locus-tag	class	description
SF31_RS00040	COG0814	amino acid
SF31_RS00055	COG2091	lysine biosynthetic process via aminoadipic acid
SF31_RS00060	COG0431	NADPH-dependent FMN reductase
SF31_RS00065	COG2252	PERMEase
SF31_RS00070	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
SF31_RS00080	COG3196	Protein conserved in bacteria
SF31_RS00085	COG0363	glucosamine-6-phosphate deaminase activity
SF31_RS00090	COG2382	esterase
SF31_RS00100	COG2723	6-phospho-beta-galactosidase activity
SF31_RS00105	COG1263	PTS System
SF31_RS00105	COG2190	(PTS) system
SF31_RS00105	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SF31_RS00110	COG3711	transcriptional antiterminator
SF31_RS00115	COG0704	Plays a role in the regulation of phosphate uptake
SF31_RS00120	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
SF31_RS00125	COG0581	inorganic phosphate transmembrane transporter activity
SF31_RS00130	COG0573	inorganic phosphate transmembrane transporter activity
SF31_RS00135	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
SF31_RS00140	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
SF31_RS00190	COG3312	ion transport
SF31_RS00205	COG0716	FMN binding
SF31_RS00210	COG1522	sequence-specific DNA binding
SF31_RS00240	COG1129	ABC transporter
SF31_RS00245	COG1172	Belongs to the binding-protein-dependent transport system permease family
SF31_RS00250	COG1879	ABC-type sugar transport system periplasmic component
SF31_RS00255	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
SF31_RS00260	COG1609	Transcriptional regulator
SF31_RS00265	COG0477	Major facilitator Superfamily
SF31_RS00270	COG2186	Transcriptional regulator
SF31_RS00310	COG3085	chromosome segregation
SF31_RS00315	COG0606	chelatase, subunit chli
SF31_RS00330	COG3978	acetolactate synthase activity
SF31_RS00335	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
SF31_RS00345	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
SF31_RS00350	COG0583	DNA-binding transcription factor activity
SF31_RS00360	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
SF31_RS00370	COG0210	DNA helicase
SF31_RS00385	COG3118	belongs to the thioredoxin family
SF31_RS00395	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
SF31_RS00405	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
SF31_RS00410	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
SF31_RS00415	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
SF31_RS00420	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
SF31_RS00425	COG1088	dTDP-glucose 4,6-dehydratase activity
SF31_RS00430	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
SF31_RS00435	COG0456	acetyltransferase
SF31_RS00440	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
SF31_RS00445	COG2244	polysaccharide biosynthetic process
SF31_RS00465	COG1113	amino acid transport
SF31_RS00490	COG0641	radical SAM
SF31_RS00495	COG3119	arylsulfatase activity
SF31_RS00500	COG3071	HemY protein
SF31_RS00505	COG2959	enzyme of heme biosynthesis
SF31_RS00510	COG1587	Uroporphyrinogen-III synthase
SF31_RS00520	COG3072	Adenylate cyclase
SF31_RS00530	COG5567	small periplasmic lipoprotein
SF31_RS00550	COG1011	Hydrolase
SF31_RS00555	COG0210	DNA helicase
SF31_RS00560	COG3698	Phosphodiester glycosidase
SF31_RS00570	COG0598	Magnesium transport protein CorA
SF31_RS00585	COG2962	Rard protein
SF31_RS00590	COG2050	protein possibly involved in aromatic compounds catabolism
SF31_RS00595	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
SF31_RS00600	COG0514	ATP-dependent DNA helicase (RecQ)
SF31_RS00605	COG1280	lysine exporter protein (LysE YggA)
SF31_RS00610	COG1280	lysine exporter protein (LysE YggA)
SF31_RS00615	COG2267	carboxylic ester hydrolase activity
SF31_RS00620	COG0561	phosphatase activity
SF31_RS00625	COG0697	spore germination
SF31_RS00630	COG0583	DNA-binding transcription factor activity
SF31_RS00640	COG0412	Dienelactone hydrolase
SF31_RS00645	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
SF31_RS00650	COG1322	Protein conserved in bacteria
SF31_RS00660	COG3165	ubiquinone biosynthetic process from chorismate
SF31_RS00670	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
SF31_RS00675	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
SF31_RS00680	COG0805	protein transport
SF31_RS00685	COG0084	hydrolase, TatD family'
SF31_RS00690	COG0250	Participates in transcription elongation, termination and antitermination
SF31_RS00695	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
SF31_RS00700	COG0543	2 iron, 2 sulfur cluster binding
SF31_RS00705	COG0183	Belongs to the thiolase family
SF31_RS00720	COG1739	Uncharacterized protein family UPF0029
SF31_RS00725	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
SF31_RS00730	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
SF31_RS00760	COG1763	Mo-molybdopterin cofactor biosynthetic process
SF31_RS00765	COG0746	molybdenum cofactor guanylyltransferase activity
SF31_RS00770	COG3084	Protein conserved in bacteria
SF31_RS00775	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
SF31_RS00780	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
SF31_RS00785	COG5339	Protein conserved in bacteria
SF31_RS00790	COG0204	Acyl-transferase
SF31_RS00800	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SF31_RS00800	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SF31_RS00815	COG0635	Involved in the biosynthesis of porphyrin-containing compound
SF31_RS00825	COG2204	response regulator
SF31_RS00830	COG3852	Histidine kinase
SF31_RS00835	COG0174	glutamine synthetase
SF31_RS00845	COG1217	gtp-binding protein TYPA
SF31_RS00850	COG2188	Transcriptional regulator
SF31_RS00855	COG1082	Xylose isomerase domain protein TIM barrel
SF31_RS00860	COG2271	Major facilitator Superfamily
SF31_RS00865	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
SF31_RS00870	COG2211	Major facilitator Superfamily
SF31_RS00875	COG2211	Major facilitator Superfamily
SF31_RS00880	COG1501	Belongs to the glycosyl hydrolase 31 family
SF31_RS00885	COG2017	converts alpha-aldose to the beta-anomer
SF31_RS00890	COG2942	2-epimerase
SF31_RS00895	COG3684	Belongs to the aldolase LacD family
SF31_RS00900	COG2084	Dehydrogenase
SF31_RS00905	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
SF31_RS00910	COG1349	DNA-binding transcription factor activity
SF31_RS00915	COG1011	Hydrolase
SF31_RS00930	COG0456	acetyltransferase
SF31_RS00935	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
SF31_RS00940	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
SF31_RS00955	COG2864	formate dehydrogenase
SF31_RS00960	COG0437	4 iron, 4 sulfur cluster binding
SF31_RS00965	COG0243	molybdopterin cofactor binding
SF31_RS00965	COG3383	formate dehydrogenase (NAD+) activity
SF31_RS00970	COG0243	molybdopterin cofactor binding
SF31_RS00970	COG3383	formate dehydrogenase (NAD+) activity
SF31_RS00985	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SF31_RS00985	COG3711	transcriptional antiterminator
SF31_RS00990	COG1363	Peptidase, m42
SF31_RS00995	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SF31_RS00995	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SF31_RS01000	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SF31_RS01045	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
SF31_RS01060	COG2258	MOSC domain
SF31_RS01065	COG2205	protein histidine kinase activity
SF31_RS01070	COG0745	RESPONSE REGULATOR receiver
SF31_RS01075	COG3678	ATP-independent chaperone mediated protein folding
SF31_RS01090	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
SF31_RS01110	COG3152	Membrane
SF31_RS01115	COG3691	Protein conserved in bacteria
SF31_RS01120	COG0589	response to stress
SF31_RS01125	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
SF31_RS01130	COG1494	fructose-1,6-bisphosphatase
SF31_RS01140	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
SF31_RS01155	COG1575	Belongs to the MenA family. Type 1 subfamily
SF31_RS01170	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
SF31_RS01175	COG1609	Transcriptional regulator
SF31_RS01180	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
SF31_RS01190	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
SF31_RS01200	COG0626	cystathionine gamma-synthase activity
SF31_RS01205	COG0527	aspartate kinase activity
SF31_RS01205	COG0460	homoserine dehydrogenase
SF31_RS01215	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
SF31_RS01225	COG0697	spore germination
SF31_RS01230	COG3738	Protein conserved in bacteria
SF31_RS01240	COG0371	Dehydrogenase
SF31_RS01245	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
SF31_RS01250	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
SF31_RS01250	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
SF31_RS01250	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SF31_RS01255	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SF31_RS01260	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SF31_RS01265	COG1882	Formate acetyltransferase
SF31_RS01270	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
SF31_RS01275	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SF31_RS01280	COG2207	Transcriptional regulator
SF31_RS01285	COG2194	sulfuric ester hydrolase activity
SF31_RS01305	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
SF31_RS01320	COG0583	DNA-binding transcription factor activity
SF31_RS01345	COG4206	TonB-dependent receptor
SF31_RS01375	COG0812	UDP-N-acetylmuramate dehydrogenase activity
SF31_RS01380	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
SF31_RS01380	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
SF31_RS01420	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
SF31_RS01425	COG0250	Participates in transcription elongation, termination and antitermination
SF31_RS01465	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
SF31_RS01475	COG2104	thiamine diphosphate biosynthetic process
SF31_RS01480	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
SF31_RS01515	COG3068	Protein conserved in bacteria
SF31_RS01530	COG3678	ATP-independent chaperone mediated protein folding
SF31_RS01535	COG4191	Histidine kinase
SF31_RS01540	COG2204	response regulator
SF31_RS01545	COG0151	Belongs to the GarS family
SF31_RS01590	COG0456	acetyltransferase
SF31_RS01600	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
SF31_RS01605	COG2224	Isocitrate lyase
SF31_RS01620	COG1414	Transcriptional regulator
SF31_RS01625	COG0646	methionine synthase
SF31_RS01625	COG1410	methionine synthase
SF31_RS01630	COG1283	sodium-dependent phosphate transmembrane transporter activity
SF31_RS01640	COG1187	pseudouridine synthase activity
SF31_RS01650	COG0527	aspartate kinase activity
SF31_RS01675	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
SF31_RS01695	COG0477	Major facilitator Superfamily
SF31_RS01695	COG2814	Major facilitator Superfamily
SF31_RS01700	COG3833	ABC-type maltose transport systems, permease component
SF31_RS01705	COG1175	transmembrane transport
SF31_RS01710	COG2182	Extracellular solute-binding protein
SF31_RS01720	COG3842	ATPase activity
SF31_RS01740	COG1357	PFAM Pentapeptide repeats (8 copies)
SF31_RS01760	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
SF31_RS01770	COG0534	Mate efflux family protein
SF31_RS01775	COG3237	CsbD-like
SF31_RS01780	COG0735	belongs to the Fur family
SF31_RS01795	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
SF31_RS01805	COG0604	alcohol dehydrogenase
SF31_RS01810	COG0305	Participates in initiation and elongation during chromosome replication
SF31_RS01815	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
SF31_RS01820	COG1448	Aminotransferase
SF31_RS01830	COG3700	Belongs to the class B bacterial acid phosphatase family
SF31_RS01835	COG0432	Pfam Uncharacterised protein family UPF0047
SF31_RS01840	COG2315	Protein conserved in bacteria
SF31_RS01845	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
SF31_RS01850	COG0629	single-stranded DNA binding
SF31_RS01860	COG4943	cyclic-guanylate-specific phosphodiesterase activity
SF31_RS01865	COG2207	Transcriptional regulator
SF31_RS01870	COG0789	Transcriptional regulator
SF31_RS01875	COG2252	PERMEase
SF31_RS01880	COG0025	NhaP-type Na H and K H
SF31_RS01895	COG3162	membrane
SF31_RS01900	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
SF31_RS01910	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
SF31_RS01915	COG0437	4 iron, 4 sulfur cluster binding
SF31_RS01920	COG3301	Polysulphide reductase, NrfD
SF31_RS01925	COG1138	Cytochrome C-type biogenesis protein
SF31_RS01930	COG3088	subunit of a heme lyase
SF31_RS01935	COG4235	cytochrome complex assembly
SF31_RS01940	COG1301	dicarboxylic acid transport
SF31_RS01945	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
SF31_RS01950	COG3383	formate dehydrogenase (NAD+) activity
SF31_RS01955	COG3383	formate dehydrogenase (NAD+) activity
SF31_RS01960	COG1538	Outer membrane efflux protein
SF31_RS01965	COG1289	transmembrane transporter activity
SF31_RS01970	COG1566	PFAM secretion protein HlyD family protein
SF31_RS01980	COG2015	COG2015, Alkyl sulfatase and related hydrolases
SF31_RS01985	COG1940	carbohydrate kinase activity
SF31_RS01990	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
SF31_RS01995	COG1172	Belongs to the binding-protein-dependent transport system permease family
SF31_RS02000	COG1129	ABC transporter
SF31_RS02005	COG1879	ABC-type sugar transport system periplasmic component
SF31_RS02010	COG1737	Transcriptional regulator
SF31_RS02015	COG0698	ribose 5-phosphate isomerase
SF31_RS02025	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
SF31_RS02030	COG0456	acetyltransferase
SF31_RS02035	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
SF31_RS02040	COG3454	Phosphonate metabolism
SF31_RS02045	COG4778	phosphonate C-P lyase system protein PhnL
SF31_RS02050	COG4107	phosphonate C-P lyase system protein PhnK
SF31_RS02055	COG3627	carbon phosphorus lyase activity
SF31_RS02060	COG3626	phosphonate metabolism
SF31_RS02065	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
SF31_RS02070	COG3624	Phosphonate C-P lyase system protein PhnG
SF31_RS02075	COG2188	Transcriptional regulator
SF31_RS02085	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
SF31_RS02090	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
SF31_RS02095	COG2764	glyoxalase bleomycin resistance protein dioxygenase
SF31_RS02100	COG2824	Alkylphosphonate utilization operon protein PhnA
SF31_RS02105	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
SF31_RS02115	COG0477	Major facilitator Superfamily
SF31_RS02125	COG0642	Histidine kinase
SF31_RS02130	COG0745	RESPONSE REGULATOR receiver
SF31_RS02135	COG2194	sulfuric ester hydrolase activity
SF31_RS02140	COG0531	amino acid
SF31_RS02145	COG2207	Transcriptional regulator
SF31_RS02150	COG1982	Orn Lys Arg decarboxylase major
SF31_RS02155	COG2169	Transcriptional regulator
SF31_RS02165	COG1486	melibiose metabolic process
SF31_RS02170	COG2211	Major facilitator Superfamily
SF31_RS02175	COG3647	Membrane
SF31_RS02180	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
SF31_RS02180	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
SF31_RS02185	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
SF31_RS02195	COG4565	transcriptional regulatory protein
SF31_RS02200	COG3290	protein histidine kinase activity
SF31_RS02205	COG3592	Divergent 4Fe-4S mono-cluster
SF31_RS02210	COG2388	GCN5-related N-acetyl-transferase
SF31_RS02225	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
SF31_RS02230	COG3104	oligopeptide transport
SF31_RS02235	COG1982	Orn Lys Arg decarboxylase major
SF31_RS02240	COG0531	amino acid
SF31_RS02245	COG3710	Transcriptional regulator
SF31_RS02255	COG1309	transcriptional regulator
SF31_RS02260	COG4232	protein-disulfide reductase activity
SF31_RS02270	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
SF31_RS02275	COG1027	Aspartate ammonia-lyase
SF31_RS02280	COG3030	protein affecting phage T7 exclusion by the F plasmid
SF31_RS02285	COG0531	amino acid
SF31_RS02310	COG1509	lysine 2,3-aminomutase activity
SF31_RS02320	COG5510	response to toxic substance
SF31_RS02325	COG5510	response to toxic substance
SF31_RS02330	COG2076	Multidrug Resistance protein
SF31_RS02335	COG3040	lipid binding
SF31_RS02340	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
SF31_RS02355	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
SF31_RS02360	COG1053	succinate dehydrogenase
SF31_RS02370	COG0531	amino acid
SF31_RS02385	COG1511	domain protein
SF31_RS02385	COG3264	Mechanosensitive ion channel
SF31_RS02420	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
SF31_RS02425	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
SF31_RS02425	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
SF31_RS02430	COG0802	atpase or kinase
SF31_RS02435	COG0860	N-Acetylmuramoyl-L-alanine amidase
SF31_RS02455	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
SF31_RS02460	COG0330	HflC and HflK could
SF31_RS02465	COG0330	HflC and HflK could
SF31_RS02470	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
SF31_RS02485	COG0557	exoribonuclease II activity
SF31_RS02490	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
SF31_RS02495	COG3789	protein conserved in bacteria
SF31_RS02500	COG1842	Phage shock protein A
SF31_RS02510	COG3766	membrane
SF31_RS02515	COG5463	Belongs to the UPF0441 family
SF31_RS02520	COG0754	glutathionylspermidine amidase activity
SF31_RS02525	COG1960	acyl-CoA dehydrogenase activity
SF31_RS02535	COG3650	response to hydrogen peroxide
SF31_RS02540	COG1073	alpha beta
SF31_RS02555	COG3037	sugar-specific permease SgaT UlaA
SF31_RS02560	COG3414	Phosphotransferase system galactitol-specific IIB component
SF31_RS02565	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SF31_RS02605	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
SF31_RS02620	COG1309	transcriptional regulator
SF31_RS02625	COG3061	Opacity-associated protein A
SF31_RS02630	COG0545	Peptidyl-prolyl cis-trans isomerase
SF31_RS02635	COG1113	amino acid transport
SF31_RS02645	COG0697	spore germination
SF31_RS02650	COG0702	epimerase
SF31_RS02655	COG1733	regulation of RNA biosynthetic process
SF31_RS02660	COG0737	Belongs to the 5'-nucleotidase family
SF31_RS02665	COG1218	3'(2'),5'-bisphosphate nucleotidase
SF31_RS02675	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
SF31_RS02685	COG1253	flavin adenine dinucleotide binding
SF31_RS02700	COG0729	surface antigen
SF31_RS02705	COG2911	Protein conserved in bacteria
SF31_RS02710	COG2105	PFAM AIG2 family protein
SF31_RS02715	COG2336	PFAM SpoVT AbrB
SF31_RS02720	COG2337	Toxic component of a toxin-antitoxin (TA) module
SF31_RS02725	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
SF31_RS02730	COG1879	ABC-type sugar transport system periplasmic component
SF31_RS02735	COG1129	ABC transporter
SF31_RS02740	COG1172	Belongs to the binding-protein-dependent transport system permease family
SF31_RS02745	COG1172	Belongs to the binding-protein-dependent transport system permease family
SF31_RS02755	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
SF31_RS02765	COG0312	modulator of DNA gyrase
SF31_RS02770	COG3783	Cytochrome b(562)
SF31_RS02775	COG0602	queuosine metabolic process
SF31_RS02780	COG1328	CTP reductase activity
SF31_RS02785	COG0366	Alpha amylase catalytic
SF31_RS02790	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SF31_RS02790	COG1263	PTS System
SF31_RS02795	COG1609	Transcriptional regulator
SF31_RS02800	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
SF31_RS02805	COG0251	oxidation-reduction process
SF31_RS02830	COG0251	oxidation-reduction process
SF31_RS02835	COG1028	Short-chain dehydrogenase reductase Sdr
SF31_RS02840	COG1309	transcriptional regulator
SF31_RS02845	COG2731	YhcH YjgK YiaL family protein
SF31_RS02855	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
SF31_RS02860	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
SF31_RS02865	COG0456	acetyltransferase
SF31_RS02870	COG4269	membrane
SF31_RS02875	COG0525	valine-tRNA ligase activity
SF31_RS02880	COG2927	DNA polymerase III (CHI subunit)
SF31_RS02890	COG0795	lipopolysaccharide-transporting ATPase activity
SF31_RS02895	COG0795	lipopolysaccharide-transporting ATPase activity
SF31_RS02900	COG0433	COG0433 Predicted ATPase
SF31_RS02905	COG1609	Transcriptional regulator
SF31_RS02910	COG2610	gluconate transmembrane transporter activity
SF31_RS02915	COG1028	Short-chain dehydrogenase reductase Sdr
SF31_RS02920	COG1063	alcohol dehydrogenase
SF31_RS02925	COG3265	gluconokinase activity
SF31_RS02930	COG1064	alcohol dehydrogenase
SF31_RS02940	COG0582	viral genome integration into host DNA
SF31_RS03070	COG2801	Transposase and inactivated derivatives
SF31_RS03315	COG3385	transposase activity
SF31_RS03320	COG2814	Major facilitator Superfamily
SF31_RS03325	COG0673	inositol 2-dehydrogenase activity
SF31_RS03345	COG2826	transposase and inactivated derivatives, IS30 family
SF31_RS03360	COG2085	NADP oxidoreductase coenzyme F420-dependent
SF31_RS03365	COG1120	ATPase activity
SF31_RS03370	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SF31_RS03375	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SF31_RS03380	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
SF31_RS03385	COG4772	TonB-dependent receptor
SF31_RS03390	COG3712	iron ion homeostasis
SF31_RS03395	COG1595	DNA-templated transcription, initiation
SF31_RS03415	COG2390	Transcriptional regulator
SF31_RS03425	COG2610	gluconate transmembrane transporter activity
SF31_RS03430	COG0129	dihydroxy-acid dehydratase activity
SF31_RS03435	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
SF31_RS03440	COG1414	Transcriptional regulator
SF31_RS03445	COG1349	DNA-binding transcription factor activity
SF31_RS03450	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
SF31_RS03455	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SF31_RS03460	COG0434	BtpA family
SF31_RS03465	COG3775	system Galactitol-specific IIC component
SF31_RS03470	COG3414	Phosphotransferase system galactitol-specific IIB component
SF31_RS03475	COG1363	Peptidase, m42
SF31_RS03480	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
SF31_RS03485	COG3153	acetyltransferase
SF31_RS03505	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
SF31_RS03505	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
SF31_RS03515	COG3055	Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
SF31_RS03520	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
SF31_RS03535	COG0582	viral genome integration into host DNA
SF31_RS03540	COG4974	Belongs to the 'phage' integrase family
SF31_RS03550	COG3539	Fimbrial protein
SF31_RS03555	COG3539	Fimbrial protein
SF31_RS03560	COG3121	Chaperone
SF31_RS03565	COG3188	usher protein
SF31_RS03570	COG3539	Fimbrial protein
SF31_RS03575	COG3539	Fimbrial protein
SF31_RS03580	COG3539	Fimbrial protein
SF31_RS03585	COG2610	gluconate transmembrane transporter activity
SF31_RS03600	COG0246	Mannitol dehydrogenase
SF31_RS03610	COG2186	Transcriptional regulator
SF31_RS03640	COG0583	DNA-binding transcription factor activity
SF31_RS03645	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
SF31_RS03650	COG0700	Nucleoside recognition
SF31_RS03655	COG3366	ferrous iron transmembrane transporter activity
SF31_RS03665	COG0477	Major facilitator Superfamily
SF31_RS03670	COG3204	pilus organization
SF31_RS03680	COG1924	4 iron, 4 sulfur cluster binding
SF31_RS03685	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
SF31_RS03690	COG2733	membrane
SF31_RS03695	COG2814	Major facilitator Superfamily
SF31_RS03705	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
SF31_RS03710	COG5457	Domain of unknown function (DUF1127)
SF31_RS03715	COG1196	nuclear chromosome segregation
SF31_RS03725	COG4268	DNA restriction-modification system
SF31_RS03730	COG1401	restriction endodeoxyribonuclease activity
SF31_RS03740	COG0732	type I restriction modification DNA specificity domain
SF31_RS03745	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
SF31_RS03750	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
SF31_RS03765	COG1715	Restriction endonuclease
SF31_RS03770	COG0523	cobalamin synthesis protein
SF31_RS03775	COG2879	small protein
SF31_RS03780	COG1966	Carbon starvation protein
SF31_RS03790	COG0840	transmembrane signaling receptor activity
SF31_RS03795	COG2271	Major facilitator Superfamily
SF31_RS03800	COG1802	Transcriptional regulator
SF31_RS03805	COG1063	alcohol dehydrogenase
SF31_RS03820	COG1484	DNA-dependent DNA replication
SF31_RS03835	COG2966	Psort location CytoplasmicMembrane, score
SF31_RS03840	COG2197	response regulator
SF31_RS03845	COG2197	response regulator
SF31_RS03850	COG4114	ferric iron reductase
SF31_RS03880	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
SF31_RS03885	COG0456	acetyltransferase
SF31_RS03890	COG1011	Hydrolase
SF31_RS03900	COG2823	Periplasmic or secreted lipoprotein
SF31_RS03910	COG4667	esterase of the alpha-beta hydrolase superfamily
SF31_RS03915	COG0084	hydrolase, TatD family'
SF31_RS03920	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
SF31_RS03925	COG1328	CTP reductase activity
SF31_RS03955	COG3550	peptidyl-serine autophosphorylation
SF31_RS03965	COG3726	membrane protein affecting hemolysin expression
SF31_RS03970	COG0560	Phosphoserine phosphatase
SF31_RS03975	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
SF31_RS03980	COG1056	cytidyltransferase-related domain
SF31_RS03980	COG3172	ATPase kinase involved in NAD metabolism
SF31_RS03990	COG0488	(ABC) transporter
SF31_RS03995	COG0741	lytic transglycosylase activity
SF31_RS04015	COG3708	Transcriptional regulator
SF31_RS04015	COG2207	Transcriptional regulator
SF31_RS04020	COG3045	CreA protein
SF31_RS04025	COG0745	RESPONSE REGULATOR receiver
SF31_RS04030	COG2205	protein histidine kinase activity
SF31_RS04035	COG4452	Inner membrane protein CreD
SF31_RS04040	COG0745	RESPONSE REGULATOR receiver
SF31_RS04050	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
SF31_RS04060	COG0460	homoserine dehydrogenase
SF31_RS04060	COG0527	aspartate kinase activity
SF31_RS04070	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
SF31_RS04090	COG1115	amino acid carrier protein
SF31_RS04095	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
SF31_RS04100	COG0521	Mo-molybdopterin cofactor biosynthetic process
SF31_RS04105	COG1584	GPR1 FUN34 yaaH family protein
SF31_RS04110	COG4735	regulation of single-species biofilm formation
SF31_RS04130	COG3385	transposase activity
SF31_RS04140	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
SF31_RS04145	COG0583	DNA-binding transcription factor activity
SF31_RS04170	COG0196	riboflavin kinase activity
SF31_RS04185	COG1047	Peptidyl-prolyl cis-trans
SF31_RS04215	COG0505	Belongs to the CarA family
SF31_RS04220	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
SF31_RS04275	COG0644	oxidoreductase
SF31_RS04280	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
SF31_RS04285	COG2271	Major facilitator Superfamily
SF31_RS04300	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
SF31_RS04325	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
SF31_RS04330	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
SF31_RS04335	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
SF31_RS04345	COG0564	pseudouridine synthase activity
SF31_RS04355	COG0417	DNA replication proofreading
SF31_RS04360	COG0235	Class ii aldolase
SF31_RS04365	COG2160	L-arabinose isomerase activity
SF31_RS04370	COG1069	ribulokinase activity
SF31_RS04375	COG4977	sequence-specific DNA binding
SF31_RS04380	COG0586	Pfam SNARE associated Golgi protein
SF31_RS04385	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
SF31_RS04390	COG1178	ABC-type Fe3 transport system permease component
SF31_RS04395	COG4143	(ABC) transporter
SF31_RS04400	COG4533	DNA binding
SF31_RS04410	COG2814	Major facilitator Superfamily
SF31_RS04425	COG0473	3-isopropylmalate dehydrogenase activity
SF31_RS04440	COG0583	DNA-binding transcription factor activity
SF31_RS04445	COG0028	Belongs to the TPP enzyme family
SF31_RS04450	COG0440	acetolactate synthase activity
SF31_RS04460	COG1609	Transcriptional regulator
SF31_RS04465	COG2001	Belongs to the MraZ family
SF31_RS04475	COG3116	cell division
SF31_RS04480	COG0768	penicillin binding
SF31_RS04485	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
SF31_RS04490	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
SF31_RS04500	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
SF31_RS04505	COG0772	Belongs to the SEDS family
SF31_RS04520	COG1181	Belongs to the D-alanine--D-alanine ligase family
SF31_RS04525	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
SF31_RS04530	COG0849	cell division
SF31_RS04535	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
SF31_RS04555	COG0494	nUDIX hydrolase
SF31_RS04575	COG0237	dephospho-CoA kinase activity
SF31_RS04585	COG1459	type II secretion system
SF31_RS04590	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
SF31_RS04595	COG4969	Belongs to the N-Me-Phe pilin family
SF31_RS04605	COG0157	Belongs to the NadC ModD family
SF31_RS04610	COG3023	N-Acetylmuramoyl-L-alanine amidase
SF31_RS04615	COG3725	Membrane protein required for beta-lactamase induction
SF31_RS04620	COG1113	amino acid transport
SF31_RS04625	COG2186	Transcriptional regulator
SF31_RS04630	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
SF31_RS04635	COG0508	dehydrogenase complex catalyzes the overall conversion of
SF31_RS04640	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
SF31_RS04645	COG3064	Membrane
SF31_RS04650	COG1049	propionate catabolic process, 2-methylcitrate cycle
SF31_RS04675	COG2132	Multicopper oxidase
SF31_RS04680	COG4993	Dehydrogenase
SF31_RS04685	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
SF31_RS04690	COG0288	reversible hydration of carbon dioxide
SF31_RS04695	COG1131	(ABC) transporter
SF31_RS04700	COG0842	Transport permease protein
SF31_RS04705	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
SF31_RS04710	COG0726	polysaccharide deacetylase
SF31_RS04720	COG5464	transposase or invertase
SF31_RS04735	COG3539	Fimbrial protein
SF31_RS04740	COG3539	Fimbrial protein
SF31_RS04745	COG3539	Fimbrial protein
SF31_RS04750	COG3539	Fimbrial protein
SF31_RS04755	COG3188	usher protein
SF31_RS04760	COG3121	Chaperone
SF31_RS04765	COG3539	Fimbrial protein
SF31_RS04770	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
SF31_RS04775	COG0617	tRNA 3'-terminal CCA addition
SF31_RS04785	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
SF31_RS04795	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
SF31_RS04800	COG1643	Atp-dependent helicase
SF31_RS04810	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SF31_RS04815	COG4774	siderophore transport
SF31_RS04820	COG1120	ATPase activity
SF31_RS04825	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
SF31_RS04830	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SF31_RS04850	COG2860	membrane
SF31_RS04855	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
SF31_RS04870	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
SF31_RS04875	COG3835	regulator
SF31_RS04885	COG1408	metallophosphoesterase
SF31_RS04900	COG0024	Methionine aminopeptidase
SF31_RS04925	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
SF31_RS04930	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
SF31_RS04935	COG0575	Belongs to the CDS family
SF31_RS04940	COG0750	zinc metalloprotease
SF31_RS04950	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
SF31_RS04955	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
SF31_RS04980	COG0587	DNA-directed DNA polymerase activity
SF31_RS04990	COG1982	Orn Lys Arg decarboxylase major
SF31_RS04995	COG0346	lactoylglutathione lyase activity
SF31_RS05000	COG0037	tRNA processing
SF31_RS05005	COG4568	rho-dependent transcription termination
SF31_RS05015	COG4681	YaeQ
SF31_RS05020	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
SF31_RS05025	COG3015	lipoprotein NlpE involved in copper resistance
SF31_RS05030	COG0791	NLP P60 protein
SF31_RS05040	COG1720	tRNA m6t6A37 methyltransferase activity
SF31_RS05050	COG1464	Belongs to the NlpA lipoprotein family
SF31_RS05055	COG2011	ABC-type metal ion transport system permease component
SF31_RS05060	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
SF31_RS05065	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
SF31_RS05100	COG0656	L-ascorbic acid biosynthetic process
SF31_RS05105	COG0583	DNA-binding transcription factor activity
SF31_RS05115	COG2226	methyltransferase
SF31_RS05120	COG0741	lytic transglycosylase activity
SF31_RS05120	COG1388	LysM domain
SF31_RS05130	COG2226	methyltransferase
SF31_RS05140	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
SF31_RS05160	COG4104	PAAR repeat-containing protein
SF31_RS05165	COG5433	transposase activity
SF31_RS05170	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
SF31_RS05180	COG1960	acyl-CoA dehydrogenase activity
SF31_RS05190	COG0121	glutamine amidotransferase
SF31_RS05195	COG3034	peptidoglycan biosynthetic process
SF31_RS05200	COG3041	Addiction module toxin RelE StbE family
SF31_RS05205	COG3077	Addiction module antitoxin, RelB DinJ family
SF31_RS05210	COG0791	NLP P60 protein
SF31_RS05215	COG1943	Transposase
SF31_RS05235	COG2161	toxin-antitoxin pair type II binding
SF31_RS05245	COG0454	-acetyltransferase
SF31_RS05250	COG1690	Belongs to the RtcB family
SF31_RS05255	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
SF31_RS05260	COG2195	Cleaves the N-terminal amino acid of tripeptides
SF31_RS05280	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
SF31_RS05310	COG2003	Belongs to the UPF0758 family
SF31_RS05330	COG2378	regulation of single-species biofilm formation
SF31_RS05345	COG3596	GTP binding
SF31_RS05350	COG0583	DNA-binding transcription factor activity
SF31_RS05355	COG2963	transposase activity
SF31_RS05360	COG2826	transposase and inactivated derivatives, IS30 family
SF31_RS05365	COG2801	Transposase and inactivated derivatives
SF31_RS05380	COG3344	reverse transcriptase
SF31_RS05390	COG0833	amino acid
SF31_RS05395	COG2040	homocysteine
SF31_RS05400	COG3842	ATPase activity
SF31_RS05405	COG1178	ABC-type Fe3 transport system permease component
SF31_RS05410	COG1662	PFAM IS1 transposase
SF31_RS05415	COG1662	PFAM IS1 transposase
SF31_RS05415	COG3677	Transposase
SF31_RS05420	COG2963	transposase activity
SF31_RS05430	COG2801	Transposase and inactivated derivatives
SF31_RS05430	COG3415	Transposase
SF31_RS05435	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
SF31_RS05440	COG0129	dihydroxy-acid dehydratase activity
SF31_RS05445	COG2211	Major facilitator Superfamily
SF31_RS05450	COG3507	Belongs to the glycosyl hydrolase 43 family
SF31_RS05455	COG1414	Transcriptional regulator
SF31_RS05460	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
SF31_RS05465	COG1662	PFAM IS1 transposase
SF31_RS05470	COG1061	Type III restriction enzyme res subunit
SF31_RS05480	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
SF31_RS05500	COG0582	viral genome integration into host DNA
SF31_RS05510	COG0583	DNA-binding transcription factor activity
SF31_RS05515	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
SF31_RS05520	COG1529	Aldehyde oxidase and xanthine dehydrogenase
SF31_RS05525	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
SF31_RS05530	COG2080	2 iron, 2 sulfur cluster binding
SF31_RS05535	COG3477	response to acidic pH
SF31_RS05540	COG0727	PFAM Uncharacterised protein family (UPF0153)
SF31_RS05545	COG3121	Chaperone
SF31_RS05555	COG3188	usher protein
SF31_RS05595	COG1388	LysM domain
SF31_RS05605	COG2801	Transposase and inactivated derivatives
SF31_RS05610	COG2207	Transcriptional regulator
SF31_RS05610	COG3708	Transcriptional regulator
SF31_RS05615	COG3059	membrane
SF31_RS05625	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
SF31_RS05630	COG2207	Transcriptional regulator
SF31_RS05635	COG0247	lactate metabolic process
SF31_RS05640	COG1139	Iron-sulfur cluster binding protein
SF31_RS05645	COG1556	Lactate utilization protein
SF31_RS05675	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
SF31_RS05685	COG2200	EAL domain
SF31_RS05685	COG2771	luxR family
SF31_RS05690	COG0583	DNA-binding transcription factor activity
SF31_RS05700	COG0666	response to abiotic stimulus
SF31_RS05710	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
SF31_RS05715	COG1304	FMN binding
SF31_RS05725	COG0549	Belongs to the carbamate kinase family
SF31_RS05730	COG0402	S-adenosylhomocysteine deaminase activity
SF31_RS05735	COG1064	alcohol dehydrogenase
SF31_RS05750	COG1280	lysine exporter protein (LysE YggA)
SF31_RS05760	COG3829	transcription factor binding
SF31_RS05765	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
SF31_RS05770	COG0372	Belongs to the citrate synthase family
SF31_RS05780	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
SF31_RS05785	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
SF31_RS05790	COG0402	S-adenosylhomocysteine deaminase activity
SF31_RS05795	COG0583	DNA-binding transcription factor activity
SF31_RS05800	COG0288	reversible hydration of carbon dioxide
SF31_RS05810	COG2807	transmembrane transport
SF31_RS05815	COG0110	maltose O-acetyltransferase activity
SF31_RS05820	COG2223	nitrite transmembrane transporter activity
SF31_RS05825	COG3250	beta-galactosidase activity
SF31_RS05830	COG1609	Transcriptional regulator
SF31_RS05835	COG1414	Transcriptional regulator
SF31_RS05855	COG3971	2-oxopent-4-enoate hydratase activity
SF31_RS05870	COG2814	Major facilitator Superfamily
SF31_RS05875	COG3122	Protein conserved in bacteria
SF31_RS05885	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
SF31_RS05915	COG1215	transferase activity, transferring glycosyl groups
SF31_RS05920	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
SF31_RS05925	COG4521	taurine ABC transporter
SF31_RS05935	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
SF31_RS05940	COG2175	clavaminate synthase activity
SF31_RS05945	COG0113	porphobilinogen synthase activity
SF31_RS05955	COG2801	Transposase and inactivated derivatives
SF31_RS05965	COG3468	outer membrane autotransporter barrel domain protein
SF31_RS05970	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
SF31_RS05975	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
SF31_RS05985	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
SF31_RS06005	COG1181	Belongs to the D-alanine--D-alanine ligase family
SF31_RS06020	COG1785	Belongs to the alkaline phosphatase family
SF31_RS06030	COG3706	GGDEF domain
SF31_RS06035	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
SF31_RS06060	COG4126	flavin adenine dinucleotide binding
SF31_RS06080	COG1940	carbohydrate kinase activity
SF31_RS06085	COG2814	Major facilitator Superfamily
SF31_RS06090	COG0419	ATPase involved in DNA repair
SF31_RS06095	COG0420	3'-5' exonuclease activity
SF31_RS06100	COG0745	RESPONSE REGULATOR receiver
SF31_RS06105	COG5002	protein histidine kinase activity
SF31_RS06110	COG1114	Component of the transport system for branched-chain amino acids
SF31_RS06115	COG1113	amino acid transport
SF31_RS06120	COG0366	Alpha amylase catalytic
SF31_RS06140	COG1862	Preprotein translocase
SF31_RS06145	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
SF31_RS06150	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
SF31_RS06155	COG1403	HNH endonuclease
SF31_RS06165	COG3248	Nucleoside-binding outer membrane protein
SF31_RS06170	COG4238	major outer membrane lipoprotein
SF31_RS06180	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
SF31_RS06180	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
SF31_RS06195	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
SF31_RS06200	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
SF31_RS06205	COG0667	Aldo Keto reductase
SF31_RS06215	COG0142	geranyltranstransferase activity
SF31_RS06230	COG0693	protein deglycase activity
SF31_RS06235	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
SF31_RS06245	COG2814	Major facilitator Superfamily
SF31_RS06255	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
SF31_RS06260	COG1845	cytochrome c oxidase, subunit III
SF31_RS06265	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
SF31_RS06270	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
SF31_RS06275	COG2223	nitrite transmembrane transporter activity
SF31_RS06280	COG3056	Lipoprotein
SF31_RS06285	COG0271	Belongs to the BolA IbaG family
SF31_RS06310	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
SF31_RS06315	COG0776	regulation of translation
SF31_RS06320	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
SF31_RS06325	COG1555	photosystem II stabilization
SF31_RS06330	COG0824	Thioesterase
SF31_RS06340	COG4533	DNA binding
SF31_RS06350	COG1522	sequence-specific DNA binding
SF31_RS06355	COG1132	(ABC) transporter
SF31_RS06360	COG1132	(ABC) transporter
SF31_RS06365	COG0347	Belongs to the P(II) protein family
SF31_RS06370	COG0004	ammonium transporteR
SF31_RS06375	COG1946	Acyl-CoA thioesterase
SF31_RS06380	COG3126	Type III secretion system lipoprotein chaperone (YscW)
SF31_RS06385	COG3695	enzyme binding
SF31_RS06390	COG5507	3-demethylubiquinone-9 3-methyltransferase
SF31_RS06395	COG4943	cyclic-guanylate-specific phosphodiesterase activity
SF31_RS06405	COG0110	maltose O-acetyltransferase activity
SF31_RS06420	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
SF31_RS06425	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
SF31_RS06430	COG1309	transcriptional regulator
SF31_RS06435	COG1196	nuclear chromosome segregation
SF31_RS06435	COG3264	Mechanosensitive ion channel
SF31_RS06450	COG3923	Primosomal replication protein n
SF31_RS06455	COG2832	Protein of unknown function (DUF454)
SF31_RS06465	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
SF31_RS06500	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
SF31_RS06505	COG4651	solute:proton antiporter activity
SF31_RS06505	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
SF31_RS06510	COG2223	nitrite transmembrane transporter activity
SF31_RS06515	COG0737	Belongs to the 5'-nucleotidase family
SF31_RS06520	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
SF31_RS06525	COG3735	TraB family
SF31_RS06530	COG3093	addiction module antidote protein HigA
SF31_RS06535	COG2217	Heavy metal translocating P-type atpase
SF31_RS06540	COG2066	Belongs to the glutaminase family
SF31_RS06545	COG0531	amino acid
SF31_RS06550	COG0789	Transcriptional regulator
SF31_RS06555	COG1585	Membrane protein implicated in regulation of membrane protease activity
SF31_RS06560	COG0330	HflC and HflK could
SF31_RS06565	COG4619	ABC transporter
SF31_RS06570	COG0390	transport system, permease component
SF31_RS06575	COG3118	belongs to the thioredoxin family
SF31_RS06580	COG0300	oxidoreductase activity
SF31_RS06585	COG2755	lipolytic protein G-D-S-L family
SF31_RS06590	COG4181	ATPase activity
SF31_RS06595	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
SF31_RS06600	COG3209	COG3209 Rhs family protein
SF31_RS06610	COG3209	COG3209 Rhs family protein
SF31_RS06620	COG2801	Transposase and inactivated derivatives
SF31_RS06630	COG0583	DNA-binding transcription factor activity
SF31_RS06640	COG1414	Transcriptional regulator
SF31_RS06645	COG3960	tartronate-semialdehyde synthase activity
SF31_RS06650	COG3622	Belongs to the hyi family
SF31_RS06655	COG2084	Dehydrogenase
SF31_RS06660	COG1953	Uracil, thiamine, allantoin
SF31_RS06670	COG2233	PERMEase
SF31_RS06675	COG1929	Belongs to the glycerate kinase type-1 family
SF31_RS06680	COG3257	ureidoglycine aminohydrolase activity
SF31_RS06685	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
SF31_RS06690	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
SF31_RS06695	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
SF31_RS06700	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
SF31_RS06710	COG0549	Belongs to the carbamate kinase family
SF31_RS06715	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
SF31_RS06720	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
SF31_RS06730	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
SF31_RS06740	COG1988	membrane-bound metal-dependent
SF31_RS06745	COG2501	S4 domain
SF31_RS06755	COG3539	Fimbrial protein
SF31_RS06760	COG3121	Chaperone
SF31_RS06765	COG3188	usher protein
SF31_RS06770	COG3539	Fimbrial protein
SF31_RS06775	COG3539	Fimbrial protein
SF31_RS06780	COG2197	response regulator
SF31_RS06790	COG0582	viral genome integration into host DNA
SF31_RS06815	COG2801	Transposase and inactivated derivatives
SF31_RS06825	COG2076	Multidrug Resistance protein
SF31_RS06835	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
SF31_RS06840	COG1881	PFAM PEBP family protein
SF31_RS06845	COG2207	Transcriptional regulator
SF31_RS06900	COG3772	lysozyme
SF31_RS06920	COG5562	phage envelope protein
SF31_RS06940	COG4220	transposase activity
SF31_RS06950	COG0500	methyltransferase
SF31_RS06960	COG2207	Transcriptional regulator
SF31_RS06965	COG4571	Outer membrane protease
SF31_RS06975	COG2207	Transcriptional regulator
SF31_RS06985	COG4783	chaperone-mediated protein folding
SF31_RS06990	COG1215	transferase activity, transferring glycosyl groups
SF31_RS06995	COG5002	protein histidine kinase activity
SF31_RS07000	COG0745	RESPONSE REGULATOR receiver
SF31_RS07005	COG1538	Outer membrane efflux protein
SF31_RS07010	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
SF31_RS07015	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
SF31_RS07020	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
SF31_RS07025	COG1113	amino acid transport
SF31_RS07030	COG0668	transmembrane transport
SF31_RS07035	COG0778	Nitroreductase
SF31_RS07040	COG2315	Protein conserved in bacteria
SF31_RS07065	COG3385	transposase activity
SF31_RS07070	COG2977	Belongs to the P-Pant transferase superfamily
SF31_RS07075	COG4771	TonB-dependent receptor
SF31_RS07080	COG2382	esterase
SF31_RS07085	COG3251	PFAM MbtH domain protein
SF31_RS07090	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
SF31_RS07090	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
SF31_RS07095	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
SF31_RS07100	COG1120	ATPase activity
SF31_RS07105	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SF31_RS07110	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SF31_RS07120	COG4592	Periplasmic binding protein
SF31_RS07125	COG1169	isochorismate synthase
SF31_RS07130	COG1021	2,3-dihydroxybenzoate-AMP ligase
SF31_RS07135	COG3433	isochorismatase activity
SF31_RS07135	COG1535	isochorismatase
SF31_RS07140	COG1028	Short-chain dehydrogenase reductase Sdr
SF31_RS07145	COG2050	protein possibly involved in aromatic compounds catabolism
SF31_RS07150	COG1966	Carbon starvation protein
SF31_RS07155	COG2879	small protein
SF31_RS07160	COG0371	Dehydrogenase
SF31_RS07165	COG0436	Aminotransferase
SF31_RS07170	COG1475	DNA binding
SF31_RS07175	COG3969	phosphoadenosine phosphosulfate
SF31_RS07180	COG0583	DNA-binding transcription factor activity
SF31_RS07185	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
SF31_RS07190	COG0450	alkyl hydroperoxide reductase
SF31_RS07195	COG3634	alkyl hydroperoxide reductase activity
SF31_RS07200	COG0589	response to stress
SF31_RS07205	COG1063	alcohol dehydrogenase
SF31_RS07215	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
SF31_RS07220	COG3719	Belongs to the RNase T2 family
SF31_RS07225	COG0471	metal ion transport
SF31_RS07240	COG3051	citrate lyase alpha subunit
SF31_RS07245	COG2301	Belongs to the HpcH HpaI aldolase family
SF31_RS07255	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
SF31_RS07260	COG3290	protein histidine kinase activity
SF31_RS07265	COG4565	transcriptional regulatory protein
SF31_RS07270	COG3069	C4-dicarboxylate transmembrane transporter activity
SF31_RS07295	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
SF31_RS07305	COG0583	DNA-binding transcription factor activity
SF31_RS07325	COG1686	Belongs to the peptidase S11 family
SF31_RS07330	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
SF31_RS07335	COG0772	Belongs to the SEDS family
SF31_RS07340	COG0768	penicillin binding
SF31_RS07350	COG0799	negative regulation of ribosome biogenesis
SF31_RS07355	COG0406	alpha-ribazole phosphatase activity
SF31_RS07365	COG1466	dna polymerase III delta subunit
SF31_RS07380	COG2888	peptidyl-tyrosine sulfation
SF31_RS07385	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
SF31_RS07395	COG2214	Heat shock protein DnaJ domain protein
SF31_RS07400	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
SF31_RS07410	COG2214	Heat shock protein DnaJ domain protein
SF31_RS07415	COG0443	Heat shock 70 kDa protein
SF31_RS07425	COG1126	abc transporter atp-binding protein
SF31_RS07430	COG0765	amino acid transport
SF31_RS07435	COG0765	amino acid transport
SF31_RS07440	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SF31_RS07450	COG0815	Transfers the fatty acyl group on membrane lipoproteins
SF31_RS07455	COG4535	Mg2 and Co2 transporter CorC
SF31_RS07465	COG1702	phosphate starvation-inducible protein PhoH
SF31_RS07475	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
SF31_RS07515	COG0367	asparagine synthase
SF31_RS07520	COG0647	UMP catabolic process
SF31_RS07525	COG1846	Transcriptional regulator
SF31_RS07525	COG1940	carbohydrate kinase activity
SF31_RS07530	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
SF31_RS07540	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SF31_RS07540	COG2190	(PTS) system
SF31_RS07540	COG1263	PTS System
SF31_RS07560	COG0735	belongs to the Fur family
SF31_RS07575	COG0716	FMN binding
SF31_RS07585	COG0596	Alpha beta hydrolase
SF31_RS07590	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
SF31_RS07595	COG0033	Phosphoglucomutase
SF31_RS07615	COG0531	amino acid
SF31_RS07620	COG1982	Orn Lys Arg decarboxylase major
SF31_RS07630	COG0745	RESPONSE REGULATOR receiver
SF31_RS07635	COG2205	protein histidine kinase activity
SF31_RS07665	COG3209	COG3209 Rhs family protein
SF31_RS07675	COG3209	COG3209 Rhs family protein
SF31_RS07685	COG5433	transposase activity
SF31_RS07695	COG5433	transposase activity
SF31_RS07700	COG3272	Protein of unknown function (DUF1722)
SF31_RS07705	COG0415	Belongs to the DNA photolyase family
SF31_RS07710	COG3104	oligopeptide transport
SF31_RS07715	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
SF31_RS07720	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
SF31_RS07725	COG1984	allophanate hydrolase subunit 2
SF31_RS07740	COG3180	Ammonia monooxygenase
SF31_RS07745	COG3539	Fimbrial protein
SF31_RS07750	COG3121	Chaperone
SF31_RS07755	COG3188	usher protein
SF31_RS07760	COG3539	Fimbrial protein
SF31_RS07765	COG0372	Belongs to the citrate synthase family
SF31_RS07775	COG2009	succinate dehydrogenase
SF31_RS07780	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
SF31_RS07785	COG1053	succinate dehydrogenase
SF31_RS07790	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
SF31_RS07800	COG0567	Dehydrogenase, E1 component
SF31_RS07805	COG0508	dehydrogenase complex catalyzes the overall conversion of
SF31_RS07815	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
SF31_RS07820	COG2188	Transcriptional regulator
SF31_RS07825	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SF31_RS07825	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SF31_RS07825	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SF31_RS07830	COG0383	alpha-mannosidase activity
SF31_RS07840	COG1271	oxidase subunit
SF31_RS07845	COG1294	oxidase, subunit
SF31_RS07850	COG4890	Cyd operon protein YbgT
SF31_RS07855	COG3790	cyd operon protein YbgE
SF31_RS07860	COG0824	Thioesterase
SF31_RS07865	COG0811	peptide transport
SF31_RS07870	COG0848	biopolymer transport protein
SF31_RS07875	COG3064	Membrane
SF31_RS07885	COG2885	chlorophyll binding
SF31_RS07890	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
SF31_RS07935	COG3201	nicotinamide mononucleotide transporter
SF31_RS07940	COG1230	cation diffusion facilitator family transporter
SF31_RS07955	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
SF31_RS07965	COG2017	converts alpha-aldose to the beta-anomer
SF31_RS07975	COG1085	galactose-1-phosphate uridylyltransferase
SF31_RS07980	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
SF31_RS07985	COG1119	ATPase activity
SF31_RS07990	COG3585	molybdate ion transport
SF31_RS07990	COG2005	Transcriptional regulator
SF31_RS08000	COG0725	ABC transporter, periplasmic molybdate-binding protein
SF31_RS08005	COG4149	molybdate abc transporter
SF31_RS08010	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
SF31_RS08015	COG0561	phosphatase activity
SF31_RS08025	COG0583	DNA-binding transcription factor activity
SF31_RS08030	COG2828	Protein conserved in bacteria
SF31_RS08035	COG0471	metal ion transport
SF31_RS08040	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
SF31_RS08045	COG4677	pectinesterase activity
SF31_RS08050	COG1881	PFAM PEBP family protein
SF31_RS08055	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
SF31_RS08070	COG2226	methyltransferase
SF31_RS08075	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
SF31_RS08085	COG0391	Required for morphogenesis under gluconeogenic growth conditions
SF31_RS08100	COG0521	Mo-molybdopterin cofactor biosynthetic process
SF31_RS08110	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
SF31_RS08115	COG0314	molybdopterin synthase activity
SF31_RS08120	COG0670	Belongs to the BI1 family
SF31_RS08125	COG0670	Belongs to the BI1 family
SF31_RS08130	COG0392	lysyltransferase activity
SF31_RS08135	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
SF31_RS08140	COG3568	Endonuclease Exonuclease Phosphatase
SF31_RS08150	COG0842	Transport permease protein
SF31_RS08155	COG0842	Transport permease protein
SF31_RS08160	COG1131	(ABC) transporter
SF31_RS08170	COG1309	transcriptional regulator
SF31_RS08175	COG0513	Belongs to the DEAD box helicase family
SF31_RS08180	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
SF31_RS08185	COG1199	ATP-dependent helicase activity
SF31_RS08190	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
SF31_RS08195	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
SF31_RS08205	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
SF31_RS08215	COG4774	siderophore transport
SF31_RS08230	COG0668	transmembrane transport
SF31_RS08235	COG1126	abc transporter atp-binding protein
SF31_RS08240	COG0765	amino acid transport
SF31_RS08245	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SF31_RS08260	COG5006	permease, DMT superfamily
SF31_RS08265	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
SF31_RS08270	COG2194	sulfuric ester hydrolase activity
SF31_RS08280	COG1321	iron dependent repressor
SF31_RS08285	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
SF31_RS08290	COG1376	ErfK ybiS ycfS ynhG family protein
SF31_RS08295	COG0488	(ABC) transporter
SF31_RS08305	COG0561	phosphatase activity
SF31_RS08310	COG1882	Formate acetyltransferase
SF31_RS08315	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
SF31_RS08320	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
SF31_RS08325	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
SF31_RS08330	COG0303	'Molybdopterin
SF31_RS08335	COG1446	asparaginase
SF31_RS08340	COG4172	Belongs to the ABC transporter superfamily
SF31_RS08345	COG0747	negative chemotaxis
SF31_RS08355	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SF31_RS08360	COG2200	EAL domain
SF31_RS08365	COG2199	diguanylate cyclase activity
SF31_RS08380	COG2133	pyrroloquinoline quinone binding
SF31_RS08385	COG0625	glutathione transferase activity
SF31_RS08390	COG1686	Belongs to the peptidase S11 family
SF31_RS08395	COG1349	DNA-binding transcription factor activity
SF31_RS08400	COG0671	phosphoesterase, PA-phosphatase related
SF31_RS08405	COG2814	Major facilitator Superfamily
SF31_RS08415	COG0561	phosphatase activity
SF31_RS08420	COG0738	Major facilitator superfamily
SF31_RS08425	COG3226	Transcriptional regulator
SF31_RS08440	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
SF31_RS08450	COG0778	Nitroreductase
SF31_RS08470	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
SF31_RS08475	COG3842	ATPase activity
SF31_RS08480	COG1176	ABC-type spermidine putrescine transport system, permease component I
SF31_RS08485	COG1177	transmembrane transport
SF31_RS08500	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SF31_RS08505	COG4160	amino acid transport
SF31_RS08510	COG4215	(ABC) transporter
SF31_RS08515	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SF31_RS08520	COG1126	abc transporter atp-binding protein
SF31_RS08535	COG3023	N-Acetylmuramoyl-L-alanine amidase
SF31_RS08540	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
SF31_RS08545	COG0702	epimerase
SF31_RS08550	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
SF31_RS08555	COG0028	Belongs to the TPP enzyme family
SF31_RS08560	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
SF31_RS08570	COG2431	L-lysine efflux transmembrane transporter activity
SF31_RS08585	COG3593	DNA synthesis involved in DNA repair
SF31_RS08590	COG2990	Protein conserved in bacteria
SF31_RS08595	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
SF31_RS08600	COG0577	efflux transmembrane transporter activity
SF31_RS08600	COG1136	(ABC) transporter
SF31_RS08605	COG1278	Cold shock
SF31_RS08615	COG0542	response to heat
SF31_RS08635	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
SF31_RS08640	COG4988	ABC transporter
SF31_RS08645	COG0492	ferredoxin-NADP+ reductase activity
SF31_RS08650	COG1522	sequence-specific DNA binding
SF31_RS08655	COG1178	ABC-type Fe3 transport system permease component
SF31_RS08655	COG1674	ftsk spoiiie
SF31_RS08665	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
SF31_RS08675	COG0243	molybdopterin cofactor binding
SF31_RS08680	COG0437	4 iron, 4 sulfur cluster binding
SF31_RS08685	COG3302	dmso reductase anchor subunit
SF31_RS08690	COG1335	isochorismatase
SF31_RS08700	COG0531	amino acid
SF31_RS08705	COG0583	DNA-binding transcription factor activity
SF31_RS08710	COG2249	NAD(P)H dehydrogenase (quinone) activity
SF31_RS08715	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
SF31_RS08720	COG1882	Formate acetyltransferase
SF31_RS08725	COG2116	formate transmembrane transporter activity
SF31_RS08730	COG1944	ATP diphosphatase activity
SF31_RS08735	COG2323	membrane
SF31_RS08750	COG0501	Belongs to the peptidase M48B family
SF31_RS08760	COG0539	negative regulation of cytoplasmic translation
SF31_RS08770	COG0658	competence protein
SF31_RS08770	COG2333	competence protein COMEC
SF31_RS08775	COG1132	(ABC) transporter
SF31_RS08785	COG3214	Protein conserved in bacteria
SF31_RS08800	COG3173	Aminoglycoside phosphotransferase
SF31_RS08805	COG1434	Gram-negative-bacterium-type cell wall biogenesis
SF31_RS08810	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
SF31_RS08820	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
SF31_RS08830	COG2989	Protein conserved in bacteria
SF31_RS08835	COG3108	Peptidase M15
SF31_RS08840	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SF31_RS08845	COG1448	Aminotransferase
SF31_RS08870	COG0308	aminopeptidase N
SF31_RS08875	COG1116	anion transmembrane transporter activity
SF31_RS08880	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
SF31_RS08890	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
SF31_RS08895	COG0431	NADPH-dependent FMN reductase
SF31_RS08900	COG3539	Fimbrial protein
SF31_RS08905	COG3121	Chaperone
SF31_RS08910	COG3188	usher protein
SF31_RS08915	COG3539	Fimbrial protein
SF31_RS08920	COG3539	Fimbrial protein
SF31_RS08925	COG3539	Fimbrial protein
SF31_RS08930	COG3121	Chaperone
SF31_RS08945	COG0633	Ferredoxin
SF31_RS08945	COG3217	Mosc domain protein beta barrel domain protein
SF31_RS08955	COG0488	(ABC) transporter
SF31_RS08960	COG2995	paraquat-inducible protein a
SF31_RS08965	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
SF31_RS08965	COG3008	intermembrane lipid transfer
SF31_RS08970	COG3009	Protein conserved in bacteria
SF31_RS08975	COG3130	regulation of translation
SF31_RS08985	COG1067	ATP-dependent peptidase activity
SF31_RS08995	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
SF31_RS08995	COG2885	chlorophyll binding
SF31_RS09010	COG3070	regulator of competence-specific genes
SF31_RS09015	COG1289	transmembrane transporter activity
SF31_RS09020	COG3304	Inner membrane component domain
SF31_RS09025	COG0210	DNA helicase
SF31_RS09045	COG1832	CoA-binding protein
SF31_RS09060	COG1254	Belongs to the acylphosphatase family
SF31_RS09065	COG2920	part of a sulfur-relay system
SF31_RS09070	COG0670	Belongs to the BI1 family
SF31_RS09080	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
SF31_RS09085	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
SF31_RS09090	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
SF31_RS09095	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
SF31_RS09100	COG1999	signal sequence binding
SF31_RS09105	COG1773	rubredoxin
SF31_RS09110	COG1271	oxidase subunit
SF31_RS09115	COG1294	oxidase, subunit
SF31_RS09130	COG3206	protein involved in exopolysaccharide biosynthesis
SF31_RS09130	COG0489	protein tyrosine kinase activity
SF31_RS09135	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
SF31_RS09140	COG1596	polysaccharide export
SF31_RS09145	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
SF31_RS09170	COG1662	PFAM IS1 transposase
SF31_RS09175	COG1278	Cold shock
SF31_RS09180	COG1278	Cold shock
SF31_RS09195	COG0348	domain, Protein
SF31_RS09200	COG2205	protein histidine kinase activity
SF31_RS09200	COG0784	Response regulator, receiver
SF31_RS09200	COG2198	Histidine kinase
SF31_RS09205	COG1879	ABC-type sugar transport system periplasmic component
SF31_RS09210	COG0745	RESPONSE REGULATOR receiver
SF31_RS09215	COG3005	denitrification pathway
SF31_RS09220	COG0243	molybdopterin cofactor binding
SF31_RS09265	COG3729	General stress protein
SF31_RS09270	COG2233	PERMEase
SF31_RS09305	COG1309	transcriptional regulator
SF31_RS09310	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
SF31_RS09310	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
SF31_RS09310	COG0506	proline dehydrogenase activity
SF31_RS09320	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
SF31_RS09335	COG2822	iron ion transport
SF31_RS09340	COG2837	iron assimilation
SF31_RS09350	COG1702	phosphate starvation-inducible protein PhoH
SF31_RS09355	COG3658	cytochrome
SF31_RS09360	COG1215	transferase activity, transferring glycosyl groups
SF31_RS09365	COG1649	PFAM Uncharacterised BCR, COG1649
SF31_RS09365	COG0726	polysaccharide deacetylase
SF31_RS09370	COG0457	Tetratricopeptide repeat
SF31_RS09375	COG3706	GGDEF domain
SF31_RS09380	COG2801	Transposase and inactivated derivatives
SF31_RS09420	COG3381	protein complex oligomerization
SF31_RS09430	COG1462	curli production assembly transport component CsgG
SF31_RS09445	COG2197	response regulator
SF31_RS09475	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
SF31_RS09480	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
SF31_RS09505	COG2943	transferase activity, transferring hexosyl groups
SF31_RS09510	COG5645	(Lipo)protein
SF31_RS09530	COG1560	Kdo2-lipid A biosynthetic process
SF31_RS09540	COG2353	YceI-like domain
SF31_RS09545	COG3038	cytochrome b561
SF31_RS09580	COG2999	glutathione oxidoreductase activity
SF31_RS09590	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
SF31_RS09600	COG0673	inositol 2-dehydrogenase activity
SF31_RS09605	COG0728	peptidoglycan biosynthetic process
SF31_RS09610	COG3418	PFAM FlgN family protein
SF31_RS09615	COG2747	anti-sigma28 factor FlgM
SF31_RS09620	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
SF31_RS09625	COG1815	bacterial-type flagellum-dependent cell motility
SF31_RS09630	COG1558	bacterial-type flagellum-dependent cell motility
SF31_RS09635	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
SF31_RS09640	COG1749	Flagellar hook protein flgE
SF31_RS09645	COG4787	bacterial-type flagellum-dependent cell motility
SF31_RS09650	COG4786	Flagellar basal body rod
SF31_RS09665	COG1705	Flagellar rod assembly protein muramidase FlgJ
SF31_RS09665	COG3951	Flagellar rod assembly protein muramidase FlgJ
SF31_RS09670	COG1256	bacterial-type flagellum assembly
SF31_RS09675	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
SF31_RS09680	COG1530	ribonuclease E activity
SF31_RS09690	COG0564	pseudouridine synthase activity
SF31_RS09695	COG0424	maF-like protein
SF31_RS09700	COG1399	metal-binding, possibly nucleic acid-binding protein
SF31_RS09720	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
SF31_RS09725	COG1028	Short-chain dehydrogenase reductase Sdr
SF31_RS09735	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
SF31_RS09740	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
SF31_RS09745	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
SF31_RS09755	COG0470	DNA polymerase III
SF31_RS09760	COG0084	hydrolase, TatD family'
SF31_RS09765	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SF31_RS09765	COG1263	PTS System
SF31_RS09770	COG4773	Receptor
SF31_RS09775	COG0537	adenosine 5'-monophosphoramidase activity
SF31_RS09780	COG5633	Lipoprotein
SF31_RS09785	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
SF31_RS09805	COG1252	NADH dehydrogenase
SF31_RS09810	COG3134	Outer membrane lipoprotein
SF31_RS09815	COG1309	transcriptional regulator
SF31_RS09825	COG1376	ErfK ybiS ycfS ynhG family protein
SF31_RS09825	COG1388	LysM domain
SF31_RS09830	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
SF31_RS09835	COG4763	Acyl-transferase
SF31_RS09840	COG4591	ABC-type transport system involved in lipoprotein release permease component
SF31_RS09845	COG1136	(ABC) transporter
SF31_RS09850	COG4591	ABC-type transport system involved in lipoprotein release permease component
SF31_RS09860	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
SF31_RS09865	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
SF31_RS09875	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
SF31_RS09880	COG1177	transmembrane transport
SF31_RS09890	COG3842	ATPase activity
SF31_RS09905	COG2850	peptidyl-arginine hydroxylation
SF31_RS09910	COG2205	protein histidine kinase activity
SF31_RS09915	COG0745	RESPONSE REGULATOR receiver
SF31_RS09920	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
SF31_RS09940	COG1187	pseudouridine synthase activity
SF31_RS09945	COG0538	isocitrate dehydrogenase activity
SF31_RS09960	COG5562	phage envelope protein
SF31_RS09965	COG0789	Transcriptional regulator
SF31_RS09970	COG2200	EAL domain
SF31_RS09995	COG2200	EAL domain
SF31_RS10045	COG2894	cell division
SF31_RS10075	COG0179	Fumarylacetoacetate (FAA) hydrolase
SF31_RS10090	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
SF31_RS10095	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
SF31_RS10100	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
SF31_RS10115	COG2719	SpoVR family
SF31_RS10125	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
SF31_RS10135	COG1619	proteins homologs of microcin C7 resistance protein MccF
SF31_RS10145	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
SF31_RS10150	COG2261	transglycosylase associated protein
SF31_RS10165	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
SF31_RS10165	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
SF31_RS10165	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
SF31_RS10170	COG1461	Dihydroxyacetone kinase
SF31_RS10175	COG2376	Dihydroxyacetone kinase
SF31_RS10180	COG3284	Transcriptional regulator
SF31_RS10185	COG3468	outer membrane autotransporter barrel domain protein
SF31_RS10195	COG0012	GTP binding
SF31_RS10210	COG0659	secondary active sulfate transmembrane transporter activity
SF31_RS10215	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
SF31_RS10240	COG2890	protein-(glutamine-N5) methyltransferase activity
SF31_RS10245	COG3094	Invasion gene expression up-regulator, SirB
SF31_RS10250	COG2912	Transglutaminase-like superfamily
SF31_RS10270	COG0387	Pfam Sodium calcium exchanger
SF31_RS10275	COG4572	Cation transport regulator
SF31_RS10280	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
SF31_RS10285	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
SF31_RS10290	COG4932	domain protein
SF31_RS10295	COG2197	response regulator
SF31_RS10300	COG3850	Histidine kinase
SF31_RS10310	COG2223	nitrite transmembrane transporter activity
SF31_RS10315	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
SF31_RS10320	COG1140	nitrate reductase beta subunit
SF31_RS10325	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
SF31_RS10330	COG2181	nitrate reductase activity
SF31_RS10350	COG0788	formyltetrahydrofolate deformylase activity
SF31_RS10360	COG1752	Esterase of the alpha-beta hydrolase superfamily
SF31_RS10365	COG0745	RESPONSE REGULATOR receiver
SF31_RS10370	COG1210	Utp--glucose-1-phosphate uridylyltransferase
SF31_RS10380	COG1435	thymidine kinase activity
SF31_RS10395	COG1012	belongs to the aldehyde dehydrogenase family
SF31_RS10395	COG1454	alcohol dehydrogenase
SF31_RS10400	COG2095	MarC family integral membrane protein
SF31_RS10405	COG4166	transmembrane transport
SF31_RS10410	COG0601	transmembrane transport
SF31_RS10415	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SF31_RS10420	COG0444	Belongs to the ABC transporter superfamily
SF31_RS10425	COG4608	Belongs to the ABC transporter superfamily
SF31_RS10445	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
SF31_RS10450	COG2350	Protein conserved in bacteria
SF31_RS10455	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
SF31_RS10460	COG1607	acyl-coa hydrolase
SF31_RS10475	COG3047	cAMP biosynthetic process
SF31_RS10480	COG3685	Protein conserved in bacteria
SF31_RS10485	COG3685	Protein conserved in bacteria
SF31_RS10490	COG3729	General stress protein
SF31_RS10505	COG0135	phosphoribosylanthranilate isomerase activity
SF31_RS10505	COG0134	indole-3-glycerol-phosphate synthase activity
SF31_RS10510	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
SF31_RS10510	COG0512	Glutamine amidotransferase of anthranilate synthase
SF31_RS10515	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
SF31_RS10520	COG0613	PHP domain protein
SF31_RS10525	COG0009	L-threonylcarbamoyladenylate synthase
SF31_RS10530	COG4907	membrane protein (DUF2207)
SF31_RS10535	COG1187	pseudouridine synthase activity
SF31_RS10540	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
SF31_RS10545	COG1028	Short-chain dehydrogenase reductase Sdr
SF31_RS10555	COG0616	signal peptide processing
SF31_RS10570	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
SF31_RS10575	COG0583	DNA-binding transcription factor activity
SF31_RS10595	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
SF31_RS10605	COG0671	phosphoesterase, PA-phosphatase related
SF31_RS10610	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
SF31_RS10615	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
SF31_RS10625	COG0023	Translation Initiation Factor
SF31_RS10635	COG1349	DNA-binding transcription factor activity
SF31_RS10645	COG5001	Diguanylate cyclase
SF31_RS10660	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
SF31_RS10660	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
SF31_RS10665	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
SF31_RS10670	COG2852	Protein conserved in bacteria
SF31_RS10675	COG4172	Belongs to the ABC transporter superfamily
SF31_RS10680	COG4172	Belongs to the ABC transporter superfamily
SF31_RS10685	COG4171	peptide transport system, permease
SF31_RS10690	COG4168	peptide transport system, permease
SF31_RS10695	COG4166	transmembrane transport
SF31_RS10710	COG0531	amino acid
SF31_RS10715	COG0174	glutamine synthetase
SF31_RS10720	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
SF31_RS10725	COG1396	sequence-specific DNA binding
SF31_RS10725	COG1917	Cupin 2, conserved barrel domain protein
SF31_RS10730	COG1012	belongs to the aldehyde dehydrogenase family
SF31_RS10735	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
SF31_RS10740	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
SF31_RS10745	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
SF31_RS10750	COG1842	Phage shock protein A
SF31_RS10760	COG1983	PspC domain protein
SF31_RS10770	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
SF31_RS10775	COG0366	Alpha amylase catalytic
SF31_RS10780	COG1653	transport
SF31_RS10785	COG1175	transmembrane transport
SF31_RS10790	COG0395	ABC-type sugar transport system, permease component
SF31_RS10795	COG1063	alcohol dehydrogenase
SF31_RS10800	COG1082	Xylose isomerase domain protein TIM barrel
SF31_RS10805	COG0673	inositol 2-dehydrogenase activity
SF31_RS10810	COG1554	hydrolase, family 65, central catalytic
SF31_RS10815	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
SF31_RS10830	COG1609	Transcriptional regulator
SF31_RS10835	COG3106	COG3106 Predicted ATPase
SF31_RS10845	COG3283	Transcriptional regulator of aromatic amino acids metabolism
SF31_RS10850	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
SF31_RS10855	COG4948	Mandelate Racemase Muconate Lactonizing
SF31_RS10860	COG2866	Carboxypeptidase
SF31_RS10865	COG0702	epimerase
SF31_RS10870	COG1073	alpha beta
SF31_RS10875	COG0583	DNA-binding transcription factor activity
SF31_RS10885	COG4166	transmembrane transport
SF31_RS10890	COG0668	transmembrane transport
SF31_RS10900	COG3182	Iron-regulated membrane protein
SF31_RS10905	COG0589	response to stress
SF31_RS10910	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
SF31_RS10915	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
SF31_RS10920	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
SF31_RS10930	COG1473	amidohydrolase
SF31_RS10935	COG1473	amidohydrolase
SF31_RS10940	COG0583	DNA-binding transcription factor activity
SF31_RS10950	COG2840	Smr protein MutS2
SF31_RS10955	COG3706	GGDEF domain
SF31_RS10970	COG0513	Belongs to the DEAD box helicase family
SF31_RS10980	COG0582	viral genome integration into host DNA
SF31_RS11000	COG3723	Recombinational DNA repair protein, rece pathway
SF31_RS11005	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
SF31_RS11035	COG4197	protein conserved in bacteria, prophage-related
SF31_RS11045	COG3756	Protein conserved in bacteria
SF31_RS11050	COG1484	DNA-dependent DNA replication
SF31_RS11055	COG1846	Transcriptional regulator
SF31_RS11065	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
SF31_RS11070	COG1475	DNA binding
SF31_RS11085	COG1196	nuclear chromosome segregation
SF31_RS11095	COG3039	Transposase
SF31_RS11115	COG5301	cellulose 1,4-beta-cellobiosidase activity
SF31_RS11120	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
SF31_RS11125	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
SF31_RS11135	COG0589	response to stress
SF31_RS11140	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
SF31_RS11145	COG0674	pyruvate-flavodoxin oxidoreductase activity
SF31_RS11145	COG1013	pyruvate-flavodoxin oxidoreductase activity
SF31_RS11145	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SF31_RS11145	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
SF31_RS11150	COG3042	response to heat
SF31_RS11155	COG3187	Heat shock protein
SF31_RS11160	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
SF31_RS11165	COG2911	Protein conserved in bacteria
SF31_RS11175	COG3784	Protein of unknown function (DUF1318)
SF31_RS11180	COG2207	Transcriptional regulator
SF31_RS11185	COG1012	belongs to the aldehyde dehydrogenase family
SF31_RS11190	COG3733	amine oxidase
SF31_RS11195	COG1012	belongs to the aldehyde dehydrogenase family
SF31_RS11195	COG2030	dehydratase
SF31_RS11200	COG3396	Phenylacetate-CoA oxygenase
SF31_RS11205	COG3460	Phenylacetate-CoA oxygenase
SF31_RS11210	COG3396	Phenylacetate-CoA oxygenase
SF31_RS11215	COG2151	metal-sulfur cluster biosynthetic enzyme
SF31_RS11220	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
SF31_RS11225	COG1024	Enoyl-CoA hydratase
SF31_RS11230	COG1024	Enoyl-CoA hydratase
SF31_RS11235	COG1250	3-hydroxyacyl-CoA dehydrogenase
SF31_RS11240	COG2050	protein possibly involved in aromatic compounds catabolism
SF31_RS11245	COG0183	Belongs to the thiolase family
SF31_RS11250	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
SF31_RS11255	COG3327	negative regulation of DNA-templated transcription, initiation
SF31_RS11260	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
SF31_RS11280	COG2826	transposase and inactivated derivatives, IS30 family
SF31_RS11290	COG0667	Aldo Keto reductase
SF31_RS11300	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
SF31_RS11305	COG4589	Belongs to the CDS family
SF31_RS11310	COG2267	carboxylic ester hydrolase activity
SF31_RS11315	COG2453	phosphatase
SF31_RS11315	COG0671	phosphoesterase, PA-phosphatase related
SF31_RS11325	COG1643	Atp-dependent helicase
SF31_RS11330	COG1434	Gram-negative-bacterium-type cell wall biogenesis
SF31_RS11335	COG1012	belongs to the aldehyde dehydrogenase family
SF31_RS11340	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
SF31_RS11345	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
SF31_RS11350	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
SF31_RS11355	COG3038	cytochrome b561
SF31_RS11370	COG0840	transmembrane signaling receptor activity
SF31_RS11375	COG0583	DNA-binding transcription factor activity
SF31_RS11380	COG5383	Protein conserved in bacteria
SF31_RS11395	COG2841	Protein conserved in bacteria
SF31_RS11400	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
SF31_RS11405	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
SF31_RS11410	COG1275	C4-dicarboxylate transporter malic acid transport protein
SF31_RS11415	COG0500	methyltransferase
SF31_RS11435	COG0675	Transposase, IS605 OrfB family
SF31_RS11440	COG3135	benzoate transporter
SF31_RS11445	COG1396	sequence-specific DNA binding
SF31_RS11450	COG0826	peptidase U32
SF31_RS11460	COG1724	mRNA binding
SF31_RS11465	COG1598	PFAM Uncharacterised protein family UPF0150
SF31_RS11470	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
SF31_RS11475	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
SF31_RS11480	COG3842	ATPase activity
SF31_RS11485	COG1176	ABC-type spermidine putrescine transport system, permease component I
SF31_RS11490	COG1177	transmembrane transport
SF31_RS11515	COG3238	Protein conserved in bacteria
SF31_RS11520	COG1247	-acetyltransferase
SF31_RS11525	COG2130	NADP-dependent
SF31_RS11530	COG1802	Transcriptional regulator
SF31_RS11535	COG4772	TonB-dependent receptor
SF31_RS11540	COG3391	amine dehydrogenase activity
SF31_RS11545	COG1113	amino acid transport
SF31_RS11550	COG0625	glutathione transferase activity
SF31_RS11560	COG3209	COG3209 Rhs family protein
SF31_RS11570	COG5433	transposase activity
SF31_RS11575	COG5433	transposase activity
SF31_RS11585	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
SF31_RS11590	COG2162	N-hydroxyarylamine O-acetyltransferase activity
SF31_RS11595	COG0384	phenazine biosynthesis protein PhzF
SF31_RS11600	COG2181	nitrate reductase activity
SF31_RS11605	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
SF31_RS11610	COG1140	nitrate reductase beta subunit
SF31_RS11615	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
SF31_RS11620	COG2223	nitrite transmembrane transporter activity
SF31_RS11630	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
SF31_RS11635	COG0697	spore germination
SF31_RS11640	COG3383	formate dehydrogenase (NAD+) activity
SF31_RS11640	COG0243	molybdopterin cofactor binding
SF31_RS11645	COG3383	formate dehydrogenase (NAD+) activity
SF31_RS11645	COG0243	molybdopterin cofactor binding
SF31_RS11650	COG0437	4 iron, 4 sulfur cluster binding
SF31_RS11655	COG2864	formate dehydrogenase
SF31_RS11660	COG3093	addiction module antidote protein HigA
SF31_RS11665	COG1064	alcohol dehydrogenase
SF31_RS11685	COG1764	response to oxidative stress
SF31_RS11690	COG4608	Belongs to the ABC transporter superfamily
SF31_RS11695	COG0444	Belongs to the ABC transporter superfamily
SF31_RS11700	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SF31_RS11705	COG0601	transmembrane transport
SF31_RS11710	COG0747	negative chemotaxis
SF31_RS11715	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
SF31_RS11720	COG2202	Pas domain
SF31_RS11720	COG2199	diguanylate cyclase activity
SF31_RS11720	COG2200	EAL domain
SF31_RS11725	COG3706	GGDEF domain
SF31_RS11730	COG1649	PFAM Uncharacterised BCR, COG1649
SF31_RS11735	COG0531	amino acid
SF31_RS11740	COG0076	glutamate decarboxylase activity
SF31_RS11750	COG0612	Peptidase, M16
SF31_RS11755	COG4771	TonB-dependent receptor
SF31_RS11760	COG4178	(ABC) transporter
SF31_RS11765	COG0641	radical SAM
SF31_RS11770	COG3119	arylsulfatase activity
SF31_RS11775	COG2207	Transcriptional regulator
SF31_RS11785	COG0243	molybdopterin cofactor binding
SF31_RS11790	COG3539	Fimbrial protein
SF31_RS11795	COG3539	Fimbrial protein
SF31_RS11800	COG3539	Fimbrial protein
SF31_RS11805	COG3188	usher protein
SF31_RS11810	COG4977	sequence-specific DNA binding
SF31_RS11815	COG3550	peptidyl-serine autophosphorylation
SF31_RS11820	COG1396	sequence-specific DNA binding
SF31_RS11830	COG2911	Protein conserved in bacteria
SF31_RS11830	COG3210	domain, Protein
SF31_RS11880	COG3781	membrane
SF31_RS11895	COG2199	diguanylate cyclase activity
SF31_RS11905	COG2066	Belongs to the glutaminase family
SF31_RS11910	COG1012	belongs to the aldehyde dehydrogenase family
SF31_RS11915	COG0583	DNA-binding transcription factor activity
SF31_RS11935	COG1846	Transcriptional regulator
SF31_RS11940	COG4977	sequence-specific DNA binding
SF31_RS11950	COG0697	spore germination
SF31_RS11955	COG2814	Major facilitator Superfamily
SF31_RS11965	COG3706	GGDEF domain
SF31_RS11970	COG3111	PFAM Bacterial OB fold (BOF) protein
SF31_RS11975	COG1546	Belongs to the CinA family
SF31_RS11980	COG0339	signal peptide processing
SF31_RS11985	COG4221	oxidoreductase activity
SF31_RS11990	COG1802	Transcriptional regulator
SF31_RS12000	COG0246	Mannitol dehydrogenase
SF31_RS12005	COG0477	Major facilitator Superfamily
SF31_RS12015	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
SF31_RS12020	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
SF31_RS12025	COG5301	cellulose 1,4-beta-cellobiosidase activity
SF31_RS12030	COG4220	transposase activity
SF31_RS12040	COG5562	phage envelope protein
SF31_RS12055	COG1278	Cold shock
SF31_RS12065	COG3772	lysozyme
SF31_RS12080	COG1278	Cold shock
SF31_RS12085	COG1278	Cold shock
SF31_RS12090	COG0484	heat shock protein binding
SF31_RS12095	COG1403	HNH endonuclease
SF31_RS12115	COG2026	Addiction module toxin, RelE StbE family
SF31_RS12120	COG3077	Addiction module antitoxin, RelB DinJ family
SF31_RS12140	COG1396	sequence-specific DNA binding
SF31_RS12180	COG0582	viral genome integration into host DNA
SF31_RS12185	COG1063	alcohol dehydrogenase
SF31_RS12190	COG4948	Mandelate Racemase Muconate Lactonizing
SF31_RS12205	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
SF31_RS12220	COG0243	molybdopterin cofactor binding
SF31_RS12225	COG0243	molybdopterin cofactor binding
SF31_RS12230	COG0437	4 iron, 4 sulfur cluster binding
SF31_RS12235	COG3302	dmso reductase anchor subunit
SF31_RS12240	COG3381	protein complex oligomerization
SF31_RS12250	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
SF31_RS12255	COG1940	carbohydrate kinase activity
SF31_RS12260	COG0583	DNA-binding transcription factor activity
SF31_RS12265	COG2814	Major facilitator Superfamily
SF31_RS12280	COG3591	Belongs to the peptidase S1B family
SF31_RS12295	COG0628	permease
SF31_RS12300	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
SF31_RS12305	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
SF31_RS12315	COG0531	amino acid
SF31_RS12325	COG3136	membrane protein required for alginate biosynthesis
SF31_RS12330	COG0745	RESPONSE REGULATOR receiver
SF31_RS12335	COG2205	protein histidine kinase activity
SF31_RS12345	COG0114	fumarate hydratase activity
SF31_RS12350	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
SF31_RS12350	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
SF31_RS12355	COG1482	cell wall glycoprotein biosynthetic process
SF31_RS12360	COG5339	Protein conserved in bacteria
SF31_RS12370	COG2211	Major facilitator Superfamily
SF31_RS12375	COG3250	beta-galactosidase activity
SF31_RS12380	COG1309	transcriptional regulator
SF31_RS12385	COG1028	Short-chain dehydrogenase reductase Sdr
SF31_RS12390	COG1609	Transcriptional regulator
SF31_RS12395	COG1263	PTS System
SF31_RS12395	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SF31_RS12400	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
SF31_RS12410	COG0673	inositol 2-dehydrogenase activity
SF31_RS12450	COG4659	FMN binding
SF31_RS12460	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
SF31_RS12470	COG3104	oligopeptide transport
SF31_RS12475	COG0625	glutathione transferase activity
SF31_RS12480	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
SF31_RS12495	COG3895	Periplasmic Protein
SF31_RS12505	COG3133	Outer membrane lipoprotein
SF31_RS12520	COG1566	PFAM secretion protein HlyD family protein
SF31_RS12525	COG1289	transmembrane transporter activity
SF31_RS12530	COG2032	superoxide dismutase activity
SF31_RS12535	COG4989	oxidoreductase activity
SF31_RS12540	COG3313	Fe-S protein
SF31_RS12545	COG1309	transcriptional regulator
SF31_RS12550	COG1902	pentaerythritol trinitrate reductase activity
SF31_RS12555	COG0346	lactoylglutathione lyase activity
SF31_RS12560	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
SF31_RS12565	COG1201	RNA secondary structure unwinding
SF31_RS12570	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
SF31_RS12575	COG0791	NLP P60 protein
SF31_RS12580	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
SF31_RS12585	COG2814	Major facilitator Superfamily
SF31_RS12600	COG0583	DNA-binding transcription factor activity
SF31_RS12605	COG2814	Major facilitator Superfamily
SF31_RS12610	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
SF31_RS12615	COG0307	riboflavin synthase, alpha
SF31_RS12625	COG3468	outer membrane autotransporter barrel domain protein
SF31_RS12645	COG4529	Protein conserved in bacteria
SF31_RS12655	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
SF31_RS12660	COG0437	4 iron, 4 sulfur cluster binding
SF31_RS12670	COG2414	aldehyde ferredoxin oxidoreductase
SF31_RS12675	COG0437	4 iron, 4 sulfur cluster binding
SF31_RS12685	COG0469	pyruvate kinase activity
SF31_RS12690	COG4238	major outer membrane lipoprotein
SF31_RS12695	COG1376	ErfK ybiS ycfS ynhG family protein
SF31_RS12710	COG0719	Fe-S assembly protein
SF31_RS12715	COG0396	ATPase activity
SF31_RS12720	COG0719	Fe-S assembly protein
SF31_RS12725	COG0316	Belongs to the HesB IscA family
SF31_RS12735	COG2050	protein possibly involved in aromatic compounds catabolism
SF31_RS12740	COG0247	lactate metabolic process
SF31_RS12740	COG0277	FAD linked oxidase domain protein
SF31_RS12745	COG0628	permease
SF31_RS12755	COG0738	Major facilitator superfamily
SF31_RS12760	COG2271	Major facilitator Superfamily
SF31_RS12775	COG4670	ketone body catabolic process
SF31_RS12780	COG1960	acyl-CoA dehydrogenase activity
SF31_RS12785	COG2207	Transcriptional regulator
SF31_RS12785	COG1917	Cupin 2, conserved barrel domain protein
SF31_RS12795	COG2086	electron transfer activity
SF31_RS12800	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
SF31_RS12805	COG0644	oxidoreductase
SF31_RS12810	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
SF31_RS12815	COG0318	PFAM AMP-dependent synthetase and ligase
SF31_RS12820	COG0574	Belongs to the PEP-utilizing enzyme family
SF31_RS12820	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
SF31_RS12835	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
SF31_RS12840	COG4256	Hemin uptake protein
SF31_RS12850	COG2200	EAL domain
SF31_RS12855	COG0791	NLP P60 protein
SF31_RS12865	COG0386	Belongs to the glutathione peroxidase family
SF31_RS12880	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SF31_RS12880	COG0072	phenylalanine-tRNA ligase activity
SF31_RS12925	COG3137	Salt-induced outer membrane protein
SF31_RS12930	COG1105	Belongs to the carbohydrate kinase PfkB family
SF31_RS12940	COG3001	Fructosamine kinase
SF31_RS12950	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
SF31_RS12955	COG1988	membrane-bound metal-dependent
SF31_RS12960	COG1823	symporter activity
SF31_RS12975	COG0753	catalase activity
SF31_RS12985	COG1486	melibiose metabolic process
SF31_RS12990	COG1917	Cupin 2, conserved barrel domain protein
SF31_RS12990	COG2169	Transcriptional regulator
SF31_RS12995	COG1447	Phosphotransferase system cellobiose-specific component IIA
SF31_RS13000	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SF31_RS13005	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SF31_RS13010	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
SF31_RS13025	COG0322	excinuclease ABC activity
SF31_RS13035	COG3678	ATP-independent chaperone mediated protein folding
SF31_RS13065	COG0708	Exodeoxyribonuclease III
SF31_RS13070	COG0398	Pfam SNARE associated Golgi protein
SF31_RS13080	COG0398	Pfam SNARE associated Golgi protein
SF31_RS13085	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
SF31_RS13090	COG4134	Bacterial extracellular solute-binding protein
SF31_RS13095	COG4135	transport system, permease component
SF31_RS13100	COG4136	ATPase activity
SF31_RS13105	COG2897	thiosulfate sulfurtransferase activity
SF31_RS13110	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
SF31_RS13115	COG0494	nUDIX hydrolase
SF31_RS13125	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
SF31_RS13135	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
SF31_RS13150	COG0778	Nitroreductase
SF31_RS13160	COG0616	signal peptide processing
SF31_RS13165	COG0252	asparaginase activity
SF31_RS13170	COG1335	isochorismatase
SF31_RS13175	COG2814	Major facilitator Superfamily
SF31_RS13180	COG1349	DNA-binding transcription factor activity
SF31_RS13185	COG0667	Aldo Keto reductase
SF31_RS13190	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
SF31_RS13195	COG0191	fructose-bisphosphate aldolase activity
SF31_RS13200	COG1063	alcohol dehydrogenase
SF31_RS13205	COG2271	Major facilitator Superfamily
SF31_RS13210	COG1063	alcohol dehydrogenase
SF31_RS13215	COG3139	Protein of unknown function (DUF1315)
SF31_RS13225	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
SF31_RS13230	COG0676	glucose-6-phosphate 1-epimerase activity
SF31_RS13235	COG0656	L-ascorbic acid biosynthetic process
SF31_RS13240	COG3713	MltA-interacting MipA family protein
SF31_RS13245	COG2766	serine protein kinase
SF31_RS13255	COG2199	diguanylate cyclase activity
SF31_RS13260	COG2199	diguanylate cyclase activity
SF31_RS13265	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
SF31_RS13280	COG2207	Transcriptional regulator
SF31_RS13285	COG2807	transmembrane transport
SF31_RS13290	COG3189	MarR family transcriptional regulator
SF31_RS13295	COG3042	response to heat
SF31_RS13300	COG2199	diguanylate cyclase activity
SF31_RS13300	COG2203	Gaf domain
SF31_RS13310	COG2261	transglycosylase associated protein
SF31_RS13320	COG3615	Tellurite resistance protein tehB
SF31_RS13330	COG0583	DNA-binding transcription factor activity
SF31_RS13335	COG0473	3-isopropylmalate dehydrogenase activity
SF31_RS13340	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
SF31_RS13345	COG4638	Rieske (2fe-2S)
SF31_RS13350	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
SF31_RS13355	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
SF31_RS13360	COG0318	PFAM AMP-dependent synthetase and ligase
SF31_RS13365	COG3065	identical protein binding
SF31_RS13370	COG1214	PFAM Peptidase M22, glycoprotease
SF31_RS13375	COG1199	ATP-dependent helicase activity
SF31_RS13380	COG0251	oxidation-reduction process
SF31_RS13395	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
SF31_RS13405	COG1760	l-serine dehydratase
SF31_RS13410	COG2200	EAL domain
SF31_RS13415	COG1253	flavin adenine dinucleotide binding
SF31_RS13425	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
SF31_RS13425	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SF31_RS13430	COG3715	PTS system
SF31_RS13435	COG3716	PTS system mannose fructose sorbose family IID component
SF31_RS13455	COG2226	methyltransferase
SF31_RS13490	COG1414	Transcriptional regulator
SF31_RS13495	COG2814	Major facilitator Superfamily
SF31_RS13505	COG0793	Belongs to the peptidase S41A family
SF31_RS13515	COG1956	GAF domain-containing protein
SF31_RS13520	COG2995	paraquat-inducible protein a
SF31_RS13525	COG3008	intermembrane lipid transfer
SF31_RS13545	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
SF31_RS13560	COG1276	copper resistance
SF31_RS13565	COG2372	response to copper ion
SF31_RS13575	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
SF31_RS13580	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
SF31_RS13585	COG1770	oligopeptidase
SF31_RS13590	COG2979	Protein of unknown function (DUF533)
SF31_RS13605	COG3141	response to X-ray
SF31_RS13615	COG0800	Aldolase
SF31_RS13620	COG0129	dihydroxy-acid dehydratase activity
SF31_RS13625	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
SF31_RS13635	COG1737	Transcriptional regulator
SF31_RS13640	COG0469	pyruvate kinase activity
SF31_RS13645	COG1560	Kdo2-lipid A biosynthetic process
SF31_RS13650	COG0739	heme binding
SF31_RS13655	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
SF31_RS13665	COG1108	ABC-type Mn2 Zn2 transport systems permease components
SF31_RS13690	COG0217	transcriptional regulatory protein
SF31_RS13695	COG0494	nUDIX hydrolase
SF31_RS13705	COG1335	isochorismatase
SF31_RS13710	COG1801	Protein of unknown function DUF72
SF31_RS13715	COG3788	relative of glutathione S-transferase, MAPEG superfamily
SF31_RS13730	COG0243	molybdopterin cofactor binding
SF31_RS13735	COG3005	denitrification pathway
SF31_RS13745	COG3102	Protein conserved in bacteria
SF31_RS13755	COG3755	Protein conserved in bacteria
SF31_RS13765	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
SF31_RS13770	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
SF31_RS13775	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
SF31_RS13780	COG0745	RESPONSE REGULATOR receiver
SF31_RS13785	COG2201	protein-glutamate methylesterase activity
SF31_RS13790	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
SF31_RS13795	COG0840	transmembrane signaling receptor activity
SF31_RS13800	COG0840	transmembrane signaling receptor activity
SF31_RS13805	COG0835	chemotaxis
SF31_RS13810	COG2198	Histidine kinase
SF31_RS13810	COG0643	Histidine kinase
SF31_RS13815	COG1360	Flagellar Motor Protein
SF31_RS13820	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
SF31_RS13840	COG0589	response to stress
SF31_RS13850	COG1877	trehalose-phosphatase activity
SF31_RS13855	COG1172	Belongs to the binding-protein-dependent transport system permease family
SF31_RS13860	COG1129	ABC transporter
SF31_RS13865	COG1879	ABC-type sugar transport system periplasmic component
SF31_RS13870	COG1528	Iron-storage protein
SF31_RS13890	COG1528	Iron-storage protein
SF31_RS13900	COG0814	amino acid
SF31_RS13905	COG3318	Belongs to the UPF0149 family
SF31_RS13905	COG3012	SEC-C Motif Domain Protein
SF31_RS13935	COG2197	response regulator
SF31_RS13950	COG2197	response regulator
SF31_RS13955	COG1126	abc transporter atp-binding protein
SF31_RS13960	COG0765	amino acid transport
SF31_RS13970	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SF31_RS13980	COG1191	sigma factor activity
SF31_RS13985	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
SF31_RS13990	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
SF31_RS13995	COG1516	flagellar protein fliS
SF31_RS14005	COG0366	Alpha amylase catalytic
SF31_RS14015	COG2391	methyltransferase activity
SF31_RS14020	COG0425	Belongs to the sulfur carrier protein TusA family
SF31_RS14025	COG2135	peptidase activity
SF31_RS14030	COG0454	-acetyltransferase
SF31_RS14055	COG1766	The M ring may be actively involved in energy transduction
SF31_RS14060	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
SF31_RS14065	COG1317	bacterial-type flagellum organization
SF31_RS14070	COG1157	protein secretion by the type III secretion system
SF31_RS14075	COG2882	bacterial-type flagellum organization
SF31_RS14080	COG3144	bacterial-type flagellum assembly
SF31_RS14085	COG1580	Controls the rotational direction of flagella during chemotaxis
SF31_RS14090	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
SF31_RS14095	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
SF31_RS14100	COG3190	flagellar
SF31_RS14105	COG1338	Plays a role in the flagellum-specific transport system
SF31_RS14110	COG1987	bacterial-type flagellum assembly
SF31_RS14115	COG1684	flagellar biosynthetic protein fliR
SF31_RS14120	COG2197	response regulator
SF31_RS14140	COG3706	GGDEF domain
SF31_RS14145	COG5475	Uncharacterized small protein (DUF2158)
SF31_RS14150	COG2354	Protein conserved in bacteria
SF31_RS14155	COG0697	spore germination
SF31_RS14160	COG3727	T/G mismatch-specific endonuclease activity
SF31_RS14165	COG0270	DNA (cytosine-5-)-methyltransferase activity
SF31_RS14170	COG1418	mRNA catabolic process
SF31_RS14200	COG2205	protein histidine kinase activity
SF31_RS14205	COG0745	RESPONSE REGULATOR receiver
SF31_RS14210	COG2351	hydroxyisourate hydrolase activity
SF31_RS14225	COG3443	Belongs to the bacterial solute-binding protein 9 family
SF31_RS14230	COG3038	cytochrome b561
SF31_RS14255	COG1470	cell adhesion involved in biofilm formation
SF31_RS14255	COG1388	LysM domain
SF31_RS14265	COG0477	Major facilitator Superfamily
SF31_RS14270	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
SF31_RS14275	COG0217	transcriptional regulatory protein
SF31_RS14285	COG0534	Mate efflux family protein
SF31_RS14295	COG0583	DNA-binding transcription factor activity
SF31_RS14300	COG0583	DNA-binding transcription factor activity
SF31_RS14310	COG1376	ErfK ybiS ycfS ynhG family protein
SF31_RS14325	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
SF31_RS14335	COG3039	Transposase
SF31_RS14355	COG4771	TonB-dependent receptor
SF31_RS14365	COG3468	outer membrane autotransporter barrel domain protein
SF31_RS14375	COG2003	Belongs to the UPF0758 family
SF31_RS14415	COG1289	transmembrane transporter activity
SF31_RS14425	COG1686	Belongs to the peptidase S11 family
SF31_RS14430	COG2925	Exonuclease
SF31_RS14435	COG0425	Belongs to the sulfur carrier protein TusA family
SF31_RS14440	COG2391	methyltransferase activity
SF31_RS14445	COG0531	amino acid
SF31_RS14450	COG0583	DNA-binding transcription factor activity
SF31_RS14455	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
SF31_RS14460	COG4115	mRNA cleavage
SF31_RS14465	COG2161	toxin-antitoxin pair type II binding
SF31_RS14475	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
SF31_RS14485	COG0131	Imidazoleglycerol-phosphate dehydratase
SF31_RS14485	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
SF31_RS14490	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
SF31_RS14505	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
SF31_RS14505	COG0140	phosphoribosyl-ATP diphosphatase activity
SF31_RS14510	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
SF31_RS14515	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
SF31_RS14520	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
SF31_RS14535	COG0438	transferase activity, transferring glycosyl groups
SF31_RS14540	COG0110	maltose O-acetyltransferase activity
SF31_RS14545	COG0438	transferase activity, transferring glycosyl groups
SF31_RS14555	COG0562	UDP-galactopyranose mutase
SF31_RS14560	COG2244	polysaccharide biosynthetic process
SF31_RS14565	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
SF31_RS14570	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
SF31_RS14575	COG1091	dTDP-4-dehydrorhamnose reductase activity
SF31_RS14580	COG1088	dTDP-glucose 4,6-dehydratase activity
SF31_RS14585	COG1210	Utp--glucose-1-phosphate uridylyltransferase
SF31_RS14595	COG0438	transferase activity, transferring glycosyl groups
SF31_RS14600	COG2327	Polysaccharide pyruvyl transferase
SF31_RS14605	COG2244	polysaccharide biosynthetic process
SF31_RS14610	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
SF31_RS14615	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
SF31_RS14620	COG0662	Cupin 2, conserved barrel domain protein
SF31_RS14620	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
SF31_RS14625	COG0297	glycogen (starch) synthase activity
SF31_RS14630	COG1051	belongs to the nudix hydrolase family
SF31_RS14635	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
SF31_RS14640	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
SF31_RS14645	COG0110	maltose O-acetyltransferase activity
SF31_RS14650	COG1216	Glycosyl transferase, family 2
SF31_RS14660	COG0438	transferase activity, transferring glycosyl groups
SF31_RS14665	COG1045	serine acetyltransferase
SF31_RS14670	COG0463	Glycosyl transferase, family 2
SF31_RS14675	COG0489	protein tyrosine kinase activity
SF31_RS14675	COG3206	protein involved in exopolysaccharide biosynthesis
SF31_RS14680	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
SF31_RS14685	COG1596	polysaccharide export
SF31_RS14690	COG1253	flavin adenine dinucleotide binding
SF31_RS14695	COG2982	Protein involved in outer membrane biogenesis
SF31_RS14705	COG0572	uridine kinase
SF31_RS14710	COG5002	protein histidine kinase activity
SF31_RS14710	COG5001	Diguanylate cyclase
SF31_RS14710	COG3447	MASE1 domain protein
SF31_RS14715	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
SF31_RS14725	COG0443	Heat shock 70 kDa protein
SF31_RS14730	COG4248	protein with protein kinase and helix-hairpin-helix DNA-binding domains
SF31_RS14735	COG3779	Protein conserved in bacteria
SF31_RS14740	COG0631	protein serine/threonine phosphatase activity
SF31_RS14745	COG4245	von Willebrand factor, type A
SF31_RS14770	COG2205	protein histidine kinase activity
SF31_RS14775	COG0745	RESPONSE REGULATOR receiver
SF31_RS14780	COG3422	double-strand break repair
SF31_RS14785	COG0826	peptidase U32
SF31_RS14820	COG2801	Transposase and inactivated derivatives
SF31_RS14830	COG1063	alcohol dehydrogenase
SF31_RS14835	COG3775	system Galactitol-specific IIC component
SF31_RS14840	COG3414	Phosphotransferase system galactitol-specific IIB component
SF31_RS14845	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SF31_RS14860	COG1830	Aldolase
SF31_RS14865	COG2211	Major facilitator Superfamily
SF31_RS14870	COG1397	ADP-ribosylglycohydrolase
SF31_RS14875	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
SF31_RS14880	COG2188	Transcriptional regulator
SF31_RS14885	COG3757	hydrolase, family 25
SF31_RS14890	COG0351	phosphomethylpyrimidine kinase
SF31_RS14905	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
SF31_RS14910	COG5455	response to cobalt ion
SF31_RS14915	COG3539	Fimbrial protein
SF31_RS14920	COG3188	usher protein
SF31_RS14925	COG3121	Chaperone
SF31_RS14930	COG3539	Fimbrial protein
SF31_RS14945	COG0489	protein tyrosine kinase activity
SF31_RS14965	COG3831	ATPase activity
SF31_RS14975	COG0714	Associated with various cellular activities
SF31_RS14980	COG2425	protein containing a von Willebrand factor type A (vWA) domain
SF31_RS14985	COG3552	Protein containing von Willebrand factor type A (VWA) domain
SF31_RS14990	COG4715	Zinc finger, swim domain protein
SF31_RS14995	COG4808	Protein conserved in bacteria
SF31_RS15000	COG4807	Protein conserved in bacteria
SF31_RS15005	COG3279	Response regulator of the LytR AlgR family
SF31_RS15010	COG3275	phosphorelay sensor kinase activity
SF31_RS15015	COG0789	Transcriptional regulator
SF31_RS15025	COG1174	glycine betaine transport
SF31_RS15030	COG1125	glycine betaine transport
SF31_RS15035	COG1174	glycine betaine transport
SF31_RS15040	COG1732	Glycine betaine
SF31_RS15045	COG1472	Belongs to the glycosyl hydrolase 3 family
SF31_RS15050	COG0277	FAD linked oxidase domain protein
SF31_RS15055	COG1686	Belongs to the peptidase S11 family
SF31_RS15065	COG0586	Pfam SNARE associated Golgi protein
SF31_RS15070	COG1028	Short-chain dehydrogenase reductase Sdr
SF31_RS15085	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
SF31_RS15095	COG1346	cytolysis
SF31_RS15105	COG2949	membrane
SF31_RS15115	COG0493	'glutamate synthase
SF31_RS15120	COG0167	dihydroorotate dehydrogenase activity
SF31_RS15120	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
SF31_RS15125	COG4211	Belongs to the binding-protein-dependent transport system permease family
SF31_RS15130	COG1129	ABC transporter
SF31_RS15135	COG1879	ABC-type sugar transport system periplasmic component
SF31_RS15140	COG1609	Transcriptional regulator
SF31_RS15150	COG2311	Membrane
SF31_RS15170	COG4771	TonB-dependent receptor
SF31_RS15175	COG0833	amino acid
SF31_RS15180	COG0583	DNA-binding transcription factor activity
SF31_RS15185	COG2855	membrane
SF31_RS15195	COG1522	sequence-specific DNA binding
SF31_RS15195	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
SF31_RS15200	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
SF31_RS15210	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
SF31_RS15215	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
SF31_RS15220	COG2313	pseudouridylate synthase activity
SF31_RS15225	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
SF31_RS15230	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
SF31_RS15230	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SF31_RS15230	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SF31_RS15235	COG1105	Belongs to the carbohydrate kinase PfkB family
SF31_RS15240	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
SF31_RS15240	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
SF31_RS15245	COG2814	Major facilitator Superfamily
SF31_RS15260	COG0246	Mannitol dehydrogenase
SF31_RS15265	COG0523	cobalamin synthesis protein
SF31_RS15270	COG0671	phosphoesterase, PA-phosphatase related
SF31_RS15275	COG0791	NLP P60 protein
SF31_RS15280	COG2200	EAL domain
SF31_RS15285	COG4166	transmembrane transport
SF31_RS15290	COG4174	ABC transporter (Permease)
SF31_RS15295	COG4239	(ABC) transporter, permease
SF31_RS15300	COG4172	Belongs to the ABC transporter superfamily
SF31_RS15310	COG2814	Major facilitator Superfamily
SF31_RS15315	COG1187	pseudouridine synthase activity
SF31_RS15320	COG1061	Type III restriction enzyme res subunit
SF31_RS15340	COG3083	sulfuric ester hydrolase activity
SF31_RS15350	COG3468	outer membrane autotransporter barrel domain protein
SF31_RS15365	COG2197	response regulator
SF31_RS15370	COG3088	subunit of a heme lyase
SF31_RS15370	COG4235	cytochrome complex assembly
SF31_RS15375	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
SF31_RS15380	COG1138	Cytochrome C-type biogenesis protein
SF31_RS15390	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
SF31_RS15395	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
SF31_RS15400	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
SF31_RS15405	COG4133	protoheme IX ABC transporter activity
SF31_RS15410	COG3005	denitrification pathway
SF31_RS15415	COG3043	anaerobic respiration
SF31_RS15420	COG0348	domain, Protein
SF31_RS15425	COG0437	4 iron, 4 sulfur cluster binding
SF31_RS15435	COG3062	negative regulation of establishment of protein localization
SF31_RS15440	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
SF31_RS15440	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
SF31_RS15460	COG4615	Cyclic peptide transporter
SF31_RS15465	COG3145	DNA-N1-methyladenine dioxygenase activity
SF31_RS15470	COG2169	Transcriptional regulator
SF31_RS15470	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
SF31_RS15475	COG1477	protein flavinylation
SF31_RS15480	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
SF31_RS15495	COG2198	Histidine kinase
SF31_RS15495	COG0642	Histidine kinase
SF31_RS15500	COG2197	response regulator
SF31_RS15505	COG0784	Response regulator, receiver
SF31_RS15505	COG2205	protein histidine kinase activity
SF31_RS15510	COG3852	Histidine kinase
SF31_RS15515	COG2204	response regulator
SF31_RS15520	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
SF31_RS15525	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
SF31_RS15530	COG2031	fatty acid transporter
SF31_RS15535	COG0183	Belongs to the thiolase family
SF31_RS15540	COG4676	Protein conserved in bacteria
SF31_RS15545	COG5445	Predicted secreted protein (DUF2300)
SF31_RS15550	COG2373	Large extracellular alpha-helical protein
SF31_RS15560	COG3234	Protein of unknown function (DUF1175)
SF31_RS15565	COG4685	Uncharacterized protein conserved in bacteria (DUF2138)
SF31_RS15570	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
SF31_RS15580	COG3468	outer membrane autotransporter barrel domain protein
SF31_RS15590	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SF31_RS15595	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SF31_RS15600	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
SF31_RS15605	COG3642	lipopolysaccharide core region biosynthetic process
SF31_RS15610	COG0583	DNA-binding transcription factor activity
SF31_RS15615	COG0584	glycerophosphoryl diester phosphodiesterase
SF31_RS15620	COG2271	Major facilitator Superfamily
SF31_RS15625	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
SF31_RS15635	COG0247	lactate metabolic process
SF31_RS15640	COG5464	transposase or invertase
SF31_RS15655	COG2271	Major facilitator Superfamily
SF31_RS15665	COG1414	Transcriptional regulator
SF31_RS15730	COG0318	PFAM AMP-dependent synthetase and ligase
SF31_RS15740	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
SF31_RS15755	COG1169	isochorismate synthase
SF31_RS15760	COG4575	ribosome binding
SF31_RS15765	COG2153	protein acetylation
SF31_RS15775	COG5160	protein modification by small protein removal
SF31_RS15780	COG2304	oxidoreductase activity
SF31_RS15785	COG2234	aminopeptidase activity
SF31_RS15805	COG0457	Tetratricopeptide repeat
SF31_RS15815	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SF31_RS15820	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
SF31_RS15830	COG0839	Belongs to the complex I subunit 6 family
SF31_RS15845	COG1034	ATP synthesis coupled electron transport
SF31_RS15850	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
SF31_RS15855	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
SF31_RS15875	COG0583	DNA-binding transcription factor activity
SF31_RS15880	COG0436	Aminotransferase
SF31_RS15890	COG0490	domain, Protein
SF31_RS15890	COG0471	metal ion transport
SF31_RS15895	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
SF31_RS15915	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
SF31_RS15920	COG0280	phosphate acetyltransferase
SF31_RS15920	COG0857	belongs to the CobB CobQ family
SF31_RS15925	COG1288	antiporter activity
SF31_RS15930	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
SF31_RS15935	COG0622	Phosphoesterase
SF31_RS15940	COG0625	glutathione transferase activity
SF31_RS15945	COG0625	glutathione transferase activity
SF31_RS15950	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
SF31_RS15955	COG1090	epimerase
SF31_RS15960	COG5464	transposase or invertase
SF31_RS15965	COG4598	ABC transporter
SF31_RS15970	COG4160	amino acid transport
SF31_RS15975	COG4215	(ABC) transporter
SF31_RS15980	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SF31_RS15985	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SF31_RS15990	COG0163	prenyltransferase activity
SF31_RS15995	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
SF31_RS16000	COG1286	toxin biosynthetic process
SF31_RS16005	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
SF31_RS16010	COG0285	dihydrofolate synthase activity
SF31_RS16020	COG0586	Pfam SNARE associated Golgi protein
SF31_RS16030	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
SF31_RS16045	COG2814	Major facilitator Superfamily
SF31_RS16050	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
SF31_RS16065	COG3101	peptidyl-lysine hydroxylation
SF31_RS16070	COG0730	response to heat
SF31_RS16085	COG2890	protein-(glutamine-N5) methyltransferase activity
SF31_RS16100	COG3539	Fimbrial protein
SF31_RS16105	COG3539	Fimbrial protein
SF31_RS16110	COG3539	Fimbrial protein
SF31_RS16115	COG3121	Chaperone
SF31_RS16125	COG3539	Fimbrial protein
SF31_RS16130	COG2062	phosphohistidine phosphatase, SixA
SF31_RS16145	COG3691	Protein conserved in bacteria
SF31_RS16150	COG2067	long-chain fatty acid transport protein
SF31_RS16160	COG2853	Lipoprotein
SF31_RS16165	COG2116	formate transmembrane transporter activity
SF31_RS16175	COG0582	viral genome integration into host DNA
SF31_RS16180	COG2246	polysaccharide biosynthetic process
SF31_RS16185	COG0463	Glycosyl transferase, family 2
SF31_RS16210	COG4725	Belongs to the MT-A70-like family
SF31_RS16220	COG1846	Transcriptional regulator
SF31_RS16230	COG5532	Uncharacterized conserved protein (DUF2303)
SF31_RS16235	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
SF31_RS16255	COG0583	DNA-binding transcription factor activity
SF31_RS16260	COG2610	gluconate transmembrane transporter activity
SF31_RS16270	COG0477	Major facilitator Superfamily
SF31_RS16275	COG1566	PFAM secretion protein HlyD family protein
SF31_RS16280	COG2197	response regulator
SF31_RS16285	COG0784	Response regulator, receiver
SF31_RS16285	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SF31_RS16285	COG2198	Histidine kinase
SF31_RS16285	COG2205	protein histidine kinase activity
SF31_RS16290	COG1804	L-carnitine dehydratase bile acid-inducible protein F
SF31_RS16295	COG0679	Auxin Efflux Carrier
SF31_RS16300	COG0028	Belongs to the TPP enzyme family
SF31_RS16330	COG1560	Kdo2-lipid A biosynthetic process
SF31_RS16335	COG0436	Aminotransferase
SF31_RS16340	COG3275	phosphorelay sensor kinase activity
SF31_RS16345	COG3279	Response regulator of the LytR AlgR family
SF31_RS16350	COG2207	Transcriptional regulator
SF31_RS16355	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SF31_RS16355	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
SF31_RS16355	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
SF31_RS16360	COG1363	Peptidase, m42
SF31_RS16365	COG0006	proline dipeptidase activity
SF31_RS16370	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SF31_RS16375	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SF31_RS16405	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
SF31_RS16410	COG3385	transposase activity
SF31_RS16415	COG2200	EAL domain
SF31_RS16415	COG2199	diguanylate cyclase activity
SF31_RS16430	COG3415	Transposase
SF31_RS16435	COG3415	Transposase
SF31_RS16465	COG0583	DNA-binding transcription factor activity
SF31_RS16475	COG2211	Major facilitator Superfamily
SF31_RS16480	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
SF31_RS16490	COG0583	DNA-binding transcription factor activity
SF31_RS16495	COG0385	Bile acid
SF31_RS16500	COG3530	Putative quorum-sensing-regulated virulence factor
SF31_RS16520	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
SF31_RS16525	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
SF31_RS16530	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
SF31_RS16535	COG2190	(PTS) system
SF31_RS16540	COG3385	transposase activity
SF31_RS16555	COG4884	unkown
SF31_RS16555	COG3831	ATPase activity
SF31_RS16560	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
SF31_RS16565	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
SF31_RS16570	COG4208	sulfate ABC transporter
SF31_RS16575	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
SF31_RS16580	COG4150	thiosulfate binding
SF31_RS16585	COG1028	Short-chain dehydrogenase reductase Sdr
SF31_RS16600	COG1263	PTS System
SF31_RS16600	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SF31_RS16605	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
SF31_RS16610	COG2837	iron assimilation
SF31_RS16625	COG0456	acetyltransferase
SF31_RS16630	COG0860	N-Acetylmuramoyl-L-alanine amidase
SF31_RS16640	COG2207	Transcriptional regulator
SF31_RS16645	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
SF31_RS16650	COG4816	utilization protein
SF31_RS16660	COG4303	Ethanolamine ammonia lyase large subunit
SF31_RS16665	COG0582	viral genome integration into host DNA
SF31_RS16710	COG4819	ethanolamine utilization protein
SF31_RS16715	COG3192	ethanolamine utilization protein
SF31_RS16720	COG1454	alcohol dehydrogenase
SF31_RS16725	COG4820	ethanolamine utilization protein (EutJ)
SF31_RS16730	COG1012	belongs to the aldehyde dehydrogenase family
SF31_RS16735	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
SF31_RS16740	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
SF31_RS16745	COG0280	phosphate acetyltransferase
SF31_RS16750	COG4812	Cobalamin adenosyltransferase
SF31_RS16755	COG4766	ethanolamine catabolic process
SF31_RS16760	COG4917	ethanolamine utilization protein
SF31_RS16765	COG4810	utilization protein
SF31_RS16770	COG0281	malic enzyme
SF31_RS16770	COG0280	phosphate acetyltransferase
SF31_RS16775	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
SF31_RS16780	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
SF31_RS16785	COG5342	invasion associated locus B
SF31_RS16795	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
SF31_RS16795	COG0493	'glutamate synthase
SF31_RS16800	COG3850	Histidine kinase
SF31_RS16805	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
SF31_RS16815	COG1393	Belongs to the ArsC family
SF31_RS16830	COG0400	carboxylic ester hydrolase activity
SF31_RS16835	COG1444	tRNA N-acetyltransferase activity
SF31_RS16840	COG2321	neutral zinc metallopeptidase
SF31_RS16855	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
SF31_RS16865	COG2716	regulation of RNA biosynthetic process
SF31_RS16870	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
SF31_RS16875	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
SF31_RS16880	COG0651	ATP synthesis coupled electron transport
SF31_RS16885	COG0650	Formate hydrogenlyase subunit 4
SF31_RS16890	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
SF31_RS16895	COG4237	Hydrogenase 4 membrane
SF31_RS16900	COG0651	ATP synthesis coupled electron transport
SF31_RS16905	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
SF31_RS16905	COG3261	NADH dehydrogenase
SF31_RS16910	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SF31_RS16915	COG3260	NADH ubiquinone oxidoreductase 20
SF31_RS16925	COG3604	Transcriptional regulator
SF31_RS16930	COG2116	formate transmembrane transporter activity
SF31_RS16935	COG0628	permease
SF31_RS16940	COG4783	chaperone-mediated protein folding
SF31_RS16945	COG1393	Belongs to the ArsC family
SF31_RS16955	COG2233	PERMEase
SF31_RS16970	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
SF31_RS16975	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
SF31_RS16980	COG0248	Ppx GppA phosphatase
SF31_RS16985	COG2200	EAL domain
SF31_RS17000	COG3133	Outer membrane lipoprotein
SF31_RS17015	COG0517	IMP dehydrogenase activity
SF31_RS17015	COG0516	GMP reductase activity
SF31_RS17025	COG1645	bacterial-type flagellum-dependent swarming motility
SF31_RS17035	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
SF31_RS17040	COG2976	Protein conserved in bacteria
SF31_RS17070	COG4953	penicillin-binding protein 1C
SF31_RS17075	COG2373	Large extracellular alpha-helical protein
SF31_RS17080	COG2897	thiosulfate sulfurtransferase activity
SF31_RS17095	COG2975	iron-sulfur cluster assembly
SF31_RS17100	COG0633	Ferredoxin
SF31_RS17120	COG0822	iron-sulfur transferase activity
SF31_RS17140	COG0483	inositol monophosphate 1-phosphatase activity
SF31_RS17145	COG1073	alpha beta
SF31_RS17150	COG3711	transcriptional antiterminator
SF31_RS17155	COG2814	Major facilitator Superfamily
SF31_RS17160	COG0583	DNA-binding transcription factor activity
SF31_RS17165	COG4638	Rieske (2fe-2S)
SF31_RS17190	COG2259	Doxx family
SF31_RS17195	COG2017	converts alpha-aldose to the beta-anomer
SF31_RS17200	COG1063	alcohol dehydrogenase
SF31_RS17205	COG1172	Belongs to the binding-protein-dependent transport system permease family
SF31_RS17210	COG1129	ABC transporter
SF31_RS17215	COG1879	ABC-type sugar transport system periplasmic component
SF31_RS17220	COG0457	Tetratricopeptide repeat
SF31_RS17225	COG1940	carbohydrate kinase activity
SF31_RS17235	COG1017	nitric oxide dioxygenase activity
SF31_RS17235	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
SF31_RS17240	COG0347	Belongs to the P(II) protein family
SF31_RS17245	COG2204	response regulator
SF31_RS17250	COG3170	Tfp pilus assembly protein FimV
SF31_RS17255	COG2205	protein histidine kinase activity
SF31_RS17260	COG0047	phosphoribosylformylglycinamidine synthase activity
SF31_RS17260	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
SF31_RS17275	COG0560	Phosphoserine phosphatase
SF31_RS17280	COG1737	Transcriptional regulator
SF31_RS17285	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
SF31_RS17310	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
SF31_RS17330	COG0681	Belongs to the peptidase S26 family
SF31_RS17340	COG3086	response to oxidative stress
SF31_RS17345	COG3026	antisigma factor binding
SF31_RS17350	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
SF31_RS17355	COG1595	DNA-templated transcription, initiation
SF31_RS17365	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
SF31_RS17375	COG0513	Belongs to the DEAD box helicase family
SF31_RS17385	COG0583	DNA-binding transcription factor activity
SF31_RS17405	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
SF31_RS17415	COG3118	belongs to the thioredoxin family
SF31_RS17420	COG3148	PFAM DTW domain containing protein
SF31_RS17425	COG1042	CoA-binding domain protein
SF31_RS17425	COG0045	succinate-CoA ligase (ADP-forming) activity
SF31_RS17425	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
SF31_RS17430	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
SF31_RS17435	COG5544	Lipoprotein
SF31_RS17440	COG0477	Major facilitator Superfamily
SF31_RS17470	COG0542	response to heat
SF31_RS17475	COG1496	oxidoreductase activity
SF31_RS17480	COG0564	pseudouridine synthase activity
SF31_RS17485	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
SF31_RS17495	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
SF31_RS17500	COG0077	Prephenate dehydratase
SF31_RS17500	COG1605	Chorismate mutase
SF31_RS17505	COG0287	Prephenate dehydrogenase
SF31_RS17505	COG1605	Chorismate mutase
SF31_RS17510	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
SF31_RS17525	COG2199	diguanylate cyclase activity
SF31_RS17530	COG2885	chlorophyll binding
SF31_RS17555	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
SF31_RS17560	COG4137	Cytochrome C assembly protein
SF31_RS17565	COG4536	flavin adenine dinucleotide binding
SF31_RS17585	COG0497	DNA recombination
SF31_RS17590	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
SF31_RS17600	COG2867	negative regulation of translational initiation
SF31_RS17610	COG0582	viral genome integration into host DNA
SF31_RS17620	COG3311	Transcriptional regulator
SF31_RS17625	COG4983	Phage plasmid primase, P4 family domain protein
SF31_RS17635	COG1204	response to ionizing radiation
SF31_RS17645	COG1479	Protein of unknown function DUF262
SF31_RS17660	COG3596	GTP binding
SF31_RS17670	COG2378	regulation of single-species biofilm formation
SF31_RS17710	COG2003	Belongs to the UPF0758 family
SF31_RS17725	COG3468	outer membrane autotransporter barrel domain protein
SF31_RS17760	COG0366	Alpha amylase catalytic
SF31_RS17765	COG0366	Alpha amylase catalytic
SF31_RS17770	COG0366	Alpha amylase catalytic
SF31_RS17780	COG0579	oxidoreductase
SF31_RS17785	COG1012	belongs to the aldehyde dehydrogenase family
SF31_RS17790	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
SF31_RS17795	COG1113	amino acid transport
SF31_RS17800	COG1802	Transcriptional regulator
SF31_RS17805	COG1652	LysM domain
SF31_RS17810	COG0401	homolog of Blt101
SF31_RS17815	COG0640	Transcriptional regulator
SF31_RS17820	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
SF31_RS17825	COG2916	Histone family protein nucleoid-structuring protein H-NS
SF31_RS17840	COG4575	ribosome binding
SF31_RS17845	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
SF31_RS17855	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SF31_RS17860	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SF31_RS17865	COG4175	Glycine betaine
SF31_RS17870	COG4176	ABC-type proline glycine betaine transport system permease component
SF31_RS17875	COG2113	Glycine betaine
SF31_RS17885	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
SF31_RS17895	COG1846	Transcriptional regulator
SF31_RS17900	COG1566	PFAM secretion protein HlyD family protein
SF31_RS17905	COG2814	Major facilitator Superfamily
SF31_RS17920	COG1238	metal cluster binding
SF31_RS17925	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
SF31_RS17960	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
SF31_RS17980	COG1546	Belongs to the CinA family
SF31_RS17985	COG2951	lytic endotransglycosylase activity
SF31_RS17990	COG3730	PTS system glucitol sorbitol-specific
SF31_RS17995	COG3732	PTS system glucitol sorbitol-specific
SF31_RS18000	COG3731	PTS system glucitol sorbitol-specific IIA component
SF31_RS18005	COG1028	Short-chain dehydrogenase reductase Sdr
SF31_RS18010	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
SF31_RS18015	COG1349	DNA-binding transcription factor activity
SF31_RS18020	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
SF31_RS18020	COG0517	IMP dehydrogenase activity
SF31_RS18040	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
SF31_RS18045	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
SF31_RS18050	COG1609	Transcriptional regulator
SF31_RS18055	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SF31_RS18055	COG1263	PTS System
SF31_RS18060	COG2723	6-phospho-beta-galactosidase activity
SF31_RS18065	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
SF31_RS18075	COG3260	NADH ubiquinone oxidoreductase 20
SF31_RS18080	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SF31_RS18085	COG3261	NADH dehydrogenase
SF31_RS18085	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
SF31_RS18090	COG0650	Formate hydrogenlyase subunit 4
SF31_RS18095	COG0651	ATP synthesis coupled electron transport
SF31_RS18100	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
SF31_RS18115	COG0375	protein maturation
SF31_RS18120	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
SF31_RS18125	COG0298	carbon dioxide binding
SF31_RS18130	COG0409	Hydrogenase expression formation protein
SF31_RS18135	COG0309	Hydrogenase expression formation protein (HypE)
SF31_RS18140	COG3604	Transcriptional regulator
SF31_RS18155	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
SF31_RS18160	COG1349	DNA-binding transcription factor activity
SF31_RS18165	COG2084	Dehydrogenase
SF31_RS18170	COG3395	kinase activity
SF31_RS18175	COG0235	Class ii aldolase
SF31_RS18180	COG3622	Belongs to the hyi family
SF31_RS18185	COG2610	gluconate transmembrane transporter activity
SF31_RS18190	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
SF31_RS18195	COG1388	LysM domain
SF31_RS18195	COG4942	peptidase
SF31_RS18250	COG2234	aminopeptidase activity
SF31_RS18255	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
SF31_RS18260	COG1518	maintenance of DNA repeat elements
SF31_RS18275	COG1857	crispr-associated protein
SF31_RS18290	COG1203	CRISPR-associated helicase, Cas3
SF31_RS18305	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
SF31_RS18310	COG0720	synthase
SF31_RS18315	COG0644	oxidoreductase
SF31_RS18320	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
SF31_RS18325	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
SF31_RS18330	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
SF31_RS18335	COG2086	electron transfer activity
SF31_RS18340	COG0477	Major facilitator Superfamily
SF31_RS18345	COG0277	FAD linked oxidase domain protein
SF31_RS18350	COG1028	Short-chain dehydrogenase reductase Sdr
SF31_RS18355	COG2223	nitrite transmembrane transporter activity
SF31_RS18360	COG1070	Carbohydrate kinase
SF31_RS18365	COG0602	queuosine metabolic process
SF31_RS18375	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
SF31_RS18390	COG3956	TIGRFAM MazG family protein
SF31_RS18395	COG2337	Toxic component of a toxin-antitoxin (TA) module
SF31_RS18400	COG2336	PFAM SpoVT AbrB
SF31_RS18405	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
SF31_RS18420	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
SF31_RS18425	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
SF31_RS18430	COG4999	Histidine kinase
SF31_RS18430	COG3850	Histidine kinase
SF31_RS18430	COG3437	response regulator, receiver
SF31_RS18430	COG2205	protein histidine kinase activity
SF31_RS18435	COG4948	Mandelate Racemase Muconate Lactonizing
SF31_RS18440	COG4948	Mandelate Racemase Muconate Lactonizing
SF31_RS18445	COG2271	Major facilitator Superfamily
SF31_RS18450	COG0716	FMN binding
SF31_RS18455	COG0564	pseudouridine synthase activity
SF31_RS18460	COG3098	single-species biofilm formation
SF31_RS18480	COG1611	Belongs to the LOG family
SF31_RS18485	COG0814	amino acid
SF31_RS18490	COG1760	l-serine dehydratase
SF31_RS18500	COG1454	alcohol dehydrogenase
SF31_RS18505	COG0235	Class ii aldolase
SF31_RS18510	COG0738	Major facilitator superfamily
SF31_RS18520	COG1070	Carbohydrate kinase
SF31_RS18530	COG1349	DNA-binding transcription factor activity
SF31_RS18540	COG2363	Small membrane protein
SF31_RS18545	COG0583	DNA-binding transcription factor activity
SF31_RS18555	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
SF31_RS18560	COG2166	iron-sulfur cluster assembly
SF31_RS18565	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
SF31_RS18570	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
SF31_RS18590	COG0860	N-Acetylmuramoyl-L-alanine amidase
SF31_RS18595	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
SF31_RS18595	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
SF31_RS18600	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
SF31_RS18605	COG1074	ATP-dependent DNA helicase activity
SF31_RS18610	COG1025	Belongs to the peptidase M16 family
SF31_RS18615	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
SF31_RS18620	COG4967	type IV pilus modification protein PilV
SF31_RS18630	COG4795	General secretion pathway protein
SF31_RS18635	COG2165	general secretion pathway protein
SF31_RS18650	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
SF31_RS18675	COG0861	Integral membrane protein TerC family
SF31_RS18685	COG0667	Aldo Keto reductase
SF31_RS18700	COG1609	Transcriptional regulator
SF31_RS18710	COG0583	DNA-binding transcription factor activity
SF31_RS18715	COG1794	racemase activity, acting on amino acids and derivatives
SF31_RS18720	COG2814	Major facilitator Superfamily
SF31_RS18725	COG1028	Short-chain dehydrogenase reductase Sdr
SF31_RS18735	COG0183	Belongs to the thiolase family
SF31_RS18740	COG0814	amino acid
SF31_RS18745	COG2771	luxR family
SF31_RS18750	COG3710	Transcriptional regulator
SF31_RS18770	COG0457	Tetratricopeptide repeat
SF31_RS18775	COG3710	Transcriptional regulator
SF31_RS18775	COG0457	Tetratricopeptide repeat
SF31_RS18790	COG2197	response regulator
SF31_RS18795	COG2197	response regulator
SF31_RS18825	COG3387	PFAM Glycoside hydrolase 15-related
SF31_RS18830	COG3387	PFAM Glycoside hydrolase 15-related
SF31_RS18840	COG4942	peptidase
SF31_RS18845	COG1529	Aldehyde oxidase and xanthine dehydrogenase
SF31_RS18850	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
SF31_RS18855	COG2080	2 iron, 2 sulfur cluster binding
SF31_RS18860	COG3829	transcription factor binding
SF31_RS18865	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
SF31_RS18870	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
SF31_RS18875	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
SF31_RS18885	COG0549	Belongs to the carbamate kinase family
SF31_RS18890	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
SF31_RS18890	COG3608	succinylglutamate desuccinylase aspartoacylase
SF31_RS18895	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
SF31_RS18900	COG2068	MobA-Related Protein
SF31_RS18905	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
SF31_RS18905	COG0493	'glutamate synthase
SF31_RS18910	COG0402	S-adenosylhomocysteine deaminase activity
SF31_RS18915	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
SF31_RS18920	COG1529	Aldehyde oxidase and xanthine dehydrogenase
SF31_RS18920	COG2080	2 iron, 2 sulfur cluster binding
SF31_RS18925	COG2233	PERMEase
SF31_RS18930	COG0402	S-adenosylhomocysteine deaminase activity
SF31_RS18935	COG2252	PERMEase
SF31_RS18940	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
SF31_RS18945	COG0493	'glutamate synthase
SF31_RS18945	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
SF31_RS18955	COG2233	PERMEase
SF31_RS18970	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
SF31_RS18980	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
SF31_RS18985	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
SF31_RS18990	COG4974	Belongs to the 'phage' integrase family
SF31_RS18995	COG0716	FMN binding
SF31_RS19005	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
SF31_RS19015	COG1272	protein, Hemolysin III
SF31_RS19025	COG2723	6-phospho-beta-galactosidase activity
SF31_RS19030	COG1028	Short-chain dehydrogenase reductase Sdr
SF31_RS19050	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
SF31_RS19055	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
SF31_RS19060	COG0006	proline dipeptidase activity
SF31_RS19075	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
SF31_RS19080	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
SF31_RS19100	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
SF31_RS19100	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
SF31_RS19105	COG1703	isobutyryl-CoA mutase activity
SF31_RS19110	COG1024	Enoyl-CoA hydratase
SF31_RS19115	COG0427	acetyl-CoA hydrolase
SF31_RS19120	COG0583	DNA-binding transcription factor activity
SF31_RS19125	COG2968	Membrane
SF31_RS19130	COG1279	arginine transmembrane transporter activity
SF31_RS19135	COG0668	transmembrane transport
SF31_RS19140	COG0191	fructose-bisphosphate aldolase activity
SF31_RS19155	COG1072	(Pantothenic acid kinase))
SF31_RS19160	COG3722	fumarate hydratase activity
SF31_RS19165	COG1494	fructose-1,6-bisphosphatase
SF31_RS19170	COG1063	alcohol dehydrogenase
SF31_RS19175	COG2213	PTS system mannitol-specific
SF31_RS19180	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SF31_RS19185	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
SF31_RS19190	COG0501	Belongs to the peptidase M48B family
SF31_RS19200	COG1166	arginine decarboxylase activity
SF31_RS19225	COG2814	Major facilitator Superfamily
SF31_RS19235	COG2356	endonuclease I
SF31_RS19240	COG1385	rRNA (uridine-N3-)-methyltransferase activity
SF31_RS19245	COG0189	ligase activity
SF31_RS19260	COG2805	Type II/IV secretion system protein
SF31_RS19265	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
SF31_RS19270	COG0762	integral membrane protein
SF31_RS19280	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
SF31_RS19285	COG0635	Involved in the biosynthesis of porphyrin-containing compound
SF31_RS19295	COG0252	asparaginase activity
SF31_RS19310	COG3171	Protein conserved in bacteria
SF31_RS19320	COG1194	a g-specific adenine glycosylase
SF31_RS19335	COG2211	Major facilitator Superfamily
SF31_RS19340	COG1982	Orn Lys Arg decarboxylase major
SF31_RS19345	COG1811	Na channel or pump
SF31_RS19355	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
SF31_RS19365	COG3031	protein transport across the cell outer membrane
SF31_RS19375	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
SF31_RS19380	COG3064	Membrane
SF31_RS19390	COG1620	l-lactate permease
SF31_RS19395	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
SF31_RS19400	COG3193	protein, possibly involved in utilization of glycolate and propanediol
SF31_RS19405	COG0247	lactate metabolic process
SF31_RS19410	COG0277	FAD linked oxidase domain protein
SF31_RS19415	COG0277	FAD linked oxidase domain protein
SF31_RS19420	COG2186	Transcriptional regulator
SF31_RS19425	COG0456	acetyltransferase
SF31_RS19435	COG2244	polysaccharide biosynthetic process
SF31_RS19440	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
SF31_RS19445	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
SF31_RS19450	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
SF31_RS19455	COG0306	phosphate transporter
SF31_RS19460	COG0754	glutathionylspermidine amidase activity
SF31_RS19465	COG0625	glutathione transferase activity
SF31_RS19470	COG0298	carbon dioxide binding
SF31_RS19480	COG1773	rubredoxin
SF31_RS19485	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
SF31_RS19490	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
SF31_RS19495	COG5557	Pfam Polysulphide reductase, NrfD
SF31_RS19500	COG0437	4 iron, 4 sulfur cluster binding
SF31_RS19505	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
SF31_RS19525	COG0667	Aldo Keto reductase
SF31_RS19535	COG1028	Short-chain dehydrogenase reductase Sdr
SF31_RS19540	COG0848	biopolymer transport protein
SF31_RS19545	COG0811	peptide transport
SF31_RS19555	COG0626	cystathionine gamma-synthase activity
SF31_RS19560	COG0586	Pfam SNARE associated Golgi protein
SF31_RS19565	COG2207	Transcriptional regulator
SF31_RS19575	COG1979	alcohol dehydrogenase
SF31_RS19580	COG0656	L-ascorbic acid biosynthetic process
SF31_RS19590	COG4238	major outer membrane lipoprotein
SF31_RS19595	COG1032	radical SAM domain protein
SF31_RS19600	COG2132	Multicopper oxidase
SF31_RS19605	COG0204	Acyl-transferase
SF31_RS19610	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
SF31_RS19615	COG4166	transmembrane transport
SF31_RS19620	COG2944	sequence-specific DNA binding
SF31_RS19630	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
SF31_RS19635	COG3111	PFAM Bacterial OB fold (BOF) protein
SF31_RS19640	COG0745	RESPONSE REGULATOR receiver
SF31_RS19645	COG0642	Histidine kinase
SF31_RS19655	COG2249	NAD(P)H dehydrogenase (quinone) activity
SF31_RS19660	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
SF31_RS19665	COG0187	DNA topoisomerase II activity
SF31_RS19670	COG3150	esterase
SF31_RS19675	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
SF31_RS19680	COG3151	Protein conserved in bacteria
SF31_RS19685	COG0494	nUDIX hydrolase
SF31_RS19690	COG1538	Outer membrane efflux protein
SF31_RS19705	COG0754	glutathionylspermidine amidase activity
SF31_RS19710	COG3384	dioxygenase
SF31_RS19730	COG2960	long-chain fatty acid transporting porin activity
SF31_RS19735	COG3539	Fimbrial protein
SF31_RS19750	COG3188	usher protein
SF31_RS19755	COG3121	Chaperone
SF31_RS19760	COG3539	Fimbrial protein
SF31_RS19770	COG1585	Membrane protein implicated in regulation of membrane protease activity
SF31_RS19775	COG2268	Band 7 protein
SF31_RS19800	COG3025	triphosphatase activity
SF31_RS19810	COG4991	sh3 domain protein
SF31_RS19825	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
SF31_RS19835	COG0583	DNA-binding transcription factor activity
SF31_RS19840	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
SF31_RS19845	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
SF31_RS19850	COG0471	metal ion transport
SF31_RS19860	COG0828	Belongs to the bacterial ribosomal protein bS21 family
SF31_RS19865	COG0358	DNA primase activity
SF31_RS19870	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
SF31_RS19885	COG2375	cellular response to nickel ion
SF31_RS19890	COG1695	Transcriptional regulator
SF31_RS19895	COG0840	transmembrane signaling receptor activity
SF31_RS19905	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SF31_RS19910	COG1609	Transcriptional regulator
SF31_RS19915	COG3250	beta-galactosidase activity
SF31_RS19920	COG2731	YhcH YjgK YiaL family protein
SF31_RS19925	COG0531	amino acid
SF31_RS19935	COG3408	Glycogen debranching enzyme
SF31_RS19935	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
SF31_RS19940	COG1902	pentaerythritol trinitrate reductase activity
SF31_RS19940	COG0446	pyridine nucleotide-disulphide oxidoreductase
SF31_RS19945	COG5499	transcription regulator containing HTH domain
SF31_RS19950	COG4680	protein conserved in bacteria
SF31_RS19965	COG1451	nucleotide metabolic process
SF31_RS19970	COG2949	membrane
SF31_RS19975	COG0673	inositol 2-dehydrogenase activity
SF31_RS19980	COG0861	Integral membrane protein TerC family
SF31_RS19985	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
SF31_RS19995	COG2721	sulfolactate sulfo-lyase activity
SF31_RS20005	COG2271	Major facilitator Superfamily
SF31_RS20010	COG2186	Transcriptional regulator
SF31_RS20015	COG0586	Pfam SNARE associated Golgi protein
SF31_RS20025	COG1422	Protein of unknown function (DUF1090)
SF31_RS20030	COG4575	ribosome binding
SF31_RS20035	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
SF31_RS20045	COG2259	Doxx family
SF31_RS20050	COG0435	Glutathione S-transferase
SF31_RS20055	COG3152	Membrane
SF31_RS20060	COG3152	Membrane
SF31_RS20065	COG0583	DNA-binding transcription factor activity
SF31_RS20070	COG1741	Belongs to the pirin family
SF31_RS20085	COG0814	amino acid
SF31_RS20090	COG1760	l-serine dehydratase
SF31_RS20095	COG0251	oxidation-reduction process
SF31_RS20100	COG1882	Formate acetyltransferase
SF31_RS20105	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
SF31_RS20115	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
SF31_RS20120	COG0583	DNA-binding transcription factor activity
SF31_RS20140	COG1929	Belongs to the glycerate kinase type-1 family
SF31_RS20145	COG2084	Dehydrogenase
SF31_RS20155	COG2271	Major facilitator Superfamily
SF31_RS20160	COG2721	sulfolactate sulfo-lyase activity
SF31_RS20165	COG2002	toxin-antitoxin pair type II binding
SF31_RS20175	COG1349	DNA-binding transcription factor activity
SF31_RS20185	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SF31_RS20195	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
SF31_RS20200	COG2222	sugar isomerase
SF31_RS20210	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SF31_RS20215	COG3715	PTS system
SF31_RS20220	COG3716	PTS system mannose fructose sorbose family IID component
SF31_RS20225	COG0363	glucosamine-6-phosphate deaminase activity
SF31_RS20230	COG3539	Fimbrial protein
SF31_RS20235	COG3121	Chaperone
SF31_RS20240	COG3188	usher protein
SF31_RS20245	COG3539	Fimbrial protein
SF31_RS20250	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
SF31_RS20255	COG3107	peptidoglycan biosynthetic process
SF31_RS20270	COG2823	Periplasmic or secreted lipoprotein
SF31_RS20275	COG0701	Predicted permease
SF31_RS20280	COG0702	epimerase
SF31_RS20285	COG0693	protein deglycase activity
SF31_RS20300	COG3153	acetyltransferase
SF31_RS20305	COG3154	lipid carrier protein
SF31_RS20310	COG0826	peptidase U32
SF31_RS20315	COG0826	peptidase U32
SF31_RS20320	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
SF31_RS20325	COG0814	amino acid
SF31_RS20335	COG0513	Belongs to the DEAD box helicase family
SF31_RS20370	COG0195	Participates in both transcription termination and antitermination
SF31_RS20390	COG2194	sulfuric ester hydrolase activity
SF31_RS20400	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
SF31_RS20410	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
SF31_RS20415	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
SF31_RS20425	COG1534	Rna-binding protein
SF31_RS20430	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
SF31_RS20435	COG2027	D-alanyl-D-alanine carboxypeptidase
SF31_RS20445	COG0697	spore germination
SF31_RS20460	COG0142	geranyltranstransferase activity
SF31_RS20465	COG3423	Transcriptional regulator
SF31_RS20475	COG5007	Belongs to the BolA IbaG family
SF31_RS20480	COG3113	response to antibiotic
SF31_RS20485	COG2854	intermembrane phospholipid transfer
SF31_RS20490	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
SF31_RS20495	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
SF31_RS20500	COG1127	ABC transporter
SF31_RS20505	COG0530	calcium, potassium:sodium antiporter activity
SF31_RS20510	COG0517	IMP dehydrogenase activity
SF31_RS20510	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
SF31_RS20515	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
SF31_RS20520	COG3117	lipopolysaccharide transmembrane transporter activity
SF31_RS20525	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
SF31_RS20530	COG1137	ATPase activity
SF31_RS20535	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
SF31_RS20540	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
SF31_RS20555	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
SF31_RS20560	COG0515	serine threonine protein kinase
SF31_RS20570	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
SF31_RS20575	COG0784	Response regulator, receiver
SF31_RS20575	COG5002	protein histidine kinase activity
SF31_RS20575	COG2198	Histidine kinase
SF31_RS20580	COG1242	4 iron, 4 sulfur cluster binding
SF31_RS20585	COG0067	glutamate synthase
SF31_RS20585	COG0069	glutamate synthase activity
SF31_RS20585	COG0070	glutamate synthase
SF31_RS20590	COG0493	'glutamate synthase
SF31_RS20595	COG3539	Fimbrial protein
SF31_RS20600	COG3121	Chaperone
SF31_RS20605	COG3188	usher protein
SF31_RS20625	COG3539	Fimbrial protein
SF31_RS20630	COG4804	nuclease activity
SF31_RS20635	COG2731	YhcH YjgK YiaL family protein
SF31_RS20665	COG3069	C4-dicarboxylate transmembrane transporter activity
SF31_RS20670	COG2969	positive regulation of protein catabolic process
SF31_RS20675	COG0625	glutathione transferase activity
SF31_RS20690	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
SF31_RS20695	COG3105	Protein conserved in bacteria
SF31_RS20700	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
SF31_RS20705	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
SF31_RS20725	COG2732	(Barnase) inhibitor
SF31_RS20745	COG0583	DNA-binding transcription factor activity
SF31_RS20750	COG0312	modulator of DNA gyrase
SF31_RS20755	COG3164	Protein of unknown function
SF31_RS20760	COG1530	ribonuclease E activity
SF31_RS20765	COG0424	maF-like protein
SF31_RS20770	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
SF31_RS20775	COG1792	Involved in formation and maintenance of cell shape
SF31_RS20780	COG1077	Cell shape determining protein MreB Mrl
SF31_RS20790	COG2199	diguanylate cyclase activity
SF31_RS20790	COG2200	EAL domain
SF31_RS20795	COG0604	alcohol dehydrogenase
SF31_RS20815	COG0511	ligase activity, forming carbon-carbon bonds
SF31_RS20820	COG0439	Biotin carboxylase
SF31_RS20825	COG3924	membrane
SF31_RS20830	COG4145	pantothenate transmembrane transporter activity
SF31_RS20840	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
SF31_RS20850	COG2189	Belongs to the N(4) N(6)-methyltransferase family
SF31_RS20860	COG1309	transcriptional regulator
SF31_RS20865	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
SF31_RS20870	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
SF31_RS20885	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SF31_RS20890	COG4597	amino acid ABC transporter
SF31_RS20895	COG0765	amino acid transport
SF31_RS20900	COG1126	abc transporter atp-binding protein
SF31_RS20940	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
SF31_RS20960	COG0551	DNA topoisomerase type I activity
SF31_RS20970	COG0758	DNA mediated transformation
SF31_RS20990	COG0569	domain protein
SF31_RS21000	COG3036	rescue of stalled ribosome
SF31_RS21005	COG0789	Transcriptional regulator
SF31_RS21045	COG0201	protein transport
SF31_RS21135	COG0089	rRNA binding
SF31_RS21160	COG3267	Type II secretory pathway component ExeA
SF31_RS21160	COG3409	Peptidoglycan-binding domain 1 protein
SF31_RS21165	COG3031	protein transport across the cell outer membrane
SF31_RS21170	COG1450	Type ii and iii secretion system protein
SF31_RS21175	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
SF31_RS21180	COG1459	type II secretion system
SF31_RS21185	COG2165	general secretion pathway protein
SF31_RS21190	COG2165	general secretion pathway protein
SF31_RS21195	COG2165	general secretion pathway protein
SF31_RS21200	COG4795	General secretion pathway protein
SF31_RS21205	COG3156	type II secretion system protein K
SF31_RS21210	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
SF31_RS21215	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
SF31_RS21220	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
SF31_RS21225	COG2193	ferroxidase activity
SF31_RS21230	COG2906	2 iron, 2 sulfur cluster binding
SF31_RS21235	COG3979	chitinase
SF31_RS21275	COG2964	Protein conserved in bacteria
SF31_RS21280	COG0545	Peptidyl-prolyl cis-trans isomerase
SF31_RS21290	COG1047	Peptidyl-prolyl cis-trans
SF31_RS21295	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
SF31_RS21310	COG0488	(ABC) transporter
SF31_RS21315	COG0429	hydrolase of the alpha beta-hydrolase fold
SF31_RS21325	COG3954	Phosphoribulokinase
SF31_RS21330	COG1765	OsmC-like protein
SF31_RS21340	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
SF31_RS21345	COG1289	transmembrane transporter activity
SF31_RS21350	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
SF31_RS21355	COG0512	Glutamine amidotransferase of anthranilate synthase
SF31_RS21360	COG2184	nucleotidyltransferase activity
SF31_RS21370	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
SF31_RS21380	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
SF31_RS21385	COG2146	nitrite reductase [NAD(P)H] activity
SF31_RS21390	COG2116	formate transmembrane transporter activity
SF31_RS21405	COG0531	amino acid
SF31_RS21410	COG2222	sugar isomerase
SF31_RS21415	COG1082	Xylose isomerase domain protein TIM barrel
SF31_RS21420	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
SF31_RS21425	COG2188	Transcriptional regulator
SF31_RS21430	COG0626	cystathionine gamma-synthase activity
SF31_RS21445	COG1735	metal-dependent hydrolase with the TIM-barrel fold
SF31_RS21450	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
SF31_RS21455	COG3457	Alanine racemase
SF31_RS21465	COG2188	Transcriptional regulator
SF31_RS21470	COG0180	Tryptophanyl-tRNA synthetase
SF31_RS21475	COG0546	phosphoglycolate phosphatase activity
SF31_RS21480	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
SF31_RS21485	COG0338	D12 class N6 adenine-specific DNA methyltransferase
SF31_RS21490	COG3266	domain, Protein
SF31_RS21505	COG4796	Type ii and iii secretion system protein
SF31_RS21520	COG3166	PFAM Fimbrial assembly family protein
SF31_RS21525	COG4972	Pilus assembly protein
SF31_RS21530	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
SF31_RS21535	COG0494	nUDIX hydrolase
SF31_RS21545	COG1011	Hydrolase
SF31_RS21550	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
SF31_RS21560	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
SF31_RS21585	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
SF31_RS21590	COG2183	response to ionizing radiation
SF31_RS21595	COG1918	ferrous iron import across plasma membrane
SF31_RS21600	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
SF31_RS21610	COG5464	transposase or invertase
SF31_RS21620	COG1040	competence protein
SF31_RS21630	COG2610	gluconate transmembrane transporter activity
SF31_RS21635	COG1640	4-alpha-glucanotransferase
SF31_RS21640	COG0058	SHG alpha-glucan phosphorylase activity
SF31_RS21655	COG1690	Belongs to the RtcB family
SF31_RS21660	COG4650	regulator
SF31_RS21665	COG1349	DNA-binding transcription factor activity
SF31_RS21680	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
SF31_RS21685	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
SF31_RS21690	COG0058	SHG alpha-glucan phosphorylase activity
SF31_RS21715	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
SF31_RS21720	COG2095	MarC family integral membrane protein
SF31_RS21725	COG2610	gluconate transmembrane transporter activity
SF31_RS21730	COG3265	gluconokinase activity
SF31_RS21735	COG1609	Transcriptional regulator
SF31_RS21740	COG1741	Belongs to the pirin family
SF31_RS21745	COG0673	inositol 2-dehydrogenase activity
SF31_RS21750	COG1247	-acetyltransferase
SF31_RS21755	COG3157	Type VI secretion system effector, Hcp
SF31_RS21775	COG0405	Gamma-glutamyltransferase
SF31_RS21785	COG0584	glycerophosphoryl diester phosphodiesterase
SF31_RS21790	COG3842	ATPase activity
SF31_RS21795	COG0395	ABC-type sugar transport system, permease component
SF31_RS21800	COG1175	transmembrane transport
SF31_RS21805	COG1653	transport
SF31_RS21815	COG0410	ABC transporter
SF31_RS21820	COG0411	ABC transporter
SF31_RS21825	COG4177	L-phenylalanine transmembrane transporter activity
SF31_RS21830	COG0559	Belongs to the binding-protein-dependent transport system permease family
SF31_RS21835	COG0683	leucine binding
SF31_RS21840	COG0456	acetyltransferase
SF31_RS21850	COG0683	leucine binding
SF31_RS21855	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
SF31_RS21860	COG2177	Part of the ABC transporter FtsEX involved in
SF31_RS21865	COG2884	Cell division ATP-binding protein ftsE
SF31_RS21870	COG0552	protein localization to endoplasmic reticulum
SF31_RS21875	COG0742	ribosomal rna small subunit methyltransferase
SF31_RS21880	COG3776	membrane
SF31_RS21890	COG3714	YhhN family
SF31_RS21895	COG2217	Heavy metal translocating P-type atpase
SF31_RS21905	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
SF31_RS21915	COG0477	Major facilitator Superfamily
SF31_RS21920	COG0628	permease
SF31_RS21925	COG2091	lysine biosynthetic process via aminoadipic acid
SF31_RS21930	COG0747	negative chemotaxis
SF31_RS21935	COG0601	transmembrane transport
SF31_RS21940	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SF31_RS21945	COG0444	Belongs to the ABC transporter superfamily
SF31_RS21950	COG1124	(ABC) transporter
SF31_RS21960	COG3209	COG3209 Rhs family protein
SF31_RS21975	COG5433	transposase activity
SF31_RS21980	COG0842	Transport permease protein
SF31_RS21985	COG1129	ABC transporter
SF31_RS21985	COG0842	Transport permease protein
SF31_RS21990	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
SF31_RS22020	COG2081	HI0933 family
SF31_RS22025	COG0306	phosphate transporter
SF31_RS22035	COG0589	response to stress
SF31_RS22040	COG3104	oligopeptide transport
SF31_RS22050	COG0339	signal peptide processing
SF31_RS22055	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
SF31_RS22060	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
SF31_RS22075	COG0640	Transcriptional regulator
SF31_RS22080	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
SF31_RS22085	COG1393	Belongs to the ArsC family
SF31_RS22105	COG3065	identical protein binding
SF31_RS22110	COG2197	response regulator
SF31_RS22115	COG1285	pathogenesis
SF31_RS22130	COG3247	response to pH
SF31_RS22135	COG2771	luxR family
SF31_RS22145	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
SF31_RS22150	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
SF31_RS22155	COG2207	Transcriptional regulator
SF31_RS22160	COG2207	Transcriptional regulator
SF31_RS22165	COG0076	glutamate decarboxylase activity
SF31_RS22170	COG1858	cytochrome C peroxidase
SF31_RS22180	COG2197	response regulator
SF31_RS22185	COG0583	DNA-binding transcription factor activity
SF31_RS22190	COG1295	ribonuclease BN
SF31_RS22195	COG0477	Major facilitator Superfamily
SF31_RS22200	COG2982	Protein involved in outer membrane biogenesis
SF31_RS22205	COG2200	EAL domain
SF31_RS22215	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
SF31_RS22220	COG0612	Peptidase, M16
SF31_RS22230	COG2199	diguanylate cyclase activity
SF31_RS22230	COG2200	EAL domain
SF31_RS22235	COG3118	belongs to the thioredoxin family
SF31_RS22235	COG0457	Tetratricopeptide repeat
SF31_RS22240	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
SF31_RS22245	COG1215	transferase activity, transferring glycosyl groups
SF31_RS22250	COG1215	transferase activity, transferring glycosyl groups
SF31_RS22275	COG2194	sulfuric ester hydrolase activity
SF31_RS22290	COG0814	amino acid
SF31_RS22295	COG4608	Belongs to the ABC transporter superfamily
SF31_RS22300	COG0444	Belongs to the ABC transporter superfamily
SF31_RS22305	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SF31_RS22310	COG0601	transmembrane transport
SF31_RS22320	COG0747	negative chemotaxis
SF31_RS22335	COG2194	sulfuric ester hydrolase activity
SF31_RS22340	COG2223	nitrite transmembrane transporter activity
SF31_RS22345	COG5571	outer membrane autotransporter
SF31_RS22350	COG2818	Glycosylase
SF31_RS22355	COG0456	acetyltransferase
SF31_RS22360	COG0243	molybdopterin cofactor binding
SF31_RS22365	COG2885	chlorophyll binding
SF31_RS22380	COG2944	sequence-specific DNA binding
SF31_RS22385	COG1278	Cold shock
SF31_RS22395	COG2963	transposase activity
SF31_RS22400	COG2801	Transposase and inactivated derivatives
SF31_RS22420	COG3274	enterobacterial common antigen metabolic process
SF31_RS22425	COG4682	membrane
SF31_RS22430	COG4682	membrane
SF31_RS22435	COG1070	Carbohydrate kinase
SF31_RS22445	COG4213	ABC transporter substrate-binding protein
SF31_RS22450	COG1129	ABC transporter
SF31_RS22455	COG4214	carbohydrate transport
SF31_RS22460	COG1609	Transcriptional regulator
SF31_RS22460	COG2207	Transcriptional regulator
SF31_RS22465	COG2992	FlgJ-related protein
SF31_RS22470	COG0366	Alpha amylase catalytic
SF31_RS22475	COG3977	Valine--pyruvate aminotransferase
SF31_RS22485	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
SF31_RS22490	COG1414	Transcriptional regulator
SF31_RS22500	COG2731	YhcH YjgK YiaL family protein
SF31_RS22505	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
SF31_RS22510	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
SF31_RS22515	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
SF31_RS22520	COG1070	Carbohydrate kinase
SF31_RS22525	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
SF31_RS22530	COG3623	hexulose-6-phosphate isomerase
SF31_RS22535	COG0235	Class ii aldolase
SF31_RS22540	COG3713	MltA-interacting MipA family protein
SF31_RS22545	COG0583	DNA-binding transcription factor activity
SF31_RS22550	COG1566	PFAM secretion protein HlyD family protein
SF31_RS22565	COG1012	belongs to the aldehyde dehydrogenase family
SF31_RS22570	COG1454	alcohol dehydrogenase
SF31_RS22575	COG3276	selenocysteine insertion sequence binding
SF31_RS22585	COG0625	glutathione transferase activity
SF31_RS22590	COG3209	COG3209 Rhs family protein
SF31_RS22595	COG1413	lyase activity
SF31_RS22600	COG3209	COG3209 Rhs family protein
SF31_RS22605	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
SF31_RS22615	COG1566	PFAM secretion protein HlyD family protein
SF31_RS22625	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
SF31_RS22625	COG2213	PTS system mannitol-specific
SF31_RS22635	COG3722	fumarate hydratase activity
SF31_RS22650	COG1620	l-lactate permease
SF31_RS22655	COG2186	Transcriptional regulator
SF31_RS22665	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
SF31_RS22670	COG1045	serine acetyltransferase
SF31_RS22685	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
SF31_RS22690	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
SF31_RS22695	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
SF31_RS22700	COG4942	peptidase
SF31_RS22705	COG2861	carbohydrate metabolic process
SF31_RS22710	COG1216	Glycosyl transferase, family 2
SF31_RS22720	COG0156	8-amino-7-oxononanoate synthase activity
SF31_RS22735	COG0859	PFAM glycosyl transferase family 9
SF31_RS22740	COG0859	PFAM glycosyl transferase family 9
SF31_RS22745	COG3307	-O-antigen
SF31_RS22750	COG0859	PFAM glycosyl transferase family 9
SF31_RS22760	COG3642	lipopolysaccharide core region biosynthetic process
SF31_RS22765	COG1442	glycosyl transferase family 8
SF31_RS22770	COG1442	glycosyl transferase family 8
SF31_RS22775	COG0438	transferase activity, transferring glycosyl groups
SF31_RS22780	COG4641	Protein conserved in bacteria
SF31_RS22780	COG0438	transferase activity, transferring glycosyl groups
SF31_RS22785	COG0515	serine threonine protein kinase
SF31_RS22790	COG0438	transferase activity, transferring glycosyl groups
SF31_RS22795	COG0859	PFAM glycosyl transferase family 9
SF31_RS22800	COG1519	Transferase
SF31_RS22830	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
SF31_RS22835	COG0756	dUTP diphosphatase activity
SF31_RS22855	COG1561	YicC-like family, N-terminal region
SF31_RS22860	COG3645	SOS response
SF31_RS22865	COG2860	membrane
SF31_RS22875	COG0194	GDP metabolic process
SF31_RS22885	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
SF31_RS22890	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
SF31_RS22895	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
SF31_RS22900	COG0786	glutamate:sodium symporter activity
SF31_RS22905	COG2233	PERMEase
SF31_RS22910	COG2982	Protein involved in outer membrane biogenesis
SF31_RS22915	COG1501	Belongs to the glycosyl hydrolase 31 family
SF31_RS22920	COG2211	Major facilitator Superfamily
SF31_RS22935	COG2814	Major facilitator Superfamily
SF31_RS22940	COG0697	spore germination
SF31_RS22945	COG1464	Belongs to the NlpA lipoprotein family
SF31_RS22970	COG2252	PERMEase
SF31_RS22980	COG2271	Major facilitator Superfamily
SF31_RS22985	COG2271	Major facilitator Superfamily
SF31_RS22990	COG3851	Histidine kinase
SF31_RS22995	COG2197	response regulator
SF31_RS23000	COG0440	acetolactate synthase activity
SF31_RS23005	COG0028	Belongs to the TPP enzyme family
SF31_RS23030	COG2814	Major facilitator Superfamily
SF31_RS23035	COG0641	radical SAM
SF31_RS23045	COG2149	membrane
SF31_RS23055	COG3119	arylsulfatase activity
SF31_RS23060	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
SF31_RS23065	COG2207	Transcriptional regulator
SF31_RS23075	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SF31_RS23075	COG1263	PTS System
SF31_RS23080	COG1263	PTS System
SF31_RS23085	COG2188	Transcriptional regulator
SF31_RS23105	COG5645	(Lipo)protein
SF31_RS23110	COG0823	Involved in the tonB-independent uptake of proteins
SF31_RS23115	COG0644	oxidoreductase
SF31_RS23120	COG2271	Major facilitator Superfamily
SF31_RS23130	COG0800	Aldolase
SF31_RS23135	COG3734	2-keto-3-deoxy-galactonokinase
SF31_RS23140	COG2186	Transcriptional regulator
SF31_RS23150	COG0561	phosphatase activity
SF31_RS23155	COG3753	Protein conserved in bacteria
SF31_RS23165	COG0187	DNA topoisomerase II activity
SF31_RS23175	COG0592	DNA-directed DNA polymerase activity