT  58 226
SH07_RS06580 NONE
SH07_RS06585 NONE
SH07_RS06590 1341304 .. 1341314 +  -2.6  -4.31293   TGAGTTGAAATTTCA                 TATT GTT AATA                 TTTATTAATGTATGC  59 436
SH07_RS06610 1342786 .. 1342798 +  -4.1  -4.31164   GAGGTTGCCCCGTAT                TCAGT GTC GCTGA                TTTGTATTGTCTGAA  63 400
SH07_RS06620 1343077 .. 1343135 + -16.3  -4.06182   AAAATACCCCCTGAA AAGAAAGGAAACGACAGGTGCTGAAAG CGAGC TTTTTGGCCTCTGTCGTTTCCTTTCTC TGTTTTTGTCCGTGG 100 83
SH07_RS06625 NONE
SH07_RS06630 1344437 .. 1344469 + -11.4  -3.16564   ATCATTGGGATTATG     CCGCAGCACG-TCTT AAGC AAGAACATGCTGCGG      TTGGATGCTATTTTT  84 40
SH07_RS06640 1345533 .. 1345549 +  -5.2  -2.99268   TTGTTTGATGTTATG              CTTTTG CGCCC CAAAAG              GTTGTTTAGATGTAT  52 98
SH07_RS06645 1346959 .. 1346989 + -11.8  -4.43309   TTGAAATGGCTAGTT       ATTCCCCGGGGCGA TTT TCACCTCGGGGAAA       TTTTAGTTGGCGTTC 100 229
SH07_RS06690 1359352 .. 1359385 +  -3.7  -3.10905   CGTCTGCGTTCGCTC     ACCCCAGTCACTTAC TTAT GTAAGCTCCTGGGGA      TTCACTCGCTTGTCG  48 79
SH07_RS06695 NONE
SH07_RS06700 NONE
SH07_RS06705 NONE
SH07_RS06710 1365705 .. 1365731 + -16.7  -5.65513   GTCAACCATCCGAAA         CCGCTCTCATC CATTC GATGAGAGCGG         TTTTTTTAATTACTG 100 70
SH07_RS06740 1370094 .. 1370135 +  -8.2  -3.65046   ATTTCTATCAACCCT GGGGCTGCCACTCCAAA CCCGAACAA TTTGGA-TGGTAGTCCC TTCTTCGCATGGAGG  73 250
SH07_RS06745 1370333 .. 1370354 +  -4.4  -3.52073   TGTGCGGGGAGTAAT           CCCATAAG CGCTAA CTTAAGGG            TTGTGGTATTACGCC  52 45
SH07_RS06750 1371526 .. 1371552 +    -8  -3.14683   GGAGAATAACAAAAA         TGGTCATCTGGA GCT TACAGGTGGCCA         TTCGTGGGACAGTAT  63 49
SH07_RS06765 NONE
SH07_RS06770 NONE
        entF 1380382 .. 1380408 +  -8.2  -5.85425   AATATTATTTATAAA         CCCATAATTA CAGAAAA TAATTATGGG         TTTTTTATTTGTTTG 100 44
SH07_RS06780 1381705 .. 1381715 +    -4  -3.66356   TGATGGCAGACCACT                 TAGT TTA ACTA                 TTTGCGGTTGAAGGT  54 18
SH07_RS06800 1386193 .. 1386222 +  -8.7  -2.87132   CCAGCATCTGCCCTT       GTGCTGAT-TCTGG CGT CCAGAGATTGGCAC       TGTGTGCAGCGGCAG  61 343
SH07_RS06810 NONE
        entE NONE
SH07_RS06820 NONE
SH07_RS06825 NONE
SH07_RS06830 NONE
SH07_RS06835 1394443 .. 1394475 +  -9.8  -3.34715   TTGATAGCATTTGTA     G-GCCGGATAAGGCG TTCA CGCCGCATCCGGCAC      TCTTTCAGCAACATG  76 144
SH07_RS06840 1394979 .. 1394997 +  -6.6  -3.53012   TAGGCGACTTTGGTG             CCGTGGAG AAA CTTCTCGG             TTTGCGGCAGCACGG  61 300
SH07_RS06850 1397099 .. 1397133 +  -7.2  -3.90112   CCAGGCGCGGGAATA     TTGACGGTCGGCAA ACAACTC TTGCAGGCCGTTAA     TTTGCTTCAGGCGCA  68 53
SH07_RS06875 1401971 .. 1401990 + -13.6  -4.63218   AATTCACCTAATTCT            TCGGGTGC TGCG GCACCCGA             TTTTCTTCCCCGCAC 100 163
SH07_RS06880 1403674 .. 1403697 + -13.1  -5.27923   ACCTGCAATTGCTTA          GCCGCCGGG GTCAAA CCTGGCGGC           TTTTTTATGGCATTA 100 56
SH07_RS06890 1405856 .. 1405867 +  -5.8  -3.31263   CATCCTCTGGGCAAA                GCGA GTTA TCGC                 TTGTGCAGATGGGAT  57 230
        dpiB NONE
        dpiA 1416877 .. 1416899 + -13.4   -2.6955   GGGTGACATGATAAA           GCCGGAGGAA ACT TGCCTCCGGC           ATTACTATTTACTTG  93 35
        pagP 1419575 .. 1419591 +  -7.3  -4.02302   GGTGTACTGGTAACC              GACACAG CAT TTGTGTC              TATTTTTCATGTAAA  72 158
SH07_RS06965 1419850 .. 1419866 +  -9.4   -5.9663   AGCAAGAATTCAAAA              CCCGCT TAATC AGCGGG              TTTTTTTTGGTCTTT 100 49
SH07_RS06975 1421121 .. 1421134 +  -6.7  -3.91801   TAAACAACCGTCGCT               TTGCG CCGC CGCAA                TTATTATGATGTTTT  69 3
        tatE 1421522 .. 1421539 + -11.3  -5.24129   GTTCGATACAAAAAA             CCCGCTT CAAA AAGCGGG              TTTTTTATCAGACAG 100 72
SH07_RS06995 1424225 .. 1424246 +  -5.1    -3.494   CAACATAGACACCTG           GCGCGTC AGCCCGAG GATGCGC            TTCTATACCCAGTTC  56 340
SH07_RS07065 1437978 .. 1437996 +   -11  -3.30039   GATACAGGTCGAGAG             CCTGTCGG AGA TCGACAGG             TCTTCCTTCTCCGTA  76 178
SH07_RS07075 NONE
SH07_RS07080 1441379 .. 1441395 +  -4.4  -3.61178   GCTTTACGGGTGTCG              GGTTTG ACCCC CAGACC              TTTGAGGTAGATCCA  55 237
SH07_RS07090 NONE
SH07_RS07095 1444003 .. 1444046 + -18.8  -3.91144   ACGATGTGTTTTTTG CGCCGATGCCGGATGCAGCG TTTA CGCCGCATCCGGCAGCCGTG TTTATGGGATCTCAA 100 40
        ubiF 1458729 .. 1458744 + -10.4  -5.22312   GCAGAAAAGCAAAAA              GCTCGC CGAA GCGAGC               TTTTTTAATGTGGCT 100 153
SH07_RS07225 1468266 .. 1468288 +   -12  -6.15828   ATCCAACAATGACAA           GCGGTGGAGA TCT TCTCTGCCGC           TTTTTTTTTCATCAA 100 76
SH07_RS07230 1470283 .. 1470299 + -10.8   -5.4588   GCAAACAATCCAAAA              CGCCGC GTTCA GCGGCG              TTTTTTCTGCTTTTC 100 226
        chiP 1472070 .. 1472099 +  -7.8  -3.59627   CCATCTTCTGATGCC       CGACGCGGCAGGT TTTGT GCCTGCCGCA-CG       TTTGAGGAATTTGCT  70 30
SH07_RS07240 1472488 .. 1472505 + -11.3   -4.5442   CCCTTGCATAAAAAA             GCCAACC CGCA GGTTGGC              TTTTCTCGTTCAGGC 100 72
SH07_RS07255 1473493 .. 1473509 +  -6.5  -2.78495   TGGTGCCCAATGCGT              CGCAGAA ATA TTCGGCG              TAATCTTCCTGGTCA  51 248
SH07_RS07275 NONE
SH07_RS07280 1477542 .. 1477561 + -11.4   -5.1287   CATTTAATAAAAAAA            GGGCGGTC GCAA GATCGCCC             TTTTTTACGTATGAC 100 44
SH07_RS07285 1478280 .. 1478294 +  -2.8  -3.80862   ACATGTCTTATTGCG               TGAATG TTT CTTTCA               TTTGATACTGCATTT  52 74
SH07_RS07310 1483323 .. 1483342 +  -6.4  -3.95584   TGTTTAAGATAAAAA            GCCGTATT TATT ATTACGGC             TTTAATTAATAAAAG  67 183
SH07_RS07345 1491692 .. 1491713 + -17.3  -5.36441   TGAATACATTGAAAA           CCGCCAGCG GAAA CGCTGGCGG            TTTTTTGTATCAGGA 100 52
SH07_RS07350 1496085 .. 1496096 +  -4.4  -2.80622   TTATTAGATTTGTAT                TCAC CGGA GTGA                 TGTAATGAAATATAT  46 9
SH07_RS07355 NONE
SH07_RS07360 NONE
SH07_RS07365 1498713 .. 1498727 +  -2.1  -3.37796   TACTTATTGTCTAAA               GCTGT TTTTC ATAGC               TTATACATGATCAAA  45 194
SH07_RS07370 1499093 .. 1499107 +  -2.1  -3.37796   TCCTTATTACCTAAA               GCTGT TTTTC ATAGC               TTATACATGATCAAA  45 94
SH07_RS07375 NONE
SH07_RS07380 1501246 .. 1501261 +  -4.7  -3.17392   GCTTTCGTAAATTTG              TCCTG CTACAA CAGGA               TTAACTTCACAAATA  51 93
SH07_RS07385 NONE
SH07_RS07390 1503409 .. 1503424 +    -6  -4.02132   GGCCTATTAAGACTC              CAGCGC CAGC GCGCGG               TTTCTGAATTTCAGC  66 184
SH07_RS07400 1505918 .. 1505930 +  -2.6  -2.94076   TCAGAGGGATCGAAA                GTGC AACGA GCGC                GTTGTTATCTGATAG  43 48
SH07_RS07405 NONE
SH07_RS07410 NONE
SH07_RS07415 NONE
SH07_RS07420 NONE
SH07_RS07455 1517102 .. 1517112 +  -5.4  -4.32436   CTTCATAACTTTTAC                 GCAT TAT ATGC                 TTTTCCTGGTAATGT  68 162
        sdhC 1517869 .. 1517882 +  -3.1  -2.78384   CGTGCTTTCACTTCT               CGCAGG AGT CCT-CG               TATGGTAAGCAACGC  43 4
        sdhD NONE
        sdhA NONE
        sdhB 1520749 .. 1520795 + -10.7  -2.57931   TAGGCCTGATAAGAC GCGCAAGCGTCGCATCAGGCA ACCAG TGCCGGATGCGGCGTGAACGC CTTATCCGGCCTACA  76 45
SH07_RS07480 NONE
SH07_RS07485 NONE
SH07_RS07490 1525136 .. 1525149 +  -8.1  -3.30124   ATTGAAGCCTGATGC               GACGC TGAC GCGTC                TTATCAGGCCTACGG  66 98
        sucC NONE
SH07_RS07500 1527449 .. 1527466 + -11.3  -5.39755   GGTTTCGACATGGTT             GGCCATC GTAT GATGGCC              TTTTTTGTGCTTATC 100 101
SH07_RS07510 NONE
SH07_RS07515 NONE
SH07_RS07520 1533174 .. 1533190 +  -5.3  -2.55213   TAACCCTGGGTGAGT              TAATTAT AAT ATAATTA              TAAGTTAACTAAATG  49 12
SH07_RS07525 NONE
SH07_RS07530 NONE
SH07_RS07535 NONE
SH07_RS07540 1536947 .. 1536972 +  -7.6  -4.63184   AATTCTCTTTAAAAA         ATTATGGGCC GCTCCA GGCCCATAAA          TTTTTACGCTCCCTT  86 46
SH07_RS07545 NONE
SH07_RS07550 NONE
SH07_RS07555 NONE
        tolA 1539969 .. 1539982 +  -2.3  -2.70544   GGTCAACATCAGGCA               CCGGT TGCC ACGGG                GTTCTGGTAGTTTTG  40 63
        tolB NONE
SH07_RS07570 1541918 .. 1541929 +  -2.2  -2.52896   GGTTTACTAAGAGAA                TTGC ATGA GCAG                 TAACTTCAGACATCA  39 31
SH07_RS07575 1542725 .. 1542752 + -10.7  -2.79302   GTAATGCATAACACA        CGACCAGAAGT CGCATT ATTTCTGGTCG         TGTCGTGCGAATCAT  77 37
SH07_RS07580 1543054 .. 1543066 +  -6.3  -3.46602   CTGCACGACCCACCA                CTAAC ATA GTTAG                TTGTAGTATCCAGCG  61 126
SH07_RS07585 1543159 .. 1543172 +  -2.3  -3.10409   CGATCCCGTCATCAC               CCACC ACCG GGTCG                TTAGCTCAGTTGGTA  43 20
SH07_RS07590 1543334 .. 1543354 +  -5.4  -3.06302   AGTCATCCTGCACGA            CCCACC ACTAATGAC GGTGGG            TTCGGTGGAAGTAGT  52 117
SH07_RS07595 NONE
SH07_RS07600 1543679 .. 1543703 +  -3.6  -2.56596   AGTAAAAATCTTTCA         GGTAAC-ACCC GTAT GGGTCGTTAGC          TCAGTTGGTAGAGCA  44 158
SH07_RS07605 1543763 .. 1543780 +  -4.1  -3.21099   CGAATCCTGCACGAC             CCACC AATTTAAA GGTGG              TTACTGGTAGAGAAC  49 20
SH07_RS07610 1543979 .. 1544009 + -14.9  -2.90212   GCACGACCCACCAAT       GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC       TATCTGCGATACTCA 100 28
SH07_RS07615 1545464 .. 1545477 +  -6.7  -3.53224   ATAACGAATAATAAG               GCGTA ACGT TACGC                TTTGGGGGAAAGATG  63 37
SH07_RS07620 1546301 .. 1546326 +  -2.5  -3.13299   GAATGGTGGCGTGCT         CAATCTGATAG TGAT CCATCAGGTAG          TGTTGGATCTGATCC  43 117
SH07_RS07640 1549122 .. 1549142 +  -8.3    -4.208   GTTAGCAACAAAAAA            GCCGACT CACTTGC AGTCGGC            TTTCTCATTTTAAAC  79 138
SH07_RS07680 1557256 .. 1557273 +  -8.4  -5.35224   CATTGATTCCCTGAA             TGCCCG CTTAGT CGGGCA              TTTTCTTTTTCTCAA 100 35
        modA NONE
        modB NONE
        modC 1560293 .. 1560313 +  -4.6  -3.53012   GGGCGAACTTCCATA            CGGCGTTA ACTTG TTGCGCCG            TTTCAGCCAGAGAAG  53 382
SH07_RS07705 1561918 .. 1561941 + -15.3  -3.10053   TAACCGCTGATTTAC          CCGGCGCAG TCTCTC CTGCGCCGG           TGTATTAACCTATCT 100 38
SH07_RS07715 NONE
SH07_RS07720 1565788 .. 1565811 + -13.2  -2.89055   TCCATTTATTATCTT          TCTGCGCACT TCAC GGTGCGCAGA           TATCTGGAGCATTTG  91 169
SH07_RS07725 1568110 .. 1568138 + -11.8  -2.73468   CCATGTGAATGTAGG        TCGCATTCGGCA CTTAT TGTCGGATGCGA        TGCTTGCGCATCTTA  83 47
SH07_RS07745 NONE
SH07_RS07750 NONE
SH07_RS07755 NONE
        bioD 1575663 .. 1575678 +  -3.2  -4.52589   TTGCTTTGGGGATAA              C-CCGGT AAG GCCGGAG              TTTTATCTCGCCACA  63 417
SH07_RS07765 1577962 .. 1578019 + -15.5  -3.12482   GCAATATATTGAATT TGCGCGGTTTGTAGGCCGGATAAGGCG TTCA CGCCGCATCCGGCATAAACAACGCGCA CTTTGTCTTCAATAG 100 116
        moaA NONE
SH07_RS07785 NONE
        moaC NONE
        moaD NONE
        moaE 1582080 .. 1582110 +  -3.8  -3.55761   CTGGTAGTTTTTTGT       TAGCCGGATAAGGC ACC GCTGCGTCCGGCAA       TTTCACCGCTCAGTA  51 34
SH07_RS07805 1582932 .. 1582950 +  -8.1  -5.84381   TTTTCACCATCACTA             TCCCGGC CATGT GTCGGGA             TTTTTTTCTTACTAA 100 45
SH07_RS07810 1584225 .. 1584235 +  -2.4  -4.25074   CGAATTTCCATGAAG                 GCAG CAC CAGC                 TTTTGCCCTTTGATG  58 420
SH07_RS07830 1587756 .. 1587766 +  -8.2  -3.57263   GTGGCGACAATTAAC                 GCCG GTA CGGC                 TTTGCCGATGAAGAT  69 417
SH07_RS07860 1594681 .. 1594710 + -13.5  -2.71712   TGCATGCTTTTGTAG       GCCGGATAAGGCG TTTA CGCCGCATCCGGC        ATTTCACAACAAGCA  93 146
        dinG 1597527 .. 1597540 +  -9.5  -3.25223   AAAACGAAATCCCCA               CGCCG TCGG CGGCG                TTAATGATGTGAGTC  74 8
SH07_RS07875 1598546 .. 1598569 + -12.5  -4.07568   TTAATTCTTTTCTCA          GCCGGATGA GCCATG TCATCCGGC           TTTTACCCCACCGCA 100 37
SH07_RS07880 1599925 .. 1599971 + -15.1  -2.62463   TAGGCCTGATAAGAC GCGGTAGCGTCGCATCAGGCA TCTGT TGCCGGATGCGGCGTAAACGC CTTATCCGTCCTACG 100 190
SH07_RS07910 1605826 .. 1605837 +  -4.4  -4.32201   CCAATAATCAGCCCG                CGAA TTTC TTCG                 TTTTCCATTAATTCC  67 269
        ompX 1613305 .. 1613334 + -10.1  -4.70879   TCACTTTGGTGATAT       AAAAAATCCGCCT CTCG GGGCGGATTTTTG        TTTTTAAGGTTTCGG 100 41
SH07_RS07965 NONE
SH07_RS07970 1617108 .. 1617126 +   -11  -4.59424   CTGGCAAATAAAAAA             GGCGGATT ATG AGTCCGCC             TTTTGCTTTAAGTTT 100 44
SH07_RS07980 1620223 .. 1620233 +  -8.2  -4.62069   CGCGGGAAGTCGCCC                 GGCG ATG CGCC                 TTTTTCCAGTGCGGC  88 369
SH07_RS08005 1626661 .. 1626681 + -11.1  -3.30124   TCATAAATTGCTGAT            GACGTGGCG GAG TGCCGCGTC            TTATCAGGCCTGGAG  81 58
SH07_RS08020 NONE
SH07_RS08025 NONE
SH07_RS08030 NONE
SH07_RS08035 NONE
SH07_RS08040 1635173 .. 1635185 +  -3.4  -2.58398   CCTCACAGGAAATTA                TTGC CCTAA GCAA                GTGTTGTAACTTTCT  42 73
SH07_RS08045 NONE
SH07_RS08050 1639000 .. 1639025 + -13.3  -2.60244   TAATCATTATTCGCA         GGCCGGACAAA TGAT TTTGCCCGGCC          TGAATTAATTAAACC  93 38
        bssR 1640963 .. 1640983 + -12.6  -3.48703   AGGCCTGAAAACTAA            GGGGGAGA AAGCG TCTCCCCC            TTCATGTTTAAGTTT 100 33
SH07_RS08065 1642536 .. 1642557 +  -2.9   -3.3581   GCTTCCGCACGACGT           GCCGGTG AGTCGATC CACAGGC            GTTTTTGCCCGTACT  47 380
SH07_RS08075 1644265 .. 1644289 + -13.6  -3.39862   TTAATCTTCTGATAA          CCGGATGGCG CGAAA CGTCATCCGG          TTATACGTCATTAAT 100 37
SH07_RS08090 1647235 .. 1647261 +  -8.7  -3.37464   CGAAGGGTAAAAAAA         TGCCTGACTGC TTTGT GCGATCAGGCA         TTCTCGAATTAATGG  71 31
SH07_RS08110 1650401 .. 1650419 +  -7.4  -3.29043   ATTAAGACTGATGCC             CTGCGGAA AAG TTCTGCGG             TTGTGCAAAAAAATT  64 143
SH07_RS08120 1652792 .. 1652808 +  -9.4  -3.29511   GAAAAAATCAGTAAA              GCCCTC AACGC GAGGGC              TTGTCAGACGATCAG  74 27
SH07_RS08130 NONE
SH07_RS08135 NONE
SH07_RS08140 1655175 .. 1655186 +  -3.6  -2.78216   TACGACAGAATATTG                CCTG AAAA CGGG                 TGGTTAGTCGCAATC  45 7
SH07_RS08145 1655765 .. 1655808 + -11.8  -3.65046   TCCACTGATAACTCC TTTCG-AGCACGCAGTCGCTG GTG CAGTGGCTGCGCGCTGCAAAA TTATCTGCTGTTTTT  93 33
SH07_RS08150 NONE
SH07_RS08155 1657278 .. 1657294 +    -3  -3.05384   CAATTCGCACCATTA             TG-GTGC GCTT GCACACA              TTCAATGCCGGAGAG  44 83
        potG NONE
SH07_RS08165 NONE
SH07_RS08170 1660283 .. 1660307 + -12.2  -4.25104   GCCAACCTGGCTACA          TAATGCCGCG CATGT CGCGGCATTG          TTTTCATGGAAGACG 100 55
SH07_RS08175 NONE
        rumB 1662144 .. 1662157 +  -9.5  -3.98172   TGTCATCAGTCTCAA               GCCGC GGTT GCGGC                TTTCTGAATCTTACT  83 200
SH07_RS08215 NONE
SH07_RS08220 1668200 .. 1668228 +    -8  -4.30978   TCAAAATTCAACTTG        GAGACGCCGTAG TGGGT CAGCGGCGGCTC        TTTTGCTGACTTGCG  78 158
SH07_RS08270 1680477 .. 1680526 +  -6.6  -5.14965   AACATCGTGGCCATT TGTGGCTGAATAGCGTCGAGCATCT CAT AGC-GC-CGACGGTATTCAGCC-CG TTTTTTACTGGCGAT  88 47
SH07_RS08280 NONE
SH07_RS08285 1684633 .. 1684653 + -12.6  -4.35926   TTTTTGAGATAAAAA            TGCCAGCC GATCG GGCTGGCA            TTTTGCCTTTAGGAT 100 41
        clpS NONE
        clpA 1687890 .. 1687917 +   -15  -5.38054   AGGTAGGTTGGTCAA        GTCCGTAATCTC GAAA GAGGTTACGGAC         TTTTTGTTTATGGGG 100 51
SH07_RS08335 1695470 .. 1695499 + -13.7  -2.75577   TGTTAATCCATACAG       CAACAGTACTGGG GTAA CCTGGTACTGTTG        TCCGTTTTAGCATCG  93 82
SH07_RS08340 1699550 .. 1699585 +  -9.6  -2.89564   TAACTAATGCATCGT    ATGCCGGATAAGGCGC GGTA GCGTCGCATCCGGCAC     TCTATCAACTGAAAA  70 38
        lolA 1700315 .. 1700336 +  -2.3  -3.37634   GTAAGTAGAGGCACC           TGAGTGAGCA ATC TG-TCGCTCG           ATTTTTCGGATAATA  45 33
SH07_RS08350 1701664 .. 1701678 +    -5  -3.48053   ACGCTACCGTTAATG               TTATCG TTG CGGTAA               TGTTGTTACTGTATC  55 28
SH07_RS08355 1703070 .. 1703083 +  -9.5  -5.72616   TTCTGAATCTAAAAA               GCGCC TGCG GGCGC                TTTTTTTGTCTCCCT 100 51
SH07_RS08360 NONE
SH07_RS08365 NONE
SH07_RS08370 1707230 .. 1707247 + -10.5  -4.14927   AGCTAATCATAACAA             CCGGGGT TTCG GCCCCGG              TTCTCTTTTATTTCT  91 35
SH07_RS08380 1709354 .. 1709385 + -13.2  -5.82036   TGTAAATGAATTCAA      GCAGAGTGTGAA CTTACTGT TTCACACTCTGC       TTTTTTGTTTCTTCT 100 36
SH07_RS08385 1711142 .. 1711166 +    -8  -3.14344   CACATTCTAAACGAC         CAGTATCAAGG TACT CCTTGAT-CTG          TTCATAGAGCAGATA  61 184
SH07_RS08395 1712628 .. 1712651 + -12.5  -3.53761   GCGCGGAATAAAAAA          GCGGCAACT CAATAA AGTTGCCGC           TTTACGGGGAAATTA 100 71
SH07_RS08420 1719920 .. 1719947 +  -4.8  -3.14132   AGGAATAATGTATTA        CCTGTGGTCG CAATCGAT TGACCGCGGG         TTAATAGCAACGCAA  51 167
SH07_RS08425 1721085 .. 1721105 + -12.6   -5.4659   GAAATTTTGCTTAAT            CCCCACAG CCAGC CTGTGGGG            TTTTTATTTCTGTTG 100 45
SH07_RS08430 1722463 .. 1722481 +  -8.8  -5.75945   CTTTCTTTATCAAAA             CGTCGGCA CAT TGTCGGCG             TTTTTTTTCGGACCT 100 69
SH07_RS08435 1723468 .. 1723488 +  -8.9  -3.66784   AACGATTTGTGGCGT            CGGCGCGTA TAA TGCGCGCGG            TTATGTTAACGGTAC  75 141
         cmk 1724229 .. 1724253 +  -4.9  -3.06696   CGAATTTGCAGTACC          CCCGTTGCAAT GGA ATGACAGCGGG          TATGTTAAACAACCC  50 46
        rpsA 1726078 .. 1726095 + -14.1  -3.18264   GTAATCAAGCACTAA             GGGCGGC TACG GCCGCCC              TTAATCAATGCAGCA 100 111
        ihfB 1726460 .. 1726488 + -13.3   -3.0636   CTCAAACTTGAACGA        GAGAAAAGCACCT GTC GGGTGCTTTTTTC        ATTTCTCTAATCTGG 100 49
SH07_RS08455 NONE
SH07_RS08460 NONE
        lpxK 1731680 .. 1731692 +  -4.7  -3.20901   TCTGGCAACTAGTTA                CGCCG CGG CAGCG                TTCGATTGATGGAGT  51 29
SH07_RS08470 NONE
SH07_RS08475 NONE
SH07_RS08480 1733962 .. 1733975 +  -5.3  -4.35675   ATTTTGGGAGGAGTG               TCGTA CCGT TACGA                TTTTCCTCAATTTTT  68 65
SH07_RS08485 1734959 .. 1734975 +  -3.6  -4.09685   AATCACTCTTGCCGT              GGCTCG CCTGA CGAACC              TTTTAGCCACTGCCA  60 15
SH07_RS08495 NONE
SH07_RS08500 NONE
SH07_RS08505 NONE
        mukB 1743117 .. 1743134 + -12.7  -5.26119   GCGAGTTAAAATTAA             GGCGGCA GCAA TGCCGCC              TTTTCTTTTTCCGAA 100 32
SH07_RS08515 1745284 .. 1745300 +  -5.7  -3.13432   GCGATTCTCTGCAGC              CCCCGTC ACT GCTGGGG              TTGAGTCATCTTGAC  55 91
SH07_RS08520 NONE
SH07_RS08525 1746808 .. 1746825 + -12.7  -3.75772   TTGTCATCAGTCTCA             GCCCGCT TTTC AGCGGGC              TTCATTGTTTTTAAT 100 212
SH07_RS08535 1748279 .. 1748293 +  -2.1  -3.25719   ACGCCCAGTTTGTTG               TCAGA ATCGA TCTGG               TTGATGATGTAGTCA  43 102
        pepN 1755563 .. 1755598 + -13.3  -2.77431   CACTGGCTTGATAAA    TAACCGAATGGCGGC AATAGC GCCGCCATTCGGGGA     ATTTACCCCTGTTTT  93 30
SH07_RS08585 1760763 .. 1760784 + -15.9  -2.62118   TTTTATTAATTAGTA           CCCCTCCAG TGTT CTGGAGGGG            ATATTCATATTTTTT 100 57
SH07_RS08590 NONE
SH07_RS08595 NONE
SH07_RS08600 NONE
SH07_RS08605 NONE
SH07_RS08610 NONE
SH07_RS08615 1766990 .. 1767004 +  -2.8  -5.75342   GCCCTGAAACAGGTT               CGGAAA ACG TTTGCG               TTTTTTTTGCCGCAG  86 34
SH07_RS08620 1768124 .. 1768167 + -10.6  -3.22448   CTTCGAATTCCTCTT TATAAGATAATCAGGGCT TTATTTTC AGCCCTGGTTGTTTTATA TTCATCGCTGTTGCT  77 47
SH07_RS08625 1768997 .. 1769013 +  -4.4  -3.90922   GATTTTCTAATTGCT              CCAGCA ACACC TGTTGG              TTATTTCCACGAAAT  60 204
        rlmL NONE
SH07_RS08640 1774275 .. 1774289 +  -2.8  -2.69799   TATCAGGCATGAAAA               CCAACA CTT TGTTAG               TCATCTGTAAAATAG  41 105
SH07_RS08645 NONE
SH07_RS08650 NONE
SH07_RS08655 1777806 .. 1777832 + -10.8  -5.76633   GATTTGTAAATATAA         CCGTCTCCGGTA TGT TGCCTGAGGCGG         TTTTTTTGTCTCTAA 100 48
SH07_RS08660 1778223 .. 1778249 + -15.2  -2.51207   TCTGTCTCTTTAAAA         AGAAACCTCCGC ATT GCGGAGGTTTCG         CCTTTTGATACTCTG 100 42
SH07_RS08675 1781301 .. 1781316 + -11.8  -4.82901   TAAAGGCAAAAAAAA              CCCCGC AGCA GCGGGG               TTTTTCTACCAGACG 100 65
SH07_RS08685 1783034 .. 1783063 +  -3.5  -3.14881   CCGACTCAGTTTTTG       TTGCGGTGTTAAC CAGA GTTGCCAGCGCGA        TTGCTGACCGAGTTG  47 309
SH07_RS08695 1784070 .. 1784083 +  -3.1  -3.11634   TACGCCGAAACAGGA               GTTTC CTGC GGAAC                TTGAGTAATCTGGCG  46 4
        helD 1788971 .. 1788999 +    -6  -3.09327   CTGGATTATGAAGTC       TGCCG-TTGCCAC GTTG GTGGCGACCGGAA        TGTTCCATACCGTCG  53 147
SH07_RS08730 1790688 .. 1790715 + -17.1   -4.1673   TGGCCAAATAAAAAA        TCCCCGGAAGG CAAAAA CCTTCCGGGGA         TTTGTTCAGGGATTA 100 30
SH07_RS08745 1792727 .. 1792758 +    -8  -5.06414   TTAGCCGGACCTTTC      GGAAACAGTCGGTA TAAA TAGCGGCTGTTACC       TTTTTCTTCGCCAAA  91 86
SH07_RS08765 NONE
SH07_RS08770 NONE
SH07_RS08775 NONE
SH07_RS08780 NONE
SH07_RS08785 NONE
SH07_RS08790 1799983 .. 1799996 +  -3.1  -3.57144   GCAATCGGCGAATAC               CTCTG GTCG TAGAG                TTTCAGGATAAAGAG  49 78
SH07_RS08795 NONE
SH07_RS08800 NONE
SH07_RS08805 NONE
SH07_RS08810 1804309 .. 1804345 +  -2.8  -3.95448   AGAACTGTCTAATGC   GTAGACCGGAAAAGGCG TTCA CGCCGCATCCGGCC-AC    TTTCAGTTTTACTCT  54 95
SH07_RS08855 1813314 .. 1813329 +    -4  -3.53091   AACATTTGCCGCTGT              TGGTCCT CGC AGG-CCA              TTTACGCGGCAAAAT  51 485
SH07_RS08865 1814169 .. 1814182 +  -3.1   -2.7263   GCAAATACGCACTGA               CCATGC GCC GC-TGG               ATTTCACAAAATAAT  42 197
SH07_RS08870 NONE
SH07_RS08875 1814569 .. 1814601 +  -7.8  -3.79909   AAATAATGTGATTTT     GT-GAACATCACCCC GTGC GAGGTGATGTTCCGC      TTGTTGCTAATTTAG  72 30
SH07_RS08890 1819959 .. 1819971 +  -4.7   -2.8478   CGTACTACCAGTTCG                CGCAG TTC CAGCG                GTTTGGTGACGTAAT  47 371
SH07_RS08900 NONE
SH07_RS08905 NONE
        torD 1824895 .. 1824925 +   -14  -2.73364   ATGAGCTACAAACCG       GGAAAGCCGCTGGC GCA GCAGGCGGTTTTCC       TGCTTCAGGTGCGCA  95 198
SH07_RS08925 1827760 .. 1827788 + -10.3  -4.61633   GAGGCAGGGGCTAAT        CAGGCATAGTTTG CGT CAAACCTTGCCTG        TTTTTGAAGATGTAT 100 169
SH07_RS08930 1829154 .. 1829184 +  -6.7   -2.7563   GCGGTGAAATAACAG       AAAACTCCCCCGC GAGAA GCGGGGGAGTCGC       TGGTTAAACGTTTTT  57 29
SH07_RS08945 NONE
SH07_RS08950 1830808 .. 1830826 + -13.1  -4.84918   TGTCAACAATCTGCA             CCGCCGG TAACC CCGGCGG             TTTTCTGTTTATGGC 100 255
SH07_RS08990 1837206 .. 1837239 + -10.9  -2.63585   TTCGACCACGTTAAA     GATGCCGGAGGAGGT TGTA ACATCCTCCGGCTAC      CTGTTTAACCTATAG  76 27
SH07_RS09000 1841581 .. 1841607 +  -4.5  -2.62111   TTCCGGTGGCAGATA        TAACGGCAA-GT TTCG ACATTGCCGATA         ATAATTTTTTGGAGA  48 136
SH07_RS09005 1843235 .. 1843260 + -14.7  -2.62515   TGCAGGGAGCGCGCA         GGGGGCGGC CAATCGCC GCCGCCCCC          TGCTGTCCCGGCCTT 100 123
SH07_RS09015 1844520 .. 1844531 +  -4.4  -3.34344   CGTAACAAATACGAC                GCAA ACTC TTGC                 TTAGTTACAACATAC  51 36
SH07_RS09020 NONE
SH07_RS09025 1847015 .. 1847028 +  -8.1   -3.4252   GCAGATGCCTGATGC               GACGC TTGC GCGTC                TTATCATGCCTACAA  68 69
SH07_RS09035 1848395 .. 1848419 + -13.6  -4.33907   AGTGTGTTATCGGTG          CAGAGCCCGG GCGAA CCGGGCTTTG          TTTTGGGTGTTTATG 100 40
SH07_RS09060 1856604 .. 1856614 +  -3.2  -4.24123   GGACACAGGCCTAAG                 CGAG GTT CTTG                 TTTTCAAATTGTTCC  58 71
SH07_RS09075 NONE
SH07_RS09080 1859313 .. 1859332 +  -7.8  -3.58256   ATATACGAAAAAAAA            GCCCGTAC TTTC GTACGAGC             TCTTCTTTAAATATG  70 185
SH07_RS09085 1859675 .. 1859694 +  -7.8  -3.58256   ATATACGAAAAAAAA            GCCCGTAC TTTC GTACGAGC             TCTTCTTTAAATATG  70 177
        ghrA 1861343 .. 1861364 +  -7.3  -3.05384   AATAAAGCATCAGGA           TTCCTGCTA TCCT TGGCGGGAA            TTGAATACAGGAGAG  61 39
SH07_RS09100 NONE
SH07_RS09105 1862725 .. 1862741 +  -3.7  -3.07622   CGTCACTCATAACTG              CAACGGA TAA TTTGTTG              TTGCATAAAATGTGT  48 51
SH07_RS09110 1863326 .. 1863344 +  -7.4   -5.4251   CTTAAACAGTAAAAT             GCCGGA TGATAAT TCCGGC             TTTTTTATCTGTCAG  95 59
        csgB NONE
        csgA 1867430 .. 1867445 + -10.4  -5.75342   TTTGTATTACAGAAA              CAGGGC GCAA GCCCTG               TTTTTTTTCGGGAGA 100 48
        csgC NONE
SH07_RS09155 1868320 .. 1868334 +  -5.7  -2.56181   AGAAGGTGTAAGGAG               GCGTT ATGAA AACGC               GTATTCATGTTGTGC  52 115
SH07_RS09160 NONE
SH07_RS09165 1870262 .. 1870272 +  -3.2  -3.83568   TGGCGTCGATATTGC                 CCGT GGA ATGG                 TTATTGTAAATGTGG  53 6
        mdoG NONE
SH07_RS09190 1876042 .. 1876060 +   -11  -5.40072   ACGAGCCAATAAAAA             TACCGGCG TTA TGCCGGTA             TTTTTTTACGAAAGA 100 156
SH07_RS09195 1876800 .. 1876826 +    -8  -3.06183   GGTATTCGACGACGA         CGTAGACTGTTC CAT GAATAGACTGCG         TTGAATAACACTACG  59 514
SH07_RS09220 1880370 .. 1880396 + -10.9  -2.77005   AACAGAATAAATATC         ATTGCCGGATG CGTGC CATCCGGCAAC         ATTTCACGCTTACTT  77 31
SH07_RS09275 NONE
SH07_RS09280 NONE
SH07_RS09285 1890297 .. 1890313 + -13.7  -4.11692   ATTCGCCTCTTTCAG              CGCCTGC CTT GCAGGCG              TTTTGCCCGTGGGTC 100 88
SH07_RS09290 1891886 .. 1891912 + -14.4  -2.75074   ACGGTGTAACAATGC         ATTCCGGCCTGC AGT GCAGGCCGGAGA         TAATCTTCAGATCGA 100 32
        flgB NONE
        flgC NONE
        flgD 1895072 .. 1895083 +  -2.2  -3.22113   CTTCACATTTCAGGA                GTCA GTCA TGGC                 CTTTTCTCAAGCGGT  43 43
        flgE NONE
        flgF 1897089 .. 1897103 +  -4.2  -2.94633   CATGACAAGTATAAG               TTGCCC GAT GCGCAA               GTTTATCGGGTCTAT  47 52
        flgG 1898024 .. 1898042 +  -8.1  -3.96337   AACTCTAAGGCTTAA             CCGGTGG CAGGT TCACCGG             TTTACTGATTTTTGA  74 33
        flgH NONE
        flgI NONE
        flgJ NONE
        flgK NONE
        flgL 1903533 .. 1903561 +  -8.8  -5.54264   TGGGTATGTTTTGTC        TGCCTGCTCTGG GATCG CTGGGGCGGGCA        TTTTTTTGCCTATTT 100 67
SH07_RS09370 NONE
SH07_RS09375 1908437 .. 1908448 +  -5.8  -2.72144   GATAATGGGCGGTTG                GCCT GATA AGGC                 GTTTACGCCGCATCA  52 58
SH07_RS09385 NONE
        rpmF 1910032 .. 1910077 +  -4.2  -4.07568   ACCGCGGCCGCAAGG TCATCGCTAAG--TAATCACGC ATCT GCGTGATGAAGCTTAGTGAGGA TTTTCCCCAGGCAAC  59 12
SH07_RS09395 1911204 .. 1911221 +  -5.5  -3.57263   TGCGGTAGCAGGACG             CTGCCAG CGAA CTCGCAG              TTTGCAAGTGACGGT  57 33
SH07_RS09400 1912193 .. 1912203 +  -2.4  -2.92267   CGGTGGATTCACCTG                 GGGC TCC GCGC                 TGGTTCGTTTCTAGG  42 1
SH07_RS09405 NONE
        fabG 1913938 .. 1913952 +  -7.8  -2.62642   AAAATGCTCATGTTG               CGCGCA GTC TGCGTG               GTTATGAGTAATAAT  60 54
SH07_RS09415 1914365 .. 1914391 + -13.1  -5.02287   GGCGTAAGTGAACAT        CTCCAGGCGGTC GTTC GACCGCCTG-AG         TTTTATCTTTTTGTC 100 34
SH07_RS09420 1915711 .. 1915726 +  -8.2  -5.52096   TCCACCCTTATAAAA              GGTCCG CTTG CGGGCC               TTTTTTCTTAGCTTT 100 51
SH07_RS09425 NONE
SH07_RS09430 NONE
SH07_RS09435 NONE
SH07_RS09440 NONE
SH07_RS09445 1920081 .. 1920099 +  -4.6  -2.79098   AATCCATCCGTTGAA             TGAGTTTT TTT AAAGCTCG             TAATTAATGGCTAAA  49 27
SH07_RS09450 1921832 .. 1921849 + -12.7  -5.04987   CGTTGGGGAGACTAA             GGCAGCC AGAT GGCTGCC              TTTTTTACAGGTGTT 100 50
SH07_RS09460 NONE
SH07_RS09465 NONE
SH07_RS09470 NONE
        thiK NONE
SH07_RS09480 NONE
SH07_RS09485 1928440 .. 1928453 +  -3.9  -4.34402   TTTCAGCAACAAAAC               TTGAT TAAC ATCAA                TTTTGGTATGACCAA  63 275
SH07_RS09490 1929949 .. 1929965 +  -2.2  -3.48924   GCCCTTGAGGAACAG              CGCG ATCGGCAGC CGCG              TTGTATCAGGCATCC  47 80
SH07_RS09495 1930666 .. 1930692 + -10.1  -5.43866   GTACTCTGCAATTTG         GCCCCTCATTC GCTCA GGCTGAGGGGC         TTTTTTTGCGACTTA 100 48
SH07_RS09505 1931874 .. 1931900 + -18.8  -5.60993   CTACTGCTGATTTTT         TCCCCGCGACAT GCC GTGTCGCGGGGA         TTTTTTTATCCGGGC 100 64
SH07_RS09525 NONE
        lolD 1939823 .. 1939839 +  -5.1  -2.98947   CTGATGGGGGCGGAG              TAATGGC GAT GCCTTTA              TCGTTATTAATTGGC  52 23
SH07_RS09535 NONE
SH07_RS09540 NONE
SH07_RS09545 1943232 .. 1943248 +  -6.5  -4.36063   AACCTAATGTGTTGG              TGCTGCC GGG GGGAGCA              TTTTCATGCTGTTGT  72 393
SH07_RS09585 1949583 .. 1949611 +    -9  -3.06133   GGAAGTAAGCGAAAA       G--GGATGCGGCAT GTG ATGCCGCATCCGGC       TTAAATCCAAACTTA  68 33
SH07_RS09630 1958901 .. 1958925 +   -10  -5.05113   ATGTGTTAAATATTG          AAACGGGCGT ATAAC ACGCCCGTTG          TTTTATTTATGTGGA 100 48
SH07_RS09660 1963335 .. 1963351 +  -2.2  -3.12999   TGAATAATGCAACAG              CCTGAT TATTT AACAGG              TTAGCTATGAAGTCG  43 34
SH07_RS09665 NONE
SH07_RS09670 NONE
SH07_RS09675 1964398 .. 1964439 + -23.3  -2.62616   ATGTCCGCAATATCA GGTGTCAAGAATGGAGAGT TCTC GCTCTCCATTCTTGACGCC  TGATATCCCGCCTAA 100 126
SH07_RS09680 NONE
SH07_RS09685 1966599 .. 1966621 +    -7  -5.03994   TGCGCAAATAGTTGT           CAACCCTGGT GTT ATCACGGTTG           TTTTTATATATCACC  90 122
SH07_RS22865 1969875 .. 1969886 +  -5.8  -2.77899   TTTTAATATTGTAGT                CCTG CGCC CAGG                 TCATTGGTGCGAAAA  51 351
SH07_RS09720 1971224 .. 1971239 + -10.4  -4.54727   CCATCAACGATTAAA              CTGCGC TTCG GCGCAG               TTTTCGTTTACAGGA 100 41
SH07_RS09740 1974346 .. 1974360 + -11.4  -2.56046   CATTAACGTTTATGA               CGGGGA GAG TCCCCG               TCGGTTGACATTTAC  79 102
SH07_RS09750 NONE
SH07_RS09755 1975316 .. 1975346 +  -2.4  -4.34402   ACAAATAACCGATAT       CCGGCGGTGGCA TTATCTT TGTCGGCGCGGG       TTTTCATATCCACGA  58 33
SH07_RS09760 1976043 .. 1976071 +  -8.9  -3.09015   CGCGTTTTGTAATAC        TTTTTGCCGCC TGAAAGC GGCGGCAAAAC        TTGCATCGCTGTGCC  69 29
SH07_RS09765 1976669 .. 1976709 +  -4.1  -2.60615   AGCGCTCTGTCATAA  TGAGAGTTACCCGAT ACCTTATTATC AACAGGTAACTCTCA  ATCTTTAAAAAACGT  45 117
SH07_RS09775 NONE
SH07_RS09780 1979968 .. 1979978 +  -2.4  -3.28712   AGGCGACAAACACTT                 GCGG CAC CCAC                 TTATCCAGCGGCAGC  45 238
SH07_RS09795 1982981 .. 1982996 + -10.4  -5.80727   CGTTTAAAGAGCAAA              CCCCTC AAAC GAGGGG               TTTTTTGTTGTTTTT 100 48
SH07_RS09805 NONE
SH07_RS09810 1987357 .. 1987383 + -10.3  -3.53224   AGCCATTGCCCATGA         TAGTGTCCATT AAAAG GATGGACACTA         TTTCCCCGGAACCTG  80 132
        emtA 1991100 .. 1991114 +  -5.6  -4.58283   CGATGTAAATCAGTC               GCGCAC TTT GTCCGC               TTTTTCCCGGGCTTC  75 33
SH07_RS09835 1992296 .. 1992325 + -12.9  -3.59979   TAAGATTTTCATAAG       GCGGATAGCGATA CAGA TGCCGCTATCCGC        TTTCACATCAGAACG 100 38
SH07_RS09840 1992919 .. 1992976 + -10.6  -2.74563   AAAACCATAGCTATG GTGTTATCTGCCGACAACGCCATCCGG AGAAG CCGAATGACGTTGTCGG-AGTAAGCGC TGGTTAAGGTGTGGG  75 43
SH07_RS09865 2000312 .. 2000323 +  -4.4  -3.54146   CGATTTCTGATACAT                CAGA GTGA TCTG                 TATTTCATTCCGGCG  52 51
SH07_RS09875 2003944 .. 2003961 + -11.3   -4.6709   CGGTGAAATGAAAAA             TCCACGC AATT GCGTGGA              TTTTATATACTTTTG 100 192
SH07_RS09890 2006387 .. 2006416 + -11.5  -2.87963   AAATAATGCAGTTTG       CTGACCAGTCAGT TTGC GCTGACTGGTCAA        TCTCGTACTTATAAA  81 42
        hemA NONE
        prfA NONE
SH07_RS09925 NONE
SH07_RS09930 NONE
SH07_RS09935 2015406 .. 2015422 +    -3  -2.61216   AATAAATAACATCGC              GCATAA ACATA TTGTGC              TGCATTAATTAATCG  42 1
SH07_RS09940 2016642 .. 2016683 + -10.1  -4.78848   CTGGTTCAAGATTAG CCCCCGTTCTGTTGTCAGGT TGT ACCTCTCAAC-GTGCGGGGG TTTTCTCTTTCCAGC 100 347
        chaB 2019124 .. 2019136 +  -3.4  -3.15346   ATCGTAAAACCGGTC                GCTT AGTTA AAGC                TATTCGTGCGGTGTT  46 34
SH07_RS09965 2020426 .. 2020443 +  -4.1  -4.66264   ACTGCTTCTGCAGCG             TCTGACC AATC GGTCACA              TTTTTAAGGATTTTC  68 483
SH07_RS09975 2022017 .. 2022031 +  -2.8  -4.40894   CATTTTCTTCAGCAT               GTGC TTGACGT GCAC               TTTTACTGTGCTTTC  62 98
SH07_RS09990 2024649 .. 2024664 +  -4.8  -3.29324   AAAGTTATCTTATCG              TTTGAT TTAC ATCAAA               TTGCCTTTAGCTACA  53 46
SH07_RS09995 2026261 .. 2026279 + -12.4  -5.64274   ATTTGATTATCCTTT             GCGCGGCA TGA TGTCGCGC             TTTTTTTATGCGTCA 100 172
        narZ NONE
        narH NONE
SH07_RS10010 NONE
        narI 2033314 .. 2033329 +  -8.2  -5.60993   TTTAGTTCACATAGA              CCCTGC TTCG GCGGGG               TTTTTTTATGGGCAC 100 47
SH07_RS10020 2034178 .. 2034194 + -12.3  -3.57797   CCTCACCCTTCGGGC              CGTTGCC TGT GGCAACG              TTCTCTCGCTTTCGC 100 453
SH07_RS10045 2036895 .. 2036910 +  -7.6   -2.7264   GGACGAACTTTTGCC              GTTGGT ACGC ACCAAC               ATTTGACCAGAATTT  60 4
SH07_RS10050 2038138 .. 2038158 +    -4  -2.79796   CCTCCTTTTCAGAAC           TTAGC-CCC TTCG GGGTGCTGA            TATACTGGGATGCGA  46 142
SH07_RS10055 2039158 .. 2039179 + -12.3  -5.66684   GTGTTATCCACGAAA           CGGCGTTGA GCAA TCGACGCCG            TTTTTTTATAGCTTA 100 52
SH07_RS10065 2041249 .. 2041275 +  -9.3  -4.77165   TTTTGATATCTTAAC         CGACCTCGGCC TTGAT GGTCGGGGGCG         TTTTGTTATGAACAC 100 364
SH07_RS10085 2046028 .. 2046045 +  -8.4  -3.98113   TCCTTTCAAATGAAA             CGGAGC TGCCAT GCTCCG              TTTACTTCGTCATTA  77 42
SH07_RS10090 2048388 .. 2048416 + -15.3  -3.16187   AGCACTAATGGCAAT        ACGTGGGGCAGGA GTG TCCTGCTCCACGG        TGTCTGATTTTTATC 100 33
        oppB NONE
SH07_RS10100 NONE
        oppD NONE
SH07_RS10110 2052345 .. 2052364 + -13.6  -4.59773   CTTTAAAAACAATAA            GGGCTGAC AGTT GTCAGCCC             TTTTTCACGCTAAAA 100 35
SH07_RS10125 2054526 .. 2054564 +  -9.7  -2.50438   GCGATCTACAATATC   TAAATGTACTGGGCACC ATTGC GGTGCCCAATAAGTTTA   CTCTTCCGTCTTTAA  70 23
SH07_RS10140 2057381 .. 2057414 + -16.9  -3.14564   AATTCAGTAAGCAGA     AAGTCAAAAGCCTCC GACC GGAGGCTTTTGACTA      TTACTCAACAGGTAA 100 31
SH07_RS10160 2060623 .. 2060639 +  -2.2  -5.00138   GATCAAGAATAGTTT              CCAGTT GAACA ATCTGG              TTTTTGGTTTCACTA  71 423
SH07_RS10205 NONE
SH07_RS10210 NONE
SH07_RS10215 2072338 .. 2072364 +   -11  -3.01712   CAGACTTTACTATCA         GTGAGTCAGA TGTAAGT TCTGACTCAC         TGTTGCACAAAAGCA  79 155
SH07_RS10220 2073303 .. 2073323 +  -8.3  -4.62872   CGGTTAATCAAAGTA            TGCCGGA CGTCATA TCCGGCA            TTTTTACAGATTAAT  91 34
SH07_RS10240 2075957 .. 2075976 + -10.7  -4.58773   GATGTAAAAGACAAA            CGCGAGG CTAAGA CCTCGCG             TTTTGCTTTAATCAA 100 34
SH07_RS10250 2076471 .. 2076482 +  -4.4  -3.14848   CCAAGACCTGTTAAC                TCAG TCAC CTGA                 ATTTTCGTGAACAGA  49 4
SH07_RS10255 2079244 .. 2079261 + -10.5  -5.49234   GTTTTTATAAACAAA             GGGTCGC GAAA GCGGCCC              TTTTTTATTGCATAT 100 57
        cysB 2080410 .. 2080443 +  -9.7  -3.35613   AATTTCTTGCGTTAT     TTTCGGCACCTTT TATGTAGC GAAGGTGCCGGAA      TATATTCTCTTTTGT  76 39
SH07_RS10265 NONE
SH07_RS10270 2081242 .. 2081257 + -11.8  -3.66643   CTCACTGATCCTTGA              CCCCGC TGCG GCGGGG               TTGTCATTTGCTTTG  93 242
SH07_RS10280 2084080 .. 2084114 + -11.6  -2.52896   TTGAAGTAACAACTA     TTTGCTTGCCGG TTATTTTGCTT CCGGCAAGCAAA     TGAATTACACAATGC  79 32
SH07_RS10290 2085716 .. 2085741 +  -4.1  -2.90813   CAATGCGTGTGGATG         CCATTT-CGC AGACGGC GCGAAAATGG         TACTTTAAAGGGCTA  47 80
SH07_RS10295 2086109 .. 2086123 +  -2.1  -2.81738   GCACTCGTCAGCGGC               GAAGG AATAA CTTTC               TATGCTGGAGTTGTT  41 16
SH07_RS10300 2087277 .. 2087289 +  -2.6  -3.18031   ATTAAACCGATTCGC                GGTC TTGAT GGCC                TGTAATTTTTAAAAA  44 8
SH07_RS10305 NONE
SH07_RS10310 2088560 .. 2088579 + -13.6  -3.71687   CGGTTAACATAAAAA            GCCACGGA TATA TCCGTGGC             TTTCGAATATTTTAC 100 34
SH07_RS10335 2092797 .. 2092808 +  -3.6  -4.32857   CGCTGCGAAACGGGT                GTCG GTCC CGGC                 TTTGTCTTTCAGGAA  65 355
        puuD NONE
SH07_RS10410 2108137 .. 2108150 +  -5.3  -2.70932   GCGAATCCCGATGAG               CTTAC TCAG GTAAG                TGATTCGGGGGAGCG  49 127
SH07_RS10415 NONE
SH07_RS10420 NONE
SH07_RS10425 2112601 .. 2112615 +  -8.6  -4.77438   CCCTTGTTGCAAACT               GAGTTG CAG CAACTC               TTTTTCCTGCTGCAT  93 244
SH07_RS10435 NONE
        pspB NONE
SH07_RS10445 2114936 .. 2114956 +  -3.4  -2.62463   CACGTTACGTAGCCG           TTTCCGTCA ACTG TGA-GGAAA            GTTATGAATACTCGC  42 10
SH07_RS10450 NONE
SH07_RS10455 2115587 .. 2115602 + -11.8  -6.30182   AGAATTCACCATGAG              CGGCGC TTAT GCGCCG               TTTTTTTTTCTGTCA 100 42
SH07_RS10460 NONE
SH07_RS10465 NONE
SH07_RS10470 NONE
SH07_RS10475 2120510 .. 2120522 +  -2.7  -3.10597   GCTAAAGCGGCCAGT                TTCTT TAC AAGGA                GTTTTAAATGAAAAA  44 36
SH07_RS10480 NONE
SH07_RS10485 NONE
SH07_RS10490 NONE
SH07_RS10495 NONE
SH07_RS10500 NONE
SH07_RS10505 NONE
SH07_RS10510 2128566 .. 2128577 +  -2.2  -4.09739   GGCAACGGTAATATT                CTGT GGTG ACGG                 TTTTCCAGAAATTAA  56 172
SH07_RS10520 NONE
SH07_RS10525 2132145 .. 2132164 +    -5  -3.34517   CGAAAAATAATGCAA            TATCGGGT GCTG ACCGGATA             TCTTTACGCCGAAGT  53 31
SH07_RS10530 2133831 .. 2133871 + -12.7  -3.61609   GAACGAAGAGTAAGC  GCGAATATGCCTGATGGTG CAA CACCATCAGGCATATTAAA  TTATGCTTTCAGTAC 100 28
SH07_RS10540 2135737 .. 2135771 +  -8.4  -2.94365   AATGCGGTGTATAAG     CTGGCACAGCGCCTGG GTT TCAGGTTCGGAGCCAG     GTTTGTCACCTGTCA  61 300
SH07_RS10560 2138447 .. 2138460 +  -6.7  -2.80195   GGCTGAAGTATAAAG               GTGCT GTTT AGCAC                TACTTGCTGATACAT  57 15
SH07_RS10565 2138651 .. 2138661 +  -2.6  -3.05561   TTTTGGAGACTATTA                 TTTA CAC TAAA                 TCTGATTTGATATAT  43 5
SH07_RS10570 2140419 .. 2140446 +  -8.4  -2.74525   TTGATGTGATGGGAA        CTGGCGTTACCC TTGT GCATAACGCCAG         TGATGTCTGATTTAG  64 37
SH07_RS10580 2142814 .. 2142825 +    -3  -3.35996   ACCTTCCCTAACTAA                TCAA TGCG TTGA                 TTGTAAATCCAGCTA  47 180
SH07_RS10585 2143200 .. 2143217 + -12.7  -3.47751   AGTAAGTAAAAAATA             GGCCCGA TAAC TCGGGCC              TTGTCAGTTATTGAA 100 36
SH07_RS10625 2151493 .. 2151505 +  -9.1  -2.88069   GGTAATACGTTGTTG                GACCG ACC CGGTC                TGGTTATCATATCGC  67 302
SH07_RS10635 2152594 .. 2152633 +  -3.4  -4.75372   GTAATCCGGTCATCG  CGTCATGGTGAGCAGCATG TTC CA-GCTGCTCCTCCAGCCG  TTTTTGCTCAGTAAT  71 510
        zntB 2154790 .. 2154809 +   -10  -5.85178   ATTGATTCGTACGAC            GCCGACTT TGAT GAGTCGGC             TTTTTTTTGCCTGTT 100 215
SH07_RS10650 NONE
SH07_RS10655 2156509 .. 2156523 +  -7.1  -3.30243   GGGATTGCCGGATGC               GACGC TGGCC GCGTC               TTATCCGGCCTCCAT  64 83
SH07_RS10710 2165219 .. 2165237 +  -7.4  -4.11394   TGCCTAATTGATTGT             CAATAGGC TAT GCCTAATG             TTTTGAGCGTAACCT  73 518
SH07_RS10720 NONE
SH07_RS10725 2166650 .. 2166661 +  -2.2  -2.88366   GGCGGCGGTTCTTCC                GACG ATTC TGTC                 ATTGTTCATTAAGCA  41 2
SH07_RS10730 NONE
SH07_RS10735 NONE
SH07_RS10740 NONE
SH07_RS10745 2169232 .. 2169243 +    -3  -4.00042   TAACTACAATATGAT                TCAT TTTG ATGA                 TTGTTTCATAAGGAA  56 46
SH07_RS10750 2170890 .. 2170920 + -11.9  -4.71426   TACCAGCAACACCTC      CGT-CCCCAGTAGC ACTG GCTGCTGGGGTGCG       TTTTATTCATAAAGC 100 109
SH07_RS10755 NONE
SH07_RS10760 2171542 .. 2171561 +  -4.2  -3.33261   GATACGATAAAAAAG            CCATAGCT GCCC AGCGGTGG             TTATCGGAGTTCGGG  51 20
SH07_RS10765 2171979 .. 2171994 +  -6.8  -5.55769   TTATGTCGCCTGAAA              CCCACT TCGC GGTGGG               TTTTTTGTTGTCAGG  91 149
SH07_RS10770 NONE
SH07_RS10775 2173263 .. 2173278 +  -3.2  -5.03747   GCAAACACATCGAAT              CAGCCT ATTT AGGCTA               TTTTTTCCACCATTT  71 117
SH07_RS10785 2174579 .. 2174598 + -12.1  -5.26316   CACAGTGTTATGACA            GCCCGCC GGTTCA GGCGGGC             TTTTTTGTGGGGTGA 100 53
SH07_RS10800 NONE
SH07_RS10805 2178631 .. 2178643 +  -3.4  -4.78477   GGAAGACGTAAAGCA                TCTC ACACC GAGA                TTATTTTTTATATGT  68 103
SH07_RS10835 2187116 .. 2187161 +  -3.3  -4.88736   AAAGCGGTTACACAT GCTGCCGGAAATCATCATT TTTTCACC AAAGCTGATTTCTGGCGGA TTTTTATCGCTGGTC  74 250
SH07_RS10850 NONE
SH07_RS10855 NONE
SH07_RS10860 2191914 .. 2191940 + -15.3  -3.34192   ATCTGTTTTAACTAA         TTGGCGTTGCA GTACA TGCAACGCCAA         TTAGTTAGCGGAATT 100 166
SH07_RS10870 2194610 .. 2194624 + -11.4  -5.71712   CTCATAAGTAAAAAA               CGGCAC CTG GTGCCG               TTTTTTTGTCTGAAA 100 50
        paaA NONE
        paaB NONE
SH07_RS10895 NONE
SH07_RS10900 NONE
SH07_RS10905 NONE
SH07_RS10910 NONE
SH07_RS10915 NONE
SH07_RS10920 NONE
SH07_RS10925 NONE
SH07_RS10930 NONE
SH07_RS10935 2209003 .. 2209059 +  -5.3  -2.89534   AATATTGTTGGTGCC TGACGTATCG---TCTGGCCCTGGTG GGGTAAAG CGCCAGGGCCAGAAGTCGATACGACC TGTGCTATGATTCAT  50 23
SH07_RS10940 NONE
SH07_RS10945 2210660 .. 2210690 +  -9.3  -4.49906   TTGTCCCTTTAATTA      TAAAGCAGAG-TTA TGTT TAAGCTCTGCTTTA       TTTATTTGAGTATTA  95 57
SH07_RS10950 2213578 .. 2213590 +  -4.1  -3.44051   ACCCAGCGCACTATG                CGGAT GCC ATTCG                TTATAATGCTCGAAC  52 119
SH07_RS10965 NONE
SH07_RS10970 2219603 .. 2219626 + -11.8   -5.7946   CATGTGATCCCTAAA          CCGCAACGCTG ATA CAG-GTTGCGG          TTTTTTTATTGCCGG 100 48
SH07_RS10975 2220662 .. 2220679 +  -5.6  -6.28401   AACGAATATACAAAA             GGGAAA GATGCA TTTCCC              TTTTTTTCTTTTTTA 100 39
SH07_RS10980 NONE
SH07_RS10985 NONE
SH07_RS10990 NONE
SH07_RS10995 NONE
SH07_RS11000 2227837 .. 2227851 +  -3.4  -4.18494   TTATGCAGAAACAAT               GCTGTC GAT GGCTGC               TTTTGCGTCAGACTG  58 94
SH07_RS11010 2232521 .. 2232538 +  -3.4  -3.68351   GGCGATGGAGCAGAT             TAGCGG TTAACC CTGCTA              TTTGCCTGATAAAGA  51 16
SH07_RS11015 NONE
SH07_RS11020 2235374 .. 2235386 +  -6.9  -3.00017   TTCACCAGTTGTAAA                TCGCC CAC GGCGG                TAATTTCCGTTTGCG  56 161
SH07_RS11040 NONE
SH07_RS11045 2237702 .. 2237733 + -11.6  -3.52009   CTAGGTTCATTCGTT      GGCCTCGGTTGATA GAAA TATCGGTCGGGGCC       TTCGTCTTTCTGATT  89 310
SH07_RS11055 2239835 .. 2239864 +  -5.6  -4.07568   TCCCGGAACAGGCAG       GGCCACCAGCGT GGCATG ACGCAGGTCGTC        TTTTACAGCGCCAGA  65 183
SH07_RS11065 2242301 .. 2242313 +  -2.7  -3.74762   TGCATATTCTCTCAG                TTCAA CAA TTGGA                TTATTAATAAATATT  52 128
        mdoD 2244091 .. 2244114 + -14.6  -2.90075   TAATCGTTTTTTCTT          CGGCACCTTC TTCG GGAGGTGCCG           TCTGGTTAAACACGA 100 38
SH07_RS11080 2244453 .. 2244469 + -10.8  -5.02074   TGTAAACTTTCCTAA              GCCGCC AGCCA GGCGGC              TTTTTTAACAACTGC 100 36
SH07_RS11085 2245455 .. 2245467 +  -3.3  -3.05596   TGGCAAAATCAAAAA                CTTCG GCG CGATG                TTCAATAAAAGCATA  43 436
SH07_RS11095 NONE
SH07_RS11100 NONE
SH07_RS11105 2248701 .. 2248720 + -13.6  -4.85599   AAAGTAGTTCCAGAC            GCGCCATC GTTA GATGGCGC             TTTTTATCCGGTGCG 100 34
SH07_RS11110 2249178 .. 2249188 +  -4.6  -5.04249   ACAATGCCTTCCACG                 CCGG ATA TCGG                 TTTCTTTTTTCACAG  81 275
SH07_RS11120 2250800 .. 2250817 +  -4.8  -2.73124   CAACGTTGATCTTTA             TCCGGA TGCGCT TCCGGG              CTTTGGCAAATAGCC  46 393
SH07_RS11130 2252304 .. 2252324 +  -6.1  -4.63527   TTCGCAACGTCGCGC            TTGTGGCTA AAA TAGCCGCCA            TTTTTCAGCTACTGG  77 54
SH07_RS11135 2254803 .. 2254820 +  -7.1  -4.30177   AAATTACACACGGAG             GTAAACA CTAA TGTTTAC              TTTGTTGATATACTC  75 519
SH07_RS11145 2255015 .. 2255025 +  -3.2  -3.15579   GCAATCCTGAAACAA                 CTCG GTT TGAG                 TTAATCGCCAATTAA  46 11
SH07_RS11150 2255508 .. 2255525 +  -2.7  -2.63596   TACAGTTAACGAAAA             GTTGTCA TTTT TAACAAC              TGATATAGACTGCCG  41 42
SH07_RS11155 2256970 .. 2256980 +  -3.2  -3.08036   ACTTATTCAAGAACG                 GCTG TAA TAGC                 GTTTAATTTAATTCC  46 19
SH07_RS11160 NONE
SH07_RS11165 NONE
SH07_RS11170 2260318 .. 2260348 +  -2.6   -3.4331   GTTCGTGAAACGTCT      GG-GAGCGTTC-GA TGCAC TCTGAACGCGCACC      GTTTTTCCTCAAACT  48 4
SH07_RS11175 NONE
SH07_RS11180 2262586 .. 2262610 +  -4.3  -2.62263   GATAATATTGCAGAT          CGTAAGAGTAT GAG ATGATCTTGCG          TACTGTCAGAGCACT  45 42
SH07_RS11185 2262898 .. 2262914 +  -2.2  -2.60992   GAAAAAACTTGATGC              ACGTCA AAAAA TGACGC              ATATTTGCGCGCGTT  40 126
SH07_RS11190 NONE
SH07_RS11195 2263815 .. 2263833 +  -3.1  -2.52623   GGTAGAGGAGGTCTG             GGTGATG CGCAC CATCAGC             GTGTTCTGGACAACC  40 392
SH07_RS11210 2265606 .. 2265624 +  -5.2   -2.7728   ACTTCGGCAAAGTGG             TGATCCGC GTG GCGGGTGA             TGATTAAAGTTTCAA  50 0
SH07_RS11215 2266734 .. 2266747 +  -5.9  -3.76811   GACGAGAGTATAAGA               CGGCG CTTT TGCCG                TATTTTCATCATCTG  63 265
SH07_RS11225 2270017 .. 2270039 + -14.9  -4.19953   GTCAGTAATCTGAAT           TTGCCCGGC ACGTA GCCGGGCAA           TTTTGCAATTAACTC 100 107
SH07_RS11235 NONE
SH07_RS11240 2273206 .. 2273224 +  -5.4  -4.35992   CAAACCATCATTCAT             TTCAATGA TTG TTATTGAA             TTATTTATTGTTGTG  68 512
SH07_RS11245 NONE
SH07_RS11250 2276050 .. 2276079 + -11.7  -3.62354   GGCAGGGCAAGATCA       TGAAAATTGTGAT GTAA ATCACGATTTTCA        TCTTTGCTTTAACGC  90 104
SH07_RS11255 NONE
SH07_RS11260 2278523 .. 2278533 +  -6.8  -3.87104   GGGCTTTCGTAATCT                 TGCC CTG GGCA                 TTATTGTCGTATAAA  67 29
SH07_RS11265 NONE
SH07_RS11275 2280449 .. 2280480 + -16.6  -2.52795   TAATTTATGTCAGGT      TGCCGGATGCGGCG TAAA CGCCTTATCCGGCA       TACATTAGCCCGGTT 100 38
SH07_RS11325 NONE
SH07_RS11330 NONE
SH07_RS11335 NONE
SH07_RS11340 2297578 .. 2297609 + -13.9  -3.21395   TTTTGAACTTTAAGC      TGAAAATGGCGCT GTAAAA GGCGCCATTTTCA       TATTGTAGACAACGT 100 45
SH07_RS11370 2302639 .. 2302666 + -11.3  -3.67558   AGCATTGCCGGATGA        CGCGTCAGGCG CGTGAA TGCCTGATGCG         TTGTTAGCATCTCTA  90 41
SH07_RS11530 NONE
SH07_RS11535 2349608 .. 2349618 +  -6.8  -3.09803   TAAAAAACGGGAGGC                 CGCA TAA TGCG                 TATTCGCTACGGTTG  59 19
SH07_RS11540 2350599 .. 2350623 +  -2.1  -2.54732   GGGCCAATAACCCAT          TGCCATAAAGG ATA TCTTCATGACA          CTTCATCGCTTTAAG  39 18
SH07_RS11545 NONE
SH07_RS11550 NONE
SH07_RS11555 NONE
SH07_RS11560 2354149 .. 2354162 +  -5.3  -3.07043   CGAAGCCAGTACACG               CTGAA GATC TTCAG                TCTTGAGATAATGAG  53 503
SH07_RS11570 2355090 .. 2355102 +  -3.3  -3.80893   GAAAGTAAGGCGCGC                CGGAA GTG TGCCG                TTTGCCTTCTGCCCT  53 376
SH07_RS11600 2361254 .. 2361266 +  -2.7  -3.68936   AGGGATATCAATGAG                CTATT TTT GATAG                TTCTTGCGGTTAATA  50 27
SH07_RS11605 NONE
SH07_RS11610 2363792 .. 2363805 +  -9.5   -5.1861   ACGCAATAGTTGAAA               GGCCC ATTC GGGCC                TTTTTTAATGGTACG 100 32
SH07_RS11620 NONE
SH07_RS11625 NONE
SH07_RS11630 2365784 .. 2365801 + -12.7  -3.73068   ATGTAGTTTGTTCTG             GCCCCGA CATC TCGGGGC              TTATTAACTTCCCAC 100 35
SH07_RS11640 2368062 .. 2368078 +  -5.7  -4.40298   GATTCGAGCAAGACC              GTGGGGG CAG CCCGCGC              TTTGTTGATTTAAGT  70 1
SH07_RS11645 2368333 .. 2368369 + -10.2  -4.82901   ATAATCCCTCACCTA   ACCGGCCCCTTGTTACA GTTG TGTA-CAAGGGGCCTGA    TTTTTATGACGGCGA 100 50
SH07_RS11660 2370862 .. 2370890 + -13.9  -2.58292   TTACTGCTATAACCA        GGCTGGCCTGG CGATATC TCAGGCCAGCC        ATTGGTGGTGTTTAT  95 29
SH07_RS11670 2373839 .. 2373856 + -10.5   -3.8591   TCAGTAATTTTTATA             CCCGGCG TAAC TGCCGGG              TTATTGCTTGTCACA  86 34
SH07_RS11675 2374614 .. 2374637 + -13.2  -3.63922   AGAGTAATTCATTTC          CTCTCATCCC ATCC GGGGTGAGAG           TCTTTTCCCCCGCCT 100 34
SH07_RS11680 2374992 .. 2375015 + -11.8  -5.26875   ATGAACTAAGCGTGT          G-AATGCCGCC GAT GGCGGCATTGC          TTTTTTACTTCACGG 100 32
SH07_RS11695 2379032 .. 2379042 +  -2.6  -2.77118   CCGAGTTAAAGCCAT                 TTTT CAC AAAA                 TCGATTTTGGGTCTC  42 185
SH07_RS11700 2380035 .. 2380051 +  -6.5  -5.80003   CAATATGCTCACTGG              CTACCTG CAT CAGGTTG              TTTTTTGTTTCTTCC 100 281
SH07_RS11720 NONE
SH07_RS11725 2383131 .. 2383146 +  -4.6  -3.93984   TCAAATATAACAAAA              CCCCGT AAAA ACGAGG               TTTATGGATAAATTT  61 132
SH07_RS11770 2387923 .. 2387954 + -10.2  -5.08601   ATTGCCCCATTTAAA      GCACAAAACCCGCT CATC AGCGGGTTTTCTAC       TTTTTCTTAACGTCG 100 314
SH07_RS11810 2392319 .. 2392337 + -11.7  -4.11216   AGTGACAGCCGTATT             GTGGCCC TCATC GGGCCAC             TTTTCGCCATCAGCC 100 40
SH07_RS11825 2393904 .. 2393926 +  -4.3  -4.09864   AGCGGACAAATAAAA          GATAACATCA TCAA TGA-GTTATC           TTTTACCACATCAAT  61 21
SH07_RS11830 2394302 .. 2394318 +  -2.1  -3.53343   CCGAAGGCGAAGAAG              CTCTCAG CTT CAGTGAG              TTTAAACAGGCGCTT  47 97
SH07_RS11835 2394872 .. 2394889 +  -6.9  -3.36492   CGGGGTTATTCCTTC             CCCGTTG AGGA CACCGGG              TTGTCAGGTTGACCA  59 289
SH07_RS11845 NONE
SH07_RS11850 2395905 .. 2395916 +  -2.2   -4.4017   AAACCGCTGGGATGA                GGAG TCTG CTTC                 TTTTGTCCCGGTTGA  60 378
SH07_RS11860 NONE
SH07_RS11865 2398575 .. 2398587 +  -3.4  -2.94032   GTAATTAATTTTTCT                GGTT TAATT AACC                CTTTACTTAACCAGT  42 325
SH07_RS11885 NONE
SH07_RS11890 2402349 .. 2402364 +  -4.6  -4.36411   TTTTGATGGTGTAAA              CCCGTT CGAC GGCGGG               TTTTACTCCTTCATC  67 63
SH07_RS11900 2403454 .. 2403476 +   -12  -2.74144   ACATTATCGACTGAA           CGCCGGATAT GAC AAATCCGGCG           ATTTGAACATACAAC  83 42
SH07_RS11905 NONE
SH07_RS11910 NONE
SH07_RS11915 NONE
SH07_RS11920 2410038 .. 2410055 + -12.7  -2.76315   CAGGTTAACAAATTG             GTGCGGG GCAA CCCGCAC              ATTTCAGGATGTTAG  89 33
SH07_RS11925 2410664 .. 2410676 +  -9.1  -3.41073   CTGTTAATTCCTGTC                GCGGT TAA ACCGC                TGTTTCGATAGGATC  73 2
SH07_RS11930 2412529 .. 2412542 +  -3.1   -4.4846   ATTGATTGGGCAACT               GT-GCG CCA CGCTAC               TTTCTTCTTCGCTTA  65 416
SH07_RS11950 2416527 .. 2416556 +  -9.4  -3.62597   ACGCCTGAAAAATAA      GTCCGGACTGCGGT AAAT ACC-C-GTCCGGAC       TTATTGCCAGCTCAA  78 33
SH07_RS11955 2417296 .. 2417326 + -11.9  -2.71924   TCGCGCCTGAAAATT       ACGGTGCTAAGCG GGTAA CGTTTAGCACCGC       CTTTAGCGGAGGGTA  83 70
SH07_RS11960 NONE
SH07_RS11965 2418357 .. 2418380 + -15.3  -3.13403   AAAATAATGTTCAAA          CGCTGCCCG ACAGCG CGGGCAGCG           TCTTCATCAGGCAAG 100 34
        tqsA 2420643 .. 2420655 +  -4.1  -3.53811   CACCAGCATAGCCAG                TGTTC ATC GAACG                TTTAAAGACAATCAC  51 154
SH07_RS11995 2424959 .. 2424975 + -10.8  -3.81062   CAGTTACTCCTATAA              GGCGGC TTGAT GCCGCC              TTTCGCATTTTTAGT  88 46
SH07_RS12000 2426496 .. 2426520 +  -5.7  -3.05384   CGGCGACCTGGATGC          TGGTGGGATAA CGT TCATCCCATCG          TTGGATAGCAAAGGA  54 15
SH07_RS12005 2427257 .. 2427270 +  -4.5  -2.92102   GATGGCGGTCGTCAT               CTGCG TTAA TGCAG                CTTTATCCAGCATAT  50 17
SH07_RS12015 NONE
SH07_RS12020 2429806 .. 2429820 +  -3.6  -2.53119   AAAATAAGTATGTTG               TAACTA AAG TGGTTA               ATATTATGGCGCGTT  44 81
SH07_RS12025 2431199 .. 2431214 +  -5.4  -4.11484   TTTCCCCGGCATGAT              TGAGCT GCCC GGCTCA               TTTTCCGGGATTGAG  65 469
SH07_RS12040 2435376 .. 2435396 + -12.6  -4.27483   AGGCTTATAACACCT            TCAGGCGG CCAGT CCGCCTGA            TTTCATTTTATGGAT 100 83
SH07_RS12045 2436941 .. 2436964 +   -11  -4.34402   AATTCACGGCCAAAA          CGCCGGAG AATTTTCA CTCCGGCG           TTTTCATCTGAAAAC 100 39
SH07_RS12080 NONE
SH07_RS12085 2447696 .. 2447737 +  -8.7    -4.652   CCGCGCTGTTCGTTA ACCCCAATTGCGCAACG TAAAAAAT CGTTGCGCAATCGTGGA  TTTTTACCCTGCTTT 100 25
SH07_RS12090 2448807 .. 2448830 + -15.4  -4.72272   CGCGAAGTAACAAAA          TGGATGGTGC AAAT GCACCATCCA           TTTTTCATGCAAGGC 100 31
SH07_RS12100 2450264 .. 2450286 +  -6.3   -4.3208   GCACTTGTGGAGCGA          CATGCTGCCC GTCC GGGT-GCATG           TTTTCACTTGTCGGA  72 46
SH07_RS12105 NONE
SH07_RS12110 NONE
SH07_RS12115 NONE
SH07_RS12120 NONE
SH07_RS12125 NONE
        rnfD NONE
SH07_RS12135 NONE
SH07_RS12140 NONE
SH07_RS12145 2457732 .. 2457751 +  -7.9  -2.52234   GACATCTGAAGAAAA            GGGGTAA CACCGA TTACCCC             ATTGATAACCTTTCT  60 32
SH07_RS12150 2458118 .. 2458128 +  -2.6  -3.57792   AATCTGCCGTTACGT                 TTTT TGA AAAA                 TTTAACGCTGGATAA  50 90
        tppB 2459862 .. 2459884 + -13.5  -6.36459   GAAACTCTTTTACAA           GCCGCTAAC TTTTC GTTAGCGGC           TTTTTTTTTGTTCAG 100 49
SH07_RS12160 2460557 .. 2460570 +  -5.9  -3.28924   TAAAGTAATAGCCAT               CGGCC CACA GGTCG                TTGTGGGCCGAAATG  57 33
SH07_RS12190 2465915 .. 2465950 + -11.8   -3.5332   CTCCGCGCTAAATAA    GTTTGCGTGTGGTCAG GTTA CTGACCACACGCCCCC     TTCATTTCACCCTTT  91 30
SH07_RS12200 NONE
SH07_RS12205 NONE
SH07_RS12210 2469949 .. 2469976 + -11.2  -3.69902   TTTGTGGATCAAGAT        GCCCGC-CTGCGG ATT CCGCGGCGCTGGC        TTTGCCATCTTTGGT  81 274
SH07_RS12230 2472176 .. 2472195 +  -4.9  -5.24129   AAAACATTATTGCGA            CGCCTGC CGTTTA GCAGGCA             TTTTTTATCACCAGA  80 12
SH07_RS12235 2473337 .. 2473354 +  -9.8  -2.78384   AATCCAACATTGCGA             GCGGCG TAAAGC CGCCGC              TATACTAAAACAACA  72 39
SH07_RS12240 2473817 .. 2473844 +  -9.9  -3.46647   GGGCAACTAATCTCC        TGCCGGGCGTGA ACTCA TCGCGCCCG-CA        TCTTTACTGCATCGA  78 31
SH07_RS12245 2474569 .. 2474600 +  -7.4  -2.79679   AGGTGTAATCGAGTC      GATGCCTGATGACAT GCA ATGAT-TCAGGCATC      TATAGTGAGGCTATT  59 33
SH07_RS12250 2479279 .. 2479306 + -15.7  -3.01791   GGGATAGAGAAAGGA        CTGACGGATGC CCGTTC GCATCCGTCAG         TATTGCAGGACGGAT 100 34
SH07_RS12260 2480821 .. 2480850 + -12.3  -3.59432   ACACTTCGCTAAAAC       TTTACCCTGTTGT TACG GCAACAGGGTAAG        TTCATCTTTTGTCTC 100 29
SH07_RS12265 2481655 .. 2481676 + -14.5  -5.38326   TGTCAGCAACTGTAA           CGCAGAAGG TTAT CCTTCTGCG            TTTTTGTTTAATTAG 100 154
SH07_RS12280 2484438 .. 2484452 +    -7  -3.07895   ACTATCGTCGTTAAT               CACCCG TTG CGGGAG               TCTCTTCCGGCTCCC  59 27
SH07_RS12290 2486889 .. 2486908 +  -7.1  -2.91276   ACGTCGGATTATAGA            CTCGCGG TTTTTT CTGCGAG             ATTTCTCACAAAGCC  61 225
SH07_RS12295 2488140 .. 2488160 +   -14  -3.60475   CTAAAGGCTATTCTA            TCGCCCCC TCTCC GGGGGCGA            TTTCAGATCAGGCTT 100 37
SH07_RS12305 2490405 .. 2490432 +   -12  -3.90048   CCCGCTAATAAAGAC        AAGGCGCAACCT TCAC GGGTTGCGCCTG         TATTTTTACGCAGGC 100 33
SH07_RS12315 NONE
SH07_RS12320 2492157 .. 2492175 +  -7.5  -3.45037   GTCCACTCGGACGCA             CCAGATT TTCTT AATCTGG             TCTTCTCCTTTTTCC  66 23
SH07_RS12325 2492587 .. 2492601 +  -8.5   -4.3014   ACAGAATTTAATCAA               GGGCG GTTAG CGCCC               TTTTCATCCCTGTCT  82 40
SH07_RS12330 2494553 .. 2494566 +  -8.1  -2.72144   CAATTCTGGCGTTTG               CGCCA AAGC TGGCG                ATTTGCACCAGGTCA  57 276
SH07_RS12370 2502710 .. 2502725 + -11.8  -5.99154   AATTTGTATATCGAA              GCGCCC TGAT GGGCGC               TTTTTTTATTTAATC 100 58
SH07_RS12375 2503246 .. 2503264 + -14.6  -6.02914   CTGTGAAGTGAAAAA             TGGCGCAC ATT GTGCGCCA             TTTTTTTTGTCTGCC 100 47
SH07_RS12430 2515761 .. 2515781 + -16.9  -3.61517   ATAAGTAATTTCTCA            TCAGGCGGC TCT GCCGCCTGA            TTGTTAACCACCGCT 100 33
SH07_RS12435 2516578 .. 2516606 +  -3.1  -3.33922   TTGTTACAACAATAA        TGAACGGATGCTG ACA CAACATCGCTTCA        CTTTTTAAAGCACCT  47 65
SH07_RS12440 NONE
SH07_RS12445 NONE
SH07_RS12450 NONE
SH07_RS12455 NONE
SH07_RS12460 NONE
SH07_RS12465 2523919 .. 2523954 + -14.7  -2.91276   AGAACAAATAATCTG    CAGGCGGCGCAGCTT CTTAAC AAACTGCGCCGCCAG     ATTTATCCAACAAGA 100 30
SH07_RS12480 NONE
        fixB NONE
SH07_RS12490 NONE
SH07_RS12495 2528554 .. 2528574 +   -14  -2.69057   TAATCATGCATCCCA            CAGGCCCG CATCT CGGGCCTG            ATGTTCTGTTTCGAG  95 38
SH07_RS12500 2530268 .. 2530294 + -10.7  -5.02645   TTCGGGGATCACATA         ACCCCGGCGAC TAAAC GCCGCCGGGGA         TTTATTTTATTTCTT 100 49
SH07_RS12515 2533833 .. 2533862 +  -4.3  -4.98468   CATGGGCCTTAGTCG       CCGAATGTACTAG AGAA CTAGTGCATTAGC        TTATTTTTTTGTTAT  74 13
SH07_RS12520 2535054 .. 2535077 + -15.4  -3.86822   CCGCTTCTGAATGCG          TGCCCATTCC TGAC GGAATGGGCA           TTTCTGCGCAACTTG 100 31
SH07_RS12525 2535748 .. 2535783 +  -5.4  -3.64164   TAATCGCTGCGCTCT    CGCGCCATCAGACTGAA TAA TTCATTCAG-TAGCGCG    TTATCCTCTTTTTGC  58 402
SH07_RS12600 NONE
SH07_RS12605 2551129 .. 2551141 +  -9.1  -3.67141   GCCCCGGAGGCATAG                CCCAG CGG CTGGG                TTTCACTGGCATTGT  73 316
SH07_RS12615 NONE
SH07_RS12620 NONE
SH07_RS12625 2554240 .. 2554256 + -10.8  -4.43477   TGGGTTGAGGATAAT              GGCCGC TCCGT GCGGCC              TTTTGATTAAATAAA 100 43
SH07_RS12635 2555618 .. 2555645 + -19.2  -4.15029   CTTCTCGGTTAATGA        CCAGGGGCAGTG ATCT CGCTGCCCCTGG         TTCTTTATCTGAAAT 100 29
SH07_RS12640 2556388 .. 2556404 +  -5.2  -3.70902   CAAAAATCACCTTTC              TGGAAT AAGCA ATTCCA              TTTGAATATAAGAGC  59 46
SH07_RS12645 2557902 .. 2557934 + -12.7  -3.83644   ATTAATTCTTATGCT      GGCAACGGTCCGTTT TGT ATAGGGGCCGTTGCC      TTACTTTTTAAATGT 100 36
        katE 2561695 .. 2561724 + -13.5  -2.95116   AAAATTCCTGCCTGA       TGGGAGGCGGCGC AATT GCGCCGCCTCAAA        TGATTTACATAGTGC 100 26
        nadE 2568889 .. 2568916 +   -12  -2.78371   GCGAAAAAGAGTAAT        TTGTTCACGCCG GATG CGGCGTGAACGC         CTTATTCGACCTATA  73 63
SH07_RS12710 2570411 .. 2570456 + -10.5  -3.53761   CCAGTAAAAATCACG TTTTGCCGGTGGGAACGTGCAA ATT TCGCGCGTTTC-ACCGGCAGCA TTTCGCCACAGATTC  78 468
SH07_RS12750 2578793 .. 2578809 +  -6.5  -2.80816   TCTGGGCGACCTTCC              GCCGCTA ATT TAGCAGC              TCTCCTGGCTCAAAC  55 18
SH07_RS12755 NONE
SH07_RS12760 NONE
SH07_RS12765 NONE
SH07_RS12770 NONE
SH07_RS12775 NONE
SH07_RS12780 NONE
SH07_RS12785 2584958 .. 2584971 +  -2.3  -2.70788   GAAAATTACAACAAA               CTGCG ATAA CGCAA                AGTTTTTCTCAATGC  40 17
SH07_RS12790 2586552 .. 2586564 +  -2.7  -4.26076   GTGCATAACCGGGGT                TATCA ATC TGATG                TTTTGCTGCCAGTGC  60 237
SH07_RS12800 2587586 .. 2587611 +  -7.5  -2.66272   GGCTGCGCTGACTGC         CCGCCTGAACT GAAC ACTTCTGGCGG          TACGTTTACCTCCAC  56 148
SH07_RS12810 2589418 .. 2589433 +  -3.2  -4.30719   GTATTTAACGGATGA              TGCTCC CCAC GGAACA               TTTCTTATGGGCCAA  61 163
SH07_RS12840 NONE
SH07_RS12845 2596269 .. 2596298 +  -9.4  -5.08824   CGTTAAGTCTTGTAC       TGA-GTGGCCGAC AGATC GTCGGCCACATTA       TTTTTTACGTCGACG 100 35
        ansA NONE
SH07_RS12855 NONE
SH07_RS12910 2609359 .. 2609376 + -11.3  -5.82316   ACTGTGATCTAAAAA             GAGCGAC TTCG GTCGCTC              TTTTTTTTACCTGAT 100 52
SH07_RS12915 2610285 .. 2610296 +  -4.4  -3.57507   GGCGCAATCCATTCG                CGTT GCGA AACG                 TTAATTTACGTTAAT  54 10
SH07_RS12930 2614384 .. 2614399 +    -4  -2.73875   ACTGTGCGAATGGTA              TTTGCG CGTA CGTAAA               TCGTCTTAACAACCC  46 1
SH07_RS12935 2615810 .. 2615836 + -11.6  -4.76892   TAAAGGCTAAAACTA         TCAGCCAGGTCA TTA TCGCCTGGCTGA         TTTTTAGCTTACTGT 100 31
SH07_RS12940 2617444 .. 2617462 +  -8.1  -4.20106   GCAAAAATATTCAGA             GCCATGC TTTTT GCGTGGC             TTTTGCATACAATTT  76 43
SH07_RS12945 NONE
SH07_RS12950 2619882 .. 2619893 +    -3  -4.61482   GCAGCAAGCGTAAAG                TAAG CAGG CTTA                 TTATTTTTTGGCAAG  65 264
SH07_RS12960 2620383 .. 2620404 + -11.5   -4.1711   ATCTCGCAATATATC           GGCCTGGCG TTTG CCCCAGGCC            TTTCTTAAACATAGT  93 44
SH07_RS12970 NONE
SH07_RS12975 2622984 .. 2623017 +  -3.8  -3.72984   TCTGCTGGCAATAGA     CCGACGCCGGATTTG CCATA CCAATCT-GCGGCGG     TTTAGGTGCTTCTGG  56 187
SH07_RS12985 2624293 .. 2624310 +  -3.3  -3.09131   TTGTCGCGCATCCAG             CGCTACA TTCC TGAGGCG              TATTCACATCCTTTT  46 12
SH07_RS12990 2624538 .. 2624555 +  -8.4  -3.95219   CTAAAAAATAGCAAA             GGCTGC CTGTGT GCAGCC              TTTGTGCAATTTAAG  77 126
SH07_RS13020 2628585 .. 2628601 + -13.7  -5.87996   ACCAGTTTATTTGAA              CCGCGTC ACT GACGCGG              TTTTTTTATTCGTTC 100 47
SH07_RS13025 NONE
SH07_RS13030 2631376 .. 2631391 +  -4.6   -4.7373   TCGGCGGCGGTATTT              TCCGCC GCTG GGCTGA               TTTTTGATGGAGTAC  71 46
SH07_RS13035 2632377 .. 2632427 + -18.3  -4.26344   GTGTTGGATTTGTAG TTTGCCGAAGCCGGATGTGGCGC TGAGC GCGCCCAGTCCGGCTTCGGAAGA TTTTACTGCGGATAT 100 26
SH07_RS13065 2639671 .. 2639681 +    -4  -3.06515   ATATAGCCTTATCGA                 TAAC ATG GTTA                 ATTTTAAGGATAAGA  47 419
SH07_RS13070 2640028 .. 2640058 + -11.3  -4.84359   AGCATAAATGGGTCA       GGACGCTTTTAAT CACAT ATAAAAAGCGTCC       TTTTTCTCACAATCA 100 55
        pabB NONE
SH07_RS13085 2642460 .. 2642479 +  -6.4  -2.58427   CGCTGTTATTAGTTC            GTTACTGG AAGT CCAGTCAC             CTTGTCAGGAGTATT  54 171
SH07_RS13090 2643872 .. 2643898 +   -13  -3.88583   GACTAATACTTCTTA         CTCGCCCATCTG CAA CGGATGGGCGAA         TTTATACCCGCTTTC 100 35
SH07_RS13095 2645581 .. 2645593 +  -6.3    -2.567   TCACGCCCATTATGC                CGTTA CGT TAACG                CTTACTCATCTTCAT  53 15
SH07_RS13110 NONE
SH07_RS13115 NONE
SH07_RS13120 2650329 .. 2650346 + -14.1  -5.71712   ACTGTTGTACACTAC             CGGGGCC TTTT GGCCCCG              TTTTTTTATCTGGAG 100 42
SH07_RS13125 2650836 .. 2650887 +  -9.8   -3.1577   AATAAGTTATGAATT TAGCCAAAGCTATGTTTAGTGTATT TTT AATA-ATCAGACATAGCTTAGGCTA TATTACCTCTTCCCT  74 36
SH07_RS13130 NONE
SH07_RS13135 2652236 .. 2652257 +  -4.3  -4.43501   CACAAAAAGTGACCT           GCGGATAGCG TTT CGCCG-CCGC           TTTTATCGCTACCTT  67 441
SH07_RS13155 2653525 .. 2653542 +  -9.9  -2.65354   ACCCTAAAGAGAAGT             CAATCCC CAAA GGGATTG              TAAATTTAAAATAAG  71 225
SH07_RS13170 2654834 .. 2654864 +  -6.9  -3.29471   CTCATGCTAAATAAA       GAACCTGTCTG TTTGATATT CCGACAGGTTC       TTACTCTCATCAGAA  61 129
SH07_RS13180 2657221 .. 2657240 + -10.7    -4.946   CAGGGCATAAAAAAA            GCGCGTC GATCAG GACGCGC             TTTTTAGTATTTACT 100 31
SH07_RS13205 NONE
SH07_RS13210 2665717 .. 2665742 + -14.7   -3.9712   CCAAATAATGCCCAC         TGCTCCGGCGT GCCT GCGCCGGAGCG          TTTATGCTAAACTGC 100 33
        yebU 2667231 .. 2667247 +  -2.2  -2.63208   CGGTAACGCCTGACA              GCGC ACAAAAAAA GCGC              ACTTTTTGACTGGCA  40 28
SH07_RS13220 2667594 .. 2667610 +  -7.9  -4.12857   CTGATCCAAAAAGAA              CCCGTCG GCA TGGCGGG              TTATTTGTCCTGGTT  76 37
SH07_RS13225 2668128 .. 2668138 +  -2.4  -3.00298   AGCAATAACATGCTT                 GCCG GTG CGAC                 TGTGTACTTCAAGAA  42 275
SH07_RS13255 NONE
SH07_RS13260 2671670 .. 2671686 +  -2.1  -3.07233   TACGCTAGGCTTTTT              CGGCCTG GAG CATGCCA              TGTTGCGCATTATCG  43 33
SH07_RS13265 2672752 .. 2672773 +  -7.3  -3.45366   GTACCTGGGCGATAA           CGCCGTGGAA TAA TTCCG-GGCG           TTGATTAATTGCAAC  61 429
SH07_RS13280 2675783 .. 2675795 +  -4.7  -4.73613   TTGATCATCTGCCCA                ACGCG CCA CGCGA                TTTTGTTGATAATCA  75 365
SH07_RS13295 2677651 .. 2677671 + -15.5   -4.4267   AAAACGCTACAAAAA            TGCCCGATC CTC GATCGGGCA            TTTTGACTTTTACAG 100 51
SH07_RS13320 2683141 .. 2683153 +  -6.2  -4.08651   ATGAGATTAATTTAT                CGCC ATCGC GGCG                TTATTTCATTCGGAT  69 79
SH07_RS13325 2684765 .. 2684783 + -10.3  -5.68438   TATCATCAGGCGAAG             GCCTCTC CTCGC GAGAGGC             TTTTTTATTTGATGG 100 133
        znuC 2688963 .. 2689002 +  -3.6  -3.33815   CGAATTGTTTTGCGT  CGGGGAAATGATCGCTCA TGAT TGAATTATTATTTCCCGG   TTGGTTAGCCGGGAT  49 5
        znuB 2689773 .. 2689825 +  -8.4  -3.03443   CCAGCTAATCTATCG CTGAACACATTTGTCGGATGCGGCG CGAG CGCCTTATCCGACCTACG-GTTCGG TATCTCTGGTAGTCC  65 33
SH07_RS13365 2692555 .. 2692584 +  -7.1  -5.02074   TAGCGGGCAGTTTCA       GCAAGGTGCGG ACCATATG CTGCACCTGGC        TTTTTTCGGCACTGC  86 161
SH07_RS13390 NONE
SH07_RS13395 2697803 .. 2697813 +  -2.4  -3.04894   CCTATCATAGACAGG                 TGCC ATC GGCC                 ATTTTAAAGGGAGTT  42 49
SH07_RS13400 NONE
SH07_RS13405 NONE
SH07_RS13410 2700116 .. 2700133 + -14.1   -3.0976   GTTTGCATAACCTCA             GCGCCCG TTTC CGGGCGC              TATTCACGTCTTACG 100 162
SH07_RS13435 2707383 .. 2707408 +  -9.8  -5.46657   TTTCGTGAGAGTGAA         GCCTGATCAGG GTTAG CC-GATCAGGC         TTTTTTATTGCCATC 100 47
SH07_RS13440 2708387 .. 2708397 +  -6.8  -3.32844   ACCAGCGTCATCAAT                 CCTG AAG CAGG                 TTGTCGCGTAGAAAG  59 386
SH07_RS13520 2725022 .. 2725040 +  -8.8  -3.06483   TATCGCGCTGCTGGC             TTTCCGCG CTT CGCGGAAC             TATCTGCTTTAGGTC  68 76
SH07_RS13550 2732264 .. 2732291 + -11.3  -5.52986   GAAGGTTTTGAGAAA        CCGCTGCCTCA TCTGTT TGAAGCAGCGG         TTTTTTTAATGGGAT 100 71
SH07_RS13560 2732929 .. 2732941 +  -9.1  -3.64488   GATGGCAAGAAATAG                CGCCT GCC AGGCG                TCTTTTCCGGCCATT  75 148
SH07_RS13565 2733348 .. 2733363 +  -6.8  -2.71364   TAAATATTTTAATCA              GCGAGG GGAT CTTCGC               TGATTAAAGAAATAG  56 38
SH07_RS13570 2734011 .. 2734033 + -16.3  -3.61178   AAAACTAATGCTCTC           CGGCGGCAG GTTTA CTGCCGCCG           TTTCAAATCAGTGAC 100 33
SH07_RS13580 2735705 .. 2735734 +  -7.9  -3.67517   GCCTCAAATTCCTTA       TTGGGTGCCAG AATTAACG CTGACACCCAA        TTTGGCCTCTTAATG  70 48
SH07_RS13620 NONE
SH07_RS13625 2740840 .. 2740866 + -12.3  -4.70659   GTCAGTAATATAAAA         CCGGCTGATAG CGTGC CTTTCAGCCGG         TTTTTGCATCTGGCA 100 33
        fliD NONE
        fliS NONE
SH07_RS13680 NONE
SH07_RS13685 2752436 .. 2752461 + -11.2  -3.90291   AGAGGTGATTTAAAT         TCATCCCCGGC GGCAA GCCGGGGA-GA         TTTCATTACGGCAGT  88 28
SH07_RS13695 NONE
SH07_RS13700 2754508 .. 2754536 + -11.7  -2.83748   TCAGAAGTAATCCCT        CATTCCCGCTGTG ACC CACAGCGGGAACA        TCGTTACCTTTGTAT  81 31
SH07_RS13705 NONE
SH07_RS13710 2755874 .. 2755908 +  -3.5  -4.55295   AATTGCCATGAGCCA     GACGCAGCACATT CTTGCATTC GACGTGCTGCGCC     TTTATTTATCACCAG  65 30
SH07_RS13725 2757616 .. 2757630 +  -4.3  -4.88067   TAACGCCACGCCGGG               TTCAC CGAGA GTGAA               TTTTTCTGCCTGCGT  79 71
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ NONE
SH07_RS13760 2764278 .. 2764288 +  -3.2  -2.79831   GCGTGTAACAGGCAA                 CAGC GGC GTTG                 ATATTTTCGCCTAAC  43 1
        fliL NONE
        fliM NONE
        fliN 2766276 .. 2766286 +  -2.4  -3.22298   TCTGAGCGAATGCGC                 CGCC TGA GCCG                 TTAGTGATGAATAAC  43 11
SH07_RS13780 2766641 .. 2766662 +  -4.3  -3.17798   AAAAATTTGCTTAAG           CGTAGCGGG AGAT CCTGATGCG            TCGTTTATTGTCTGT  49 8
        fliP NONE
        fliQ NONE
        fliR 2768443 .. 2768464 +  -2.4   -2.7556   TTTGCTGGCTGATAT           TATTAGTG AATTGC CATTAATA            TAATTCCGTAACGTT  41 1
        rcsA 2769377 .. 2769422 +  -9.7  -2.61126   TTTTGTCAACATGCG CTAACACATTCTGACTGGTGG TTTC CCACCAGTCAGGCTGAATAAG ATTACTCTGCTTTCT  71 22
SH07_RS13810 2770230 .. 2770260 +    -4  -4.12188   TCAGCGGGATCGCTC       CCGAAAAAATCATC TTT GATAATTTGTGCGG       TTTTGAGAATCATCC  61 253
SH07_RS13815 2771469 .. 2771483 +  -3.5  -3.62096   CGCCTGATGACCAAA               GCGGT CATTA ATCGC               TTTAAAATGGTCAAG  53 379
SH07_RS13835 2775739 .. 2775762 +  -3.2  -4.07568   ACGCAACGCCACCGC          CTGTTTGA TTTTTGGC TCAAGCAG           TTTTGCCACCGCGGC  58 516
SH07_RS13865 2780076 .. 2780105 + -13.7   -5.4756   TAAAACTGAACACTA       GCCTGAGTTCG TCCCTCAT CGAACTCAGGC        TTTTTTATTGGCATT 100 69
SH07_RS13875 2781511 .. 2781543 + -10.6    -5.055   AAGCGCATAATCAAT     CGCGGCCGCGTTAGT ACTC AC-GACGTGGCTGCG      TTTTTTCACGGTTAA 100 61
SH07_RS13890 2784176 .. 2784187 +  -5.8  -2.73875   CATAAATATGTAAAA                GCAG ATCT CTGC                 TACTGTTAGGGAGGA  53 43
SH07_RS13895 NONE
SH07_RS13900 2786067 .. 2786081 +  -4.2  -2.84527   GATAAGTAGAACTGA               GAAAGC CAT GCTCTC               GTTTCCTAAGAGTTG  46 185
SH07_RS13905 2786905 .. 2786937 +   -13  -3.14602   TGAACGCAAGCTAGC     TACAGACACGCTCAT CACT ATGA-CGTGTCTGTA      TATTAATAAGCTAAC  95 116
SH07_RS13910 NONE
SH07_RS13915 2787937 .. 2787960 +    -6  -3.94773   TTATGGACTTTGTCC          CGCGGCT-TTA ATC TGACGGCCGCG          TTCCTTTTTTGACTC  66 10
SH07_RS13925 2789216 .. 2789227 +  -4.4  -3.29727   TGATACAGACTCGTT                TTCG GCGA CGAA                 TGTTCATTAATTAAC  51 4
SH07_RS13930 2789503 .. 2789529 + -15.9  -4.34402   TTTTAACATCTTAAG         CGCCCTCGACC TTTAT GGTTGAGGGCG         TTTTGCTATGAACGC 100 115
SH07_RS13935 2796826 .. 2796847 +  -8.7  -5.16572   TTATAATTTCTTAAA           GAGTGTTCC ATTC GGGGCACTC            TTTTTTACATTCCCT 100 48
SH07_RS13945 2799751 .. 2799782 +  -7.2  -2.70854   TCAACGCGCTTGATA      GCCTGGCGAAGATC ATCC GATCTTCGCCTTAC       ACTTTTGTTTCACAT  58 28
SH07_RS13950 2801360 .. 2801392 +  -9.9  -3.34013   TAAGTAAGACACCTG      GCAAATAGCCTGCAA TAA TCGTGGGCTGTTTGC      TTCCTTGGGCGGATA  76 81
SH07_RS13955 2802371 .. 2802405 + -13.9  -2.90382   ATCTCTAATTATCTT     TTAAAGAAATCTGTC TTTAC GGCAGATTTCTTTAA     TCTCATATAATTCTT 100 33
SH07_RS13970 2804728 .. 2804746 +  -5.9  -4.86133   CCAAATTCCTGAAAA             GCCCGCT TTTAT AGCGGGA             TTTTTGCTATATCTG  78 38
SH07_RS13985 2807136 .. 2807153 + -11.3  -5.05505   GCCAAATTCAAAAAA             GCCTGCT TTCT AGCAGGC              TTTTTGCTTTCTAAT 100 37
SH07_RS14035 NONE
SH07_RS14040 2816267 .. 2816294 + -17.8  -5.45652   TGTAACCCTTTACCT        GCCGGTATCCAC GTTT GTGGGTACCGGC         TTTTTTATTCACCCT 100 292
SH07_RS14045 2819452 .. 2819509 +    -7  -3.01791   TGACCTTCTGACAGA ACC-AT-CGCCTCTCTGTGGTCCCGGTCA TCA TGACCGGGACC-CGGACCGGCGCAACGGA TCTTCAACGCCACAT  58 30
SH07_RS14050 NONE
SH07_RS14055 NONE
SH07_RS14060 2821835 .. 2821849 +  -4.3  -3.30124   TGAACTGAGTGGGAA               TTCTG ATGAG CAGAA               TTATCGCCACTACCG  51 33
SH07_RS14065 2822294 .. 2822315 + -10.1  -2.55811   ATAGCCTTCTGCTAC           GGCCTGGTG TTTT CACCACGCC            ACTTTTCCATTTTTA  70 50
SH07_RS14070 NONE
SH07_RS14075 NONE
SH07_RS14080 2823080 .. 2823102 +  -9.9  -4.61873   CTTCATTTCTCCTGA          CGCCAGCCTG AATA CAG-CTGGCG           TTTTCATTTATAAAC 100 56
SH07_RS14085 2823782 .. 2823804 + -16.4  -3.05384   AGAATCAATGAGCAA           TGAGGGTTGC CGG GCAACCCTCA           TTGAATAAAACGGGA 100 87
        sbcB 2829095 .. 2829105 +  -6.8  -2.63991   GTCCTTCTTCTGCCG                 CCCA CTG TGGG                 ATTGCTTCAGTTGCC  52 148
        hisG NONE
        hisD NONE
SH07_RS14160 2838204 .. 2838216 +  -3.3  -3.76224   GTCATTGACGCCTTA                CGTGC GGA GCAAG                TTTGATGAGTCAGAA  53 8
SH07_RS14165 NONE
        hisH NONE
SH07_RS14175 NONE
SH07_RS14180 NONE
SH07_RS14185 2842028 .. 2842051 + -12.4  -5.27335   ATCCGGCAAAAAAAC          GGGCAAGGTG TCAC CACCCTGCCC           TTTTTCTTTAAAACC 100 75
SH07_RS14370 2884463 .. 2884477 +  -7.1  -3.30124   ACGAACGCCTGATGC               GACGC TTTAC GCGTC               TTATCAGGCCTACAG  64 251
SH07_RS14390 2891361 .. 2891374 +  -8.1   -3.4252   CCCATCGCCTGATGC               GACGC TAAC GCGTC                TTATCATGCCTACAA  68 51
SH07_RS14405 2893786 .. 2893826 +  -3.2   -4.9218   TTCGTTAATTGAAAA ATGGCTCAGCAGC-GGC TTAAATCT GCCTGCGCCTGAGCCAG  TTTTTCTGCTGCCTG  71 33
SH07_RS14415 NONE
SH07_RS14430 2900011 .. 2900021 +  -6.8  -3.01712   AAAAAGGAGCACGCT                 CCTG ATG CAGG                 TGTTACCCCCGAGCA  58 21
SH07_RS14435 NONE
SH07_RS14440 NONE
SH07_RS14445 NONE
SH07_RS14450 NONE
SH07_RS14455 2909890 .. 2909907 +  -5.5  -4.18197   ACTTTAATCGGTAAA             CAGCACC TTTA GATGCTG              TTTTCGATACACAAT  65 165
SH07_RS14460 2910299 .. 2910309 +  -4.6  -3.53012   GGGCGTGGGTTGTTG                 GCGT CCG GCGC                 TTTACCAGAGCCCCC  55 51
SH07_RS14465 2911918 .. 2911943 +  -9.8  -4.62085   GGAACCACCTCCTTA         GCCTGTGTAA TCTCCC TTACACGGGC          TTATTTTTTACGCGT 100 162
SH07_RS14485 2914411 .. 2914422 +  -5.8  -3.30124   CGTAATGCCGGATGC                GGTG TAAA CACC                 TTATCCGGCATACAG  57 73
SH07_RS14495 NONE
SH07_RS14500 2916556 .. 2916581 + -12.6  -2.72511   CTGTTTTGCACAATA         C-CGGGCCAGC ATCAC GCTGGCCCGCG         GTTTCAGGGAATGAG  88 431
SH07_RS14545 NONE
SH07_RS14550 NONE
SH07_RS14555 2926848 .. 2926892 + -15.8  -3.79993   GCTGTACTCAATAGG CCGTTGCTGTTGGTCAAGCG CCACT TGCTTGATCACCAGCACCGG TATTTTGCTATCTAA 100 62
SH07_RS14585 2931574 .. 2931592 +  -7.4  -4.08919   CTCTCTGCTCGCTAA             GGATGCTT TTA GGGCATCC             TTTCATTTACACTTT  73 108
SH07_RS14590 2932512 .. 2932528 +  -5.1  -3.28791   TTTATTGTTGCTTTG              TTACCTG TGG CTGGTAA              TTGTGAAACGGGAAT  54 489
SH07_RS14615 2937357 .. 2937372 +  -3.2  -2.65388   CGGGCGAAGAAAACA              GATGAC GGGT GTCAAC               ATTATACGTTAACTG  42 41
        metG 2941095 .. 2941114 + -10.7  -5.01553   ATAATCCCCCTTCAA            GGCGCTG CATCGA CAGCGCC             TTTTCTTTATAAATT 100 37
SH07_RS14635 2942525 .. 2942559 +  -3.5  -3.61398   GAAAGCCATTGCTGC    GTTCCCACA-TGCAGC AATG GCGGCACTGACGGAAC     TTCTTGGGCAAAAAG  53 502
SH07_RS14640 NONE
SH07_RS14645 2948669 .. 2948690 + -11.6  -3.29043   TCCATTAAAACACAG           CGGGCAGT GATGCA ACTGCCCG            TTATCAACACGACTT  86 33
SH07_RS14650 2949198 .. 2949240 +   -16  -2.90725   TTAGGCCTGAAAATA GTAAATAAAAGAACCTGC CTCACCA GCAGGTTTTTTTATTTAC TGTGATCTGCTTTCC 100 184
SH07_RS14655 NONE
SH07_RS14660 NONE
SH07_RS14665 2953843 .. 2953854 +    -3  -3.07816   GGCTTGCGGAGAATC                TTCA GTCA TGAA                 TTCACTACGTCCGGA  46 15
SH07_RS14670 2955929 .. 2955945 + -10.9  -3.46081   TATCCTATATAGCCC              CTGGTGA GAG TCACCAG              TTCCTTGATTAAATA  83 260
SH07_RS14675 2956441 .. 2956471 +   -17  -5.16472   AAGTGAAATAATCGG       TTGGCGGTCATGCT CTA AACATGACCGCCAA       TTTTTTAGCCTTTTT 100 30
SH07_RS14695 NONE
SH07_RS14700 2960868 .. 2960878 +  -6.8  -2.70932   CCGTAAAGGATCAAG                 GCGA TAA TCGC                 TGGTTGCAGACCAAA  53 379
SH07_RS14730 2968716 .. 2968732 + -10.8   -5.8096   GCCGTCTGCCCCGCC              GCCGCC ATTTG GGCGGC              TTTTTGTTTTTTATA 100 91
SH07_RS14745 2971192 .. 2971205 +  -8.1  -4.25104   TACCATGCCTGATAC               GACGC TTGT GCGTC                TTTTCATGCCGACCA  79 88
SH07_RS14760 2974082 .. 2974110 +  -7.3  -3.04398   CACATCCATGTGGGC        TGCCCCGGCCTTC AGG GAACGCCTCGGCA        ATTTTGACGCCACCA  61 292
SH07_RS14770 NONE
SH07_RS14775 2976474 .. 2976484 +  -6.8  -4.87037   GGCTAAAATTTGCGA                 TGCG TCG CGCA                 TTTTTGATGTATGTT  82 35
SH07_RS14780 2977546 .. 2977562 + -10.9  -4.15044   TGGTGTCGAAATTCC              CGGCAAA CAG TTTGCCG              TTTCTTGCGCAAAAC  93 93
SH07_RS14785 NONE
SH07_RS14790 2978641 .. 2978669 +    -6  -3.58242   TACTTCACCTGATAA        GCTGCGGATA TCACATTCC TAACCGCAGC        TATTTGTGAATCTTT  61 77
SH07_RS14795 NONE
SH07_RS14800 2981354 .. 2981385 +   -13  -2.82482   TTGAGCTTATTGTAG      GCCGGATAAAACGC GCCA GCGTTGCATCCGGC       ATTTGGCTCCTGTTG  91 129
SH07_RS14830 2987729 .. 2987760 +  -5.8  -3.21099   AGCGATACGCCCAGT      CC-AGCTGCCATTGC AGG GCGATGGCAGGAAGG      TTAATGGTCACCCCA  55 366
SH07_RS14845 NONE
SH07_RS14850 2990280 .. 2990295 + -11.8  -2.56271   CTGAAGTGAAAGTCC              GCCCGG TTCG CCGGGC               ATCTTCTCATCAGAA  81 32
SH07_RS14870 NONE
SH07_RS14875 NONE
SH07_RS14880 2998332 .. 2998346 +  -7.1  -3.30124   AATGTTGCCGGATGC               GACGC TTAAC GCGTC               TTATCCGGCCTACAA  64 42
SH07_RS14895 3001559 .. 3001578 +  -4.3  -3.28857   ATTATTTTCAATAGC            GCGATTGC CGGAT GCAA-CGC            TTAATACGTTTTATC  51 43
SH07_RS14930 3010923 .. 3010942 +    -5  -3.97443   TGCCCGAAAGGCCCG            TCGCGA GTACTTTG TCGCGA             TATTTTTGACATTTT  61 377
SH07_RS14940 3011570 .. 3011589 +   -10  -5.46129   GCCGCATGCAGAAAA            GGGATAGC TCAG GCTGTCCC             TTTTTTAATTTATTA 100 46
SH07_RS14945 3013249 .. 3013287 +  -8.1  -4.03183   TTTAACGATTTCTGC   GGTTAAAGCGGATGAAG CTCAC CTTCGTCCGCTCTCCCC   TTCTCTTTTCTGCCT  74 36
SH07_RS14950 NONE
SH07_RS14955 3015443 .. 3015454 +  -2.2  -5.61596   AGGTAATTAGTCTCG                TGTC GCTT GGCA                 TTTTTTTATAACGAT  82 374
         spr 3016122 .. 3016139 + -11.3  -5.85244   ACGAGTTAACTGAAA             GCACTGC TTAG GCAGTGC              TTTTTTGTTTTCATT 100 75
SH07_RS14965 NONE
SH07_RS14970 NONE
SH07_RS14975 NONE
SH07_RS14980 NONE
SH07_RS14985 3023496 .. 3023507 +  -2.2  -3.53012   CATGTTGCAGCAAAC                TCGT CCTG GCGA                 TTTACAAACAGGCAC  47 105
SH07_RS15005 3027997 .. 3028022 +  -7.5  -2.70525   AAAGCAGATCACTTA         CCTGTTGCTGG GTCG CCTGTAGCAGG          ATTAATTTAAGAGAG  58 103
SH07_RS15010 3028344 .. 3028373 + -15.9  -2.90219   TTGCTGAATAAGTTG       TAAAAAACCCCGC TCCG GCGGGGTTTTTTG        TATCTGCAGATTATG 100 41
SH07_RS15020 NONE
SH07_RS15025 3031651 .. 3031687 + -12.5  -3.18634   AGACGAGAAGCGTTT    TATCGCTAACTGATTAA TTA TAAATCAGTTAGCGAAA    TATCTTACTTGCAAT  93 13
SH07_RS15030 3031832 .. 3031848 +    -8  -5.76633   AATCCCAAGAAAAAA              CCAACC CTTAC GGTTGG              TTTTTTTATATCTGC 100 43
SH07_RS15050 3036855 .. 3036879 + -11.4  -4.29436   CTTTGTCAACAGTCT          AGCCCGATGG CATCA CCATCGGGCC          TCTTTTTATTTACTC 100 206
SH07_RS15130 NONE
SH07_RS15135 3050007 .. 3050020 +  -8.1  -3.30124   CCGGTTGCCTGATGC               GACGC TGGC GCGTC                TTATCAGGCCTACAC  66 112
SH07_RS15180 NONE
SH07_RS15185 3062364 .. 3062397 + -14.7  -3.55622   GACTAATCACCTGTA     GGCCAGATAAGACGC GTTA GTGTCTTATCTGGCA      TTTGCACCGATTGCC 100 35
SH07_RS15195 NONE
SH07_RS15200 3068787 .. 3068833 + -10.2  -2.90904   TGTATAACACCAAAA CTTGCTATGCAGAAATTTGCAC AGT GCGCAATTTTCTGCATAGCCGC TCATTCTCCTTATAA  76 34
SH07_RS15205 NONE
SH07_RS15210 NONE
SH07_RS15215 NONE
SH07_RS15220 3072831 .. 3072856 + -14.1  -4.64676   ATTAATCAATAAAAA         CACCCGATAGC GAAA GTTATCGGGTG          TTTTCTTGAACATCG 100 36
SH07_RS15260 3085860 .. 3085904 + -12.3  -3.53811   ATGCGACGCTTGCCG CGTCTTATCAGGCCTAC AAATGCTCCCC GTAGGCCGGATAAGGCG TTTACGCCGCATCCG 100 69
SH07_RS15270 3090327 .. 3090339 +  -3.3  -2.64616   TGTTCTAAGCAGCTT                CCCGT ACT ACAGG                TAGTCTGCATGAAAC  42 41
SH07_RS15275 3092798 .. 3092815 +  -7.7  -3.88291   AGCGTGAACGCCTTA             TCCG-GCC TAC GGCTCGGA             TTTGTAGGCCTGATA  72 146
SH07_RS15280 NONE
SH07_RS15285 3094298 .. 3094348 + -13.5  -3.07113   AATCGAGATGTGAAT TGGTTGTAGTGCCAGATACAACGC TTAT GCGTCTTATCTGGC-CTACAACGA TTACATGGCGTAGTA 100 28
SH07_RS15295 3095848 .. 3095879 +    -3  -3.73534   TCAGCTGTACCAGAT      TGAGCTCCATGCCCA TTT TGGGT-TCCAGCTCA      TTCTTAATACGCTTC  53 453
        glpA NONE
SH07_RS15315 NONE
        glpC 3102251 .. 3102278 + -14.2  -4.65895   TAAACTCCTTTCTGA        TGCCCGGTAAGC ATGT GGTTACCGGGCA         TTTTTGCGTACACGA 100 38
SH07_RS15325 3103323 .. 3103347 +    -3  -3.13522   CTGATATTCCGAACT          GTCATTAA AAGGAGAGA TTAATGAC          TATTGCTGAACGGCT  46 18
SH07_RS15330 3103537 .. 3103561 +  -2.7  -3.84825   CCACTAATTAACACA          GGCCCACAG CCGATCC CCATGGGCC          TTTGATATCAATAAC  52 34
SH07_RS15365 3110992 .. 3111013 +  -3.7  -4.79352   ACGACAACCGGGTGC           TGCTGTGCCA GTC TGGC-CAGTG           TTTTATTGTCGATAC  73 512
SH07_RS15375 NONE
SH07_RS15380 NONE
SH07_RS15385 NONE
SH07_RS15390 3116431 .. 3116443 +  -4.1  -2.57985   AATTGCGGGTAGTCG                CTGAT GAA ATCGG                TACGTTACCTTATCG  45 22
        arnT NONE
SH07_RS15400 NONE
SH07_RS15405 3118947 .. 3118972 +  -6.1  -2.58667   AATCCCCCACTTTCA         CGGCGAAGTCA CTCT TCACTTCGGCG          ATCATTTTTATCGCG  50 168
SH07_RS15455 3128071 .. 3128089 +   -11  -3.28712   GCTTATTATTAAAAA             CAGGGCGA AAC TTGCCCTG             TTATCGCAACCCGCG  81 45
SH07_RS15460 3129463 .. 3129505 + -13.7  -3.73224   TAACATCATTGTTAA TTA-ATTCGACCAGTCAGCA AATA TGCTGACTGGTCGAACATAG TTTGCTAAACAGTCA 100 38
SH07_RS15470 NONE
SH07_RS15475 NONE
SH07_RS15485 NONE
SH07_RS15490 3135531 .. 3135549 + -11.7    -2.981   TCTTTTTCAGAAAAA             CCGCCGA GCATG TCGGCGG             CTTTCTGACTTACAA  83 66
SH07_RS15565 3154314 .. 3154340 +  -9.4  -3.28791   CTGTAATCTTAATTT         CACTGCCGGA GATTGCA TCCGGCAGCG         TTATCCCGCCACAAT  74 35
SH07_RS15570 3154995 .. 3155042 + -12.8  -3.28712   CGCTGTAAGCAGCCG GAGTCTG-CGTCGCATCAGGC AATAAGC GCCGGATGCGACATCAGGCTC TTGTCAAAACGGAAA 100 33
SH07_RS15600 3160202 .. 3160229 + -16.4  -4.36914   CTGACTGCCTGATTT        CA-CACCGCCAGC TCA GCTGGCGGTGCTG        TTTTGTAACCCGCCA 100 29
SH07_RS15605 3162458 .. 3162480 + -10.7  -5.64304   CTGCGGATATCTGAA           CCGGAAATA ATCAC TATTTCCGG           TTTTTTATTCTCTTA 100 66
SH07_RS15610 3164137 .. 3164154 + -12.7  -5.32944   CACTAAAAATGTTAA             GAGCCGC AATT GCGGCTC              TTTTTTCATTCTGCC 100 35
SH07_RS15630 NONE
        folX NONE
SH07_RS15640 3168397 .. 3168410 +  -3.7  -3.98214   AAATGCACGAAAACG               CTGGG CATC CCCTG                TTTGTAATACGTAAT  58 295
         flk 3184589 .. 3184601 +  -4.7  -2.78384   GCCAGCGGCCCGGAG                ACGCC GAG GGCGA                TATCCTGAAACGCGG  46 143
        mnmC 3189324 .. 3189335 +  -7.2  -3.30243   GTGTTTGCCGGATGC                GGCG TGAA CGCC                 TTATCCGACCTACGT  64 53
SH07_RS15775 3194717 .. 3194738 + -17.3  -2.72799   CCAGGTACGGGTAAT           GGCAGGGGC GAAT GCCCCTGCC            TGGTGTATCTAAGGG 100 59
SH07_RS15835 3208194 .. 3208214 + -15.5  -3.64822   GTTCGCCTGGATAAA            GTCACCTGC ATA GCAGGTGAC            TTTAACTCCCCCACT 100 47
SH07_RS15840 3209743 .. 3209762 +  -8.6  -5.85425   GATAACAACAAAAAA            GGTGAGTT TTGC GACTCACC             TTTTTTATTTGTTTC 100 172
SH07_RS15850 3211799 .. 3211817 +  -4.5  -2.82516   CGGCAGCGTACTTAC             CCCGC ACTCCATTA GCGGG             TATACTCATGCCGCA  49 65
SH07_RS15855 NONE
SH07_RS15860 3213253 .. 3213286 +    -9  -3.01857   ACAACTATCGAATAG     CACAAAGTCTTGCA ATCCAG TGCAAAGCTTTGTG      TGTATAAGTTTTGTC  68 50
SH07_RS15865 NONE
SH07_RS15870 NONE
SH07_RS15875 3216183 .. 3216197 +  -4.2  -2.56271   ACAACAAACCCCCTC               CAGAAC CAA GTGCTG               ATATTATCATCAACA  45 220
SH07_RS15880 3216987 .. 3217014 +  -8.6  -3.96148   AGCTTGCGTGTAATC        CTCTTTC-ATCTC CAA GGGATAGAAAGAG        TTTGTAGTCGCGGAA  74 381
SH07_RS15915 3219503 .. 3219516 +  -2.5   -4.0942   CATTAATATCATTCT               TAATT AACT AATTA                TTTATCTCATCACTG  57 35
SH07_RS15920 3220399 .. 3220414 + -10.4  -3.86346   TTTCATTACTGCAAA              TGCCCC TGCG GGGGCA               TTTATGGAAACGTAA  86 41
SH07_RS15925 NONE
SH07_RS15930 NONE
SH07_RS15935 3221796 .. 3221808 +  -4.8  -3.20878   AGCGTATTTTTATTA                CCTG ATTTG CAGG                TTCGATTCCCTATTC  51 116
SH07_RS15940 3222198 .. 3222211 +  -2.3  -4.81852   GCCGAATAAGGCACA               CCAGG AACT CGTGG                TTTTATTCATTATGA  66 186
SH07_RS15950 NONE
SH07_RS15955 3226052 .. 3226062 +  -5.4  -3.53224   TATCTGGCAAAAGGC                 CGTT AAT AACG                 TTTCAACGCAGCATC  57 20
SH07_RS15970 3229933 .. 3229955 +  -4.2  -2.71712   TATTTTTCTTCTCTG           TTGTGGTC TTTGGTC GACCATAA           GTTTCGCAGACGAAG  45 62
SH07_RS15975 3233501 .. 3233527 + -10.9  -3.34517   AATGACTAAATAGCG         GCTCCCACAAT GTTCA AATGTGGGAGC         TATTTACCAGCACAT  81 32
SH07_RS16005 NONE
SH07_RS16020 3242126 .. 3242153 + -11.4   -5.4756   TCCCTCCTCAAATCG        GCCATAATAACC TCAT GGTTTTTATGGC         TTTTTTCTTAAGGTT 100 59
SH07_RS16030 NONE
SH07_RS16035 NONE
SH07_RS16040 3247518 .. 3247533 +  -3.3  -3.53444   TTTCAGGGCTAACGT              CAGAA GGTTAA TTCTG               TTTCCAGCAGCGTCA  49 29
SH07_RS16075 3256458 .. 3256475 +  -5.5  -2.77791   GTTATGGCGATGATA             CGGGG CTTTACCT CCCCG              TAATATTGCGTTAAC  50 70
SH07_RS16080 NONE
SH07_RS16085 3257192 .. 3257202 +  -6.8  -2.79796   GACTCATAACCAGAA                 TCCG TGT CGGA                 TCTAATCCCATCAGA  53 281
SH07_RS16095 3259801 .. 3259822 +  -4.4  -3.52073   AAGCCGGGGATAATT           CCCATAAG CGCTAA CTTAAGGG            TTGTGGTATTACGCC  52 55
SH07_RS16100 3260994 .. 3261020 +    -8  -3.14683   GGAGAATAACAAAAA         TGGTCATCTGGA GCT TACAGGTGGCCA         TTCGTGGGACAGTAT  63 49
SH07_RS16120 NONE
SH07_RS16125 3264741 .. 3264763 +   -12  -4.55887   AGCATAAATAAAAAA           CGGCAGGATA TTA TCTCCTGCCG           TTTATCTTTTTACAC 100 34
SH07_RS16135 NONE
SH07_RS16140 NONE
SH07_RS16145 NONE
SH07_RS16150 3266858 .. 3266888 + -17.1  -2.90212   GCACGACCCACCAAT       GTAAAAAAGCGCC CTAAA GGCGCTTTTTTAC       TATCTGCGATACTCA 100 28
SH07_RS16175 3271424 .. 3271446 + -17.8  -2.56571   TAACTTCTGATTGAT           TACTGCCGGG GCT CCCGGCAGTA           TGAATTCACTCTATA 100 31
SH07_RS16185 3273482 .. 3273514 +  -2.8  -4.25104   CTTAAAGCGGACGCT     TC-AGGGGCTGGAC CAGTTGC GTC-AGCCCCTCGG     TTTTAATCAGCAGCG  59 36
SH07_RS16205 3277791 .. 3277810 + -12.8   -3.7347   CGTTTGTGTGAAACA            GGGGTGGC TTAT GCCGCCCC             TTATTCCATCTTGCA 100 65
SH07_RS16210 3278936 .. 3278951 +    -9  -5.26316   AAAATGCGTAAAAAA              GCACCT TTTT AGGTGC               TTTTTTGTGGCCTGC 100 54
SH07_RS16215 3279537 .. 3279560 +  -4.5  -4.11692   GTTAAACTGATGGCG          GAACTCGAG TAATTT CCCGGGTTC           TTTTAAAAATCAGTC  63 14
SH07_RS16220 NONE
SH07_RS16225 3281890 .. 3281907 + -12.7  -5.71983   TGCCGCAGTGAAAAA             TGGCGCC CATC GGCGCCA              TTTTTTTATGCTTCC 100 45
SH07_RS16235 3283229 .. 3283248 +  -2.1   -3.5394   GATAAAACGGTGCCT            GCGGA AGGAAATTAA TCCGC             TTTGGGAAGGCATTT  47 11
SH07_RS16240 3284047 .. 3284105 +  -8.9  -2.78868   ACAACTGTTAAAAAA GTGCGCTTTGTTTATGCCGGATGCGGCG TAAA CGCCTTATCCGGCCTACA-AAATCGTGC TAATTCAATATATTG  67 62
SH07_RS16280 NONE
        murP NONE
SH07_RS16290 3295122 .. 3295149 + -14.2    -3.767   TGGTCAACAATCTGA        GGCCAGTCAGTA ATGT TACTGCCTGGCC         TTTAATCAATGAATC 100 214
SH07_RS16315 NONE
SH07_RS16320 3300138 .. 3300172 +  -7.1  -4.02456   TTCTCGCAAAACGTC    GCCAGCGCCTGTTGGAC AAA GCCCCACAG-CGC-GGC    TTTATGCTGCTCTTT  70 512
SH07_RS16415 NONE
SH07_RS16420 3320389 .. 3320440 + -15.8  -3.30243   TGATGGTGATTGCCG GATGCTGATTGCCGGATGCGACGC TGAC GCGTCTTATCCGGCCTACAGCGTC TTATCCGGCCTACAT 100 38
SH07_RS16440 NONE
SH07_RS16445 3329457 .. 3329478 +  -8.7  -4.70879   ATAAGCAATAAAAAA           GGCGACATG CCAA TGTGTCGCC            TTTTTCAACTTTCCG 100 37
SH07_RS16450 3329846 .. 3329859 +  -2.5  -3.60925   TTCTTAATGTTTACG               TTAAA AATG TTTAA                TATTATTTAATAGTT  50 160
SH07_RS16455 NONE
SH07_RS16460 3331460 .. 3331475 +  -5.4  -2.82623   CGTATCATGGAACAG              CTCGTC GCCT GATGAG               TGGTTCTGCAAGAGG  50 14
SH07_RS16465 3331729 .. 3331781 + -12.6  -2.52623   CGTAGGCCGGATAAG GCGTTAACGCCGCATCCGGCAATG GTGAA CGATGCCTGATGCGACGCTCACGC GTCTTATCAGGCCAG  86 55
SH07_RS16490 3336742 .. 3336760 +   -11  -3.41878   GCCCAGTTCCTGCCA             GTCGCTGT CAG ACAGCGGC             TTATAAGTTACGGCC  83 110
        gcvR NONE
         bcp 3339741 .. 3339754 +  -5.3  -2.68088   CATACCTCACTTCTC               GTGAT CAAG ATCAC                ATTCTCGCTTTCCCC  49 81
SH07_RS16515 NONE
SH07_RS16520 NONE
        hycD 3343513 .. 3343524 +  -3.6  -2.87211   GCTTGCATGGGTCTT                CTGG TTAA CCGG                 TCTGTAAGGAGCACT  45 7
SH07_RS16530 NONE
        hyfE NONE
SH07_RS16540 NONE
SH07_RS16545 NONE
SH07_RS16550 NONE
SH07_RS16555 NONE
SH07_RS16560 3350605 .. 3350620 +  -6.2  -3.15427   GCCAGAAAAATTGCG              TGAGAA GGAT TTCTCA               TTAATAAGGACTGTT  57 23
SH07_RS16565 3352627 .. 3352641 +  -3.5  -3.31766   TGCAGCGGCTGGGGA               TCTCG GTTCG CGAGG               TGTTGTAATCTGCTT  49 3
SH07_RS16570 3353522 .. 3353555 + -11.7  -2.96444   TCAGGAACCCTGAAA     AATCAGCCCGGCGAA ACAG TTCGTCGGGCTGAAG      ATTATTCTTGCGCGA  83 28
SH07_RS16580 NONE
SH07_RS16585 3357092 .. 3357125 +  -3.7  -4.11484   CCCAGATTCAACTGC     CGCGGTGGACGATCG CCGG TGATCAACAACCGTG      TTTTGCCCGATTCCA  60 443
SH07_RS16605 NONE
        purN 3361627 .. 3361646 + -10.7  -4.74504   CCCCCGTAATTAAAG            CGCCAGC TCTGCC GCTGGCG             TTTTTCAATTCACCT 100 43
SH07_RS16615 NONE
SH07_RS16620 3365399 .. 3365427 + -18.2   -3.6279   CGCCGCTTAATACTT        TGCGGGCCGACG AGAAA TGTCGGCCCGCA        TTATTCAGGCACTTT 100 31
SH07_RS16635 3368272 .. 3368301 +  -2.1  -3.63045   TCGCTGTCGGATGCT       TTTGCTGTTTGGG ATTA TCAAAGCGGCAGA        TATTCTTTCATCTTA  49 79
SH07_RS16640 NONE
SH07_RS16645 3369642 .. 3369671 + -12.3  -3.41693   TAATTCTTGAAGATA       AAAAACCCTCTGT AGTA ACAGAGGGTTTTG        TTCATTCATAGTGCA 100 65
        xseA 3374380 .. 3374416 +  -5.8  -4.09685   TCGATATCAAGCCAT   GCCCGTGCTGACAGAAG TAAT CTACTG-CACCACAGGC    TTTTAACACCTGCAA  68 66
        sseA 3392085 .. 3392128 + -18.4  -2.90194   GAAATAAGTATTTTA CAGGCAATAAAAAACCGCCG AATT TGGCGGTTTTTTATTGCTAG TCTGGTTCGCGGCCT 100 34
SH07_RS16780 3402967 .. 3402978 +  -5.8  -3.18264   TGACGAGTTAAGCGA                CGCT CTGA AGCG                 TTAATGACTCAGGCG  55 10
SH07_RS16785 NONE
SH07_RS16790 3405708 .. 3405724 +  -7.9  -3.17212   TTGCACCACTATCAA              CCACGGC AAC GCCGTAG              TTGCTCCCATAATGC  61 281
SH07_RS16805 NONE
SH07_RS16810 NONE
SH07_RS16815 NONE
SH07_RS16820 NONE
SH07_RS16825 NONE
SH07_RS16830 3412512 .. 3412543 + -16.6    -3.794   CGGCGTTAGGAAAGA      TGCCGGATGCGGCG TGAA CGCCTTATCCGGCA       TTTAATAAATTACAG 100 32
SH07_RS16865 3422813 .. 3422830 + -11.3  -3.23216   GCGATAACGTAGAAA             GGCTTCC CGAA GGAAGCC              TTGATGATCATAAAC  84 45
SH07_RS16875 3425798 .. 3425822 +  -7.1  -2.74192   ACATCCGGCAACCCT          TGACGCGGT TTAAATT GCCGCGTCG          TCCTCTTCACCGGTA  59 61
SH07_RS16905 3436108 .. 3436123 +  -3.2  -4.10552   AATCCGTCGAGGATT              GCGC TTTTTTCT GCGC               TTTAATTTCCTGGCG  58 39
SH07_RS16920 NONE
SH07_RS16925 3438805 .. 3438834 + -12.9  -3.11999   TTTATAGTTATTAAA       GGTGCGTCCGACTG GTT CAC-CGGACGCACC       TTAAGTACGTTTCCT  95 170
SH07_RS16940 3439294 .. 3439330 + -10.9  -4.56597   AATTAAAGTTAAAAA    GTAAAACCCCCGTTC CTTACCA GTTCGGGGGTTTTAC    TTTTTAAAGAGAACG 100 71
SH07_RS17005 3450891 .. 3450911 +  -3.9  -4.08216   AATGCCAGCAGCACC            CGATGCG GCAGTCG CGCTTCG            TTTTCCGCCACATCC  60 137
SH07_RS17015 NONE
SH07_RS17020 3453147 .. 3453172 +  -3.2  -4.82901   CTTTGTCGACAAGTT         AAATGCCGGG TTTAAT CCCGACATTA          TTTTTATCCAGCCAC  68 47
SH07_RS17030 3454757 .. 3454780 + -16.8  -3.22884   TATTAACGAAAAAAA          GCGGAAGAGG TCGC CCTCTTCCGC           TTAGTAACTTGCTAC 100 35
SH07_RS17040 3456195 .. 3456220 + -14.7   -3.0169   AATTTGCGGGGAAAT         GCCGGATGGCA GAGT TGCCACCCGGC          TGATTTATCAGGCTT 100 40
SH07_RS17055 3457898 .. 3457918 + -14.7  -4.50976   TCTCTTTAATCTTAC            CGGGGCGCA TCT TGTGCCCCG            TTTTCTCCTCTGCGA 100 32
SH07_RS17060 NONE
SH07_RS17065 NONE
        pssA 3462826 .. 3462842 +  -9.4  -5.04249   ATCCTGTAATCACAA              CCCCGT CCTGT ACGGGG              TTTGTTTTTTGGAGG 100 32
SH07_RS17075 3463403 .. 3463417 +  -4.3  -3.32022   GGAACATCTCAGCCT               TCAGT ATTCC ACTGA               TTGATGTATAAAAAC  51 240
SH07_RS17125 3475641 .. 3475660 + -10.7   -5.9218   ACCTGAAACACAAAA            CGGCAGC CCTTGA GCTGCCG             TTTTTTTATTCTGTC 100 46
SH07_RS17130 NONE
SH07_RS17135 3476258 .. 3476273 + -11.8   -5.4505   TGAGTGTATCGCCAA              CGCGCC TTCG GGCGCG               TTTTTTGTTGACAGC 100 51
        pheA 3477650 .. 3477677 + -18.6  -2.67428   CAACCTGATGAAAAG        GTGCCGGATGAT GTGA ATCATCCGGCAC         TGGATTATTACTGGC 100 33
SH07_RS17155 NONE
SH07_RS17160 NONE
SH07_RS17165 NONE
SH07_RS17170 3482868 .. 3482889 +  -7.1  -3.62224   CAAACAGATAAAAAA           GGGCCAGCC AATT GGCCAGCCC            TTCTTAACAGGATGT  68 49
SH07_RS17200 3487548 .. 3487565 +  -2.7  -3.64192   CGTTGATCATTATTC             TGATCAT CATG GTGGTCA              TTTCAGCCTATTTTT  50 83
SH07_RS17205 3488804 .. 3488829 + -14.7   -2.6563   GCGGAGTAACGAAAA         CGGCCCGGCAT TCGC ATGCAGGGCCG          TGAATTATTACGAAA 100 32
        ppnK 3490486 .. 3490505 +  -2.2  -2.56601   TATAAAACCAGTTTA            TACTGT ACACAATA ACAGTA             ATGGTTTTTCATACA  39 65
SH07_RS17225 NONE
SH07_RS17230 3492703 .. 3492742 + -12.4  -3.70444   AAAGTTGCTCTCAAA  GACGTTAAAAAAGGTGCTC AAT GAGCACCTTTTTTC-TGTC  TGTTATTTATTCGCT 100 45
        smpB 3494308 .. 3494319 +  -4.4  -3.60792   GGCGCTCATAAATCT                GGTA TACT TACC                 TTTACACATTGGGGC  54 218
SH07_RS17250 3496144 .. 3496169 + -16.3  -3.86897   GTCGGATAAAATATT         TATCAGCCCAG CTCT CTGGGCTGATA          TTTCTAAAAGATCGC 100 32
SH07_RS17260 3497645 .. 3497675 +  -3.3  -2.66695   GGAGTGTAAACATCC      TGCTATTTCCGCCA TTAA TAGCGGAA-TAGCC       ATATTTGCTAAACAA  42 77
SH07_RS17265 3499201 .. 3499217 +  -3.7   -2.7035   CAGTTCGGATAAAAG              CTTGTCA TCT TGATAGG              TAATATATAGGTACA  44 95
SH07_RS17270 3500348 .. 3500369 + -10.9  -3.67296   CGACTTTGCTGCGTA           TACCACGCT TTAC AGCGTGGTG            TTTAACTACATCCTC  81 463
SH07_RS17290 NONE
SH07_RS17295 3506394 .. 3506417 + -16.8  -5.56372   GAACAATCCGATGAA          CGGCAGAACC TCGC GGTTCTGCCG           TTTTTGTTTTACTTT 100 327
SH07_RS17300 3507340 .. 3507363 +   -16  -4.88895   CCTATTATTCTCCGA          GCCCTGTCGC AAGT GCGGCAGGGC           TTTCTTTATTTGTTT 100 55
SH07_RS17305 3508337 .. 3508360 +  -4.6  -2.61582   TTACATCTGGCTTTT          GCAGAAATAA AAAA TAGTTTCTGC           GTTGTCCATACCCTG  48 139
SH07_RS17310 NONE
SH07_RS17315 NONE
SH07_RS17320 NONE
SH07_RS17325 3510378 .. 3510404 +  -8.6   -5.1471   TTCCCTACCATAACA         ACCCTGATTGCC TCC GGCGGTCGGGGG         TTTCTTTTTTCTCCT 100 51
SH07_RS17340 3513766 .. 3513781 + -10.4  -4.92363   TCTTGTAACGCATTT              GGCTCC AATT GGAGCC               TTTTTATGACTATTT 100 33
SH07_RS17345 NONE
SH07_RS17350 3515585 .. 3515600 +  -4.7   -3.6707   CAAATCTATTCGTTC              GCAGA ACACGG TCTGC               TTTGAGGTATTACAT  57 5
SH07_RS17355 NONE
SH07_RS17360 3516853 .. 3516868 + -10.4  -4.90869   CCTGGTAACATGAAA              GCCCAC AGAT GTGGGC               TTTTTCGTTGATGGT 100 359
SH07_RS17400 3526160 .. 3526181 +  -2.9  -4.45664   ATAGAAGGTGGTATC           CCTGGCTAT TAGC AAGGTCAGG            TTTTGATTCCATTCA  61 14
SH07_RS17405 NONE
SH07_RS17410 3527397 .. 3527424 + -15.7  -2.62386   TATAATTTAATGTTA        TATCTGCCCCG ATAAAA CGGGGCAGATA         ATATGTTTAGTTTAC 100 36
SH07_RS17415 NONE
SH07_RS17420 NONE
        gabD NONE
SH07_RS17430 3532783 .. 3532822 + -10.1  -3.53811   GGAGGCGACGCTGCG  CGTCTTGTCCGGCCT ACGGGGATCC AGGTCGGATAAGGCG   TTTACGCCGCATCCG  78 56
SH07_RS17435 NONE
SH07_RS17440 3535101 .. 3535123 + -10.6  -4.63184   AATACGCAACACTTG           CCCCGGATAA ATT TTATCCGGGC           TTTTTAGCATCGGTT 100 53
SH07_RS17455 3536251 .. 3536261 +  -3.2  -3.54935   TATTGTCCGTAAGGA                 GTCA CTA TGGC                 TTTGACAACCATTTC  49 29
SH07_RS17460 3536948 .. 3536965 +  -6.2  -5.00616   GGTGAATTTATATTT             CGCCGG ACGCGG CTGGCG              TTTTTTACCAGCGCG  83 192
SH07_RS17470 3538361 .. 3538383 + -19.2  -3.42283   CCTGACTCTTCTTTT           CGCGACTGGC ATC GCCAGTCGCG           TCTTTAACTGGCTTC 100 36
SH07_RS17480 3539244 .. 3539264 + -12.6  -4.89063   AATACGCGTCTTTGA            CCCCGAAG CCTGT CTTCGGGG            TTTCTTTTTGCCTGG 100 57
SH07_RS17485 NONE
        nrdI NONE
SH07_RS17495 NONE
SH07_RS17500 3543313 .. 3543337 +  -7.2  -5.15381   CTCTGTTGCATTATT          CGCCTGAA ACCACAATA TTCAGGCG          TTTTTTCGCTATCTT  90 140
SH07_RS17505 NONE
SH07_RS17510 3545821 .. 3545839 + -12.4  -3.31144   AAGTAACTCTGCACT             TGCCCGGT GAC GCCGGGCA             TTATCACCCTGCCAA  95 35
        proX 3546872 .. 3546901 +  -9.9   -2.6914   AGTAATTTTTATTCG       GGCGGATAAGGCG TTTT TGCCGCATCCGCC        GTTCTGTGCACAATG  71 36
SH07_RS17520 NONE
SH07_RS17525 NONE
SH07_RS17530 NONE
SH07_RS17535 3550085 .. 3550108 + -12.5  -4.56597   AAAGAAAAAATGACT          GGCCAGCAT CGCAAC ATGCTGGCC           TTTTTGGCAAGCAGG 100 73
SH07_RS17540 NONE
        emrB 3552902 .. 3552921 + -12.2   -5.1848   ACTAAGTACAACTAA            GCCAGTTC ATTT GAACTGGC             TTTTTTCAATTAATT 100 36
SH07_RS17610 3560975 .. 3560990 +  -3.2   -3.6692   TTCTGAAAAGACAGT              TGGCAA AGGT TCGCCA               TATTTTCGCGTCGCC  51 165
SH07_RS17630 3562899 .. 3562931 +  -4.4  -4.40572   TATGTTCTGTTGAAG     CAATT-ATACTGTAT GCTC ATACAGTATCAAGTG      TTTTGTAGAAATTGT  63 165
        srlA NONE
        srlE NONE
SH07_RS17655 NONE
SH07_RS17660 3567567 .. 3567584 +  -5.5  -3.27475   GACAGTCGATCAATG             TCACCGG CGGT CAGGTGA              TGTTCTGATCAACAG  55 0
SH07_RS17665 NONE
        srlR NONE
SH07_RS17675 3569866 .. 3569903 +  -4.9  -3.55444   TTAATCCTTCAATCC  CAGACGTTTCGCCAGCC GATGCA GGTTGGCG-A-CGTCGG   TTTCCAGCATCCGCG  55 37
SH07_RS17685 NONE
SH07_RS17690 3574162 .. 3574207 +   -12  -3.53811   GATGCGACGCTGGCG CGTCTTATCCGACCTACG GGGACGCATG TGTAGGCCGGATAAGGCG TTTACGCCGCATCCG  91 66
SH07_RS17710 NONE
SH07_RS17715 3581975 .. 3581985 +  -6.8  -4.14243   GCAGTTCACGGATAG                 CGAC GAT GTCG                 TTTTCCGGTGCGCTA  70 510
SH07_RS17760 3589621 .. 3589650 +  -5.8  -3.61398   TGAATTTCGTCGCCG       TGTCGACG-TGTC ATTTC GACATCATCGACA       TTATTCACCGCAGGG  61 512
        hypA NONE
SH07_RS17775 NONE
SH07_RS17780 NONE
SH07_RS17785 NONE
SH07_RS17790 3593380 .. 3593396 + -13.7  -3.72576   AGTCAATGACCTTTT              GCACCGC TTT GCGGTGC              TTTCCTGGAAGAACA 100 65
SH07_RS17795 3595501 .. 3595526 + -14.8  -2.77701   GATTTAACTGCAAAT         TGCCGGACAG ATCTGC CTGTCCGGCA          TACTATTCATGAGGT 100 34
SH07_RS17805 3598737 .. 3598763 + -11.7  -3.01924   CTGGTGTAATAACAA         TTCCCGATAGT CTTTT GCTATCGGGAA         TATTAACGACAACTG  83 32
SH07_RS17810 3599708 .. 3599734 +  -4.2  -3.58536   ACAGACCAAAACTCG         CTGGCGGCTGGC ACT GGCAATCGCCCG         TTTCACCGTGACTTT  53 241
SH07_RS17820 NONE
SH07_RS17825 3602625 .. 3602636 +  -3.6  -5.40072   AAATCTGGCAACTTC                GGTG ATGA CGCC                 TTTTTTTCACGAGCC  80 73
SH07_RS17830 NONE
SH07_RS17835 3604126 .. 3604143 + -11.3  -2.56095   CGTACCCATACATCC             CCCCATC TACG GATGGGG              TAGGTTAACTATAAC  79 63
SH07_RS17840 3605554 .. 3605573 + -12.2  -4.77165   TGACCTTAATAAAAA            GGTCCGAT GGGC ATCGGACC             TTTTATTGTGCACAG 100 38
SH07_RS17905 3616713 .. 3616748 +   -14  -2.65264   GTTTGAAAATGGGAG    CTGGGAGTTCTACCGC AGAG GCGGGGGAACTCCAAG     TGATATCCATCATCG  95 44
SH07_RS17965 NONE
SH07_RS17970 NONE
SH07_RS17975 NONE
SH07_RS17980 3633923 .. 3633937 +  -7.1  -3.30124   TTCAGCGCCTGATGC               GACGC TTGAC GCGTC               TTATCAGGCCTACAA  64 101
SH07_RS18010 NONE
SH07_RS18015 3642500 .. 3642523 +  -6.6  -2.52795   AACATACCTGAATGG          TTATCCCCGC TGAC GCGGGGAACA           TAAGTTCGACAACTT  55 75
SH07_RS18025 NONE
SH07_RS18030 3645675 .. 3645694 + -13.6  -4.66609   CTCAACCATAAAAAA            TGCCAGCC CGGA GGCTGGCA             TTTTTAAATCAGATA 100 41
SH07_RS18070 3657080 .. 3657111 + -10.9  -4.67943   GCGTTTAGCATCAGT      CTCAAACCGGCTC CAGATA GAGCCGGTTTTGG       TTTTCTGTCTTAACG 100 216
        queF 3665284 .. 3665310 +    -3   -2.5805   ATAAATTTTTTCTCA         ATTTTGCGTG CTGGATT CACGCAGAAG         GTTGTGAAAGGTCAT  42 37
SH07_RS18120 3666759 .. 3666780 + -10.1  -4.72556   CGTAATCTCCGCTCC           CCCGGTGAC GTTT GTTGCCGGG            TTTTCTCGTTTTTGG 100 36
SH07_RS18125 3668603 .. 3668622 + -12.8  -3.27786   CAGCTAAGTCCTTTC            GCGCCGCT TTCG GGCGGCGC             TTCCTCCGTTTTAAC 100 34
SH07_RS18130 3670032 .. 3670050 + -12.4  -3.08774   TAATCGCTCTCCAAA             GGCCTCGT TTT GCGAGGCC             TCTTCCCGATTTCTC  93 38
SH07_RS18135 3670892 .. 3670923 + -14.4  -3.32844   GGTACGGTAACGGCG      AGCCGGATACGCCG CAAA CGTCGTATCCGGCA       TTATCACATCAGCGC 100 31
SH07_RS18150 NONE
        fucI 3676500 .. 3676527 + -12.9  -3.01791   ACAAGCAAGAGTGGT        TAGCCGGATAA GCAATG TTATCCGGCTA         TATTGCAGGAGCGAT  95 90
SH07_RS18160 NONE
SH07_RS18165 3678400 .. 3678418 + -13.1  -2.60212   AATCTCATACCGGTA             CGCCCGC ATGAC GCGGGCG             GTTATCGAATGATGG  91 39
SH07_RS18170 3679190 .. 3679211 +  -8.6  -3.21993   ACGGAAAGGGTAGCA           GGCCGGAG ACGACG CCCCGGCC            TTGCCTGTTATCGCT  67 40
SH07_RS18195 NONE
SH07_RS18200 3684070 .. 3684107 + -14.9  -3.92542   GGTTTAAGCACAGAA   CCGGGTCGGATAAGACG TTCG CGTCTCATCCGACCTGA    TTGTTTAACCCTGAC 100 34
SH07_RS18215 NONE
SH07_RS18220 NONE
SH07_RS18225 3686769 .. 3686782 +  -8.1  -6.02919   CAACCAATTATTGAA               CACCC TAAC GGGTG                TTTTTTTGTTTCTGG 100 35
SH07_RS18235 3689660 .. 3689704 + -12.9  -3.37761   GGTAAGCGATGAAAA TCGTCGGATGCGACATGCG TAACACT CGTACGTCGCATCCGGCAA TTACGTTTATTCCCG 100 36
SH07_RS18300 NONE
SH07_RS18305 3708695 .. 3708710 +  -2.5   -5.0917   TACACTGCGAATATT              CGGCA CATAAT TGCTG               TTTGTTTTTTAATCA  73 61
SH07_RS18310 NONE
SH07_RS18315 3710231 .. 3710248 +  -2.6  -4.13945   GTACGCTCTCCTGCG             GGAGGG CGTACT CACTCC              TTTTACCCTCACAGT  57 47
SH07_RS18320 3710569 .. 3710595 +  -7.3  -2.81421   ATTGAACGTTAACAA         ATAAGGTCAGC ATCCG GCTGGCCTTAA         GATTTTTCTCTTTCC  59 29
         tas 3711715 .. 3711742 + -12.8  -3.13403   ATCCGGCACCATAAG        ATTAACGCCGGT TAAA ACCGGCGTTAAA         TATTAATGACGGCGC  95 27
SH07_RS18340 3716745 .. 3716779 +  -9.3  -3.28791   CCAGTAATTCTTCGA    TGGTCTGGCGACGG CGAATCAA CCG-CGCCTGACCA     TTATCAAACAGAACT  69 64
SH07_RS18350 3719434 .. 3719447 +  -2.3  -3.94811   GTGCAACGTGACTCA               ATGGC ATCC GCCAC                TTTATGCATCGTATT  54 427
SH07_RS18380 3726162 .. 3726199 + -16.7   -4.8083   AGCTAATATCAGTTG   TGG-ATGGTTCAAAATTG CTA CAATTTTGAACCATTCCA   TTTTTCATAATATTC 100 35
SH07_RS18385 3727279 .. 3727304 + -11.3  -4.42386   ATCATACTCTGTTTA         TACGGGCATTT ATTG AAATGTCCGTA          TTTTATAAATAGGCC 100 60
SH07_RS18390 NONE
SH07_RS18395 3729351 .. 3729365 +  -2.8  -4.62069   AGGAATTTTTTTAAC               GGAATC CTT GGTTTC               TTTTTCGAGTCCGAA  68 514
SH07_RS18405 3730177 .. 3730192 +  -2.6  -3.96327   ATATTAGTAAAACAA              CTAATG ATGT TATTAG               TTTGTAGTGAACAGT  54 83
SH07_RS18410 3730859 .. 3730896 + -11.5  -2.75614   ATCATTTGGTTAAAT   TTGCTGGTTATAGTG CAGTTAAC CACTATAACCAGCAC    CTCTTATGTTTTCTT  81 49
SH07_RS18415 NONE
SH07_RS18420 3732956 .. 3732981 +  -9.1   -3.6187   CCAAATAAATCATAA         CGAGATACTTT TATA ATAGTATCTCG          TTCCTTTCATTCAAT  75 49
SH07_RS18425 3733516 .. 3733529 +  -2.3   -6.0427   AGGCTTCAGCAAAAT               GAGCC TAAA GCCTC                TTTTTTTTATATAGT  90 50
SH07_RS18485 NONE
SH07_RS18490 NONE
SH07_RS18495 3743052 .. 3743073 + -15.9  -3.08471   CGAAGTAAAAGGATA           TCCGGCCTG AATT CAGGCCGGA            TTCACTGAGGTTATG 100 33
SH07_RS18505 3746535 .. 3746556 + -13.7  -3.24232   GTGAAATAACCCCTC           GGGCCGATC AGCT GGTCGGCCC            TCTATTTCCAGAGGC 100 32
SH07_RS18510 NONE
SH07_RS18515 3749069 .. 3749088 +   -15  -4.71482   ACTCTTCACTTATTC            CCCTCCGG TTCG CCGGAGGG             TTTTTGGAGTTTGCT 100 43
SH07_RS18520 NONE
SH07_RS18525 3751655 .. 3751682 + -10.5  -4.54727   TTTGTCATCAGTCTC        AGGCCGGGTGG GTAATA CCATCCGGCCA         TTTTCATTTAAGCCA 100 211
SH07_RS18540 3755052 .. 3755062 +  -3.2  -2.88544   CCTGGCAAGAGTGGT                 GCGA TTG TTGC                 TCTATCCCCCTAAAC  43 263
SH07_RS18545 3758219 .. 3758229 +  -2.4    -2.867   TCATTATCTGCTGGG                 CCGC GTG GAGG                 TGTAATCATGTTGAT  41 10
SH07_RS18550 3759576 .. 3759598 + -17.8  -3.05384   CATAAATGACAGATG           CCCTCTTCCC GCA GGGAAGAGGG           TTAAATAAGGAAAGA 100 36
SH07_RS18555 NONE
SH07_RS18560 3763272 .. 3763287 + -11.8  -3.73323   ATATAAATAATAAAT              GGCCGC TTCG GCGGCC               TGTTTCTCTGTTTGA  93 35
SH07_RS18565 NONE
SH07_RS18570 NONE
SH07_RS18575 3767570 .. 3767593 + -13.9  -4.41348   GGCAATCTAATAGAT          TCTCCGCGC CTTTCA GCGCGGAGA           TTTCTTTCAGAGAGG 100 31
SH07_RS18590 NONE
SH07_RS18595 NONE
SH07_RS18600 3772040 .. 3772056 +  -7.2  -3.35798   TTTACCTGTCGGCAT              CCGCTC AAAAC GGGCGG              TTGTCGATAAACGCT  64 47
SH07_RS18605 3772695 .. 3772712 +  -8.3  -3.31263   GCTTAAATAAAAAAA             CCCCGAC ATTT GCCGGGG              TTGTGAGCATAACGT  69 31
SH07_RS18635 3779459 .. 3779488 +  -8.5  -3.77188   TACGCCTGATCTCAC       TGACGGCTTAGCG CATA TGCTTTGCCGTCA        TCTTTATCTTTGCGT  75 32
        ygfZ 3781629 .. 3781646 +  -9.1  -3.50572   CCGCCGAGCACGAAG             CCGTGCC AGAT GGCATGG              TTGTATGGAATGCGT  71 285
SH07_RS18665 3784386 .. 3784396 +  -8.2  -2.67244   CGCGTCCAGGCTCGC                 CGCC GCT GGCG                 TGCATTTCGGTATAA  59 234
SH07_RS18710 3795226 .. 3795242 +  -5.1  -2.92618   GTTACAGCCTGCGGC              GGCATCT CGG AGATTCC              CTTCTTATCTGGCAC  52 234
SH07_RS18715 3796210 .. 3796232 + -13.4  -3.66908   GAAGGGATAAAAAAA           CGGGCAAGTC AGT GACCTGCCCG           TTGATTTTCAGAGAA 100 370
SH07_RS18735 3799735 .. 3799757 +  -8.5  -3.45434   TAATCCATCAAATAA           TGCCTGATA GCACA TATCAGGCG           TTGTCCTCACTTCTT  71 38
SH07_RS18740 NONE
SH07_RS18745 NONE
SH07_RS18750 NONE
SH07_RS18755 3805536 .. 3805555 +  -5.6  -4.11216   CACCGTCAGAAAATG            TCCGCGCT CCAC GGCGCTGA             TTTTGGCCATAAAAC  65 205
SH07_RS18830 3821882 .. 3821913 +  -8.6  -3.16323   CGGGTGCCGAACGTA      GGTCGGATAAGGCG TTCA CGCCGCATCCGACA       TTAATGGCACGTTTT  67 160
SH07_RS18850 3825481 .. 3825491 +  -8.2  -4.36914   GCTTTTTATTTAAGC                 CGCG CGC CGCG                 TTTTATACCCCACAA  82 28
SH07_RS18860 3826959 .. 3826977 + -11.7  -5.48213   TCACCTGCGTTCAAA             GGCCAGC CTCGC GCTGGCC             TTTTTCTTTTGGATA 100 48
SH07_RS18865 3828779 .. 3828791 +  -4.7  -3.07787   GCTTCCTCCCATCGC                GGAGG AAG CCACC                TCTTGCAGTCATCTT  51 50
SH07_RS18870 NONE
SH07_RS18875 3830178 .. 3830200 +  -4.7  -4.71061   TACCCCACGCGTACA           ACCGCGTGG GGAGA CGACGCGGA           TTTTTAACTATGCGT  71 73
SH07_RS18880 NONE
SH07_RS18885 3831941 .. 3831981 +  -2.3  -5.00616   TCGTTGAGACTCTGA  GTGACAGCGCCCTTCTTTC CAC GCATACTGGGCGCTGTTGC  TTTTTTGAACCAGGA  68 62
SH07_RS18890 NONE
SH07_RS18895 3833094 .. 3833125 + -11.6  -3.17475   TGGCAGCGGCTATAG      GTCTGATAAGACGC GTTA GCGTCGCATCAGAC       ATTTATTGCCTTTGT  84 127
SH07_RS18905 NONE
SH07_RS18910 3835445 .. 3835474 +  -2.9  -3.21416   ATGCTGCTGCCAGGG       CTGTGGATGGCGTT ATG AATGCCGTA-ACAG       TTAATGATGACGGTC  44 8
SH07_RS18915 NONE
SH07_RS18920 NONE
SH07_RS18925 3837541 .. 3837572 + -11.6  -2.60392   TGGCAGCGGTTGTAG      GTCTGATAAGACGC GCAA GCGTCGCATCAGAC       GTTGATTGCCGGATG  80 87
SH07_RS18960 3843125 .. 3843136 +  -3.6  -3.55761   TACAGCAGTTACGCA                CTGG CGCG CCGG                 TTTAGCGCGTGAGTC  51 9
SH07_RS18965 3843450 .. 3843473 +  -8.9  -3.05384   TAAAAAATAAAAACA          GT-GCCGGAG CACGC CTCCGGCAAC          TTGCATAAAAACAAA  68 31
        mltC 3844732 .. 3844747 +  -2.5  -4.57569   GAATCCCATCATCTC              GCACG GTCAAA TGTGC               TTTTTCAAACACTCA  61 169
SH07_RS18975 3846053 .. 3846092 + -15.2  -3.81146   AGCCACTAATTACGC  AAAGAAAAACGGGTCGCC AGAA GGTGACCCGTTTTTTTTA   TTCTTACTTCAACAC 100 32
SH07_RS18985 3849314 .. 3849327 +  -3.7  -3.65351   TGCCGCTTTCCGCCG               CCTGG ACCG CCTGG                TTTGCCTGACAATGC  53 3
SH07_RS18990 3849532 .. 3849548 + -10.8  -5.10154   ACTAATTCTTAAGAA              CCCGCC CACAA GGCGGG              TTTTTGCTTTTGGAT 100 40
SH07_RS19025 3858629 .. 3858671 +   -13  -3.54424   TAAGACAGAATAATG TAAATGAAGCCGGATGAT ATTAACG ATCATCCGGCTTTATTGA TTTACGAGACTAACA 100 133
SH07_RS19060 3868176 .. 3868195 +  -2.9  -3.33151   CGCCCCAATGCGTTC            CA-GCATG TTATT CATGCCTG            TATTGGTTTCGAGGA  47 89
SH07_RS19070 3870306 .. 3870317 +  -2.2   -2.7186   AATGGCGAAGAAACG                GTCT AAAT AGGC                 TGATTCAAGGCATTT  40 61
SH07_RS19090 3873913 .. 3873935 +  -9.1  -4.08692   AGTCAAAAATGGAAA           TGCCCGATC GCCAG GACCGGGCA           TTTTCAGGAAGGTTA  83 39
SH07_RS19105 3878753 .. 3878766 +  -8.1  -3.30124   CACAATGCCTGATGC               GACGC TGCC GCGTC                TTATCAGGCCTACGA  66 109
SH07_RS19165 3888127 .. 3888141 +  -2.8   -3.1811   ACGTCAGATGGATAA               TGACGT ACC ACATCA               GTTTGTTATCCGGGA  45 139
SH07_RS19175 3889628 .. 3889654 + -14.5  -2.86539   TTTAGGTTAAAAAAA         TGCCCGGTTGT GAAAA GCAACCGGGCA         TCATTGTGAATTCAC 100 31
SH07_RS19195 3892526 .. 3892546 +  -3.3  -3.29459   TTGGACAATTTTGCA            GACATTTTA TTG TGAAAAGTC            TTAAATTGTTGCGTC  47 52
SH07_RS19200 3893309 .. 3893334 + -14.8   -3.5486   CCTGACGATTTTCCC         CGTTCCCGGT TGCTGT ACCGGGAACG          TATTTAATTCCCCTG 100 36
SH07_RS19215 3895655 .. 3895678 + -16.8  -3.25823   TTAAGTTCACAACAC          CTCACCGGAG CCTG CTCCGGTGAG           TTCATATAAAGGAGG 100 86
        dkgA 3896539 .. 3896567 + -10.9  -3.05775   TAACATGCAAATTCT        CCCGGTGGCGGTA ATG TTCCGCTACCGGA        CTTTTCAGAAATCAT  79 38
SH07_RS19225 NONE
SH07_RS19230 3897967 .. 3897998 +  -8.7   -5.0538   GCAGAATGATAAAAA      AATCCCCGGTAGC GTGTCA GTTGCCGGGGATA       TTTTTTAACGTCCAA 100 32
SH07_RS19280 NONE
SH07_RS19285 3910918 .. 3910949 + -14.6  -4.30576   CTGGTAACTTCTCTG      TCTATGAGAGCCGT TAAA ACGACTCTCATAGA       TTTTACTAATAGCAA 100 34
SH07_RS19295 NONE
SH07_RS19300 3912544 .. 3912568 + -14.3  -3.66578   TTAATCCTGCCTTGT          TTGCCCGGCCA TCC TGACCGGGCAA          TGTTCTTTCCTTTAA 100 37
        tolC NONE
SH07_RS19335 NONE
SH07_RS19340 NONE
SH07_RS19345 3920664 .. 3920691 + -14.2  -3.67558   GTTGAATAAGCCACG        ATACCGGATGGC ACTC GCCATCCGGTAA         TTGTTAGCCTATCTG 100 32
SH07_RS19355 3922414 .. 3922434 +  -9.8  -3.31322   AAAACAACATCAGAA            GTTGTCCA GCGCA TGGACAAC            TTCTGCCAGCTTCAC  76 40
SH07_RS19370 3924222 .. 3924260 +  -4.9  -4.24397   ACATTCGTCTTTAAT  GCACTGTAAATTATGA ATTAATCC TC-TAATTTATAGTGC   TTTCTATTACCTTAT  66 41
SH07_RS19375 3925047 .. 3925070 + -12.4  -2.72379   TTACGAGTAATCGCA          TTTGGCCGGG TTCG CCCGGCCACA           TCATTAACGGATTAA  88 31
SH07_RS19380 NONE
SH07_RS19385 NONE
SH07_RS19390 NONE
SH07_RS19395 NONE
SH07_RS19400 3930794 .. 3930809 + -11.8  -3.53164   ATACAAACACTAAAA              CGGGCC ATCA GGCCCG               TTATATCAGTGCTCT  91 47
SH07_RS19410 NONE
SH07_RS19415 3933620 .. 3933642 +  -8.4   -5.4251   CTCTTCCAGGAATAA           TCCCTGGC CCAAAAA GCCGGGGA           TTTTTTATATCTGCG 100 44
SH07_RS19420 NONE
SH07_RS19425 3934826 .. 3934843 +  -7.7  -3.23979   TCACCACGTTTACGC             GCTG-CCG CTA CGGCCAGC             TTCAGTTCCTCTTCG  61 522
SH07_RS19450 NONE
SH07_RS19455 3942272 .. 3942303 +   -13  -2.60392   CAACGACAGTTGTAG      GCCTGATAAGACGC GCAA GCGTCGCATCAGGC       GTTGATTGCCGGATG  91 92
SH07_RS19470 3944714 .. 3944728 +  -5.7  -2.63479   GACCGTTCCCCAACT               CCCAT ATTCC ATGGG               TCATATCGCGCTCTT  47 352
SH07_RS19480 3946434 .. 3946444 +  -2.4  -3.29144   AAAATCTGTCTCACA                 CCCG GAG CGCG                 TTATGAAAAAGATCC  45 9
SH07_RS19485 3947059 .. 3947078 +  -9.3  -4.57073   TCAAATAACCCTCCC            GGAGAGG CTCACC CCTCTCC             TTTTTCGCAGGCATA  95 33
SH07_RS19490 3948738 .. 3948763 +  -3.9    -5.243   GTACAAAATTCCGGA         CGC-GCGTAGAA CAC TTCGCCGCGGCG         TTTTTTCATCATTTC  84 201
        rpsU 3950119 .. 3950145 + -10.9  -4.40882   AGTTGTAGTTGTAAG        GCCGTGC-TTCC GAAA GGAATGCGCGGC         TTATTTTCGTTTATG 100 73
        dnaG 3952027 .. 3952039 +  -4.8  -3.28269   CGTAATTATCGTTGG                CGGT AAACA ACCG                TTGGATTTCAGCGTT  53 125
SH07_RS19510 3954019 .. 3954037 + -11.7  -5.24129   GGCCCTCTGCACAAA             CGCCACC TTTTC GGTGGCG             TTTTTTATCGCCCAC 100 81
SH07_RS19520 3954760 .. 3954781 + -14.5  -5.71295   ACCAGATATAGCAAA           GGCTGACGA GAAA TCGTCAGCC            TTTTTCTTTTTATAT 100 37
SH07_RS19530 3956646 .. 3956675 + -11.3  -3.57144   TTAATGCAGTACCGT       CACCGCGTCTTCC AGTC GGCTGGCGCGGTG        TTTCACCATCGCCGA  89 194
SH07_RS19540 3959954 .. 3959986 + -12.8  -4.82901   AGAAGCGTAATATCA      AATCGGATGGCGAT ACGAC GTCGCCATCCGATC      TTTTTATACGACGCG 100 31
SH07_RS19550 3961533 .. 3961571 + -12.6  -2.64766   CCGTTAAATCCCCTT  ACA-CACTGTCCGGCAA TCGTTT TTGCCGGACAGTGCTGC   CGTTTATTTTCGTGA  88 34
        ebgA NONE
        ebgC NONE
SH07_RS19565 3966769 .. 3966800 + -11.1  -3.05274   AAAAATGAGCAGGCA      TTTTCCCTCTTCCT GGATG AGGA-GAGGGAAAA      TAGTTTCTGCCTTTA  79 52
SH07_RS19570 NONE
SH07_RS19575 3970336 .. 3970347 +  -7.2  -3.30243   ACTGCTGGCGGATGC                GGCG TAAA CGCC                 TTATCCGCCCTACAT  64 47
SH07_RS19580 3972767 .. 3972801 + -10.6  -2.50816   GATTTAAATCGTTAT     TTGAAGCGCCGGATGC AAC GCATCCGGCACGTCGC     GTTAATCAATAAACA  73 34
SH07_RS19605 NONE
SH07_RS19610 3976297 .. 3976311 +  -2.8  -2.87564   AGCATGGCTGTCCGG               CGCA GAAATAA TGCG               TATCTGCGCACGTCG  42 15
SH07_RS19615 3977530 .. 3977549 + -10.8  -5.56673   CCGGGCAACCCGAAA            GGAATACG CAGA CGTATTCC             TTTTTTGTTGTAAGT 100 183
SH07_RS19620 3978773 .. 3978787 +  -5.7  -5.30189   CCAAACGGGGCGAGG               GGACT GACCG AGTCC               TTTTTTGATGTTGTC  86 178
SH07_RS19625 3980272 .. 3980296 + -14.3  -4.44974   TAATTAATTGTTTAA          CCCCTTTCGTC TAC GGCGGAAGGGG          TTTTCTCAACTTTAA 100 34
SH07_RS19645 3985629 .. 3985646 + -12.7   -4.7497   TAGTTTCCCTTCAAA             GCCGCCT TCTC AGGCGGC              TTTTTCATCACTGCG 100 57
SH07_RS19650 3986517 .. 3986536 + -10.7   -4.0942   GAAATTCCTGTCCGA            CAGGCGC TGCAAT GCGCCTG             TTTGTCTCGTCGGTA  93 39
SH07_RS19655 NONE
SH07_RS19660 3987961 .. 3987986 + -11.9   -2.6914   CTGTCTATGATTAAT         GAGGCGGTGGT TAAC ACTACCGCTTC          GTTGTCTGGACAATC  83 89
SH07_RS19665 NONE
SH07_RS19670 NONE
SH07_RS19675 NONE
SH07_RS19680 3989461 .. 3989479 + -12.4  -3.37071   GGTTAACTTCCCTCT             GGCCGGAG CCA TTCCGGCC             TTATCCCTCAAATTT  95 35
SH07_RS19685 3990057 .. 3990074 + -11.3  -4.87626   CTTAACGATAAAAAA             CGAGGAG GAAG CTCCTCG              TTTTTGCTATTGGAG 100 53
SH07_RS19690 3991091 .. 3991108 + -11.3   -2.8664   CTTCGGTTAAAAAAA             GGCACCT TACG AGGTGCC              TCTGATAATTAGCTA  81 31
SH07_RS19695 3991758 .. 3991780 + -10.6  -4.60977   AAAACAAATCTGCTC           GCCGGATG TCTGACT CATCCGGC           TTTTATCATTATGTT 100 39
SH07_RS19700 3992353 .. 3992370 + -12.7  -5.07486   ATTAATCTTAGAATT             GGGGCGA TATT TCGCCCC              TTTTTATTAACAATA 100 36
SH07_RS19710 NONE
SH07_RS19715 3994301 .. 3994312 +  -7.2  -3.30124   CAGGTTGCCGGATGC                GGCG AAAA CGCC                 TTATCCGGCCTACAA  64 44
SH07_RS19775 4008004 .. 4008018 +  -4.2  -3.59402   TTTTGATCGGCGTAG               GCCACA GAA TGTTGC               TTCGTTTACTGTAAC  54 157
SH07_RS19780 4008643 .. 4008657 +  -2.9  -5.23396   CTTTTTTTCACCCGA               TCATT TTAAT AATGA               TTTTTATTGATTATT  73 1
SH07_RS19785 4010236 .. 4010249 +  -9.5  -4.65895   CTCCAAAAGTAAAAA               CCCGC CGAA GCGGG                TTTTTACGTAAAACA 100 385
        garD 4017154 .. 4017171 +    -7  -5.38549   ACGTCCCTCGCAAAA             CATGGC CTTAGT GCCATG              TTTTTATTGTTTAAA  89 52
SH07_RS19815 NONE
SH07_RS19820 4018180 .. 4018198 +  -4.4   -3.1505   TTCGCAGTCCTTCCA             GGCTATCC GCA GGAATGCC             TTCATCAACAATGAT  49 130
SH07_RS19830 NONE
SH07_RS19835 NONE
SH07_RS19840 NONE
SH07_RS19845 4021918 .. 4021941 +  -3.2  -5.12987   TTTGCTCCTTTATTG          GGCCTTCAC TTCCCCC GT-AAGGCC          TTTCTTTTTCTTTCG  75 44
SH07_RS19850 NONE
        kbaY 4024309 .. 4024330 + -10.9  -2.56596   ATTTATCCCAATGTA           CTTCCCGAT TAAT ATCGGGGAG            TGCCTTAATGGAAAA  76 57
SH07_RS19860 NONE
SH07_RS19865 NONE
SH07_RS19870 4026551 .. 4026575 +   -10  -3.90856   TTTTGTAAATGGAAC          GAGGCACTGC GTCTG GTGGTGCCTC          TTTACTTAAGGAATT  86 33
SH07_RS19875 4027376 .. 4027419 +  -2.5  -4.22524   AAATAACATTTGACT GGGTTGAACATAACGCC GATAGCAAAA GGAGTTATGTTCAACAA TTTAATTTTAGATAT  57 102
SH07_RS19880 4028292 .. 4028321 + -19.5  -4.50241   ACCGTTAATACGTTA       GGGCGTTATCTGA CCTG TCAGATAACGCCC        TTTTCCTTCCTCTTT 100 33
SH07_RS19885 NONE
SH07_RS19890 NONE
SH07_RS19895 4032810 .. 4032826 +  -6.5  -5.00616   ACGCCGTGAATTTCT              GCGGC CAGCGCC GCCGC              TTTTTTCAGCGGCAG  83 129
SH07_RS19905 NONE
SH07_RS19910 NONE
SH07_RS19915 NONE
SH07_RS19920 4037282 .. 4037296 +  -7.1  -3.30124   TGTAATGCCTGATGC               GACGC TTGCC GCGTC               TTATCAGGCCTACAA  64 49
SH07_RS19935 4040028 .. 4040038 +  -8.2   -5.4833   CGGCCCACTCATCTG                 CGCG TGG CGCG                 TTTTTTCTTCCGTCA 100 287
SH07_RS19945 4040878 .. 4040889 +  -4.4  -2.87132   ACATAGCCAATGACC                TGAC CTTC GTCA                 TCTGTCGCCACCAGC  47 361
SH07_RS19960 NONE
SH07_RS19965 4043676 .. 4043696 +  -6.3  -3.18264   AACAACTTTAACTAC            TCTTTAATG CAG TATTAAAGA            TTAATCGGTAACAAA  57 60
SH07_RS19970 4045108 .. 4045118 +  -2.4  -4.07568   TGGCGGGGCAAAGGT                 CAGC AAT GCCG                 TTTTCAAGCGGCCCA  56 404
SH07_RS19980 4046228 .. 4046241 +  -6.7  -2.72344   TTTTACAGATTGTGT               TCGCT GTTC AGCGA                TGATTACGCATCACC  56 9
SH07_RS20035 4060266 .. 4060286 +  -8.9  -3.25356   GTAATTCGACATCAA            CCCTGCCCT TCA GGGGTGGGG            TTACCTTGCTTATCC  71 37
SH07_RS20075 4068443 .. 4068470 + -13.6  -3.25946   CACGCTCTGTTCGTT        GATAAAAGGCCGC ATA GCGGCCTTTT-TC        CTTTCTTTACAATAC 100 111
SH07_RS20085 4070839 .. 4070862 +  -8.2  -3.36327   CATCAGGCTGATTTG          GCGTTTATCA TCAG TGATTAACGC           TTGTAAATGAACTCA  69 194
SH07_RS20110 4074969 .. 4074987 +   -16   -2.7386   AATCCCCTCCCCTCA             TCCCGCGC AGC GCGCGGGA             TGGTTCCAGTAAGTT 100 39
SH07_RS20115 4075777 .. 4075792 +  -5.4  -3.68351   GGCACATGCATAAAG              CGGTTT TCAA AGACCG               TTTCGGTGATAAACC  58 341
SH07_RS20155 NONE
SH07_RS20160 NONE
SH07_RS20165 NONE
SH07_RS20170 NONE
SH07_RS20175 NONE
SH07_RS20180 NONE
SH07_RS20185 NONE
SH07_RS20190 4086763 .. 4086787 + -12.9  -2.95459   TAGCATGTGCATGGC          GGTCTGTTGTG CGG CACAACGGGCC          ATTTGTACGGTTAAT  95 54
SH07_RS20195 4087355 .. 4087369 +  -2.1  -3.28712   GTAGTTATTCGGTAA               TGTCT CTTTT AGACG               TTGTGAGGAGAAACA  45 37
SH07_RS20200 NONE
SH07_RS20205 4088500 .. 4088521 + -10.3  -2.75963   CTTTAATTCTGGTTT           TGATGAAGA TTAA TCTTCATCA            CTTTGACATACAACT  75 13
SH07_RS20210 4089515 .. 4089525 +  -5.4  -4.22748   GAAATTCTTCTCGGC                 TGAC TCA GTCA                 TTTCATTTCTTCATG  65 182
SH07_RS20220 NONE
SH07_RS20225 4091570 .. 4091601 +  -2.3  -4.40358   GTCTACTTGTGATAA      C-AATGCCGGACAG GAGTA CTATCAGGCATTCG      TTTTATACGATCGGT  58 29
SH07_RS20230 4092893 .. 4092919 + -12.4  -3.53444   ATTTCAGCGGTTTCG         AATTCTGCAGAC AGT GTCTGCAGAATC         TTTAAAACGAACTAA 100 40
SH07_RS20265 4100174 .. 4100200 + -15.3  -3.23853   AAGTCATTAAAAAGA         CAAAACAGGCC GCCTG GGCCTGTTTTG         TATTACTTCACAACG 100 39
SH07_RS20295 4104524 .. 4104542 + -12.4  -2.83517   ACTAATTTATTTTTC             GGGCGCAG CCA TTGCGCCC             TCCTCTTCTCTCCCT  89 36
SH07_RS20300 4106044 .. 4106073 + -10.7  -3.11192   CGTTAATGTCGTAAA       CCGGGCATCAGGC TTAC GTGTGATGTCCGG        TTAACTCGTGGTATG  79 35
SH07_RS20305 4107214 .. 4107231 +  -9.1  -5.55769   GCTCAAAACAAAAAA             CCGGAGT CTGT GCTCCGG              TTTTTTATTATCCGC 100 48
SH07_RS20315 4109100 .. 4109130 +  -8.2  -3.30039   CCAGGAGCTTTAATC       TCTGCCCCGTCGTT TCT GACGGCGGGGAAAA       TGTTGCTTATCCCTC  69 28
SH07_RS20320 4109753 .. 4109769 + -15.1  -5.78622   TTGTCCGACGATATT              GCCCCCG GTT CGGGGGC              TTTTTTTTGCGCTAA 100 53
SH07_RS20345 4114567 .. 4114581 +  -4.2  -3.90744   CTGGCCCACGCCAAC               CGGCAA ACT TTGCCC               TTCTTTACCGCAGAC  58 219
SH07_RS20385 4125498 .. 4125514 + -10.9  -2.57985   CTTCCACCAGGCTTT              GAACCAG CAG CTGGTTC              TCCGTTCGCTTCTCA  69 216
SH07_RS20395 4128623 .. 4128643 +  -6.7  -2.78696   TATGTTGCTTTGCCT            GGGCGACGC TAC GCTTAGCCC            CTTACTTATTTCTGG  57 266
SH07_RS20405 NONE
SH07_RS20410 4128943 .. 4128961 +    -3  -2.98381   CTTACGTTATAAGAA             GTTCCGTC GAT GATGGCGC             TAATTTCGTGAATTG  44 13
SH07_RS20415 NONE
SH07_RS20420 4131210 .. 4131226 + -13.7   -5.5112   GCTAAAGCGTCAAAA              GGCCGGA TTT TCCGGCC              TTTTTTATTACTGGG 100 45
SH07_RS20425 NONE
        panF NONE
        prmA 4134121 .. 4134135 +  -6.4  -3.86202   CCATCTCAGAGGATT               GGTCAA AGT TTGGCC               TTTCATCTCGTGCAA  65 271
SH07_RS20440 NONE
         fis 4135521 .. 4135546 +  -8.2  -5.29782   ATGCTTGATTAAAAA         GGCGCTACTC GGCATG GGGAAGCGCC          TTTTTTATAGGTGTC 100 55
SH07_RS20450 4136475 .. 4136485 +  -3.2  -2.94202   AAAGGATGTGTAAGC                 CTGG TTT TCAG                 ATTATTCATTTCGTG  44 39
SH07_RS20455 4136738 .. 4136762 +  -5.2  -4.13911   GAATTTACATGACAC          TTAATTCATT CGTTT GATGAATTAA          TTTCGTTATGTTTTC  65 39
SH07_RS20465 NONE
SH07_RS20470 4142072 .. 4142095 +  -8.2   -3.9392   GATAAATCAGAAACA          TAAAGGCGCT TTCG GGTGCCTTTA           TTATTTCCAGTGAAA  77 36
SH07_RS20475 4142543 .. 4142562 + -12.8  -4.59773   CGAAATAACTGAACA            GGGCGCGG AGTT CCGCGCTC             TTTTTAACGATACAG 100 33
SH07_RS20480 4142985 .. 4143008 +  -6.6  -2.75481   AAAAGATGATGATAG          CCACACTGGC TGCC GCCAGCGTGC           TGCTTGCCGTTGCAA  57 73
SH07_RS20485 4144007 .. 4144028 + -13.7  -3.07233   TCGGTGTGAGGTAAC           GAGCGTCGC TACG GCGGCGCTC            TCTTCAGCGTTATGC 100 42
SH07_RS20490 4145215 .. 4145225 +  -2.4  -2.71731   GAATATCTATAACCG                 CCGC ATC GCGA                 TCGTTGAACGCTAAG  40 1
SH07_RS20495 NONE
SH07_RS20500 4147145 .. 4147164 + -13.6  -3.83214   TTCGAAAAGCAAAAA            GGCCATCC TTTC GGATGGCC             TTTCGCTTGATTTGA 100 52
SH07_RS20540 4154101 .. 4154111 +  -3.2  -3.96327   CACCATGCCAGAAAA                 GGAG TTT TTCC                 TTTCTGATAGAACAT  55 412
SH07_RS20575 NONE
         fmt 4159101 .. 4159119 +    -8  -5.01535   TAGTCCACTCTTCTA             AGCCCGGT CTT GCCGGGCG             TTTTTATACTTATGA  95 41
SH07_RS20585 4160440 .. 4160454 +  -3.6  -3.35679   ATAACGGGTCGCGAC               TGATGA AAA TTATCA               TTCTGGGTGCCGGCC  49 45
        trkA 4161820 .. 4161847 + -15.8  -3.89938   CTTTCTTCTTGTAAT        TAATAAGGCGTC TAAT GACGCCTTATTA         TTTCCCTTTGATTAT 100 27
        mscL 4162517 .. 4162535 +  -3.2  -3.06686   TAAGGGATCATGTAG             TAATGC TTCTATC GCATTA             TCCTTTATCTGCCCT  43 184
SH07_RS20765 NONE
SH07_RS20770 4182235 .. 4182257 +    -4  -3.26947   CAACAGTCACGCCCC           TGCGCCATCG TCA CGGTGAGGCA           TTCATATGAGAATTC  51 7
SH07_RS20775 4183720 .. 4183741 +  -4.3  -2.61106   TATGCGCGTCGCCAG           TGCCACGCT GGAG AGCGAAGCA            TGAATTATCGCTATC  45 1
SH07_RS20780 NONE
SH07_RS20785 NONE
SH07_RS20790 NONE
SH07_RS20795 NONE
SH07_RS20800 NONE
SH07_RS20805 NONE
SH07_RS20810 NONE
SH07_RS20815 NONE
SH07_RS20820 4190192 .. 4190219 +    -7  -3.25102   CCTTCTTCGCGGATC        TGTGCTTGCAGA TAAT TTTGCAGGCCCA         TCTTCTGAATCAGAT  61 73
SH07_RS20885 4201788 .. 4201816 + -14.7  -2.85763   ACATTATTGAGGCGT        AAAAAAAGCGGGG ATT CCCCGCTTTTTTG        TCACTTTTTCGGTAT 100 31
SH07_RS20910 NONE
SH07_RS20915 NONE
SH07_RS20920 NONE
SH07_RS20925 4209431 .. 4209449 +  -6.7  -3.38046   GGCAGAGAGATCAAC            CGCACGCG CAAC CGC-TGCG             TCTTTCAGGTCGCGA  59 173
SH07_RS20935 NONE
SH07_RS20940 4210688 .. 4210712 + -16.5  -4.86731   TTAATCCCGTCGGAG          TGGCGCGTTAC CTG GTAGCGCGCCA          TTTTGTTTCCCCCGA 100 37
SH07_RS20945 4212852 .. 4212876 +  -4.2  -3.45571   TAAGGCATTCACGCC          GCATCCGACA TCTTT TGCCTGATGC          TTCGTATTTACGCCC  52 60
SH07_RS20975 4217681 .. 4217708 + -10.5  -4.43213   CTCATTAATTGCTCA        TGCCGGACGGC ACTATC GTCGTCCGGCC         TTTTCCTCTCTTCCC 100 33
SH07_RS20980 NONE
        nirD 4220810 .. 4220830 +  -8.9  -4.68994   CGGTTAATGTTTTAA            CGGGAGGCG CAA TGCCTCCCC            TTTTTGCATGGTCCT 100 34
SH07_RS20990 4221719 .. 4221729 +  -2.4  -3.39895   TTTAATCAAACTGAA                 ACGG CTG CCGG                 TTAATTACTAAGGGG  45 11
        cysG 4223135 .. 4223152 + -11.3  -3.74762   CATTAATTTAACCCG             GGCCAGA GAAT TCTGGCC              TTCTTAATGACTCTT  95 35
SH07_RS21000 4223579 .. 4223606 + -10.6  -4.65722   CCGGTTTAATTGCCC        GACGCCCTCTGGA TTT TCC-GAGGGCGTA        TTTGTTTCTATGTCC 100 65
        frlA NONE
        frlB 4226222 .. 4226243 + -12.9  -3.53343   AATATTAATCCCTCT           CCCGGCCCG GCAA CGGGCCGGA            TTTACGCAAGGAGTT 100 33
SH07_RS21015 NONE
SH07_RS21020 4227883 .. 4227910 + -16.4  -2.80699   GCCTGGTAGGTATAA        CGTTGGCGTGAG CATC TTCACGCCAACG         TGCTGTTACTTGCCG 100 32
SH07_RS21025 4228720 .. 4228762 + -14.9   -4.1899   TAACCGTAGGCCGGA TAAGATGCGCCAGCATCGC ATCCG GCGATGCTGGCGCGTTGAA TTTTACATCCCGTAC 100 38
        mrcA 4249355 .. 4249368 +  -9.5  -4.37711   TGTTCTGATTAAAAA               GGCGC TTCG GCGCC                TTTTCAGTTTGCTGA  88 33
SH07_RS21140 4252533 .. 4252567 +   -18  -3.39142   TTATCGAATAACACG     TTTGCGCGGCAGGTTA TGC TACCCTGTCGCGCAAA     TTGCTTCACTCTGGA 100 30
SH07_RS21145 NONE
SH07_RS21150 NONE
        hslO 4254585 .. 4254608 + -16.8  -4.12188   TCATTAATGAGTATG          TCCGGCAGAG AGGG CTCTGCCGGA           TTTTACGACTAATAC 100 34
SH07_RS21170 4258413 .. 4258434 +   -13  -4.46835   TTATAGAAAGCAAAA           CGGGAGGC ACCTTC GCCTCCCG            TTTATTTACCCTTCT 100 74
        greB 4261231 .. 4261245 +  -3.5  -4.56775   AGAGTCTTAACCTCC               TGCCG ATGGC TGGCA               TTTTTGCCAGCCAGT  65 44
SH07_RS21190 4263730 .. 4263750 + -15.5  -5.06414   TGCCTGACATAAAAG            TGCCGGAGA ATA TCTCCGGCA            TTTTTATTCCACAGC 100 125
        feoA 4264296 .. 4264308 +  -4.1   -3.1478   GGCCTTATTAGAAGT                GGAAG CGG TTTCC                TGTTAATACGGTGAT  49 7
        feoB 4266645 .. 4266656 +  -5.8  -3.29013   GCACCACCGGTGATT                GCCA TTAA TGGC                 TTCACTTATTCAGGT  57 18
SH07_RS21205 4266915 .. 4266939 + -12.2  -5.08824   CGCCTGTTTTGGAAA         GCCCGGTATGC GTCT GCAT-CCGGGC          TTTTTTGCGTGCGGC 100 52
SH07_RS21210 4267957 .. 4267983 + -10.8  -2.71712   AGAAGAGTTGGCTGC         GGCGAGTCAGTA AAG TTCTGTCTCGCC         ATTTCAAAAGCCACC  76 13
SH07_RS21220 NONE
SH07_RS21225 4270145 .. 4270178 +  -8.7  -2.53581   CCCTCTTTTGTAGAT     TGCCCGATGCGACGC TAAA GCGTCATTTCGGGCC      TACGTTGAACATGTG  65 47
SH07_RS21230 4272009 .. 4272021 +  -3.3  -4.93296   AAGCGTTGCGGAAAG                CTTGC GTC GCCAG                TTTTTATACTGGTAA  74 235
SH07_RS21245 4280013 .. 4280040 +  -3.5  -3.78026   GCACTGACGCGCTTT        TCACCGA-CG ACAAAAAAG CGTTCGGTGA        TATTTTCACTTTCGA  56 324
SH07_RS21260 4284284 .. 4284296 +  -6.9  -5.12068   GCTCCGCCACTTTGC                GGGCG ATG CGCTC                TTTTTCTTCGGTCTG  90 519
        glpD NONE
SH07_RS21320 4299674 .. 4299704 +  -3.1  -3.69323   TGGAACGCAATCATC       CCAACGATGGCAC CGACA GTGCCGAGGATGG       TTTCCATCATGGTCC  51 110
SH07_RS21350 4305559 .. 4305583 + -10.1  -2.90723   TGAAGTAAGATAGTG          CCCTTTTTCTG AGA TGGAAAAAGGG          TGTCATTCAAAATCG  73 33
SH07_RS21355 NONE
SH07_RS21360 4307584 .. 4307597 +  -2.3  -3.05384   GAAAATCATTGATAT               GGCCA TGAA TGGCG                TTGGATGCCGGGCAA  42 230
SH07_RS21365 4308460 .. 4308473 +  -5.3  -2.76322   TTTAGAATTTTACCC               GAATC ATAA GATTC                TGATATCTTAAATAA  50 380
SH07_RS21370 4309425 .. 4309437 +  -2.6  -3.53224   CCAGCCCGTAAACGT                TCGG TACGC CCGG                TTTGGCGGAGAAATC  47 482
SH07_RS21380 4311356 .. 4311387 + -16.6  -4.17556   CAGATGCAATCCACA      CCCCAGCGCAGCAAC TCT GCTGC-GCGCTGGGG      TTTATTGACGGTATA 100 73
SH07_RS21440 NONE
SH07_RS21445 4322453 .. 4322471 + -10.3   -2.5785   ATATTAGCAATTTGG             CGGCAAC CCAAA GTTGCCG             ATTAATGATTACTTC  74 54
        rsmD NONE
SH07_RS21480 4329294 .. 4329304 +  -8.2  -3.61268   GTCTGCTCCATTCCT                 CCGC TTT GCGG                 TTTGAAGCTTGCCTC  69 146
SH07_RS21490 4330313 .. 4330332 + -12.2  -3.01984   TCTGATAAAACTTGA            CTCTGGAG TCGA CTCCAGAG             TGTATCCTTCGGTTA  86 36
        zntA NONE
SH07_RS21505 NONE
SH07_RS21510 4334455 .. 4334482 + -13.4  -5.52384   TTTAAGATGATGAGG        CGGCCTCAGGGA CGTG TTCCGGAGGCCG         TTTTTTTAATCGCCA 100 43
SH07_RS21520 NONE
SH07_RS21525 4337527 .. 4337554 +  -7.1  -3.91984   CAGAACAGGTAATCA        GTATGACGAAT ACTTAA AATCGTCATAC         TTATTTCCGCCATCT  72 71
SH07_RS21530 NONE
SH07_RS21535 NONE
        nikC NONE
        nikD NONE
        nikE NONE
SH07_RS21555 4343044 .. 4343055 +    -3  -3.68064   AAAATCTTCAATTCA                TTGT GACC ACAA                 GTTTTTCTTCGCTTT  51 155
SH07_RS21560 NONE
SH07_RS21565 4347792 .. 4347803 +  -2.2  -3.17763   GATAGAAAAAGATAG                CCTT TATG GAGG                 TTCCTGCAATGTCAA  43 110
SH07_RS21570 NONE
SH07_RS21575 4349556 .. 4349597 + -10.3  -3.81755   CTAAAATTCAATAAA TTGCACCGATGCGTAGTC CCTATAA GCTTACGCATCGG-GCAA TTGTATTTACGCCAT  86 142
SH07_RS21615 4359839 .. 4359866 +  -6.4  -5.07486   ACGTACCGGATAAAA        CCAGCGTTGAC CATTTGC GT-AACGCTGG        TTTTTCTTAGGCATC  84 46
SH07_RS21625 4363258 .. 4363279 + -13.7  -5.66684   TGTAATCAGTCTCGA           GCGGGTCAG TTTA CTGGCCCGC            TTTTTTTATGCGTTA 100 217
SH07_RS21635 4364497 .. 4364514 + -14.1  -4.77757   CGACGTGTTCCTGAA             CGCCCGC ATAT GCGGGCG              TTTTGCTTTTTGGCG 100 52
        tppB 4366273 .. 4366296 + -16.8  -4.67641   TATTCTTGCAGAAAG          CAGGGTAGCG TTAT CGCTACCCTG           TTTTAGTTTTACACT 100 42
SH07_RS21655 NONE
SH07_RS21660 4371585 .. 4371611 +   -16  -3.43217   GCGTTAAATGTTAAA         GGGCTAAGAGTA GTG TGCTCTTAGCCC         TTAATTACGTTTCCG 100 34
SH07_RS21670 4372048 .. 4372062 +  -7.1  -5.47218   CTGGAAAGTAAAAAA               CCGAC GCAAA GTCGG               TTTTTTTACATCCGG  95 159
SH07_RS21675 4372820 .. 4372841 +  -5.9  -4.36914   AAAAATTTAGCTAAA           CACATATGA ATTT TCAGATGTG            TTTTATCCGGGAGGC  70 39
SH07_RS21680 NONE
SH07_RS21685 4374646 .. 4374659 +  -8.1  -3.30124   ATTTATGTCGGATGC               GACGC TGGC GCGTC                TTATCCGACCTACAA  66 84
SH07_RS21690 4375996 .. 4376006 +  -5.4  -4.22748   GAAATTCTTCTCGGC                 TGAC TCA GTCA                 TTTCATTTCTTCATG  65 23
SH07_RS21700 4377642 .. 4377664 +  -2.8  -3.06183   ATAATACCATAATAT           TGATTATTAG CAC TTTATAATCA           TTGAATAAAAATAGA  43 29
SH07_RS21705 4378463 .. 4378493 + -12.7  -2.55015   AATAACACCACCGAA       AGATGCAGATGCT TTCTC AGCATCTGCATCA       TGCATTACATCAAAT  86 36
SH07_RS21710 4379632 .. 4379645 +  -2.3  -2.62184   CAGCAATACGGCTGG               GGTCG AGTC CGACG                TGATCTAAAGACAGC  38 519
SH07_RS21730 4381509 .. 4381543 + -15.9  -3.26545   TACCCCGGTTGTCAC     CCGGATCATAGTCAC TTGAT GTGACTATGATCCGA     TTAATACTCTCTCCG 100 42
SH07_RS21735 4382981 .. 4382999 +  -3.1  -6.02345   AATGCTGGCAGGAAC             TGTTGGC AGAAC GGCAACA             TTTTTTTTGTCGTTG 100 188
SH07_RS21745 NONE
SH07_RS21750 4387464 .. 4387497 + -14.8  -3.78953   GTAACGTGTAAATGA     GAGTAAGGTTGAAC ATGAAG GTTCAGCCTTACTC      TTTCCTGCTAACCAT 100 37
        treF 4395170 .. 4395207 + -12.9  -3.52073   GGCGAACCATAATAT   TTTTACAGCCAGCCG CTAACTTC CTGCTGGCTGTAAAA    TTATCCTCTTCAGGA 100 29
SH07_RS21785 NONE
SH07_RS21790 4398367 .. 4398398 +   -13  -2.78596   CCTGGCTCCCCGTAG      GCCGGATAAGATGC GCCA GCATCGCATCCGGC       TATAATGCGCACATA  91 92
SH07_RS21795 4400184 .. 4400208 + -17.3  -3.45434   TCTAAATCTGTTTAA          TTGCCGGATGT CAG ACATCCGGCAA          TTATCATCACTTCTT 100 176
SH07_RS21810 NONE
SH07_RS21815 4404333 .. 4404368 +  -6.9  -3.26471   CAGCTCATCCATAAA    TACCTGATGGTTGTG CTAACT CATCACCATCAGGCA     TTACTGTGCAGGTGG  61 85
SH07_RS21870 NONE
SH07_RS21875 NONE
SH07_RS21880 4425278 .. 4425319 +   -11  -4.60797   TAGAGTCAAGATTAG CCCCCGTGGTGTTGTCAGGT GCAT ACCTG-CAACG-TGCGGGGG TTTTCTCTCTCCAGC 100 286
SH07_RS21895 4426960 .. 4426978 +  -7.3   -4.4715   AGCTGATTGAGTAAA             CCGGAGC GCATG GCCCCGG             TTTTGTGAGTTAACG  78 27
SH07_RS21920 4431159 .. 4431185 +    -5  -4.81249   TGCAGAATTTTCGTA         GGCCTGATAAGC GGA GCGCATCAGGCA         TTTTTGCCTTTGCCA  74 25
SH07_RS21955 NONE
SH07_RS21960 4439279 .. 4439301 + -11.3  -2.66695   TTACCCGCACAGCCA           TTCCCCAGC CGCGA GCTGGGGAG           ATCTTTGGTCAGCAC  73 88
SH07_RS21970 4442340 .. 4442367 + -14.3  -3.82481   CTGTAATCCCTTTCA        TGCCAGGTGAT GCAGAA ATCACCTGGCA         TTCTTCAGTTTTCCT 100 35
SH07_RS21975 4443423 .. 4443456 + -10.5   -4.2528   AGCCGCGACTGCGTA     GAGTAA-AGCCCGA TAATCGC TCGGGCTTTTACTC     TTTATTGGGTTGCAG 100 40
SH07_RS21985 4444919 .. 4444938 + -13.6  -4.08692   CTTTATTGCTGTTTA            CGGTCCTG ATGA CAGGACCG             TTTTCCAACCGATTA 100 52
SH07_RS21990 4445414 .. 4445433 + -11.4  -6.11392   GCACAGAATCTAAGA            TCCCTGCC ATTT GGCGGGGA             TTTTTTTATTTGTTT 100 54
SH07_RS22000 NONE
SH07_RS22005 4447416 .. 4447433 + -12.7  -3.44848   TTAGCGATAAAAAAA             GCCTGCC AGAT GGCAGGC              TATTTAATAACGGCG 100 268
SH07_RS22025 4452013 .. 4452038 + -11.9  -3.11619   GTGAGTTAAGTAAAA         GCCCGGTCA CATTGGAC TGACCGGGC          TTACGTGAGTTATTC  86 32
        xylF 4457044 .. 4457058 +  -4.2  -3.02144   CGTGTTGAGGCCAAC               GCCC ATAATGC GGGC               TGTTGCCCGGCATCC  46 515
        xylF 4458028 .. 4458056 + -12.4   -4.0641   AGCGAGCTGTAAGCG        TTACGCCCCAGC GCGGA GCGGGGGCGTGA        TTTCTCTCCATGCCG 100 29
SH07_RS22065 NONE
SH07_RS22070 4460819 .. 4460850 + -12.4   -4.7078   TTTGATAAAAATTTT      CTCAAAGCCGGTTA CGTA TTACCGGTTTTGAG       TTTTTGCATGATTCA 100 42
SH07_RS22075 4462114 .. 4462125 +  -7.2  -3.30124   GTGGTTGTCGGATGC                GGCG TGAA CGCC                 TTATCCGACCTACCC  64 81
        malS 4465434 .. 4465444 +  -2.4  -3.18912   GCAACAGTAACTTTT                 CCGG CTT CCCG                 TTCGTCAGTACCTCG  43 31
        avtA NONE
SH07_RS22095 4466977 .. 4467007 +  -9.1  -3.53444   CATAAACAAAGCGCA      C-TGTTCCGGCGTT GAGA AACGCCGGAAAACG       TTTCAAACAGGCTGC  73 11
SH07_RS22110 NONE
SH07_RS22115 4470172 .. 4470198 +  -5.2  -3.29144   TAACTATATTAATAA         TTCAGGTTGC TGCACAT GCGACTTGAA         TTATGACAGACATAG  55 86
SH07_RS22120 NONE
SH07_RS22125 4471960 .. 4471974 +  -2.8  -3.33696   CCGATCTCATCATCC               TCCCTT TGA AATGGA               TTAATTAAAAGGAAA  46 3
SH07_RS22130 NONE
SH07_RS22135 NONE
        sgbH NONE
SH07_RS22145 NONE
        araD 4477083 .. 4477119 + -10.8  -2.79796   CTCATTACGATCAAT    CATCGGGCTGTCGGTA ATCTC TTCCGGCAGCTCGCTG    TATCCTGCGCTCGCC  70 426
SH07_RS22160 4479363 .. 4479374 +  -2.2  -3.01001   TCAAGGTTATATTTT                GCTT CCGC GAGC                 TGTGCTTTCAGGCTG  42 521
SH07_RS22175 4480770 .. 4480781 +  -7.2  -3.30124   GTTTATGCCGGATGC                GGCG TGTA CGCC                 TTATCCGGCCTACGG  64 140
SH07_RS22205 4492219 .. 4492229 +  -3.2  -3.17763   ATAAAAAAAGATAGC                 CCTT GTG GAGG                 TTCCTGCAATGTCAA  46 27
SH07_RS22210 4493072 .. 4493082 +  -3.2  -2.56095   ATTGATAAGCTGAAG                 CGTT CAT AGCG                 TGAGTTGCCTATGCA  42 17
SH07_RS22215 4494009 .. 4494019 +  -6.8   -4.0162   AACATATGGGCCATC                 TGGG CAC CCCA                 TTTCTAATATGCAAG  69 211
SH07_RS22220 4494746 .. 4494763 +  -4.1  -3.97308   CCACCTGTTTATACA             GCATAAC TTTA GGTATGC              TTTCGTGTGTTTCAG  59 232
SH07_RS22225 4495721 .. 4495731 +  -3.2  -5.54192   TATATTAATAACTCA                 CTCT CCA GGAG                 TTTTTTTAACTTAGT  82 62
SH07_RS22240 4500099 .. 4500128 + -14.3  -3.38316   TCGTAAGTAATCCAA       TCCCACCCTCTCC ACAT GGAGAAGGTGGGG        TTAATTGCCTGATGC 100 31
SH07_RS22245 NONE
SH07_RS22250 4502441 .. 4502457 +  -2.9  -3.20494   AATTAATCAACGAAT              TGCGCAG TTT TTGAGCA              TGTTAATGATTACGT  44 408
SH07_RS22260 4503027 .. 4503052 + -14.1  -4.86731   GGATCAACAACCTAA         GGGCAATTCTC TGAT GAGGATTGCCC          TTTTCTTTACCAGAC 100 126
SH07_RS22265 NONE
SH07_RS22270 NONE
        lldD 4507090 .. 4507112 +   -12  -2.79302   CAATTTTCTGCTATC           CTGCCCCC GCACTAA GGGGGCAG           TATGCTAAACATCGT  83 199
SH07_RS22280 4507653 .. 4507670 +  -5.6  -3.18681   CATTAGATCCCATCC             CCATAC TCAAAT GTATGG              TTAATACCGTTGAAA  55 91
SH07_RS22315 NONE
SH07_RS22320 NONE
SH07_RS22325 4515323 .. 4515338 +  -3.4  -4.11235   ACCGACTCACTGACG              TATTAT GCAG ATAATA               TTTATATAATGATTG  58 389
        rfaD NONE
SH07_RS22355 NONE
SH07_RS22360 NONE
SH07_RS22365 4524120 .. 4524147 + -14.4  -2.89921   AAGAATAAACAAGTT        TAAGAAGTGAGT TAAA ACTCACTTCTTA         TCTATACAACTTAAT 100 39
SH07_RS22420 NONE
        coaD 4536206 .. 4536237 +  -7.2  -2.62043   GAAGTTAGCGTAGCG      TTTATGCCGGATGG TATG CCATCCGGCGCGCA       TGAATTACTTCTGGC  58 28
SH07_RS22450 NONE
SH07_RS22455 NONE
        slmA 4540993 .. 4541020 +  -9.8  -4.41348   CAGTTGCAGTAATAT        GACGCCGGATGA CTTT TCATCCGGCGAG         TTTCTTTAAACGCCA 100 29
SH07_RS22475 4543477 .. 4543500 +  -3.1  -5.06414   TTCCGCCTTCACAAA          TGCCGCCACT CAAAC AG-AGCGGCA          TTTTTCTTCCCCGCA  71 63
        dinD 4544675 .. 4544687 +  -4.9  -2.65354   AATAGCGATTTCACA                TAACT ACA AGTTA                TCAATTTCCCCTCCC  48 216
SH07_RS22485 4545411 .. 4545436 + -11.9  -3.89354   CAAAACCTGTGATCT         GCTGGGCAG CCAGCCAA CTGCCCAGC          TTCTTGATTTGCGCA 100 45
         gmk 4547982 .. 4547995 +  -3.1  -3.41913   CATGCCCAGTCATTT               CTTCA CCTG TGGAG                CTTTTTAAGTATGGC  49 56
        rpoZ 4548288 .. 4548298 +  -2.4  -2.83082   CGTCGTTAATCACAA                 AGCG GGT CGCC                 CTTGTATCTGTTTGA  41 32
SH07_RS22505 NONE
SH07_RS22510 NONE
SH07_RS22515 4553330 .. 4553351 + -11.5  -3.21912   GCATTTGTCTTTGTT           GCGGCGGCA CTTC TACCGCCGC            TTCATCGGTTAACCG  84 164
SH07_RS22525 4556316 .. 4556336 +  -2.6  -2.72511   GATTGCGCGTAAATC            GTGCATAA CTCCC TTATGTGC            ATTTCACGGGATGGA  41 105
SH07_RS22530 4558077 .. 4558105 + -14.5  -3.08312   GGTAAACATCAATCT        CGCCGGGTACGAC TCA GACGTACCCGGCA        TTCCATCAATAGATT 100 36
SH07_RS22545 NONE
SH07_RS22550 4562813 .. 4562827 +  -3.6   -5.0133   CGACTGGTACTTATT               TGTAAC TCA GTTATA               TTTTTTCGCCCGGTG  73 367
SH07_RS22555 NONE
SH07_RS22560 4565097 .. 4565109 +  -4.1  -3.91072   CCAGGCACCGCGCCA                CCGTT AAA AATGG                TTTCTGCCGCTTTAG  59 51
SH07_RS22570 NONE
SH07_RS22575 4566441 .. 4566454 +  -2.3  -4.45765   GACCAACGCTTCTTT               ACCTG ATAT CAGGA                TTTCTTCATTTTCAC  60 58
SH07_RS22595 4571902 .. 4571920 +    -3  -3.64812   AAGGTGCCTTTAATA             CCATCGGC AGC GCCAATCG             CTTTTTTAGGTACAA  51 297
SH07_RS22635 NONE
SH07_RS22640 NONE
SH07_RS22645 4579565 .. 4579586 + -17.3  -4.79451   TCAAGTCGCACCAAA           GGGGAGCGG GAAA CCGCTCCCC            TTTTATATTTAGCGT 100 48
        emrD 4581019 .. 4581056 +  -5.6  -3.89346   TAAGCGCACGTCACC   GCAGCATCGTCATC AGCTCCATGG GAGAACGATGCTGC    TTTATCAGATCACGC  63 38
SH07_RS22670 4582812 .. 4582822 +  -5.4  -5.31275   AGCGGGCATTATCGT                 CAGA ACT TCTG                 TTTTTTCTCCTCCAC  84 73
SH07_RS22685 4587132 .. 4587155 +  -3.8  -4.08216   CATCCAGAATAGCTT          TGGCGACCGAG GCG CTCGGTA-CCG          TTTTCGACAACGTAA  60 81
SH07_RS22705 4590604 .. 4590618 +  -3.4   -3.0701   TGGCGTAAGAGAGCG               CCGCCG CAC CGCTGG               TTGGATGAAGATTAT  43 114
SH07_RS22725 4594368 .. 4594401 + -13.1   -4.0098   GTAAAGGTTAAACGT     CGCTGCACGACGCCAC GCG GTGGCG-CGGGCAGGG     TTGTTTCCGTTCCGC 100 433
SH07_RS22735 4596670 .. 4596684 +  -5.6  -4.07568   TGGAGATCAGCAAGC               CGCAGA TAA TCGGCG               TTTTACGCGCAAAGC  65 354
SH07_RS22765 4601995 .. 4602039 +   -10  -3.34013   GCAGTAAACCAATAA TCAGTAAGCGGGCAAAC-GCG TTTA TGCTGTTTGCCCGCCCACAGA TTAATTCAGCACATA  76 26
        dnaA NONE
SH07_RS22795 NONE
        recF NONE
        gyrB 4603568 .. 4603591 -  -3.1  -3.30124   TCGTAGGCCTGATAA          GCGTAGCGCA TCAGG CACGCT-CGC          ATGGTTAGCGCCATT  47 39
SH07_RS22780 NONE
SH07_RS22775 4602931 .. 4602958 -    -4  -4.19258   ACACCCGAGGGAAAA        GGGGGATGCAAC GCGC GTTGCGTGCTCC         CTTTTTGCTTAGCGG  61 34
SH07_RS22770 4601992 .. 4602042 - -16.4  -3.57418   TATGCAGTAAACCAA TAATCAGTAAGCGGGCAAAC-GC GTTTAT GCTGTTTGCCCGCCCACAGATTA ATTCAGCACATACTT 100 23
SH07_RS22760 NONE
SH07_RS22755 NONE
SH07_RS22750 NONE
SH07_RS22745 NONE
SH07_RS22740 4596262 .. 4596283 -  -9.4  -4.87807   GCAAGATAGTAAAAA           GCCGATGC CTGACC GCACCGGC            TTTAAGAAAGTGGAT  95 80
SH07_RS22730 4593872 .. 4593926 -  -9.5  -3.24232   TGTTCCGCAAAGACA GC-TCGGTGCGCTCGCGCGTTGA AAAAAGCGAAG CCAACGCGCAAGC-CACCAATGC GGTTATTCCACCGGC  67 61
SH07_RS22720 4592827 .. 4592856 -  -2.1  -3.25169   CTAAGAAGCGAGTAA       GTACCTGCAAATC CGAA GATTCGCATATGC        TCCCTGACGGCGAGC  45 78
SH07_RS22715 4592333 .. 4592353 - -14.7  -5.82172   AGTAAGACAAAAAAA            GCCCCACCA GAA TGGCGGGGC            AAAGAGAATAGCTAG 100 41
SH07_RS22710 4590470 .. 4590504 - -11.5  -3.10071   AAATGCCAGCGAATA    CCAGGTGGAGT-ACCA TTTA CGGCGACTCCACCCGG     AAAAGAGTTAACCGA  84 33
SH07_RS22700 NONE
SH07_RS22695 NONE
SH07_RS22690 4587037 .. 4587069 - -11.3  -3.90922   AGCCGTGCTAAAGAA      TACGGACCAGCACCC AAC GGATGCCAGTCCACA      CAATTAACGTAACTC 100 205
SH07_RS22680 NONE
SH07_RS22675 4582778 .. 4582804 -  -8.7  -3.64259   AAGCAGCCTGAATAA         TGCCCGCCG GGTGATCAT CAGCGGGCA         TTATCGTCAGAACTT  75 32
SH07_RS22665 NONE
SH07_RS22660 4581496 .. 4581512 -  -2.2  -2.80016   CTTCAGCATCAATGA              CCTGAC TTCCT GTCATG              CGACTCTCTCAATAA  41 21
SH07_RS22655 NONE
SH07_RS22630 4578738 .. 4578762 - -10.7  -4.98531   TGCTTAAACGAAAAA         CCCCGCCCGG TTTGCG CCG-GCGGGG          TTTTGGAATCGTGTG 100 53
SH07_RS22625 NONE
SH07_RS22620 4576653 .. 4576680 -  -7.1  -5.75342   GGCGGGTAAAAAAAA        TACGCGCTTACC TTAAC GATAAGCGCG-A        TGTTGTTCAAGCCTT 100 47
SH07_RS22615 NONE
SH07_RS22610 NONE
SH07_RS22605 4573083 .. 4573105 -  -2.7  -3.55444   GGGTTACTCCTGAAA           TGAATACCT GCGTG AGGCATGCA           TTGTAAAAATCAGCA  48 125
        uhpT 4571639 .. 4571657 - -13.1  -5.95946   GGAATAATAAAAAAA             GCCCGGC GTCAT GCCGGGC             AAAAGTCACCAGTTA 100 44
SH07_RS22590 4568302 .. 4568328 -  -2.4  -2.65264   GCATTATCCAGATCA         TGAGTTCT CCTGCGTAATC AGAACTCA         TGATATCTGGAAACC  40 52
SH07_RS22585 4567845 .. 4567861 -  -2.9  -3.97088   GCTGATAAGACGAAA              CGGTTTC AAT GCAACCA              GTGAACGCCCTCGGC  54 14
        nepI 4566412 .. 4566426 -  -2.8  -3.70773   CCGGATATGTAAGAA               CAGCAA CAA CTACTG               ACCAACGCTTCTTTA  50 48
SH07_RS22565 4564875 .. 4564886 -  -4.4  -3.48438   AAGGAGCACAATTAA                TTGG CGGT CCAA                 AAGCCAGCATTTTGA  53 214
SH07_RS22540 NONE
SH07_RS22535 4558075 .. 4558107 -  -9.7  -2.67021   GCGGTAAACATCAAT      CTCGCCGGGTACGAC TCA GACGTACCCGGCATT      CCATCAATAGATTAC  71 37
SH07_RS22520 4552908 .. 4552927 -   -10  -4.36914   TGCTGCTCTACAAAA            CGCCGCTT TCTA AAACGGCG             CAAATTCGCCTGCAA  90 458
        ligB 4545392 .. 4545402 -  -5.4  -3.33361   CACGAAGGACACTAA                 GGTT CAA AACC                 TGTGATCTGCTGGGC  55 11
         rph 4541708 .. 4541725 - -11.3  -6.06529   TACAGACAAAAAAAA             GGCGACT CATC AGTCGCC              TTAAAAATCAGTTTG 100 33
        pyrE 4540995 .. 4541018 - -16.8  -2.77523   GTTGCAGTAATATGA          CGCCGGATGA CTTT TCATCCGGCG           AGTTTCTTTAAACGC 100 33
SH07_RS22445 4537764 .. 4537777 -  -6.7   -4.2074   TCCCGAACAGACAAA               GATCC CGAA GGATC                GCGCATAGCGGGTTA  71 38
        rpmB NONE
        rpmG 4537099 .. 4537134 - -18.6  -2.90194   ATGGGGGCAAGCAGA    TAACAAAAAACCCCGC CGGA GCGAGGTTTTTTGTTA     CATCAAAGCGAGAAT 100 40
SH07_RS22430 4536171 .. 4536190 -  -7.2  -2.57132   TTCCTGCCGGAGAAT            GTCCATCAG GCG CTGATGG-C            GAAGTTAGCGTAGCG  58 77
SH07_RS22415 NONE
SH07_RS22410 NONE
SH07_RS22405 NONE
SH07_RS22400 4530053 .. 4530065 -  -6.3  -2.50307   GAAACTCTCATTAAT                TGAGT AAA ACTCA                CTGTTTTAACGGTTT  53 40
SH07_RS22395 NONE
SH07_RS22390 NONE
SH07_RS22385 NONE
SH07_RS22380 4526131 .. 4526146 -    -4  -3.04894   AACTCCGCTTAAAAC              TGTCCT GGTG AAGACA               TGTAATTGTGGGATT  47 45
SH07_RS22375 NONE
SH07_RS22370 4524119 .. 4524148 - -10.9  -2.50354   TAAGAATAAACAAGT       TTAAGAAGTGAGT TAAA ACTCACTTCTTAT        CTATACAACTTAATC  76 15
SH07_RS22345 4518651 .. 4518680 - -13.1  -4.99035   GCATTGATATAAAAA       GAAAAAATGATGC CAAA GCATCATTTTTCC        TATCTCAGTTGGTAT 100 70
SH07_RS22340 NONE
         tdh 4516192 .. 4516209 - -12.7  -4.53303   TATCCTCAGATAAAA             GGGCTGG AATA CCAGCCC              TTGTTCGTGTTAATC 100 35
SH07_RS22330 4514752 .. 4514772 -  -8.2  -4.59109   TACACCGCCGAAAAA            CGCTGTGC CTGAT GCACCGCG            TAATCCGTTCCGTGG  88 199
SH07_RS22310 NONE
SH07_RS22305 4510397 .. 4510409 -  -5.5  -4.25283   AGGGCGGCAGCAAAA                TGGAG TGT CCCCA                GAAGCTTATAACAAT  68 99
SH07_RS22300 NONE
SH07_RS22295 NONE
SH07_RS22290 4508489 .. 4508511 - -13.4  -2.90888   ACGATGAGATAATGA           CCGGCCCG TTCTGCG CGGGCCGG           GTCATAGCGGTAACA 100 55
        cysE 4507239 .. 4507258 -  -5.6  -3.40403   TGCCTGGGACGATAA            GCGCCTGCG CCG CGCGGG-GC            TGGACTATCACGAGT  54 407
SH07_RS22255 4502055 .. 4502073 -  -8.2  -4.10855   AAAAGCCTTTCAAAA             GTAAGCAA CGT CTGCTTAC             TGCCCCTCTACCTGC  79 22
SH07_RS22235 4497274 .. 4497289 -    -4  -3.41416   TTAAAACAATCAATA              GATCCA TAAT TAGATC               TCCGGGAACGTGGAA  52 19
SH07_RS22230 4496112 .. 4496124 -  -3.3  -3.30619   AATTAGTCCTTACAA                GGAGC AAA GTTCC                ATAATCTCCCCCCTC  47 45
SH07_RS22200 4487170 .. 4487192 -  -5.5  -3.14463   AACCTGGCTGATCAA           GGCCCTCTC ACACG GAGAAGGGC           GTTTAACATAACCAC  53 81
SH07_RS22195 NONE
SH07_RS22190 4483831 .. 4483857 -  -8.1  -5.13741   TTAATCTAATAAAAA         GCACATTGTAT TCATT AAACAATGTGC         TTTTTTTAAATTCAT  95 86
SH07_RS22185 4482540 .. 4482562 -  -6.2  -4.65838   GAGATAGTTGAAAAA           GCGGCTAACA ATT TGCCAGCCGT           TGTGGAAATGATGAT  77 40
SH07_RS22180 4480820 .. 4480833 -  -8.1   -3.4252   CCGTAGGCATGATAA               GACGC GTAA GCGTC                GCATCAGGCAATGAA  68 66
SH07_RS22170 NONE
SH07_RS22165 4478804 .. 4478856 - -11.4  -2.72043   AATGCTGCGTGAAAT TCGCCACCAGCTTGCTCA-GTCGCAG CAA CTGCGGCCTGAACAAGC-GGCGGAAA GCGAAGATTAATGAT  80 33
SH07_RS22155 4476683 .. 4476720 -  -7.6  -3.15861   TATTACGGGCAGTAA   TCCCTCACGCCGGGGC TTCATC GCCCCGGCACTACGAA    TTGATATGTTCCTTG  63 334
SH07_RS22105 NONE
SH07_RS22100 4466686 .. 4466698 -  -9.1  -3.54741   TATCAGCGCCTGAAA                GCACG CGG CGTGC                TGATGGTGCCGGGGC  71 337
SH07_RS22080 4462210 .. 4462239 - -19.5  -5.07011   GAGACAAAGTAAAAA       GCCTTATCCGACT GACA AGTCGGATAAGGC        TCAAGGAAATGCAAT 100 40
SH07_RS22055 4456412 .. 4456426 -  -6.4  -2.72973   TGAAAAAGGCAGAAT               CTCTCG GCG CGAAAG               TATTTGTACAGTCTG  51 167
SH07_RS22045 4454517 .. 4454545 -  -9.6  -5.40072   CGTTCCTTAAAAAAA       TGCCCGG-TATCG CTAC CGATAACCGGGCC        AACGGACTGCACAGT 100 47
SH07_RS22040 4453011 .. 4453034 -  -8.8  -2.75039   TATAGATGTGAATTA          TCCCCCACCC GGTC AGGCAGGGGA           TAACGTTTACGCCAT  67 32
SH07_RS22035 NONE
SH07_RS22030 4452013 .. 4452038 - -11.9  -4.43477   GTGAGTTAAGTAAAA         GCCCGGTCA CATTGGAC TGACCGGGC          TTACGTGAGTTATTC 100 35
SH07_RS22020 NONE
SH07_RS22015 NONE
        glyS 4447416 .. 4447433 - -12.7  -5.64274   TTAGCGATAAAAAAA             GCCTGCC AGAT GGCAGGC              TATTTAATAACGGCG 100 44
SH07_RS21995 4445544 .. 4445563 - -13.6   -3.3482   CAACGCCGTAAGTAA            GGCGGGAA TAAT TTCCCGCC             GAAGACTCTTACTCT 100 34
SH07_RS21980 4443430 .. 4443448 -  -7.4  -3.83205   ACTGCGTAGAGTAAA             GCCCGA TAATCGC TCGGGC             TTTTACTCTTTATTG  70 35
SH07_RS21965 4438871 .. 4438915 -    -2  -2.85657   TATAAAAGCGAATTA CTGGCGTGACTG-CATTCCGC TGGT GCGGGATGCCTATCTTGCCAA CGCGCAAAACTGGGT  41 295
SH07_RS21950 4437211 .. 4437225 -  -6.4  -4.56775   ATGCCTGGGGAAAAA               CGGCAT GAA ATGCCA               TCAGAACGGAATGAA  74 160
SH07_RS21945 4435821 .. 4435838 -  -8.4  -4.88129   AAAAAGCAGTAAAAA             GGGCCA GTTAAT TGGCCC              AAATTTTACGAGTCA 100 110
SH07_RS21940 4433819 .. 4433829 -  -6.8  -3.13164   GCGCCAATCACCGAA                 TGCG GGG CGCA                 TCTTACTGCGCAGAT  59 104
SH07_RS21935 4433711 .. 4433729 - -14.6   -5.1287   TGCAGATGCAAAAAA             GCCTGCTC GTT GAGCAGGC             TTTTCGAATTTGGTC 100 36
SH07_RS21930 4433004 .. 4433015 -  -4.4  -3.35679   CCTCGTGACCTACAA                TCTG TCAA CAGA                 ATGTGAAAACGTCAA  51 191
SH07_RS21925 4430974 .. 4431004 -  -3.9  -3.86897   TGTATTGCTCACAAA       TCAATTCCCGCCC TTATC GGACAGGGAATGA       AGTATTGCTGCCGGA  58 243
SH07_RS21915 NONE
SH07_RS21910 NONE
        dppD NONE
        dppF 4426960 .. 4426978 -  -9.5  -3.76402   AGCTGATTGAGTAAA             CCGGAGC GCATG GCCCCGG             TTTTGTGAGTTAACG  81 35
SH07_RS21890 NONE
SH07_RS21885 4425028 .. 4425053 -   -14  -5.00339   AGTAAGAACGAAAAA         GGCCGCAGAG TTTCCC CCCTGCGGCC          TGGTCCGGGCGCAAA 100 76
SH07_RS21865 4420264 .. 4420278 -  -4.3  -4.56729   ACGAAAAGACTAAAA               TCACA CGTCT TGTGA               CCTTCTAAATTGATT  66 248
SH07_RS21860 NONE
SH07_RS21855 NONE
        bcsA NONE
SH07_RS21845 NONE
SH07_RS21840 NONE
SH07_RS21835 NONE
SH07_RS21830 4407496 .. 4407517 -  -4.4   -4.7657   CAAAAAGGTTAAAAA           GTTTGAGC TGGCTC GCACAAAC            CAGCACTTTTTAAAG  71 63
SH07_RS21825 4405992 .. 4406020 -   -14  -4.52669   AAGAAGTGAAATAAA        CCTGAACTCACC CAGGT GGTAAGTTCAGG        CACAGGGGTCAATTA 100 91
SH07_RS21820 4404292 .. 4404321 - -11.5  -3.14487   CAGCATATGCAAAAG       GCTGGATAAAGTG TTAC CCCTCTATCCAGC        TCATCCATAAATACC  84 73
SH07_RS21805 4402339 .. 4402354 -  -5.4  -3.09004   CCAGGCGGAAAATGA              GGCAGCT TAT AGC-GCC              AGAACCGCCGTATTC  53 16
SH07_RS21800 4400046 .. 4400070 -  -8.5  -4.32048   TAATAAGAGTGAAAA          GCCTGATGCGC TAC GCTTATCAGGC          CTGAATTTCCATACA  82 170
SH07_RS21780 4395170 .. 4395207 - -12.9  -2.59447   GGCGAACCATAATAT   TTTTACAGCCAGCCG CTAACTTC CTGCTGGCTGTAAAA    TTATCCTCTTCAGGA  91 35
SH07_RS21770 4391681 .. 4391706 - -14.1  -5.08601   TTATCGTAATAAAAA         TCGCCCAAACA TTGC TGTTCGGGCGA          TCAAATTAATTATTG 100 35
SH07_RS21765 4390047 .. 4390085 - -16.1  -3.56142   GCGATTAATAAGCAA   CCGAATGCCCAGCTGTT TTTTT AAAGGCTGGGCATTCGG   TTTTTACAACGTTAT 100 45
SH07_RS21760 4388628 .. 4388643 -  -3.2  -4.62069   TTCTTAGCGCAAAAA              CTGCCA GATT TGGTAG               GACCAAAATTTATCC  65 293
SH07_RS21755 4387464 .. 4387497 - -12.6  -2.92667   GTAACGTGTAAATGA     GAGTAAGGTTGAAC ATGAAG GTTCAGCCTTACTC      TTTCCTGCTAACCAT  93 343
SH07_RS21740 4382361 .. 4382372 -    -3  -3.88618   AAGATAATCACGAAA                TGAT AAAA ATCA                 ATTCCCTGTCAGAGA  55 472
SH07_RS21725 4380249 .. 4380296 - -10.8  -3.00259   TATAGAGATTATATA TGAACAGG-AGGAATAGCTGCTT TTA AAGAAGATATTCCGGCCTGTTCA ATATGCAAGGAAGTA  79 62
        hdeB 4379843 .. 4379873 - -14.8  -4.93595   ATAAAAATGCAAAAA       GGAGCAGCAAGATG GCT CAACTTGCTACTCC       TTTTTACTTGCACCT 100 43
SH07_RS21715 4378970 .. 4378980 -  -5.4  -3.23853   TTCGCGCAAGCAACA                 TCAG GTT CTGA                 GCTGCATTGCGAATC  52 225
SH07_RS21695 4375873 .. 4375887 -   -10  -2.92026   GATTTCAATATGACA               GGACAG AAC CTGTCC               GGGTTCGTTCTAACC  68 245
SH07_RS21665 4371585 .. 4371611 - -13.8  -3.71649   GCGTTAAATGTTAAA         GGGCTAAGAGTA GTG TGCTCTTAGCCC         TTAATTACGTTTCCG 100 44
SH07_RS21650 NONE
SH07_RS21645 4366272 .. 4366297 - -13.3  -3.86346   TTATTCTTGCAGAAA         GCAGGGTAGCG TTAT CGCTACCCTGT          TTTAGTTTTACACTG 100 33
SH07_RS21630 4363085 .. 4363102 -  -8.3  -3.14218   TACGCACCAAAACGA             GCGGGTC AGCT GGCCCGC              TTCAGATTGTGACAT  67 233
SH07_RS21620 4359926 .. 4359939 -  -3.1  -5.37345   GTTAAGTATAAAAAA               CAGCA AAGT TACTG                TTTTTTTCAACCTGT  79 219
SH07_RS21610 4358573 .. 4358587 -  -2.9  -3.00046   TAAAAAACAACAGCA               TAAGA ATTAA TCTTA               GGATAAATTTTTATT  43 134
SH07_RS21605 NONE
SH07_RS21600 4356677 .. 4356713 -  -9.6  -3.60074   GAGAAAGTCCCTAAA    GATTGTAGAGGCGT CATCAGAAC ATGCCTCTACAATC    GATTAAGAAAACCTA  78 89
SH07_RS21595 4354771 .. 4354794 -  -5.3  -4.37658   AACTGGCTGACAAAA          CGGTATCCA TCCTGT TGGATAGCG           TTTCACGCCTGTTCA  68 124
SH07_RS21590 NONE
SH07_RS21585 NONE
SH07_RS21580 4349556 .. 4349597 -  -9.5  -4.32607   CTAAAATTCAATAAA TTGCACCGATGCGTAGTCCC TAT AAGCTTACGCATCGG-GCAA TTGTATTTACGCCAT  88 32
SH07_RS21515 4334201 .. 4334223 -  -7.6  -3.27923   CTGGAAGATCAGCAA           CGTAGCCGCG ATC CGCAGCTGCA           AGTGGTAACCAATAA  62 243
SH07_RS21500 4332581 .. 4332606 -  -8.3  -3.83724   AGGAGATAAGGCAAA         CCGATCGCA ACATTGAG CGCGATCGG          TCCCCTCGCCCCTCT  75 95
SH07_RS21485 4329091 .. 4329129 -  -6.8  -2.62263   ATGGCCCGCAGATGA  CCACCGCCGAAAAGGTA CGGATT TTCCTTTTCGGCG-TGT   TTGAACTGCTGGCCT  52 72
SH07_RS21470 NONE
SH07_RS21465 NONE
        ftsX 4324895 .. 4324944 -  -5.7  -3.68292   ACCGGGAAGAGACAA CGGGGT-CTCTTTCCCTGCTACGG AAC CCATTGCAGGGAAAGAGTATAACA CGCTTTTATTATTCA  61 34
SH07_RS21455 4323813 .. 4323832 -  -7.8  -5.75538   CCCAAAAAACAAAAA            CCCCGGAC TCTC ATCCAGGG             TTCTCTGCTTAATAG 100 47
SH07_RS21450 4322400 .. 4322411 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG TTTA CGCC                 GCATCCGGCATGAAG  64 94
SH07_RS21435 4320347 .. 4320367 - -14.7  -2.73159   GTAACCTTTCTAAAC            CCGCCCGCA TTT TACGGGCGG            TGGGATGATCACTTG 100 34
SH07_RS21430 NONE
        livM 4318121 .. 4318134 -  -3.1  -2.97503   TTAACAGATAATAAT               GGC-TG ACT CATGCC               TGCTCTCCTTTCGCT  44 19
        livG NONE
        livF 4316615 .. 4316630 -    -9  -3.53811   GTCACCTGTCTCAAA              GGAGTC TTTT GACTCC               CTATCAATCAACGTG  73 44
SH07_RS21410 4316452 .. 4316464 -  -4.1  -2.89304   GGGAAAATATAGAAG                GTCTG AAT CAAAC                TCTACAGATTGCTCA  46 46
SH07_RS21405 NONE
SH07_RS21400 NONE
SH07_RS21395 NONE
        ugpC NONE
        ugpQ 4311242 .. 4311275 -  -9.5   -4.0162   GCCGGAGAGGAGAAA     CGGCGACATGCTGAA TCAG CCCAGCACGCCGCAG      CCTGACATTCCGTTG  81 45
         ggt 4308976 .. 4308997 - -14.5  -3.79419   TGCCCTGACAAAATA           GCCCTCTTC CCAC GAAGAGGGC            CGCTAACCTTAGTAC 100 34
SH07_RS21345 4303636 .. 4303651 -  -3.2  -2.94099   GCCTGGGATGATAGA              GGGTGA AAAT TGACCC               CTCTGTTCAAAAAAA  44 67
SH07_RS21340 4302794 .. 4302825 -   -10  -4.10429   AACGACGCGGCAAAA      CCCCGGAAGCGTAC ATCA GCACGCGACCGGAG       CGAGCGAGGAAGCCT  88 75
SH07_RS21335 4301549 .. 4301575 -  -5.2  -5.01845   TACAAGAATTAAAAA         TGTTACGGGTAA CTG TTATCGGTAACA         TTGTCCAGCCGGACA  78 106
        gntK NONE
SH07_RS21325 4299613 .. 4299636 - -10.3  -4.17048   GTTTTTCGAAAAGAA          CCCGGTAGC GTCACA ACTACCGGG           CGAACAAACTTAACT  91 35
SH07_RS21315 4297664 .. 4297681 -  -9.8  -3.15996   TATTACGCACTAACA             GGGGCG GCATCG CGCCCC              AGATTTAATGAATAA  74 44
SH07_RS21310 NONE
SH07_RS21305 NONE
        glgC NONE
        glgA NONE
SH07_RS21290 4288023 .. 4288040 - -10.5  -5.41143   GATGGCGGAAAAAAA             CGGGACC CTTT GGCCCCG              TTCTATTTATTGGTG 100 44
SH07_RS21285 4287507 .. 4287531 -  -8.5  -2.68835   GACAAACACAAAACT          GCCTGATGCGC TAC GCTTATCAGGC          CTACGTGGTTTATGC  63 143
        glpE 4285419 .. 4285436 -  -6.3  -4.01888   AGGGGACAGTATAAA             GCGTTACG CGC CGTA-CGC             CACCTCTGCGGGAAA  67 11
SH07_RS21270 NONE
SH07_RS21265 4283368 .. 4283378 -  -8.2   -3.1855   CGTTTTAACACCGAA                 GCGC GGC GCGC                 CTGGTTGGCTTTTGC  63 419
SH07_RS21255 NONE
SH07_RS21250 4279246 .. 4279268 -  -8.4  -2.76404   CGGACGTAAAAGTGA           CGCCCAGC GCGTGTT GCTGGACG           CATTAAAACTGGCGA  60 514
SH07_RS21240 NONE
        malQ 4271861 .. 4271900 -  -5.7  -2.78018   ATTCGGGATGAATTA  GTAGGCCGGATAAGACGC GTCAA GCATCGCATCCGGCAT-C  AACCGCACTCTACTT  53 35
SH07_RS21215 4267590 .. 4267620 -  -4.6  -3.78775   TGCCTGATGATGAAA       TCATGCAGCACC GACGTAT GGCGCTGCTGGA       GTTAATTCAAAAACA  58 403
        ompR NONE
        envZ 4258413 .. 4258434 - -13.7  -4.65153   TTATAGAAAGCAAAA           CGGGAGGCA CCTT CGCCTCCCG            TTTATTTACCCTTCT 100 31
SH07_RS21165 NONE
SH07_RS21160 4254580 .. 4254614 -  -7.9  -2.79023   CAAGTTCATTAATGA    GTA-TGTCCGGCAGAG AGGG CTCTGCCGGATTTTAC     GACTAATACACCTGA  61 50
        nudE 4249355 .. 4249368 -  -9.5  -4.72272   TGTTCTGATTAAAAA               GGCGC TTCG GCGCC                TTTTCAGTTTGCTGA 100 170
SH07_RS21125 NONE
SH07_RS21120 NONE
SH07_RS21115 NONE
SH07_RS21110 NONE
        hofQ 4243026 .. 4243052 -   -10  -4.05446   TTCGTTAATGATAAA         CCCGCTTCGCTC AGA GAGCGCCGCAGG         ACATGAACTGAAACC  86 362
        aroK NONE
        aroB 4241288 .. 4241306 -   -11  -3.15621   AACCTGAAGCTAATA             GACCGCTT GAT AAGCGGCC             TGACCTTTCTTGTTG  79 41
SH07_RS21090 4239906 .. 4239933 - -14.2  -3.05596   CAGCGCTTCAGGCAA        CTCCCGCAACGA TAAA CCATTGCGGGAG         ATAACCTTGATTACT 100 36
SH07_RS21085 NONE
SH07_RS21080 NONE
SH07_RS21075 NONE
SH07_RS21070 4236394 .. 4236407 -  -9.5  -5.67967   ATGAGGATAAAAAAA               CCGGG TTTC CCCGG                TTTCAGAGTGATGAT 100 176
SH07_RS21065 NONE
SH07_RS21060 4234933 .. 4234950 -  -2.8  -3.90112   GTTCCTTGAATTAAA             TATTCA TTTTTT TGAATA              TTTAGGTTGTGCGAC  52 59
SH07_RS21055 NONE
SH07_RS21050 NONE
SH07_RS21045 NONE
SH07_RS21040 NONE
SH07_RS21035 NONE
SH07_RS21030 4228723 .. 4228759 - -16.6  -3.30124   CCGTAGGCCGGATAA    GATGCGCCAGCATCGC ATCCG GCGATGCTGGCGCGTT    GAATTTTACATCCCG 100 125
SH07_RS20970 4215618 .. 4215639 - -17.3  -3.46602   GCCGGGAGAGCAGAA           GCGCGGGCA AGAT TGCCCGCGC            GAGAAATCATTACGG 100 35
SH07_RS20965 NONE
SH07_RS20960 NONE
SH07_RS20955 4214191 .. 4214201 -  -2.4  -3.03214   ATGGCAATCAGAAAT                 CAGC GAT GCAG                 GAAATTAGCCAGCAG  42 14
        argD 4212832 .. 4212859 -  -8.4  -2.92792   ATGCAGGCTAAACCA        TCGGATAAGGCA TTCA CGCCGCATCCGA         CATCTTTTGCCTGAT  65 50
SH07_RS20930 4209309 .. 4209332 -    -6  -3.79687   ACGCCGGATAAAATA          CTATCCGGCT TCAC AACGGGATAG           TTAAGTCACGCGGCA  63 31
SH07_RS20905 NONE
SH07_RS20900 NONE
SH07_RS20895 NONE
SH07_RS20890 4201795 .. 4201809 - -12.8  -5.42259   TGAGGCGTAAAAAAA               GCGGGG ATT CCCCGC               TTTTTTGTCACTTTT 100 47
SH07_RS20880 4200499 .. 4200520 - -17.3   -5.7946   CCTGTAATAAAAAAA           CCGCCGCCT GGTC AGGCGGCGG            TTCTTAATGCTTATT 100 36
SH07_RS20875 NONE
SH07_RS20870 4199262 .. 4199280 -  -3.8  -3.40403   TTCGTTTCATCAGAA             CTGTACCA CCC TGTCACAG             GTCAGCGAGGCTTCC  49 1
SH07_RS20865 NONE
SH07_RS20860 4198524 .. 4198546 - -12.8   -4.7268   AAACACGTAATAAAA           CGTCCTCACA CAA TATGAGGACG           CCGAATTTTAGGGCG 100 81
SH07_RS20855 NONE
SH07_RS20850 NONE
        fusA 4195273 .. 4195298 - -15.5  -2.78935   ATATTCCTTACTATA         GTGCTCTCCCC TTCA GGAGAGAGCAC          GGGACTTTGGTATTA 100 51
         tuf 4194024 .. 4194039 - -11.8  -4.86939   CAACAAATGCAAAAA              GGGCGC CGAA GCGCCC               TTTTCAATTCAAAAC 100 55
SH07_RS20835 4191017 .. 4191043 - -10.2  -5.20606   AAATATGAATAAAAA         TAATGGGCTACC AAA AGTAGCCCATTG         ACAAAAAATGCGGCG 100 66
SH07_RS20830 4190716 .. 4190729 -  -3.8  -2.79579   AGTCAAAAAACACAC               TCCG TTTATG CGGA                CTCCTTAAACTCCGG  45 17
SH07_RS20825 4190145 .. 4190166 - -13.7  -3.14931   TGGATCTCTTATTAA           CCGGGAGGG TTCT CCCTCCCGA            CACGGCTCAACCTTC 100 32
SH07_RS20760 NONE
SH07_RS20755 4177331 .. 4177345 -  -8.6  -2.52795   AATTCGGCTAACTGA               GGTTCA GAT TGAACC               TGCTGTCAACTACGA  63 112
        rpsJ 4176878 .. 4176892 -  -3.5  -2.72379   TCAATCGCTCAATGA               CCTGA TTAAC CCAGG               CTGATCTGCACGTCT  44 16
SH07_RS20745 NONE
        rplD NONE
        rplW NONE
SH07_RS20730 NONE
SH07_RS20725 NONE
SH07_RS20720 NONE
SH07_RS20715 NONE
SH07_RS20710 NONE
SH07_RS20705 NONE
SH07_RS20700 4172188 .. 4172213 - -14.9    -5.252   TATGGGTAGAAAAAA         TAAACGGCTCA TTTC TGAGCCGTTTA          TTCGTATTGAGAGAG 100 50
SH07_RS20695 NONE
        rplX NONE
SH07_RS20685 NONE
        rpsN NONE
SH07_RS20675 NONE
SH07_RS20670 NONE
SH07_RS20665 4169174 .. 4169184 -  -3.2  -3.32963   ACCTCTACCTTAGAA                 CTGA AGG CCAG                 CTTCACGGGCAGCAT  47 9
SH07_RS20660 NONE
        rpmD NONE
SH07_RS20650 NONE
        secY NONE
SH07_RS20640 4166483 .. 4166512 - -12.3   -4.6645   CACAGACATACAAAA       GATTG-GCTGGCTA ATC TAGCCAGCTCAACC       CAACTTTGCAAGAAA 100 55
SH07_RS20635 NONE
SH07_RS20630 4165626 .. 4165644 -  -4.4  -4.18763   AACAAACCTGGAAAA             CGAGGCGT TAT ACGCGACG             TTTTTTCGGCGGACG  61 14
SH07_RS20625 4164976 .. 4164994 - -10.4  -3.14132   TCTCTTTGGTACTAA             GCTTTACT TGG AGTAAAGC             TCGACGATCAGGTGT  77 10
SH07_RS20620 NONE
        rplQ 4163506 .. 4163519 -  -9.5  -5.61596   ACGGGTATAAAAAAA               CCCGC CGGG GCGGG                TTTTTTTACGTTGCT 100 46
SH07_RS20610 NONE
        zntR NONE
SH07_RS20600 4162338 .. 4162354 -  -5.8  -3.54424   CGTGATTTGCTGAAA              GAGCAG AATAA CCGCTC              TTAACAAGCGCCTGA  59 26
SH07_RS20570 NONE
SH07_RS20565 4155889 .. 4155900 -  -2.2  -3.29511   CTGATTTCGCCATAA                CAAC TTAT GCTG                 AATTAAAGAAATGAT  45 40
SH07_RS20560 NONE
SH07_RS20555 NONE
SH07_RS20550 NONE
SH07_RS20545 4153562 .. 4153575 -  -2.3  -4.77173   GTCCCACAAAATAAA               CGGCT GGAG AGCGG                ATATCTGTATCTCGG  68 140
SH07_RS20535 4151111 .. 4151124 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGTACGCTTCTT  40 34
SH07_RS20530 4150985 .. 4150997 -  -6.3  -3.57309   TAAAACCTCTTCAAA                TTTGC CGT GCAAA                TTTGGTAGGCCTGAG  63 28
SH07_RS20525 4150822 .. 4150855 -  -6.7  -4.49756   TTTTAAAGAGCAAAA     CTTCGCAGTGAACCT TTGC AGGTACACTCTGAAG      TATTTTTTATTTAAT  76 52
SH07_RS20520 4147715 .. 4147728 -  -2.4  -2.78679   GGCCGCCAGGCAAAT               TCTG TTTTAT CAGA                CCGCTTCTGCGTTCT  41 84
SH07_RS20515 NONE
SH07_RS20510 NONE
SH07_RS20505 4147297 .. 4147346 - -23.3  -4.09117   TTCACCGACAAACAA CAGATAAAACAAAAGGCCCAGTC TTCC GACTGAGCCTTTTGTTTTATTTG ATGTCTGGCAGTTCC 100 28
SH07_RS20460 4136398 .. 4136412 -  -5.6  -5.21683   AGTGAAAAAAAGAAA               GACCGG CAA CCTGTC               AAAACGAAGCCGGTT  88 340
SH07_RS20400 4128346 .. 4128356 -  -2.4  -3.75024   GGCCATCATTAATAA                 CCAG ATC CAGG                 GTCGCACGCTGGTGA  51 109
SH07_RS20390 4125300 .. 4125323 -  -3.8  -4.14243   TATTCTACGTGAAAA          CGGATTAAAC GGCA GGTTAAACCG           AGTATCTTTGTGAAT  60 18
SH07_RS20380 4123931 .. 4123958 -  -8.4  -2.66316   TCTCGTATCAGACCA        GGCAGGGTAAAC AGAC ACTTCCCCTGCC         TGCATCCGATTACTC  63 35
SH07_RS20375 NONE
SH07_RS20370 NONE
SH07_RS20365 NONE
SH07_RS20360 4120222 .. 4120242 -  -2.4  -2.63208   TGTGACTCAAAAACC            CTTTGCCG GATGG CGGCCCAG            CATCTGTTTACATCA  40 33
SH07_RS20355 4116245 .. 4116294 - -12.1  -3.30124   TTGTAGGCCTGATAA GACGCACAGCGTCGCATCAGGCAA CGG CTGCCGGATGCGGCG-TGAACGCC CTATCCGACCTACGG  89 113
        tldD 4114402 .. 4114415 -  -2.3  -3.86897   GTTACGTTGTACAAA               CCTGT GCCA ACGGG                TTCCCCTCACCCTAA  51 117
SH07_RS20340 NONE
SH07_RS20335 4112128 .. 4112139 -  -2.2  -2.97029   CGTGATTAACCAAAC                TCAC GCAG GCGA                 TGGGCCATTTTACGG  42 4
SH07_RS20330 4110119 .. 4110137 - -11.7  -5.17353   ATAGCCATGAAAAAA             CCGACGC TTTTG GCGTCGG             TTTTGACTTAACTAT 100 33
SH07_RS20325 4109751 .. 4109771 -  -8.1  -2.78384   TCTTGTCCGACGATA            TTGCCCCCG GTT CGGGGGCTT            TTTTTTGCGCTAATG  61 35
SH07_RS20310 4107207 .. 4107238 - -12.5  -4.07568   GTCGTGCGCTCAAAA      CAAAAAACCGGAG TCTGTG CTCCGGTTTTTTA       TTATCCGCTAATCAA 100 41
SH07_RS20290 4102700 .. 4102710 -  -2.6  -3.59814   CCAGCACACAAAAAG                 TTTT GGG AAAA                 AAACTTTCTTGTAAC  50 109
SH07_RS20285 NONE
SH07_RS20280 4101687 .. 4101700 -  -9.5  -5.64274   TTAGCTATAAAAAAA               CCCGC CGAA GCGGG                TTTTTTCGAAAATTG 100 64
        sspA 4100711 .. 4100721 -  -3.2  -2.60797   TCCATACAGATTAAC                 TCCG GCC CAGA                 CGCATTTCACGTTCT  42 10
SH07_RS20270 4100172 .. 4100202 - -12.7  -4.77157   TTAAGTCATTAAAAA       GACAAAACAGGCC GCCTG GGCCTGTTTTGTA       TTACTTCACAACGCG 100 26
SH07_RS20260 4097534 .. 4097549 -  -2.6  -2.91276   GCTTGTCTGATAAAC              GATATA CCTT TATACC               TGTTATACCAGATCA  43 98
SH07_RS20255 4096560 .. 4096609 - -10.9  -2.89683   ATTGTAGGGTACAGA TGCGTTTATTTCCCCTCACCCG GTAGGGG CGAGCGAGGGGAAAC-AACTCA CCCGCGCTCTTGCAT  77 23
SH07_RS20250 4094981 .. 4095000 - -10.7  -2.78679   TTCCCTTAGCGAAAG            GCCCGGT ACATAG ACCGGGC             AACAGGATTAACTTT  77 33
SH07_RS20245 NONE
SH07_RS20240 NONE
SH07_RS20235 4092741 .. 4092753 -  -3.3  -3.32536   AAAGGAGCCGGAGAA                GCGCA TTA TGCTC                TGGCAGGTTTGCCTA  47 210
SH07_RS20215 4089417 .. 4089456 -  -6.2  -4.08394   ACATCTGCCGTAAAA  TCCACGCCTGACGGCTAC GCAC GTAGCCCGATGGCGAGGA   GACTTTGAAACGAAG  69 195
SH07_RS20150 NONE
SH07_RS20145 NONE
SH07_RS20140 NONE
SH07_RS20135 NONE
SH07_RS20130 4077153 .. 4077177 -  -7.2  -5.05712   ATAAATAAGCAAAAA         GCCTCG-CTGA TAAA TCAGACAAGGC          TCGACTTGCAGGCAG  89 85
SH07_RS20125 NONE
SH07_RS20120 4075424 .. 4075436 -  -4.8  -3.52102   AGTTTATCGACAGAA                CGCA GTTGA TGCG                TAGCTACACTAAACC  53 98
        rplU NONE
        rpmA 4073086 .. 4073107 - -15.9  -4.75174   TATCGAATGTAAAAA           GCCCCGCAA CGTG TTGCGGGGC            TTTCATCCGTTACCG 100 54
SH07_RS20095 NONE
        obgE 4070678 .. 4070704 - -15.9  -4.71382   ACAATTAGTCAAAAA         GAAACCCCGGC ACATG GCCGGGGCTTC         AGATTATTGACAAAG 100 177
        greA 4068450 .. 4068464 - -12.8  -4.36914   TGTTCGTTGATAAAA               GGCCGC ATA GCGGCC               TTTTTCCTTTCTTTA 100 74
        rrmJ 4067240 .. 4067254 -  -2.8  -3.40899   AACCTCTTATTACAA               CTGTGT TAA AAACAG               CGTCAGGATACTCTA  48 80
        hflB 4065220 .. 4065239 - -12.8  -5.56673   ATTGATAAGAAAAAA            CCCCGGAG CACG CCCCGGGG             TTTTCGGTACAAATA 100 61
        folP NONE
        glmM 4062968 .. 4062980 -  -9.1  -5.24129   TTCGCTGAGAAAAAA                GGCGA CAA TCGCC                GCCTTTTTAGCCAGT 100 52
        secG NONE
SH07_RS20045 4062308 .. 4062339 -   -11  -4.32436   AGACCAGGACCAAAA      CGAAAAAAGACGCT TTTC AGCGTCTCTTTTCT       GGAATTTGGTACCGA 100 32
SH07_RS20040 4060084 .. 4060103 -  -2.1  -4.68593   CTGACGATGGAAAAA            GGCGA CTCGGTGTTC TCGCC             AGATGATCGTATTGG  66 184
SH07_RS20030 4058346 .. 4058361 - -10.4  -5.60689   TCAGATAACAAAAAA              CCCCGA TAAA TCGGGG               CTTTATATAACTGAA 100 151
SH07_RS20025 4057836 .. 4057852 -  -6.5  -2.51207   CAGACTATTAAAAGT              GGGGAAC CAG GTTCGCC              TTCTGGATATTACTC  53 1
        nusA NONE
        infB 4053475 .. 4053489 - -11.4  -5.24129   TCTCCTGACAAAAAA               GGGGCT GTT AGCCCC               TTTTTAAAATTAATT 100 152
        rbfA NONE
        truB 4052044 .. 4052058 -  -2.8  -3.95071   CAAAGTGTTAAACAA               TTTACG CGA CGTTAA               GCGGCAGTATTCTAC  54 74
SH07_RS20000 4051651 .. 4051667 - -10.8  -5.03314   GTCAGCTTGAAAAAA              GGGGCC ACTCA GGCCCC              CTTTTCTGAAACTCG 100 47
SH07_RS19995 4049274 .. 4049295 - -15.1  -4.07568   CCTGCCCGGTTAAAA           GCCCCCCGC CGCA GCGGAGGGC            AAATGGCAACCTTAC 100 37
SH07_RS19990 4048254 .. 4048279 -  -7.5  -4.04023   ATTAACGAACAACAA         CGCCCTCACCC GTTA AGGTGATGGCA          ATCAAAAAAGATTAC  72 60
SH07_RS19985 4046179 .. 4046201 - -10.6  -5.82281   AAAGACAGAAAAAAA           GCCCCGAT GGTAAAA ATCGGGGC           TGTATATATTATTTT 100 69
SH07_RS19975 4044783 .. 4044805 -  -8.4  -2.98823   GCTGTCCTACATAGA           CCTGATAAGC GAA GCGCATCAGG           CATTGTGTAGGCAGC  65 67
SH07_RS19955 NONE
SH07_RS19950 4040375 .. 4040399 -  -2.1  -3.60151   CGCGGGAAAGGAGAA         CTAACGCTGG TGTTTT CC-GCGCCAG          TGGGCGATCGTTCGC  49 155
SH07_RS19940 4039692 .. 4039708 - -10.1  -2.70946   GTGGTTGATAAAGAT              CAGCTGG TTA CCAGCCG              GACACCGGACGATCT  67 63
SH07_RS19930 4038417 .. 4038427 -  -5.4  -2.65264   TGACCAGTCATAGCA                 TTCC CCA GGAA                 TAAGTTATGATAATT  49 83
SH07_RS19925 4037336 .. 4037347 -  -7.2  -3.50393   CCGTAGGTCAGATAA                GGCG TTTA CGCC                 GCATCCGACATGTTT  66 50
SH07_RS19900 4032709 .. 4032741 - -11.5  -4.07885   CATCGTGCGGTAAAA     GAAGACGTTGCGTT TTGATT AACGCAACG-CTTC      GGCACTGTTACCCCT 100 33
SH07_RS19825 4018017 .. 4018028 -  -5.8   -4.7416   GCAAAATGTTAAAAA                GAGG ACAT CCTC                 CTGCCGACTGGGAAA  81 127
SH07_RS19805 NONE
SH07_RS19800 NONE
        garR 4012067 .. 4012078 -  -7.2  -2.66316   CCTGTTACCACATGA                CGCC GGAG GGCG                 TTTCTCTTATTCGGC  58 88
SH07_RS19790 4010455 .. 4010482 -   -15  -4.07568   TCTGCCCCTCCAAAA        GCAAAAACCCGC CGAA GCGGGTTTTTAC         GTAAATCAGGTGAAA 100 442
SH07_RS19770 4006331 .. 4006351 -  -2.5  -3.54146   CGCCTGAATTAAATA            TGTAGGTAA CCG TAACCGACA            CCTGCAAGACAGACA  48 75
SH07_RS19765 NONE
SH07_RS19760 NONE
SH07_RS19755 NONE
SH07_RS19750 4002028 .. 4002039 -  -2.2   -2.7186   AAATGCCTTGAATCA                GCCT ATTT AGAC                 CGTTTCTTCGCCATT  40 61
SH07_RS22880 NONE
SH07_RS19740 NONE
SH07_RS19735 3998755 .. 3998789 - -11.5  -3.05384   TTGCCGTTCAGTGAA    GTGGAGCGGAACGACC TTAC GACCGTCCCGCTC-AC     GAGGCTTTACGCACT  83 32
SH07_RS19730 3997318 .. 3997335 - -11.3  -6.00086   AGATCACAAAAAAAA             GGTGCAC ATTT GTGCACC              CAAGGATGAAAGCTG 100 50
SH07_RS19725 3995735 .. 3995749 -  -2.8  -4.90217   CAAACATATTAAAAA               CCTTAA AAT TTCAGG               TAAATCAAGAAAATG  67 30
SH07_RS19720 3994141 .. 3994169 -  -2.3  -4.61527   AAAATTGGCCAAAAA       GCGCCAGC-CGG TGAAGC CCGTGGTGGCGA        AAGAACCTGCTCGCA  66 272
SH07_RS19705 3992352 .. 3992371 -  -9.2  -2.62425   AATTAATCTTAGAAT            TGGGGCGA TATT TCGCCCCT             TTTTATTAACAATAA  68 47
SH07_RS19640 NONE
SH07_RS19635 3980851 .. 3980875 - -12.9  -4.21922   GTATGGAAAAGCAAA          CGGCGCTTCAC ATT ATGAAACGCCG          TTTTTTATTAACAAC 100 52
SH07_RS19630 3980247 .. 3980257 -  -2.4  -3.34517   ATCGTCTGGCAAATA                 GCGC CCT GCGT                 AATTAATTGTTTAAC  45 36
SH07_RS19600 3973768 .. 3973799 - -12.2  -2.52795   AACGTGCTGAACGTA      GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA       GGTAACTCCCAATCT  81 40
SH07_RS19595 NONE
SH07_RS19590 NONE
SH07_RS19585 3972629 .. 3972644 -  -4.6  -3.76641   AGGGCAAGAGCCAAA              CCGCGC GCTG GCGCAA               CCGCTGATTGATAGC  58 184
SH07_RS19545 3959956 .. 3959984 - -14.7   -3.9344   AAGCGTAATATCAAA        TCGGATGGCGA TACGACG TCGCCATCCGA        TCTTTTTATACGACG 100 31
SH07_RS19535 3956426 .. 3956441 -  -3.3  -5.72622   TGCACAAATAAAAAA              GATCA TTGCGG TGATC               GACCGCGCCGCTTTT 100 215
SH07_RS19525 3954760 .. 3954781 - -14.5  -3.91597   ACCAGATATAGCAAA           GGCTGACGA GAAA TCGTCAGCC            TTTTTCTTTTTATAT 100 46
SH07_RS19515 3954019 .. 3954037 - -11.7  -3.85698   GGCCCTCTGCACAAA             CGCCACC TTTTC GGTGGCG             TTTTTTATCGCCCAC  95 30
SH07_RS19495 3948418 .. 3948428 -  -2.4  -2.85668   CATTCTTACACCATA                 CGCC ACC GGCC                 CCAGTCCGATTTACT  41 202
SH07_RS19475 3944089 .. 3944101 -  -3.3  -3.22909   TTAAAGGAGGAAAAG                GCGTT GCT ACCGC                TTTTGGTGCCATCGC  45 324
        folB NONE
SH07_RS19460 3942281 .. 3942294 -  -8.1  -3.30124   TTGTAGGCCTGATAA               GACGC GCAA GCGTC                GCATCAGGCGTTGAT  66 117
SH07_RS19445 NONE
SH07_RS19440 NONE
SH07_RS19435 NONE
SH07_RS19430 3934178 .. 3934197 - -11.4  -3.71649   GGCTGAAACGGGAAA            GCCCCTCC CGAA GAAGGGGC             CTTGTATAAGGAAAG  88 224
SH07_RS19405 3930794 .. 3930809 - -11.8   -4.5394   ATACAAACACTAAAA              CGGGCC ATCA GGCCCG               TTATATCAGTGCTCT 100 31
        ribB 3922832 .. 3922853 -  -5.9  -5.63236   AGGGAAAAATAAAAA           CCGAAGCCTG CTA CAA-CTTCGG           TTTCTTGATTAAGGC  95 61
SH07_RS19360 3922406 .. 3922442 -   -11  -4.40963   ATTGGTTAAAAACAA    CATCAGAAGTTGTCCA GCGCA TGGACAACTTCTGCCA    GCTTCACGAAAGCCT 100 40
SH07_RS19350 3920667 .. 3920688 - -15.9  -2.84619   GAATAAGCCACGATA           CCGGATGGC ACTC GCCATCCGG            TAATTGTTAGCCTAT 100 32
        nudF NONE
SH07_RS19320 NONE
SH07_RS19315 3915082 .. 3915096 -  -2.8  -2.93769   AAAGAAGCGTAGACA               TCAGTA GCC TTCTGA               AGCGGTATCAGGTTG  43 11
SH07_RS19310 3914508 .. 3914519 -  -4.4  -2.88544   GTTGATCGTCAGAGA                TGGT GCAG ACCA                 AGAAAATCGACGATC  46 7
SH07_RS19305 3912070 .. 3912081 -  -2.2  -4.13995   GTTCCATAAAGCAAA                CCAA TTCC TCGG                 TATGGAACCGCTGCC  56 524
SH07_RS19290 3910791 .. 3910806 -  -6.8  -3.87815   GCCCACCCGGACAAA              CCGCTA CCGG CAGCGG               GCTTGGGCTATCGAT  68 174
SH07_RS19275 3908328 .. 3908350 -  -9.1  -2.90496   CTCCCTGCGAAATTA           TTCCCGGGA ACGCG TCCCGGGAG           CGGTAACAATTACGG  68 35
SH07_RS19270 3907765 .. 3907785 -  -3.9  -4.41114   TGACCATATAAGAAA            GTGGCGC ATTAGTA GCGCCAG            TTTGAAGCAGGAATT  65 65
SH07_RS19265 NONE
SH07_RS19260 3906901 .. 3906915 -  -4.9  -5.63517   CCGGTAAAGAAAAAA               GCGAG TTGCC CCCGC               TTTTCCATTAATTAA  91 37
SH07_RS19255 3905152 .. 3905178 - -11.5  -3.10732   AGATCAACGTGAATA         GCGCCGCCGGA CGTGC TCCGACGGCGA         TAAAGGCATCAATGT  84 34
SH07_RS19250 3902562 .. 3902580 -  -5.2   -3.3251   ATATATAGCATAACA             CCCTCTGA AGG TCTGAGAG             ACTGGCATTGTACGT  55 236
SH07_RS19245 3901778 .. 3901804 -  -2.2  -3.33151   CTGGCTAAAGTAATA         CCGTGCAGGAAA GTG TTCCCCGCAAAA         ATACAGATTGCCGAC  45 41
SH07_RS19240 3900299 .. 3900331 - -12.8   -2.6993   AGAAATCGAAAGGTA      TTCCATACTCGCCC TCCTC GGGCGAGTATGAAG      ATTACGGTACCGGAT  91 27
SH07_RS19235 3897969 .. 3897996 -  -6.9  -5.73339   AGAATGATAAAAAAA        TCCCCGGTAGC GTGTCA GTTGCCGGGGA         TATTTTTTAACGTCC 100 32
SH07_RS19210 NONE
SH07_RS19205 3893196 .. 3893215 -  -2.1  -3.16288   TAAACGCCATGAAGA            TCAGGTA ATGACG TTCCTGA             TGATCCTGCCAATTG  43 148
SH07_RS19190 NONE
SH07_RS19185 NONE
SH07_RS19180 3889628 .. 3889654 - -13.8  -5.44119   TTTAGGTTAAAAAAA         TGCCCGGTTG TGAAAAG CAACCGGGCA         TCATTGTGAATTCAC 100 265
SH07_RS19170 3888025 .. 3888045 - -15.4  -3.62775   ATGACCTGTTAATAA            CGGGCGCG CGAAC CGCGCCCG            AATCAGATCAGTGAT 100 33
SH07_RS19160 3885922 .. 3885933 -    -3  -3.04322   CGTAATCCCGTAAGA                GATA AACC TATC                 AGGAGAGATATTTAT  44 24
SH07_RS19155 3885530 .. 3885544 -  -2.8  -3.14931   CGTATGTTTGATCAA               TTTTCG AGG CGATAA               CCGGCCATAAAAAAG  44 7
SH07_RS19150 NONE
SH07_RS19145 NONE
SH07_RS19140 NONE
SH07_RS19135 NONE
SH07_RS19130 NONE
        hybD NONE
SH07_RS19120 NONE
        hypA NONE
SH07_RS19110 3878744 .. 3878775 -   -13  -2.58579   GCAATCGTGCACAAT      GCCTGATGCGACGC TGCC GCGTCTTATCAGGC       CTACGAAAGCTAATC  91 42
SH07_RS19100 3875688 .. 3875724 - -16.8  -3.16668   GAATATTTTGATTAA    TCCCCGTACTGATTAT TCTTC ATAATCAGTACGGGGT    TGCTACAACATGTAT 100 40
SH07_RS19095 3873907 .. 3873941 - -13.7  -4.68994   ATCACTAGTCAAAAA     TGGAAATGCCCGATC GCCAG GACCGGGCATTTTCA     GGAAGGTTAAATCAA 100 32
SH07_RS19085 NONE
SH07_RS19080 NONE
SH07_RS19075 3870371 .. 3870381 -  -5.4  -4.22748   CATGAAGAAATGAAA                 TGAC TGA GTCA                 GCCGAGAAGAATTTC  65 61
SH07_RS19065 3867968 .. 3867996 -  -2.9  -3.35679   TGCGCGGATCTACAA        CGCGGTGTTGCAG CGG CTGCCGCACGTCG        CCCAGCGCGCAGCAC  47 148
SH07_RS19055 NONE
        glcE NONE
        glcF NONE
SH07_RS19040 NONE
SH07_RS19035 3860671 .. 3860696 - -12.6  -2.83164   GCAGTTACTATCATA         GCCCCGACAA TAAAAC TTGCCGGGGC          TTTTTTGACGCTATT  89 39
SH07_RS19030 3858637 .. 3858663 - -12.4  -3.58779   AATAATGTAAATGAA         GCCGGATGAT ATTAACG ATCATCCGGC         TTTATTGATTTACGA 100 35
SH07_RS19020 3853545 .. 3853578 - -13.1   -2.8294   TAGGCCCGATAAGCA     GGCGCATCGGGCAAA TGTG TTAACCCGGTGCGCC      TTATTTCATGCCGGA  91 73
SH07_RS19015 3852592 .. 3852608 -    -3  -3.18144   AATAAGAGTTAAAAT              GTCACT TTGAT AATGAC              GTGGTTATCATTAAA  46 36
SH07_RS19010 NONE
SH07_RS19005 NONE
SH07_RS19000 NONE
SH07_RS18995 3849532 .. 3849548 - -11.5  -3.65581   ACTAATTCTTAAGAA              CCCGCCC ACA AGGCGGG              TTTTTGCTTTTGGAT  90 143
SH07_RS18980 3846062 .. 3846083 - -11.5  -5.30616   TTACGCAAAGAAAAA           CGGGTCGCC AGAA GGTGACCCG            TTTTTTTTATTCTTA 100 38
        trmB NONE
SH07_RS18950 NONE
SH07_RS18945 3840720 .. 3840743 -  -8.8   -5.4505   TCCCTCAAGAAAAAA          TCAGGCCAGC ATTT GCTGGCCCCA           GATTGATAACAAAGT 100 2
SH07_RS18940 3839942 .. 3839964 -  -9.2  -4.12315   AAACGAAGAATTAAA           CGGCATAAAA AAG TATTATGCCG           TCTTAAAATAGAGGA  85 41
        ansB 3838730 .. 3838750 - -14.7  -4.74103   GTCTGAAGTGAAAAA            GCCCCGGCA CGA TACCGGGGC            GAGGCGATTAGTACT 100 33
SH07_RS18930 3837193 .. 3837205 -  -6.2  -4.30576   TGCGTACCACCAAAA                CGCG TCATC CGCG                TGGTTTTATGCAAGG  72 454
SH07_RS18900 3832930 .. 3832947 -  -7.7  -4.15044   CGGGCGCTCAACAAA             GGCAAAG TTGA CTCTGCC              TCTGCGGTTATTATT  76 254
SH07_RS18855 3825187 .. 3825204 -  -8.5  -4.52703   GAAACCACGAGAAAA             CTCTTGT TTTT ACAAGAG              CGCCCTTGTTCAGTC  87 296
SH07_RS18845 NONE
SH07_RS18840 3822909 .. 3822941 - -14.9  -5.71712   GTCGATATAAAAAAA      CCCTTCCGCGTCG TTAGGCC CGACGAGGAAGGG      TTGGATTTGTCACAA 100 95
SH07_RS18835 3821882 .. 3821913 - -10.8  -2.52464   CGGGTGCCGAACGTA      GGTCGGATAAGGCG TTCA CGCCGCATCCGACA       TTAATGGCACGTTTT  76 65
SH07_RS18825 3818685 .. 3818700 - -10.4   -5.5074   CAAGGTAATAAAAAA              GGTCGC CGAA GCGACC               TTTTTACCCGAAATG 100 45
        cmtB 3817963 .. 3817979 -  -3.7  -3.34534   TAGAGGAGAGAGTAA              TTATCCG CGG CTGATAA              TGTCCGCTAATTGTT  49 9
SH07_RS18815 NONE
SH07_RS18810 3815239 .. 3815267 -    -8  -2.97489   GTAACGCGAAATAAT        GGCCACGCCAGG GACAT CATTGCGCGGCC        TCCCCGATATCAACG  62 13
SH07_RS18805 NONE
SH07_RS18800 NONE
SH07_RS18795 3812837 .. 3812866 -  -3.5  -3.53343   AATCGTCCGGGGAAA       CCTTACCTGTCGCA AAC TGCGACTGATT-GG       TTAATTGTCGAACAT  51 211
        gapA NONE
SH07_RS18785 3810508 .. 3810525 - -12.7  -3.90922   AGCGCGCTGAAACAA             GGGCAGG TTTC CCTGCCC              TGTGATTTTTTACTT 100 35
SH07_RS18780 3809200 .. 3809216 - -11.5  -5.40072   TTTTGGCGAAAAAAA              GACCCGC AGA GCGGGCC              TTGAGATAAGCAGAA 100 50
SH07_RS18775 3807989 .. 3808014 - -11.9  -3.33839   AAAACTAATAAGAGA         GAGGCCAGAGA GTAT TATCTGGCCTC          AGCGTTGATTACGCA  89 34
SH07_RS18770 NONE
SH07_RS18765 3806385 .. 3806410 - -13.3  -2.64472   TATCGGGTAAAGGCA         TTAGCCCGACG AATA CGTCGGGCTAC          AAATATTATTGTGCT  93 31
SH07_RS18760 3805269 .. 3805281 -  -3.3  -4.11216   TCGCTATCTGGAAAA                TGCGC CTG GCGGA                CATATTCACCACGAT  58 97
SH07_RS18730 NONE
SH07_RS18725 3797553 .. 3797571 -  -3.2  -5.27399   CAACATATCAAAAAA             TAATATTG CGG CAATATGA             ACGTTTGCGTCGCGA  79 196
SH07_RS18720 3796210 .. 3796232 - -15.6  -5.66684   GAAGGGATAAAAAAA           CGGGCAAGTC AGT GACCTGCCCG           TTGATTTTCAGAGAA 100 47
SH07_RS18705 NONE
SH07_RS18700 NONE
SH07_RS18695 3791411 .. 3791423 -  -3.3  -3.05597   TTTATTCCTTAAAAC                CGCCT TCA ACGCG                CCACCCAACCGAGGG  44 18
SH07_RS18690 3790124 .. 3790147 - -10.3  -4.39386   TTCAAATGAGGAAAA          TCTCCCGGC GAAAAA ACCGGGAGA           TGAAAGTGTGATGGG 100 69
        gcvT 3788652 .. 3788672 -  -8.9  -3.16667   CAAAAAAGTAAATCA            CGCGACGGC TTT GCCGTTACG            CACAAAAACAGGTTT  69 2
SH07_RS18680 3788170 .. 3788211 -    -8  -3.14132   CTCTCTCCTTACGAA GAGAGTGAGGGTGAGGCA TAAATT TTCCTCACCCTGATCCTC  TCCCGCAGAAGAGGA  63 50
SH07_RS18675 3785205 .. 3785218 -  -9.5   -4.7373   TCATCTGACTAAAAA               GGCGC CGAA GCGCC                TTTAGAAAATAGTCG 100 51
SH07_RS18670 3784190 .. 3784215 - -13.4  -2.79023   TAAGTCGATGAAGTA         CCGGATGCAA TACTTG TTGCATCCGG          TCAGACAACTTCCCT  93 44
SH07_RS18660 3782283 .. 3782294 -  -4.4    -3.281   GCGTAACTGAGAATA                GTTC CAGT GAAC                 ACCTGTTAGCTAAAA  51 119
SH07_RS18655 3781481 .. 3781492 -  -7.2  -3.34962   CCGTAGATCGGATAA                GGCG TTCA CGCC                 GAATCCGGCAGTTGT  64 98
SH07_RS18645 NONE
SH07_RS18640 3779113 .. 3779125 -  -4.8  -2.72144   GGATTTTGGTGAAAT                CCAG GAAGA CTGG                GAAGCCGTCTGGGAT  46 392
        xerD 3777923 .. 3777938 -    -4  -2.87132   CGTTCTTTTCAGACA              TCACGCC CGC GG-GTGA              TGCTGTTGATGAAGT  46 10
SH07_RS18625 NONE
SH07_RS18620 3775401 .. 3775427 - -11.7  -3.30903   AAAATGCGGTGATAA        GAGCG-GGATTG TACC CAATCCACGCTC         TTTTTTATAGAGAAG  86 47
SH07_RS18615 NONE
        lysS 3772695 .. 3772712 - -10.5  -5.95539   GCTTAAATAAAAAAA             CCCCGAC ATTT GCCGGGG              TTGTGAGCATAACGT 100 46
SH07_RS18585 NONE
SH07_RS18580 3767569 .. 3767594 - -11.1   -3.1352   GGGCAATCTAATAGA         TTCTCCGCGCC TTTC AGCGCGGAGAT          TTCTTTCAGAGAGGA  79 31
SH07_RS18535 3753345 .. 3753359 -  -9.2  -3.14683   ATATCCTTTCAGTAA               CCCGGA ATA CCCGGG               CCGCTAATTCACAAA  72 29
SH07_RS18530 3751476 .. 3751501 - -11.8  -3.78329   TGTCAGTAATTTAAA         GGCCGGGTGG GTAATA CCATCCGGCC          AAAGATTGTCAAGTA 100 214
SH07_RS18500 3743047 .. 3743078 - -10.8   -4.5528   GAAAACGAAGTAAAA      GGATATCCGGCCTG AATT CAGGCCGGATTCAC       TGAGGTTATGTGTTT 100 31
SH07_RS18480 NONE
SH07_RS18475 NONE
SH07_RS18470 NONE
SH07_RS18465 3736716 .. 3736735 -    -8   -2.5076   AACTAGTATTAAGAC            TATCACTT ATTT AAGTGATA             TTGGTTGTCTGGAGA  60 55
SH07_RS18460 NONE
SH07_RS18455 3735386 .. 3735396 -  -3.2  -4.36914   CCTTTCTCGATAAAA                 GTGA CAA CCAC                 TGAGTAAACAGATCA  61 77
SH07_RS18450 NONE
SH07_RS18445 NONE
SH07_RS18440 3734308 .. 3734318 -  -3.2  -5.40072   TTTTGCGTAAAAAAA                 TACC ACA GGCA                 TTAAAAAATCATGAG  79 97
SH07_RS18435 NONE
SH07_RS18430 3733030 .. 3733043 -  -3.9  -4.25283   ATGCGCTCACCAAAA               GTTAA ATTC TTAAC                CATCTTCACGTTTTG  63 518
SH07_RS18400 3728846 .. 3728856 -  -5.4  -3.82205   GTAACAGAGCAATAA                 TGCA TTG TGCA                 AGGTAAACTAAAATA  61 180
SH07_RS18375 3723313 .. 3723327 -  -3.6   -4.8622   GTTTTCAATTAAAAA               TAAAAC AAT GTTTCA               TTTTTAAGTTAAGGA  70 185
SH07_RS18370 NONE
SH07_RS18365 3721533 .. 3721550 - -12.7  -5.29782   TACAGGTATAAAAAA             CCCTGCC ATGC GGCAGGG              TCATAAAAGTAAGAA 100 48
SH07_RS18360 3719807 .. 3719833 - -18.8  -5.30155   CTATTAACGAAAAAA         GGGCCGGATGTA CAG CACATCCGGCCC         GTGAAATCAGACGCC 100 32
SH07_RS18355 3718768 .. 3718796 -  -3.7  -2.93869   CATGATCGTAGAAAC        CCACAGCGCCG CGTCAGT CTGCGCAATGG        TACGGGCGGGGGTAG  45 248
SH07_RS18345 3716699 .. 3716710 -  -3.6  -2.76263   GTCATCATGCAACCA                GCGA CTAA CCGC                 AGTTAAAGCAATTCC  45 28
SH07_RS18335 NONE
SH07_RS18330 3711716 .. 3711741 - -16.3  -3.27475   TCCGGCACCATAAGA         TTAACGCCGGT TAAA ACCGGCGTTAA          ATATTAATGACGGCG 100 29
SH07_RS18295 NONE
SH07_RS18290 3705164 .. 3705174 -  -6.8  -3.68506   GAACAGCGATTGAAA                 TGCG CGC CGCA                 GGTTTCAGGCGCTCC  65 115
SH07_RS18285 NONE
SH07_RS18280 3703396 .. 3703415 - -10.7  -5.44119   CGGAGGGTAAAAAAA            CCGACGC ACACTG GCGTCGG             CTCTGGCAGGATGTT 100 47
SH07_RS18275 NONE
SH07_RS18270 NONE
SH07_RS18265 NONE
SH07_RS18260 NONE
        recC 3698071 .. 3698089 -  -7.4  -2.69471   CTATGTTTATATAAC             CATCAGTC CGT GACTGGTG             CGCATCATAAAGTAA  58 72
SH07_RS18250 NONE
        recB NONE
        recD 3689660 .. 3689704 - -12.9  -4.30978   GGTAAGCGATGAAAA TCGTCGGATGCGACATGCG TAACACT CGTACGTCGCATCCGGCAA TTACGTTTATTCCCG 100 32
        amiC 3686812 .. 3686825 -  -5.9  -5.24129   GTCTCCCATAAAAAA               GCGCC ATTC AGCGC                CTTTTTATCATCCCC  85 33
        mltA 3684938 .. 3684958 - -10.4  -4.93365   CCTCAGAATTAAAAA            GGGCGAGG TTATC CCTCACCC            TAAACGCATAAATGC 100 224
SH07_RS18205 3684070 .. 3684107 - -17.1  -3.59946   GGTTTAAGCACAGAA   CCGGGTCGGATAAGACG TTCG CGTCTCATCCGACCTGA    TTGTTTAACCCTGAC 100 30
SH07_RS18190 3681950 .. 3681969 - -10.7  -2.57423   ATAGTGATTAATGTA            GCACCGC CTAATT GCGGTGC             TTTTTTTTACCTTGC  76 50
SH07_RS18185 NONE
SH07_RS18180 NONE
SH07_RS18175 3679123 .. 3679144 -  -2.9  -3.09635   ATCTGGATGAGGTAA           CGCACATTA TTTC TGATGAGCG            CCAGGTTGCAACTTC  43 100
SH07_RS18145 NONE
SH07_RS18140 3670696 .. 3670707 -  -2.2  -4.74801   GAATCGGACCAAAAA                GC-GC CAC GCAGC                TGCTGGTCGAGTTTC  68 259
SH07_RS18110 3663665 .. 3663676 -    -3  -4.41047   ATGCCTTAAGGAAAA                TTTC ATAT GAAA                 GTTAAGAATTAACAA  61 160
SH07_RS18105 3663242 .. 3663267 - -15.5  -5.84381   GCAGGAATAAAAAAA         GGGAGCACTGT ATTC ACAGCGCTCCC          GGTTCGTTTCGCAGC 100 194
SH07_RS18100 NONE
SH07_RS18095 NONE
SH07_RS18090 3661329 .. 3661347 -  -4.4  -4.93898   ATAGCAGTATAAAAA             GCGCGCCA TAG CGGCTCAC             CGTGCAACAACACAA  74 289
SH07_RS18085 NONE
SH07_RS18080 NONE
        gudD 3657086 .. 3657105 - -11.4  -3.58522   AGCATCAGTCTCAAA            CCGGCTCC AGAT AGAGCCGG             TTTTGGTTTTCTGTC  90 41
        rumA 3652751 .. 3652768 -  -5.5  -2.80816   CCTTTAGGGACCAGA             CCTGCCG AAAT CGGCAAA              TCGCAACTATTTAAC  50 32
        relA 3650463 .. 3650475 -  -6.3  -3.34534   TACAGTATATATCAA                TCTAC ATT GTAGA                TACGAGCAAATTTCG  59 43
SH07_RS18055 NONE
SH07_RS18050 3649800 .. 3649811 -  -2.2  -3.57144   TCTGTCAGGTGGAAA                CCTG TGAC CAGA                 ATAGAAGTGAGTTAG  47 46
        mazG 3648882 .. 3648897 -    -4  -4.43844   TCAGGAGTGAGAAAA              TAGCCCC TTT GGGG-TA              AATGTTTTTGACGCA  66 98
        pyrG 3647062 .. 3647086 - -18.7  -4.07562   GAAACTCCAGACAAA          CAACGCGTACC CAG GGTACGCGTTG          CCGCTCTAACTTTTT 100 44
         eno 3645675 .. 3645694 - -13.6  -5.37345   CTCAACCATAAAAAA            TGCCAGCC CGGA GGCTGGCA             TTTTTAAATCAGATA 100 50
SH07_RS18020 3643764 .. 3643804 -    -5  -4.08279   AGAGGCGACAAACAA TATAAATGAGTAGAAGTCT TTAC AGG-TTCCACCCATTTATA  ACGCTTATAAATGTT  63 44
SH07_RS18005 3638551 .. 3638562 -  -2.2  -4.55004   AAGAGAAAACAGAAA                CCAC CGTT ATGG                 GTTAGCGCACTAAAT  60 27
SH07_RS18000 3637003 .. 3637032 - -11.4  -4.21936   CTGAGAAGCCGAAAA       GGCAACGCCCCG TCATCG CGGAACGCTGCC        TGACACATTATTTTT 100 33
SH07_RS17995 3635622 .. 3635633 -    -3  -3.12668   CTTTAAACGCTAACA                GAAT GTTC ATTC                 GCACCTCCTACATTT  46 1
SH07_RS17990 NONE
SH07_RS17985 3633717 .. 3633739 -    -4  -4.60797   GGGTGACAGAGAAAA           TCCGCCAACC GCT GATTGCCGGT           GGGCTGGTGTGCGAT  70 281
        cysJ NONE
SH07_RS17955 NONE
SH07_RS17950 3626608 .. 3626633 -  -9.7  -5.45802   CTCGCAAAATAAAAA         CGCCCCCATCA TTTC TGACAGAGGCG          TTTAATTTGTCCGGC 100 46
SH07_RS17945 3623540 .. 3623562 -    -7  -4.55128   ACCGGGAAATTAAAA           GAAGATGTAC ATT GTGCACCTTC           CCTACTTAAGTAGGG  76 92
SH07_RS17940 NONE
SH07_RS17935 3621220 .. 3621234 -  -4.2  -3.04598   ATAAAGTTAGACATA               GAAAGG TTT CCTTAC               GCATTTTTGTTTGTG  47 22
SH07_RS17930 NONE
SH07_RS17925 NONE
SH07_RS17920 NONE
SH07_RS17915 NONE
SH07_RS17910 3617510 .. 3617524 -  -4.2  -3.53012   CGCGCGTCTGCGAAA               GCGG TTTATCC CCGC               TGGCGCGGGGAACTC  52 146
SH07_RS17900 NONE
        cysN NONE
SH07_RS17890 3612438 .. 3612455 -  -6.2  -3.15544   TGTTACTTTGACGAA             CCGGGC ATGGAA ACCCGG              TGGTGTCTCAGGATC  57 33
SH07_RS17885 3611977 .. 3612003 -  -4.4  -2.59191   GGATACCGCGACAAC         GCGGGCAAATGT ACC ACATTTGTCCAT         TGTTACGTATACCCA  45 112
        ftsB NONE
SH07_RS17875 NONE
        ispF NONE
        truD NONE
        surE NONE
         pcm 3607847 .. 3607861 -  -2.8   -4.7254   ATCCCCCAGGAAAAA               TTGGTT AAT AACCAG               TGACATAATTACCGT  64 133
        nlpD 3606630 .. 3606642 -  -3.3  -3.35996   TATTCTGACTCATAA                GGTGG CTC CTACC                CGTGATCCCTTGACG  47 73
SH07_RS17845 3605593 .. 3605616 - -14.6  -4.52857   ATTGTGCACAGAAAA          GGCCAGCCTC GCTT GAGACTGGCC           TTTCTGACAGATGCT 100 44
SH07_RS17815 3599241 .. 3599254 -  -3.1  -4.76193   AACGACAACATAAAA               TATGC CATC GCACA                TGCAGATTATCCGGG  71 314
SH07_RS17800 3595501 .. 3595526 - -15.5  -2.79968   GATTTAACTGCAAAT         TGCCGGACAGA TCTG CCTGTCCGGCA          TACTATTCATGAGGT 100 28
SH07_RS17765 3589014 .. 3589028 - -11.4  -3.57263   ACGCCCATCCCCAAA               CAGGCG TAA CGCCTG               CAAAACGGGCAAAGC  89 47
SH07_RS17755 NONE
SH07_RS17750 NONE
        hycD 3585568 .. 3585586 -  -3.7  -2.71263   AACTCTCTTTAATCA             CGCCGCC AGCAA GGAGACG             AACGCTAAAAATGCA  44 4
        hycE NONE
SH07_RS17735 NONE
SH07_RS17730 NONE
SH07_RS17725 NONE
        hycI 3581553 .. 3581577 - -12.1  -2.57136   GCACGAACCATGAAG          GCCCGATAAGC GCA GCGCATCGGGC          AATTTAGCATTTGGC  83 97
SH07_RS17705 3577287 .. 3577317 -  -7.7  -4.77157   GTAATGCAGGAAAAA      CGATGTCATCGACA CTAG TGACGATGACAT-G       TGATGACAATGTTTA  91 38
SH07_RS17700 3576525 .. 3576583 -  -6.7  -3.21099   TCCCGCCATCATGAA TTGCGTAACCCGC-CCTGCCGGACACGAC AGC GTCGCATCCGGCAGTCACAGGTCG-GCGA TACCGCCCGCTCCGT  59 96
SH07_RS17695 3574143 .. 3574174 -   -13  -3.04715   TACTGTGCCTAAAAT      GTCGGATGCGACGC TGGC GCGTCTTATCCGAC       CTACGGGGACGCATG  95 100
SH07_RS17680 3569483 .. 3569500 -  -5.5  -4.15044   CGCTTGCTGAATAAA             GTGCATC ATCT GATGCGC              CGTGACGATGCCATC  67 376
SH07_RS17640 3563523 .. 3563567 -    -5  -5.28778   AGGATTCAGAAAAAA GCTGATTAGCCAGAGGGAAGC TCAC GCCCCCCTCTTGTAAAT-AGC TACTGTACTCGCGCC  82 25
SH07_RS17635 3562905 .. 3562924 -    -8  -2.84098   CTGTTGAAGCAATTA            TACTGTAT GCTC ATACAGTA             TCAAGTGTTTTGTAG  61 26
SH07_RS17625 3561796 .. 3561810 -  -2.8  -2.56715   ATCGCCATTAATTCA               CTGATC AGT GATAAG               CTGTCAAACATGAGA  41 115
SH07_RS17620 3561401 .. 3561430 -  -8.5   -5.1925   TTACAACTTAAAAAA       GCAAAAGGGCCGC AGAT GCGACCCTTGTGT        ATCAAACAAGACGAT 100 193
        recX 3560778 .. 3560822 -  -7.3  -3.56675   CAAGCTAACGAAATA TC-GCCACCAGCTCCAGCGTGT CTTA AC-CGCCGG-GCTGGTAACTGA AAAGTGGGAATAAGA  66 79
SH07_RS17605 NONE
SH07_RS17600 NONE
SH07_RS17595 NONE
SH07_RS17590 3557074 .. 3557084 -  -5.4  -3.27029   CCGTATCAAGTAAGA                 GATG GTG CATC                 CGGGAGGATTACTCG  55 151
SH07_RS17585 3556933 .. 3556943 -  -5.4  -3.28487   CCATATCAAGTAAGA                 GATG GTG CATC                 CGGGAGGATTCGAAC  55 17
SH07_RS17580 3556659 .. 3556669 -  -5.4  -3.28487   CCATATCAATTAAGA                 GATG GTG CATC                 CGGGAGGATTACTCG  55 152
SH07_RS17575 3556265 .. 3556283 -    -6  -3.94933   GCAAGTCGAAAAATA             TGACGCTA CTT TAGCGTAA             TTGCTTGATTTTGTC  66 263
SH07_RS17565 3555666 .. 3555685 -  -3.6    -3.543   CGAGAAAAGCGATAA            CGCTTCACT CAC AGC-AAGCG            AACATCCACGGCGTC  51 14
SH07_RS17560 3555234 .. 3555262 -  -2.4  -2.79831   GTAATGGTGACCATA       TGTGCAGGC-CTA CAAT TAGTGCCACCACA        TCATGCCCTGAACGG  41 12
SH07_RS17555 3553465 .. 3553477 -  -2.6  -3.69283   GAAGCTATCTAACAA                CGGC ATTTA GCCA                CCTCCGGTAATTTTT  50 168
SH07_RS17550 3552902 .. 3552921 - -12.2  -3.50422   ACTAAGTACAACTAA            GCCAGTTC ATTT GAACTGGC             TTTTTTCAATTAATT  91 59
SH07_RS17475 3538121 .. 3538131 -  -8.2  -2.66272   CGGCACGCAAAGTTA                 GCCC GTC GGGC                 TGGATAAAAAATCTG  59 281
SH07_RS17465 3536786 .. 3536823 -  -8.4  -2.59039   AACGAGCTTGAGAAG   CGACGCCGGACG-CGCC CTAGC AGCGACATCCGGCCTCA   GTAATTAGATCAGGA  63 30
SH07_RS17450 3535572 .. 3535591 - -12.8  -3.29649   AGTGTAGCAGAGGAA            CGCGGCGC GTTA ACGCCGCG             GGGATGAGCACAGGT 100 41
SH07_RS17445 3535015 .. 3535036 -  -4.3  -3.07816   GCGCCAGTGAGTTAA           TGCGCCAGC ATTT ACTGACGCC            AATTCCCATTATCCA  48 63
SH07_RS17395 3524284 .. 3524307 -  -4.5  -2.63164   CCACATGTAAGCAAT          TTGCCCGCT TGGCAT AGCAGGCAT           TTTTTCCAGGTACTT  48 217
SH07_RS17385 3523232 .. 3523246 -  -2.9  -2.62098   TAAGTAAACCAACAT               GAAAA TCACT TTTTC               TTATATTATCGAAAA  41 45
SH07_RS17380 3522229 .. 3522252 -  -7.4  -3.77491   CACCAAATAAATCAA          GGGGTTACAT GAAA ACGTAGCCCC           TTTTTCTTTGGTAGT  70 148
SH07_RS17375 3521606 .. 3521623 -  -4.2  -3.45027   ACCGCTCATCAAAGA             CATCAT GATGAA ATGATG              ATATTCCGCATAAGA  52 204
SH07_RS17365 3516853 .. 3516868 - -10.4  -3.92324   CCTGGTAACATGAAA              GCCCAC AGAT GTGGGC               TTTTTCGTTGATGGT  89 40
SH07_RS17335 3510911 .. 3510928 -  -5.5  -4.06904   GTATCTAATTACAAA             GTGACAG AGAG CCGCCAC              GCCAGCGCGGCCAGA  63 1
SH07_RS17330 3510379 .. 3510403 -  -5.5  -3.84406   TCCCTACCATAACAA          CCCTGATTGCC TCC GGCGGTCGGGG          GTTTCTTTTTTCTCC  61 199
SH07_RS17285 3503908 .. 3503918 -  -2.6   -3.3095   AGACATCCGTGACAA                 TTTT GCG AAAA                 TTAAGGAGATGTTAT  46 357
SH07_RS17280 NONE
SH07_RS17275 3499929 .. 3499953 -  -7.2  -2.87325   ATTTTTTACAACAAT          GGCCTTTC TTATGGCTG GAAAGGCC          TGATTTGTTTGTATT  59 160
SH07_RS17255 3496143 .. 3496170 - -12.8   -2.8733   TGTCGGATAAAATAT        TTATCAGCCCAG CTCT CTGGGCTGATAT         TTCTAAAAGATCGCA  91 236
SH07_RS17240 NONE
SH07_RS17235 3492715 .. 3492731 - -12.3  -5.10077   AAAGACGTTAAAAAA              GGTGCTC AAT GAGCACC              TTTTTTCTGTCTGTT 100 39
SH07_RS17215 NONE
SH07_RS17210 3488804 .. 3488829 - -14.7  -4.45544   GCGGAGTAACGAAAA         CGGCCCGGCAT TCGC ATGCAGGGCCG          TGAATTATTACGAAA 100 48
SH07_RS17195 3484946 .. 3484978 -  -9.2  -4.63218   CTTGTGTGAATAAAA     CAACCGGACCCCATC GAGG AACGGAGTCCGG-TG      TCATATTAAAAGCCC 100 218
SH07_RS17190 NONE
        rimM NONE
        trmD NONE
SH07_RS17175 3482868 .. 3482889 - -11.5  -5.51046   CAAACAGATAAAAAA           GGGCCAGCC AATT GGCCAGCCC            TTCTTAACAGGATGT 100 56
SH07_RS17150 NONE
        tyrA 3477649 .. 3477678 - -15.1  -4.28361   CCAACCTGATGAAAA       GGTGCCGGATGAT GTGA ATCATCCGGCACT        GGATTATTACTGGCG 100 32
        rluD NONE
SH07_RS17115 3472953 .. 3472967 -  -5.7  -3.83998   CTACTGGAGATTAAA               TGAGG TCATC CCTCA               ATTATTCAAGGTTAT  63 98
SH07_RS17110 3470310 .. 3470327 - -12.7  -5.04597   ACTTATAGACAAAAA             CGAGCCC CGAA GGGCTCG              TTTTATCATTTACTG 100 35
SH07_RS17105 3468319 .. 3468332 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGTACGCTTCTT  40 34
SH07_RS17100 3468047 .. 3468058 -  -4.4  -4.09503   AAATATATCAAACAA                GACT TAAC AGTC                 TGTTTTGAGATATTG  61 73
SH07_RS17095 3464929 .. 3464942 -  -2.4  -2.78679   GGCCGCCAGGCAAAT               TCTG TTTTAT CAGA                CCGCTTCTGCGTTCT  41 84
SH07_RS17090 NONE
SH07_RS17085 NONE
SH07_RS17080 3462826 .. 3462842 -  -9.4  -3.51032   ATCCTGTAATCACAA              CCCCGT CCTGT ACGGGG              TTTGTTTTTTGGAGG  76 368
SH07_RS17050 NONE
SH07_RS17045 3456194 .. 3456221 - -13.4   -3.5394   AAATTTGCGGGGAAA        TGCCGGATGGCA GAGT TGCCACCCGGCT         GATTTATCAGGCTTT 100 32
SH07_RS17035 3454757 .. 3454780 - -16.8  -5.65513   TATTAACGAAAAAAA          GCGGAAGAGG TCGC CCTCTTCCGC           TTAGTAACTTGCTAC 100 48
SH07_RS17025 3453150 .. 3453169 -  -7.1  -3.80625   TGTCGACAAGTTAAA            TGCCGGG TTTAAT CCCGACA             TTATTTTTATCCAGC  70 32
SH07_RS17010 3450573 .. 3450599 -  -6.6  -3.62775   ACCATGCTCCAACAA         GAAATAGACGAA TAT TACGCCCATTTC         CGCGTCTCAAATAAT  63 190
SH07_RS17000 NONE
SH07_RS16995 NONE
SH07_RS16990 NONE
        rseB NONE
SH07_RS16980 3446049 .. 3446066 - -11.3  -4.32607   GCAAAATGCAACAAA             GCCAGTG AAAT CACTGGC              TCGCGTCTTCCGAAG 100 18
SH07_RS16975 3444026 .. 3444047 -  -5.1  -2.68015   GGCAATCACCAGAAT           CAGGGCAAA CATA TTCGCCATG            CCAACTCCTAAGGGT  49 40
SH07_RS16970 3443027 .. 3443059 - -21.5  -4.07877   TTATCTCATAAATAA      TTCACGTTGTCGCCA TAA CGGCGACAACGTGAA      CGAAGATGGCTATTA 100 38
         rnc NONE
SH07_RS16960 NONE
        recO NONE
SH07_RS16950 3439723 .. 3439738 -  -2.6  -2.71924   TATCCGTGCCTAAAC              CTAATA TTGC CATTAG               CCACGCGCTTCCAGC  41 22
        acpS 3439294 .. 3439330 - -11.6  -4.83759   AATTAAAGTTAAAAA    GTAAAACCCCCGTTCC TTACC AGTTCGGGGGTTTTAC    TTTTTAAAGAGAACG 100 50
SH07_RS16935 NONE
SH07_RS16930 3438805 .. 3438834 - -15.1  -3.78022   TTTATAGTTATTAAA       GGTGCGTCCGACTG GTT CA-CCGGACGCACC       TTAAGTACGTTTCCT 100 45
SH07_RS16915 NONE
SH07_RS16910 3435692 .. 3435708 -  -5.1  -3.28712   CCTCGCTGCGTACAA              TATGGGC TAT GCGCATA              TGCTGGATGCCCGCG  54 408
SH07_RS16900 3430315 .. 3430332 -  -8.4   -5.4492   TACAGACACAAAAAA             GCTCCC GGAGTT GGGAGC              TTATGATAGTGGTTG 100 86
SH07_RS16895 3428382 .. 3428396 -  -2.8  -5.01553   AACTGACAAATAAAA               TAGCCT GAT AGGATA               GGCTGTTAGCATTAT  70 37
SH07_RS16890 NONE
SH07_RS16885 NONE
SH07_RS16880 3425723 .. 3425737 -    -5   -4.3534   CGTGAAGCAGGAAAA               CATTCA TTA CGAATG               CTTTGGCCCGCATAA  67 95
SH07_RS16870 3422813 .. 3422830 - -11.3  -4.00066   GCGATAACGTAGAAA             GGCTTCC CGAA GGAAGCC              TTGATGATCATAAAC 100 186
SH07_RS16860 3418183 .. 3418196 -  -2.5  -3.53012   CGCGTGCCGCTCAAA               TATTA CAGT TAATA                GGGTTTAGTGAACGC  48 30
SH07_RS16855 NONE
SH07_RS16850 NONE
SH07_RS16845 3414525 .. 3414560 -  -3.8  -3.30452   TAACAATACGATTAA    TTTTCATCCCTGCCGC ACCC GCGCCAGGGGCGTTAA     GGTTTAGCGTTTCGC  49 29
SH07_RS16840 NONE
SH07_RS16835 3412512 .. 3412543 - -14.4  -3.44848   CGGCGTTAGGAAAGA      TGCCGGATGCGGCG TGAA CGCCTTATCCGGCA       TTTAATAAATTACAG 100 35
SH07_RS16800 3406737 .. 3406756 -  -3.6  -3.23855   TGTTGCAAAAATAAT            GCGTAA TTATGCCG TTACGC             TTGCCAAACGTTCCT  49 12
SH07_RS16795 3405436 .. 3405449 -  -2.4  -4.13282   AGCAGATCCGCAAAA               TGCT CGAATC AGCA                TGAGGGAACAACTTT  55 20
SH07_RS16775 3401288 .. 3401302 -  -7.8  -3.30124   CTGTAGGCCTGATAA               GACGCA TTA CGCGTC               GCATCAGGCAACGGC  66 43
SH07_RS16770 3400281 .. 3400304 -  -2.4  -2.91593   CATTGCTCTATAAAC          TCCGTACATC ACTC AATGCAAGGA           ATCAGGCTACCGGCT  42 101
SH07_RS16765 NONE
SH07_RS16760 NONE
        iscA 3398258 .. 3398284 -  -8.7   -4.6951   ATCAGGTAAAACAAA        CCCCACGCGCAG GCGA CCACG-GTGGGG         TTATCGGTATGCGCA 100 41
        hscB 3397668 .. 3397679 -  -2.2  -2.78867   CTAATTTGTAATAAG                GCCA TGTT TAGC                 TTCCAGAAATTAAAA  41 35
        hscA NONE
SH07_RS16740 NONE
SH07_RS16735 3395119 .. 3395138 - -12.8  -4.07568   TCCTTCTTTGTAAAA            GGGCCGCC AGTT GGCAGCCC             CAGGATTTTTCCGCT 100 160
SH07_RS16730 3393783 .. 3393794 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG TTTA CGCC                 GCATCCGGCATATTA  64 43
SH07_RS16725 3392806 .. 3392820 - -11.4  -4.10744   CGAGGTAAATAATAA               CCGGAG TCT CTCCGG               CGACAATTTACTGGT 100 99
SH07_RS16715 NONE
SH07_RS16710 3383713 .. 3383726 -  -2.5  -4.09511   AACATTTTTTTAAAA               TAAAA TGAG TTTTA                GCAACAATCAGGGAC  57 49
SH07_RS16705 3383078 .. 3383109 -  -8.7  -5.04249   GGTTGAAAAAAGAAA     CG-CCCCGG-TGAGC GGCT GCTCGTCCGGGGGCG      CTGCATTGTACAAAT 100 86
SH07_RS16700 3381824 .. 3381861 -   -18  -4.42653   ACTTCATTCATAAAA   CATTACGCCACGG-TAC ATAAA GTAACCGTGGCGTAATG   GCTATCAGACCGCTT 100 30
SH07_RS16695 NONE
SH07_RS16690 3379394 .. 3379414 - -13.3  -3.00298   GGGTTCAATCATACA            CGGGAAGCG AGG CGCTTCCCA            TCACGTTATTATTTT 100 34
        hisS NONE
SH07_RS16680 NONE
SH07_RS16675 3376160 .. 3376191 - -13.8  -3.90048   TCGTTGTTAAAAACA      GGAAAACGGCCCCT GTCC AGGAGCCGTTTTCA       AAGTGAACGACAGAG 100 45
SH07_RS16670 NONE
SH07_RS16665 3374262 .. 3374274 -  -7.7   -2.9296   GAAATGCTAACCACA                CGTCT GGA AGACG                GCTGGATAGAAAGTG  58 87
SH07_RS16655 3371312 .. 3371334 - -14.9  -4.33674   AACAGATAATATAAA           TCGCCCGAC ATGAA GTCGGGCGA           AGAGAATCAGGAGCC 100 32
        guaA 3369647 .. 3369666 - -12.2  -5.47159   CTTGAAGATAAAAAA            CCCTCTGT AGTA ACAGAGGG             TTTTGTTCATTCATA 100 54
SH07_RS16630 3367803 .. 3367816 -  -3.9  -3.34629   ATATGAAAGTACCAA               TTGAT ATAT ATCAA                ACAAAATAACCCTGA  49 66
SH07_RS16625 3365396 .. 3365430 -  -9.2  -3.02043   AATCGCCGCTTAATA     CTTTGCGGGCCGAC GAGAAAT GTCGGCCCGCATTA     TTCAGGCACTTTCGC  71 27
         upp 3358946 .. 3358964 -   -11  -5.81412   TTTACTCAAAAAAAA             GCCGACTC TTA AAGTCGGC             TTTAATTATTTTTAT 100 44
SH07_RS16595 3357564 .. 3357614 -  -2.4  -2.72649   AGTTTACCACAGAAT CCCATGATGTTTGAACCGGGCAGC AAC ACTGCCCGGTCGGTACATTATTTG TCTGTTATATCCGCG  40 19
SH07_RS16590 3356392 .. 3356404 -  -2.6  -4.86731   CCTGCTGAAAGAAAA                CGGC GTGGA GCCA                GAAGTGGTGCTCTAC  68 433
SH07_RS16575 3353524 .. 3353553 - -16.5  -4.62872   AGGAACCCTGAAAAA       TCAGCCCGGCGAA ACAG TTCGTCGGGCTGA        AGATTATTCTTGCGC 100 29
SH07_RS16500 NONE
SH07_RS16495 3336541 .. 3336560 - -11.4  -5.34555   TCATATCAGAAAAAA            GGGCCGGA TGAT TCCAGCCC             TGTATTTTTACTTGC 100 33
SH07_RS16485 3335630 .. 3335649 -  -2.8  -2.75074   TGCACGGCAAGATGA            TGAACAGA AAAA TCAGTCCA             GCTGTACACCCAGGC  42 18
SH07_RS16480 3334616 .. 3334632 -  -2.3  -3.75153   GCCCCGGAAGTTAAA              TGCTTTT ACC AAAAGTA              TTGCATTGTGCCGGA  51 4
SH07_RS16475 3332496 .. 3332510 -  -4.2  -2.71055   TTGAACAACAAAATG               GTCATG TTT CATGGC               GAACTCCTTAACTGA  45 96
SH07_RS16470 3331729 .. 3331781 - -14.8  -2.57931   CGTAGGCCGGATAAG GCGTTAACGCCGCATCCGGCAATG GTGAA CGATGCCTGATGCGACGCTCACGC GTCTTATCAGGCCAG 100 53
SH07_RS16435 NONE
SH07_RS16430 NONE
SH07_RS16425 3320057 .. 3320079 -  -4.1  -3.74077   GTTCAGAGATGGAAA           TTACCCTGC AAGCG GCAGAGAAA           TTAGCAGGAGAAGGT  56 417
SH07_RS16410 3314790 .. 3314818 - -12.6  -3.66378   TATATTGCAGCTAAA       CTGCTTACCCTGA ATAT TCAGGGTAAGC-G        TGAGAGTTAAAAAAA 100 42
SH07_RS16405 NONE
SH07_RS16400 NONE
SH07_RS16395 NONE
SH07_RS16390 NONE
SH07_RS16385 NONE
SH07_RS16380 3310861 .. 3310886 -    -9  -3.15182   ATGAAAAAGGAGAGA         GCGTGACGCC CGAATC GACGTCACAC          AGGGTGATTACAGGT  69 33
SH07_RS16375 NONE
SH07_RS16370 3309090 .. 3309106 -  -8.7  -3.55444   CTGTTACTCCTTAAA              CAATGCG AAA CGCATCG              ACTAATACACAGCGA  73 4
SH07_RS16365 NONE
SH07_RS16360 3306893 .. 3306938 -    -9  -3.53811   CGGATGCGGCGTAAA CGCCTTATCCGCCCTACATG TGCAAT CCCGTAGGCTGGATAAGACG CGGCAAGCGTCGCAT  73 148
SH07_RS16355 NONE
        eutA 3304210 .. 3304227 -  -4.1  -2.58544   CTTTAGTTTCATAAG             TCGTTCC CTCA GGAAGGA              AATGCGAGTGATTTC  45 16
SH07_RS16345 NONE
SH07_RS16340 3301920 .. 3301936 -  -2.1  -3.89336   CGAATCAAATCTAAA              GCTGGCA TGA TGCCTCC              TTATCGGGTCATGTT  51 26
SH07_RS16335 NONE
SH07_RS16330 NONE
SH07_RS16325 3299415 .. 3299435 -  -6.7   -3.6682   GTCGAGCGACGGAAA            GCGATGGCC TAC GGCGAGCGC            GAGCGCAATTTCCAG  63 247
SH07_RS16310 NONE
SH07_RS16305 NONE
SH07_RS16300 3296094 .. 3296112 - -10.3  -4.20868   TCCTGAAAATAATAA             TGCCACG CAATC CGTGGCA             TTGTTGAGCGCTATT  91 81
SH07_RS16295 3294940 .. 3294967 -  -8.4   -5.2204   CAGAAGTAATAAAAA        GGCCAGTCAGTA ATGT TACTGGCTGGTC         TGAGAGTGCTGACAA 100 231
SH07_RS16275 3290175 .. 3290187 -  -5.5  -3.06696   CTCCTTGTTAATACA                GAGCG TTA CACTC                CATTCCCTCTGAAAA  52 117
SH07_RS16270 3289323 .. 3289346 -   -11  -3.93038   TAGTTCAAGACGAAA          TCCTCCCCAC AAAT GCAGGGAGGA           AACAGAGGTGAATCA  90 38
SH07_RS16265 NONE
SH07_RS16260 NONE
        cysW NONE
SH07_RS16250 3285195 .. 3285222 -  -9.1  -4.72272   CCTTGCCATTAAAAA        GCCCGGA-TCGC GGGAA GCGCCTCCGGGC        GTTTAACATTCACTC 100 47
        cysM 3284047 .. 3284105 -  -2.3  -5.06103   ACAACTGTTAAAAAA GTGCGCTTTGTTTATGCCGGATGCGGCG TAAA CGCCTTATCCGGCCTACA-AAATCGTGC TAATTCAATATATTG  68 119
        pdxK 3281890 .. 3281907 - -12.7  -4.65895   TGCCGCAGTGAAAAA             TGGCGCC CATC GGCGCCA              TTTTTTTATGCTTCC 100 31
SH07_RS16200 3275726 .. 3275742 - -10.8  -4.67904   CATCAATGCTAAAAA              CCCCCG ACAAG CGGGGG              TTCGAAGAGGAGTTA 100 57
        ligA NONE
SH07_RS16190 3273432 .. 3273465 -    -3  -3.12505   ACGCCAGACCGAACA     GTTACAGGCGCAGC AGGAAA GCAGCGCCGATAAA      GCTTAAAGCGGACGC  46 28
SH07_RS16180 3271138 .. 3271162 -  -7.1  -2.84999   ATCAAACCTATTACA          CTGGCGACA ACGGCTA TGTCGCCGG          CTGGGTTGCAGGTTA  54 320
SH07_RS16170 NONE
SH07_RS16165 3268225 .. 3268247 - -11.3   -4.4648   ACCTTTATCATAAAA           GCAGCTCTG AAGAG CAGAGCCGC           GAATCCTTTTAATGA 100 34
SH07_RS16160 3268024 .. 3268040 -  -2.3  -3.48772   AAGTGCTCCATATAA              TAAATAC ATC GTATTAA              ATTATCATGGCATAA  47 30
SH07_RS16155 3267022 .. 3267036 -  -9.2  -5.17576   CACCAATGTAAAAAA               GCGCCC TAA AGGCGC               TTTTTTGCTATCTGC 100 109
        gltX 3264741 .. 3264763 -   -12  -5.73978   AGCATAAATAAAAAA           CGGCAGGATA TTA TCTCCTGCCG           TTTATCTTTTTACAC 100 46
SH07_RS16115 3263665 .. 3263679 -  -4.3  -2.50816   CGTTTACGTACCAAG               TTTGC TGGGT GCAAA               ATTTGGTGGAGCTAA  45 29
SH07_RS16110 3263539 .. 3263558 - -11.4  -5.43414   AGCAGAGACAAAAAA            CCCCCGCT TTGC AGCGAGGG             TTGGAAATTTGGTGG 100 35
SH07_RS16105 3260994 .. 3261020 -  -3.6  -5.34365   GGAGAATAACAAAAA         TGGTCATCTGGA GCT TACAGGTGGCCA         TTCGTGGGACAGTAT  80 175
SH07_RS16090 3256879 .. 3256910 -   -13   -2.6627   CCAATGGAGCACAAT      GCCTGATGCGACGC TAGT GCGTCTTATCAGGC       CTACAAACCGGCTCT  91 110
         glk 3253951 .. 3253974 - -11.8  -2.81922   TATGATTTAAAAGAT          TATCGGGAGA GTTA CCTCCCGATA           TAAAAGGAAGGATTT  83 39
SH07_RS16065 NONE
SH07_RS16060 NONE
SH07_RS16055 NONE
SH07_RS16050 3250012 .. 3250027 -  -3.3   -3.0644   ATTGAATCGTTAACA              TAACC GCTCCG GGTTA               ATCAGGAGATCATCT  44 35
SH07_RS16045 3247165 .. 3247176 -  -5.8  -3.02144   GTAGCGTGGTGAATA                TGCC GCCG GGCA                 ATTCGCAGCCGCGCG  53 366
SH07_RS16025 3242542 .. 3242561 - -13.6   -4.8622   CTGTGCAATGAAAAA            CAGGAGCC ATCA GGCTCCTG             TTTGCATTTCTGACG 100 48
SH07_RS16015 NONE
SH07_RS16010 3240346 .. 3240356 -  -5.4  -5.15381   AAGAGACTGAAAAAA                 CATC AGC GATG                 ACGACCACACACTCT  83 154
SH07_RS16000 3239203 .. 3239239 - -11.9  -3.92542   GCGAGCGCCAAATAA    TTTTATGACCACAAC CTGTCGT ATTGTGGTCATAAAA    AATTGTCGGCTGGAG 100 80
SH07_RS15995 3237506 .. 3237524 -  -4.4  -2.94161   GAAATTTTTATAAAT             TGGGAGCC AGA AGCCCCCG             TTAATATCAGATGGC  47 32
SH07_RS15990 3235731 .. 3235771 -  -3.1  -3.30441   TAGTATTTCCGATAA  GGGTCCCCTCACCATCGCA TAA TGAGTTGGCAAGAGGAGAC  GATGTCAGTATTTAA  47 37
SH07_RS15985 3234716 .. 3234740 -  -6.5   -5.0133   TATGCCTTGAAAAAA         GCCGAAG-GT GAAAAG ACACTTCGGC          ATTTATGTAAAATCA  84 54
SH07_RS15980 3233382 .. 3233396 -  -6.4  -4.09519   ATCAGTTAGAAATAA               CACCTG TTT CAGATG               ACAGTAAGCCTGAAA  68 179
SH07_RS15965 NONE
        emrB 3225941 .. 3225988 -  -7.1  -3.22884   TCAGTAAGTTACCAA CAGATGCACGGTTTCAGCGCAG AACAA CTGCG-TAATACCACTCATCTG GTGTGGGCGACGGGA  57 202
SH07_RS15945 3222087 .. 3222120 -  -7.4  -3.36289   CACCATTCCAATCAA     TCCCCTGCTG-CTTC AAGTA GATGTCTGCAGGGGA     CACCATCCTTGTGTT  64 126
SH07_RS22875 NONE
SH07_RS15900 NONE
SH07_RS15895 NONE
SH07_RS15890 NONE
SH07_RS15885 3216440 .. 3216454 -  -7.1  -2.86747   GATGCAGCAGAAGCA               CAGCG CCAGT CGCTG               ATTGATACTGCAATG  54 174
SH07_RS15845 3209743 .. 3209762 -  -7.9  -5.68489   GATAACAACAAAAAA            GGTGAGT TTTGCG ACTCACC             TTTTTTATTTGTTTC 100 41
SH07_RS15830 3206132 .. 3206158 - -20.2  -5.26907   GAAGAGAAAAGAAAA         CGCCCCTGCCAG CAA CTGACAGGGGCG         TACGTACCCGAGAGG 100 43
        fadI NONE
        fadJ 3202473 .. 3202496 -  -4.6  -2.90571   AATGGCGTAAGTATA          GTCAATATGC GTTT ACATTTTGAC           CAACACTCCGCCATT  50 70
SH07_RS15815 3201809 .. 3201841 - -14.4  -3.21099   CTGCCTGATGAGCAA      TTATGCCCAATGAA TCTAC CTCATTGGGCATAA      TTTGGAACTCATCAG 100 37
SH07_RS15810 3200578 .. 3200601 - -13.2  -3.42684   AAATCCATTTAAATA          CCCCATAGCA GTGT CGCTATGGGG           GTATGCCTTACAGGT 100 33
SH07_RS15805 NONE
SH07_RS15800 NONE
SH07_RS15795 NONE
SH07_RS15790 NONE
SH07_RS15785 NONE
SH07_RS15780 3194334 .. 3194345 -  -3.6  -3.45027   AGCCGTTATTAAATA                CCGA AGGT CCGG                 TGAAATATGTTCGCC  51 434
SH07_RS15770 NONE
SH07_RS15765 NONE
        mepA NONE
SH07_RS15755 NONE
SH07_RS15750 NONE
SH07_RS15745 3189371 .. 3189385 -  -7.1  -3.30124   GTGTAGGCCTGATAA               GACGC GATAA GCGTC               GCATCAGGCATGCTG  64 57
SH07_RS15735 3185814 .. 3185831 - -11.3  -4.64598   CAATGATGTGAAAAA             GGGAACC ATCA GGTTCCC              TTTTGCGTTAGTGCC 100 105
SH07_RS15730 3184011 .. 3184022 -  -4.4  -2.83522   AGCTGGTGACCAAAC                TTGC GGCG GCAA                 CGGGGGAACCCAGCA  46 471
SH07_RS15720 3182201 .. 3182228 -  -7.7  -4.04579   TCCAGAAATAGCAAA        GCTCCCTGCCA ATGTTA CAGCAGAGAGC         ATGAAGAAGAGATTA  74 38
SH07_RS15715 3181165 .. 3181182 -  -4.1  -2.62184   GCTGGTCGGACATTA             GTACAGA TACT CCTGCAC              CAGTTTCTCGGCGAT  45 5
        truA NONE
SH07_RS15705 3179584 .. 3179596 -  -3.3  -5.24531   ACTTTGGATAAAAAA                GTGGT CGA ACCGC                GGAGTTACTTTTTAT  75 37
SH07_RS15700 3178505 .. 3178527 -   -17  -4.46656   GTGAGAATAGCAAAA           GGGCAGAGCC AGT GGCCCTGCCC           TTATCAGTTATCAGG 100 36
SH07_RS15695 NONE
SH07_RS15690 3176392 .. 3176417 -  -9.8   -5.1356   GCGCATCAATAAAAA         TGGCGCTGAA AAAATA TTCAACGCCA          TCGACTTTTTATGCC 100 156
SH07_RS15685 3175800 .. 3175816 -  -2.9  -2.64243   CCACATCTCAGAGCA              CTTACGC TCT GGGCAAG              AAACTTGACGAGCTT  41 10
SH07_RS15680 3174216 .. 3174234 - -12.4  -2.53263   GGGAGTTGCAAGTCA             GGGTGCCA GAC CGGCACCC             TCAGCGAAGGCATCA  86 38
SH07_RS15675 3173556 .. 3173574 - -13.2  -4.07687   ATCGCGGTTGCAAAA             TTGCCCTG AAA CAGGGCAA             CAGCGGAGTTATGCG 100 34
SH07_RS15670 3172384 .. 3172394 -    -4   -4.3739   TATCGTGCCATAAAA                 TTGA CCA TCAA                 GGCAAAATATCCCGC  63 166
SH07_RS15665 NONE
SH07_RS15660 NONE
SH07_RS15655 NONE
SH07_RS15650 3169232 .. 3169255 - -12.4  -3.73042   TTCCCCATGAAAATA          CTCCGGCAGC GTTA GCCACCGGAG           AGGAAATTATTTCAG 100 32
SH07_RS15645 3167651 .. 3167691 -  -6.8  -3.93583   GAATTTACCCATAAA CTCTGCGCTC-GCTGGGAA GAAA TTGCCTGCCGGGCGCAAAG  TGACAAAACGCGAGT  68 509
SH07_RS15625 NONE
SH07_RS15620 3164771 .. 3164785 -  -3.5   -3.2115   TAAATTACGGATTAA               TCGCG ACCTG CGCAA               TGATACTTTGATCAT  48 0
SH07_RS15615 3164139 .. 3164152 -  -9.5  -3.17553   CTAAAAATGTTAAGA               GCCGC AATT GCGGC                TCTTTTTTCATTCTG  72 33
SH07_RS15595 3158695 .. 3158710 -  -3.3  -3.45707   TAAAGATTCAAAAAT              TTGTG CAAATT CACAA               CTCAGCGGGACAACG  49 42
SH07_RS15590 3158159 .. 3158177 -    -6  -5.76949   TACGGTGAAAAAAAA             GAAGGC TGAGTAT GCCTTC             TTTTATATGCGTAAT 100 51
SH07_RS15585 NONE
SH07_RS15580 3156928 .. 3156945 -  -9.8  -5.24129   TTCTGCCATAAAAAA             GCCCCG ACGAGA CGGGGC              TAAATCATGATCAGG 100 45
SH07_RS15575 3154683 .. 3154693 -  -3.2  -5.09225   AGGCTATTGAAAAAA                 TCGC TCA GCAA                 AAACTGGTCGATATG  77 378
SH07_RS15560 3151154 .. 3151183 -   -15  -5.86061   TTTTACTAAAAAAAA       GCCGCTGGGGTT TAAAAC ACCCCCAGCGGC        TCGTTTTTTACACTA 100 71
SH07_RS15555 NONE
SH07_RS15550 NONE
SH07_RS15545 NONE
SH07_RS15540 NONE
SH07_RS15535 NONE
SH07_RS15530 NONE
SH07_RS15525 NONE
SH07_RS15520 NONE
SH07_RS15515 NONE
SH07_RS15510 NONE
SH07_RS15505 3138591 .. 3138603 -  -5.5  -4.08216   TTATTCCTTGTAAAA                GTCCC GTC AGGAC                CGGATTTTCAACGAA  65 153
SH07_RS15500 NONE
SH07_RS15495 3135531 .. 3135549 - -11.7  -4.82901   TCTTTTTCAGAAAAA             CCGCCGA GCATG TCGGCGG             CTTTCTGACTTACAA 100 50
SH07_RS15480 3133108 .. 3133123 -  -4.7  -3.28001   CATTGTTAAATGCAA              TACCG TATATT CGGTA               TGTAACAGCGATATC  53 138
SH07_RS15465 3129467 .. 3129500 - -22.7  -3.35073   ATCATTGTTAATTAA     TTCGACCAGTCAGCA AATA TGCTGACTGGTCGAA      CATAGTTTGCTAAAC 100 46
SH07_RS15450 NONE
SH07_RS15445 3126204 .. 3126234 - -13.4  -2.85847   AAGCCTCACATTATA       CGGGGTACTACA AAAAAAA TGCAGTACCCCG       GTGTAGGGAGGTTTT  93 39
SH07_RS15440 NONE
SH07_RS15435 NONE
SH07_RS15430 NONE
SH07_RS15425 NONE
SH07_RS15420 NONE
SH07_RS15415 3119114 .. 3119128 -  -5.8  -3.23045   ATTTACAGATTAACA               GATAAA CTC TTTATC               AACGGCAATGGAATG  55 71
SH07_RS15410 3118628 .. 3118642 -  -2.1  -3.88985   AAAACGCTTCATAAA               CTTGC GCTAA GCAAA               GCCTATGCCTTGCTC  54 181
SH07_RS15370 3110512 .. 3110533 - -13.1  -2.93073   CTTCTGTAACAATGA           TGACAGCCA TTAC TGGCTGTCA            GATTGAAAATTTAGT  95 36
SH07_RS15360 3109229 .. 3109251 - -11.2  -3.38832   TAGTAAGAAACTGAA           TGGCGCGACA GAA TGCCGCGCCG           GAAGGGATCAGAAAC  81 33
SH07_RS15355 3107938 .. 3107954 -  -7.9  -3.72576   TGCCGGTGCAGTAAA              CCGGCAC AGA GTGGCGG              AATCAGACAGATAAG  70 28
SH07_RS15350 NONE
SH07_RS15345 3105698 .. 3105731 -  -8.1  -3.21772   AAGCTCCTTAGAATA     TGTGGGCGTTACCGT TGTC ACAGCAACGCCCGGA      GTGATTAGTGGCTGT  63 30
SH07_RS15340 NONE
SH07_RS15335 3103533 .. 3103565 -  -7.7  -3.43553   ATAACCACTAATTAA      CACAGGCCCACAG CCGATCC CCATGGGCCTTTG      ATATCAATAACTACC  68 29
        glpT NONE
        glpQ 3095428 .. 3095453 - -15.5  -2.86743   AAATTTGATATGAGA         CAGGATGGCGC ATGA ACGCCATCCTG          CAGTAACATTACTCT 100 34
SH07_RS15290 3094246 .. 3094271 -  -7.6  -3.53811   TTCAGCCGGGGGAAA         TTTTGCCCTG TTGTTG CCGGGCAAAA          GGCGATATTGAAATC  68 103
SH07_RS15265 3085901 .. 3085912 -  -7.2  -3.30124   CCGTAGGCCGGATAA                GGCG TTTA CGCC                 GCATCCGGCAACCGT  64 57
SH07_RS15255 3082247 .. 3082268 -  -8.7  -4.55023   CCTAATACGACAAAA           GCCCAGACT TTGC AGCCTGGAC            TTTTCAATTCAAACA  93 77
SH07_RS15250 NONE
SH07_RS15245 3079828 .. 3079850 -  -6.3  -2.53894   ATCAGCATTAGCAAG          CCCTGTTCCC ACAA GAG-ACAGGG           ACAAGCACGCTGCTA  53 38
SH07_RS15240 NONE
SH07_RS15235 NONE
SH07_RS15230 NONE
SH07_RS15225 3072821 .. 3072865 - -13.2   -3.3482   GAACGGTTGAATTAA TCAATAAAAACACCCGATAGC GAAA GTTATCGGGTGTTTTC-TTGA ACATCGACGGCGAAG 100 54
SH07_RS15190 3062491 .. 3062543 - -12.7  -2.59298   TAGGCCAGATAAGAC GCGTCAGCGTCGCATCTGGCATT TGCACTG AATGCCGGATGCGGCGTAAACGC CTTATCCGTCCTACG  88 36
SH07_RS15175 NONE
SH07_RS15170 3058542 .. 3058553 -    -3    -3.965   GGTTAAAATCAATAA                CTTA TTCT TAAG                 TATTTGACAGCACTG  56 7
SH07_RS15165 3057138 .. 3057151 -  -9.5  -5.43514   AAAACAATGAAAAAA               GGGCC CGCA GGCCC                TTTGTTCGATATCAA 100 47
SH07_RS15160 3055954 .. 3055967 -  -2.3  -2.70932   CTCCCTGGTTAAGGA               TAGCC TTTA GGCTG                CCCGGTCACCATCAC  40 64
SH07_RS15155 NONE
SH07_RS15150 NONE
SH07_RS15145 3052458 .. 3052488 -    -9  -2.79183   GGGATTTTTAGCATA       TTGACCTGACGG CAGCAGT CCGCCAGGTCAG       CGTCGTAATATTATG  67 36
SH07_RS15140 3050597 .. 3050629 - -26.5  -2.82516   CGTCTTATCAGCATA      CGCCACATCCGGCAT ACC ATGCCGGATGTGGCG      TATCATTACAACGCA 100 31
SH07_RS15125 NONE
SH07_RS15120 NONE
SH07_RS15115 NONE
        napG NONE
        napH NONE
        napB NONE
SH07_RS15095 3043176 .. 3043186 -    -4  -3.09193   AGCATACCCACGCAA                 TAAC CCT GTTA                 AAAACCTGGCTCGAC  49 23
SH07_RS15090 NONE
SH07_RS15085 3041886 .. 3041912 -  -3.1  -2.59883   AAAATCAGTAATCCA        GCGTTATTGAAT GCTG ATTCG-TAACGC         TGCCGCCGTCGCAAA  42 2
SH07_RS15080 NONE
SH07_RS15075 NONE
SH07_RS15070 NONE
SH07_RS15065 NONE
SH07_RS15060 3037932 .. 3037944 -  -3.3  -5.07486   CACGCCCAATAAAAA                CCTCA TTG TGCGG                CCTCCTTACTGTATT  71 15
SH07_RS15055 3036678 .. 3036704 -    -8  -5.18726   GGGGCACAATAAAAA         TAGCCCGATG GATTTAT CATCGGGCTG         AGATTTATGACAAAC  95 206
SH07_RS15045 3035733 .. 3035746 -  -2.4  -2.73701   TCCTATGAAATTAAT               TGCT GTTAAA AGCA                TTGGGTACAGAAAAT  41 17
SH07_RS15040 3034545 .. 3034556 -  -2.2   -2.7186   AAATGCCTTGAATCA                GCCT ATTT AGAC                 CGTTTCTTCGCCATT  40 61
SH07_RS15035 3031832 .. 3031848 -    -8   -5.4756   AATCCCAAGAAAAAA              CCAACC CTTAC GGTTGG              TTTTTTTATATCTGC 100 94
SH07_RS15015 3028351 .. 3028366 - -11.8  -5.06103   ATAAGTTGTAAAAAA              CCCCGC TCCG GCGGGG               TTTTTTGTATCTGCA 100 126
SH07_RS15000 NONE
SH07_RS14995 3024064 .. 3024081 -  -7.7  -4.26202   ACATGCATCAACAAA             GGAAGCC TTTT AGCTTCC              TCGTTGTGCAATAGA  79 41
SH07_RS14990 3023081 .. 3023101 -    -6  -3.37487   TTAGATCCTGAAACA            CGCCACCG TTATC CGGCGGAG            TTCTCTGGTGGTCAG  56 344
SH07_RS14935 3010187 .. 3010208 -  -2.9  -2.71712   CGCCGGGCTGGAAAT           CCCGACGAT GTTG ATTGCCGGA            TATTTCGCCAAACGT  41 385
SH07_RS14925 NONE
        fruK NONE
SH07_RS14915 3005204 .. 3005236 - -14.3  -3.72576   TTTGCGCTCATCAAA      TGTTACAGGACAGGA AAT TTCTGCCCTGTAACA      CACCTTTTATTACGC 100 35
SH07_RS14910 NONE
SH07_RS14905 3002889 .. 3002906 - -10.5  -3.54424   CTTCATGCCGGTAAA             CCCGGCG TCAG CGCCAGG              TTTTGGTATGCTTGA  80 75
SH07_RS14900 3001118 .. 3001140 -  -4.1  -3.57808   GTTAATCGATAAAGA          CCATGAACCG CGTG CGGTGCA-GG           CTATTGAAGAGTGTT  53 497
        rihB 2999725 .. 2999760 - -11.8  -3.96148   TCTGCCCATCAGAAA    TAGCCAGGCCTGCATC TTGC GATACCGGCCCGGCTT     GTTATCAACACTTAA 100 37
SH07_RS14885 2998319 .. 2998360 -    -8  -3.63569   CCAATGGTGTAACAA TGT-TGCCGGATGCGACGC TTAAC GCGTCTTATCCGGCCTACA AATCAGGCAATTTCA  70 87
SH07_RS14865 NONE
SH07_RS14860 2992549 .. 2992568 - -13.6  -4.75776   AATGGAATTGAAAAA            GCCCTCTC GGTT GAGAGGGC             TTAGCAAGGAAGGGA 100 47
SH07_RS14855 2990276 .. 2990298 -  -3.3  -3.76952   TTTACTGAAGTGAAA          GTCCGCCCGG TTCG CCGGGCAT-C           TTCTCATCAGAAGCG  53 32
        folE NONE
SH07_RS14835 NONE
SH07_RS14825 2986054 .. 2986065 -  -4.4  -4.08767   GTTACCTCGGCAAAA                GTGA TTAT TCAC                 TGTTACATACGGGTT  61 115
SH07_RS14820 2984846 .. 2984868 - -14.9  -3.88232   TTGGCCATACAATAA           GGGCGCAGT AATAG ACTGCGCCC           AATCAGTCTTATTTC 100 34
SH07_RS14815 2983153 .. 2983166 -  -2.3  -3.05384   TTGCCCGGCATCCAA               CGCCA TTCA TGGCC                ATATCAATGATTTTC  42 158
SH07_RS14810 2982534 .. 2982559 -  -6.1  -3.39772   TTAAAGGTGCAAAGA         CGCAAGACGCA GAAT TTCGTTTTGCG          TTGTTGTTTTTGTAT  59 111
        mglC 2981260 .. 2981293 -  -8.9  -3.10533   TTGTAAAACCAGAGA     CGCATCCGGCA TTTGGTTCCTGT CGCCGGATGCG      GCTTGAACGCCTTAT  69 225
SH07_RS14765 2973921 .. 2973960 -   -20  -2.71364   TCACTGGCGCAAGGA  GCGCGCAGGGGGCGGC CAATCGCC GCCGCCCCCTGCACCC   CCGGGCTCTGGCGAA 100 253
SH07_RS14755 NONE
SH07_RS14750 2971111 .. 2971125 -  -5.6  -5.06816   ACGCGGGAAGAAAAA               GCCGGA TCA TCAGGC               GTAAAACCATTGCCC  82 159
SH07_RS14740 2969747 .. 2969780 - -14.7  -2.84527   GAATCGTGAGGAAAT     GCTGCATTGCTGACA TTTA CGCCAGCAATGCAAC      GTCAAAGAACTTTCT 100 39
        pbpG 2968654 .. 2968682 -  -7.6  -4.74801   GAAGTGGAGTAAAAA       TTACGGATGGCAGA GTA TC-GCCATCCG-AA       TTCACTTAATCGTTC  91 31
SH07_RS14725 2964412 .. 2964430 - -12.4  -3.86015   TATCCGGCCTACAAA             GGGCGCAA ACG TCGCGCCC             TTACTAAAGCATTAC 100 37
SH07_RS14720 NONE
SH07_RS14715 NONE
SH07_RS14710 NONE
SH07_RS14705 2960297 .. 2960312 -  -3.2  -3.27923   GCCCAACAGCAGCAA              CTCACC AGTT GGCAAG               AACAAGGCCATGATA  47 208
SH07_RS14690 NONE
SH07_RS14685 2956976 .. 2956986 -  -3.2  -4.68593   TTGATGAGGCAAAAA                 GCCA TTT TAGC                 AGTCTTTTACAGGCC  65 32
SH07_RS14680 2956068 .. 2956094 -    -8  -4.29073   GAAGAATCGAAGAAA         TTCAGCGCCAAT CTG AACGGCACTGAA         ATTGCCATTACCTAT  76 407
SH07_RS14625 2937747 .. 2937779 -  -9.9  -3.80855   TGCGGCAAAAACTAA      TACACCGCATCAATG TAA CATCTCTGCGGTGTA      TGAAGAATAACCAGA  84 55
SH07_RS14620 2937203 .. 2937232 - -16.7   -5.5353   GATATCAATAAAAAA       GCCGAAATCATTT ATAT AAATGATTTCGGC        TTTCTAAATGCAATT 100 58
SH07_RS14610 2936373 .. 2936393 - -13.3  -4.54727   CCTCTTAAATTAAAA            GGCCGCCAT GGG ATAGCGGCC            ATGTTTATTACCTGG 100 62
SH07_RS14605 2935662 .. 2935674 -  -3.3  -3.07895   GTCATTCTCAACATA                GGCAG CTC CTGCA                ATTAAATTTTGTCAC  46 27
SH07_RS14600 NONE
SH07_RS14595 2932054 .. 2932074 - -11.1  -5.42259   TCATCGCTAAAAAAA            GCCCCCTCA TCA TGAGGGGGA            AATGCAGACACCTTG 100 81
SH07_RS14580 2930084 .. 2930095 -  -5.8  -2.72013   ACGTGAAGAAGCAAT                GACC TGGT GGTC                 CGTGACTTCCCTACG  52 204
SH07_RS14575 NONE
SH07_RS14570 2928460 .. 2928474 -  -3.5  -2.66008   AAAGCAGCTATAGTA               CGGTG CTCAC CACCA               GGCGTGGAAGTGGTG  44 17
SH07_RS14565 NONE
SH07_RS14560 NONE
SH07_RS14540 2922078 .. 2922099 - -13.7  -5.58209   TGAAAGGCAAAAAAA           CGGCCTCCC GATA GGGAAGCCG            TAGCAAAGTGCGCGT 100 188
        gatY 2921090 .. 2921111 -    -8  -2.71712   TTTTCCTTGTTAAAT           GGCAGGTGC GTTAT GC-CCTGCC           CTCGCAGCCACAATC  60 14
SH07_RS14530 NONE
SH07_RS14525 NONE
SH07_RS14520 NONE
SH07_RS14515 2917676 .. 2917686 -    -4  -3.26405   CTCAGGTAAAAATTA                 TTCT GCG AGAA                 CGACTTTCTCTTGTT  51 12
SH07_RS14510 2916556 .. 2916580 - -13.5  -3.21276   CTGTTTTGCACAATA          CCGGGCCAGCA TCA CGCTGGCCCGC          GGTTTCAGGGAATGA 100 30
SH07_RS14505 2916135 .. 2916145 -  -3.2  -4.24123   GGAACAATTTGAAAA                 CAAG AAC CTCG                 CTTAGGCCTGTGTCC  58 60
SH07_RS14490 2914394 .. 2914438 -   -13  -3.39595   TTGAACCAGGGAGAA TCCGTAATGCCGGATGCGGTG TAAA CACCTTATCCGGCA-TACAGA ACAATACTACACCGT 100 32
SH07_RS14480 NONE
SH07_RS14475 2912023 .. 2912040 - -12.7  -5.29782   CACATCGACAAAAAA             GCCCCTC GACT GAGGGGC              TTCCTGTTTCTAATT 100 472
SH07_RS14425 2897212 .. 2897233 -  -8.7   -2.7035   TTGATGCATAGACCA           GACGCCAGC TCAC ACTGACGTC            CAGCCTTTTGGCGCT  66 13
SH07_RS14420 2896425 .. 2896454 - -12.3  -2.73243   ATTTATTGTTTAAAC       TGGCGGTTGAA TTGTTGTC TTCAACCGCCA        TGAGAAACTCACTCT  88 34
SH07_RS14410 2893358 .. 2893384 -  -8.6  -2.70932   TCGTCTGCTTAACGA         TCTGGTACGCGA TGC CCGCGAACCGGA         AAAAGTGGCCCTGTT  60 432
SH07_RS14400 NONE
SH07_RS14395 2891415 .. 2891426 -  -3.6  -3.30124   CCCCAGGCCGGATAA                GGCG CTCG CACC                 GCATCCGGCGACCAA  49 43
SH07_RS14385 NONE
SH07_RS14380 NONE
SH07_RS14375 2884058 .. 2884070 -  -4.1  -4.72272   CCGCTGGATGAAAAA                CGTGA ATA TCACA                CCATTGCCGGGCTGT  70 466
SH07_RS14365 NONE
SH07_RS14360 NONE
SH07_RS14355 NONE
SH07_RS14350 NONE
SH07_RS14345 NONE
SH07_RS14340 NONE
        wcaD NONE
SH07_RS14330 NONE
SH07_RS14325 NONE
SH07_RS14320 NONE
SH07_RS14315 NONE
SH07_RS14310 2870502 .. 2870514 -  -6.2  -2.58861   CAGTATTTTCATAAT                CCGG GTACT CCGG                TACGCTTCTCAGCGA  54 6
SH07_RS14305 NONE
        cpsB NONE
SH07_RS14295 2866354 .. 2866382 -  -2.4  -3.14878   TGGGGTAAGGGAAGA        TCCGACATTACT CGTTC AGCAACGTCAGC        AGAGTTCGCGTTCGC  43 4
SH07_RS14290 NONE
SH07_RS14285 2863287 .. 2863333 - -15.1  -2.62463   CGTAGGACGGATAAG GCGTTCACGCCGCATCCGGCA TTCAG TGCCTGATGCGACGCTGACGC GTCTTATCAGGCCTA 100 124
SH07_RS14280 NONE
SH07_RS14275 2860666 .. 2860678 -  -5.5  -3.85698   GTTCTCCTCTATAAA                GCCTG CAG CAAGC                TGGCGAGTTCTCGAT  61 6
        wcaM NONE
SH07_RS14265 2858091 .. 2858146 - -18.7  -4.52857   ATGGTTTATATAAAA CAACGGCAG-GAAGATTCGCAACAAA TTACT TTTGCTGCGAATTTTCACTGCCGTTA TAATTTTCTTATCAA 100 65
SH07_RS14260 NONE
SH07_RS14255 2855794 .. 2855818 -  -2.2  -2.52543   ATTCCTTTTAATTCA          TCTTGCTC CACCATCAC GAACAAGA          TGCAAAAACTATTAA  39 37
SH07_RS14250 NONE
SH07_RS14245 NONE
SH07_RS14240 NONE
SH07_RS14235 NONE
SH07_RS14230 NONE
SH07_RS14225 NONE
SH07_RS14220 NONE
SH07_RS14215 NONE
SH07_RS14210 NONE
SH07_RS14205 2846225 .. 2846239 -  -2.8    -4.323   GCTAAATATCTAAAA               GTACTT TTT AAGTGC               CATCTGAAGGCTTTT  59 434
SH07_RS14200 2844565 .. 2844587 - -11.2  -5.75945   ATTTGGCAAAAAAAA           GCCCGGTGCA ATA TACGCCGGGC           CTCAATTTTATTGTT 100 53
SH07_RS14195 2843169 .. 2843189 -  -8.3  -4.09554   AGTAACAAAAGACAA            TCAGGGC GTAAATA GCCCTGA            TAACAAGATGTTAGT  79 36
SH07_RS14190 2842027 .. 2842052 - -11.1  -5.41143   CATCCGGCAAAAAAA         CGGGCAAGGTG TCAC CACCCTGCCCT          TTTTCTTTAAAACCG 100 47
SH07_RS14145 NONE
SH07_RS14140 2833978 .. 2833994 -  -8.1  -3.53184   TATCAAAACTGACAA              TTCATTC TAT GAATGAA              TCTGTTCAATAATGA  68 31
SH07_RS14135 2833051 .. 2833074 -    -3  -2.87344   CAGTGGTTTCATACA          CGCCCCCTTGC AGT GCATGCGG-CG          TCCTGCTGGCGTGAT  43 44
SH07_RS14130 2832009 .. 2832029 -    -9  -4.72473   TGAAGCAAAAAATAA            CCGACGCT GATGA AACGTCGG            TTTTTAGTCATTTTT 100 114
SH07_RS14125 2830445 .. 2830472 - -12.8  -6.04419   AAAAGAATAAAAAAA        CCGGAGCCAAAT GTTC ATTCGACTCCGG         TTTATTATTAGAAAA 100 46
SH07_RS14120 NONE
SH07_RS14115 2828564 .. 2828579 -  -3.2  -4.08064   AATTCTGCGTGAAAA              TCCGCA AGTG CGCGAA               AAAGTGGTGGCGATA  58 461
SH07_RS14105 2826136 .. 2826151 -  -3.2  -2.80113   GATTATGCGAGCAGA              CTCGCA CTCC TGCCAG               TCTGCTGCAAAAGAA  43 44
SH07_RS14100 2825465 .. 2825487 -  -6.3  -3.92373   TATCCGACGGACAAA           CCGGGAA CAGTGTAAT TTCCCGG           CAGGAGCGAAAAAAT  67 116
SH07_RS14095 2824306 .. 2824320 -  -2.8  -2.78495   GCAGCAGCAAGATGA               TTCTGA AGT TCAGGA               ATTATTTGCGCAAGG  42 27
SH07_RS14090 2823778 .. 2823808 -   -17  -2.91042   GATAAGAATCAATGA       GCAATGAGGGTTGC CGG GCAACCCTCATTGA       ATAAAACGGGAATTA 100 38
SH07_RS14030 NONE
SH07_RS14025 2813534 .. 2813550 -  -6.5   -3.4409   AACAAAAATCAGCAA              CGAAGAG ACG CTCGTCG              TGACCACGAATCGTT  61 216
SH07_RS14020 2812081 .. 2812093 -  -3.3  -3.22476   ATGACTCATGATGAA                CCCTG TTC CATGG                CTCCAGATGACAAAC  46 149
SH07_RS14015 2810601 .. 2810611 -  -3.2  -3.97511   CATTGAACAGAACAA                 TGGA TCC CCCA                 CCGTTGCTGACCGCA  56 508
        cobU NONE
        cobS NONE
        cobT 2808138 .. 2808156 -  -3.1  -3.54424   TCCTATGTCGCGAAA             GCTATCC GTTAA GTATAGC             TTTTATCAGACTTTT  49 46
SH07_RS13990 2807136 .. 2807153 - -11.3  -5.22039   GCCAAATTCAAAAAA             GCCTGCT TTCT AGCAGGC              TTTTTGCTTTCTAAT 100 52
SH07_RS13980 NONE
         cbl 2804729 .. 2804745 -  -9.4  -3.07283   CAAATTCCTGAAAAG              CCCGCT TTTAT AGCGGG              ATTTTTGCTATATCT  72 33
SH07_RS13965 2802893 .. 2802904 -  -4.4  -3.35278   TGAACTACAGAGGAA                TCGT GAGA ACGA                 GGCGAATATTAGCGA  51 113
SH07_RS13960 2802725 .. 2802753 -  -9.6   -5.4387   ACAGAAATCAAAAAA        CCCGGTCACTTT TTTAC AAGGTAACCGGG        TAAAAATAATTTTTA 100 88
SH07_RS13940 2796826 .. 2796847 -  -4.3  -3.58533   TTATAATTTCTTAAA           GAGTGTTCC ATTC GGGGCACTC            TTTTTTACATTCCCT  54 243
SH07_RS13920 2787750 .. 2787762 -  -7.7  -3.07307   TAAATGTTTACGCAA                GTGCA CAA TGCAC                CCTTTCCACTATCAA  59 520
SH07_RS13885 NONE
SH07_RS13880 2781114 .. 2781126 -  -4.8  -3.59979   TTGGTTTACCTGAAA                GCCA GGACG TGGC                TGCCGCTTTACAGTG  55 482
SH07_RS13870 2779917 .. 2779955 -  -6.9  -4.16909   ACTTCAACAAAAACA  TGTCCACCTATGTTGATT ACAA AATCAACCT-GCTGGACA   ACGACGATGACTTCT  72 103
SH07_RS13855 NONE
SH07_RS13850 NONE
SH07_RS13845 NONE
SH07_RS13840 NONE
SH07_RS13830 NONE
SH07_RS13825 2772936 .. 2772960 - -16.5  -2.83164   GCAGGCATTAGCACA          CCAGGCCGGAT GTG ATCCGGCCTGA          TGTTAATGATACCCT 100 42
SH07_RS13820 2770915 .. 2770939 -  -8.6  -3.65827   CAATTGTCAGGCAAA         CGCCCA-ACCA CACT TGGCCTGGGCG          ATGGGCCAAACGATG  69 198
SH07_RS13805 2769383 .. 2769416 - -13.9  -3.04248   CAACATGCGCTAACA     CATTCTGACTGGTGG TTTC CCACCAGTCAGGCTG      AATAAGATTACTCTG 100 33
        fliE 2757477 .. 2757492 -    -4  -3.82604   GGATGTAATTAACAA              CAGGTT ACAA AACCTA               CACCTGCATGCTCAT  57 23
SH07_RS13720 NONE
SH07_RS13715 2756027 .. 2756037 -  -5.4   -2.7898   TTTAATATTTAATTA                 TGAG TTC CTCA                 CCATCTATTACATAC  50 1
SH07_RS13690 2752439 .. 2752459 -   -14  -2.66272   GGTGATTTAAATTCA            TCCCCGGC GGCAA GCCGGGGA            GATTTCATTACGGCA  95 33
SH07_RS13665 2746709 .. 2746725 - -15.1  -5.64274   CCAGGCAGAAAAAAA              CCCCGCC GGT GGCGGGG              AAGCACGTTGCTGAC 100 200
        fliA NONE
SH07_RS13655 NONE
SH07_RS13650 2744337 .. 2744354 -  -8.4  -5.63517   CGCGTAAATAAAAAA             GGCGCT AGTGAA AGCGCC              CTTTTTTGTCATTAT 100 46
SH07_RS13645 NONE
SH07_RS13640 NONE
SH07_RS13635 2741663 .. 2741680 -  -3.5  -3.38272   GAGTATCATTTATAA             TGATAAT TCAA ACTATCA              CATAAATAAGATTTA  49 197
SH07_RS13630 2740840 .. 2740866 - -12.3  -4.70583   GTCAGTAATATAAAA         CCGGCTGATAG CGTGC CTTTCAGCCGG         TTTTTGCATCTGGCA 100 59
        sirA NONE
        uvrC NONE
SH07_RS13605 2737056 .. 2737068 -  -4.1  -3.60431   AAAATTACGCCGAAA                CGATC ACT GATCA                AGCAAATCTGCACGC  54 16
SH07_RS13600 NONE
SH07_RS13595 NONE
SH07_RS13590 2736545 .. 2736558 -  -8.1  -5.64274   GCAGGCACAAAAAAA               CCACC CGAA GGTGG                TTTCACGACACTGCT 100 72
SH07_RS13585 2735699 .. 2735740 -  -5.1  -2.75819   CAGATAGCCTCAAAT TCCTTATTGGGTGCCAG AATTAACG CTGACACCCAATTTGGC  CTCTTAATGCAGGCA  50 29
SH07_RS13575 2733930 .. 2733940 -  -6.8  -3.61988   TTATTGATAAATTAA                 GCCT GGC AGGC                 AAAAGCGGCGAAGGT  63 126
SH07_RS13555 2732264 .. 2732291 - -13.5  -3.86822   GAAGGTTTTGAGAAA        CCGCTGCCTCA TCTGTT TGAAGCAGCGG         TTTTTTTAATGGGAT 100 31
SH07_RS13545 NONE
        araG 2728353 .. 2728363 -  -6.8  -3.07816   TCCTTACTCAGGCAA                 CAGC CTG GCTG                 ACTTTAGGCATCGCA  59 7
        araH 2727282 .. 2727303 - -11.6  -3.49048   TTGCAACGAAGAACA           GCCAACCG TTATGG CGGTTGGC            TATGGTGGGAAAAAA  89 66
SH07_RS13530 NONE
SH07_RS13525 2724609 .. 2724622 -  -2.3  -4.08692   CAACTGCTGGCAAAA               GCGGT ATCT ATCGC                CAGGCCAGTAAAGGG  56 381
SH07_RS13515 NONE
SH07_RS13510 2722782 .. 2722805 - -12.5  -5.75342   TTGGGGCAAAAAAAA          GCAGCGGTA CGTCGT TACCGCTGC           TGGAATGTTGCGCCT 100 52
SH07_RS13505 NONE
        motB NONE
SH07_RS13495 NONE
SH07_RS13490 2718353 .. 2718373 -  -8.3  -5.67283   AATTGAAATAAAAAA            CCCGATG CGCAGAT CATCGGG            TTCATTTCAATTGAG 100 54
SH07_RS13485 NONE
SH07_RS13480 2714922 .. 2714951 -  -2.1  -2.90763   CCCACAGGGCAGAGA       TGAAGTCATAGCG CCTT CTCAATCACTTCA        GGATACCACTGGCGC  42 23
SH07_RS13475 NONE
SH07_RS13470 NONE
SH07_RS13465 NONE
SH07_RS13460 2711917 .. 2711952 - -13.4  -2.78596   CATCGCCTTATCAGA    CCGCCTGATATGACGT GGTC ACGCCACATCAGGCAA     TACAAATCAAAATCC  93 32
        flhB NONE
SH07_RS13450 NONE
SH07_RS13445 2707769 .. 2707779 -  -6.8  -3.92996   CGTTATATAGAACAA                 GTGC CAC GCAC                 AGGTGTAAAAAAACC  68 392
SH07_RS13430 NONE
SH07_RS13425 2704014 .. 2704038 -   -10  -5.64274   TCAGGGATAAAAAAA          GGCCCCTG TTGAAATTG CAGGGGCC          TGGTACGAGCAAGCA 100 73
SH07_RS13420 2702592 .. 2702610 -    -3  -3.14132   TTCCTCCCTGATCAA             CGAGGATC ACT GTTTCTCG             GTAATATCTTTGGCG  46 13
SH07_RS13415 2699816 .. 2699828 -  -9.1  -2.87132   GTGGTTTTGTAGATA                TCCGC ATT GCGGA                TGTGAGCGTTACCAC  65 341
SH07_RS13385 2694287 .. 2694302 -  -3.2  -3.05384   GCCGCCTCGATGCAA              CGCGAA TGAT TTCGTG               TATTTGAGTCATATC  44 39
        nudB 2693723 .. 2693734 -    -3  -4.83615   GACCTGCCATAAAAA                TATC TCCA GATA                 GCCCTGCCTGTTCAG  68 37
SH07_RS13375 2692984 .. 2692994 -  -6.8  -2.94218   AGGCCTCATCAGAGA                 GTCG CTG CGAC                 CTCATCAGAGATTTC  58 8
        ruvC 2692388 .. 2692413 - -10.4  -3.61178   CGGAGGGAGTGGAAA         CGCCTCAGCC GGAACT GACCGAGGCG          GTATAACTTAACGCA  82 33
        ruvA NONE
SH07_RS13355 2689857 .. 2689895 - -11.7   -3.0976   GGTAAGACGCGAACA   GCGTCGCATCAGGCA TATTGCCAG TGCCGGATGCGGCGC   GAGCGACCAATCCGA  84 42
        znuA NONE
SH07_RS13335 2685840 .. 2685862 - -10.6  -5.99154   CACCAAATAAAAAAA           GCCGGTAC TGACTGC GTACCGGC           TGCGAATGGATGTTA 100 42
SH07_RS13330 2684661 .. 2684699 - -13.9  -2.81725   ACGGTAGAGTAAGTA  CGTTG-CCGGATGCGGCG AAAA CGCCACATCCGGCCTACA   GTTCAATGATAGTTC  95 114
SH07_RS13315 2682014 .. 2682029 -  -5.4  -4.15565   GCGATTACGGGAAAA              GCGCGCA AAG TGCG-GC              AAAACTGATAAAAAA  65 42
SH07_RS13310 2680300 .. 2680325 - -11.2  -5.80364   AGTGTAATAAAAAAA         GCCTCGTG-GG TGAAT CCGCACGAGGC         CTGAAAGTGTAAAAA 100 105
SH07_RS13305 NONE
SH07_RS13300 2677651 .. 2677671 - -15.5  -4.90296   AAAACGCTACAAAAA            TGCCCGATC CTC GATCGGGCA            TTTTGACTTTTACAG 100 35
SH07_RS13290 NONE
SH07_RS13285 2675552 .. 2675563 -  -3.6  -3.28712   TTCTGGGGCGGACAA                GGCA CTCG CGCC                 GCATCCGCCAACAGT  49 62
SH07_RS13275 2674608 .. 2674622 -   -10  -2.91582   CAGGCTATCCAGAGA               GCGGAA TTA TTCCGC               CAAAGTGCGTTTTTG  73 17
SH07_RS13270 2672163 .. 2672189 -    -5  -3.32844   GGCTGGACGGCAGAA         CAGATGGCCGAT ATC ACCGGACGTCCG         TCGTTGATGACGACC  51 181
SH07_RS13250 NONE
SH07_RS13245 NONE
SH07_RS13240 2668865 .. 2668894 -  -5.1  -4.70879   CTGAAATGTTAAAAA      CCGCC-C-GTTCT GGTGAA AGAACTGAGGCGG       TTTTTTTATTGGAAA  73 62
SH07_RS13235 2668677 .. 2668703 -  -8.8  -4.16832   TAACAGATAAAAAGA         GACCGAACAC GATTCCT GTATTCGGTC         CAGGGAAATGGCTCT  83 82
SH07_RS13230 2667594 .. 2667610 -    -5  -4.44608   CTGATCCAAAAAGAA              CCCGTC GGCAT GGCGGG              TTATTTGTCCTGGTT  68 294
SH07_RS13200 2661150 .. 2661169 -  -6.4   -3.1552   GCGCAGGCATGAACA            GGCGTCAT TATA ATGACGCT             ATCAGTAAATGCTAC  57 53
SH07_RS13195 NONE
SH07_RS13190 2658304 .. 2658327 -   -14  -5.00616   GTCGCTGTTAAAAAA          TCAGGCACAA TTTC TTGTGCCTGA           TTGATATTACTTGAC 100 32
SH07_RS13185 2657221 .. 2657240 - -10.7    -5.626   CAGGGCATAAAAAAA            GCGCGTC GATCAG GACGCGC             TTTTTAGTATTTACT 100 46
SH07_RS13175 2654834 .. 2654864 -  -6.9  -4.44046   CTCATGCTAAATAAA       GAACCTGTCTG TTTGATATT CCGACAGGTTC       TTACTCTCATCAGAA  76 35
SH07_RS13165 2654187 .. 2654201 -  -2.8  -3.37655   GTGCTGAAAAAATGA               TATCAC CAC GGGATA               AACTGGTTAATGGCA  46 13
SH07_RS13160 2653782 .. 2653813 -  -9.6  -3.25729   TATAATCAGGATGAA      TTGAGTAAC-CCTTC AAC GACGGGGTTACTCAA      GATTGAGGAAGGATT  74 39
SH07_RS13150 NONE
SH07_RS13145 2652725 .. 2652743 -  -8.1  -4.85177   AAAGCATAGTAAAAA             GCCTCGC ATTCG ACGAGGC             TTTATAGCGAGATTG  91 74
        rrmA 2651548 .. 2651564 -  -7.9  -2.55437   GATGAAGATGAAGAG              CCGCGCC GTC GACACGG              TTTCTGGCTACTGGT  56 278
SH07_RS13105 NONE
SH07_RS13100 2645520 .. 2645554 - -14.9  -3.54424   CGTGATTTTCCCAAA     TGGCTGGCGGGCAGC CAACC GCCGCCCGCCCGGCA     TAATGGACATATCAC 100 66
SH07_RS13075 2639796 .. 2639814 -  -3.2  -3.17723   GCACGGCGAAGGGAA             TCTTTAAA TAT TTAAAAGA             ACTGGGAGTACCCGC  45 329
SH07_RS13060 NONE
SH07_RS13055 NONE
SH07_RS13050 2635471 .. 2635495 - -14.4  -2.66106   TACCGTAAGAATGCA          GAAACAGCGG ACCAG CCGCTGTTTC          TTTTTCTTTAAAAAC 100 47
SH07_RS13045 2633590 .. 2633606 - -10.8  -5.75342   GGGCGTCAAAAAAAA              CGCCGG ATTAA CCGGCG              TCTGACGACTGACTT 100 46
SH07_RS13040 2632249 .. 2632259 -  -3.2  -3.57561   GCGGAACCTGCGAAA                 CAGC AAT ACTG                 GAAGGTGAAGCTGAC  51 196
SH07_RS13015 2626410 .. 2626425 -  -7.6  -4.64846   TTAGAAAGGAGAAAA              TCAGGT TTTA ACCTGA               TATCAACCCGATAAT  86 52
SH07_RS13010 2625655 .. 2625665 -  -2.4  -2.96395   AGGGAGGATTATAGA                 TGGG AAG CCCG                 CGACAACGCGGGCTG  42 47
SH07_RS13005 NONE
SH07_RS13000 2624979 .. 2624993 -    -5  -2.82529   GATAATTACCAACCA               CAAACA TCA TGTTCG               TTTTCCGTGTCATAA  49 1
SH07_RS12995 2624534 .. 2624559 - -13.4  -3.08056   ACCTCTAAAAAATAG         CAAAGGCTGC CTGTGT GCAGCCTTTG          TGCAATTTAAGCGTT 100 39
SH07_RS12980 2622771 .. 2622795 -  -6.5   -5.1675   CTACTCAGCAAAAAA         CACCA-CGCA GAACCA TGCGCTGGTG          CTGGCCGACTGGCTA  86 74
SH07_RS12965 2619882 .. 2619893 -    -3  -2.80464   GCAGCAAGCGTAAAG                TAAG CAGG CTTA                 TTATTTTTTGGCAAG  43 453
SH07_RS12955 2619158 .. 2619174 -  -2.1  -3.64236   ACTGAAATGGCTAAA              GGAAGCG TGA CGCATCA              GCGGTTAATCGCTTT  49 495
SH07_RS12925 2611240 .. 2611256 - -13.7   -4.2803   CACCGTAATGCAAAA              CAGGGCG TGA CGCCCTG              TTTTTATGCACAAAA 100 61
SH07_RS12920 2610305 .. 2610352 - -19.4  -2.56046   CGAAACGTTAATTTA CGTTAATGTTGTGTGCCGGGTGC AAT GCATCCGGCACACAACATCA-CA CCATATCCAGCGCAG 100 21
SH07_RS12905 NONE
SH07_RS12900 2606976 .. 2607009 - -12.7  -2.95341   AGGTCAACATTAAAT     CTGTAAAACACAGAT AATG ATCTGCGTTTTACAA      CTCAGATCACAATTA  93 284
SH07_RS12895 NONE
SH07_RS12890 NONE
SH07_RS12885 NONE
SH07_RS12880 NONE
SH07_RS12875 NONE
SH07_RS12870 2600451 .. 2600470 -  -2.2  -2.85351   TCTTTTTACATCACA            TTAGCGCGA TTA TCGCA-TAA            CCGATGTTTACTTTC  41 112
SH07_RS12865 2599579 .. 2599600 - -10.9  -2.57261   TAAAAAGGTAGCAAT           TGCGGCAAA TTCA CTTGCCGCA            TCTTTATCATCATTT  76 87
SH07_RS12860 2597830 .. 2597842 -  -4.7  -3.28712   TGCCTTTTTTGATAA                CGGCC GTC GGCAG                AAAACCTCTCTCGAT  51 370
SH07_RS12835 NONE
SH07_RS12830 NONE
SH07_RS12825 NONE
SH07_RS12820 2590494 .. 2590524 -    -7  -5.81412   TCCATGCAAAAAAAA       TATCCAACGAAT TTTCTTG ATCCGCTGGATA       TTTCAGAATATGACT 100 66
SH07_RS12815 2589290 .. 2589315 -  -8.3   -2.7644   ATTTAAGTTGTAAAT         GCCTGAT-GGCG CTA CGCTTATCAGGC         CTACAAATGGGCACA  64 107
SH07_RS12805 2587187 .. 2587203 -  -3.6  -2.84051   CGAGCCGGATGAAAG              TCAGCG GCAGG CGCTGG              TGCGTGAGTTACGCG  45 251
SH07_RS12795 2586298 .. 2586313 -  -4.6  -5.09895   CAGCGATCCAAAAAA              TCCGGT AGCA ACCGGT               GAACGCGGCCCGGAC  81 61
SH07_RS12745 NONE
SH07_RS12740 NONE
        astD NONE
SH07_RS12730 NONE
SH07_RS12725 2571491 .. 2571516 - -16.3   -3.2827   AAGAAAGCAACTTAA         TACCCGCAGAA TGAT TTCTGCGGGTA          AGTATTAGCTTATTT 100 30
SH07_RS12720 2570632 .. 2570682 - -19.8  -5.26907   GAAGAGAAAAGAAAA CCGCCGATCCTGTCCACCGCATTA CTG CAAGGTAGTGGACAAGACCGGCGG TCTTAAGTTTTTTGG 100 49
SH07_RS12715 2569684 .. 2569698 -  -5.6  -3.22774   GAGAGCCATGAGGAA               CATGCG CTA CGCTTG               CGCCAGTCTCTGGAG  52 255
SH07_RS12705 2568749 .. 2568765 -    -3  -4.74103   TCTGGAAGGGAAAAA             CGTACCT CAAC AGGT-CG              CCAGAACAATAGAGA  71 80
SH07_RS12695 2567434 .. 2567449 -  -7.5  -5.78622   TCAGGCCAAAAAAAA              CCGGC GCAATG GCCGG               TTTCCGTTGTTACTC 100 60
SH07_RS12690 2566800 .. 2566819 -  -7.9  -4.62904   AAATACCCTTAAAAA            CCGCAAT TTAAAT ATTGCGG             TATTGATTTATGAAA  86 71
SH07_RS12685 NONE
SH07_RS12680 NONE
SH07_RS12675 2564129 .. 2564141 -  -3.3  -4.14627   CCCGGACATAAATAA                TCCAG CAA CAGGA                CAGATATGTGAATTG  58 55
SH07_RS12670 NONE
SH07_RS12665 2561908 .. 2561941 -  -5.9  -3.39895   CTTTGTAGGAATTAA     TCGCCGGATGCAAGG TTCA CGCCGCATCTGGCAA      ACATCCTCACTTACA  57 36
SH07_RS12655 2558957 .. 2558975 - -12.4  -3.06796   TTTCAGGTCATGTAA             CTCCCGGC AAA ACCGGGAG             GTATGTAATCCTTAC  93 37
SH07_RS12650 2557531 .. 2557541 -  -8.2  -3.30619   AACCATTGGTCAGAA                 CGGC TGC GCCG                 GTTTGTATCCGGCAA  65 379
SH07_RS12630 2554240 .. 2554256 - -10.8  -2.64099   TGGGTTGAGGATAAT              GGCCGC TCCGT GCGGCC              TTTTGATTAAATAAA  76 32
SH07_RS12610 2550858 .. 2550882 - -12.1  -3.25317   TGACAAACGAAGACA          GCCAGACCGCA TAA CACGGTCCGGC          AGATAATTTTACATG  89 34
        thrS NONE
SH07_RS12590 2545617 .. 2545644 - -14.2  -4.23707   ACAAAGGCGAACAAA        GCCTGTGAAGCC CGAA GGCTCCACAGAC         AGTGCTACTTGAAGG 100 43
SH07_RS12585 2545350 .. 2545364 -  -2.9  -4.87291   TATTCTAATTAAAAA               GTTAA AAACG TTAAC               GGCTTATGCGTACGG  67 29
        rplT 2544929 .. 2544947 - -10.3  -4.54727   GCGTTGAAACGAAAA             GAGGGAG ACTAG CTCCCTC             TTTCAACTGGCTTAT 100 37
SH07_RS12575 NONE
SH07_RS12570 NONE
        pheT NONE
        ihfA 2540787 .. 2540801 - -12.8  -5.80951   AGTGAAAAGAAAAAA               GGCCGC AGA GCGGCC               TTTTTAGTTAGATCA 100 43
SH07_RS12555 NONE
        btuE NONE
SH07_RS12545 2538367 .. 2538379 -  -2.7  -3.07895   CCGATTTTCAAGATA                CTAAT GAA ATCAG                ATGGTCGAAATCAGC  44 22
SH07_RS12540 2537795 .. 2537821 -   -21  -3.79747   GTATTCAGGAGTAAA         TGGACGGCGATG TAT CATCGCCGTCCA         TTTTTCGACATACTA 100 38
SH07_RS12535 2536805 .. 2536817 -  -3.3  -3.55261   GGGTAACAAAAGACA                GGGTC ATA GATCC                TCCTGTTTGATAGTG  49 82
SH07_RS12530 2534864 .. 2534892 -  -3.9  -3.73402   ATATTTGTCAGCAAA       TCC-GCAATGGC TCTACG GCGATTGCTGGA        ATTATGGCGGAAAGT  56 508
SH07_RS12510 2532718 .. 2532729 -  -2.2  -3.86822   GAACGGTTTGAGAAA                CACA TTTC TGCG                 CATTTATCTTTGCAT  51 29
SH07_RS12505 2530269 .. 2530293 - -16.4  -3.54475   TCGGGGATCACATAA          CCCCGGCGAC TAAAC GCCGCCGGGG          ATTTATTTTATTTCT 100 33
SH07_RS12475 2524901 .. 2524933 -  -6.3  -4.90869   ATGAGCAAGCAAAAA      CAATATATGCCGGAT AAA ATACGGCGTGTATTG      CGGTTATACAACCGC  80 63
SH07_RS12470 2523916 .. 2523956 -  -8.3  -3.16387   ATCAGAACAAATAAT CTGCAGGCGGCGCAGCTT CTTAAC AAACTGCGCCGCCAG-AT  TTATCCAACAAGACT  67 26
SH07_RS12425 NONE
SH07_RS12420 2510713 .. 2510744 - -12.4  -3.31726   CGCTTTTAGACAAGA      CCTGCACAGTATAC CACC GTTTACTGTGCAGA       TAATGACCAAAAGCA  95 70
SH07_RS12415 2510246 .. 2510276 -   -17  -5.05116   TCAGAAATAAGAAAA       CCCTTAAGTCTGTG CGA CACAGGCTTAAGGG       TTTCTACCCCATCCG 100 250
        sufA NONE
SH07_RS12405 NONE
        sufC NONE
SH07_RS12395 NONE
SH07_RS12390 NONE
SH07_RS12385 2504390 .. 2504408 -  -3.9  -3.60627   GCAGGTCAGTGTAAA            CATTGACC ATCC GG-CAATG             TGAGCCAACCGGATG  53 58
SH07_RS12380 2503246 .. 2503264 - -14.6  -4.74103   CTGTGAAGTGAAAAA             TGGCGCAC ATT GTGCGCCA             TTTTTTTTGTCTGCC 100 49
SH07_RS12365 2500466 .. 2500494 -   -14   -3.4945   ACTGAAGCAAGAATA        TCAGGATGAAGC TTACC GCCTCATCCTGA        ATGGTCATTTTACCA 100 30
SH07_RS12360 NONE
SH07_RS12355 NONE
SH07_RS12350 2496642 .. 2496658 -  -5.2  -3.54129   GACATCTCCCTGAAA              TTTCAG GGGTT CTGAAA              CTGCTCTACCTCGAA  57 11
SH07_RS12345 NONE
SH07_RS12340 NONE
SH07_RS12335 2494091 .. 2494108 -  -4.9  -4.62002   AGCAATTACAGAAAA             CAGGGGAT GAA ATCCC-TG             ATGTTGGCGAAGATT  72 231
SH07_RS12310 2490407 .. 2490430 - -13.9  -3.96841   CGCTAATAAAGACAA          GGCGCAACC TTCACG GGTTGCGCC           TGTATTTTTACGCAG 100 33
SH07_RS12300 2488130 .. 2488144 -  -4.2  -3.53224   GAGTGGCTCGCTAAA               GGCTAT TCT ATCGCC               CCCTCTCCGGGGGCG  52 49
SH07_RS12285 2483936 .. 2483948 - -10.5  -3.06796   CGTTATCTGATTGAA                CGCGG TCA CCGCG                AAATCGGCGTCATCC  72 510
SH07_RS12275 2482940 .. 2482974 -    -3  -4.96276   ACAAAAAAATGAAAA     TAACAAAAAGAGAAAA CAC TTTTGCCATTTTGCTA     ACAAACAGGAAGGAG  71 74
SH07_RS12270 2481609 .. 2481626 -  -9.1   -2.5955   AGGTCGGATAAGGCA             CTCGCCG CATC CGGCAAG              ATAAATCGCACGTTG  66 87
SH07_RS12255 2479279 .. 2479306 - -15.7  -3.09116   GGGATAGAGAAAGGA        CTGACGGATGC CCGTTC GCATCCGTCAG         TATTGCAGGACGGAT 100 40
SH07_RS12225 NONE
SH07_RS12220 NONE
SH07_RS12215 2469606 .. 2469629 - -10.2  -2.52516   CCCGTCATCATCAAC          CTGCCGCCCG TGAG CTGGCGGCAA           TTGTCTGGCGGCTGT  65 97
SH07_RS12195 2465915 .. 2465950 - -11.8  -3.90744   CTCCGCGCTAAATAA    GTTTGCGTGTGGTCAG GTTA CTGACCACACGCCCCC     TTCATTTCACCCTTT 100 32
        anmK 2464044 .. 2464057 -  -2.4  -3.63367   CGCGGTAAGAAAAAT               TCAG TTAACT CTGA                TATCACGGGTTAGCG  49 28
SH07_RS12180 NONE
SH07_RS12175 2462899 .. 2462911 -  -3.4  -3.77196   GTACCAGCGATTAAA                GCAA GATTT TTGC                ATCTTTTCAGGGTGC  53 32
SH07_RS12170 2461473 .. 2461502 - -10.7  -4.82901   TTCCCTGTATAAAAA       CCAGGGGGAGTGA TTTC TCACTCCCCCTTT        CCACTTAATGCATTA 100 38
SH07_RS12165 2460224 .. 2460234 -  -5.4  -4.36914   TTTCCCGCTATAAAA                 CCAT CGA ATGG                 CTGAATTACATCGCC  70 384
SH07_RS12095 2448802 .. 2448835 - -15.5  -3.33696   GTCGCCGCGAAGTAA     CAAAATGGATGGTGC AAAT GCACCATCCATTTTT      CATGCAAGGCACAAA 100 25
SH07_RS12075 2443641 .. 2443657 -  -5.1   -5.3104   TCAGTAAAAATAAAA              GGCAC CGCCTGT GTGCC              ACATTTTTTATCATT  84 87
SH07_RS12070 2442693 .. 2442704 -  -5.8  -3.01924   CATTGCTGTTGAATA                GTGC GAAG GCAC                 ACTCTATTCGTATAC  54 161
SH07_RS12065 2441860 .. 2441875 -  -5.4  -3.72078   CCATAAAATAAGCAA              CCGAAC GTTC GTTCGA               GCGTATTGGGAACGA  59 179
SH07_RS12060 NONE
SH07_RS12055 NONE
SH07_RS12050 2437122 .. 2437145 - -13.9  -3.72051   GTCAACAATCTGAAA          CGCCGGAGA TTTTTC TCTCCGGCG           TTATTTTTTACTTCA 100 33
SH07_RS12035 2432276 .. 2432291 - -11.8  -5.47218   TGCCATGTAAAAAAA              CCGCCC CGAA GGGCGG               CTCTGTTTATTTCAC 100 32
        fumC 2430662 .. 2430691 -  -4.3  -3.55444   TGGTGAGTTGTTAAA       TTACGATGCCG-AC AAT GTGCAGCACCGTTA       TAAACCTCAGGCGCA  53 86
SH07_RS12010 2427179 .. 2427199 -  -8.3  -4.06419   CCTGGCGAGAAAGAA            GTGATCGAC CTG GTCGATTAC            TTACTTACCAGTTGC  77 88
        pntA NONE
        pntB 2420511 .. 2420536 - -13.3  -3.69068   CGATCTCAATAAAGA         GTGACGGCCTC AGCA GAGGCCGTCAG          GGTTACAGAGCTTTC 100 28
SH07_RS11975 NONE
SH07_RS11970 2418357 .. 2418380 - -15.3  -3.65722   AAAATAATGTTCAAA          CGCTGCCCG ACAGCG CGGGCAGCG           TCTTCATCAGGCAAG 100 32
SH07_RS11945 2414279 .. 2414291 -    -2  -2.63596   CCTCACCTGAGAGCA                TTCA GCAGA TGAA                TACGAAAGTTACGCG  40 0
SH07_RS11940 2412834 .. 2412854 -  -3.3  -3.16345   AACCAGGAAAATAAT            TAACCTTGA AAG TCTAAGTTA            TGCTTTCCTGGCCCA  46 82
SH07_RS11935 2412023 .. 2412047 - -15.8  -2.93585   TGATATGTGAAATGA          CCGGGGAGTA TCAGC TACTCCCCGG          TTTATTGATTGCCTG  95 69
SH07_RS11895 2402019 .. 2402041 -  -8.4  -2.89565   AATTTCAGATAATTA           TCTCCCCGGA GTA TCAGGGGAAA           GGTCTGGCAACCCGT  61 298
SH07_RS11880 2400814 .. 2400827 -  -2.3  -3.99153   TGATCACAAAAAAAG               GCGTA TATT TGCGC                TGTGAATGGTTGACA  53 112
SH07_RS11875 NONE
SH07_RS11870 2398033 .. 2398052 -  -4.2    -4.431   GACGCAGCGATAAAA            CG-TGCCGG ACT CCGCCATCG            AAAATCATATCAGTC  66 436
SH07_RS11855 2395703 .. 2395725 -  -9.9  -2.86049   CAACAAGGGAAGAAG          GCGCTGTGGC TGTA GCCACAGC-C           ATTGAAGCTGGCGAC  72 164
SH07_RS11840 2394258 .. 2394283 -  -7.5  -4.24963   CACAATCATGGAAAA         GGCTTACGAAG AATA CTTCGAAGGCC          TTGCCGAAGGCGAAG  75 354
SH07_RS11820 NONE
SH07_RS11815 2392532 .. 2392569 -  -4.2  -3.24447   GACAGTCCACAAAAC   TGCCAACTTCCGCT TCTTGCTCTT AGCGGACATTAGCA    TAGGCTATTTACCAT  51 362
SH07_RS11805 NONE
SH07_RS11800 2390870 .. 2390883 -  -2.4   -2.9732   TGTCAACGCAAAGCA               GAAG TGTCAC CTTC                GGTGCGAAACAGAGA  42 55
SH07_RS11795 2390602 .. 2390615 -  -9.5  -5.77734   AAATAAAAACAAAAA               CCCGC CGAA GCGGG                TTAAGTGCGGGTGCG 100 96
SH07_RS11790 NONE
SH07_RS11785 NONE
SH07_RS11780 NONE
SH07_RS11775 2387923 .. 2387954 - -12.4  -3.64822   ATTGCCCCATTTAAA      GCACAAAACCCGCT CATC AGCGGGTTTTCTAC       TTTTTCTTAACGTCG 100 127
SH07_RS11765 2386608 .. 2386621 -  -9.5  -5.60689   GCAGATAATAAAAAA               CCCGC CTGA GCGGG                TTTGAGATTGTGGTG 100 310
SH07_RS11760 NONE
SH07_RS11755 NONE
SH07_RS11750 NONE
SH07_RS11745 2384365 .. 2384375 -    -4  -4.03413   ACTGCTTCAGATAAA                 TTTG TAA CAAA                 CCAGAACACCATTAA  59 247
SH07_RS11740 2383801 .. 2383814 -  -8.1  -5.31059   ACACCAAGCAAAAAA               GCTCC CGAA GGAGC                CTTCATTTTCACTTT 100 233
SH07_RS11735 2383427 .. 2383437 -  -5.4  -3.95836   ACGTGTAAAAGATAA                 GATG AAA CATC                 GCAATAATCAACATA  63 109
SH07_RS11730 2383131 .. 2383146 -  -6.8  -4.95302   TCAAATATAACAAAA              CCCCGT AAAA ACGAGG               TTTATGGATAAATTT  86 55
SH07_RS11715 NONE
SH07_RS11710 NONE
SH07_RS11705 2379787 .. 2379799 -  -3.4  -4.78477   ACATATAAAAAATAA                TCTC GGTGT GAGA                TGCTTTACGTCTTCC  68 103
SH07_RS11690 2376537 .. 2376560 -  -9.6  -5.16841   TTATATGAATAAAAA          TCCCCTCTCC GGTA AGAGAAGGGA           TTAAGGGTTTACAGA 100 34
SH07_RS11685 2374903 .. 2374913 -  -6.8  -3.73224   TGACCGCTGAGCAAA                 TCCG CCG CGGA                 AAAACCGTAGTTGTT  66 132
SH07_RS11665 2370862 .. 2370890 - -13.2  -2.83271   TTACTGCTATAACCA        GGCTGGCCTG GCGATATCT CAGGCCAGCC        ATTGGTGGTGTTTAT  91 37
SH07_RS11655 2369631 .. 2369660 -  -8.6  -2.50779   AGCATAACCCAATAC       CCTAATGGCCCA GTAGTT CAGGCCATCAGG        CTAATTTATTTTTAT  63 37
SH07_RS11650 2368392 .. 2368409 - -10.5  -5.76949   GACGGCGAAAAAAAA             CCGCCAG TAAA CCGGCGG              TGAATGCTTGCATGG 100 143
SH07_RS11635 2365533 .. 2365545 -  -7.7  -3.08522   CAGCTAGTTGAAAAC                GTGAC AAC GTCAC                TGAGGCAATCATGAA  63 285
SH07_RS11615 2363792 .. 2363805 -  -9.5   -3.6707   ACGCAATAGTTGAAA               GGCCC ATTC GGGCC                TTTTTTAATGGTACG  78 30
SH07_RS11595 NONE
SH07_RS11590 NONE
SH07_RS11585 NONE
SH07_RS11580 2356400 .. 2356416 -  -5.9  -2.52896   TCATGGTTTAATCGA              GGAAAAA CGC CTTTTCC              TGGATCATAAAGTGG  52 83
SH07_RS11575 2354761 .. 2354776 - -10.4  -4.56978   TGGTGAAATAAGAAA              CCCGGT CGAA ACCGGG               TTCAGAAGTAACGGT 100 45
SH07_RS11565 2353593 .. 2353606 -  -6.7  -3.03771   TCAGATGCTGGAAGA               GCAGT ATCC ACTGC                AAGAGAACGGACAGA  56 94
SH07_RS11525 NONE
SH07_RS11520 2344145 .. 2344178 -  -6.1  -4.72333   AACTATACTCAAAAA     CTAACAGCCACGGTCA TCA TGAT-GTGGCTGTCAA     TGAAACTATAACCCA  77 31
SH07_RS11515 NONE
SH07_RS11510 2338198 .. 2338222 - -14.3  -3.36452   AGTCGGCAATATTAA          GCCGCATGCCA TCT CGACATGCGGC          TTATACGGTTTACCA 100 35
SH07_RS11505 NONE
SH07_RS11500 2336136 .. 2336147 -  -5.8  -2.62158   TTAAATAAGTAACAG                CACC CTCT GGTG                 TTTTCGTATGCAGTG  52 299
SH07_RS11495 2335564 .. 2335593 -  -5.7  -2.71731   TTGACGGTGTAACCA       CTCATTCGACTGT AGGC ACTGTCGGATAAG        TTATAAAAACCTTGC  52 356
SH07_RS11490 NONE
SH07_RS11485 NONE
SH07_RS11480 NONE
SH07_RS11475 2332147 .. 2332162 -  -7.6   -3.6164   AACATGGATATATAA              GAGTAG GGGA CTACTC               TCTTTCTATTTTTAA  70 250
SH07_RS11470 2329730 .. 2329760 - -12.8  -3.28537   ATAGTCAATGAGGAA       TTCTTCTGCTGT GCGGATG ACAGCAGAAGAA       ATGAGAAGAGGCATT 100 39
SH07_RS11465 2329270 .. 2329286 -  -4.5  -4.08767   TTTATCTCCTTAAAA              CAATAAA GTT TTTATCG              ATACTTTTTTAACAT  63 68
SH07_RS11460 2328423 .. 2328445 -  -8.4  -2.53831   CGCCTAAAAACAACG           CGGGGCAG GGAATGG CTGCCCCA           TTTAATTCTTACGCA  63 73
SH07_RS11455 2326377 .. 2326396 -   -15  -2.76815   ATCTCGCTCAATAAG            GCGGCGGA AAAA TCCGCCGC             ATGAAGGTTTAGTTA 100 38
SH07_RS11450 2325121 .. 2325146 - -10.5  -3.80841   ATGATGATGACGAAA         CACCCGACA GGAATTTA TGTCGGGTG          CCTTGTTAAGGTCAT  86 79
SH07_RS11445 NONE
SH07_RS11440 2320777 .. 2320794 -  -6.2  -4.13945   ATCTCCATGCGAAAA             CCGGGC GAATTT ACCCGG              TTAAGTAAAATCCGA  69 45
SH07_RS11435 2317943 .. 2317967 - -13.6  -3.08201   GAATATTGCTAAAAT          CCCCGCCAAC GATGT GTTGACGGGG          CTGTTATTATTTTGG 100 32
SH07_RS11430 NONE
SH07_RS11425 2316164 .. 2316193 - -15.1  -3.57387   AACAGACTTTGGAAA       TTGTCCCGAAACG GGTT CGTTTCGGGACAC        CGTTACCGTTAAACG 100 44
SH07_RS11420 2314473 .. 2314495 - -13.5  -4.81685   AGCAAGCACGAAAAA           GGGAGCGAT GAATT ATCGCTCCC           TTGTCTTATAACCAT 100 51
SH07_RS11415 2313017 .. 2313055 - -11.8  -3.07962   TGGGATAGTTTAAGA   GGGTAACAAGCCGGTG GGTAAAG CACCGGCTTGTTACAA   AGTAAGAATGGGAGT  86 41
SH07_RS11410 2311332 .. 2311343 -  -5.8  -3.40597   TGGCGCATCTAAAGA                CTGG CTTT CCAG                 AGTTCAACACGGTTT  59 7
SH07_RS11405 2308874 .. 2308887 -  -9.5  -4.55798   CACGTTAAATGAAAA               CCCGC GAGT GCGGG                CGAGAGGAATTTGTC  95 39
SH07_RS11400 NONE
SH07_RS11395 NONE
SH07_RS11390 NONE
SH07_RS11385 NONE
SH07_RS11380 NONE
SH07_RS11375 2302588 .. 2302600 -  -3.3   -3.6682   TCTCAGGTACTGAAA                GCGGA AAT TACGC                TGGATTACCAGTTGA  51 104
SH07_RS11365 2301570 .. 2301581 -  -5.8  -3.32946   GTTTTAAGGACAACA                TCGC CGTA GCGA                 AGAAACACGTGCTAA  57 76
        rpsV 2301339 .. 2301360 - -13.1  -5.71295   AGATAAAAACAAAAA           CACCATTGC GCAG GCAATGGTG            TTTAATCGTCATTGA 100 58
SH07_RS11355 2299509 .. 2299532 - -14.6   -3.4404   AGGGAGAGGGAAATA          GCCCGGTAGC CTTC ACTACCGGGC           GCAGGCTTAGATGGA 100 32
        adhP NONE
SH07_RS11345 2297804 .. 2297855 - -10.3  -2.63257   ATTGTAGACAACGTA GGCTTTGTTCATGCCGGATGCGGCG TGAA CGCCTTATCCGGCATGA--AAACCC TTCAAATCCAATAGA  74 135
SH07_RS11320 2291827 .. 2291849 - -13.4   -3.1706   AATTTATCTGATTAA           CTACCGGGCC GTA GACCCGGCAG           TTATTTTAACCACGA 100 31
SH07_RS11315 NONE
SH07_RS11310 2289933 .. 2289954 -  -3.1  -3.54436   CAGACACTTATAGAA           TTAGTGA TGATTTAT TCACTAA            AAAGGCCATGAACTG  49 22
SH07_RS11305 2288165 .. 2288179 -  -6.4  -2.66964   TTACTCATGACATGA               CTCCTG CTC CAGGAA               TGAATTGGGATCTGA  54 85
        narZ NONE
        narH NONE
SH07_RS11290 NONE
        narI 2281429 .. 2281451 -  -6.2  -3.14132   CTGCGGTTTCATTAA           CGTTCTCCTG TGA CTGGAGAACT           ATCATAGCCTGCAAG  57 78
SH07_RS11280 2280488 .. 2280506 -  -2.3   -2.6927   ATCCGGCATACATTA             GCCCGGT TGTAG ACCTGAC             AGGCGAAGCGCATCA  40 51
SH07_RS11270 2278673 .. 2278686 -  -8.1  -5.31855   GACGAACAACAAAAA               GCAGC ACTT GCTGC                AGATATTACCGACGT 100 188
SH07_RS11230 2269824 .. 2269836 -  -4.8   -3.6682   GCCGACTCATCCAAA                CAGC CTGGC GCTG                TCTGCCGATGGCAAA  55 237
SH07_RS11220 2266501 .. 2266520 - -11.4  -4.06903   AATCGTTAAAGTAAA            TGCCCGGC AAAT ACCGGGCA             TCAAGGTAATTACTC 100 35
SH07_RS11205 NONE
SH07_RS11200 2263042 .. 2263057 -  -7.6  -3.40403   TCTTTCTCACGATAA              GAAACG CATC CGTTTC               TTAAGCGCCTTTCTG  62 417
SH07_RS11140 2254356 .. 2254395 -  -7.8  -2.79831   TGAATCTGCATGATA  TTGCCTGCCGGGTAAGGCG TTA CGCCGCATCCGGCAT-CAA  ATGACTCAACGTTGT  61 31
SH07_RS11125 2250416 .. 2250433 -  -9.9  -2.94888   AACCCACCGAAATGA             TTCAGGC GACA GCCTGAA              CGTAGCAGGGATCCA  73 64
SH07_RS11115 2248744 .. 2248763 -    -7  -4.07568   CGGTGCGCCGTAAAA            CCCCATCC TTCA GGGCGGGG             ATATAAGGCGCGGTT  70 191
SH07_RS11090 2244918 .. 2244946 - -12.5  -3.28791   ATGTCGGGTGGACAA        TCCGCAAAGCAAC CAG GTCGCTTTGCGCA        ATGGTTTTATCCTTG  83 115
SH07_RS11075 2243497 .. 2243514 -  -2.6  -4.30719   GGCTGGTATAACAAA             CGCCCA AGTCTG TGGGTG              GAACCGCGTAACAAG  60 510
SH07_RS11060 2239691 .. 2239706 -    -9  -2.75229   GAAAATGTTCAAGGA              GGGATC GACA GATCCC               TTCACCTTTCAGAAC  67 34
SH07_RS11050 2237461 .. 2237483 - -14.8  -3.65199   AATCTGCTAGTCAAA           TGCGCGGGGA AAA TCCCCGCGCT           TGCCCTTACCTGGAC 100 31
SH07_RS11035 NONE
SH07_RS11030 NONE
SH07_RS11025 2235250 .. 2235271 -   -13  -3.43853   TTAATGAGTGAAAGA           GGCGGAGG TTTTTT CCTCCGCC            TGTGCGCGTCAGAGT 100 34
SH07_RS11005 2227810 .. 2227823 -  -2.3  -3.27498   TACAGTCCACATCAA               GACCG TGTC CGGTT                ATGCAGAAACAATGC  45 24
SH07_RS10960 NONE
SH07_RS10955 2213000 .. 2213014 -  -7.1  -4.58466   TTGATAAGGATAAAA               CCGCA GACAA TGCGG               CGGAATATTTCTTCG  77 499
SH07_RS10880 2197130 .. 2197151 -  -7.3  -4.90778   CTTAGTGAAATAAAA           GGGCAAC TATTCGCC GTTGCCC            TTCATTCACCGATTA  85 38
        tynA 2194610 .. 2194624 - -11.4  -5.32944   CTCATAAGTAAAAAA               CGGCAC CTG GTGCCG               TTTTTTTGTCTGAAA 100 44
SH07_RS10865 2191914 .. 2191940 - -15.3  -3.33815   ATCTGTTTTAACTAA         TTGGCGTTGCA GTACA TGCAACGCCAA         TTAGTTAGCGGAATT 100 30
SH07_RS10845 2187391 .. 2187413 - -14.9  -2.74012   GGATTATCTGAATCA           GCTCCCCTG GAATG CAGGGGAGC           GGCAAGATTAAACCA 100 33
SH07_RS10840 2186529 .. 2186544 -  -4.6  -5.27769   ATAAAAAAGTAAAAA              TGCGGG GCAA CGCGCA               GGACAGCTCTCGACG  82 369
SH07_RS10830 2182770 .. 2182789 - -11.4  -4.16226   CATATAAAAAGACAA            GCCCGAAC AGTC GTCCGGGC             TTTTTTTTTAGAATT 100 63
SH07_RS10825 2181300 .. 2181318 - -10.2  -5.03945   GAATAAGCAGAAAAA             GCCCGCCA TAA CAGCGGGC             AGGAGGATTTAGAAC 100 34
SH07_RS10820 2180725 .. 2180744 - -10.7  -4.95957   GAAATGAATCAAAAA            GCCCGCA GCAATG TGCGGGC             GTTAGTGTCAGCGCA 100 33
SH07_RS10815 2179388 .. 2179398 -  -2.6  -2.77118   GAGACCCAAAATCGA                 TTTT GTG AAAA                 ATGGCTTTAACTCGG  42 185
SH07_RS10810 2178379 .. 2178395 -  -6.5  -5.80003   GGAAGAAACAAAAAA              CAACCTG ATG CAGGTAG              CCAGTGAGCATATTG 100 281
SH07_RS10795 2174984 .. 2174996 -  -6.9  -3.48276   CGCGGTGGCACAGAA                CACGG CAG CCGCG                AAGAAGTCAGCCAGT  63 142
SH07_RS10790 2174373 .. 2174385 -  -3.3  -4.19238   TTCCCAAGGGGAAAA                CGCAC GAC GTGCT                GACCGGAAGTGATGA  60 192
SH07_RS10780 2173265 .. 2173276 -  -5.8   -2.7927   AAACACATCGAATCA                GCCT ATTT AGGC                 TATTTTTTCCACCAT  53 62
SH07_RS10715 2165297 .. 2165316 -    -2  -3.90744   GGGGGGGTTAAATAA            CGGAATCC AGGA GTTTTCCG             TCAGACCATATAAGT  51 41
SH07_RS22870 2164535 .. 2164556 -  -7.4  -3.64822   ATCGCTGTATTTAAA           GATTTCCT TAAAAC AGGAAATC            TTATTATCACTTCTC  66 192
         kil NONE
SH07_RS10700 NONE
SH07_RS10695 NONE
SH07_RS10690 NONE
        recT 2159513 .. 2159553 -  -8.3  -5.24129   TTTTCTCATAAAAAA  TATTTCAAGTTGGCGGTGC ATT ACACCGCCAGGCTGAATTA  TTCCTCTGAATTATC 100 23
         lar NONE
SH07_RS10675 NONE
SH07_RS10670 2158547 .. 2158557 -  -3.2  -4.04318   TCCAGATATCACAAA                 GCTC TCC GAAC                 GTTTTTATGACTCTC  56 272
SH07_RS10665 NONE
SH07_RS10660 2156546 .. 2156569 - -14.6  -2.80074   GCCTCCATAAGAGTA          GCCCGATACG CTTG CGCATCGGGC           GCTATCCTGGTTATT 100 36
SH07_RS10640 2152057 .. 2152067 -  -2.4  -4.21194   TCGCACTACGTAAAA                 CGGC GCA GGCG                 AAGCAAGAAAACTGG  58 88
SH07_RS10630 2151232 .. 2151260 - -12.5  -5.63504   AACTGCATAAAAAAA        TAGAGTCTGTCGA CAT CCGCCAGACTCTA        CAGTACACACAGCAG 100 53
SH07_RS10620 2148829 .. 2148841 -  -3.3  -2.94099   TTCCTGCATCAGATA                CCTCG CGT CCAGG                GAAAATTGAGCGCGG  44 6
SH07_RS10615 NONE
SH07_RS10610 NONE
SH07_RS10605 NONE
SH07_RS10600 2145223 .. 2145240 -  -8.5  -4.14739   CTATCTATTTGAAAA             CCCTTAA GTTG TTAAGGG              TAACTTTACATAAAA  79 73
SH07_RS10595 2144271 .. 2144319 -   -12  -3.23638   TGAAACAGTGATGAA CCTTCTGCCAGATCAATAAATC AGAAA AATTTAATGATATGACAGAAGG ATAGTGAGTTATGCG  86 47
SH07_RS10590 2143198 .. 2143219 - -10.1  -5.30155   GCAGTAAGTAAAAAA           TAGGCCCGA TAAC TCGGGCCTT            GTCAGTTATTGAAGA 100 45
SH07_RS10575 2140234 .. 2140256 -  -3.5  -3.63589   GAAAATACCGTTAAA          GCG-CGTAAT GCCG ATTACAACGC           GGCAGAAAAAATCCT  53 227
SH07_RS10555 NONE
SH07_RS10550 NONE
SH07_RS10545 2135106 .. 2135130 -  -4.1  -3.62597   GCGATGCTTGAACAA          CCGCTTCCTGC GCA GGACGATGCGG          CGCTGGAGAATTTTA  53 332
         tpx 2133838 .. 2133864 - -19.6  -3.06737   GAGTAAGCGCGAATA         TGCCTGATGGTG CAA CACCATCAGGCA         TATTAAATTATGCTT 100 33
SH07_RS10515 2128471 .. 2128512 -  -6.5  -3.92373   TATCCGATCTATAAA TGTAGGCCGGATAAGATGC GCTA GCATCGCATCTGGCATTCA  GGCAAGGTAGCTGGT  67 43
        pspF 2112237 .. 2112255 -  -2.3  -4.54047   CGATTGCACAGAAAA             TCCAGCA ACGCG CGCTGGC             GCAGGGGCTGCTCCT  63 272
SH07_RS10400 2105043 .. 2105054 -  -7.2   -4.0031   AGGCCGATGAAACAA                CCCC GCAA GGGG                 TATTACGCGTTTTTC  72 28
SH07_RS10395 2103319 .. 2103360 -   -16  -3.12351   TCTTTTTATAGTTAA TGGCGCGGCGCGTTACCCT CAGGC AGGATAATGCGCCGCG-CA TCCGACTATTACGTT 100 34
SH07_RS10390 2102959 .. 2102970 -  -2.2  -3.31144   GCTTTATCCGGACAA                CGAT ACTG ACCG                 ATCGTCTGCAATTAA  45 45
SH07_RS10385 2102724 .. 2102735 -  -2.2  -3.20348   CTTACTAATATTTAA                TGAC ATTT GCCA                 TTACCGTTTGTGTTC  43 10
SH07_RS10380 NONE
SH07_RS10375 NONE
SH07_RS10370 NONE
SH07_RS10365 NONE
SH07_RS10360 NONE
SH07_RS10355 2096846 .. 2096858 -  -4.8  -3.72374   CCCCAGCAACAAACA                GGCT CATAC AGCC                CCTAACCCTTTCATG  57 141
SH07_RS10350 2095779 .. 2095799 - -12.5  -3.71149   GTATAACAGAGATAA            CGGGCGGCA GAA CGCCGCCCA            TCTTTACCAACAGAA 100 44
SH07_RS10345 2094506 .. 2094539 -  -5.2  -2.78384   TTGGTGGCCATTAGA     GCGGCTGACAGTTT TACGCG AATCTGTCTGACGC      GGCAAGGTTAATATG  50 33
SH07_RS10340 2092510 .. 2092534 - -13.6  -4.42062   GAGCGGGGAAATAAA          CGGCCCATCC ATGAG GAATGGGCCG          TGAAAGGAGATTACG 100 36
SH07_RS10330 2090223 .. 2090253 -  -2.7   -4.8143   TGAATAATGCAAAAA       TTGCCGCTAAA AGAGAAGTG TTTAACAGCAA       CGGCTAATTATCATC  67 96
SH07_RS10325 2089987 .. 2090027 -  -3.2  -4.49756   CCTCAAATAGGAAAA  CCTGAAGGCACGATTG TTAAATCTC CCACGGTGCCTTCGGG  ATGTCTGGCGTAGAT  63 1
SH07_RS10320 2088987 .. 2089000 -  -3.8   -2.7263   ATTATTCCGTGAAAT               CTGC TCGCGC GCAG                GGTTATATCACGCAG  44 189
SH07_RS10315 2088560 .. 2088579 - -13.6   -5.0916   CGGTTAACATAAAAA            GCCACGGA TATA TCCGTGGC             TTTCGAATATTTTAC 100 123
        ribA 2084080 .. 2084114 - -11.6  -2.98947   TTGAAGTAACAACTA     TTTGCTTGCCGG TTATTTTGCTT CCGGCAAGCAAA     TGAATTACACAATGC  83 48
SH07_RS10275 2080922 .. 2080939 -  -3.4  -4.41087   ACAATGAAACAGAAA             CGAAAC GGGAAT GTTCCG              TCGTTATTCCAGACG  62 185
SH07_RS10245 2075957 .. 2075976 - -11.4  -4.46775   GATGTAAAAGACAAA            CGCGAGGC TAAG ACCTCGCG             TTTTGCTTTAATCAA 100 33
SH07_RS10235 NONE
SH07_RS10230 NONE
SH07_RS10225 2073303 .. 2073323 -    -9  -3.02166   CGGTTAATCAAAGTA            TGCCGGAC GTCAT ATCCGGCA            TTTTTACAGATTAAT  68 36
SH07_RS10200 NONE
SH07_RS10195 NONE
SH07_RS10190 NONE
SH07_RS10185 NONE
SH07_RS10180 2061954 .. 2061976 - -11.2  -4.45261   TAAAGAAAGTTAAAA           TGCCGCCAGC GGA ACTGGCGGCT           GTGGGATTAACTGCG 100 32
SH07_RS10175 2061358 .. 2061379 - -13.7  -2.94144   TCTCCAGTGAAATCA           CTGCGAGCC ATAC GGCCCGCAG            ATGCAATTATCTTTA 100 69
SH07_RS10170 2060798 .. 2060816 -  -2.4  -3.16914   ACGATTCATGAAAAT             GTCCTCTT TAT AAAATGAC             TAAAAGTTAAAATTC  43 46
SH07_RS10165 2060239 .. 2060261 - -14.2  -4.84017   AATTCCGCACAAAAA           CGACCCCGTA ATA TACGGGGTCA           ATAAGGACATGGTAT 100 49
SH07_RS10155 NONE
SH07_RS10150 2057832 .. 2057866 - -10.8  -4.22948   AAAACCGACTTAAAA     GGAAAATCACAGGCGC GAT GCTACTATGATTTTCC     TGAGGAGAACAGAGG  93 77
SH07_RS10145 2057383 .. 2057412 - -19.5  -4.08144   TTCAGTAAGCAGAAA       GTCAAAAGCCTCC GACC GGAGGCTTTTGAC        TATTACTCAACAGGT 100 28
SH07_RS10135 2056095 .. 2056113 -  -8.9   -4.1023   AAGGCCAAACAAGAA             CACGGTT GCAAA AACCGTG             CCCTTAAATATTGAA  83 48
SH07_RS10130 2054534 .. 2054556 -   -12  -2.67958   CAATATCTAAATGTA           CTGGGCACCA TTG CGGTGCCCAA           TAAGTTTACTCTTCC  83 52
         cls NONE
SH07_RS10115 2052339 .. 2052370 - -10.2  -4.57073   GATCCGCTTTAAAAA      CAATAAGGGCTGAC AGTT GTCAGCCCTTTTTC       ACGCTAAAAGCGATT 100 43
SH07_RS10080 2042096 .. 2042117 -  -9.4  -4.77567   AGTGGCATAAGAAAA           CGGCTCCC TGTTGT GGAAGCCG            TTATAGTGCCTCAGT 100 120
SH07_RS10075 NONE
SH07_RS10070 2041169 .. 2041185 -  -2.1  -4.45696   GGTAAACAAAAAATA              CGGCCCC AGA AGGGCAA              TGCCGTTCACTTAAG  60 32
SH07_RS10060 2039231 .. 2039247 - -13.7  -5.55769   CCGGACAATAAAAAA              TCCCGCC GCT GGCGGGA              TTTTAAGCAAGTGCA 100 53
SH07_RS10040 NONE
SH07_RS10035 2034556 .. 2034569 -  -3.9  -4.00042   CTGGCGATTAAAGAA               TAATC GTTC GATTA                CCGTAAACAAAGACG  58 4
SH07_RS10030 2034283 .. 2034296 -  -6.7  -2.55015   ATCTCACCGAAGTTA               CCACA TCGC TGTGG                TGAATTATGGTGGTG  55 33
SH07_RS10025 NONE
SH07_RS09985 NONE
SH07_RS09980 2021851 .. 2021894 -  -3.8  -3.65812   GGTGGTGGAAGATAA CCAGGGGCAGCGTG-TCTCCT CCA ATGAGATCACGCTAACGCTTG TCGAACCGTTCGATG  53 76
SH07_RS09970 2019573 .. 2019596 -    -6  -2.64144   CTTGCACTGAAAGAG          GGCGGACGC ACCACAG GCGT-CGCC          TATCGACTGCCAGAA  50 441
SH07_RS09955 2017478 .. 2017506 - -12.5  -2.67209   CAGGAATTTATATTA        TCTCCCCCGATTA CCG TCATCGGAGGAGA        TATAACTGTCAGGCA  88 34
SH07_RS09950 2016928 .. 2016955 -  -9.8  -5.24799   TGATAAAGACAAAAA        TGGCCGCAGG CTGTTACC CCTGCGGCCG         GTTTCGGGCGCATAT 100 74
SH07_RS09945 2016394 .. 2016419 - -13.3  -5.36441   GCCGGATACAAAAAA         GGCCGCAGG CTGTTACC CCTGCGGCC          GGTTTCGGGCGCATA 100 75
        lolB NONE
SH07_RS09905 2009293 .. 2009307 -   -10  -3.62522   CAACGTCTGGAACAA               GGTGAC GTT GTCACC               GAAACTCAGCTTGCC  80 45
SH07_RS09900 2008197 .. 2008210 -  -9.5  -5.76633   TTACAGACAAAAAAA               CCCGC CGCA GCGGG                TCTTTGAGCCGGGTT 100 44
SH07_RS09895 2006107 .. 2006128 -  -3.7  -3.48629   ATGAAACGCAAAAAC           GCTTCGTTAC TCG GTAACGT-GC           TCATGGGGTTGGGTC  51 322
SH07_RS09885 2005143 .. 2005166 -    -9  -2.80499   TAATATCTTAATAAT          CAACCTGTTA TTGC TAACAGATTG           CAGAAATGGAAATAA  67 89
        ychF 2003944 .. 2003961 - -11.3  -4.98531   CGGTGAAATGAAAAA             TCCACGC AATT GCGTGGA              TTTTATATACTTTTG 100 86
SH07_RS09870 2000291 .. 2000305 -  -7.2  -3.44848   GCCGGGTATGAAAGA               CAGAAA CGA TTTCTG               ATACATCAGAGTGAT  66 106
SH07_RS09860 NONE
SH07_RS09855 NONE
SH07_RS09850 1994958 .. 1994991 -  -9.7   -2.8372   TAGTGCTGAGTAAAT     TG-CCGGATGACATCA GAA CGATGCCATCCGAACA     GTGGCTTAACCCTGA  72 31
        treA 1992908 .. 1992919 -  -4.4  -5.24129   TCTGTGTAGAAAAAA                CCAT AGCT ATGG                 TGTTATCTGCCGACA  78 86
SH07_RS09830 1990616 .. 1990626 -  -4.6  -4.02253   CCAATAAGCCAGAAA                 GCCG GTG CAGC                 CTGGGGCGTCGATCC  62 493
        ldcA 1989411 .. 1989432 -  -2.2  -4.03234   TGTCTCTTATATAAA           CCCTACCA TATTAG CGGCAGAG            ACAGCGTTTTACTTA  53 60
        cvrA 1987359 .. 1987381 -  -7.8  -2.78816   CCATTGCCCATGATA           GTGTCCAT TAAAAGG ATGGACAC           TATTTCCCCGGAACC  61 280
SH07_RS09800 1982981 .. 1982996 - -10.4  -4.00532   CGTTTAAAGAGCAAA              CCCCTC AAAC GAGGGG               TTTTTTGTTGTTTTT  89 39
        nhaB 1980447 .. 1980466 - -13.6  -3.92659   GGGCGAAAAGGCAAA            CCGGGCAT TTAT ATGCCCGG             TAAGTTGTTATCAAA 100 36
SH07_RS09785 1979775 .. 1979792 - -12.7  -5.14965   AGCGGCAGGAAAAAA             GCGCTCC CGCA GGAGCGC              CGAATGGATTAGCGA 100 34
        hlyE 1976669 .. 1976709 -    -7  -3.28791   AGCGCTCTGTCATAA  TGAGAGTTACCCGATA CCTTATTAT CAACAGGTAACTCTCA  ATCTTTAAAAAACGT  61 100
SH07_RS09745 1974098 .. 1974114 -  -2.3  -4.10855   AAAAGCCGCTGAAAA              CTTACAA TCA TTACAAG              GCTACGATCCCAGCG  56 283
        minC 1972690 .. 1972710 -  -3.3  -3.29973   TTAAAAAGGGATCAA            TTTAACGGT TGA ACGGTCAAA            GCGTTTTCGACTAAC  47 1
SH07_RS09730 1971849 .. 1971865 -  -3.7  -3.37464   CGAGTAATGCCATAA              CTTATCC TCC GAACAAG              CGTTTGAGGAAGCCT  49 10
        minE 1971528 .. 1971555 -   -15  -4.76041   GAGAGGGATGAAAAA        CTCAAGGCAGAG ATAA CTCTGCCTTGAA         GATAAATGCGCTTTT 100 50
SH07_RS09715 NONE
SH07_RS09710 NONE
SH07_RS09705 1969570 .. 1969592 -   -12  -5.08824   CCGTTAGCTAAAAAA           CCGCGTCG TATTCAT CGACGCGG           TACATATGAAATATT 100 39
SH07_RS09690 1966380 .. 1966396 -  -5.1  -4.13945   ATCCTTATTGCAAAA              CCCAG TACCGGG CTGGG              AGAAGTGCTTGTGAC  65 136
SH07_RS09655 1961411 .. 1961446 -  -9.3  -3.70109   TACACGACCCAATAA    TACTTTGTACAATAT ACGCTA AAATTGTACAAAGTA     TAAATAAGATTTCAG  78 144
SH07_RS09650 1960399 .. 1960412 -  -6.7  -3.17725   TTTGAAAAACAACGA               CCTGA TCCA TCAGG                ATAATAACCTCTTGT  59 242
SH07_RS09645 NONE
SH07_RS09640 1959768 .. 1959786 - -10.2  -3.71527   CGTTAAGTATTGAAA             CGGACGTG TGG CACGGCCG             TTGTTTTTATAAATA  82 80
SH07_RS09635 1958904 .. 1958922 - -12.4  -3.81137   TGTTAAATATTGAAA             CGGGCGTA TAA CACGCCCG             TTGTTTTATTTATGT 100 84
SH07_RS09625 NONE
SH07_RS09620 1956300 .. 1956335 -    -4  -3.14647   ACTCACGACATTGAA    CTTCAAGGCGGCGT-AT TCT ATCACGCAGCCTTTTAG    ATGACACCCTTTGTA  49 22
        mnmA NONE
SH07_RS09610 NONE
SH07_RS09605 1953082 .. 1953111 - -12.9  -2.81326   GATAATCTTAATAAG       CAG-GCCGGACAGC ATC GCCATCCGGCACTG       ATACGAGGTTTATTT  91 35
SH07_RS09600 NONE
SH07_RS09595 NONE
SH07_RS09590 1949583 .. 1949609 - -15.2  -4.32201   GGAAGTAAGCGAAAA         GGGATGCGGCAT GTG ATGCCGCATCCG         GCTTAAATCCAAACT 100 40
SH07_RS09580 NONE
        potA NONE
        potB NONE
        potC NONE
        potD 1944257 .. 1944278 - -13.7  -5.26875   TTGCTAACTAAAAAA           CGGGCGGTA ATAC CACCGCCCG            CTTGCTGAATTAACG 100 35
SH07_RS09555 NONE
SH07_RS09550 1942934 .. 1942945 -  -7.2  -3.28712   TTGTGGGCCGGATAA                GGCG TTCG CGCC                 CCATCCGGAATAATA  64 64
SH07_RS09520 1936575 .. 1936592 - -12.7  -3.30701   GTTTAGCAAATTGAA             TCGCCCC GGCT GGGGCGA              TGGCTTAGCGGGAGT  95 30
SH07_RS09515 1932917 .. 1932928 -  -2.2   -4.1822   GGTTATTGTAATAAA                CAGA TAAG CCTG                 AATTATGGATGGTGA  55 120
SH07_RS09510 1931836 .. 1931855 -  -5.8  -4.11304   GTAATTTATAAATAA            GCATTAAC CCTC ATTAATGC             CTGCTACTGCTGATT  68 87
SH07_RS09500 1930249 .. 1930272 -    -3  -4.17491   AGGAAACGGTTAAAA          CACCGCGTCA GGAG TGTCGCAACG           TCACAGTGACCCATC  60 458
SH07_RS09455 1921832 .. 1921849 - -12.7  -3.25823   CGTTGGGGAGACTAA             GGCAGCC AGAT GGCTGCC              TTTTTTACAGGTGTT  95 43
SH07_RS09380 1908428 .. 1908475 - -11.8  -2.64194   TATAAACCTGATAAT GGGCGGTTGGCCTGATAAGGCG TTTA CGCCGCATCAGGCCGCCAGCAC CGATTGCCGGATGCG  83 66
         rne 1903646 .. 1903665 - -11.4  -5.69793   AGATGAAATAAAAAA            GCCCTGGC AGTT ACCAGGGC             TTGATTACTTTGAGC 100 47
        flgA NONE
SH07_RS09300 NONE
SH07_RS09295 1891887 .. 1891911 - -15.7   -2.6563   CGGTGTAACAATGCA          TTCCGGCCTGC AGT GCAGGCCGGAG          ATAATCTTCAGATCG 100 33
SH07_RS09270 NONE
SH07_RS09265 1885870 .. 1885901 - -12.2  -4.55016   AGAAAAAACTGAAAA      CGGCGGCAACCCGC GAAT ACAGGCTGCCGCGG       CGGGTCAGGATTAAA 100 36
SH07_RS09260 1885196 .. 1885211 - -11.8  -4.91852   TGCACGAAAAATAAA              GGGCGC GAAT GCGCCC               TCGTGATTAATCAGT 100 32
SH07_RS09255 NONE
SH07_RS09250 1883713 .. 1883728 - -11.8  -5.85244   AAGTAAAATAAAAAA              GCCGGG GCGA CCCGGC               AAAAAAAATCACTGC 100 44
        bssS 1883165 .. 1883181 -  -9.4  -3.74347   CCCAGAAATGGTAAA              GGCACC GGTGA GGTGCC              TTTTGGGTGGATGGT  81 50
        solA 1881944 .. 1881963 - -10.7  -4.57837   ATACTCCTGTAAAAA            CGGCCTC ATTCTG GAGGCCG             TAATGATGATTATTG 100 35
SH07_RS09235 NONE
SH07_RS09230 NONE
SH07_RS09225 1880371 .. 1880395 - -14.4   -2.9735   ACAGAATAAATATCA          TTGCCGGATG CGTGC CATCCGGCAA          CATTTCACGCTTACT 100 36
SH07_RS09215 1878060 .. 1878083 -  -7.4  -2.83233   TAAGCACACTAATTA          TGCGCCCGACT TCC AGG-GGGCGCA          ATCCAGAGAGCTTTT  59 109
SH07_RS09210 NONE
SH07_RS09205 NONE
SH07_RS09200 1876042 .. 1876060 - -10.3  -5.11063   ACGAGCCAATAAAAA             TACCGGC GTTAT GCCGGTA             TTTTTTTACGAAAGA 100 277
SH07_RS09180 1871624 .. 1871635 -    -3  -4.55295   CGGTTGATAAATAAA                TTTG CTGG CAAA                 CCCTACACGAAGTCG  63 28
SH07_RS09175 NONE
        opgC 1870207 .. 1870237 - -11.8  -5.03715   ATTATTCTCAAAAAA       GAACCCGCCACCAG TTT CTGGAAGCGGGTTA       TGGTCAGACTGGCGT 100 77
SH07_RS09135 1866159 .. 1866174 -  -4.6  -3.09273   TGTGCGCAAGACATA              TCGCAG CAAT CAGCGA               CGGGCAAGAAGAATG  51 19
SH07_RS09130 NONE
SH07_RS09125 NONE
SH07_RS09120 NONE
SH07_RS09115 1863283 .. 1863309 -  -9.5  -5.01811   GCAGGAAATCAAAAA         TAAAGCGTGAG GGGCA CTCACGCTTTC         GCTTAAACAGTAAAA 100 72
SH07_RS09090 1860037 .. 1860056 -   -10  -5.92337   ATATACGAAAAAAAA            GCCCGTAC TTTC GTACGAGC             TCTTCTTTAAATATG 100 39
SH07_RS09070 NONE
SH07_RS09065 1856480 .. 1856490 -  -3.2  -3.29511   TCGACTGGCTGATAA                 CGCA CTT TACG                 AGGCGAAAGAGACCG  47 134
        pgaA NONE
        pgaB 1850105 .. 1850130 -  -5.5   -2.9621   ACCAGAGTGAAAGTA         CGCTACGCATA GGGG TATGCATAACA          CCAGACATAATATAA  52 58
SH07_RS09045 NONE
        pgaD 1848332 .. 1848365 - -14.7  -2.84325   GTTCGGTAAAGAGGA     CTGCGTACGTTCGGCA CTT TGCC-AACGTACGCTG     CATGCCTACAGTTAA 100 90
SH07_RS09030 1846404 .. 1846414 -  -4.6  -3.34398   GCTGGGTTTCAAAGA                 CGGC ACT GCCA                 ATCCCGATAGCCAGA  53 500
SH07_RS09010 1843133 .. 1843147 -  -8.6  -3.72893   CACGGTTGCAGGAAA               GCTAAG GGA CTTAGC               CTGCGGCGGTTTTGT  73 201
        putA 1837209 .. 1837236 - -15.6  -2.63089   GACCACGTTAAAGAT        GCCGGAGGAGGT TGTA ACATCCTCCGGC         TACCTGTTTAACCTA 100 33
SH07_RS08985 NONE
SH07_RS08980 NONE
SH07_RS08975 NONE
SH07_RS08970 NONE
SH07_RS08965 1832695 .. 1832708 -  -2.3  -3.28712   GTTTGCTCCTTACAA               CAGCC CGCA GGCTT                CTTCAAAGGACAGAC  45 6
SH07_RS08960 NONE
SH07_RS08955 1830337 .. 1830352 -  -7.6  -4.19817   CCCACGTAGCGAAAA              TATGGC AGCC GCCATA               CGCCGCGTTAATTCT  76 508
SH07_RS08940 1829439 .. 1829456 -  -4.1  -2.73875   TCCTGTTGAAGATTA             GCCGTTA AGTT TAACTGC              CAGACCTGCGACATA  46 5
SH07_RS08935 1829158 .. 1829180 - -16.3  -4.84673   TGAAATAACAGAAAA           CTCCCCCGC GAGAA GCGGGGGAG           TCGCTGGTTAAACGT 100 33
SH07_RS08920 NONE
SH07_RS08915 1824744 .. 1824758 -  -7.1  -4.07568   TTGTGCGCCTGAAAA               GACGC GTTTA GCGTC               GCATCAGGCATTATG  72 141
SH07_RS08895 1819216 .. 1819246 -  -8.2   -3.7456   ATAACGATATTGAAA       TCCAGCGTAACCTG TTG CAGGAGATGCTGGA       ACGCCATCCAGAAAT  72 365
SH07_RS08885 NONE
SH07_RS08880 1814418 .. 1814428 -  -2.4   -4.8236   GAGTTAAAAAAACAA                 GCCG AAA CGGA                 AATCGCCGACTTTAT  68 210
SH07_RS08860 1813208 .. 1813219 -    -3  -3.04398   TTCTTTGTGGAAAAG                TAAC TGAT GTTA                 TAATGTATGATGTTG  44 93
SH07_RS08850 NONE
SH07_RS08845 1811702 .. 1811725 -  -9.6   -2.7806   TGCAAATCTCTAAAG          CCCGGT-ACGA ATA TCGCAACCGGG          TATCATTTAACTTTA  70 63
SH07_RS08840 NONE
SH07_RS08835 1810251 .. 1810270 -    -3  -4.14739   CCAGGCAGCTTAAAA            GAT-AAGAA TTC TTCTTCATC            AGTCAGGAACACGTT  58 24
SH07_RS08830 NONE
SH07_RS08825 NONE
SH07_RS08820 NONE
SH07_RS08815 1804251 .. 1804274 -   -14  -5.31456   GTAATGCATAAAAAA          GAGCATTCAG TTAC CTGAATGCTC           TGAGGCTGATGACAA 100 105
SH07_RS08760 1793916 .. 1793938 - -13.5  -5.48213   CAGGCAAAAGAAAAA           GGGGTTAGC ATTTA GCTAACCCC           TTATCTTATTTGGCG 100 36
SH07_RS08755 1793037 .. 1793063 - -10.1  -5.46657   CAGTGTAACAAAAAA         CAAAGCCCCGC ATAAA GCGAGGCTATG         AAAGTGTTAGCGGGT 100 45
SH07_RS08750 NONE
SH07_RS08740 1791064 .. 1791088 -  -2.2  -2.71924   CACCTCCCGGGAAAT          CTTTACCTTT GATAT AAGGGTAAAA          TTCCACATTTCAAGT  40 40
SH07_RS08735 1790688 .. 1790715 - -17.8  -5.63517   TGGCCAAATAAAAAA        TCCCCGGAAGGC AAAA ACCTTCCGGGGA         TTTGTTCAGGGATTA 100 38
SH07_RS08725 NONE
SH07_RS08720 1789412 .. 1789425 -  -8.1   -4.7889   ATAAAGACCGAAAAA               GCCTG CGCA CAGGC                ACAAAAATCTCAGGA  91 35
        mgsA 1788854 .. 1788873 - -13.6  -4.24711   GAAAACCGTAAGAAA            CAGGTGGC GTTT GCCACCTG             TGCAATATTACTTCA 100 33
SH07_RS08705 NONE
SH07_RS08700 1784065 .. 1784077 -  -7.7  -3.57144   TCTCTTACGCCGAAA                CAGGA GTT TCCTG                CGGAACTTGAGTAAT  68 2
SH07_RS08690 1782519 .. 1782539 -  -4.7  -3.64703   CCCTGGCGATGTAAA            GTCTACAAC GTA GTTGAAAAC            TTACAAGTGTGAACT  57 220
SH07_RS08680 1781290 .. 1781326 - -13.2    -3.794   GTTCAATTTACTAAA   GGCAAAAAAAACCCCGC AGCA GCGGGGTTTTTCT-ACC    AGACGAGAACTTAAG 100 36
SH07_RS08670 1778858 .. 1778872 -  -5.7  -2.77895   TGTACGCTGAACAAG               TCCGA TCAGT TCGGA               ATAAACCAGTTCAGC  53 16
SH07_RS08665 1778224 .. 1778248 - -18.7  -4.56597   CTGTCTCTTTAAAAA          GAAACCTCCGC ATT GCGGAGGTTTC          GCCTTTTGATACTCT 100 53
SH07_RS08630 1768677 .. 1768698 -  -2.3  -4.09739   TGAATCTGGCGAAAA           TGCC-GCA CTATGCC TGCTGGCA           CAACCCTGCGTTGTT  56 142
SH07_RS08580 NONE
SH07_RS08575 NONE
SH07_RS08570 NONE
        ssuC NONE
        ssuB 1755566 .. 1755595 - -20.1  -4.06419   TGGCTTGATAAATAA       CCGAATGGCGGCA ATAG CGCCGCCATTCGG        GGAATTTACCCCTGT 100 31
SH07_RS08550 1751452 .. 1751469 -  -9.1  -5.58209   TTAAAGGTAAAAAAA             GGGAGCC GATT AGCTCCC              TGATGATATTAACTG 100 34
SH07_RS08545 1749875 .. 1749894 - -13.6   -5.9362   GAAAAGATAAAAAAA            GAGCCAGC GGGC GCTGGCTC             TTGAAGACGCTAAAT 100 40
SH07_RS08540 1748171 .. 1748186 -    -9  -5.97575   AAGGTATAAAAAAAA              CAGGAC CAAA GTCCTG               TTTTTTCGGCATTTA 100 57
SH07_RS08530 1746635 .. 1746653 -  -4.4  -5.38951   AAGGCACATAAAAAA             GCCCGCTT TTA ATGCTGGC             CTGGATTTCTGGCAA  81 215
SH07_RS08490 1734697 .. 1734712 -    -4  -3.58343   CGCAGCATGTTGAAA              GATTCGC GCA GCGA-TC              AGTTACTGGCGATGG  53 259
SH07_RS08415 1717122 .. 1717144 - -11.3  -2.86654   CAAATATATGTAAAG           CGGGGCATT AAAAA AACGCCCCG           TAATATAACTCAGAC  81 77
SH07_RS08410 1715883 .. 1715900 -    -2   -3.1247   AGCTCGGACATGTAA             CACCTA CCTTCT TAAGTG              GATTTTTTATTTACT  43 58
SH07_RS08405 1713534 .. 1713553 - -11.4  -5.00616   TCTCGCGCTAAAAAA            GGCCCCAC TTTC GTGGAGCC             TTTATTGTACGCTTT 100 68
        pflA 1712628 .. 1712651 - -13.2   -5.4505   GCGCGGAATAAAAAA          GCGGCAACTC AATA AAGTTGCCGC           TTTACGGGGAAATTA 100 38
SH07_RS08390 1710667 .. 1710678 -  -2.2  -2.93715   ACAATCTCTATAAAT                GGCT GTTG AACC                 TTAATTCGGTAGTGA  41 331
SH07_RS08375 1707230 .. 1707247 -  -9.8  -3.89572   AGCTAATCATAACAA             CCGGGG TTTCGG CCCCGG              TTCTCTTTTATTTCT  84 33
SH07_RS08330 1693353 .. 1693379 -  -9.5  -5.04249   CGGGGAAAAAATAAA        GGCGAC-CCATA GTCG CATGGTGTCGCC         TTCTTTACTTTTGTT 100 55
SH07_RS08325 NONE
SH07_RS08320 NONE
         aat 1688893 .. 1688903 -  -8.2  -3.40622   TACTCCGAAAACACA                 CGGC TAA GCCG                 CACCAAAAGCGCAAC  71 174
SH07_RS08310 1688490 .. 1688506 - -10.1  -5.56263   ATCACAAAATAAAAA              GGCCGGT TAA ACCGACC              TTTTACTCGTTCTTT 100 68
SH07_RS08305 1688175 .. 1688194 -   -10  -5.82388   AAATGCGAAAAAAAA            GCTCGCAC TTTC GTACGAGC             TCTTCTTTAAATATG 100 39
SH07_RS08290 1684633 .. 1684653 - -12.6  -4.96848   TTTTTGAGATAAAAA            TGCCAGCC GATCG GGCTGGCA            TTTTGCCTTTAGGAT 100 62
SH07_RS08275 1680164 .. 1680181 -  -6.9  -3.61715   CAGCCTGTTGAATAA             CGATCGG GAAG CCGAACG              AGAACATTTAACGGC  63 296
SH07_RS08265 1678476 .. 1678490 -  -3.5  -3.81926   TATTTTAAAAACGAA               GGCGA GTCAT TCACC               AGATAAATAAATCCA  56 119
SH07_RS08260 1677644 .. 1677664 - -11.1  -5.46629   AACATCTTAAAAAAA            GGCCTGACA TTA CGCCAGGCC            TTCTGCGTTAATTAA 100 37
SH07_RS08255 NONE
SH07_RS08250 NONE
SH07_RS08245 1673471 .. 1673496 - -11.9  -3.38581   ACTAACGGTTAAATA         GCCCGATGAAA GGAA TATCATCGGGC          ATAAGGCGATTATGC  89 35
SH07_RS08240 1671618 .. 1671648 -  -2.6  -2.89569   TGCGTAAATCAATCA       TGGCATGTCC TTATTATGACG GGAAATGCCA       CCCTTTTTACCTTAG  42 32
SH07_RS08235 NONE
SH07_RS08230 1669107 .. 1669164 -    -3  -2.50387   GTTGAGAAAATAACG TGCG-CATTCTTCCGTGATTTCCCCCATG ATG CA-ATGGGAAA-CATGAAAGAATAACGCA GGTTTTGTCGATTAA  42 37
SH07_RS08225 1668021 .. 1668038 -  -3.3  -3.92641   AAGCGGATGCAGAAA             CTCAGGC GATT GCCGAAG              CATTGCTGGAGAAAT  55 51
SH07_RS08210 1666217 .. 1666245 -    -9  -3.96148   GTCGGCGAGCATAAA       TGT-CGGCATTCC TCAC GAAATGCCGGACA        ATTTACGGGGTTTAT  80 56
SH07_RS08205 NONE
SH07_RS08200 NONE
SH07_RS08195 NONE
        artM 1663021 .. 1663047 - -12.4  -5.74086   AAATGAAATAAAAAA         GACGGACAAC TTAGTGG GTTGTCCGTC         TTCATTATAAGAATT 100 168
SH07_RS08185 1661974 .. 1661987 -  -9.5   -5.5604   TGAAGCAATAAAAAA               GCCGC ATGT GCGGC                TTCAGATTGCTGACA 100 206
SH07_RS08125 1652784 .. 1652816 -  -6.9  -5.40625   ACAGCACAGAAAAAA      TCAGTAAAGCCCTCA ACG CGAGGGCTTGTCAGA      CGATCAGGCGTCCAG  89 29
SH07_RS08115 1650309 .. 1650345 -  -3.7  -5.60689   TTAGATAACAAAAAA    CCCATCAACCTTG AACCGAAATGG CGGGGTTGATGGG    CTCCACAAAATGGGG  89 138
SH07_RS08105 NONE
SH07_RS08100 1647551 .. 1647568 -  -3.5  -3.31799   GACAATTTTTCATAA             TCATTTC GCCT GAAATAA              TGCAGCGGGTTAATT  49 97
SH07_RS08095 1647235 .. 1647261 -  -8.7  -5.47399   CGAAGGGTAAAAAAA         TGCCTGACTGC TTTGT GCGATCAGGCA         TTCTCGAATTAATGG 100 34
SH07_RS08085 1645073 .. 1645097 -    -3  -3.02461   TAATCCCTCTGAATA         GTTATTGAAGCG AGC CGCT-CAATA-C         TACACTTTTTAGCAG  44 44
SH07_RS08080 1644265 .. 1644289 - -12.1  -3.30159   TTAATCTTCTGATAA          CCGGATGGCGC GAA ACGTCATCCGG          TTATACGTCATTAAT  89 36
SH07_RS08070 1641812 .. 1641827 -  -2.4  -4.92239   GCAAAAAGGCAAAAA              CTACGG CTGG CCGCTG               GCAACCTGGGGAATC  71 376
        rimO 1638991 .. 1639033 - -11.5  -2.78018   AGCTGGCAGTAATCA TTATTCGCAGGCCGGACAAA TGAT TTTGCCCGGCCTG-AATTAA TTAAACCCGGCTACC  81 26
SH07_RS08015 NONE
SH07_RS08010 1626471 .. 1626489 -  -3.7  -4.11692   CAGCGAGTTTCAAAA             CCCCGCG TCAGG CGCTGGA             CTGCTTACTGGCAGG  60 240
SH07_RS08000 NONE
SH07_RS07995 1622463 .. 1622493 -   -11  -2.74012   TGATGATGTGAATGA       TTTAGCCCGGCGAC GAC GCCGCCGGGCCGAG       GAGATTACAGCATAT  77 30
SH07_RS07990 1621510 .. 1621528 - -11.7  -4.43173   AAAAAGAAGGGAAAA             CCGGAGC GCACG GCTCCGG             TAGAGAGGTCAGCTG 100 34
SH07_RS07985 1619940 .. 1619964 -  -8.5  -3.79633   GACAAATGCAAAATA          GCCTGATGCGC TAC GCTTATCAGGC          CTACGCAGTACCTGC  75 181
SH07_RS07975 1617108 .. 1617126 -  -8.8  -5.63517   CTGGCAAATAAAAAA             GGCGGATT ATG AGTCCGCC             TTTTGCTTTAAGTTT 100 47
SH07_RS07960 1615174 .. 1615193 - -10.7  -3.12402   GAAAGCAGGAGTGAA            GCGGCGT ACCGCG ACGCCGC             TATTTATCGGAAGGT  79 25
SH07_RS07955 1613311 .. 1613328 -  -8.4  -5.36441   TGGTGATATAAAAAA             TCCGCC TCTCGG GGCGGA              TTTTTGTTTTTAAGG 100 35
SH07_RS07945 1611496 .. 1611525 - -16.7  -3.96827   AAAAGTAGCGAGAAA       TTCTGCATGGTTA TGCA TAACCATGCAGAA        ATGTAAATTTAATTA 100 34
SH07_RS07940 1610670 .. 1610690 - -13.3  -5.07652   GGCTGCAAAACAAAA            CGGCCTCCT GTC AGGAAGCCG            CTTTTATCGGGTACT 100 67
SH07_RS07935 NONE
        glnH NONE
        glnP 1608789 .. 1608800 -  -4.4  -2.95448   TTAAATTCAATCACA                GGAT TTTC ATCC                 TTCTTTCCAGACGAC  47 9
        glnQ 1607925 .. 1607944 -  -6.4  -3.30006   AGGAAGGGATATTAA            GCAGGTTG CTGA CAACGTGC             GGGCTTTTTTGCCGG  59 146
SH07_RS07915 1605543 .. 1605560 -  -5.5  -3.15544   CTGGACCTTTATGAA             CGACGAGC AGC GC-CGCCG             TTTTGTCAATCGCCA  53 44
SH07_RS07905 1604084 .. 1604105 -  -7.3  -4.48903   CAAAACAGACGAAAA           CTGCATCCA GAGG CGAATGCAG            TTACGTTGGTGGGGT  78 40
SH07_RS07900 1601548 .. 1601565 - -12.7  -4.58283   CAATTTCTCCAAAAA             GTGGGGC CTGC GCCCCAC              ATCTGAATCAGAAAT 100 33
SH07_RS07895 1600854 .. 1600865 -  -2.2  -2.73364   CGGGCAGTTCAAGCA                TCAG ATCT CCGA                 CCATTCCCGCAGCAG  40 14
SH07_RS07890 NONE
SH07_RS07885 1599767 .. 1599788 - -13.7  -5.81412   GCCAGCTAAAAAAAA           GCCCGTCCA GTGG CGGACGGGC            AAACAAGGGTAACAT 100 226
SH07_RS07865 1594477 .. 1594514 -  -6.9  -4.86033   AAACCTGCAGAAAAA   CCGTCTCGCCGCCTCGGC GAT GCCAAACCGGC-AGGCGA   ACAACAACGTCGCCG  85 303
SH07_RS07855 NONE
SH07_RS07850 NONE
SH07_RS07845 NONE
SH07_RS07840 NONE
SH07_RS07835 1586951 .. 1586963 -  -4.8  -3.54475   TTCTTCAGGAGAGAA                GCCA TGAAG TGGC                AACAACGTGTTCGTG  53 388
SH07_RS07825 NONE
SH07_RS07820 NONE
SH07_RS07815 1583607 .. 1583617 -    -4  -3.31144   GGCCCATTTGGATAA                 TAAG TTG CTTA                 ATGATTGTGTTATGG  49 274
SH07_RS07775 1578994 .. 1579014 -  -8.3  -2.64616   CCTGGAGTCAGATTA            TCCGCGCTA CAG TAGCGCAAA            TTGCGGGGAAACAGC  63 225
SH07_RS07770 1577909 .. 1577933 -  -8.5  -3.79633   GACAAACGGAAAACA          GCCTGATGCGC TAC GCTTATCAGGC          CTACATTTTCTCCGC  75 155
SH07_RS07740 NONE
SH07_RS07735 1569724 .. 1569750 - -13.8  -2.53759   AATACCTTTAAGTGA         TACCAGATGGCA TTG CGCCATCTGGCA         GAGTGATTAACTAAA  93 32
SH07_RS07730 1568285 .. 1568296 -  -7.2  -3.30124   CCGTAGGCCGGATAA                GGCG TTTA CGCC                 GCATCCGGCAAATAG  64 51
SH07_RS07710 1561852 .. 1561866 -    -7   -4.7373   CTACTGCATGAAAAA               GGCCGC TAT GCGGTC               GGGCAGGGACCAATG  85 105
SH07_RS07700 1559929 .. 1559949 -  -9.7   -3.2964   AAAGTGTGTCGATAA            CCGCCTGAT TAA ATCAGGTGG            CTATAAATGAACTGG  76 13
SH07_RS07675 1556168 .. 1556199 -  -3.7  -4.30719   GTGTTTCATAACAAA      TTGTCAACACGCT TAGCAC AGCGTGGCGATAA       TCACGCTGTCGGCAT  63 6
SH07_RS07670 NONE
SH07_RS07665 NONE
SH07_RS07660 NONE
SH07_RS07655 NONE
        galM 1550098 .. 1550114 - -10.1  -4.14193   ACAATATGAGATAAA              GCCCTCA TGA CGAGGGC              GTAACATTACTCAGC  88 32
        gpmA 1549122 .. 1549142 -  -8.3   -5.5112   GTTAGCAACAAAAAA            GCCGACT CACTTGC AGTCGGC            TTTCTCATTTTAAAC 100 50
SH07_RS07635 NONE
SH07_RS07630 1547220 .. 1547239 -  -9.3  -4.78661   AGTGAAAAATTAAAA            GGGAGAG ACTCCG CTCTCCC             ATTATTGGCTATTTT 100 47
SH07_RS07625 1546170 .. 1546200 - -15.5  -3.15544   CCGGATGTGGATCAA       CAGCGCACGTGAA AGAGG CTCACGCGCGCTG       TCCCATTAATGGTGA 100 31
SH07_RS07505 1527095 .. 1527106 -  -2.2  -4.60924   GAAATGTTCGAAAAA                GATC CGCA GACC                 GAAGCGATCGTGATG  66 396
        gltA 1515455 .. 1515482 - -12.8  -4.99035   TTAGGCATATAAAAA        TCAACCCGCCAT ATGA ACGGCGGGTTAA         AATATTTACAACTTA 100 52
SH07_RS07445 1514526 .. 1514543 -  -9.8  -3.76781   AAATATTTTATGAAA             GGCGGC GATGAT GCCGCC              AAAATAATACTTATT  84 36
SH07_RS07440 NONE
SH07_RS07435 NONE
SH07_RS07430 1510210 .. 1510237 - -13.6  -3.35522   CAATTTTCTGAAAGA        GATGCCCTTT-CC GGC GGCAAAGGGCATC        ATGGTAAATCAGTTA 100 34
SH07_RS07425 NONE
SH07_RS07395 1503347 .. 1503388 - -10.2  -3.46936   AAATTGCAGGAAATA CGTAGGCCTGATAAGACGC GTCAA GCGTCGCATCAGGCAT-CG GTGCTGGCCTATTAA  80 37
        kdpF NONE
SH07_RS07335 NONE
SH07_RS07330 1487321 .. 1487334 -  -8.1  -2.65766   GTAAACCTCACACCA               GACCG CAAA CGGTC                AGCAGTAAATCAATG  60 4
SH07_RS07325 NONE
SH07_RS07320 NONE
SH07_RS07315 1483323 .. 1483342 -  -6.4   -5.0916   TGTTTAAGATAAAAA            GCCGTATT TATT ATTACGGC             TTTAATTAATAAAAG  87 64
SH07_RS07305 NONE
        potE 1479234 .. 1479253 -   -10  -4.46072   GCCAACAAACAGAAA            GGGCGATC ATTC AATCGCCC             TTTTTTACTTTGTTT 100 43
SH07_RS07295 1478992 .. 1479002 -    -4  -2.61322   ACATTTTTTAAATAT                 TAAG TTC CTTA                 TATTTGAATAAAAAA  45 69
SH07_RS07290 1477952 .. 1477964 -  -6.9  -2.53822   CTTACCTGATAATAC                CCGCC GCT GGCAG                TTGTCAGGCGGGAAC  52 333
SH07_RS07270 1474251 .. 1474272 -  -7.9  -2.94232   TTCGGGGGAAACAAT           CAGCCAGGC CTCT GCCCGGATG            GATAGCGCGCCATAA  62 116
SH07_RS07265 1473892 .. 1473905 -  -2.3  -2.90227   GCGGAATCAGCAAAC               GAGCA GGAC TGCAC                ACTGTGCTACATGAA  41 50
SH07_RS07260 1473227 .. 1473254 - -16.4  -3.19463   GGCATTATCTATTAA        TACGGCGTAGAC ATGA GTCTACGCCGCA         TCACATCAGGCATTG 100 31
SH07_RS07250 NONE
         fur 1472488 .. 1472505 - -11.3  -5.24129   CCCTTGCATAAAAAA             GCCAACC CGCA GGTTGGC              TTTTCTCGTTCAGGC 100 45
        nagB 1465102 .. 1465125 -  -8.9  -3.08726   GATTTTAAAAAATAT          TGCCCTGAGC AAGGA GC-CAGGGCA          GGGATAACAATTACA  69 36
        nagA NONE
SH07_RS07210 1462665 .. 1462678 -  -3.9  -3.37975   ATGGACTACCCAGAA               TATTG ACAA CAATA                AGCGCCACTATAAAA  49 46
SH07_RS07205 1461559 .. 1461573 -  -7.8  -5.40072   GCTTGTTTAAAAAAA               TGCCGC AAA GCAGCA               CTGTGCGCAAGCGAT 100 351
        asnB 1459797 .. 1459831 - -16.6  -3.66732   CAAGCACCTCAATAA    CTGAAACAGCCCCGG ATTTCA CCGGGGCTGTTTC-G     CATTTCTTACTTATA 100 32
SH07_RS07195 NONE
SH07_RS07190 NONE
SH07_RS07185 NONE
SH07_RS07180 1459051 .. 1459067 -    -3  -3.33815   ATGTGCTCTAACCAA             CTGAGCT ACGT AGC-CAG              ATTGTTTCTTCGATG  47 39
SH07_RS07175 NONE
SH07_RS07170 NONE
SH07_RS07165 1458729 .. 1458744 - -10.4   -5.1417   GCAGAAAAGCAAAAA              GCTCGC CGAA GCGAGC               TTTTTTAATGTGGCT 100 36
SH07_RS07155 1455826 .. 1455851 -  -9.7  -5.51046   TAAAGAGAGAAAAAA         CAAGGCCCACCG GAA CGGCAGGCC-TG         AGAATTACGGCTGAT 100 30
SH07_RS07150 NONE
SH07_RS07145 1454145 .. 1454168 -  -8.8  -4.43477   GTTAGTTAATCAAAA          CGCCGTCGTT AATC ACCAACGGCG           GGGACGTCTGCCAGT  93 56
SH07_RS07140 NONE
         lnt 1451379 .. 1451397 -  -6.1  -3.05463   ACCTTCCTTAGGTAA             CATTTAG TTTGG CTAAATG             TAAAGATATTGCTGT  56 296
SH07_RS07130 1450275 .. 1450286 -  -2.2   -2.7186   AAATGCCTTGAATCA                GCCT ATTT AGAC                 CGTTTCTTCGCCATT  40 61
SH07_RS07125 1449014 .. 1449041 - -16.4  -5.26316   CTACTCCAGAAAAAA        GAGGGTAGCAGC GTTA ACTGCTACCCTC         GAAGATTGTTACCCA 100 148
SH07_RS07120 NONE
SH07_RS07115 NONE
        artP NONE
        rihA 1445753 .. 1445790 -  -9.3  -3.77089   AAAAAGAGATAAACA   GATTAAGACCACC-CAGG TAA CGCGTGGTGATCTTAATC   AATGACGTGTGTTAA  81 37
SH07_RS07100 1443842 .. 1443861 -  -2.8  -3.21416   GAGCCGGAGGATGAA            GATGTCGA TGAG CCAACACC             TGAAAATCATGAAGA  45 212
SH07_RS07085 1440856 .. 1440866 -    -4  -3.58905   ACGCGTGATACAGAA                 CATA CCT TATG                 GCCATTATATCTAGT  53 336
SH07_RS07070 1437859 .. 1437882 -  -7.4  -2.72851   CAATAAAGAGAATAT          GGGCCGAATGA AAT TC-CCCGGCCC          TTGTTTTTATCTCTA  58 38
        leuS NONE
SH07_RS07055 1433922 .. 1433933 -  -2.2  -3.28712   TTGTTCCGGGTACAA                CCGA ATCA TCAG                 TTACCCAGCGTGGTG  45 22
        holA NONE
SH07_RS07045 1432252 .. 1432266 -  -2.8  -2.90075   CCCTCCGTAACGACA               GGTATC AGC GATACA               AGCCTTGTTGGTTAA  42 15
SH07_RS07040 1431461 .. 1431477 -  -6.5  -3.53343   AATCGGCTTTCGAAA              GTGGGCT ATC ATCCCAC              CCCGCGCCGCAGATT  61 169
SH07_RS07035 NONE
SH07_RS07030 1430565 .. 1430593 -  -8.2  -2.78679   GTTTTCTACTCAAAG        CTCCCTTATCAC TCACG GTGATAAGGATG        GTTGGTGGTGATGCT  64 5
SH07_RS07025 NONE
SH07_RS07020 NONE
SH07_RS07015 NONE
SH07_RS07010 1425000 .. 1425019 -   -15  -3.50456   GTAATTAAATAGCAA            CTCCCGCC AGAA GGCGGGAG             TTTTTTACTGATGCT 100 83
SH07_RS07005 NONE
SH07_RS07000 1423927 .. 1423948 -  -5.1  -3.24456   AGATATTATGAGTAA           TGACCCAGT GTAA ATTGGGCCA            TTGATGTATGGAATT  55 39
SH07_RS06990 1422660 .. 1422676 -  -2.1  -3.62864   GAAACGGACCTGAAA              GCAGCCA AAG CGGTCGC              GAAAATGTAAAATTG  49 99
SH07_RS06985 1421522 .. 1421539 - -11.3  -5.36441   GTTCGATACAAAAAA             CCCGCTT CAAA AAGCGGG              TTTTTTATCAGACAG 100 62
SH07_RS06970 1419850 .. 1419866 -  -9.4  -4.36729   AGCAAGAATTCAAAA              CCCGCT TAATC AGCGGG              TTTTTTTTGGTCTTT  88 39
        dcuC 1416877 .. 1416899 - -13.4   -4.0162   GGGTGACATGATAAA           GCCGGAGGAA ACT TGCCTCCGGC           ATTACTATTTACTTG 100 34
SH07_RS06940 NONE
SH07_RS06935 NONE
SH07_RS06930 NONE
SH07_RS06925 NONE
        citX NONE
        citG NONE
SH07_RS06910 1407383 .. 1407410 - -18.5  -5.42265   TTAAATCATAAAAAA        GCCCGCCAGGT GGGCTT ACCTGGCGGGC         GTGATGATTTATTCA 100 57
SH07_RS06905 1406350 .. 1406372 - -12.7  -5.11836   ATACCCAAAAGAAAA           CCCTCACCG TCAGG CGGCGAGGG           TTTAACTCACATGAT 100 175
SH07_RS06900 1405828 .. 1405847 - -12.2  -3.53811   CTGATTTTGCGTAAA            GAGGATGC GAGT GCATCCTC             TGGGCAAAGCGAGTT  91 60
SH07_RS06895 1405223 .. 1405248 -  -7.5  -3.75153   GGTTTTGAAGCGAAA         GGCAGCACCAC GGAA ACGGTGCTGAC          TAACCTGAAACTGGA  69 432
SH07_RS06885 1403717 .. 1403744 - -14.8   -4.7373   TTATGGCATTAAAAA        GCCCCGCCGGGA TGGC TCCGGGCAGGGC         GGGATACTTATTCTG 100 45
        dsbG 1400060 .. 1400070 -  -3.2  -4.08692   TAAGTTTTTCTAAAA                 TAGC ACA GCCA                 CTTAGGGCAGAGCGA  58 107
SH07_RS06865 1398902 .. 1398914 -  -5.5  -3.09202   ATAGACATCTGAAGA                CGCTC TCT GAACG                TTACAGGGTGATCAG  53 152
SH07_RS06860 NONE
SH07_RS06855 1396722 .. 1396738 -  -3.5  -3.01712   CCTTTTCGGTGAATA              CCCCGGC ACA GCTGGCG              CTTGCTGATATGCTA  46 359
SH07_RS06845 1394453 .. 1394464 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG TTCA CGCC                 GCATCCGGCACTCTT  64 275
SH07_RS06805 1385876 .. 1385898 -  -3.4  -3.12351   GCGTCCGACAGTTAA           TGCTTAAAAC AGC GCCTTAAGCC           TATCCAGCACTTGCA  46 6
SH07_RS06795 NONE
SH07_RS06790 NONE
SH07_RS06785 1381685 .. 1381697 -  -7.7  -2.98789   ATCCAGAAAACAGGA                TGCCA TGA TGGCA                GACCACTTAGTTTAA  62 37
SH07_RS06760 1372519 .. 1372548 - -14.3  -3.30124   TTGTAGGCCGGATAA       GGCGTTCACGCCG CATC CGGCATGAACGAC        GCGCACTTTGTCAAC 100 56
SH07_RS06755 1371526 .. 1371552 -  -3.6  -5.34365   GGAGAATAACAAAAA         TGGTCATCTGGA GCT TACAGGTGGCCA         TTCGTGGGACAGTAT  80 257
SH07_RS06735 1368527 .. 1368538 -    -3  -3.29043   AAGGGTGTTTCATAA                CATT GTTA AATG                 TAAGTTAAAACACCA  47 77
SH07_RS06730 1368260 .. 1368274 -  -5.6  -2.71364   GTATGCCGCGAAGTA               CGGCGA TAA TCGACG               TTTAATCCGCCAGCG  52 27
SH07_RS06725 NONE
SH07_RS06720 1367069 .. 1367086 - -14.1  -3.50588   ATCTGAGAGGAAATA             GCCGGGC AGAT GCCCGGC              AAGAGAGAATTACAC 100 35
SH07_RS06715 1365705 .. 1365731 - -16.7  -3.63895   GTCAACCATCCGAAA         CCGCTCTCATC CATTC GATGAGAGCGG         TTTTTTTAATTACTG 100 35
SH07_RS06685 NONE
SH07_RS06680 NONE
        nfrB NONE
SH07_RS06670 NONE
SH07_RS06665 1349379 .. 1349405 - -13.8  -3.44487   GATGAGAGCGAAAGA         GGTAAGCCAGGT CGT ACCCGACTTACC         TGGAGGAGATTTAAT 100 36
SH07_RS06660 NONE
SH07_RS06655 1348280 .. 1348301 - -10.9  -2.78465   ACTGAGACACATAAG           GCCTCGCAA TGGC TTGCAAGGC            TTTACATGTTTTGAG  77 86
SH07_RS06650 1346617 .. 1346645 -  -3.2  -3.16564   CTCTTATTCTATCAA       TGTCGTAGCC-CA GAAA TGTGGCTATAACA        GTACTTCATATTTCA  45 385
SH07_RS06635 1344239 .. 1344255 -  -2.1  -5.80003   GGAAGAAACAAAAAA              CAGCCTG ATG CAGGTAG              CCAGTGAGCATATTG 100 247
SH07_RS06615 1342263 .. 1342274 -  -4.4  -4.13561   TTCGTGTAAAAAATA                TGCT TAAT AGCA                 CCATTTCTATGAGTT  62 327
SH07_RS06605 NONE
SH07_RS06600 NONE
SH07_RS06595 1340852 .. 1340866 -  -3.5   -4.4521   ACTATGCAAAAACAA               CTGGA AGGAA CCCAG               AAGTATATTAATGAG  67 84
SH07_RS06575 NONE
SH07_RS06570 1336697 .. 1336716 -  -9.2  -4.88129   AAAAATTATTAAAAA            TGGGGCGT TGAG ACGCCCCC             AAAAATAAAGGGTAA 100 371
SH07_RS06480 1328365 .. 1328380 -  -3.2  -3.12999   GCAGCGGAGACTGAA              GCGCCGC AAT GCAG-GC              TTGCCGTGTTGTGAG  46 68
SH07_RS06475 1327020 .. 1327050 - -11.8  -2.60079   TGACCGTATAATTCA       CGCGATTACACCGC ATT GCGGTATCAACGCG       CCCTTAGCTCAGTTG  73 115
SH07_RS06465 1326167 .. 1326181 -  -4.4  -3.54743   TATGATCAATTATAA               TTAATA TTA TATTAA               TTCGTATAATTTGGC  52 17
SH07_RS06435 NONE
SH07_RS06430 1318956 .. 1318977 - -15.9  -3.95836   AGTCTGAAAAGAGAA           CCGGCCTGT TGAT ACAGGCCGG            GAAAGGGATCAGGCA 100 34
SH07_RS06425 1317859 .. 1317869 -  -6.8  -3.70446   CTACAGCGAAGAGAA                 CCTG AAG CAGG                 CGCGTGCGGCGCTGG  63 513
SH07_RS06415 NONE
SH07_RS06410 1315437 .. 1315447 -  -2.4  -4.08394   ACATGCGTCTTAAAA                 CTCC TGT GGTG                 CACAACTCTCGGCTT  55 121
        purE NONE
SH07_RS06400 1313749 .. 1313781 - -10.6  -2.57881   CAATTGGTGCACAAT      GCCTGATGCGATGC TTGAC GCATCTTATCAGGC      CTACAATGGGTACCG  74 96
SH07_RS06375 NONE
SH07_RS06370 NONE
SH07_RS06365 1305524 .. 1305543 - -13.6  -5.63504   AATGTTACAAAAAAA            GCCACGGT ATAA ACCGTGGC             AAAATCCAACATAGC 100 68
SH07_RS06315 1293575 .. 1293600 -  -4.7  -2.94412   GTGAACCTCAAATCA         GCTTGCGCGCTA TTT TA-CGCGCCAAC         GCGCAAGGAAACTTG  50 45
SH07_RS06310 1292367 .. 1292390 -  -2.4  -3.28712   TCTTGTTTTGGATAA          GGATTCGACA CTCA TATCAAAACC           GGTAACTCTCAACCT  45 92
SH07_RS06305 1291768 .. 1291783 -  -6.2  -4.67048   CTATCTGAAAATAAA              TAATCC TTCC GGATTA               AAATAAATTCTTGCC  77 212
SH07_RS06270 NONE
SH07_RS06265 NONE
SH07_RS06260 1279685 .. 1279716 - -10.9   -4.4846   CAATTGAAGAAGAAA      TGATGCGATGCCG GATGCG CAGCATCGCATCC       GGCGTTGTGGTTCAT 100 59
SH07_RS06245 NONE
SH07_RS06240 1276343 .. 1276361 -  -3.8   -4.7497   GCGATGTAGCAAAAA             TTACCGGC CTG ACCAGCAA             AGCCATTCGCTTCTA  73 390
        copA 1271022 .. 1271075 - -10.1  -2.57931   CGTAGGCCGGATAAG GCGTTTACGCCGCATCCGGCATCCG AGCA CCATTGCCTGATGCGACGCTTACGC GTCTTATCAGGCCTA  71 150
SH07_RS06210 1269449 .. 1269460 -  -7.2  -2.98014   AACGAAGCAAGCATA                CGCC TGAT GGCG                 GTCCAAAAAAAAGAG  61 176
SH07_RS06205 1268899 .. 1268922 - -16.8  -3.67976   GGCAGTAATCCGAAA          GTGCCGGATG TTTG CATCCGGCAC           AATGCTTAATCGCGG 100 31
SH07_RS06195 1265768 .. 1265794 - -15.3  -3.09831   GCGACTGTAAAACGA         TGCAGCCAAAG TTTGC CTTTGGCTGCA         ATGAAATCAGTCTTT 100 32
SH07_RS06190 1263782 .. 1263793 -  -7.2  -3.50393   TCGTAGGCCAGATAA                GGCG TTCA CGCC                 GCATCTGGCATTTGG  66 119
SH07_RS06180 1261271 .. 1261304 -  -9.7  -3.66995   GGGAAAAAATATGAA     TATATTCCGGCGC TTAATGCC ACGCCGGAACATA      TCGAAATGATGGCTA  77 60
SH07_RS06135 NONE
SH07_RS06130 NONE
SH07_RS06125 1252233 .. 1252253 - -12.6  -3.18505   GGGTAAAAACGAAAG            GGGGCAAC ATTTA GTTGCCCC            GAGATTGCTAACAAA  93 33
SH07_RS06110 NONE
SH07_RS06105 1243544 .. 1243559 - -11.8  -5.28176   GTTATGCATAAAAAA              GGCCGC TTAC GCGGCC               TTAGTGATTACACGT 100 45
SH07_RS06100 NONE
SH07_RS06095 1242267 .. 1242278 -  -2.2  -4.07568   TCCGGTTGCTGAAAA                TGCG GCAA CACA                 GTAAGACGAAAAGTC  53 162
SH07_RS06090 NONE
SH07_RS06085 NONE
SH07_RS06080 1238925 .. 1238941 -  -5.9   -3.1916   CAAAAAATCCCAACA              TGGCTAA ACT TTAACCA              CAACTGACGTCGCAA  55 476
SH07_RS06070 1238170 .. 1238194 -  -7.1  -3.83026   TGCCGGTACAGCAAA         CCGCCGTGCC GGTTCA GGC-CAGCGG          TGGCGCAACGACTAC  66 138
SH07_RS06060 1236594 .. 1236620 -  -9.5  -5.07053   AAGCACTGCAAAAAA        CAGCCGGACGGT TTTC ACC-TCCGGCTA         TTTTTTTAATTGTGA 100 31
SH07_RS06025 1227898 .. 1227912 -  -8.6  -4.89477   GCTTGAACAATAAAA               GCGTTA TGG TAACGC               CTGCGATTAACCCGG 100 50
SH07_RS06020 1226670 .. 1226692 - -10.7  -3.12351   TTTTGCCAGACTGAA           GAGGTCATA CCAGT TATGACCTC           TGTACTTATAACAAC  79 510
SH07_RS05965 NONE
        ampG 1214174 .. 1214194 -  -4.9  -4.90525   CAATGTGAAATAAAA            CAATTATTT AAC AAATAATTA            TCATTAGAGTGACAA  74 226
SH07_RS05955 NONE
SH07_RS05950 NONE
SH07_RS05945 NONE
SH07_RS05940 NONE
SH07_RS05935 1209106 .. 1209119 -  -8.1   -5.4756   AATGCTAAGAAAAAA               GGTGC CGTA GCACC                TTTTTAATAGAGAGG 100 46
SH07_RS05930 1207362 .. 1207385 -  -3.8  -3.97911   ATCAAAGACAGCAAA          CTGAAAGTGC AGGC GCAAATTCAG           GGCGATGAAATCCGC  58 267
SH07_RS05920 NONE
SH07_RS05915 1204968 .. 1204980 -  -6.3  -3.42069   TGAAGCGGAAGAAGA                GAAGT TCG ACTTC                AGCATTCTCGATAAA  58 421
SH07_RS05905 NONE
SH07_RS05900 NONE
SH07_RS05895 1200545 .. 1200555 -  -2.4  -3.08133   CACTTACTTATGTAA                 GCTC CTG GGGC                 TTCACTCGTTTGCCG  43 110
SH07_RS05890 1199011 .. 1199036 -  -8.3  -3.18681   TCGGAAGTGGATTAA         GCCCGATCGTTC CTG GGACGAT-GGGC         TCGCTGGCAGCGATT  63 475
SH07_RS05855 1194360 .. 1194371 -  -5.8  -4.08767   GCCACTGTTTGAAAA                TCCC TTGC GGGA                 GTGAAAAAGGCGCAA  68 291
SH07_RS05850 1193424 .. 1193444 - -12.6  -4.14257   GTTAACAATCAGAAA            TGCCGGGA ATAAA TCCCGGCA            TTTTCATAATCAGAA 100 35
SH07_RS05810 1186413 .. 1186439 -  -2.8  -4.63218   CGCTGCGTAAGAAAA         GTCAGGCGCTAC GTC ATGGCGGCTGTC         AGGTGCTGTATGCGG  68 248
SH07_RS05780 NONE
SH07_RS05775 1174829 .. 1174850 -  -3.7  -3.48684   TCACAACCACCAGAA           CGGCTAC CAATCACC GTAGCCA            ATAAAGTGATAGCTT  51 107
SH07_RS05770 1173382 .. 1173424 -  -5.5  -5.30189   CACAAGAGTAAAAAA CGTAGGCAATTGGCGCATCA TGCC TGATGCGACGCTTGCCG-CG TCTTATCAGGCCTAC  84 223
SH07_RS05760 1171390 .. 1171404 -  -7.1  -3.30124   TCGTACGCCGGATAA               GACGC GGCAG GCGTC               GCATCCGGCATTAAA  64 54
SH07_RS05720 1167111 .. 1167151 -  -9.9  -4.65182   TACAAAGCAAAGAAA GCCGGACGT-A-ACCG-CAC CGAA GTGGCGGCCTGACGTCCGGC GAAAGTCATCAGGAT 100 34
SH07_RS05690 1162121 .. 1162145 - -10.8  -4.42851   TGAAGAAACTGAAAA          CGCCCAATAA GAATA TTATCGGGCG          TTAAAATATTACATT 100 34
SH07_RS05680 1161353 .. 1161371 - -10.2  -2.78263   ACAATGTAAAACTTA             CTGGCGGC GAT GTCGCCAG             TGCAGCCATAGCGCC  75 4
SH07_RS05660 1157413 .. 1157441 - -10.4  -4.40298   ATCGAAATGAATAAA       GGCAAACTGGTCG CTAT CAACC-GTTTGCC        TTCAGAGTATTAATC 100 39
SH07_RS05645 NONE
SH07_RS05640 1153670 .. 1153691 -  -7.3   -3.4285   TCAGGCAATTTATAA           CGTTGCTGA AACG TCAGCAATG            TATGATGTTGCTACA  61 398
SH07_RS05630 1152092 .. 1152102 -  -6.8  -2.85668   GAGGGGCATAGTATA                 CCTG AAG CAGG                 GTAGGGATGTTTTAC  57 145
SH07_RS05625 1150977 .. 1150993 -  -6.5  -2.73875   GGCGGGGTAATACGA              GAGTGGA CGG TCCCCTC              GCCCCCTTGGGGAGA  55 110
SH07_RS05600 1146278 .. 1146288 -    -4  -3.91488   AATTTGCTCAAAGAA                 TCAT TTT ATGA                 ATTACAAAGCCTTCA  59 121
SH07_RS05595 1144802 .. 1144814 -  -4.1  -3.44051   GTTCGAGCATTATAA                CGAAT GGC ATCCG                CATAGTGCGCTGGGT  52 275
SH07_RS05580 NONE
SH07_RS05575 1142232 .. 1142282 - -16.6  -3.06302   ATCATCTGCATGCAA TATACTATAGGGGGGTATTCTAT ATGTCA AT-GCATACCCCCCTATAGTATA TAACACTGGAGAATA 100 137
SH07_RS05570 NONE
SH07_RS05565 1140751 .. 1140771 -  -7.5  -2.85407   GAGAGTATTAAGAAC            CCCCGCC TGAAGTG GACGGGG            TAAACCTGCGGGAAA  59 41
SH07_RS05560 1139826 .. 1139837 -  -7.2  -3.30124   GTGTAGGCCGGATAA                GGCG TTCA CGCC                 GCATCCGGCAGTCGT  64 48
SH07_RS05515 NONE
        lacI 1128723 .. 1128736 -  -6.7  -2.70932   TGGGGTGCCTAATGA               GTGAG CTAA CTCAC                ATTAATTGCGTTGCG  56 42
        lacZ 1125528 .. 1125548 - -14.7  -3.38046   TCCTTACGCGAAATA            CGGGCAGAC ATG GCCTGCCCG            GTTATTATTATTTTT 100 33
        lacY 1124221 .. 1124232 -  -7.2  -3.28791   ATGTTGGTCGGATAA                GGCG CTCG CGCC                 GCATCCGACATTGAT  64 44
        lacA NONE
SH07_RS05475 NONE
SH07_RS05440 1109148 .. 1109179 -  -9.4  -2.66451   ATCTATTGAAATTTA      TGCCGGATAAAGCG TTCG CGCTGCATTCGGCA       GTTCAGCTTTTCAGC  68 28
SH07_RS05430 1107843 .. 1107864 -  -7.2  -5.31059   AGACCAATGAAAAAA           GCCCACAC AGGGGA GAGTGGGC            TGAAATGGGAAGCTA  95 152
SH07_RS05375 NONE
SH07_RS05370 1095472 .. 1095485 -  -2.3  -3.78909   TAACGATAAAATCAA               GCTGG TTCT CGAGC                TAACGGAACGTAACC  51 459
SH07_RS05360 1093931 .. 1093956 -  -7.5   -4.4009   TGTTATTGCATAAAA         CCGCGCCATGT CTGC ATATGGCGCTG          TTTCTCCTACCTCTT  75 353
SH07_RS05350 NONE
SH07_RS05345 NONE
SH07_RS05340 1087803 .. 1087813 -  -5.4  -4.84914   ATCCAGAGAATAAAA                 TCTG TCG CAGA                 TAAGGTTGTATTAAT  75 207
SH07_RS05335 NONE
SH07_RS05330 NONE
SH07_RS05305 NONE
SH07_RS05300 NONE
SH07_RS05295 1079975 .. 1079998 -  -6.9  -4.56597   GTCTTGCTGTAAAAA          TACATGATT GATATT AATCATGTA           TTTTACCTAAGACGA  76 171
SH07_RS05290 1078856 .. 1078866 -  -3.2  -4.24123   GGAACAATTTGAAAA                 CAAG AAC CTCG                 CTTAGGCCTGTGTCC  58 27
SH07_RS05270 1075402 .. 1075416 -  -5.7  -3.29511   TGGATTTTTCGAGAA               TGGAG GTTAT CTCCA               CTTTACTGGCCGATA  57 168
SH07_RS05265 NONE
        rpmJ 1074708 .. 1074740 - -12.3  -4.26344   ATATCCCCAGGAAAA      TTAATGTTGGTGT TATAAAC ACACCAACATTAA      TCCGATCTGATTATT 100 77
SH07_RS05250 1073115 .. 1073127 -  -4.8  -2.53876   CCCGAGTTGAATTGA                GGAC GTGAT GTCC                CAGTGAGTCATTTTT  47 62
SH07_RS05245 1072467 .. 1072485 - -11.7  -4.24342   CCGTCCAGGAATAAA             GCAGGGG GGCTA CCCCTGC             TGGTACATCAGAGAG 100 42
SH07_RS05240 NONE
SH07_RS05235 NONE
SH07_RS05230 NONE
SH07_RS05225 1066635 .. 1066667 -  -4.8  -3.84619   AAATCGTAAAGAGAA      CAGCGGTACATCGT ATGTA AGAACGTACCGCGG      TTGGCTGGGGAACTT  59 271
SH07_RS05220 1066036 .. 1066066 - -12.8  -2.76189   TAATGCATTGAATGA       TAAAAATGGCGC AAATACA GCGCCATTTTTA       TAGGTTAAAAACATT  91 230
SH07_RS05210 NONE
SH07_RS05205 NONE
SH07_RS05200 NONE
SH07_RS05195 NONE
SH07_RS05190 1059623 .. 1059639 -  -9.5   -3.2045   AAAAATGCATTAACA              TCGCATT CGT AATGCGA              AGGTCGTAGGTTCGA  67 185
SH07_RS05180 NONE
SH07_RS05175 NONE
SH07_RS05170 1057325 .. 1057342 -  -7.1  -4.33854   ATCAATAAAATTAAA             TCTGTAA TTTA TTACAGA              CTTTCTCGTACAGAA  75 19
SH07_RS05165 NONE
SH07_RS05160 NONE
SH07_RS05155 1054707 .. 1054734 - -12.2  -4.40333   TTGAAACAATACAAA        TAA-GGCCTTCTC ACT GAGAAGGCCATTA        CCGACTTACAGTTCG 100 31
SH07_RS05145 NONE
SH07_RS05140 1051575 .. 1051587 -  -3.3  -2.83258   AACAGACTGAATAAT                CGGCA TAA TGCTG                GCATGTCCACGCTGG  43 157
SH07_RS05135 1050532 .. 1050554 -  -5.5  -3.41051   CCAGCTCGACCACAA          CGTGCCGTCG TGGC CG-CTGCACG           AGCAGCCCATTCCGG  54 293
SH07_RS05110 1043200 .. 1043216 -  -2.9  -2.59447   GGCGAATGAGAATAT              TTGCCTG CCG CCGACAA              TCAGGTGGTCGGGGA  41 56
SH07_RS05105 1042809 .. 1042822 -  -2.3  -2.76969   TAAGCCATTTTAAAT               GACTC GGAG GTGTC                TGTTAAACCCGTGGC  41 6
SH07_RS05100 NONE
SH07_RS05095 NONE
SH07_RS05090 NONE
SH07_RS05085 NONE
        fbpC 1040106 .. 1040139 -  -9.5  -3.30124   TTGTAGGCCTGATAA     GCGCAGCGCATCAGGC ATT GCCGGATG-GCGGCAC     AAGCGCCTTATCCGG  74 60
SH07_RS05065 1036018 .. 1036046 -  -3.9  -2.90462   AAAGCCAGAAAAGAT       CGGTGG-TACTG GAATAA CAGTATCCAACG        GGGCCGAAGTACGGC  46 498
SH07_RS05055 NONE
SH07_RS05050 1034307 .. 1034327 -  -4.6   -4.6856   CAAATACTGGAAAAA            CCGTCCTG AAAAG CCAGACGG            CAGACGGGCTGTATT  72 301
SH07_RS05030 1031407 .. 1031430 -  -7.4  -5.80727   AAAAATAATAAAAAA          CGGTAGAATC GTGA GATTCCGCCG           TTAATTGCGTATGTT 100 302
SH07_RS05025 1030462 .. 1030485 - -10.2  -2.91398   AACAAATAAAAGGGA          TCCCCGTCGC ATCG GCGACAGGGG           CAGGGAAGTAACAGG  76 55
SH07_RS05020 1029246 .. 1029261 -  -4.6  -4.25283   AGCCGCTCACGAAAA              TCACGC CGCA GCGTGC               GCACCGACACACCAA  66 366
SH07_RS05015 NONE
SH07_RS05010 NONE
SH07_RS05005 1027986 .. 1028011 - -12.5  -5.18371   CCTGATAAAAGAAAA         CCCCGGCAGCC TGCT AGCTGTCGGGG          TGAATTTGCTGGGGA 100 52
SH07_RS05000 1027648 .. 1027668 -  -9.7  -5.06414   CTCCGTCAATAAAAA            CGCCAGC GGCGATG GCTGGCG            TATGGGGATATAAAG 100 79
SH07_RS04995 NONE
SH07_RS04990 1026679 .. 1026694 -  -4.7   -3.6707   ATGTAATACCTCAAA              GCAGA CCGTGT TCTGC               GAACGAATAGATTTG  57 5
SH07_RS04985 NONE
SH07_RS04980 1025652 .. 1025684 - -12.1  -3.90048   TTGTCCGTAAAAAGA      TAACGCGCCTGCC GGGTAGT AGCAGGCGCATTA      CGCAATAGGTAAACA 100 87
SH07_RS04960 1021432 .. 1021456 - -10.7  -2.78679   CGGCGTGAGTGAAAT          GTGCCGGATGC ATC ACATCCGGCAA          TATTCATTAAAACTG  77 32
SH07_RS04940 1017409 .. 1017440 - -17.3  -3.86776   TAATGAAGGATGAAA      CTGCCGGAAGGCG ATTAAA CGCCATCCGGCAG       CAAATCAAATAATTA 100 38
SH07_RS04900 1011508 .. 1011519 -  -7.2  -3.37796   CGGTAGGACGGATAA                GGCG TTCA CGCC                 GCATCCGGCAGTTGT  64 58
SH07_RS04885 NONE
SH07_RS04880 1009031 .. 1009043 -  -3.3  -2.91429   TAAAACGGTTACACA                CGCCA GGA CGGCA                AAATGGATCCCAAAT  44 137
SH07_RS04875 1008227 .. 1008248 -  -8.7  -3.91084   TGACGGGCAATGAAA           CCTGGCAAA AGAT TATGCCAGG            CGAATGGCGCTTATT  74 36
        fadE 1004027 .. 1004044 - -12.7  -4.56367   TAGCGGATAAAGAAA             CGGAGCC TTTC GGCTCCG              TTATTCATTTACGCG 100 34
SH07_RS04850 1002338 .. 1002351 -  -3.8   -3.6869   CACAGCAATCCGAAA               CCAC TGGCAC GTGG                AGAATAAGCTGCACA  53 287
SH07_RS04840 1001918 .. 1001931 -  -2.4  -3.17194   ACTCTTTTAATTTAA               CATG TAAACG CATG                GTTAATCCTCATATC  43 34
SH07_RS04835 1001322 .. 1001352 - -10.6  -3.19657   ATCAATAATAAATTA      TATCTGCCGCCAG GAATTT CTGGCGGCA-ATA       ATACAAAATTCTTTG  77 124
SH07_RS04815  998684 ..  998711 -  -9.1  -2.55021   AAACAAGCCACGAAT        TCGCCAGGCGG TTGGAG CCACCCGGCAA         TGTCGTAAACCACAG  65 43
SH07_RS04805  997189 ..  997203 -  -4.2  -3.42996   GACGACCGATCATAA               CGGC GAACGGA GCCG               ATGACAAGAAAGTTT  52 43
        mltD  995752 ..  995772 -  -9.7  -5.72622   GGCATAAATAAAAAA            GGCACCG GGGGAAT CGGTGCC            TTTTTATTATCTGGT 100 44
SH07_RS04785  993096 ..  993125 -   -10  -5.47159   GCCGAAGATAAAAAA       GCGATCGCCGCA CTGGAT TGCAACGACCGC        CTGGTTAGCCCGGAA 100 61
        metN NONE
SH07_RS04735 NONE
        metQ  983249 ..  983272 - -14.6  -3.23975   AGCTTGTAAAAATGA          CAAGACGGGC AAGC GCCCGTCCTG           AATGATATTACAAAT 100 60
        rcsF NONE
SH07_RS04720  981999 ..  982017 -   -11  -3.42056   AGTTGGAAGGTAGAA             CAGGCTCA AGG CGAGCCTG             GGACAAAAAAAAGTG  83 89
SH07_RS04715  980221 ..  980241 - -13.3  -5.47821   ATCCATGTAAAAAAA            GGGCCCTGA AAT TCAGGACCC            TTTCTGGCATCAGCC 100 35
SH07_RS04710  979262 ..  979273 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG TTTA CGCC                 GCATCCGGCAATGGT  64 125
SH07_RS04690 NONE
SH07_RS04685  976830 ..  976862 -   -12  -3.76952   CTTAGTTAAGTGAAA      GCCGGATAAGACGC ATCAA ACGTCGCATCCGGC      GAAAGTCAATCAGGA 100 35
SH07_RS04580  951884 ..  951899 - -11.8  -5.15634   TATCGCATTAAAAAA              GCCGGC ATTC GCCGGC               TTCATCTTATTCGTC 100 32
SH07_RS04575 NONE
        dapD  948284 ..  948306 - -10.5  -5.40474   ATCCCTGCAAAAAAA           TCGGGCAGC GTCGT GCTGCCCGT           GTGCATACTTTTAGT 100 36
SH07_RS04565 NONE
SH07_RS04560  946575 ..  946598 -  -4.4  -3.35813   TGGCAGGCCAACGAA          CTGGCGCGACC GCT GG-CGCGGCTG          AAAACGATGGACAAT  51 330
SH07_RS04540 NONE
SH07_RS04535 NONE
SH07_RS04530  939996 ..  940010 -  -5.6  -4.68994   ATGACCATCGAAAAA               CAGGGC GTT GGCCTG               GTGGTTGATCCGATG  75 210
SH07_RS04515  936697 ..  936730 - -10.9  -2.60079   TTACGCGACAACGGA     TGCCCGATGCGACGC TGGC GCGTCTTATCGGGCC      TACAAACGGCCCCGA  76 91
SH07_RS04475 NONE
SH07_RS04470 NONE
        dksA  923296 ..  923314 - -11.7  -4.81306   TTGAACAAAAAATAA             GGCGGGA GCATT TCCCGCC             TGTGGTAAACGTGAT 100 54
SH07_RS04460 NONE
        pcnB NONE
SH07_RS04450  920258 ..  920282 - -10.3  -4.21141   TTTGAACAAATTAAA          TTTACTTAATT CAA AATTAAGTAAA          AATAAGTTCACAAGT  91 190
SH07_RS04445  919424 ..  919459 -  -6.4  -4.44548   TAGAGTTAATTAAAA    CAGGGAATAATA TAAAATAGAAAT TATTATTCCCTG     TATATTCATTCAATC  74 59
        ecpD NONE
SH07_RS04435 NONE
SH07_RS04430 NONE
SH07_RS04425 NONE
SH07_RS04420 NONE
SH07_RS04415  912863 ..  912912 -    -8  -2.70932   TGGTGGGGGCAATGA TTTAT-CCGTAGCAGCACTGCCA GAAGG TGACAGTGCTGCTACGTTATCAG GGATAGGTTACCTGG  60 22
        panB NONE
        panC  911103 ..  911133 -   -12  -3.51232   CGTGGGGTAAATTAA       TAACTGGCGCCA TCAGCCG TAGCGCCAGTTA       AGTATTACGCCAGCT  91 30
SH07_RS04395  909470 ..  909501 -  -5.1  -2.62263   ATTCGCTGGAGACGA      TGTC-GCGGCTGGT GAGTA ACCAGCCGCAGGGA      TAACAATCAAGCAAC  49 32
SH07_RS04370  904944 ..  904957 -  -2.4  -3.02511   TCGACTCGGGGAATA               CACT GTCGAA AGTG                CGTGAGATCTTAAGC  42 270
SH07_RS04360  901848 ..  901867 - -13.6  -3.36515   CCGTATTCGGAAATA            TGCCCGGA TCTC TCCGGGCA             TTAAACTGATGACAA 100 187
SH07_RS04350  899717 ..  899738 - -10.9  -3.17362   ACATAATAGCTAACA           TTGACCGCG GATG CACGGTCAA            TATTTCTACAAAAAG  79 51
SH07_RS04345 NONE
SH07_RS04340  897950 ..  897977 - -17.8  -4.59982   GCAGAAGTAAATAAA        TCTGGCGGAGCC TGGG AGCTCCGCCAGA         GCCGTTAAACAGCTG 100 30
SH07_RS04325  892566 ..  892582 -  -6.5  -5.26875   CCGGCAATTAAAAAA              GCGGC TAACCAC GCCGC              TTTTTTTACGTCTGC  89 44
SH07_RS04300  883336 ..  883364 - -10.2  -2.84325   TTGGTGTAAAGATTA        TTGCCCTCACCC TGTAC GGGTGAGGGCGT        AGAGAGATTAATGCG  75 33
SH07_RS04285  880911 ..  880930 -  -7.1  -2.64794   GGGAAGGGGAGATTA            TCCGCCC GCGATG GAGCGGA             TAAATCTGTCAACTA  52 41
SH07_RS04275 NONE
SH07_RS04270 NONE
SH07_RS04265  877466 ..  877478 -  -3.3  -3.72893   GAGTCTGCGATGAAA                CGTCA CGT TGGCG                GCGTTGCGGAATATC  53 263
        coaE NONE
SH07_RS04250 NONE
SH07_RS04245 NONE
SH07_RS04240  874448 ..  874465 -  -4.1  -4.62069   TCGCTATTTGAAAAA             CTGGAAT ATGA ATTCCCG              GACAGGCATATAACA  70 318
SH07_RS04115  846774 ..  846791 - -14.1  -5.60993   TCGGGCATAAAAAAA             CCCGCGC AATG GCGCGGG              TTTTTTGTTTGACTG 100 50
SH07_RS04110  845155 ..  845167 -  -3.3  -2.62515   AATTCTTCGACATCA                CACGG TTT CCTTG                TTGTTTTCGTTGTGT  42 10
SH07_RS04105 NONE
SH07_RS04100 NONE
        leuD  842015 ..  842034 -   -15  -3.64599   GGACGATAGCGGAAA            GCCCGGTC ATTT GACCGGGC             AAGGGGATTAATTCA 100 33
SH07_RS04080  838701 ..  838725 -  -7.2  -3.64192   AAAAAGAGTGGCAAA          GGACTTGAGA AGGAG CCTCAAATCC          CTTCGCCGGCGTTAT  68 138
        tbpA NONE
        thiP NONE
        thiQ  835371 ..  835397 -  -6.5   -4.3898   ATCAGGCCTACAAAA         CGCACTACCCG TAGGT CGGATAAGGCG         TTCACGCCGCATCCG  72 51
SH07_RS04050  831549 ..  831559 -  -2.4  -2.87132   TCGTGTCCTTATAGA                 GTCG CAA CGGC                 CTGGGCAGCCTGTGC  41 8
SH07_RS04045  829984 ..  829997 -  -8.1  -3.50393   GTGTAGGCCAGATAA               GACGC GTCA GCGTC                GCATCAGGCGTTACA  68 57
        araD  828995 ..  829015 -  -8.3  -5.19261   AAATCCATCAAAAAA            CCAGGCT TGAGTAT AGCCTGG            TTTCGTTTGATTGGC 100 59
SH07_RS04035  826631 ..  826647 -  -2.1  -3.63744   TTTTTGCTCAAAATA              GCCCAAG TTG CCCGGTC              ATAAGTGTAGCAAAA  49 1
SH07_RS04030 NONE
SH07_RS04025  822813 ..  822828 - -10.4  -5.72622   GGCAGAAACAAAAAA              TCCCCG GACT CGGGGA               TTTATGTACAAGAGG 100 78
SH07_RS04010  817917 ..  817927 -  -8.2  -3.35813   TTCCATTTCAATTAA                 CCGC ACT GCGG                 ATTACGTGGTAAATC  69 47
SH07_RS04005 NONE
        pdxA NONE
        ksgA NONE
        apaG NONE
        apaH  813131 ..  813144 -  -2.3   -4.4572   AACACCTTAAATAAA               CCCGT GATT ATGGG                CCGCCATACCTGGGA  63 455
SH07_RS03940 NONE
SH07_RS03935  802404 ..  802417 -  -8.1  -3.30124   CCGTAGGCCTGATAA               GACGC ATCA GCGTC                GCATCAGGCAGCGCA  66 46
SH07_RS03930 NONE
        caiC NONE
SH07_RS03920 NONE
SH07_RS03915  797754 ..  797767 -  -5.9  -2.68775   CGATGAGCAAATTTA               CGCGC GCCT GCGCA                ATAACAGTCGGGAAA  50 233
SH07_RS03905  797286 ..  797305 -  -7.8   -3.3449   ATCGAATAACTAATA            CGGTTCTC TGAT GAGGACCG             TTTTTTTTTGCCCAT  66 0
SH07_RS03890 NONE
SH07_RS03885  792383 ..  792396 -  -3.9  -3.65224   ACTTGATCTCAATAA               TTTGT AACC ACAAA                ATATTTGTTATGGTG  53 60
        rpsT  783965 ..  783978 -  -9.5  -5.64274   GCAGGCATAAAAAAA               CCCGC TTGC GCGGG                CTTTTTCACAAAGCT 100 56
SH07_RS03835  782855 ..  782869 -  -2.8  -2.72799   GGGGGAGATAGATTA               GTTGTA CAT TACCAC               GATTTTGACTCGGCT  41 161
SH07_RS03820  779775 ..  779801 -  -3.6  -5.34365   GGAGAATAACAAAAA         TGGTCATCTGGA GCT TACAGGTGGCCA         TTCGTGGGACAGTAT  80 169
SH07_RS03800 NONE
SH07_RS03795  773705 ..  773715 -    -4  -3.23975   ATTCCTCAAAAATCA                 TCAT CGA ATGA                 ATGGTGAAATAATTT  51 147
SH07_RS03790  773094 ..  773110 -  -9.4   -5.8187   TAGCGAATAAAAAAA              TCCCCC GAGCG GGGGGA              TCTCAAAACAATTAG 100 37
SH07_RS03775 NONE
SH07_RS03770  768734 ..  768753 -  -7.8  -4.13654   CCGCTAAATGACAAA            TGCCGGGT AACA ATCCGGCA             TTCAGCGCCTGATGC  76 150
SH07_RS03725  761084 ..  761113 - -13.7  -4.64144   AATAAGGTTGAAAAA       TAAAAACGGCGCT AAAA AGCGCCGTTTTTT        TTGACGGTGGTAAAG 100 45
SH07_RS03700  755899 ..  755911 -  -4.7  -3.80573   TGGATTATCAGGAAA                GCCTG TGG CTGGC                GTCTGGCTGGGTCGT  58 98
        yjjX  754259 ..  754283 - -15.7  -2.65298   TTTAGCGAGTACAAC          CGGGGGAGGCA TTT TGCTTCCCCCG          CTAACAATGGCGACA 100 518
SH07_RS03675  750193 ..  750214 -  -2.9  -5.03145   CAAGGTTTGAAAAAA           CCTGCACGGG TGA CCCGC-CACG           AAATTGAGGATGCTA  77 209
SH07_RS03650 NONE
        lplA  744623 ..  744644 - -10.1  -4.25401   CAAATCGAAGAGAAA           GTTGCCCGC ATGG GCGGGTAAC            TACCTTACAGCCCCC  93 25
SH07_RS03610 NONE
SH07_RS03605  735814 ..  735868 - -13.8  -2.57931   CGTAGGCCGGATAAG GCGTTCA-CGCCGCATCCGGCAGTTG GCGCA CAA-TGCCTGATGCGACGCTTAACGC GTCTTATCATGCCTA  95 380
        rsmC  728172 ..  728183 -  -7.2  -3.30124   TTGTAGGTCGGATAA                GGCG TTCA CGCC                 GCATCCGACACGGTA  64 54
SH07_RS03555 NONE
SH07_RS03550 NONE
SH07_RS03545  727292 ..  727306 -  -5.8  -3.53224   TATCTGGCTTGCAAA               TGATAA AAA TTATCA               TATGATATTGGTTAT  59 341
SH07_RS03535  726151 ..  726169 -  -5.9  -3.98282   GGTACATTAACCAAA             GCCGGAC GTTAA GCCCGAC             GGAGAGAGAAATATT  66 274
SH07_RS03520 NONE
SH07_RS03515  723115 ..  723150 - -13.4  -3.26947   TAACTTTTATAGTAA    CACACGGAGGAGAG GAGGCTGT CTCTCATCCGTGTG     CTTAAGCGAGGCAAT 100 42
SH07_RS03510 NONE
SH07_RS03505  721765 ..  721777 -  -3.3  -2.78384   TTGTGTCGCAGTATA                CCGCC AGA AACGG                GGATTAATACTCTTT  43 29
SH07_RS03500  721222 ..  721235 -  -5.2  -4.28254   GGGTAACAGCTAAAA               CGCG GCGTTT CGCG                GTTCAGGAAATGAAG  68 28
SH07_RS03495  718649 ..  718683 - -15.8  -3.33261   TTGTAAGCCGTAGAA     GGCGTGTAGGTCGCAC CCT ATGCGACCTACACATC     AGTCAGGAATTACCC 100 35
SH07_RS03485  716407 ..  716421 -  -5.6  -3.14468   TGTGAGCATAGGTAA               GCGGGA ATT TCCCGG               TATTTATCTTTTGAT  55 84
SH07_RS03480  714868 ..  714895 - -12.2   -4.2679   TAATCGCCATGAAAA        TGCCCGATAAGCA AAA TG-TTATCGGGCA        TAAGGAGATTAATCT 100 34
SH07_RS03470 NONE
SH07_RS03465  710645 ..  710662 - -14.1  -4.51812   TCTGATAAGAACAAA             GCCCCGC CGAA GCGGGGC              TAAACACGGTTAGTG 100 35
SH07_RS03460 NONE
SH07_RS03455  709414 ..  709442 - -14.5  -2.86124   TTGAGTGAAATATCA        GGCCGGATGCGGC TGC GCCTTATCCGGCC        CATAACCCCTTACTT 100 35
SH07_RS03440  706757 ..  706783 -  -7.4   -5.0538   CTTTATCGTAAAAAA        TG-CCCTCTTG GGTTAT CAAGAGGGTCA         TTATATTTCGCGGAA  89 65
SH07_RS03435  702690 ..  702712 -  -9.1  -2.89569   TCCGTAAATTAAGCA           GCGGCCCAA ATTCA TCGAGCCGC           AGAAGAAGAAATTGC  67 181
SH07_RS03430 NONE
SH07_RS03425  699655 ..  699673 - -11.7  -5.38549   GTGAAATAATAAAAA             GCGCACC GGAAA GGTGCGC             CAGAAAATAATGTTC 100 39
SH07_RS03420  699018 ..  699035 -  -2.8  -3.57185   CGTACTGAAACAATA             GATTTT TACTGC AAAATC              AGACTGGTAAATATT  48 108
SH07_RS03415 NONE
SH07_RS03410  696288 ..  696301 -  -2.4  -3.07816   TGGTCAGGTATTGAA               GATC CGCTTC GATC                AGGGGATGGGCTACT  42 255
SH07_RS03390  689758 ..  689768 -  -8.2  -3.00585   CATGAGAGGAAATCA                 GGCG CTT CGCC                 GCTATTTCGAATTTA  65 38
SH07_RS03380 NONE
SH07_RS03375 NONE
SH07_RS03370 NONE
SH07_RS03365 NONE
SH07_RS03360  683243 ..  683257 -  -3.6  -3.75153   TCCCTTTAAGGCAAA               TCAATA AGA TATCGA               GAAGTATACGTAGCG  56 55
SH07_RS03355 NONE
SH07_RS03350  681110 ..  681123 -  -2.4  -3.75629   GAGTGGTAAGGGAAA               CTTC CCTCAT GAAG                TGACCACTTGTAGCT  51 18
SH07_RS03340 NONE
SH07_RS03335 NONE
SH07_RS03330  677970 ..  677989 -  -2.9  -2.57132   CGGGCGGCTGACAAC            CGTTTAA GCCGTT TCAAACG             TTCCTTTCACGCAGG  41 9
SH07_RS03325  676613 ..  676631 -  -3.8  -4.10161   CAGGAGTGCGCAAAA             TGATGCGA CAA TCACTTCA             GGCTGTTTTACCTGA  60 391
SH07_RS03310 NONE
SH07_RS03305  674982 ..  675006 -  -8.6   -3.8512   GACTTATTATAATAA          GCGCAAGG GTAAACGTT CCTTGCGC          TTTCTTAAATTAAGA  75 128
SH07_RS03295  673695 ..  673722 -  -5.4  -4.11216   TCTGCACCTGCAAAA        CGGCGGCAGCTG GCGT CACCTGGCGCTG         GGCGTGGCTGGCTGG  65 305
SH07_RS03275  669415 ..  669428 -  -8.1  -3.50393   TTGTAGGCCAGATAA               GACGC GTCA GCGTC                GCATCTGGCATAAAC  68 169
SH07_RS03215  658914 ..  658926 -  -2.7  -4.56597   GGTGGTCTTCAAAAA                CTAAA GAT CTTAG                TTTAACTATTTGTTT  61 243
SH07_RS03205 NONE
SH07_RS03200  656475 ..  656494 - -12.1  -2.69246   GACAAATTGATAGCA            GGGCCCC TTTACC GGGGCCC             TGAAGCGTTAGTTTT  83 33
SH07_RS03195  655246 ..  655274 -  -3.8  -4.32482   AGCCATAATCGAAAA       GGCGCGGATGTCT ATTA AGGCATCCG-GCT        AATCTGTAAGCAATA  63 208
SH07_RS03180  652892 ..  652902 -    -4  -3.89346   TCCTGACGGGATAAA                 TTCA TAC TGAA                 GAACCTATTTAATCA  57 510
SH07_RS03175 NONE
SH07_RS03170 NONE
SH07_RS03165  651266 ..  651286 -  -6.8   -3.5511   TTCCAGCCAGAAATA            CCGGGAAC CTGTT GTTACCGG            GCGATGAGTGCGAAC  63 19
SH07_RS03160 NONE
SH07_RS03155 NONE
SH07_RS03150 NONE
SH07_RS03145 NONE
SH07_RS03140 NONE
SH07_RS03135 NONE
SH07_RS03130  644703 ..  644716 -  -2.4   -3.6878   ACATAGTGGAAAATA               TGCT TTGTTC AGCA                TGCTGAACCGTAATG  49 258
SH07_RS03125 NONE
SH07_RS03120  642937 ..  642950 -  -2.4  -3.09749   TATTGCGAACAGACA               TGAG TTTCTC CTCA                GACTGGTAAAATGCC  43 23
SH07_RS03115  640881 ..  640892 -  -5.8  -3.21276   CGTCCTCTCATAACA                GGGT AGCG ACCC                 ATCATTATCCGACTG  55 103
SH07_RS03110 NONE
SH07_RS03105 NONE
SH07_RS03100  638145 ..  638168 - -13.2  -2.67129   CTAATCAATAAAATC          CTGCCCCATA TCTA CATGGGGCAG           TTGTTCATTCTTTTA  91 38
SH07_RS03085  637143 ..  637164 -  -4.5  -3.44051   TGGTTATCATTACAA           TTGGAAATA AAAT TGTTTCCAA            TAGACATTTTTAACA  55 150
SH07_RS03080  636553 ..  636565 -  -4.1   -4.1673   GAATCGGTTAACAAA                GGATT CAT AACCC                ATACTCCAGACGGAA  61 17
SH07_RS03075 NONE
SH07_RS03070  633171 ..  633186 - -11.8  -4.19258   ACATTCCAGCTAAAA              GCCCGG CAAG CCGGGC               GTTAACACATCAGAA 100 35
        fecB NONE
        fecC NONE
        fecD NONE
SH07_RS03050  629452 ..  629470 -  -7.4  -4.10657   TCAGAGTCCGGAAAA             GTTCAGCC CCA GTCTGAAC             AGGCTTGCTGGCGCC  73 88
SH07_RS03035 NONE
SH07_RS03030  626001 ..  626019 -  -8.9  -3.05844   TTGGCCACCTGAACA             GAGGTGA TATGC TCACCTC             AGAACAACACAGGTG  62 315
SH07_RS03015  624998 ..  625026 -  -3.1  -3.90586   ATATGACCTCAGAAA        TGGATGGCGCTAT AGC ATATGGTCATCCA        GGAAAAAAAACACCA  55 468
SH07_RS03000  620741 ..  620758 -  -5.5  -2.96598   CAATTAAGGGACATA             GCCAGAT ACGC AACTGGC              TGATGCAAGCAGTCT  52 213
SH07_RS22855  618407 ..  618426 -  -7.2   -3.4072   TACTTTTCAGTACAA            GC-GACTGT ATT ACAGTCTGC            CATATATGATTACCT  66 119
SH07_RS02960  616787 ..  616806 -   -15  -2.89607   TTAAAACAGTAATCA            TCCCGGGC AAAT GCCCGGGA             ATTATTCTAGGATTA 100 288
SH07_RS02945  613997 ..  614010 -  -3.8  -3.57883   AGAATATGTGCGAAA               GAGG GCAGCG CCTC                AGATCAGCGCTGCGA  53 48
SH07_RS02935 NONE
SH07_RS02930  611398 ..  611415 - -12.7   -4.3898   ATTAGTGCCAGAAAA             GCAGCGC TTTC GCGCTGC              ACGTAGGGGGGCTGT 100 40
SH07_RS02925  609986 ..  610005 -  -4.2  -2.57931   GTGATTGCGCATAAC            TTCTCCCA ACGT CGGGGGAA             TCTTCAATCTTCCCC  45 69
SH07_RS02920  608911 ..  608938 -  -4.2  -2.80816   GGTTCACTCATGAGA        TATCCTCCAG TTTCCTGC CTGGAGTATA         GGCAACGTCCGGCAA  46 71
SH07_RS02915  607257 ..  607280 -   -14  -3.46482   AACCGAATGAACGAA          TAAAGGGAGC GAAA GCTCCCTTTA           TTATTGTTAGCAAAG 100 149
SH07_RS02900  603239 ..  603250 -  -7.2  -3.30124   GTGTAGGTCGGATAA                GGCG TTCA CGCC                 GCATCCGGCAATAAC  64 58
SH07_RS02895 NONE
SH07_RS02890  599781 ..  599800 -   -15  -5.47431   GTAAGAGATAAAAAA            GGCCGGAG CATG CTCCGGCC             TTCGTTTTCATCACT 100 50
SH07_RS02880  597482 ..  597500 -  -7.4  -2.74322   TTGAAGCGTTTAAAC             TCGGTTAC GAA GTGACCGA             TCCAGAAGAGCTGGA  57 402
SH07_RS02870  596102 ..  596134 -  -6.3  -2.50387   CTGCATAAAATAATG      TGATGCCGGGA TGGTTTGTATT TCCCGGCATCT      TTATAGCGATAGCAA  53 41
SH07_RS02850  592138 ..  592163 -  -8.3  -4.93877   CGTGAGTAAACAAAA         CCCAGACATCA TGGA TAATGGCTGGG          CTTAATTGAGCGTAG 100 45
SH07_RS02845 NONE
SH07_RS02835 NONE
SH07_RS02830 NONE
SH07_RS02825  589785 ..  589810 - -10.5  -4.61231   TTACAGCGGTAAAAA         GTCTGGCTC ATTATAGG GAGCCAGAC          TTTTATTACCAACCG 100 44
SH07_RS02820  589338 ..  589357 - -10.7  -3.14468   TGTCATCAGACTTAA            TCCGGGC ATGATA GCCCGGA             TTTCCATCAAGATTA  79 38
        treR  585089 ..  585102 -  -8.1  -4.92239   GGAAAAATTTAAAAA               CGGGA ACGT TCCCG                AAACGCAGCGAAGAT  95 65
SH07_RS02805 NONE
SH07_RS02800  581859 ..  581884 -  -9.8  -4.61868   TACTGACAGACAAAA         CCCCGG-AATG ACCGG CATTACCGGGG         CTTAGGGAAGATTTA 100 38
SH07_RS02795  579311 ..  579342 - -12.2  -2.65279   CAATTGCCAAATGTA      GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA       TTTGCTTAGCTCAGA  83 48
SH07_RS02790  578435 ..  578448 -  -5.2  -4.58685   AAAGTGGTCGAAAAA               GCCG ATAACG CGGC                GCAAGTCAAAGACGC  75 320
SH07_RS02775  576073 ..  576108 -  -8.3  -2.79796   CGGCATTTGAGCATA    GTGCCTGATGCGACGC TTGAT GCGTCTTATCAGGC-C    TACAGGTGCACCGTA  64 74
SH07_RS02765  573425 ..  573446 - -15.9   -5.1356   GCGCAGCAATAAAAA           CGCCTCTCC GTGT GGAGAGGCG            CAGGAGATTACGCGT 100 33
SH07_RS02740  567607 ..  567619 -  -7.7  -3.15579   GCAAGCGGCCATGAA                CAGCA AGG TGCTG                GTCGACCTGCGCTTG  61 371
SH07_RS02705  560210 ..  560223 -  -5.3  -4.13014   GCCAGAGGGTTAAAA               TTCAG ACAG CTGAA                AAATGCAAAACTGCC  65 183
SH07_RS02700  558676 ..  558700 - -14.3  -3.73647   GCTATGCAGTAATAA          GACGGCTCCTG ATT CAGGAGCCGTT          GATGTTTCTGGGGGT 100 40
SH07_RS02690  557489 ..  557519 -    -7  -3.16743   AACTCAGAGACTTAA       TTCCCCTATC CCATAGATAAC GATAGGGGAA       AATTATTTTTGCAGA  59 57
        cpdB  553393 ..  553406 -  -6.7  -3.30124   TTGTAGGGCGGATAA               GATGC GCCA GCATC                GCATCCGCCAATAAA  61 84
SH07_RS02665  551949 ..  551992 -  -2.4  -2.73334   AGGAAGCAGACATGA TTGCTCCCGGCATCCCGTC ATTATCA GAGAGGATGC-GGGAGGAT GCCACTTTAATTAAC  40 40
SH07_RS02660  550855 ..  550873 -  -4.6  -3.83318   TTCTTAATAAGATAA             GATGTATT TTA AATGCATC             TTTAAGGCAAAAGCT  59 86
SH07_RS02655  549691 ..  549701 -  -6.8  -3.14132   GGTCTGGCGCAGGAA                 GGTG TGG CACC                 GAAAGCGTTCGCTAA  57 488
SH07_RS02640  546524 ..  546537 -  -3.7  -2.71731   TGTATTCGTTAATCA               GCAGG TTAG CCAGC                CACAAAAAGCCATTG  44 410
SH07_RS02630  545426 ..  545444 -   -16  -4.72333   AACGAGACGTAAAAA             CGCCGACC ATT GGTCGGCG             TTTTGCTTTCTATTT 100 52
SH07_RS02600  543301 ..  543318 - -12.7  -5.75342   GTTTTTCAAAAAAAA             GCCCCCT GCGA AGGGGGC              AAAGCAAACTATGGC 100 66
SH07_RS02565  537354 ..  537395 - -10.9  -3.47762   AATAGCCAGGAAATA CTACGCCGGATAGCGCGAA CTTC TCCACGCTACCCGGTATAA  ACGACAGATTACAGG  83 34
SH07_RS02560  536297 ..  536329 -  -2.1  -3.45087   ATGAATTCAATAACA     TTGTCGC--GCCACT GGCAG AGTGGGAAGCGACAA     ACCACCTGGAACAAC  47 237
SH07_RS02550  535236 ..  535247 -  -2.2  -2.82327   TGTGCACAGGTAAAC                GCAT AGGG ACGC                 AAAGCAATGTAAAGC  41 62
SH07_RS02545  534814 ..  534825 -  -7.2  -3.30124   TTGTAGGCCGGACAA                GGCG CTCG CGCC                 GCATCCGGCATTGTT  64 60
SH07_RS02435  511290 ..  511303 -  -6.7  -4.28049   TCCAAAATTTGAAAA               GTGCT GCAA AGCAC                AGACCACCCAAGCGG  74 493
SH07_RS02410 NONE
         psd NONE
SH07_RS02400  504775 ..  504801 -    -3  -5.40072   TTGTGGCGAAAAAAA        CGCGGCTGG TTTATGTACG CCA-CCGCG         CTGGCTATTTTCGGC  85 114
SH07_RS02375 NONE
SH07_RS02370 NONE
SH07_RS02365 NONE
SH07_RS02360  497810 ..  497830 - -19.7  -4.52589   GGTTTCCATACAAAA            CGGCCCGCC ATA GGCGGGCCG            GATTTACATTGGCGA 100 45
SH07_RS02355  496626 ..  496643 - -11.3  -4.46581   GAAAAGCGGAGAAAA             GGTCCGA AAAT TCGGACC              CGATGGAATTTTACT 100 36
SH07_RS02350  495550 ..  495573 -   -11  -3.90559   AGCAATAAGCAATAA          CGGTACGACA GCTG TGTCGTGCCG           TTTGTTTTTTCTGCG  88 484
SH07_RS02325  493290 ..  493307 -  -5.7  -3.38314   TGCAACGGGCAAAGA             TTAAACT TCCC AGTTTAA              TGACAGGTTGCTGTA  57 190
SH07_RS02320  492102 ..  492146 -  -8.6  -3.31322   TTGAATGCTTGAGAA TTTGT-AGGCCGGATAAGGCG TTTA CGCCGCATCCGGCATGACCAA CGATCACGTTATCAG  69 87
SH07_RS02300  487668 ..  487690 -  -5.6  -3.62046   CCAGGGCTTTAAGAA           TTTCGTGCTG ATG CAGCAAAAAA           TGGCGGCGGGTGAAA  58 334
        aspA  485688 ..  485707 - -13.6  -5.55769   GCTCACAAGAAAAAA            GGCACGTC ATCT GACGTGCC             TTTTTTATTTGTACT 100 52
SH07_RS02285  484286 ..  484305 - -16.4  -4.55295   TCGGCGAGAAAGAAA            GCGGGGCG TGAA CGCCCCGC             GATTGATCATTACAG 100 35
SH07_RS02280 NONE
        dipZ NONE
SH07_RS02270  481589 ..  481600 -  -3.6  -2.53876   TGTCAGGTCAATGCA                CCAC CCTG GCGG                 CAGCGGGCGAAGCGC  44 1
SH07_RS02265  481362 ..  481381 - -13.6  -4.98531   TCCTGAAACGAAAAA            CGGACCTC CGTG GAGGTCCG             TTTATATGAATTTGG 100 38
SH07_RS02260  479142 ..  479168 -  -5.1  -5.10461   TTTATGTAATAAAAA         TTATGCGGCAA ATAAA TTGCCGCAACA         TATTATACCAACAGG  81 96
        cadB  477483 ..  477522 -  -2.7  -5.08824   TCTCCAGGTAAAAAA  GGCCCCTCCCAACACAT GGGACA AAATGAAAGGAGGAGCC   TCGGAAAATACTTTT  73 43
SH07_RS02250  475278 ..  475299 - -14.5   -5.1861   CTTATGAGCAAAAAA           GGGAAGTGG CAAG CCACTTCCC            TTGTACGAGCTAATT 100 39
SH07_RS02245  473704 ..  473715 -  -4.4  -4.25016   ATCACTAATAAATAA                CCAT CAAA ATGG                 TTTAAATGACTTATT  63 107
        lysS  471999 ..  472030 - -20.4  -2.71364   GGATTTGCGGAACGA      TGAACGAAGCAGTC GCCT GACTGCTTCGTTCA       TTAAAGTGAAATTTA 100 38
SH07_RS02215 NONE
SH07_RS02210  467946 ..  467956 -  -3.2  -3.90048   TTGTGGGTAAAAATA                 CACA TAA TGCG                 GGTGACATAATAGTT  53 227
SH07_RS02200  466208 ..  466239 -  -8.7  -4.13767   TTTGTTATTCGAAAA      TGGCGTGCCGC GTAGTCACGG GCGGCACGCAA       AGTGCATTTATAAGA  83 33
SH07_RS02195  464470 ..  464495 -  -3.9  -3.70689   TACAATCGCAAAAGA         GGTGGCCAGGGG GAT CACCTGG-CAGC         ATGCTGCCAGGCGCT  53 53
SH07_RS02190  463656 ..  463684 -  -6.1  -4.45151   AATAGCTAACGAAAA        TGGCCTGAT GCGATATGTTT ATCAGGCCA        CGTCTTAATGTAATG  74 113
SH07_RS02170  459446 ..  459457 -    -3  -4.58685   AAAGCGCGTGAAAAA                CAAA CATT TTTG                 AAATATTTAGTTTTA  65 131
SH07_RS02165  456961 ..  456979 -  -8.8  -5.85178   AACAGGCAAAAAAAA             GCGCGG GGTGGGG CCGCGC             AAAAAGTATGACATT 100 143
SH07_RS02160  455882 ..  455892 -  -3.2  -4.07968   GAAGACATAATTAAA                 CTCC TGC GAAG                 GCGAGCTTCGTGACA  58 144
SH07_RS02155  454481 ..  454514 -  -9.7  -4.54727   GCTCGCAAAGCAAAA     TTAAGCCAACCTTAA GTTC TTAAGGTTGGCTTTT      ATGTTTGCTGGATTA 100 48
SH07_RS02150  452784 ..  452795 -    -3  -2.93073   CGTCTTCAACAATCA                GAAT TTTC ATTC                 ACTCACTCTCCTGCA  44 20
SH07_RS02145 NONE
SH07_RS02140  450859 ..  450889 - -12.6  -2.66593   ATAAGCTGAAACGGA       TGGCCTGATGTGAC GCT GTCTTATCAGGCCA       ATTGAACTCTTAAGG  88 160
SH07_RS02115  445160 ..  445214 -   -14  -3.21924   GTAGGCCTGATAAGA CGCGCAAGCGTCGCATCAGGCATCTG GCA CCGTTGCCGGATGCGGCGCGAGCGCC TTATCCGGCTTACCG 100 53
SH07_RS02110  444114 ..  444137 -  -4.5  -2.80994   GGGAATTCGATGACA          GTGCGGGAGG GCGGG CCTCCCGG-C          GGGTTATTGCGTTGG  49 29
SH07_RS02105 NONE
SH07_RS02100  442102 ..  442113 -  -5.8  -3.30124   CTGTAGGCCGGATAA                GGTG CTTG CACC                 GCATCCGGCATCAAC  57 91
SH07_RS02095 NONE
SH07_RS02090 NONE
SH07_RS02085 NONE
        phnH NONE
SH07_RS02075 NONE
SH07_RS02070 NONE
        phnK  436822 ..  436833 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG TTTA CGCC                 GCATCCGGCACCGGC  64 41
SH07_RS02060  436068 ..  436082 -    -7  -2.52529   GATAATCATGAAGAG               GCTCCC ATT GGGTGC               AGGCGGTCGGCGACG  55 1
SH07_RS02055 NONE
SH07_RS02050 NONE
SH07_RS02045 NONE
        phnP  433094 ..  433120 -  -2.2  -4.45083   GGGAGAGGGAGAAAA         CGAGCGCAATAT TCA ATATCGAGCACA         ATCGGTCCCCTCGCC  60 92
SH07_RS02025  430917 ..  430932 -  -6.8  -3.13475   TAAGGGGACAGGTAA              CTCCGC GATG GCGGAA               TTACCTTTTTCTTAT  59 37
SH07_RS02020  429810 ..  429824 -  -8.6  -2.91264   CCCGCCATCGATATA               TATGGC GTG GCCATA               AATAACCTCTCTGCA  65 151
SH07_RS02015 NONE
SH07_RS02010 NONE
SH07_RS02005 NONE
SH07_RS02000 NONE
SH07_RS01995  423416 ..  423447 - -10.9  -4.65933   TATTTTTAAAATAAA      TACTTTTGGGGGC TTCAGC GCCCCCAAAAGCG       AGTGACATTAATTTG 100 33
SH07_RS01990 NONE
SH07_RS01985 NONE
SH07_RS01980 NONE
SH07_RS01975  418375 ..  418400 - -11.9  -4.10552   CGTGACGAAACGAAA         TACCGCGTGAC AGCC ATCACGCGGCA          GACATTTTATTTTTT 100 32
SH07_RS01970  417781 ..  417804 -    -6  -2.53581   CAGACCTGCAACCGA          TGGGC-CGTGT CAG ACACGAGCGCA          GCAGTCAACGTTATT  52 11
SH07_RS01965  416028 ..  416047 - -13.6  -5.66684   GAATGGATAAAAAAA            CAGCCTCC GAAA GGAGGCTG             TAGAAAGGACGGTAT 100 40
SH07_RS01960  415101 ..  415130 - -12.9  -3.30124   TTGTAGGTCGGATAA       GGCGTTTATGCCG CATC CGACATCAACGCC        TGATGCGACGCTTAA 100 174
SH07_RS01915  404297 ..  404328 -   -13  -2.60392   CATCCGGCAATCAAT      GCCTGATGCGACGC TGTC GCGTCTTATCAGGC       CTACAAACCGTTACC  91 64
SH07_RS01910 NONE
        actP  402174 ..  402197 - -16.8  -2.79321   GGGAGAGGAAGAGTA          TTCCCCGGTC AGAC GACCGGGGAA           GGGGAGAGATTAATG 100 35
SH07_RS01900  400603 ..  400661 - -15.5  -2.76456   AAAGCGACGTAACCA GGCCCGAGGTAATCTGAAAAAGGTGCAA TCTT TTGCACCTTTAACAGGTTAGCTCGGG-C TAACATTCATGATTC 100 101
SH07_RS01880  395979 ..  396008 - -12.9  -3.19389   CAATGGATGGAGCAA       TTACCCGCGCG GGAGTTAA CGCGCGGGCAA        TAAAATTACAGGCGG  95 31
SH07_RS01870  393685 ..  393707 - -13.5  -5.28176   GCCAGCCATAAAAAA           GAAGCCTCC GTTAT GGAGGCTTC           TACGTATCAGGTCAA 100 32
SH07_RS01860  389977 ..  389995 - -12.4  -4.55128   ACTCTGAAAGGAAAA             GGCCGCTC AGA AAGCGGCC             TTAACGATTACAGCA 100 33
SH07_RS01840  387271 ..  387294 - -14.6  -3.79668   ATGTAATGCAGGAAA          GCAGGCTGGA GCTA CCCAGCCTGC           AGTGAAATTAAACTG 100 214
SH07_RS01820  382173 ..  382193 - -12.6  -5.00267   AACTATAAAAAGAAA            GGGCTTCC CAGGT GGAAGCCC            TATTTCTTTTATGGA 100 34
SH07_RS01795  378148 ..  378167 -  -4.3  -4.77567   ACGTTCAGAAGAAAA            GTGAACG TACTCT CATTCAC             AACCTAACGATGAGG  71 300
SH07_RS01770  372855 ..  372872 - -11.3   -5.1101   TGATGATGTAAAAAA             GCCGGAT GATC ATCCGGC              TTTCTTCTGGGTTGC 100 150
SH07_RS01730 NONE
        malE  364086 ..  364119 -  -9.5  -2.88118   TTATCCGACAACAAC     TGCCTGATGCGACGC TGAC GCGTCTTATCAGGCC      TACATACGTTTCGGT  70 89
        malF NONE
        malG  361492 ..  361509 - -12.7  -5.99154   GACGAAAGAAAAAAA             GGCGCTC CGTG GAGCGCC              GAATAACAGTCACAA 100 96
        xylE  359693 ..  359725 - -11.4  -4.73388   AAGCGGGAGTAAAAA     GT-CAGCACGCCG AAATGGCG CGGCGTGCTGGAC      AGGAAGATTACAGCG 100 33
SH07_RS01695  358696 ..  358723 -  -8.5   -3.6215   CTAAGTCATGGGAAA        GGTGCCAGT TTTCGCACTC ACTGGCACC         TTCATTCTTAATGGC  73 33
SH07_RS01670 NONE
SH07_RS01665  353611 ..  353659 -   -13  -3.30243   ATGTAGGCCGGATAA GGCGTTCACGCCGCATCCGGCA ACCGA TGCCTGATGCGACGCGGTCGCG TCTTATCAGGCCTAC 100 73
SH07_RS01655  350025 ..  350054 -  -7.2  -3.85542   TGACAAGAAAATCAA       TACGGCCCGAAA TATAGC TTCCAGGCCATA        CAGTATTTACTCAAA  70 32
SH07_RS01650  349338 ..  349358 -  -4.5  -4.61527   AAAACGGCGGAAAAA            GGCGGTCGC CCG GCGTCCAAC            GGTAAGCGTTTTACC  72 203
SH07_RS01640  347603 ..  347623 - -11.2  -3.45742   GCACTATGAACAAGA            TGCCGGAT CATGC ATCCGGCA            ATTCACTTAAAAACG  83 32
SH07_RS01625  340725 ..  340735 -  -2.6  -2.80079   AACAGTGAAAAAATT                 TAAT ATG ATTA                 CAACTAAAGAAATAT  42 271
SH07_RS01620  337974 ..  337989 -  -6.8  -5.07053   AAGCAGCGGAAAAAA              TCACCG ATCT CGGCGA               ACAAATTGTGATTCG  90 514
SH07_RS01595  331350 ..  331370 - -10.4  -5.05228   ATCAAATTAGAAAAA           CCCCGGTCC ATAA GG-CCGGGG            TTTTTTGCATATCAA 100 512
SH07_RS01565 NONE
SH07_RS01560 NONE
        purH NONE
SH07_RS01550  322746 ..  322773 - -10.4  -4.36914   CGGCGCTGGAGAAAA        CGGGCGGCAACA AAAC CGAAGCCGCCCG         TCAGTTAGGGATCAC  90 71
        zraP  318975 ..  319016 -  -4.5  -2.62616   GCAGTGGCGATACCA CGA-CGCGAGAGTATCGC TGGCAGG GCGATAACCTCACGCTCA TCAATATCAATGTTT  45 449
SH07_RS01500  314459 ..  314474 -  -7.5  -3.15008   TCCGACAAGAAATTA              GCCCC GCAAAT GGGGC               ATTGAATGTAAATTA  62 60
SH07_RS01495 NONE
SH07_RS01490 NONE
SH07_RS01485 NONE
SH07_RS01480 NONE
SH07_RS01475 NONE
        thiH  308503 ..  308528 - -14.1  -4.17762   CAGCCCTCAAAATAA         CAAAACCCACC TTAA GGTGGGTTTCG          CCAGAGAATTATCTC 100 409
SH07_RS01395 NONE
SH07_RS01390  292229 ..  292246 -  -8.4  -4.80417   CAGAAAAATAAGAAA             GGGGAG TATTCG CTCCCC              TGCAAATTATTTGCG 100 32
SH07_RS01345  280002 ..  280016 -  -4.2  -4.79752   GTGAACAAGAGAAAA               CCGCAA TTA TTCCGG               GAAATGTGAAGGACG  71 444
SH07_RS01330  277270 ..  277283 -  -4.5   -3.1552   GGCTATCTATGAAGA               TCACC CGTG GGCGA                ACCGCGAATGCGTAC  49 397
SH07_RS01305 NONE
SH07_RS01300  271500 ..  271515 -    -4  -3.56594   TCAAATGCTGCGAAA              TCGCTT CAGC AAACGA               ATAAATAGCAGGAAT  52 91
SH07_RS01295  268673 ..  268694 - -13.7  -4.41206   AAGTATTTCAGAAAA           CCCTCGCGC AAAA GCACGAGGG            TTTGCAGAAGAGGAA 100 43
SH07_RS01290  266712 ..  266756 - -17.3  -3.53811   CGGATGTGGCGTAAA CGCCTTATCCAGCCTACCG CCGCGAT CTGTAGGCCGGATAAGACG CGTCAAGCGTCGCAT 100 66
SH07_RS01285  265563 ..  265575 -  -9.1  -2.82834   TAGCGGATGAGGATA                TCCGC CGG GCGGA                TGTTGCTCTGTTGAT  63 181
SH07_RS01255 NONE
SH07_RS01250 NONE
        gldA  256167 ..  256185 - -11.7  -3.53343   AATTTTGCGTTCAAA             CTCCCGG ACAAG CCGGGAG             TTTGGAGTAGGTTAT  89 37
SH07_RS01240  256042 ..  256058 -  -7.9  -2.62983   GGGAGTTTCAGATTA              CTGGCAC AGA GTGCCGG              ATGCGGAGTGAACGC  60 1
SH07_RS01235  254830 ..  254844 -  -4.2  -4.25104   TCTCTTCGATGAAAA               GTGCCA TGC TGGCAA               TCCTCTCCGGCGTCA  62 486
SH07_RS01215  250163 ..  250180 -  -2.6     -2.54   AGCAGGTTACAACAT             CGAACC GGATCA GGTACG              TGTGGAATCGCTGGT  38 516
SH07_RS01200 NONE
SH07_RS01195  245512 ..  245525 -  -9.5  -5.02074   GGATTTCCGAAAAAA               GCGCC GCAC GGCGC                TTTTTTTGTGCCTGA 100 53
SH07_RS01185 NONE
SH07_RS01180  241503 ..  241516 -  -5.2  -2.82987   GCAATAGCGACCATA               GCGG GAGAAA CCGC                AGGCAGATTTCGTTG  50 207
SH07_RS01175  240590 ..  240609 - -13.6  -4.05991   AATACAGAGTACAAA            CCCCGTAC AAAA GTACGGGG             CATAATGCAATTATA 100 63
SH07_RS01170 NONE
        hslU  238635 ..  238652 -  -9.1  -5.06816   ACGCGCCAATAAAAA             TGGGGCC TTTC AGCCCCA              TCAAACAATGATGAA 100 56
SH07_RS01160  237665 ..  237679 -  -5.8  -3.08032   CTGTTGGCAAAATCA               TCAATT GTT AATTGA               TATTTGTCAGTTATG  55 36
SH07_RS01155  237089 ..  237104 - -10.4  -5.31456   GTAACGCAGAAAAAA              GGCACC TTGC GGTGCC               TTTCTTATCATTCAA 100 33
SH07_RS01145 NONE
        glpK NONE
SH07_RS01135  232794 ..  232815 - -13.1   -5.7946   CTCCGAACAAAAAAA           TTCCAGTCC CGAA GGACTGGAA            GGCTCAATCGATCAA 100 46
SH07_RS01130  231730 ..  231752 - -10.8  -3.41024   CCCTGCAACAGAAGA           TATTCTTCAA TTG TTGAAGAATA           AGTCGGATAACAAGC  76 266
SH07_RS01110  229811 ..  229831 -  -5.4  -3.41962   GCGAATAAAGGAAGA           TGGCCGCCC CGCA GGGCAGC-A            GGTCTGTGAAACAGT  57 76
SH07_RS01105  228975 ..  228997 - -13.5   -3.6187   AGTTAAGGAAAGTAA           GTGCCGGAT ATGAA ATCCGGCAC           CTGTCAGACTTAAGC 100 35
SH07_RS01075 NONE
        cpxA  221787 ..  221801 -   -10  -3.30124   GTGTAGGCCTGATAA               GACGCT ATC AGCGTC               GCATCAGGCATCCTG  76 93
SH07_RS01055  219434 ..  219448 -  -5.6   -4.6902   GCAGAATTTGAAAAA               GCGGCA GCT TCCCGC               TTTGGTTCCGGCTGG  75 315
SH07_RS01045  217236 ..  217262 - -10.1  -3.05596   GATTCCGGGATTTAA         CGCCAGCGCAG GGCAA CCACACTGGCG         CTTAGGTAGCATGGG  69 521
        rhaB NONE
SH07_RS01020  212597 ..  212643 - -14.3  -2.57931   CGTAGGCCGGATAAG GCGCTCGCGCCGCATCCGGCA ATCAA TGCCTGATGCGACGCTGTCGC GTCTTATCAGGCCTA  95 372
SH07_RS01015 NONE
SH07_RS01010  211359 ..  211382 -   -11  -2.86093   CGAAATTTAAAATAT          TGTGCCGGAG GCAT CTCTGGCACA           TTGGGCAATTACGGC  77 34
SH07_RS01005 NONE
SH07_RS01000 NONE
SH07_RS00995 NONE
SH07_RS00990  206343 ..  206373 -   -14  -2.97475   TTTTTGATGATAAAT       GCAGTGTCGGATGC GGC GCATCCGACACAGT       TCACCCCTTGTGAAG 100 26
SH07_RS00975 NONE
SH07_RS00970 NONE
SH07_RS00965 NONE
SH07_RS00960 NONE
SH07_RS00955  198455 ..  198467 -  -4.7  -3.62864   TAAATTGAGGCCAAA                CCGGC ACT GGCGG                CATAGCTTGAGGTGG  57 124
SH07_RS00950  198247 ..  198258 -    -3  -5.09426   GGTAATGGGAAAAAA                TGAT GTCA ATCA                 GATTGCTGACAACGT  75 19
SH07_RS00905 NONE
SH07_RS00900 NONE
SH07_RS00895  188664 ..  188692 - -12.6  -2.61274   GGCACCTTAATTAAC       GACATACAGCCTC CCGT GAGGCTG-ATGTC        AAACCCAAAAACTGC  88 115
SH07_RS00890  187630 ..  187640 -  -2.6  -3.01857   CATAAAACTGATATA                 TAAA AAC TTTA                 CAGAAGCTGAGCTGT  43 127
SH07_RS00885 NONE
SH07_RS00880  184049 ..  184062 -  -9.5  -3.30619   AATCACTCCTTATAA               CGCCC CGCA GGGCG                TCGTTTATTATTATT  74 39
SH07_RS00875  182586 ..  182600 -    -7  -2.64472   CATTTTTTAAACGTA               GGGAGG CCG CCACCC               ACCAGGATGGAAATA  56 55
        ompL  181784 ..  181808 - -11.5  -3.37612   CTGAAGCTTAATTAA          TGGCCGGAT GTGCTTA ATCCGGCCA          ACGAAAACCGTATCA  86 87
SH07_RS00845 NONE
        glnA  174701 ..  174718 -    -7  -5.28176   TTGACGGAGAAAAAA             GCCCAT GCAGAG ATGGGC              TACAGATAGCTGACA  89 199
        glnL NONE
        glnG  172128 ..  172151 -  -3.1   -3.5947   AATCTTTACACACAA          GCTGTGAAT CACTCC ATCCCCAGC           TCTTTTAACTTACGC  51 10
SH07_RS00825  171811 ..  171864 - -16.1  -2.57931   TGTAGGCCGGATAAG GCGTTTA-CGCCGCATCAGGCATC TGAGCAT GATGCCTGATGCGGCGCTGGTCGC GTCTTATCAGGCCTA 100 75
SH07_RS00810  168355 ..  168381 -  -7.2  -2.55392   AATCTATTGAATTTA         CGGGCCGGATAC GCC ACATCCGGCACA         AGCATTAAGGCAAGA  58 44
SH07_RS00800  164888 ..  164898 -  -8.2   -3.9122   CAGTGCGCTAAAGAA                 GCGC AAG GCGC                 AGATTTTAGCAGAAA  77 116
SH07_RS00795  163901 ..  163934 -   -14  -3.73042   TTGTTCATTAAAATA     CTCACTCGCCTCTG CTCATT CAGAGGCGAGTAAA      ACTTACTTATTCTGA 100 28
        mobA NONE
SH07_RS00765  159130 ..  159163 -  -7.3  -5.60993   TGGCGCAGAAAAAAA     TGCCGGATGCGACGC TGGC GCGTCTTATCCAGCC      TACTCTTGCTTATCC 100 35
        fadB NONE
        fadA  145508 ..  145526 -  -9.5  -5.76633   TGAGATATAAAAAAA             CCCGCCC CTGAC AGGCGGG             AAGAACGGCAACTAA 100 375
        rfaH  142541 ..  142554 -  -4.5  -2.52623   TGGCGTGGAGAAGAT               GCC-GC ATG GCTGGC               TGCCACCACGGATGC  44 71
SH07_RS00645  133590 ..  133610 - -16.9  -3.92659   GGGGTAAAATCCAAA            CCGGGTGGT AAT ACCACCCGG            TCTTTTCTCATTACA 100 36
SH07_RS00635  129932 ..  129950 -  -2.3  -4.41241   GAAATGCGCAGAAAA             TGCCGCA AACCA CGCTGCA             ATGGGGCATTCTGGT  60 205
        rhtB  126668 ..  126697 - -14.3  -3.25823   GCGTCTTCAGAGTAA       GTCGGATAAGGCG TTTA CGCCGCATCCGAC        ATTATTTTTCACGCA 100 34
SH07_RS00595  122474 ..  122486 -  -4.8  -3.06261   TTTTAATTGGTAACA                GCAG TTTAC CTGC                TTTTATGTCTTCAAC  50 36
SH07_RS00590  121504 ..  121529 -  -8.3  -3.07043   GTCAGCATGGCAATA         TGCCCACTCTC ATGC AAGAGTCGGCA          TATTTTTTCAGAATA  67 51
SH07_RS00585 NONE
SH07_RS00580  120653 ..  120681 -  -7.4  -3.25177   TTGTAAAAAACGAGA        GCGGTGGCTTAG TCTGG CTAAGCCACCTG        TTATTCAAAGGCTCC  64 30
SH07_RS00565  118178 ..  118193 -    -6  -3.02263   AGAGTGTGTGGAAGA              GGTGCG CCTG CGCGCC               ACGGTAAGCCGCCCG  53 391
        cyaY  111971 ..  112000 - -11.5  -3.14211   ATTTTTCGTGATGAA       CGTGCCGGA-AAGC GAG GCTTATCCGGCATG       CAATCTTAGCGGAAA  84 31
        hemC NONE
        hemD NONE
SH07_RS00510 NONE
SH07_RS00505  104919 ..  104944 -    -6  -2.53164   TTATGTATCAGGAAG         GCCCCGGAGG TGCTTG CCTCCGGGTG          AGAAGGAACTACTGT  52 34
SH07_RS00500  102568 ..  102581 -  -6.7  -3.30124   CTGTAGGCTGGATAA               GATGC GTCA GCATC                GCATCCGGCAAAGGC  61 63
SH07_RS00385   82551 ..   82564 -  -5.3  -2.73364   CTTTCACCTGAATCA               CTTAC TACA GTAAG                CTCATCGGGATTCAT  49 93
SH07_RS00380   80786 ..   80801 - -10.4  -3.90922   ACGCTGTGTAAAGAA              CGCCGT CAGT ACGGCG               AACTGGTGCGCCCGG  81 236
SH07_RS00370   78184 ..   78200 - -13.7  -4.18802   ACATATATGGCAAAA              GCCCGGA AAA TCCGGGC              TTCGCAGGTCCCTCA 100 104
SH07_RS00365   77765 ..   77798 -  -9.7  -4.45083   GGGAGAGGGAGAAAA     CACTCAAGGCCTTCTC CTG GAGAAGGCCTTGC-TA     TTAGTTGCGGTACAG 100 26
SH07_RS00355   75150 ..   75177 -  -9.2  -4.65895   CGGGTTAGGGAAAAA        TGCCTGAT-AGCG CTT CGCTTATCAGGCC        TACCCGCGCGACAAC 100 42
SH07_RS00320   66698 ..   66710 -  -6.2  -5.15167   GACGATTAATAAAAA                GGGC GAAAT GCCC                TTTTTTTATGTCAGT  87 31
SH07_RS00310   64933 ..   64954 -  -8.7  -3.91196   CTGATACAGATTAAA           TCAGAACGC AGAA GCGGTCTGA            TGAAACAGAATTTGC  80 466
SH07_RS00275 NONE
SH07_RS00270   57423 ..   57436 -  -4.5  -2.60079   CCATCGGATAACCCA               GCCGA CCCT TCAGC                AACAACGATTACAAC  45 41
SH07_RS00230 NONE
SH07_RS00225   46282 ..   46300 - -10.2  -2.71712   GCTGCGCGGTGAAAT             GCCGCAGA CCA TCGGCGGC             GGTATCGGCCAGTCT  67 144
SH07_RS00215   44727 ..   44749 -  -8.5  -2.92102   ATATCTGCCATAAAC          CGCCAC-CTT TATT AAGAGTGGCG           TATTGTACGCTGTGA  65 88
SH07_RS00210   44194 ..   44208 -  -7.2  -2.66977   CACAACTCAAAAACT               GAACAA CAG TTGTTC               TTTGGATAACTACCG  58 96
        gidA NONE
        gidB   41199 ..   41236 -  -5.2  -5.52384   TGCTTACCAAAAAAA  GCCACGTT-A-TCTTGTTG ATG CAA-AAGAGTGAACGTGGC  GTTAAATGTAACCAG  87 113
SH07_RS00195 NONE
SH07_RS00190 NONE
SH07_RS00185   39211 ..   39223 -  -3.3  -3.88331   TTTAAATAAAAGCAA                CGCTT ACT ACGCG                ACAGCGAACATCACG  53 19
SH07_RS00180 NONE
SH07_RS00175 NONE
SH07_RS00170 NONE
SH07_RS00165   35674 ..   35689 -  -2.4  -3.56366   AATAACCTGTTTAAA              CCGCGG CGGC CCCCGA               GACGATCTCGGTGAG  47 5
SH07_RS00160 NONE
        atpC   33776 ..   33797 - -12.3  -5.76949   CACGCGCAAAAAAAA           GCCAGCCTG TTTC CAGACTGGC            TTTTGTGCTTTTCAA 100 48
        glmU NONE
SH07_RS00145   29954 ..   29985 -  -9.6  -4.79352   TTAGCCATAACAAAA      GTCCAG-TATGCTTT TTC ACAGCATAACTGGAC      TGATTTCAGTTTACA 100 146
SH07_RS00140   28225 ..   28237 -  -4.9  -4.72556   TTAAAAATGACAAAA                TAGTT TGG AACTA                GATTTCACTTATCTG  71 237
SH07_RS00135   26764 ..   26775 -  -7.2  -2.82635   AGTTTTATTAGTACA                GCGG CTTA CCGC                 TACTGTCTTTAATAT  59 6
        pstC NONE
        pstA   24680 ..   24733 -  -4.3  -2.71364   GCACTTCGCTAATCA GGCTTACCGTAGGCCGGATCAGGCG TTCA CGCCGCATCCGGCAAAGTGTTAACC GTGTACAGAGTCAAA  45 112
SH07_RS00120 NONE
SH07_RS00115   23084 ..   23114 - -14.3  -3.63054   TAAAGTTATATATAA       CAAATCCCAATAA TTAAG TTATTGGGATTTG       TCTGGTGAATTATTT 100 35
SH07_RS00110   21924 ..   21941 -  -4.1  -2.91328   AACCTGAAAAAAACG             GCCTGAC GTGA ATCAAGC              AATTTTTTTCAGGTT  47 86
SH07_RS00105 NONE
SH07_RS00100   18528 ..   18553 - -12.7  -2.64572   GAAAGAATTAACGCA         TCGCATCCAGA CTGT TCTGAATGCGA          CGATAATTAAGGTGC  88 32
SH07_RS00095 NONE
SH07_RS00090 NONE
SH07_RS00085   14901 ..   14928 - -10.6  -3.39438   TAAATAATGAGAACA        GGCCGGA-GCGTA ATT CACACATCCGGCC        TTATTTCTTAAGCTT  78 39
SH07_RS00065   11498 ..   11522 - -12.2  -5.65927   GATCTAAATAAAAAA         CCCGCCA-GCA ATCA TGCATGGCGGG          TTTTTAACGCGCTAT 100 46
