U068_RS00050 SM00852 Probable molybdopterin binding domain U068_RS00075 SM00271 DnaJ molecular chaperone homology domain U068_RS00120 SM00904 Riboflavin kinase U068_RS00165 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain U068_RS00170 SM00851 MGS-like domain U068_RS00170 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain U068_RS00215 SM00893 Electron transfer flavoprotein domain U068_RS00220 SM00893 Electron transfer flavoprotein domain U068_RS00265 SM00650 Ribosomal RNA adenine dimethylases U068_RS00285 SM00271 DnaJ molecular chaperone homology domain U068_RS00300 SM00487 DEAD-like helicases superfamily U068_RS00300 SM00490 helicase superfamily c-terminal domain U068_RS00305 SM00486 DNA polymerase type-B family U068_RS00310 SM01007 Class II Aldolase and Adducin N-terminal domain U068_RS00335 SM00382 ATPases associated with a variety of cellular activities U068_RS00375 SM01329 U068_RS00375 U068_RS00380 SM00917 LeuA allosteric (dimerisation) domain U068_RS00410 SM00354 helix_turn _helix lactose operon repressor U068_RS00480 SM00842 Cell division protein FtsA U068_RS00485 SM00864 Tubulin/FtsZ family, GTPase domain U068_RS00485 SM00865 Tubulin/FtsZ family, C-terminal domain U068_RS00500 SM00957 SecA DEAD-like domain U068_RS00500 SM00958 SecA preprotein cross-linking domain U068_RS00530 SM01240 U068_RS00530 U068_RS00560 SM00644 U068_RS00560 U068_RS00575 SM00345 helix_turn_helix gluconate operon transcriptional repressor U068_RS00575 SM00895 U068_RS00575 U068_RS00630 SM00564 beta-propeller repeat U068_RS00640 SM00947 Carbonic anhydrase U068_RS00645 SM00382 ATPases associated with a variety of cellular activities U068_RS00750 SM00487 DEAD-like helicases superfamily U068_RS00750 SM00490 helicase superfamily c-terminal domain U068_RS00750 SM00847 Helicase associated domain (HA2) Add an annotation U068_RS00770 SM00382 ATPases associated with a variety of cellular activities U068_RS00815 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U068_RS00820 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. U068_RS00845 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U068_RS00890 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. U068_RS00900 SM00935 Outer membrane protein (OmpH-like) U068_RS00930 SM00481 DNA polymerase alpha chain like domain U068_RS00950 SM00977 TilS substrate C-terminal domain U068_RS00965 SM01322 U068_RS00965 U068_RS01010 SM00382 ATPases associated with a variety of cellular activities U068_RS01010 SM00930 U068_RS01010 U068_RS01065 SM00257 Lysin motif U068_RS01070 SM00849 Metallo-beta-lactamase superfamily U068_RS01085 SM00479 U068_RS01085 U068_RS01160 SM01321 U068_RS01160 U068_RS01230 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase U068_RS01345 SM00382 ATPases associated with a variety of cellular activities U068_RS01380 SM01130 U068_RS01380 U068_RS01400 SM00346 helix_turn_helix isocitrate lyase regulation U068_RS01465 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain U068_RS01470 SM01092 CO dehydrogenase flavoprotein C-terminal domain U068_RS01515 SM00421 helix_turn_helix, Lux Regulon U068_RS01555 SM00342 helix_turn_helix, arabinose operon control protein U068_RS01575 SM00342 helix_turn_helix, arabinose operon control protein U068_RS01630 SM00052 Putative diguanylate phosphodiesterase U068_RS01630 SM00421 helix_turn_helix, Lux Regulon U068_RS01645 SM00248 ankyrin repeats U068_RS01680 SM00829 Enoylreductase U068_RS01705 SM00382 ATPases associated with a variety of cellular activities U068_RS01745 SM00947 Carbonic anhydrase U068_RS01750 SM01116 U068_RS01750 U068_RS01760 SM01266 U068_RS01760 U068_RS01770 SM01038 Beta galactosidase small chain U068_RS01780 SM00346 helix_turn_helix isocitrate lyase regulation U068_RS01805 SM00859 Semialdehyde dehydrogenase, NAD binding domain U068_RS01830 SM00829 Enoylreductase U068_RS01875 SM00062 Bacterial periplasmic substrate-binding proteins U068_RS01880 SM00382 ATPases associated with a variety of cellular activities U068_RS01895 SM01004 Delta-aminolevulinic acid dehydratase U068_RS01915 SM00869 Autotransporter beta-domain U068_RS01970 SM00098 Alkaline phosphatase homologues U068_RS01980 SM00267 diguanylate cyclase U068_RS02050 SM00448 cheY-homologous receiver domain U068_RS02050 SM00862 Transcriptional regulatory protein, C terminal U068_RS02055 SM00091 PAS domain U068_RS02055 SM00387 Histidine kinase-like ATPases U068_RS02055 SM00388 His Kinase A (phosphoacceptor) domain U068_RS02070 SM00642 Alpha-amylase domain U068_RS02090 SM01323 U068_RS02090 U068_RS02105 SM00507 HNH nucleases U068_RS02160 SM00861 Transketolase, pyrimidine binding domain U068_RS02175 SM00981 U068_RS02175 U068_RS02255 SM00382 ATPases associated with a variety of cellular activities U068_RS02255 SM00994 ClpX C4-type zinc finger U068_RS02255 SM01086 C-terminal, D2-small domain, of ClpB protein U068_RS02260 SM00382 ATPases associated with a variety of cellular activities U068_RS02260 SM00464 Found in ATP-dependent protease La (LON) U068_RS02265 SM00411 bacterial (prokaryotic) histone like domain U068_RS02275 SM00278 Helix-hairpin-helix DNA-binding motif class 1 U068_RS02300 SM00344 helix_turn_helix ASNC type U068_RS02305 SM00382 ATPases associated with a variety of cellular activities U068_RS02310 SM00382 ATPases associated with a variety of cellular activities U068_RS02315 SM00938 Nitrogen regulatory protein P-II U068_RS02350 SM00052 Putative diguanylate phosphodiesterase U068_RS02360 SM01266 U068_RS02360 U068_RS02420 SM00382 ATPases associated with a variety of cellular activities U068_RS02430 SM00493 U068_RS02430 U068_RS02435 SM00387 Histidine kinase-like ATPases U068_RS02485 SM00530 Helix-turn-helix XRE-family like proteins U068_RS02505 SM00422 helix_turn_helix, mercury resistance U068_RS02515 SM00244 prohibitin homologues U068_RS02520 SM00382 ATPases associated with a variety of cellular activities U068_RS02535 SM00822 U068_RS02535 U068_RS02545 SM00382 ATPases associated with a variety of cellular activities U068_RS02580 SM00450 Rhodanese Homology Domain U068_RS02595 SM00346 helix_turn_helix isocitrate lyase regulation U068_RS02675 SM01001 AIR carboxylase U068_RS02690 SM00840 U068_RS02690 U068_RS02735 SM00421 helix_turn_helix, Lux Regulon U068_RS02735 SM00448 cheY-homologous receiver domain U068_RS02790 SM00857 Resolvase, N terminal domain U068_RS02800 SM00342 helix_turn_helix, arabinose operon control protein U068_RS02915 SM00342 helix_turn_helix, arabinose operon control protein U068_RS02930 SM00342 helix_turn_helix, arabinose operon control protein U068_RS02940 SM00028 Tetratricopeptide repeats U068_RS02950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U068_RS02950 SM00387 Histidine kinase-like ATPases U068_RS02950 SM00388 His Kinase A (phosphoacceptor) domain U068_RS02955 SM00448 cheY-homologous receiver domain U068_RS02955 SM00862 Transcriptional regulatory protein, C terminal U068_RS03040 SM00923 MbtH-like protein U068_RS03045 SM00823 Phosphopantetheine attachment site U068_RS03045 SM00824 Thioesterase U068_RS03055 SM00382 ATPases associated with a variety of cellular activities U068_RS03095 SM00822 U068_RS03095 U068_RS03125 SM00470 ParB-like nuclease domain U068_RS03210 SM00764 Citrate lyase ligase C-terminal domain U068_RS03215 SM00091 PAS domain U068_RS03215 SM00387 Histidine kinase-like ATPases U068_RS03220 SM00448 cheY-homologous receiver domain U068_RS03235 SM00357 Cold shock protein domain U068_RS03255 SM00729 Elongator protein 3, MiaB family, Radical SAM U068_RS03280 SM00936 Penicillin-binding protein 5, C-terminal domain U068_RS03310 SM00855 Phosphoglycerate mutase family U068_RS03340 SM00671 Sel1-like repeats. U068_RS03350 SM00271 DnaJ molecular chaperone homology domain U068_RS03355 SM00671 Sel1-like repeats. U068_RS03380 SM00382 ATPases associated with a variety of cellular activities U068_RS03395 SM00062 Bacterial periplasmic substrate-binding proteins U068_RS03410 SM00116 Domain in cystathionine beta-synthase and other proteins. U068_RS03410 SM01091 Transporter associated domain U068_RS03425 SM00729 Elongator protein 3, MiaB family, Radical SAM U068_RS03585 SM00448 cheY-homologous receiver domain U068_RS03585 SM00862 Transcriptional regulatory protein, C terminal U068_RS03590 SM00387 Histidine kinase-like ATPases U068_RS03590 SM00388 His Kinase A (phosphoacceptor) domain U068_RS03680 SM00796 Allophanate hydrolase subunit 1 U068_RS03685 SM00797 Allophanate hydrolase subunit 2 U068_RS03695 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain U068_RS03695 SM01232 U068_RS03695 U068_RS03760 SM00861 Transketolase, pyrimidine binding domain U068_RS03775 SM00881 CoA binding domain U068_RS03780 SM00345 helix_turn_helix gluconate operon transcriptional repressor U068_RS03780 SM00866 U068_RS03780 U068_RS03790 SM00872 Alpha mannosidase, middle domain U068_RS03945 SM00855 Phosphoglycerate mutase family U068_RS03970 SM00382 ATPases associated with a variety of cellular activities U068_RS03995 SM00382 ATPases associated with a variety of cellular activities U068_RS04045 SM00729 Elongator protein 3, MiaB family, Radical SAM U068_RS04045 SM00876 Biotin and Thiamin Synthesis associated domain U068_RS04065 SM00487 DEAD-like helicases superfamily U068_RS04065 SM00490 helicase superfamily c-terminal domain U068_RS04075 SM00729 Elongator protein 3, MiaB family, Radical SAM U068_RS04080 SM00852 Probable molybdopterin binding domain U068_RS04115 SM00155 Phospholipase D. Active site motifs. U068_RS04140 SM00382 ATPases associated with a variety of cellular activities U068_RS04155 SM00487 DEAD-like helicases superfamily U068_RS04155 SM00490 helicase superfamily c-terminal domain U068_RS04165 SM00487 DEAD-like helicases superfamily U068_RS04165 SM00488 U068_RS04165 U068_RS04165 SM00491 U068_RS04165 U068_RS04190 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. U068_RS04215 SM00382 ATPases associated with a variety of cellular activities U068_RS04225 SM00062 Bacterial periplasmic substrate-binding proteins U068_RS04225 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. U068_RS04260 SM00529 Helix-turn-helix diphteria tox regulatory element U068_RS04275 SM00382 ATPases associated with a variety of cellular activities U068_RS04310 SM00852 Probable molybdopterin binding domain U068_RS04320 SM00382 ATPases associated with a variety of cellular activities U068_RS04340 SM00052 Putative diguanylate phosphodiesterase U068_RS04345 SM00267 diguanylate cyclase U068_RS04350 SM00729 Elongator protein 3, MiaB family, Radical SAM U068_RS04370 SM00936 Penicillin-binding protein 5, C-terminal domain U068_RS04375 SM00420 helix_turn_helix, Deoxyribose operon repressor U068_RS04375 SM01134 U068_RS04375 U068_RS04380 SM00014 Acid phosphatase homologues U068_RS04455 SM00382 ATPases associated with a variety of cellular activities U068_RS04480 SM00062 Bacterial periplasmic substrate-binding proteins U068_RS04480 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. U068_RS04495 SM00062 Bacterial periplasmic substrate-binding proteins U068_RS04495 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. U068_RS04500 SM00382 ATPases associated with a variety of cellular activities U068_RS04515 SM00644 U068_RS04515 U068_RS04580 SM00382 ATPases associated with a variety of cellular activities U068_RS04585 SM00357 Cold shock protein domain U068_RS04595 SM00382 ATPases associated with a variety of cellular activities U068_RS04595 SM01086 C-terminal, D2-small domain, of ClpB protein U068_RS04605 SM00316 Ribosomal protein S1-like RNA-binding domain U068_RS04615 SM00382 ATPases associated with a variety of cellular activities U068_RS04620 SM00382 ATPases associated with a variety of cellular activities U068_RS04630 SM00344 helix_turn_helix ASNC type U068_RS04635 SM00843 U068_RS04635 U068_RS04645 SM00382 ATPases associated with a variety of cellular activities U068_RS04655 SM00926 Molybdopterin oxidoreductase Fe4S4 domain U068_RS04740 SM00316 Ribosomal protein S1-like RNA-binding domain U068_RS04745 SM00411 bacterial (prokaryotic) histone like domain U068_RS04750 SM00849 Metallo-beta-lactamase superfamily U068_RS04755 SM00382 ATPases associated with a variety of cellular activities U068_RS04820 SM00849 Metallo-beta-lactamase superfamily U068_RS04855 SM00382 ATPases associated with a variety of cellular activities U068_RS04870 SM00062 Bacterial periplasmic substrate-binding proteins U068_RS04930 SM00981 U068_RS04930 U068_RS04935 SM00382 ATPases associated with a variety of cellular activities U068_RS05010 SM00851 MGS-like domain U068_RS05025 SM00881 CoA binding domain U068_RS05030 SM00992 Hemimethylated DNA-binding protein YccV like U068_RS05035 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase U068_RS05115 SM00226 Low molecular weight phosphatase family U068_RS05155 SM00357 Cold shock protein domain U068_RS05160 SM00357 Cold shock protein domain U068_RS05180 SM00073 Histidine Phosphotransfer domain U068_RS05180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U068_RS05180 SM00387 Histidine kinase-like ATPases U068_RS05180 SM00388 His Kinase A (phosphoacceptor) domain U068_RS05180 SM00448 cheY-homologous receiver domain U068_RS05190 SM00448 cheY-homologous receiver domain U068_RS05190 SM00862 Transcriptional regulatory protein, C terminal U068_RS05215 SM00271 DnaJ molecular chaperone homology domain U068_RS05255 SM00903 Flavin reductase like domain U068_RS05350 SM00028 Tetratricopeptide repeats U068_RS05395 SM00481 DNA polymerase alpha chain like domain U068_RS05425 SM00421 helix_turn_helix, Lux Regulon U068_RS05455 SM00506 Appr-1"-p processing enzyme U068_RS05460 SM00155 Phospholipase D. Active site motifs. U068_RS05515 SM00450 Rhodanese Homology Domain U068_RS05520 SM00867 YceI-like domain U068_RS05600 SM00858 U068_RS05600 U068_RS05645 SM00047 Lysozyme subfamily 2 U068_RS05660 SM00316 Ribosomal protein S1-like RNA-binding domain U068_RS05670 SM00363 S4 RNA-binding domain U068_RS05700 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. U068_RS05705 SM00822 U068_RS05705 U068_RS05715 SM00825 Beta-ketoacyl synthase U068_RS05805 SM00257 Lysin motif U068_RS05810 SM00487 DEAD-like helicases superfamily U068_RS05810 SM00490 helicase superfamily c-terminal domain U068_RS05810 SM00982 U068_RS05810 U068_RS05810 SM01058 CarD-like/TRCF domain U068_RS05825 SM00382 ATPases associated with a variety of cellular activities U068_RS05870 SM00382 ATPases associated with a variety of cellular activities U068_RS05885 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. U068_RS05890 SM00387 Histidine kinase-like ATPases U068_RS05895 SM00448 cheY-homologous receiver domain U068_RS05895 SM00862 Transcriptional regulatory protein, C terminal U068_RS05925 SM01329 U068_RS05925 U068_RS05945 SM00422 helix_turn_helix, mercury resistance U068_RS05950 SM00052 Putative diguanylate phosphodiesterase U068_RS05950 SM01034 Sensors of blue-light using FAD U068_RS05975 SM00052 Putative diguanylate phosphodiesterase U068_RS06085 SM00345 helix_turn_helix gluconate operon transcriptional repressor U068_RS06100 SM01005 Alanine racemase, C-terminal domain U068_RS06105 SM01091 Transporter associated domain U068_RS06145 SM01120 U068_RS06145 U068_RS06155 SM00091 PAS domain U068_RS06155 SM00382 ATPases associated with a variety of cellular activities U068_RS06160 SM00869 Autotransporter beta-domain U068_RS06190 SM01400 U068_RS06190 U068_RS06210 SM00937 U068_RS06210 U068_RS06270 SM00421 helix_turn_helix, Lux Regulon U068_RS06270 SM00448 cheY-homologous receiver domain U068_RS06275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U068_RS06275 SM00387 Histidine kinase-like ATPases U068_RS06290 SM00926 Molybdopterin oxidoreductase Fe4S4 domain U068_RS06355 SM00448 cheY-homologous receiver domain U068_RS06365 SM00528 Domain in histone-like proteins of HNS family U068_RS06410 SM00382 ATPases associated with a variety of cellular activities U068_RS06415 SM00382 ATPases associated with a variety of cellular activities U068_RS06425 SM00155 Phospholipase D. Active site motifs. U068_RS06510 SM00481 DNA polymerase alpha chain like domain U068_RS06525 SM00363 S4 RNA-binding domain U068_RS06535 SM00822 U068_RS06535 U068_RS06560 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain U068_RS06560 SM00437 Bacterial DNA topoisomerase I DNA-binding domain U068_RS06560 SM00493 U068_RS06560 U068_RS06595 SM00014 Acid phosphatase homologues U068_RS06605 SM00028 Tetratricopeptide repeats U068_RS06610 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family U068_RS06625 SM00420 helix_turn_helix, Deoxyribose operon repressor U068_RS06625 SM01134 U068_RS06625 U068_RS06635 SM00052 Putative diguanylate phosphodiesterase U068_RS06635 SM00091 PAS domain U068_RS06635 SM00267 diguanylate cyclase U068_RS06645 SM00357 Cold shock protein domain U068_RS06645 SM00955 U068_RS06645 U068_RS06665 SM00382 ATPases associated with a variety of cellular activities U068_RS06670 SM00382 ATPases associated with a variety of cellular activities U068_RS06705 SM01230 U068_RS06705 U068_RS06715 SM00530 Helix-turn-helix XRE-family like proteins U068_RS06735 SM00382 ATPases associated with a variety of cellular activities U068_RS06760 SM00450 Rhodanese Homology Domain U068_RS06765 SM00642 Alpha-amylase domain U068_RS06820 SM00354 helix_turn _helix lactose operon repressor U068_RS06835 SM00091 PAS domain U068_RS06835 SM00382 ATPases associated with a variety of cellular activities U068_RS06845 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain U068_RS06900 SM00100 Cyclic nucleotide-monophosphate binding domain U068_RS06900 SM00419 helix_turn_helix, cAMP Regulatory protein U068_RS06940 SM00463 Small MutS-related domain U068_RS06945 SM00091 PAS domain U068_RS06945 SM00267 diguanylate cyclase U068_RS06960 SM00487 DEAD-like helicases superfamily U068_RS06960 SM00490 helicase superfamily c-terminal domain U068_RS07065 SM00470 ParB-like nuclease domain U068_RS07120 SM00857 Resolvase, N terminal domain U068_RS07140 SM00890 Domain of unknown function U068_RS07175 SM00342 helix_turn_helix, arabinose operon control protein U068_RS07310 SM00195 Dual specificity phosphatase, catalytic domain U068_RS07310 SM00404 Protein tyrosine phosphatase, catalytic domain motif U068_RS07320 SM00382 ATPases associated with a variety of cellular activities U068_RS07320 SM00487 DEAD-like helicases superfamily U068_RS07320 SM00490 helicase superfamily c-terminal domain U068_RS07320 SM00847 Helicase associated domain (HA2) Add an annotation U068_RS07365 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U068_RS07365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U068_RS07365 SM00319 Homologues of the ligand binding domain of Tar U068_RS07375 SM01150 U068_RS07375 U068_RS07425 SM01321 U068_RS07425 U068_RS07440 SM00530 Helix-turn-helix XRE-family like proteins U068_RS07460 SM00530 Helix-turn-helix XRE-family like proteins U068_RS07465 SM00345 helix_turn_helix gluconate operon transcriptional repressor U068_RS07475 SM00382 ATPases associated with a variety of cellular activities U068_RS07520 SM00829 Enoylreductase U068_RS07525 SM00345 helix_turn_helix gluconate operon transcriptional repressor U068_RS07525 SM00895 U068_RS07525 U068_RS07580 SM00903 Flavin reductase like domain U068_RS07610 SM00926 Molybdopterin oxidoreductase Fe4S4 domain U068_RS07635 SM00926 Molybdopterin oxidoreductase Fe4S4 domain U068_RS07655 SM00530 Helix-turn-helix XRE-family like proteins U068_RS07660 SM00829 Enoylreductase U068_RS07665 SM00919 Malic enzyme, NAD binding domain U068_RS07665 SM01274 U068_RS07665 U068_RS07685 SM00382 ATPases associated with a variety of cellular activities U068_RS07690 SM00382 ATPases associated with a variety of cellular activities U068_RS07715 SM00052 Putative diguanylate phosphodiesterase U068_RS07715 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) U068_RS07715 SM00091 PAS domain U068_RS07715 SM00267 diguanylate cyclase U068_RS07720 SM00267 diguanylate cyclase U068_RS07755 SM00382 ATPases associated with a variety of cellular activities U068_RS07770 SM00342 helix_turn_helix, arabinose operon control protein U068_RS07815 SM00530 Helix-turn-helix XRE-family like proteins U068_RS07820 SM00869 Autotransporter beta-domain U068_RS07840 SM00382 ATPases associated with a variety of cellular activities U068_RS07860 SM01133 U068_RS07860 U068_RS07890 SM00267 diguanylate cyclase U068_RS07930 SM00347 helix_turn_helix multiple antibiotic resistance protein U068_RS07935 SM00342 helix_turn_helix, arabinose operon control protein U068_RS07960 SM00267 diguanylate cyclase U068_RS07985 SM00345 helix_turn_helix gluconate operon transcriptional repressor U068_RS07985 SM00895 U068_RS07985 U068_RS08010 SM00857 Resolvase, N terminal domain U068_RS08050 SM00357 Cold shock protein domain U068_RS08075 SM00357 Cold shock protein domain U068_RS08080 SM00357 Cold shock protein domain U068_RS08090 SM00507 HNH nucleases U068_RS08140 SM00530 Helix-turn-helix XRE-family like proteins U068_RS08190 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain U068_RS08220 SM00926 Molybdopterin oxidoreductase Fe4S4 domain U068_RS08225 SM00926 Molybdopterin oxidoreductase Fe4S4 domain U068_RS08305 SM01002 Alanine dehydrogenase/PNT, C-terminal domain U068_RS08305 SM01003 Alanine dehydrogenase/PNT, N-terminal domain U068_RS08330 SM00448 cheY-homologous receiver domain U068_RS08330 SM00862 Transcriptional regulatory protein, C terminal U068_RS08335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U068_RS08335 SM00387 Histidine kinase-like ATPases U068_RS08335 SM00388 His Kinase A (phosphoacceptor) domain U068_RS08390 SM00354 helix_turn _helix lactose operon repressor U068_RS08450 SM00900 U068_RS08450 U068_RS08460 SM00478 endonuclease III U068_RS08460 SM00525 U068_RS08460 U068_RS08485 SM00363 S4 RNA-binding domain U068_RS08510 SM00347 helix_turn_helix multiple antibiotic resistance protein U068_RS08560 SM00479 U068_RS08560 U068_RS08565 SM00382 ATPases associated with a variety of cellular activities U068_RS08565 SM00487 DEAD-like helicases superfamily U068_RS08565 SM00490 helicase superfamily c-terminal domain U068_RS08595 SM00354 helix_turn _helix lactose operon repressor U068_RS08670 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain U068_RS08695 SM00257 Lysin motif U068_RS08715 SM00382 ATPases associated with a variety of cellular activities U068_RS08780 SM00882 Coenzyme A transferase U068_RS08790 SM00342 helix_turn_helix, arabinose operon control protein U068_RS08800 SM00893 Electron transfer flavoprotein domain U068_RS08805 SM00893 Electron transfer flavoprotein domain U068_RS08865 SM00382 ATPases associated with a variety of cellular activities U068_RS08880 SM00411 bacterial (prokaryotic) histone like domain U068_RS08885 SM00873 B3/4 domain U068_RS08885 SM00874 tRNA synthetase B5 domain U068_RS08885 SM00896 Ferredoxin-fold anticodon binding domain U068_RS08915 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain U068_RS08980 SM01060 U068_RS08980 U068_RS08995 SM00342 helix_turn_helix, arabinose operon control protein U068_RS09030 SM00465 GIY-YIG type nucleases (URI domain) U068_RS09105 SM00382 ATPases associated with a variety of cellular activities U068_RS09110 SM00450 Rhodanese Homology Domain U068_RS09130 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase U068_RS09140 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain U068_RS09140 SM00437 Bacterial DNA topoisomerase I DNA-binding domain U068_RS09140 SM00493 U068_RS09140 U068_RS09170 SM00870 U068_RS09170 U068_RS09185 SM00420 helix_turn_helix, Deoxyribose operon repressor U068_RS09185 SM01134 U068_RS09185 U068_RS09205 SM00829 Enoylreductase U068_RS09230 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain U068_RS09250 SM00763 PrkA AAA domain U068_RS09260 SM00267 diguanylate cyclase U068_RS09265 SM00267 diguanylate cyclase U068_RS09285 SM00342 helix_turn_helix, arabinose operon control protein U068_RS09305 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. U068_RS09305 SM00267 diguanylate cyclase U068_RS09340 SM01329 U068_RS09340 U068_RS09360 SM00341 Helicase and RNase D C-terminal U068_RS09360 SM00474 3'-5' exonuclease U068_RS09380 SM00487 DEAD-like helicases superfamily U068_RS09380 SM00491 U068_RS09380 U068_RS09415 SM00052 Putative diguanylate phosphodiesterase U068_RS09420 SM01091 Transporter associated domain U068_RS09465 SM00357 Cold shock protein domain U068_RS09495 SM00346 helix_turn_helix isocitrate lyase regulation U068_RS09510 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. U068_RS09510 SM00245 tail specific protease U068_RS09515 SM00945 ProQ/FINO family U068_RS09520 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. U068_RS09585 SM00479 U068_RS09585 U068_RS09655 SM00257 Lysin motif U068_RS09665 SM00382 ATPases associated with a variety of cellular activities U068_RS09675 SM00382 ATPases associated with a variety of cellular activities U068_RS09680 SM00278 Helix-hairpin-helix DNA-binding motif class 1 U068_RS09755 SM00836 DALR anticodon binding domain U068_RS09755 SM01016 Arginyl tRNA synthetase N terminal dom U068_RS09785 SM00448 cheY-homologous receiver domain U068_RS09790 SM00448 cheY-homologous receiver domain U068_RS09795 SM00138 Methyltransferase, chemotaxis proteins U068_RS09800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U068_RS09800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U068_RS09800 SM00319 Homologues of the ligand binding domain of Tar U068_RS09805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U068_RS09805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U068_RS09805 SM00319 Homologues of the ligand binding domain of Tar U068_RS09810 SM00260 Two component signalling adaptor domain U068_RS09815 SM00073 Histidine Phosphotransfer domain U068_RS09815 SM00260 Two component signalling adaptor domain U068_RS09815 SM00387 Histidine kinase-like ATPases U068_RS09815 SM01231 U068_RS09815 U068_RS09860 SM00382 ATPases associated with a variety of cellular activities U068_RS09930 SM00278 Helix-hairpin-helix DNA-binding motif class 1 U068_RS09930 SM00465 GIY-YIG type nucleases (URI domain) U068_RS09935 SM00421 helix_turn_helix, Lux Regulon U068_RS09935 SM00448 cheY-homologous receiver domain U068_RS09950 SM00421 helix_turn_helix, Lux Regulon U068_RS09955 SM00382 ATPases associated with a variety of cellular activities U068_RS09970 SM00062 Bacterial periplasmic substrate-binding proteins U068_RS09970 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. U068_RS10005 SM00642 Alpha-amylase domain U068_RS10070 SM00382 ATPases associated with a variety of cellular activities U068_RS10120 SM00421 helix_turn_helix, Lux Regulon U068_RS10140 SM00267 diguanylate cyclase U068_RS10170 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U068_RS10195 SM00387 Histidine kinase-like ATPases U068_RS10195 SM00388 His Kinase A (phosphoacceptor) domain U068_RS10200 SM00448 cheY-homologous receiver domain U068_RS10200 SM00862 Transcriptional regulatory protein, C terminal U068_RS10205 SM00095 Transthyretin U068_RS10250 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins U068_RS10250 SM00634 Bacterial Ig-like domain (group 1) U068_RS10355 SM00869 Autotransporter beta-domain U068_RS10410 SM00871 Bacterial transcription activator, effector binding domain U068_RS10415 SM00936 Penicillin-binding protein 5, C-terminal domain U068_RS10420 SM00479 U068_RS10420 U068_RS10505 SM00984 UDP binding domain U068_RS10510 SM01350 U068_RS10510 U068_RS10670 SM00226 Low molecular weight phosphatase family U068_RS10680 SM00116 Domain in cystathionine beta-synthase and other proteins. U068_RS10680 SM01091 Transporter associated domain U068_RS10700 SM00052 Putative diguanylate phosphodiesterase U068_RS10700 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) U068_RS10700 SM00091 PAS domain U068_RS10700 SM00267 diguanylate cyclase U068_RS10705 SM00478 endonuclease III U068_RS10705 SM01009 AlkA N-terminal domain U068_RS10735 SM00327 von Willebrand factor (vWF) type A domain U068_RS10760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U068_RS10760 SM00387 Histidine kinase-like ATPases U068_RS10760 SM00388 His Kinase A (phosphoacceptor) domain U068_RS10765 SM00448 cheY-homologous receiver domain U068_RS10765 SM00862 Transcriptional regulatory protein, C terminal U068_RS10790 SM00046 Diacylglycerol kinase catalytic domain (presumed) U068_RS10795 SM01134 U068_RS10795 U068_RS10810 SM00420 helix_turn_helix, Deoxyribose operon repressor U068_RS10815 SM00829 Enoylreductase U068_RS10855 SM01133 U068_RS10855 U068_RS10875 SM00345 helix_turn_helix gluconate operon transcriptional repressor U068_RS10875 SM00866 U068_RS10875 U068_RS10880 SM00641 Glycosyl hydrolases family 25 U068_RS10950 SM00773 Proposed nucleic acid binding domain U068_RS10970 SM00382 ATPases associated with a variety of cellular activities U068_RS10980 SM00327 von Willebrand factor (vWF) type A domain U068_RS11000 SM00448 cheY-homologous receiver domain U068_RS11000 SM00850 LytTr DNA-binding domain U068_RS11005 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. U068_RS11010 SM00422 helix_turn_helix, mercury resistance U068_RS11025 SM00382 ATPases associated with a variety of cellular activities U068_RS11040 SM01217 U068_RS11040 U068_RS11125 SM00382 ATPases associated with a variety of cellular activities U068_RS11135 SM00354 helix_turn _helix lactose operon repressor U068_RS11185 SM00518 AP endonuclease family 2 U068_RS11205 SM00100 Cyclic nucleotide-monophosphate binding domain U068_RS11250 SM00841 Elongation factor P, C-terminal U068_RS11250 SM01185 U068_RS11250 U068_RS11260 SM00833 Cobalamin synthesis protein cobW C-terminal domain U068_RS11265 SM00014 Acid phosphatase homologues U068_RS11275 SM00052 Putative diguanylate phosphodiesterase U068_RS11295 SM00382 ATPases associated with a variety of cellular activities U068_RS11310 SM00363 S4 RNA-binding domain U068_RS11315 SM00487 DEAD-like helicases superfamily U068_RS11315 SM00490 helicase superfamily c-terminal domain U068_RS11345 SM00869 Autotransporter beta-domain U068_RS11360 SM00421 helix_turn_helix, Lux Regulon U068_RS11360 SM00448 cheY-homologous receiver domain U068_RS11400 SM00382 ATPases associated with a variety of cellular activities U068_RS11425 SM00926 Molybdopterin oxidoreductase Fe4S4 domain U068_RS11455 SM00382 ATPases associated with a variety of cellular activities U068_RS11465 SM00342 helix_turn_helix, arabinose operon control protein U068_RS11490 SM00387 Histidine kinase-like ATPases U068_RS11495 SM00421 helix_turn_helix, Lux Regulon U068_RS11495 SM00448 cheY-homologous receiver domain U068_RS11500 SM00387 Histidine kinase-like ATPases U068_RS11500 SM00388 His Kinase A (phosphoacceptor) domain U068_RS11500 SM00448 cheY-homologous receiver domain U068_RS11505 SM00091 PAS domain U068_RS11505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U068_RS11505 SM00387 Histidine kinase-like ATPases U068_RS11505 SM00388 His Kinase A (phosphoacceptor) domain U068_RS11510 SM00382 ATPases associated with a variety of cellular activities U068_RS11510 SM00448 cheY-homologous receiver domain U068_RS11515 SM00882 Coenzyme A transferase U068_RS11520 SM00882 Coenzyme A transferase U068_RS11550 SM01359 U068_RS11550 U068_RS11550 SM01360 U068_RS11550 U068_RS11565 SM00434 DNA Topoisomerase IV U068_RS11575 SM00869 Autotransporter beta-domain U068_RS11655 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain U068_RS11660 SM00346 helix_turn_helix isocitrate lyase regulation U068_RS11665 SM00852 Probable molybdopterin binding domain U068_RS11730 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain U068_RS11765 SM00849 Metallo-beta-lactamase superfamily U068_RS11775 SM00327 von Willebrand factor (vWF) type A domain U068_RS11840 SM00926 Molybdopterin oxidoreductase Fe4S4 domain U068_RS11840 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region U068_RS11845 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region U068_RS11880 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U068_RS11945 SM00905 Dihydroneopterin aldolase U068_RS11960 SM00382 ATPases associated with a variety of cellular activities U068_RS11975 SM00062 Bacterial periplasmic substrate-binding proteins U068_RS11980 SM00062 Bacterial periplasmic substrate-binding proteins U068_RS12025 SM00859 Semialdehyde dehydrogenase, NAD binding domain U068_RS12045 SM00825 Beta-ketoacyl synthase U068_RS12085 SM00463 Small MutS-related domain U068_RS12285 SM00421 helix_turn_helix, Lux Regulon U068_RS12285 SM00448 cheY-homologous receiver domain U068_RS12290 SM00062 Bacterial periplasmic substrate-binding proteins U068_RS12290 SM00073 Histidine Phosphotransfer domain U068_RS12290 SM00387 Histidine kinase-like ATPases U068_RS12290 SM00388 His Kinase A (phosphoacceptor) domain U068_RS12290 SM00448 cheY-homologous receiver domain U068_RS12345 SM00387 Histidine kinase-like ATPases U068_RS12350 SM00448 cheY-homologous receiver domain U068_RS12350 SM00850 LytTr DNA-binding domain U068_RS12355 SM00342 helix_turn_helix, arabinose operon control protein U068_RS12420 SM00052 Putative diguanylate phosphodiesterase U068_RS12420 SM00267 diguanylate cyclase U068_RS12515 SM00278 Helix-hairpin-helix DNA-binding motif class 1 U068_RS12515 SM00292 breast cancer carboxy-terminal domain U068_RS12515 SM00532 Ligase N family U068_RS12520 SM00771 ZipA, C-terminal domain (FtsZ-binding) U068_RS12560 SM00773 Proposed nucleic acid binding domain U068_RS12570 SM00382 ATPases associated with a variety of cellular activities U068_RS12590 SM00822 U068_RS12590 U068_RS12635 SM00646 U068_RS12635 U068_RS12645 SM00342 helix_turn_helix, arabinose operon control protein U068_RS12650 SM00877 U068_RS12650 U068_RS12655 SM00877 U068_RS12655 U068_RS12700 SM00877 U068_RS12700 U068_RS12725 SM00877 U068_RS12725 U068_RS12730 SM00919 Malic enzyme, NAD binding domain U068_RS12730 SM01274 U068_RS12730 U068_RS12740 SM00861 Transketolase, pyrimidine binding domain U068_RS12760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U068_RS12760 SM00387 Histidine kinase-like ATPases U068_RS12820 SM01130 U068_RS12820 U068_RS12885 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. U068_RS12885 SM00382 ATPases associated with a variety of cellular activities U068_RS12945 SM00052 Putative diguanylate phosphodiesterase U068_RS12945 SM00267 diguanylate cyclase U068_RS12975 SM00116 Domain in cystathionine beta-synthase and other proteins. U068_RS12975 SM01240 U068_RS12975 U068_RS12995 SM00564 beta-propeller repeat U068_RS13015 SM00530 Helix-turn-helix XRE-family like proteins U068_RS13025 SM00562 U068_RS13025 U068_RS13035 SM01359 U068_RS13035 U068_RS13035 SM01360 U068_RS13035 U068_RS13040 SM00450 Rhodanese Homology Domain U068_RS13070 SM00271 DnaJ molecular chaperone homology domain U068_RS13160 SM00829 Enoylreductase U068_RS13170 SM00382 ATPases associated with a variety of cellular activities U068_RS13180 SM00028 Tetratricopeptide repeats U068_RS13200 SM00938 Nitrogen regulatory protein P-II U068_RS13205 SM00382 ATPases associated with a variety of cellular activities U068_RS13205 SM00448 cheY-homologous receiver domain U068_RS13215 SM00387 Histidine kinase-like ATPases U068_RS13215 SM00388 His Kinase A (phosphoacceptor) domain U068_RS13220 SM01211 U068_RS13220 U068_RS13225 SM00062 Bacterial periplasmic substrate-binding proteins U068_RS13285 SM00358 Double-stranded RNA binding motif U068_RS13285 SM00535 Ribonuclease III family U068_RS13335 SM00487 DEAD-like helicases superfamily U068_RS13335 SM00490 helicase superfamily c-terminal domain U068_RS13360 SM00986 Uracil DNA glycosylase superfamily U068_RS13360 SM00987 UreE urease accessory protein, C-terminal domain U068_RS13365 SM00967 RNA 2'-O ribose methyltransferase substrate binding U068_RS13380 SM01144 U068_RS13380 U068_RS13385 SM00881 CoA binding domain U068_RS13390 SM00155 Phospholipase D. Active site motifs. U068_RS13435 SM00382 ATPases associated with a variety of cellular activities U068_RS13435 SM01086 C-terminal, D2-small domain, of ClpB protein U068_RS13445 SM00363 S4 RNA-binding domain U068_RS13465 SM00830 Chorismate mutase type II U068_RS13470 SM00830 Chorismate mutase type II U068_RS13490 SM00267 diguanylate cyclase U068_RS13520 SM00382 ATPases associated with a variety of cellular activities U068_RS13520 SM00962 SRP54-type protein, GTPase domain U068_RS13520 SM00963 SRP54-type protein, helical bundle domain U068_RS13530 SM01091 Transporter associated domain U068_RS13605 SM00487 DEAD-like helicases superfamily U068_RS13605 SM00490 helicase superfamily c-terminal domain U068_RS13760 SM00345 helix_turn_helix gluconate operon transcriptional repressor U068_RS13760 SM00895 U068_RS13760 U068_RS13765 SM00257 Lysin motif U068_RS13765 SM00749 bacterial OsmY and nodulation domain U068_RS13775 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor U068_RS13780 SM00450 Rhodanese Homology Domain U068_RS13785 SM00528 Domain in histone-like proteins of HNS family U068_RS13825 SM00382 ATPases associated with a variety of cellular activities U068_RS13855 SM00347 helix_turn_helix multiple antibiotic resistance protein U068_RS13920 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain U068_RS13935 SM00382 ATPases associated with a variety of cellular activities U068_RS13975 SM00420 helix_turn_helix, Deoxyribose operon repressor U068_RS13975 SM01134 U068_RS13975 U068_RS13985 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. U068_RS13985 SM00382 ATPases associated with a variety of cellular activities U068_RS13990 SM00849 Metallo-beta-lactamase superfamily U068_RS14010 SM00354 helix_turn _helix lactose operon repressor U068_RS14100 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. U068_RS14100 SM00382 ATPases associated with a variety of cellular activities U068_RS14110 SM00533 DNA-binding domain of DNA mismatch repair MUTS family U068_RS14110 SM00534 ATPase domain of DNA mismatch repair MUTS family U068_RS14120 SM00420 helix_turn_helix, Deoxyribose operon repressor U068_RS14120 SM01134 U068_RS14120 U068_RS14135 SM01007 Class II Aldolase and Adducin N-terminal domain U068_RS14155 SM00257 Lysin motif U068_RS14225 SM01101 U068_RS14225 U068_RS14250 SM00487 DEAD-like helicases superfamily U068_RS14250 SM00490 helicase superfamily c-terminal domain U068_RS14295 SM00893 Electron transfer flavoprotein domain U068_RS14340 SM01192 U068_RS14340 U068_RS14340 SM01193 U068_RS14340 U068_RS14360 SM00966 SpoVT / AbrB like domain U068_RS14365 SM00954 Region found in RelA / SpoT proteins U068_RS14375 SM00073 Histidine Phosphotransfer domain U068_RS14375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U068_RS14375 SM00387 Histidine kinase-like ATPases U068_RS14375 SM00388 His Kinase A (phosphoacceptor) domain U068_RS14375 SM00448 cheY-homologous receiver domain U068_RS14380 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain U068_RS14385 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain U068_RS14440 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs U068_RS14440 SM00475 5'-3' exonuclease U068_RS14450 SM01007 Class II Aldolase and Adducin N-terminal domain U068_RS14475 SM00420 helix_turn_helix, Deoxyribose operon repressor U068_RS14475 SM01134 U068_RS14475 U068_RS14515 SM00925 MltA specific insert domain U068_RS14535 SM00646 U068_RS14535 U068_RS14545 SM00382 ATPases associated with a variety of cellular activities U068_RS14595 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. U068_RS14615 SM00927 DNA mismatch repair enzyme MutH U068_RS14640 SM00563 Phosphate acyltransferases U068_RS14645 SM00354 helix_turn _helix lactose operon repressor U068_RS14695 SM00862 Transcriptional regulatory protein, C terminal U068_RS14735 SM00421 helix_turn_helix, Lux Regulon U068_RS14785 SM00257 Lysin motif U068_RS14790 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain U068_RS14795 SM01092 CO dehydrogenase flavoprotein C-terminal domain U068_RS14805 SM00091 PAS domain U068_RS14805 SM00382 ATPases associated with a variety of cellular activities U068_RS14860 SM01092 CO dehydrogenase flavoprotein C-terminal domain U068_RS14865 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain U068_RS14920 SM00937 U068_RS14920 U068_RS14965 SM01022 U068_RS14965 U068_RS15005 SM01011 Aminopeptidase P, N-terminal domain U068_RS15100 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain U068_RS15135 SM00861 Transketolase, pyrimidine binding domain U068_RS15180 SM00731 SprT homologues. U068_RS15205 SM00732 Likely ribonuclease with RNase H fold. U068_RS15210 SM00382 ATPases associated with a variety of cellular activities U068_RS15225 SM01152 U068_RS15225 U068_RS15235 SM00729 Elongator protein 3, MiaB family, Radical SAM U068_RS15245 SM00870 U068_RS15245 U068_RS15270 SM00478 endonuclease III U068_RS15270 SM00525 U068_RS15270 U068_RS15330 SM01276 U068_RS15330 U068_RS15370 SM00345 helix_turn_helix gluconate operon transcriptional repressor U068_RS15370 SM00895 U068_RS15370 U068_RS15515 SM00342 helix_turn_helix, arabinose operon control protein U068_RS15545 SM00729 Elongator protein 3, MiaB family, Radical SAM U068_RS15555 SM00563 Phosphate acyltransferases U068_RS15560 SM00434 DNA Topoisomerase IV U068_RS15570 SM00530 Helix-turn-helix XRE-family like proteins U068_RS15580 SM00871 Bacterial transcription activator, effector binding domain U068_RS15590 SM00448 cheY-homologous receiver domain U068_RS15590 SM00862 Transcriptional regulatory protein, C terminal U068_RS15595 SM00387 Histidine kinase-like ATPases U068_RS15595 SM00388 His Kinase A (phosphoacceptor) domain U068_RS15615 SM00387 Histidine kinase-like ATPases U068_RS15615 SM00433 TopoisomeraseII U068_RS15725 SM00244 prohibitin homologues U068_RS15750 SM01118 U068_RS15750 U068_RS15760 SM00287 Bacterial SH3 domain homologues U068_RS15775 SM00905 Dihydroneopterin aldolase U068_RS15780 SM01207 U068_RS15780 U068_RS15815 SM00400 zinc finger U068_RS15815 SM00493 U068_RS15815 U068_RS15815 SM00766 DNA primase DnaG DnaB-binding U068_RS15845 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) U068_RS15845 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U068_RS15860 SM00354 helix_turn _helix lactose operon repressor U068_RS15865 SM01038 Beta galactosidase small chain U068_RS15895 SM00530 Helix-turn-helix XRE-family like proteins U068_RS15945 SM00858 U068_RS15945 U068_RS15960 SM00345 helix_turn_helix gluconate operon transcriptional repressor U068_RS15960 SM00895 U068_RS15960 U068_RS16115 SM00858 U068_RS16115 U068_RS16130 SM00420 helix_turn_helix, Deoxyribose operon repressor U068_RS16130 SM01134 U068_RS16130 U068_RS16225 SM00749 bacterial OsmY and nodulation domain U068_RS16235 SM00859 Semialdehyde dehydrogenase, NAD binding domain U068_RS16250 SM00465 GIY-YIG type nucleases (URI domain) U068_RS16290 SM00487 DEAD-like helicases superfamily U068_RS16290 SM00490 helicase superfamily c-terminal domain U068_RS16295 SM00028 Tetratricopeptide repeats U068_RS16300 SM00316 Ribosomal protein S1-like RNA-binding domain U068_RS16300 SM00322 K homology RNA-binding domain U068_RS16305 SM01387 U068_RS16305 U068_RS16325 SM00316 Ribosomal protein S1-like RNA-binding domain U068_RS16370 SM00382 ATPases associated with a variety of cellular activities U068_RS16380 SM01103 U068_RS16380 U068_RS16455 SM00382 ATPases associated with a variety of cellular activities U068_RS16485 SM00382 ATPases associated with a variety of cellular activities U068_RS16535 SM00073 Histidine Phosphotransfer domain U068_RS16535 SM00091 PAS domain U068_RS16535 SM00387 Histidine kinase-like ATPases U068_RS16535 SM00388 His Kinase A (phosphoacceptor) domain U068_RS16535 SM00448 cheY-homologous receiver domain U068_RS16540 SM00729 Elongator protein 3, MiaB family, Radical SAM U068_RS16615 SM01130 U068_RS16615 U068_RS16620 SM00345 helix_turn_helix gluconate operon transcriptional repressor U068_RS16620 SM00895 U068_RS16620 U068_RS16660 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. U068_RS16665 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. U068_RS16720 SM00316 Ribosomal protein S1-like RNA-binding domain U068_RS16750 SM00052 Putative diguanylate phosphodiesterase U068_RS16750 SM00267 diguanylate cyclase U068_RS16755 SM00829 Enoylreductase U068_RS16780 SM00878 Biotin carboxylase C-terminal domain U068_RS16845 SM00062 Bacterial periplasmic substrate-binding proteins U068_RS16860 SM00382 ATPases associated with a variety of cellular activities U068_RS16960 SM00422 helix_turn_helix, mercury resistance U068_RS16975 SM00662 RNA polymerases D U068_RS16980 SM00363 S4 RNA-binding domain U068_RS16980 SM01390 U068_RS16980 U068_RS17045 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. U068_RS17050 SM01374 U068_RS17050 U068_RS17070 SM00322 K homology RNA-binding domain U068_RS17085 SM01382 U068_RS17085 U068_RS17085 SM01383 U068_RS17085 U068_RS17105 SM01403 U068_RS17105 U068_RS17130 SM00382 ATPases associated with a variety of cellular activities U068_RS17190 SM00495 Chitin-binding domain type 3 U068_RS17200 SM00838 Elongation factor G C-terminus U068_RS17200 SM00889 Elongation factor G, domain IV U068_RS17265 SM00382 ATPases associated with a variety of cellular activities U068_RS17295 SM00100 Cyclic nucleotide-monophosphate binding domain U068_RS17295 SM00419 helix_turn_helix, cAMP Regulatory protein U068_RS17380 SM00345 helix_turn_helix gluconate operon transcriptional repressor U068_RS17380 SM00866 U068_RS17380 U068_RS17460 SM00965 Secretin and TonB N terminus short domain U068_RS17505 SM00363 S4 RNA-binding domain U068_RS17530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U068_RS17530 SM00387 Histidine kinase-like ATPases U068_RS17530 SM00388 His Kinase A (phosphoacceptor) domain U068_RS17535 SM00448 cheY-homologous receiver domain U068_RS17535 SM00862 Transcriptional regulatory protein, C terminal U068_RS17545 SM00316 Ribosomal protein S1-like RNA-binding domain U068_RS17545 SM00732 Likely ribonuclease with RNase H fold. U068_RS17550 SM00899 U068_RS17550 U068_RS17600 SM00421 helix_turn_helix, Lux Regulon U068_RS17615 SM00382 ATPases associated with a variety of cellular activities U068_RS17620 SM00420 helix_turn_helix, Deoxyribose operon repressor U068_RS17620 SM01134 U068_RS17620 U068_RS17630 SM00450 Rhodanese Homology Domain U068_RS17660 SM00642 Alpha-amylase domain U068_RS17665 SM00642 Alpha-amylase domain U068_RS17670 SM00859 Semialdehyde dehydrogenase, NAD binding domain U068_RS17690 SM00354 helix_turn _helix lactose operon repressor U068_RS17745 SM00382 ATPases associated with a variety of cellular activities U068_RS17770 SM00382 ATPases associated with a variety of cellular activities U068_RS17775 SM00382 ATPases associated with a variety of cellular activities U068_RS17820 SM00382 ATPases associated with a variety of cellular activities U068_RS17825 SM00382 ATPases associated with a variety of cellular activities U068_RS17825 SM00962 SRP54-type protein, GTPase domain U068_RS17825 SM00963 SRP54-type protein, helical bundle domain U068_RS17900 SM00382 ATPases associated with a variety of cellular activities U068_RS17905 SM00382 ATPases associated with a variety of cellular activities U068_RS17940 SM00382 ATPases associated with a variety of cellular activities U068_RS18030 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor U068_RS18065 SM00421 helix_turn_helix, Lux Regulon U068_RS18110 SM00342 helix_turn_helix, arabinose operon control protein U068_RS18115 SM00342 helix_turn_helix, arabinose operon control protein U068_RS18125 SM01235 U068_RS18125 U068_RS18135 SM00421 helix_turn_helix, Lux Regulon U068_RS18160 SM00052 Putative diguanylate phosphodiesterase U068_RS18185 SM00052 Putative diguanylate phosphodiesterase U068_RS18185 SM00267 diguanylate cyclase U068_RS18190 SM00028 Tetratricopeptide repeats U068_RS18250 SM00382 ATPases associated with a variety of cellular activities U068_RS18255 SM00382 ATPases associated with a variety of cellular activities U068_RS18340 SM00530 Helix-turn-helix XRE-family like proteins U068_RS18345 SM00357 Cold shock protein domain U068_RS18410 SM00382 ATPases associated with a variety of cellular activities U068_RS18420 SM00342 helix_turn_helix, arabinose operon control protein U068_RS18425 SM00047 Lysozyme subfamily 2 U068_RS18430 SM00642 Alpha-amylase domain U068_RS18450 SM00346 helix_turn_helix isocitrate lyase regulation U068_RS18485 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family U068_RS18495 SM01007 Class II Aldolase and Adducin N-terminal domain U068_RS18635 SM00345 helix_turn_helix gluconate operon transcriptional repressor U068_RS18635 SM00895 U068_RS18635 U068_RS18650 SM00971 Serine acetyltransferase, N-terminal U068_RS18670 SM00450 Rhodanese Homology Domain U068_RS18695 SM00829 Enoylreductase U068_RS18790 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain U068_RS18790 SM01232 U068_RS18790 U068_RS18850 SM00532 Ligase N family U068_RS18855 SM00072 Guanylate kinase homologues. U068_RS18860 SM01409 U068_RS18860 U068_RS18865 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. U068_RS18865 SM00954 Region found in RelA / SpoT proteins U068_RS18875 SM00487 DEAD-like helicases superfamily U068_RS18875 SM00490 helicase superfamily c-terminal domain U068_RS18970 SM00387 Histidine kinase-like ATPases U068_RS18975 SM00421 helix_turn_helix, Lux Regulon U068_RS18975 SM00448 cheY-homologous receiver domain U068_RS19045 SM00342 helix_turn_helix, arabinose operon control protein U068_RS19065 SM00345 helix_turn_helix gluconate operon transcriptional repressor U068_RS19065 SM00866 U068_RS19065 U068_RS19105 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain U068_RS19120 SM00345 helix_turn_helix gluconate operon transcriptional repressor U068_RS19120 SM00895 U068_RS19120 U068_RS19145 SM00387 Histidine kinase-like ATPases U068_RS19145 SM00433 TopoisomeraseII U068_RS19155 SM00480 DNA polymerase III beta subunit U068_RS19160 SM00382 ATPases associated with a variety of cellular activities U068_RS19160 SM00760 Bacterial dnaA protein helix-turn-helix domain U068_RS19175 SM01234 U068_RS19175 U068_RS19275 SM01061 CAT RNA binding domain U068_RS19285 SM00382 ATPases associated with a variety of cellular activities U068_RS19320 SM00382 ATPases associated with a variety of cellular activities U068_RS19365 SM01228 U068_RS19365 U068_RS19375 SM00344 helix_turn_helix ASNC type U068_RS19385 SM00327 von Willebrand factor (vWF) type A domain U068_RS19390 SM00382 ATPases associated with a variety of cellular activities U068_RS19405 SM00382 ATPases associated with a variety of cellular activities U068_RS19425 SM00354 helix_turn _helix lactose operon repressor U068_RS19435 SM00345 helix_turn_helix gluconate operon transcriptional repressor U068_RS19435 SM00895 U068_RS19435 U068_RS19480 SM00382 ATPases associated with a variety of cellular activities U068_RS19545 SM00487 DEAD-like helicases superfamily U068_RS19545 SM00490 helicase superfamily c-terminal domain U068_RS19560 SM00357 Cold shock protein domain U068_RS19560 SM00382 ATPases associated with a variety of cellular activities U068_RS19560 SM00959 Rho termination factor, N-terminal domain U068_RS19585 SM00984 UDP binding domain U068_RS19690 SM01219 U068_RS19690 U068_RS19765 SM00341 Helicase and RNase D C-terminal U068_RS19765 SM00487 DEAD-like helicases superfamily U068_RS19765 SM00490 helicase superfamily c-terminal domain U068_RS19765 SM00956 U068_RS19765 U068_RS19855 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. U068_RS19950 SM00563 Phosphate acyltransferases U068_RS19960 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs U068_RS19960 SM00474 3'-5' exonuclease U068_RS19960 SM00475 5'-3' exonuclease U068_RS19960 SM00482 DNA polymerase A domain U068_RS19975 SM00729 Elongator protein 3, MiaB family, Radical SAM U068_RS19985 SM00382 ATPases associated with a variety of cellular activities U068_RS19985 SM00448 cheY-homologous receiver domain U068_RS19990 SM00091 PAS domain U068_RS19990 SM00387 Histidine kinase-like ATPases U068_RS19990 SM00388 His Kinase A (phosphoacceptor) domain U068_RS19995 SM01230 U068_RS19995 U068_RS20010 SM00345 helix_turn_helix gluconate operon transcriptional repressor U068_RS20010 SM00866 U068_RS20010 U068_RS20055 SM01133 U068_RS20055 U068_RS20070 SM00420 helix_turn_helix, Deoxyribose operon repressor U068_RS20070 SM01134 U068_RS20070 U068_RS20130 SM00926 Molybdopterin oxidoreductase Fe4S4 domain U068_RS20170 SM01007 Class II Aldolase and Adducin N-terminal domain U068_RS20190 SM00342 helix_turn_helix, arabinose operon control protein U068_RS20195 SM00342 helix_turn_helix, arabinose operon control protein U068_RS20225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U068_RS20225 SM00387 Histidine kinase-like ATPases U068_RS20225 SM00388 His Kinase A (phosphoacceptor) domain U068_RS20230 SM00448 cheY-homologous receiver domain U068_RS20230 SM00862 Transcriptional regulatory protein, C terminal U068_RS20320 SM00382 ATPases associated with a variety of cellular activities U068_RS20320 SM01086 C-terminal, D2-small domain, of ClpB protein U068_RS20335 SM00354 helix_turn _helix lactose operon repressor U068_RS20340 SM00487 DEAD-like helicases superfamily U068_RS20340 SM00490 helicase superfamily c-terminal domain U068_RS20440 SM00342 helix_turn_helix, arabinose operon control protein U068_RS20465 SM00859 Semialdehyde dehydrogenase, NAD binding domain U068_RS20590 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. U068_RS20590 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. U068_RS20595 SM00649 Ribosomal protein L11/L12 U068_RS20620 SM00663 RNA polymerase I subunit A N-terminus U068_RS20630 SM00876 Biotin and Thiamin Synthesis associated domain U068_RS20685 SM00411 bacterial (prokaryotic) histone like domain U068_RS20700 SM00387 Histidine kinase-like ATPases U068_RS20700 SM00388 His Kinase A (phosphoacceptor) domain U068_RS20705 SM00382 ATPases associated with a variety of cellular activities U068_RS20705 SM00448 cheY-homologous receiver domain U068_RS20710 SM01209 U068_RS20710 U068_RS20710 SM01210 U068_RS20710 U068_RS20715 SM00798 AICARFT/IMPCHase bienzyme U068_RS20715 SM00851 MGS-like domain U068_RS20780 SM00248 ankyrin repeats U068_RS20785 SM00346 helix_turn_helix isocitrate lyase regulation U068_RS20790 SM01018 B12 binding domain U068_RS20805 SM00363 S4 RNA-binding domain U068_RS20885 SM00382 ATPases associated with a variety of cellular activities U068_RS20920 SM00563 Phosphate acyltransferases U068_RS20970 SM00829 Enoylreductase U068_RS20975 SM00382 ATPases associated with a variety of cellular activities U068_RS20980 SM01005 Alanine racemase, C-terminal domain U068_RS21025 SM00052 Putative diguanylate phosphodiesterase U068_RS21030 SM00342 helix_turn_helix, arabinose operon control protein U068_RS21035 SM00422 helix_turn_helix, mercury resistance U068_RS21100 SM00028 Tetratricopeptide repeats U068_RS21110 SM00671 Sel1-like repeats. U068_RS21120 SM00926 Molybdopterin oxidoreductase Fe4S4 domain U068_RS21145 SM00849 Metallo-beta-lactamase superfamily U068_RS21165 SM00382 ATPases associated with a variety of cellular activities U068_RS21200 SM00072 Guanylate kinase homologues. U068_RS21210 SM00382 ATPases associated with a variety of cellular activities U068_RS21215 SM00382 ATPases associated with a variety of cellular activities U068_RS21240 SM00345 helix_turn_helix gluconate operon transcriptional repressor U068_RS21240 SM00866 U068_RS21240 U068_RS21255 SM00382 ATPases associated with a variety of cellular activities U068_RS21290 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U068_RS21290 SM00387 Histidine kinase-like ATPases U068_RS21290 SM00388 His Kinase A (phosphoacceptor) domain U068_RS21295 SM00448 cheY-homologous receiver domain U068_RS21295 SM00862 Transcriptional regulatory protein, C terminal U068_RS21310 SM00342 helix_turn_helix, arabinose operon control protein U068_RS21320 SM00342 helix_turn_helix, arabinose operon control protein U068_RS21360 SM00448 cheY-homologous receiver domain U068_RS21365 SM00091 PAS domain U068_RS21365 SM00387 Histidine kinase-like ATPases U068_RS21410 SM00862 Transcriptional regulatory protein, C terminal U068_RS21455 SM00883 Chaperonin 10 Kd subunit U068_RS21480 SM00841 Elongation factor P, C-terminal U068_RS21480 SM01185 U068_RS21480 U068_RS21565 SM00479 U068_RS21565 U068_RS21600 SM00646 U068_RS21600 U068_RS21605 SM00853 MutL C terminal dimerisation domain U068_RS21605 SM01340 U068_RS21605 U068_RS21625 SM00244 prohibitin homologues U068_RS21630 SM00244 prohibitin homologues U068_RS21640 SM00788 Adenylosuccinate synthetase U068_RS21650 SM00316 Ribosomal protein S1-like RNA-binding domain U068_RS21650 SM00357 Cold shock protein domain U068_RS21650 SM00955 U068_RS21650 U068_RS21655 SM00967 RNA 2'-O ribose methyltransferase substrate binding U068_RS21710 SM00420 helix_turn_helix, Deoxyribose operon repressor U068_RS21710 SM01134 U068_RS21710 U068_RS21735 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family U068_RS21745 SM01007 Class II Aldolase and Adducin N-terminal domain U068_RS21850 SM01091 Transporter associated domain U068_RS21880 SM00966 SpoVT / AbrB like domain U068_RS21900 SM00382 ATPases associated with a variety of cellular activities U068_RS21950 SM00642 Alpha-amylase domain U068_RS21960 SM00354 helix_turn _helix lactose operon repressor U068_RS21965 SM00831 Cation transporter/ATPase, N-terminus U068_RS22000 SM00822 U068_RS22000 U068_RS22070 SM00354 helix_turn _helix lactose operon repressor U068_RS22095 SM00829 Enoylreductase U068_RS22190 SM00382 ATPases associated with a variety of cellular activities U068_RS22210 SM00965 Secretin and TonB N terminus short domain U068_RS22260 SM01130 U068_RS22260 U068_RS22265 SM00346 helix_turn_helix isocitrate lyase regulation U068_RS22270 SM00420 helix_turn_helix, Deoxyribose operon repressor U068_RS22270 SM01134 U068_RS22270 U068_RS22435 SM00345 helix_turn_helix gluconate operon transcriptional repressor U068_RS22435 SM00895 U068_RS22435 U068_RS22525 SM00345 helix_turn_helix gluconate operon transcriptional repressor U068_RS22550 SM00382 ATPases associated with a variety of cellular activities U068_RS22570 SM00487 DEAD-like helicases superfamily U068_RS22570 SM00490 helicase superfamily c-terminal domain U068_RS22580 SM00833 Cobalamin synthesis protein cobW C-terminal domain U068_RS22600 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). U068_RS22600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U068_RS22600 SM00319 Homologues of the ligand binding domain of Tar U068_RS22610 SM00895 U068_RS22610 U068_RS22615 SM00829 Enoylreductase U068_RS22630 SM00382 ATPases associated with a variety of cellular activities U068_RS22650 SM00421 helix_turn_helix, Lux Regulon U068_RS22655 SM00421 helix_turn_helix, Lux Regulon U068_RS22710 SM00749 bacterial OsmY and nodulation domain U068_RS22745 SM01133 U068_RS22745 U068_RS22750 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain U068_RS22785 SM00382 ATPases associated with a variety of cellular activities U068_RS22790 SM00530 Helix-turn-helix XRE-family like proteins U068_RS22800 SM00382 ATPases associated with a variety of cellular activities U068_RS22820 SM00855 Phosphoglycerate mutase family U068_RS22825 SM00342 helix_turn_helix, arabinose operon control protein U068_RS22825 SM00871 Bacterial transcription activator, effector binding domain U068_RS22835 SM00448 cheY-homologous receiver domain U068_RS22835 SM00862 Transcriptional regulatory protein, C terminal U068_RS22840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain U068_RS22840 SM00387 Histidine kinase-like ATPases U068_RS22840 SM00388 His Kinase A (phosphoacceptor) domain U068_RS22850 SM00448 cheY-homologous receiver domain U068_RS22850 SM00862 Transcriptional regulatory protein, C terminal