RG54_RS00005	PF00817	impB/mucB/samB family
RG54_RS00005	PF11798	IMS family HHH motif
RG54_RS00005	PF11799	impB/mucB/samB family C-terminal domain
RG54_RS00005	PF13438	RG54_RS00005
RG54_RS00010	PF02600	Disulfide bond formation protein DsbB
RG54_RS00015	PF06450	RG54_RS00015
RG54_RS00020	PF00392	Bacterial regulatory proteins, gntR family
RG54_RS00020	PF07840	FadR C-terminal domain
RG54_RS00025	PF04293	RG54_RS00025
RG54_RS00030	PF01266	FAD dependent oxidoreductase
RG54_RS00035	PF00842	Alanine racemase, C-terminal domain
RG54_RS00035	PF01168	Alanine racemase, N-terminal domain
RG54_RS00040	PF00999	Sodium/hydrogen exchanger family
RG54_RS00040	PF02080	TrkA-C domain
RG54_RS00040	PF03471	Transporter associated domain
RG54_RS00045	PF02016	LD-carboxypeptidase
RG54_RS00055	PF01464	Transglycosylase SLT domain
RG54_RS00060	PF07238	PilZ domain
RG54_RS00060	PF07317	Flagellar regulator YcgR
RG54_RS00065	PF04226	RG54_RS00065
RG54_RS00075	PF01204	Trehalase
RG54_RS00085	PF00381	PTS HPr component phosphorylation site
RG54_RS00085	PF00391	PEP-utilising enzyme, mobile domain
RG54_RS00085	PF03610	PTS system fructose IIA component
RG54_RS00085	PF05524	PEP-utilising enzyme, N-terminal
RG54_RS00090	PF02734	DAK2 domain
RG54_RS00095	PF02733	Dak1 domain
RG54_RS00100	PF00158	Sigma-54 interaction domain
RG54_RS00100	PF00989	PAS fold
RG54_RS00100	PF02954	Bacterial regulatory protein, Fis family
RG54_RS00120	PF01926	50S ribosome-binding GTPase
RG54_RS00120	PF06071	Protein of unknown function (DUF933)
RG54_RS00125	PF01195	Peptidyl-tRNA hydrolase
RG54_RS00130	PF10762	RG54_RS00130
RG54_RS00135	PF00916	RG54_RS00135
RG54_RS00135	PF01740	STAS domain
RG54_RS00140	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
RG54_RS00140	PF14572	Phosphoribosyl synthetase-associated domain
RG54_RS00145	PF00288	GHMP kinases N terminal domain
RG54_RS00145	PF08544	GHMP kinases C terminal
RG54_RS00150	PF03550	Outer membrane lipoprotein LolB
RG54_RS00155	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
RG54_RS00155	PF01488	Shikimate / quinate 5-dehydrogenase
RG54_RS00155	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
RG54_RS00160	PF00472	RF-1 domain
RG54_RS00160	PF03462	PCRF domain
RG54_RS00165	PF13847	Methyltransferase domain
RG54_RS00170	PF04247	RG54_RS00170
RG54_RS00175	PF13369	RG54_RS00175
RG54_RS00175	PF13371	Tetratricopeptide repeat
RG54_RS00180	PF00793	DAHP synthetase I family
RG54_RS00185	PF13940	RG54_RS00185
RG54_RS00195	PF13940	RG54_RS00195
RG54_RS00205	PF13940	RG54_RS00205
RG54_RS00215	PF01699	Sodium/calcium exchanger protein
RG54_RS00220	PF06150	ChaB
RG54_RS00225	PF04752	RG54_RS00225
RG54_RS00230	PF02635	DsrE/DsrF-like family
RG54_RS00235	PF11924	Protein of unknown function (DUF3442)
RG54_RS00240	PF00072	Response regulator receiver domain
RG54_RS00240	PF00196	Bacterial regulatory proteins, luxR family
RG54_RS00245	PF00672	HAMP domain
RG54_RS00245	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS00245	PF07730	Histidine kinase
RG54_RS00245	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
RG54_RS00255	PF07690	Major Facilitator Superfamily
RG54_RS00260	PF00384	Molybdopterin oxidoreductase
RG54_RS00260	PF01568	Molydopterin dinucleotide binding domain
RG54_RS00260	PF14710	Respiratory nitrate reductase alpha N-terminal
RG54_RS00265	PF13247	4Fe-4S dicluster domain
RG54_RS00265	PF14711	Respiratory nitrate reductase beta C-terminal
RG54_RS00270	PF02613	Nitrate reductase delta subunit
RG54_RS00275	PF02665	Nitrate reductase gamma subunit
RG54_RS00295	PF00551	Formyl transferase
RG54_RS00295	PF01842	ACT domain
RG54_RS00300	PF02810	SEC-C motif
RG54_RS00305	PF01734	Patatin-like phospholipase
RG54_RS00310	PF00072	Response regulator receiver domain
RG54_RS00315	PF00483	Nucleotidyl transferase
RG54_RS00320	PF00816	H-NS histone family
RG54_RS00325	PF00265	Thymidine kinase
RG54_RS00335	PF01609	Transposase DDE domain
RG54_RS00345	PF00171	Aldehyde dehydrogenase family
RG54_RS00345	PF00465	Iron-containing alcohol dehydrogenase
RG54_RS00350	PF01914	RG54_RS00350
RG54_RS00360	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RG54_RS00365	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS00370	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS00370	PF12911	RG54_RS00370
RG54_RS00375	PF00005	ABC transporter
RG54_RS00375	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RG54_RS00380	PF00005	ABC transporter
RG54_RS00380	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RG54_RS00385	PF04269	Protein of unknown function, DUF440
RG54_RS00390	PF13091	PLD-like domain
RG54_RS00390	PF13396	RG54_RS00390
RG54_RS00400	PF02254	TrkA-N domain
RG54_RS00400	PF07885	Ion channel
RG54_RS00405	PF03795	YCII-related domain
RG54_RS00410	PF03544	Gram-negative bacterial TonB protein C-terminal
RG54_RS00410	PF16031	RG54_RS00410
RG54_RS00415	PF03061	Thioesterase superfamily
RG54_RS00420	PF04279	RG54_RS00420
RG54_RS00425	PF06790	RG54_RS00425
RG54_RS00435	PF03922	OmpW family
RG54_RS00440	PF05974	Domain of unknown function (DUF892)
RG54_RS00445	PF05974	Domain of unknown function (DUF892)
RG54_RS00450	PF10685	RG54_RS00450
RG54_RS00455	PF00290	Tryptophan synthase alpha chain
RG54_RS00460	PF00291	Pyridoxal-phosphate dependent enzyme
RG54_RS00465	PF00218	Indole-3-glycerol phosphate synthase
RG54_RS00465	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
RG54_RS00470	PF00117	Glutamine amidotransferase class-I
RG54_RS00470	PF00591	Glycosyl transferase family, a/b domain
RG54_RS00470	PF02885	Glycosyl transferase family, helical bundle domain
RG54_RS00475	PF00425	chorismate binding enzyme
RG54_RS00475	PF04715	Anthranilate synthase component I, N terminal region
RG54_RS00480	PF08255	RG54_RS00480
RG54_RS00485	PF02811	PHP domain
RG54_RS00490	PF01300	Telomere recombination
RG54_RS00495	PF00849	RNA pseudouridylate synthase
RG54_RS00495	PF01479	S4 domain
RG54_RS00500	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
RG54_RS00500	PF12557	Cob(I)alamin adenosyltransferase N terminal
RG54_RS00505	PF00106	short chain dehydrogenase
RG54_RS00515	PF01343	Peptidase family S49
RG54_RS00515	PF08496	RG54_RS00515
RG54_RS00520	PF10692	Protein of unknown function (DUF2498)
RG54_RS00525	PF01131	DNA topoisomerase
RG54_RS00525	PF01396	RG54_RS00525
RG54_RS00525	PF01751	Toprim domain
RG54_RS00525	PF08272	Topoisomerase I zinc-ribbon-like
RG54_RS00535	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS00535	PF03466	LysR substrate binding domain
RG54_RS00555	PF00330	Aconitase family (aconitate hydratase)
RG54_RS00555	PF00694	Aconitase C-terminal domain
RG54_RS00560	PF00925	GTP cyclohydrolase II
RG54_RS00565	PF01569	PAP2 superfamily
RG54_RS00570	PF06305	RG54_RS00570
RG54_RS00575	PF14559	Tetratricopeptide repeat
RG54_RS00580	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
RG54_RS00585	PF01253	Translation initiation factor SUI1
RG54_RS00590	PF05433	RG54_RS00590
RG54_RS00595	PF00455	RG54_RS00595
RG54_RS00595	PF08220	DeoR-like helix-turn-helix domain
RG54_RS00605	PF00563	EAL domain
RG54_RS00605	PF00990	GGDEF domain
RG54_RS00605	PF13426	PAS domain
RG54_RS00615	PF00575	S1 RNA binding domain
RG54_RS00615	PF00773	RNB domain
RG54_RS00615	PF08206	Ribonuclease B OB domain
RG54_RS00625	PF13561	Enoyl-(Acyl carrier protein) reductase
RG54_RS00630	PF04480	Protein of unknown function (DUF559)
RG54_RS00635	PF00005	ABC transporter
RG54_RS00640	PF00005	ABC transporter
RG54_RS00640	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RG54_RS00645	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS00645	PF12911	RG54_RS00645
RG54_RS00650	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS00655	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RG54_RS00665	PF10820	RG54_RS00665
RG54_RS00670	PF00324	Amino acid permease
RG54_RS00675	PF00120	Glutamine synthetase, catalytic domain
RG54_RS00680	PF07722	Peptidase C26
RG54_RS00685	PF01381	Helix-turn-helix
RG54_RS00685	PF07883	Cupin domain
RG54_RS00695	PF00171	Aldehyde dehydrogenase family
RG54_RS00700	PF01266	FAD dependent oxidoreductase
RG54_RS00705	PF00202	Aminotransferase class-III
RG54_RS00710	PF00158	Sigma-54 interaction domain
RG54_RS00710	PF02954	Bacterial regulatory protein, Fis family
RG54_RS00715	PF04012	RG54_RS00715
RG54_RS00720	PF06667	RG54_RS00720
RG54_RS00725	PF04024	RG54_RS00725
RG54_RS00730	PF09584	RG54_RS00730
RG54_RS00735	PF00581	Rhodanese-like domain
RG54_RS00740	PF00128	Alpha amylase, catalytic domain
RG54_RS00745	PF01547	Bacterial extracellular solute-binding protein
RG54_RS00750	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS00755	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS00760	PF00107	Zinc-binding dehydrogenase
RG54_RS00765	PF01261	Xylose isomerase-like TIM barrel
RG54_RS00770	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
RG54_RS00770	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
RG54_RS00775	PF03632	Glycosyl hydrolase family 65 central catalytic domain
RG54_RS00775	PF03633	Glycosyl hydrolase family 65, C-terminal domain
RG54_RS00775	PF03636	Glycosyl hydrolase family 65, N-terminal domain
RG54_RS00780	PF13419	Haloacid dehalogenase-like hydrolase
RG54_RS00785	PF00005	ABC transporter
RG54_RS00785	PF08402	TOBE domain
RG54_RS00790	PF09381	Outer membrane protein G (OmpG)
RG54_RS00795	PF00356	Bacterial regulatory proteins, lacI family
RG54_RS00795	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
RG54_RS00800	PF04317	RG54_RS00800
RG54_RS00805	PF05128	RG54_RS00805
RG54_RS00810	PF00158	Sigma-54 interaction domain
RG54_RS00810	PF13188	PAS domain
RG54_RS00815	PF08534	Redoxin
RG54_RS00820	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
RG54_RS00820	PF13378	Enolase C-terminal domain-like
RG54_RS00825	PF00246	Zinc carboxypeptidase
RG54_RS00835	PF12146	Putative lysophospholipase
RG54_RS00840	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS00840	PF03466	LysR substrate binding domain
RG54_RS00850	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RG54_RS00855	PF00924	Mechanosensitive ion channel
RG54_RS00860	PF10749	RG54_RS00860
RG54_RS00865	PF00582	Universal stress protein family
RG54_RS00870	PF00027	Cyclic nucleotide-binding domain
RG54_RS00870	PF13545	Crp-like helix-turn-helix domain
RG54_RS00875	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
RG54_RS00875	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
RG54_RS00880	PF03806	RG54_RS00880
RG54_RS00890	PF01546	Peptidase family M20/M25/M40
RG54_RS00895	PF01546	Peptidase family M20/M25/M40
RG54_RS00895	PF07687	Peptidase dimerisation domain
RG54_RS00900	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS00900	PF03466	LysR substrate binding domain
RG54_RS00905	PF01713	Smr domain
RG54_RS00910	PF00990	GGDEF domain
RG54_RS00910	PF08448	PAS fold
RG54_RS00915	PF01544	CorA-like Mg2+ transporter protein
RG54_RS00925	PF00270	DEAD/DEAH box helicase
RG54_RS00925	PF00271	Helicase conserved C-terminal domain
RG54_RS00925	PF03880	DbpA RNA binding domain
RG54_RS00930	PF01171	PP-loop family
RG54_RS00935	PF00589	Phage integrase family
RG54_RS00935	PF12167	RG54_RS00935
RG54_RS00940	PF06806	Putative excisionase (DUF1233)
RG54_RS00945	PF06688	RG54_RS00945
RG54_RS00950	PF14354	RG54_RS00950
RG54_RS00955	PF03837	RG54_RS00955
RG54_RS00960	PF06630	RG54_RS00960
RG54_RS00960	PF12684	PDDEXK-like domain of unknown function (DUF3799)
RG54_RS00970	PF04181	Rtr1/RPAP2 family
RG54_RS00985	PF14163	RG54_RS00985
RG54_RS00990	PF07151	RG54_RS00990
RG54_RS00995	PF14555	UBA-like domain
RG54_RS01005	PF01381	Helix-turn-helix
RG54_RS01015	PF06254	Protein of unknown function (DUF1019)
RG54_RS01025	PF01695	IstB-like ATP binding protein
RG54_RS01030	PF07789	RG54_RS01030
RG54_RS01035	PF06163	RG54_RS01035
RG54_RS01045	PF00004	ATPase family associated with various cellular activities (AAA)
RG54_RS01050	PF00082	Subtilase family
RG54_RS01055	PF07105	RG54_RS01055
RG54_RS01060	PF07102	Protein of unknown function (DUF1364)
RG54_RS01065	PF06576	RG54_RS01065
RG54_RS01070	PF06519	TolA C-terminal
RG54_RS01075	PF06519	TolA C-terminal
RG54_RS01080	PF04971	RG54_RS01080
RG54_RS01085	PF00959	Phage lysozyme
RG54_RS01090	PF03245	RG54_RS01090
RG54_RS01095	PF02386	Cation transport protein
RG54_RS01105	PF02195	ParB-like nuclease domain
RG54_RS01120	PF03592	Terminase small subunit
RG54_RS01125	PF03237	Terminase-like family
RG54_RS01130	PF13264	RG54_RS01130
RG54_RS01135	PF04233	RG54_RS01135
RG54_RS01145	PF11651	P22 coat protein - gene protein 5
RG54_RS01165	PF13554	Bacteriophage related domain of unknown function
RG54_RS01180	PF06791	RG54_RS01180
RG54_RS01180	PF09718	RG54_RS01180
RG54_RS01185	PF05939	RG54_RS01185
RG54_RS01190	PF05100	RG54_RS01190
RG54_RS01195	PF00877	NlpC/P60 family
RG54_RS01195	PF14464	Prokaryotic homologs of the JAB domain
RG54_RS01200	PF06805	RG54_RS01200
RG54_RS01205	PF09327	RG54_RS01205
RG54_RS01205	PF12421	RG54_RS01205
RG54_RS01205	PF13550	RG54_RS01205
RG54_RS01210	PF06316	Enterobacterial Ail/Lom protein
RG54_RS01215	PF03406	RG54_RS01215
RG54_RS01215	PF07484	Phage Tail Collar Domain
RG54_RS01215	PF08400	RG54_RS01215
RG54_RS01220	PF02413	RG54_RS01220
RG54_RS01225	PF00239	Resolvase, N terminal domain
RG54_RS01225	PF02796	Helix-turn-helix domain of resolvase
RG54_RS01235	PF00582	Universal stress protein family
RG54_RS01240	PF00267	Gram-negative porin
RG54_RS01250	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
RG54_RS01250	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
RG54_RS01250	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
RG54_RS01250	PF10371	Domain of unknown function
RG54_RS01250	PF13484	RG54_RS01250
RG54_RS01250	PF17147	RG54_RS01250
RG54_RS01255	PF03891	RG54_RS01255
RG54_RS01260	PF03724	META domain
RG54_RS01265	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
RG54_RS01265	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
RG54_RS01270	PF11739	RG54_RS01270
RG54_RS01275	PF13617	RG54_RS01275
RG54_RS01280	PF07027	RG54_RS01280
RG54_RS01285	PF12833	Helix-turn-helix domain
RG54_RS01285	PF14525	RG54_RS01285
RG54_RS01290	PF00171	Aldehyde dehydrogenase family
RG54_RS01295	PF01179	Copper amine oxidase, enzyme domain
RG54_RS01295	PF02727	Copper amine oxidase, N2 domain
RG54_RS01295	PF02728	Copper amine oxidase, N3 domain
RG54_RS01295	PF07833	Copper amine oxidase N-terminal domain
RG54_RS01300	PF00171	Aldehyde dehydrogenase family
RG54_RS01300	PF01575	MaoC like domain
RG54_RS01305	PF05138	Phenylacetic acid catabolic protein
RG54_RS01310	PF06243	Phenylacetic acid degradation B
RG54_RS01315	PF05138	Phenylacetic acid catabolic protein
RG54_RS01320	PF01883	Domain of unknown function DUF59
RG54_RS01325	PF00111	2Fe-2S iron-sulfur cluster binding domain
RG54_RS01325	PF00175	Oxidoreductase NAD-binding domain
RG54_RS01325	PF00970	Oxidoreductase FAD-binding domain
RG54_RS01330	PF00378	Enoyl-CoA hydratase/isomerase family
RG54_RS01335	PF00378	Enoyl-CoA hydratase/isomerase family
RG54_RS01340	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
RG54_RS01340	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
RG54_RS01345	PF03061	Thioesterase superfamily
RG54_RS01350	PF00108	Thiolase, N-terminal domain
RG54_RS01350	PF02803	Thiolase, C-terminal domain
RG54_RS01355	PF00501	AMP-binding enzyme
RG54_RS01355	PF14535	AMP-binding enzyme C-terminal domain
RG54_RS01360	PF07848	PaaX-like protein
RG54_RS01360	PF08223	PaaX-like protein C-terminal domain
RG54_RS01365	PF00132	Bacterial transferase hexapeptide (six repeats)
RG54_RS01370	PF00248	Aldo/keto reductase family
RG54_RS01380	PF10971	RG54_RS01380
RG54_RS01385	PF01066	CDP-alcohol phosphatidyltransferase
RG54_RS01390	PF01148	Cytidylyltransferase family
RG54_RS01395	PF12146	Putative lysophospholipase
RG54_RS01395	PF12147	RG54_RS01395
RG54_RS01400	PF00782	Dual specificity phosphatase, catalytic domain
RG54_RS01405	PF02525	Flavodoxin-like fold
RG54_RS01410	PF00270	DEAD/DEAH box helicase
RG54_RS01410	PF00271	Helicase conserved C-terminal domain
RG54_RS01410	PF04408	Helicase associated domain (HA2)
RG54_RS01410	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
RG54_RS01410	PF11898	RG54_RS01410
RG54_RS01415	PF02698	DUF218 domain
RG54_RS01420	PF00171	Aldehyde dehydrogenase family
RG54_RS01425	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
RG54_RS01425	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
RG54_RS01430	PF01292	Prokaryotic cytochrome b561
RG54_RS01440	PF01848	RG54_RS01440
RG54_RS01445	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RG54_RS01445	PF00672	HAMP domain
RG54_RS01445	PF02203	Tar ligand binding domain homologue
RG54_RS01450	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS01450	PF03466	LysR substrate binding domain
RG54_RS01455	PF07063	Domain of unknown function (DUF1338)
RG54_RS01465	PF04349	Periplasmic glucan biosynthesis protein, MdoG
RG54_RS01475	PF04325	Protein of unknown function (DUF465)
RG54_RS01480	PF13302	Acetyltransferase (GNAT) domain
RG54_RS01490	PF03595	Voltage-dependent anion channel
RG54_RS01495	PF03848	Tellurite resistance protein TehB
RG54_RS01500	PF11769	RG54_RS01500
RG54_RS01510	PF01385	RG54_RS01510
RG54_RS01510	PF07282	RG54_RS01510
RG54_RS01510	PF12323	RG54_RS01510
RG54_RS01515	PF03594	RG54_RS01515
RG54_RS01520	PF01381	Helix-turn-helix
RG54_RS01520	PF07883	Cupin domain
RG54_RS01525	PF01136	RG54_RS01525
RG54_RS01525	PF12392	RG54_RS01525
RG54_RS01530	PF10829	RG54_RS01530
RG54_RS01535	PF07927	YcfA-like protein
RG54_RS01540	PF01381	Helix-turn-helix
RG54_RS01540	PF15919	RG54_RS01540
RG54_RS01545	PF00155	Aminotransferase class I and II
RG54_RS01545	PF00392	Bacterial regulatory proteins, gntR family
RG54_RS01550	PF13416	Bacterial extracellular solute-binding protein
RG54_RS01555	PF00005	ABC transporter
RG54_RS01555	PF08402	TOBE domain
RG54_RS01560	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS01565	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS01570	PF00171	Aldehyde dehydrogenase family
RG54_RS01585	PF10753	RG54_RS01585
RG54_RS01590	PF10735	RG54_RS01590
RG54_RS01595	PF04657	RG54_RS01595
RG54_RS01600	PF13420	Acetyltransferase (GNAT) domain
RG54_RS01610	PF00107	Zinc-binding dehydrogenase
RG54_RS01610	PF16884	RG54_RS01610
RG54_RS01615	PF00392	Bacterial regulatory proteins, gntR family
RG54_RS01615	PF07729	FCD domain
RG54_RS01620	PF00593	TonB dependent receptor
RG54_RS01620	PF07715	TonB-dependent Receptor Plug Domain
RG54_RS01640	PF00324	Amino acid permease
RG54_RS01660	PF05954	Phage late control gene D protein (GPD)
RG54_RS01665	PF08786	Domain of unknown function (DUF1795)
RG54_RS01670	PF03527	RG54_RS01670
RG54_RS01670	PF05593	RG54_RS01670
RG54_RS01680	PF08845	RG54_RS01680
RG54_RS01690	PF01361	Tautomerase enzyme
RG54_RS01695	PF01613	Flavin reductase like domain
RG54_RS01700	PF00797	N-acetyltransferase
RG54_RS01705	PF02567	Phenazine biosynthesis-like protein
RG54_RS01710	PF02665	Nitrate reductase gamma subunit
RG54_RS01715	PF02613	Nitrate reductase delta subunit
RG54_RS01720	PF13247	4Fe-4S dicluster domain
RG54_RS01720	PF14711	Respiratory nitrate reductase beta C-terminal
RG54_RS01725	PF00384	Molybdopterin oxidoreductase
RG54_RS01725	PF01568	Molydopterin dinucleotide binding domain
RG54_RS01725	PF14710	Respiratory nitrate reductase alpha N-terminal
RG54_RS01730	PF07690	Major Facilitator Superfamily
RG54_RS01740	PF00267	Gram-negative porin
RG54_RS01745	PF00892	EamA-like transporter family
RG54_RS01750	PF00384	Molybdopterin oxidoreductase
RG54_RS01750	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
RG54_RS01755	PF00384	Molybdopterin oxidoreductase
RG54_RS01755	PF01568	Molydopterin dinucleotide binding domain
RG54_RS01760	PF09163	Formate dehydrogenase N, transmembrane
RG54_RS01760	PF12800	4Fe-4S binding domain
RG54_RS01760	PF13247	4Fe-4S dicluster domain
RG54_RS01765	PF01292	Prokaryotic cytochrome b561
RG54_RS01770	PF01381	Helix-turn-helix
RG54_RS01775	PF00107	Zinc-binding dehydrogenase
RG54_RS01775	PF08240	Alcohol dehydrogenase GroES-like domain
RG54_RS01780	PF00390	Malic enzyme, N-terminal domain
RG54_RS01780	PF03949	Malic enzyme, NAD binding domain
RG54_RS01785	PF08136	RG54_RS01785
RG54_RS01790	PF10684	RG54_RS01790
RG54_RS01800	PF02566	OsmC-like protein
RG54_RS01805	PF00005	ABC transporter
RG54_RS01805	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RG54_RS01810	PF00005	ABC transporter
RG54_RS01810	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RG54_RS01815	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS01815	PF12911	RG54_RS01815
RG54_RS01820	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS01830	PF01427	D-ala-D-ala dipeptidase
RG54_RS01835	PF00563	EAL domain
RG54_RS01835	PF00990	GGDEF domain
RG54_RS01835	PF13426	PAS domain
RG54_RS01840	PF00990	GGDEF domain
RG54_RS01840	PF11563	Protoglobin
RG54_RS01845	PF02638	RG54_RS01845
RG54_RS01850	PF13520	Amino acid permease
RG54_RS01855	PF00282	Pyridoxal-dependent decarboxylase conserved domain
RG54_RS01870	PF00675	Insulinase (Peptidase family M16)
RG54_RS01870	PF05193	Peptidase M16 inactive domain
RG54_RS01875	PF07715	TonB-dependent Receptor Plug Domain
RG54_RS01880	PF00005	ABC transporter
RG54_RS01880	PF06472	RG54_RS01880
RG54_RS01885	PF04055	Radical SAM superfamily
RG54_RS01885	PF13186	Iron-sulfur cluster-binding domain
RG54_RS01885	PF13353	4Fe-4S single cluster domain
RG54_RS01890	PF00884	Sulfatase
RG54_RS01895	PF12833	Helix-turn-helix domain
RG54_RS01900	PF17073	RG54_RS01900
RG54_RS01905	PF00384	Molybdopterin oxidoreductase
RG54_RS01905	PF01568	Molydopterin dinucleotide binding domain
RG54_RS01910	PF09160	FimH, mannose binding
RG54_RS01920	PF00419	Fimbrial protein
RG54_RS01925	PF00577	Outer membrane usher protein
RG54_RS01925	PF13953	PapC C-terminal domain
RG54_RS01925	PF13954	PapC N-terminal domain
RG54_RS01930	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
RG54_RS01930	PF02753	Pili assembly chaperone PapD, C-terminal domain
RG54_RS01935	PF00419	Fimbrial protein
RG54_RS01955	PF07804	HipA-like C-terminal domain
RG54_RS01955	PF07805	HipA-like N-terminal domain
RG54_RS01955	PF13657	HipA N-terminal domain
RG54_RS01960	PF01381	Helix-turn-helix
RG54_RS01965	PF03212	Pertactin
RG54_RS01965	PF03797	Autotransporter beta-domain
RG54_RS01965	PF13018	RG54_RS01965
RG54_RS01970	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
RG54_RS01970	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
RG54_RS01975	PF04198	Putative sugar-binding domain
RG54_RS01980	PF00005	ABC transporter
RG54_RS01985	PF02653	RG54_RS01985
RG54_RS01990	PF02653	RG54_RS01990
RG54_RS01995	PF13407	Periplasmic binding protein domain
RG54_RS02000	PF01791	DeoC/LacD family aldolase
RG54_RS02005	PF03992	Antibiotic biosynthesis monooxygenase
RG54_RS02010	PF13649	Methyltransferase domain
RG54_RS02015	PF01062	RG54_RS02015
RG54_RS02025	PF01232	Mannitol dehydrogenase Rossmann domain
RG54_RS02025	PF08125	Mannitol dehydrogenase C-terminal domain
RG54_RS02035	PF00990	GGDEF domain
RG54_RS02040	PF13811	RG54_RS02040
RG54_RS02045	PF04960	Glutaminase
RG54_RS02050	PF00171	Aldehyde dehydrogenase family
RG54_RS02055	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS02055	PF03466	LysR substrate binding domain
RG54_RS02075	PF07690	Major Facilitator Superfamily
RG54_RS02080	PF01914	RG54_RS02080
RG54_RS02085	PF01047	MarR family
RG54_RS02090	PF12833	Helix-turn-helix domain
RG54_RS02095	PF13999	RG54_RS02095
RG54_RS02100	PF00232	Glycosyl hydrolase family 1
RG54_RS02105	PF02264	LamB porin
RG54_RS02105	PF11471	RG54_RS02105
RG54_RS02110	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
RG54_RS02120	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
RG54_RS02125	PF00392	Bacterial regulatory proteins, gntR family
RG54_RS02125	PF07702	UTRA domain
RG54_RS02130	PF00892	EamA-like transporter family
RG54_RS02135	PF07690	Major Facilitator Superfamily
RG54_RS02145	PF00990	GGDEF domain
RG54_RS02145	PF13682	Chemoreceptor zinc-binding domain
RG54_RS02150	PF04076	Bacterial OB fold (BOF) protein
RG54_RS02155	PF02464	Competence-damaged protein
RG54_RS02165	PF01432	Peptidase family M3
RG54_RS02175	PF00106	short chain dehydrogenase
RG54_RS02180	PF00392	Bacterial regulatory proteins, gntR family
RG54_RS02180	PF07729	FCD domain
RG54_RS02185	PF14001	RG54_RS02185
RG54_RS02190	PF01232	Mannitol dehydrogenase Rossmann domain
RG54_RS02190	PF08125	Mannitol dehydrogenase C-terminal domain
RG54_RS02195	PF07690	Major Facilitator Superfamily
RG54_RS02200	PF00107	Zinc-binding dehydrogenase
RG54_RS02200	PF08240	Alcohol dehydrogenase GroES-like domain
RG54_RS02205	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
RG54_RS02205	PF13378	Enolase C-terminal domain-like
RG54_RS02215	PF02694	RG54_RS02215
RG54_RS02220	PF06932	RG54_RS02220
RG54_RS02225	PF13302	Acetyltransferase (GNAT) domain
RG54_RS02230	PF06788	RG54_RS02230
RG54_RS02235	PF06649	RG54_RS02235
RG54_RS02240	PF00384	Molybdopterin oxidoreductase
RG54_RS02240	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
RG54_RS02245	PF00384	Molybdopterin oxidoreductase
RG54_RS02245	PF01568	Molydopterin dinucleotide binding domain
RG54_RS02250	PF00384	Molybdopterin oxidoreductase
RG54_RS02250	PF01568	Molydopterin dinucleotide binding domain
RG54_RS02250	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
RG54_RS02255	PF12800	4Fe-4S binding domain
RG54_RS02255	PF13247	4Fe-4S dicluster domain
RG54_RS02260	PF04976	RG54_RS02260
RG54_RS02265	PF02613	Nitrate reductase delta subunit
RG54_RS02270	PF00654	Voltage gated chloride channel
RG54_RS02275	PF13500	AAA domain
RG54_RS02280	PF00480	ROK family
RG54_RS02285	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS02285	PF03466	LysR substrate binding domain
RG54_RS02290	PF07690	Major Facilitator Superfamily
RG54_RS02310	PF00089	Trypsin
RG54_RS02315	PF00893	Small Multidrug Resistance protein
RG54_RS02320	PF00893	Small Multidrug Resistance protein
RG54_RS02325	PF01594	RG54_RS02325
RG54_RS02330	PF02233	NAD(P) transhydrogenase beta subunit
RG54_RS02335	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
RG54_RS02335	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
RG54_RS02335	PF12769	Domain of unknown function (DUF3814)
RG54_RS02340	PF07338	Protein of unknown function (DUF1471)
RG54_RS02350	PF13520	Amino acid permease
RG54_RS02355	PF13561	Enoyl-(Acyl carrier protein) reductase
RG54_RS02360	PF06942	RG54_RS02360
RG54_RS02365	PF00072	Response regulator receiver domain
RG54_RS02365	PF00486	Transcriptional regulatory protein, C terminal
RG54_RS02370	PF00512	His Kinase A (phospho-acceptor) domain
RG54_RS02370	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS02375	PF05472	DNA replication terminus site-binding protein (Ter protein)
RG54_RS02380	PF00206	Lyase
RG54_RS02380	PF10415	Fumarase C C-terminus
RG54_RS02385	PF05681	RG54_RS02385
RG54_RS02385	PF05683	Fumarase C-terminus
RG54_RS02390	PF01238	Phosphomannose isomerase type I
RG54_RS02395	PF06097	RG54_RS02395
RG54_RS02400	PF03573	outer membrane porin, OprD family
RG54_RS02410	PF00703	Glycosyl hydrolases family 2
RG54_RS02410	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
RG54_RS02410	PF02837	Glycosyl hydrolases family 2, sugar binding domain
RG54_RS02415	PF00440	Bacterial regulatory proteins, tetR family
RG54_RS02420	PF13561	Enoyl-(Acyl carrier protein) reductase
RG54_RS02425	PF00356	Bacterial regulatory proteins, lacI family
RG54_RS02425	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
RG54_RS02430	PF00367	phosphotransferase system, EIIB
RG54_RS02430	PF02378	Phosphotransferase system, EIIC
RG54_RS02435	PF00155	Aminotransferase class I and II
RG54_RS02440	PF00962	Adenosine/AMP deaminase
RG54_RS02445	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
RG54_RS02445	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
RG54_RS02460	PF05321	Haemolysin expression modulating protein
RG54_RS02465	PF10754	RG54_RS02465
RG54_RS02470	PF02508	RG54_RS02470
RG54_RS02475	PF04060	Putative Fe-S cluster
RG54_RS02475	PF14697	4Fe-4S dicluster domain
RG54_RS02480	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
RG54_RS02480	PF10531	SLBB domain
RG54_RS02480	PF12838	4Fe-4S dicluster domain
RG54_RS02480	PF13375	RnfC Barrel sandwich hybrid domain
RG54_RS02485	PF03116	RG54_RS02485
RG54_RS02490	PF04205	FMN-binding domain
RG54_RS02495	PF02508	RG54_RS02495
RG54_RS02500	PF00633	Helix-hairpin-helix motif
RG54_RS02500	PF00730	HhH-GPD superfamily base excision DNA repair protein
RG54_RS02500	PF10576	Iron-sulfur binding domain of endonuclease III
RG54_RS02510	PF00854	POT family
RG54_RS02515	PF00043	Glutathione S-transferase, C-terminal domain
RG54_RS02515	PF02798	Glutathione S-transferase, N-terminal domain
RG54_RS02520	PF08543	Phosphomethylpyrimidine kinase
RG54_RS02525	PF00579	tRNA synthetases class I (W and Y)
RG54_RS02525	PF01479	S4 domain
RG54_RS02530	PF01243	Pyridoxamine 5'-phosphate oxidase
RG54_RS02530	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
RG54_RS02535	PF09864	Membrane-bound lysozyme-inhibitor of c-type lysozyme
RG54_RS02540	PF03702	Uncharacterised protein family (UPF0075)
RG54_RS02545	PF05433	RG54_RS02545
RG54_RS02550	PF01047	MarR family
RG54_RS02555	PF07869	RG54_RS02555
RG54_RS02560	PF00529	HlyD family secretion protein
RG54_RS02560	PF16576	RG54_RS02560
RG54_RS02565	PF04632	RG54_RS02565
RG54_RS02570	PF00080	Copper/zinc superoxide dismutase (SODC)
RG54_RS02575	PF00248	Aldo/keto reductase family
RG54_RS02580	PF06945	RG54_RS02580
RG54_RS02585	PF00440	Bacterial regulatory proteins, tetR family
RG54_RS02585	PF16925	RG54_RS02585
RG54_RS02590	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
RG54_RS02595	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
RG54_RS02600	PF00929	Exonuclease
RG54_RS02605	PF00270	DEAD/DEAH box helicase
RG54_RS02605	PF00271	Helicase conserved C-terminal domain
RG54_RS02605	PF08494	RG54_RS02605
RG54_RS02610	PF00462	Glutaredoxin
RG54_RS02615	PF00877	NlpC/P60 family
RG54_RS02620	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
RG54_RS02620	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
RG54_RS02625	PF07690	Major Facilitator Superfamily
RG54_RS02640	PF00356	Bacterial regulatory proteins, lacI family
RG54_RS02640	PF13377	Periplasmic binding protein-like domain
RG54_RS02645	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS02645	PF03466	LysR substrate binding domain
RG54_RS02650	PF07690	Major Facilitator Superfamily
RG54_RS02655	PF02353	Mycolic acid cyclopropane synthetase
RG54_RS02660	PF00677	Lumazine binding domain
RG54_RS02665	PF01554	MatE
RG54_RS02670	PF03212	Pertactin
RG54_RS02670	PF16168	RG54_RS02670
RG54_RS02685	PF08803	Putative mono-oxygenase ydhR
RG54_RS02690	PF13454	FAD-NAD(P)-binding
RG54_RS02700	PF01292	Prokaryotic cytochrome b561
RG54_RS02705	PF13247	4Fe-4S dicluster domain
RG54_RS02715	PF01314	Aldehyde ferredoxin oxidoreductase, domains 2 & 3
RG54_RS02715	PF02730	Aldehyde ferredoxin oxidoreductase, N-terminal domain
RG54_RS02720	PF12800	4Fe-4S binding domain
RG54_RS02720	PF13247	4Fe-4S dicluster domain
RG54_RS02725	PF10965	RG54_RS02725
RG54_RS02730	PF00224	Pyruvate kinase, barrel domain
RG54_RS02730	PF02887	Pyruvate kinase, alpha/beta domain
RG54_RS02735	PF04728	Lipoprotein leucine-zipper
RG54_RS02740	PF01476	LysM domain
RG54_RS02740	PF03734	L,D-transpeptidase catalytic domain
RG54_RS02745	PF02657	Fe-S metabolism associated domain
RG54_RS02750	PF00266	Aminotransferase class-V
RG54_RS02755	PF01458	Uncharacterized protein family (UPF0051)
RG54_RS02760	PF00005	ABC transporter
RG54_RS02765	PF01458	Uncharacterized protein family (UPF0051)
RG54_RS02770	PF01521	Iron-sulphur cluster biosynthesis
RG54_RS02775	PF15930	RG54_RS02775
RG54_RS02780	PF03061	Thioesterase superfamily
RG54_RS02785	PF01565	FAD binding domain
RG54_RS02785	PF02913	FAD linked oxidases, C-terminal domain
RG54_RS02785	PF13183	4Fe-4S dicluster domain
RG54_RS02790	PF01594	RG54_RS02790
RG54_RS02800	PF08965	Domain of unknown function (DUF1870)
RG54_RS02805	PF07690	Major Facilitator Superfamily
RG54_RS02810	PF07690	Major Facilitator Superfamily
RG54_RS02815	PF08501	Shikimate dehydrogenase substrate binding domain
RG54_RS02820	PF01487	Type I 3-dehydroquinase
RG54_RS02825	PF01144	Coenzyme A transferase
RG54_RS02830	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
RG54_RS02830	PF02770	Acyl-CoA dehydrogenase, middle domain
RG54_RS02830	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
RG54_RS02845	PF01012	Electron transfer flavoprotein domain
RG54_RS02850	PF00766	Electron transfer flavoprotein FAD-binding domain
RG54_RS02850	PF01012	Electron transfer flavoprotein domain
RG54_RS02855	PF01494	FAD binding domain
RG54_RS02865	PF00501	AMP-binding enzyme
RG54_RS02865	PF13193	AMP-binding enzyme C-terminal domain
RG54_RS02870	PF00391	PEP-utilising enzyme, mobile domain
RG54_RS02870	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
RG54_RS02870	PF02896	PEP-utilising enzyme, TIM barrel domain
RG54_RS02875	PF03618	RG54_RS02875
RG54_RS02880	PF00793	DAHP synthetase I family
RG54_RS02885	PF10636	Hemin uptake protein hemP
RG54_RS02890	PF02696	RG54_RS02890
RG54_RS02895	PF00563	EAL domain
RG54_RS02900	PF00877	NlpC/P60 family
RG54_RS02905	PF00005	ABC transporter
RG54_RS02910	PF00255	Glutathione peroxidase
RG54_RS02915	PF01032	FecCD transport family
RG54_RS02920	PF00216	Bacterial DNA-binding protein
RG54_RS02925	PF01588	Putative tRNA binding domain
RG54_RS02925	PF03147	Ferredoxin-fold anticodon binding domain
RG54_RS02925	PF03483	B3/4 domain
RG54_RS02925	PF03484	tRNA synthetase B5 domain
RG54_RS02930	PF01409	tRNA synthetases class II core domain (F)
RG54_RS02930	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
RG54_RS02945	PF00453	Ribosomal protein L20
RG54_RS02950	PF01632	Ribosomal protein L35
RG54_RS02955	PF00707	Translation initiation factor IF-3, C-terminal domain
RG54_RS02955	PF05198	Translation initiation factor IF-3, N-terminal domain
RG54_RS02960	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
RG54_RS02960	PF02824	TGS domain
RG54_RS02960	PF03129	Anticodon binding domain
RG54_RS02960	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
RG54_RS02975	PF04338	Protein of unknown function, DUF481
RG54_RS02980	PF00294	pfkB family carbohydrate kinase
RG54_RS02985	PF11080	Protein of unknown function (DUF2622)
RG54_RS02990	PF03881	Fructosamine kinase
RG54_RS02995	PF14002	RG54_RS02995
RG54_RS03000	PF13419	Haloacid dehalogenase-like hydrolase
RG54_RS03005	PF04307	RG54_RS03005
RG54_RS03010	PF00375	Sodium:dicarboxylate symporter family
RG54_RS03020	PF10729	Cell division activator CedA
RG54_RS03025	PF00199	Catalase
RG54_RS03025	PF06628	Catalase-related immune-responsive
RG54_RS03030	PF04794	YdjC-like protein
RG54_RS03035	PF02056	Family 4 glycosyl hydrolase
RG54_RS03035	PF11975	Family 4 glycosyl hydrolase C-terminal domain
RG54_RS03040	PF07883	Cupin domain
RG54_RS03040	PF12833	Helix-turn-helix domain
RG54_RS03045	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
RG54_RS03050	PF02378	Phosphotransferase system, EIIC
RG54_RS03055	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
RG54_RS03065	PF04355	SmpA / OmlA family
RG54_RS03070	PF02540	NAD synthase
RG54_RS03080	PF05962	HutD
RG54_RS03085	PF07813	LTXXQ motif family protein
RG54_RS03090	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
RG54_RS03095	PF04996	Succinylarginine dihydrolase
RG54_RS03100	PF00171	Aldehyde dehydrogenase family
RG54_RS03105	PF04958	Arginine N-succinyltransferase beta subunit
RG54_RS03110	PF00202	Aminotransferase class-III
RG54_RS03120	PF03372	Endonuclease/Exonuclease/phosphatase family
RG54_RS03125	PF09335	RG54_RS03125
RG54_RS03135	PF09335	RG54_RS03135
RG54_RS03140	PF02627	Carboxymuconolactone decarboxylase family
RG54_RS03145	PF13416	Bacterial extracellular solute-binding protein
RG54_RS03150	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS03155	PF00005	ABC transporter
RG54_RS03160	PF00581	Rhodanese-like domain
RG54_RS03165	PF01066	CDP-alcohol phosphatidyltransferase
RG54_RS03170	PF00293	NUDIX domain
RG54_RS03175	PF07383	RG54_RS03175
RG54_RS03180	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
RG54_RS03180	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
RG54_RS03190	PF01131	DNA topoisomerase
RG54_RS03190	PF01751	Toprim domain
RG54_RS03195	PF00586	AIR synthase related protein, N-terminal domain
RG54_RS03195	PF02769	AIR synthase related protein, C-terminal domain
RG54_RS03205	PF00881	Nitroreductase family
RG54_RS03210	PF01343	Peptidase family S49
RG54_RS03215	PF00710	Asparaginase
RG54_RS03220	PF00857	Isochorismatase family
RG54_RS03225	PF07023	RG54_RS03225
RG54_RS03230	PF01641	SelR domain
RG54_RS03235	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
RG54_RS03235	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
RG54_RS03240	PF01263	Aldose 1-epimerase
RG54_RS03245	PF00248	Aldo/keto reductase family
RG54_RS03250	PF06629	RG54_RS03250
RG54_RS03255	PF06798	RG54_RS03255
RG54_RS03255	PF08298	PrkA AAA domain
RG54_RS03260	PF04285	RG54_RS03260
RG54_RS03265	PF00990	GGDEF domain
RG54_RS03265	PF17158	RG54_RS03265
RG54_RS03270	PF00990	GGDEF domain
RG54_RS03270	PF17155	RG54_RS03270
RG54_RS03275	PF04073	Aminoacyl-tRNA editing domain
RG54_RS03285	PF04284	RG54_RS03285
RG54_RS03290	PF02311	AraC-like ligand binding domain
RG54_RS03290	PF12833	Helix-turn-helix domain
RG54_RS03300	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
RG54_RS03300	PF01844	HNH endonuclease
RG54_RS03300	PF08388	RG54_RS03300
RG54_RS03300	PF13655	RG54_RS03300
RG54_RS03310	PF07690	Major Facilitator Superfamily
RG54_RS03315	PF04343	RG54_RS03315
RG54_RS03320	PF03891	RG54_RS03320
RG54_RS03325	PF00990	GGDEF domain
RG54_RS03325	PF13185	GAF domain
RG54_RS03340	PF04226	RG54_RS03340
RG54_RS03345	PF01385	RG54_RS03345
RG54_RS03345	PF07282	RG54_RS03345
RG54_RS03345	PF12323	RG54_RS03345
RG54_RS03350	PF01797	Transposase IS200 like
RG54_RS03360	PF08956	Domain of unknown function (DUF1869)
RG54_RS03365	PF09313	Domain of unknown function (DUF1971)
RG54_RS03370	PF01810	RG54_RS03370
RG54_RS03375	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS03375	PF03466	LysR substrate binding domain
RG54_RS03380	PF00180	Isocitrate/isopropylmalate dehydrogenase
RG54_RS03385	PF02028	BCCT family transporter
RG54_RS03390	PF00355	Rieske [2Fe-2S] domain
RG54_RS03390	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
RG54_RS03395	PF00111	2Fe-2S iron-sulfur cluster binding domain
RG54_RS03395	PF00175	Oxidoreductase NAD-binding domain
RG54_RS03395	PF00970	Oxidoreductase FAD-binding domain
RG54_RS03400	PF00570	HRDC domain
RG54_RS03400	PF01612	3'-5' exonuclease
RG54_RS03405	PF00501	AMP-binding enzyme
RG54_RS03405	PF13193	AMP-binding enzyme C-terminal domain
RG54_RS03410	PF03843	RG54_RS03410
RG54_RS03415	PF00814	Glycoprotease family
RG54_RS03420	PF04851	Type III restriction enzyme, res subunit
RG54_RS03420	PF13307	Helicase C-terminal domain
RG54_RS03425	PF01042	Endoribonuclease L-PSP
RG54_RS03435	PF08986	Domain of unknown function (DUF1889)
RG54_RS03440	PF03701	RG54_RS03440
RG54_RS03445	PF00425	chorismate binding enzyme
RG54_RS03445	PF04715	Anthranilate synthase component I, N terminal region
RG54_RS03450	PF00293	NUDIX domain
RG54_RS03455	PF03313	RG54_RS03455
RG54_RS03455	PF03315	Serine dehydratase beta chain
RG54_RS03460	PF00563	EAL domain
RG54_RS03460	PF12792	RG54_RS03460
RG54_RS03465	PF03471	Transporter associated domain
RG54_RS03465	PF03741	RG54_RS03465
RG54_RS03480	PF03610	PTS system fructose IIA component
RG54_RS03480	PF03830	PTS system sorbose subfamily IIB component
RG54_RS03485	PF03609	RG54_RS03485
RG54_RS03490	PF03613	RG54_RS03490
RG54_RS03495	PF06173	RG54_RS03495
RG54_RS03505	PF02659	RG54_RS03505
RG54_RS03510	PF13847	Methyltransferase domain
RG54_RS03515	PF00313	'Cold-shock' DNA-binding domain
RG54_RS03520	PF10736	RG54_RS03520
RG54_RS03530	PF13974	RG54_RS03530
RG54_RS03535	PF13998	RG54_RS03535
RG54_RS03540	PF13996	RG54_RS03540
RG54_RS03545	PF01614	Bacterial transcriptional regulator
RG54_RS03545	PF09339	IclR helix-turn-helix domain
RG54_RS03550	PF07690	Major Facilitator Superfamily
RG54_RS03555	PF01435	Peptidase family M48
RG54_RS03560	PF00595	PDZ domain (Also known as DHR or GLGF)
RG54_RS03560	PF03572	Peptidase family S41
RG54_RS03560	PF11818	RG54_RS03560
RG54_RS03565	PF04352	ProQ/FINO family
RG54_RS03570	PF13185	GAF domain
RG54_RS03575	PF04403	RG54_RS03575
RG54_RS03580	PF02470	RG54_RS03580
RG54_RS03585	PF01189	NOL1/NOP2/sun family
RG54_RS03585	PF13636	pre-rRNA processing and ribosome biogenesis
RG54_RS03585	PF17125	RG54_RS03585
RG54_RS03590	PF07351	RG54_RS03590
RG54_RS03595	PF07358	RG54_RS03595
RG54_RS03600	PF00149	Calcineurin-like phosphoesterase
RG54_RS03610	PF10709	RG54_RS03610
RG54_RS03615	PF05425	RG54_RS03615
RG54_RS03620	PF04234	CopC domain
RG54_RS03625	PF06440	DNA polymerase III, theta subunit
RG54_RS03630	PF00795	Carbon-nitrogen hydrolase
RG54_RS03635	PF00929	Exonuclease
RG54_RS03640	PF00326	Prolyl oligopeptidase family
RG54_RS03640	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
RG54_RS03650	PF04391	RG54_RS03650
RG54_RS03665	PF13995	YebF-like protein
RG54_RS03670	PF07130	YebG protein
RG54_RS03675	PF02222	ATP-grasp domain
RG54_RS03680	PF01081	KDPG and KHG aldolase
RG54_RS03685	PF00920	Dehydratase family
RG54_RS03690	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
RG54_RS03690	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
RG54_RS03705	PF01380	SIS domain
RG54_RS03705	PF01418	Helix-turn-helix domain, rpiR family
RG54_RS03710	PF00224	Pyruvate kinase, barrel domain
RG54_RS03710	PF02887	Pyruvate kinase, alpha/beta domain
RG54_RS03715	PF03279	RG54_RS03715
RG54_RS03720	PF01476	LysM domain
RG54_RS03720	PF01551	Peptidase family M23
RG54_RS03720	PF08525	RG54_RS03720
RG54_RS03725	PF01297	Periplasmic solute binding protein family
RG54_RS03730	PF00005	ABC transporter
RG54_RS03735	PF00950	RG54_RS03735
RG54_RS03740	PF05491	Holliday junction DNA helicase ruvB C-terminus
RG54_RS03740	PF05496	Holliday junction DNA helicase ruvB N-terminus
RG54_RS03745	PF01330	RuvA N terminal domain
RG54_RS03745	PF07499	RuvA, C-terminal domain
RG54_RS03745	PF14520	Helix-hairpin-helix domain
RG54_RS03755	PF05708	Orthopoxvirus protein of unknown function (DUF830)
RG54_RS03760	PF02075	Crossover junction endodeoxyribonuclease RuvC
RG54_RS03765	PF01709	Transcriptional regulator
RG54_RS03770	PF00293	NUDIX domain
RG54_RS03775	PF00152	tRNA synthetases class II (D, K and N)
RG54_RS03775	PF01336	OB-fold nucleic acid binding domain
RG54_RS03775	PF02938	GAD domain
RG54_RS03780	PF00857	Isochorismatase family
RG54_RS03785	PF01904	Protein of unknown function DUF72
RG54_RS03790	PF01124	MAPEG family
RG54_RS03795	PF13649	Methyltransferase domain
RG54_RS03800	PF08003	Protein of unknown function (DUF1698)
RG54_RS03805	PF00384	Molybdopterin oxidoreductase
RG54_RS03805	PF01568	Molydopterin dinucleotide binding domain
RG54_RS03810	PF03264	NapC/NirT cytochrome c family, N-terminal region
RG54_RS03815	PF03932	CutC family
RG54_RS03820	PF06185	YecM protein
RG54_RS03830	PF00750	tRNA synthetases class I (R)
RG54_RS03830	PF03485	Arginyl tRNA synthetase N terminal domain
RG54_RS03830	PF05746	DALR anticodon binding domain
RG54_RS03835	PF07007	Protein of unknown function (DUF1311)
RG54_RS03840	PF06366	RG54_RS03840
RG54_RS03845	PF00771	FHIPEP family
RG54_RS03850	PF01312	FlhB HrpN YscU SpaS Family
RG54_RS03855	PF04344	Chemotaxis phosphatase, CheZ
RG54_RS03860	PF00072	Response regulator receiver domain
RG54_RS03865	PF00072	Response regulator receiver domain
RG54_RS03865	PF01339	CheB methylesterase
RG54_RS03870	PF01739	CheR methyltransferase, SAM binding domain
RG54_RS03870	PF03705	CheR methyltransferase, all-alpha domain
RG54_RS03875	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RG54_RS03875	PF00672	HAMP domain
RG54_RS03875	PF02203	Tar ligand binding domain homologue
RG54_RS03880	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RG54_RS03880	PF00672	HAMP domain
RG54_RS03880	PF02203	Tar ligand binding domain homologue
RG54_RS03885	PF01584	CheW-like domain
RG54_RS03890	PF01584	CheW-like domain
RG54_RS03890	PF01627	Hpt domain
RG54_RS03890	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS03890	PF02895	Signal transducing histidine kinase, homodimeric domain
RG54_RS03890	PF09078	CheY binding
RG54_RS03895	PF00691	OmpA family
RG54_RS03895	PF13677	RG54_RS03895
RG54_RS03900	PF01618	RG54_RS03900
RG54_RS03905	PF05280	Flagellar transcriptional activator (FlhC)
RG54_RS03910	PF05247	Flagellar transcriptional activator (FlhD)
RG54_RS03915	PF00582	Universal stress protein family
RG54_RS03920	PF00982	Glycosyltransferase family 20
RG54_RS03925	PF02358	Trehalose-phosphatase
RG54_RS03930	PF02653	RG54_RS03930
RG54_RS03935	PF00005	ABC transporter
RG54_RS03940	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
RG54_RS03950	PF00210	Ferritin-like domain
RG54_RS03955	PF10964	RG54_RS03955
RG54_RS03965	PF13992	RG54_RS03965
RG54_RS03970	PF00210	Ferritin-like domain
RG54_RS03975	PF10678	RG54_RS03975
RG54_RS03980	PF03222	Tryptophan/tyrosine permease family
RG54_RS03985	PF02810	SEC-C motif
RG54_RS03985	PF03695	Uncharacterised protein family (UPF0149)
RG54_RS04005	PF01066	CDP-alcohol phosphatidyltransferase
RG54_RS04010	PF01541	GIY-YIG catalytic domain
RG54_RS04010	PF02151	UvrB/uvrC motif
RG54_RS04010	PF08459	UvrC Helix-hairpin-helix N-terminal
RG54_RS04010	PF14520	Helix-hairpin-helix domain
RG54_RS04015	PF00072	Response regulator receiver domain
RG54_RS04015	PF00196	Bacterial regulatory proteins, luxR family
RG54_RS04025	PF10769	RG54_RS04025
RG54_RS04030	PF00196	Bacterial regulatory proteins, luxR family
RG54_RS04030	PF03472	Autoinducer binding domain
RG54_RS04035	PF00005	ABC transporter
RG54_RS04040	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS04045	PF00291	Pyridoxal-phosphate dependent enzyme
RG54_RS04050	PF00497	Bacterial extracellular solute-binding proteins, family 3
RG54_RS04055	PF02899	Phage integrase, N-terminal SAM-like domain
RG54_RS04060	PF04539	Sigma-70 region 3
RG54_RS04060	PF04542	Sigma-70 region 2
RG54_RS04060	PF04545	Sigma-70, region 4
RG54_RS04065	PF00669	Bacterial flagellin N-terminal helical region
RG54_RS04065	PF00700	Bacterial flagellin C-terminal helical region
RG54_RS04065	PF12445	RG54_RS04065
RG54_RS04075	PF02465	RG54_RS04075
RG54_RS04075	PF07195	RG54_RS04075
RG54_RS04080	PF02561	Flagellar protein FliS
RG54_RS04085	PF05400	Flagellar protein FliT
RG54_RS04090	PF00128	Alpha amylase, catalytic domain
RG54_RS04090	PF02806	Alpha amylase, C-terminal all-beta domain
RG54_RS04095	PF13987	YedD-like protein
RG54_RS04105	PF04143	RG54_RS04105
RG54_RS04110	PF01206	Sulfurtransferase TusA
RG54_RS04115	PF02586	Uncharacterised ACR, COG2135
RG54_RS04125	PF02049	RG54_RS04125
RG54_RS04135	PF01514	Secretory protein of YscJ/FliF family
RG54_RS04135	PF08345	RG54_RS04135
RG54_RS04140	PF01706	FliG C-terminal domain
RG54_RS04140	PF14841	FliG middle domain
RG54_RS04140	PF14842	FliG N-terminal domain
RG54_RS04145	PF02108	RG54_RS04145
RG54_RS04150	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
RG54_RS04155	PF02050	Flagellar FliJ protein
RG54_RS04160	PF02120	Flagellar hook-length control protein FliK
RG54_RS04165	PF03748	RG54_RS04165
RG54_RS04170	PF01052	Surface presentation of antigens (SPOA)
RG54_RS04170	PF02154	Flagellar motor switch protein FliM
RG54_RS04175	PF01052	Surface presentation of antigens (SPOA)
RG54_RS04175	PF16973	RG54_RS04175
RG54_RS04180	PF04347	RG54_RS04180
RG54_RS04185	PF00813	RG54_RS04185
RG54_RS04190	PF01313	RG54_RS04190
RG54_RS04195	PF01311	RG54_RS04195
RG54_RS04200	PF00196	Bacterial regulatory proteins, luxR family
RG54_RS04205	PF10781	RG54_RS04205
RG54_RS04215	PF10733	RG54_RS04215
RG54_RS04220	PF08282	haloacid dehalogenase-like hydrolase
RG54_RS04225	PF00990	GGDEF domain
RG54_RS04225	PF17151	RG54_RS04225
RG54_RS04235	PF09926	RG54_RS04235
RG54_RS04240	PF05661	RG54_RS04240
RG54_RS04245	PF00892	EamA-like transporter family
RG54_RS04250	PF03852	DNA mismatch endonuclease Vsr
RG54_RS04255	PF00145	C-5 cytosine-specific DNA methylase
RG54_RS04260	PF01966	HD domain
RG54_RS04275	PF00267	Gram-negative porin
RG54_RS04290	PF00512	His Kinase A (phospho-acceptor) domain
RG54_RS04290	PF00672	HAMP domain
RG54_RS04290	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS04295	PF00072	Response regulator receiver domain
RG54_RS04295	PF00486	Transcriptional regulatory protein, C terminal
RG54_RS04300	PF00576	HIUase/Transthyretin family
RG54_RS04305	PF00174	Oxidoreductase molybdopterin binding domain
RG54_RS04310	PF01794	RG54_RS04310
RG54_RS04315	PF09223	YodA lipocalin-like domain
RG54_RS04320	PF01292	Prokaryotic cytochrome b561
RG54_RS04335	PF02413	RG54_RS04335
RG54_RS04335	PF14301	RG54_RS04335
RG54_RS04345	PF01391	Collagen triple helix repeat (20 copies)
RG54_RS04345	PF08400	RG54_RS04345
RG54_RS04350	PF01848	RG54_RS04350
RG54_RS04360	PF06805	RG54_RS04360
RG54_RS04365	PF00877	NlpC/P60 family
RG54_RS04365	PF14464	Prokaryotic homologs of the JAB domain
RG54_RS04370	PF05100	RG54_RS04370
RG54_RS04375	PF05939	RG54_RS04375
RG54_RS04380	PF06791	RG54_RS04380
RG54_RS04380	PF09718	RG54_RS04380
RG54_RS04385	PF06223	RG54_RS04385
RG54_RS04390	PF06894	RG54_RS04390
RG54_RS04395	PF02368	Bacterial Ig-like domain (group 2)
RG54_RS04395	PF16461	RG54_RS04395
RG54_RS04400	PF06141	Phage minor tail protein U
RG54_RS04405	PF06763	RG54_RS04405
RG54_RS04410	PF13856	ATP-binding sugar transporter from pro-phage
RG54_RS04415	PF09956	RG54_RS04415
RG54_RS04420	PF00574	Clp protease
RG54_RS04425	PF05136	RG54_RS04425
RG54_RS04435	PF05876	RG54_RS04435
RG54_RS04440	PF07278	RG54_RS04440
RG54_RS04445	PF07166	Protein of unknown function (DUF1398)
RG54_RS04450	PF03245	RG54_RS04450
RG54_RS04455	PF00959	Phage lysozyme
RG54_RS04460	PF04971	RG54_RS04460
RG54_RS04465	PF05696	RG54_RS04465
RG54_RS04470	PF07125	RG54_RS04470
RG54_RS04475	PF08410	RG54_RS04475
RG54_RS04480	PF06519	TolA C-terminal
RG54_RS04515	PF06530	RG54_RS04515
RG54_RS04520	PF05866	Endodeoxyribonuclease RusA
RG54_RS04525	PF06147	RG54_RS04525
RG54_RS04535	PF01848	RG54_RS04535
RG54_RS04540	PF04448	RG54_RS04540
RG54_RS04560	PF14359	Domain of unknown function (DUF4406)
RG54_RS04565	PF06163	RG54_RS04565
RG54_RS04570	PF07789	RG54_RS04570
RG54_RS04575	PF01695	IstB-like ATP binding protein
RG54_RS04585	PF06254	Protein of unknown function (DUF1019)
RG54_RS04590	PF15943	RG54_RS04590
RG54_RS04605	PF05016	Plasmid stabilisation system protein
RG54_RS04615	PF07151	RG54_RS04615
RG54_RS04635	PF05358	RG54_RS04635
RG54_RS04640	PF07358	RG54_RS04640
RG54_RS04645	PF06630	RG54_RS04645
RG54_RS04645	PF16473	RG54_RS04645
RG54_RS04650	PF13986	RG54_RS04650
RG54_RS04655	PF00589	Phage integrase family
RG54_RS04655	PF13495	Phage integrase, N-terminal SAM-like domain
RG54_RS04665	PF06167	Glucose-regulated metallo-peptidase M90
RG54_RS04675	PF02369	Bacterial Ig-like domain (group 1)
RG54_RS04675	PF09134	Invasin, domain 3
RG54_RS04675	PF11924	Protein of unknown function (DUF3442)
RG54_RS04680	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
RG54_RS04685	PF00083	Sugar (and other) transporter
RG54_RS04685	PF07690	Major Facilitator Superfamily
RG54_RS04690	PF01048	Phosphorylase superfamily
RG54_RS04690	PF10423	Bacterial AMP nucleoside phosphorylase N-terminus
RG54_RS04695	PF01709	Transcriptional regulator
RG54_RS04710	PF01554	MatE
RG54_RS04720	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS04720	PF03466	LysR substrate binding domain
RG54_RS04725	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS04725	PF03466	LysR substrate binding domain
RG54_RS04735	PF03734	L,D-transpeptidase catalytic domain
RG54_RS04740	PF02277	Phosphoribosyltransferase
RG54_RS04745	PF02654	RG54_RS04745
RG54_RS04750	PF02283	Cobinamide kinase / cobinamide phosphate guanyltransferase
RG54_RS04770	PF01527	Transposase
RG54_RS04775	PF02126	Phosphotriesterase family
RG54_RS04790	PF01610	RG54_RS04790
RG54_RS04795	PF14690	RG54_RS04795
RG54_RS04800	PF11682	RG54_RS04800
RG54_RS04805	PF11682	RG54_RS04805
RG54_RS04810	PF11726	RG54_RS04810
RG54_RS04830	PF05930	Prophage CP4-57 regulatory protein (AlpA)
RG54_RS04850	PF00665	Integrase core domain
RG54_RS04850	PF02796	Helix-turn-helix domain of resolvase
RG54_RS04885	PF05717	RG54_RS04885
RG54_RS04890	PF03050	RG54_RS04890
RG54_RS04890	PF13005	RG54_RS04890
RG54_RS04890	PF13007	RG54_RS04890
RG54_RS04890	PF13817	RG54_RS04890
RG54_RS04910	PF00350	Dynamin family
RG54_RS04915	PF13990	RG54_RS04915
RG54_RS04920	PF01734	Patatin-like phospholipase
RG54_RS04940	PF06067	RG54_RS04940
RG54_RS04945	PF03230	Antirestriction protein
RG54_RS04950	PF04002	RadC-like JAB domain
RG54_RS04955	PF06174	RG54_RS04955
RG54_RS04960	PF06154	YagB/YeeU/YfjZ family
RG54_RS04965	PF06755	RG54_RS04965
RG54_RS04980	PF06117	RG54_RS04980
RG54_RS04985	PF10662	Ethanolamine utilisation - propanediol utilisation
RG54_RS04990	PF04363	RG54_RS04990
RG54_RS04995	PF04632	RG54_RS04995
RG54_RS05000	PF06445	GyrI-like small molecule binding domain
RG54_RS05005	PF00768	D-alanyl-D-alanine carboxypeptidase
RG54_RS05005	PF07943	Penicillin-binding protein 5, C-terminal domain
RG54_RS05010	PF00929	Exonuclease
RG54_RS05010	PF08411	Exonuclease C-terminal
RG54_RS05015	PF01206	Sulfurtransferase TusA
RG54_RS05020	PF04143	RG54_RS05020
RG54_RS05025	PF13520	Amino acid permease
RG54_RS05030	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS05030	PF03466	LysR substrate binding domain
RG54_RS05035	PF01370	NAD dependent epimerase/dehydratase family
RG54_RS05040	PF06769	Plasmid encoded toxin Txe
RG54_RS05045	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
RG54_RS05050	PF08047	RG54_RS05050
RG54_RS05060	PF01634	ATP phosphoribosyltransferase
RG54_RS05060	PF08029	HisG, C-terminal domain
RG54_RS05065	PF00815	Histidinol dehydrogenase
RG54_RS05070	PF00155	Aminotransferase class I and II
RG54_RS05075	PF00475	Imidazoleglycerol-phosphate dehydratase
RG54_RS05075	PF08645	Polynucleotide kinase 3 phosphatase
RG54_RS05080	PF00117	Glutamine amidotransferase class-I
RG54_RS05085	PF00977	Histidine biosynthesis protein
RG54_RS05090	PF00977	Histidine biosynthesis protein
RG54_RS05095	PF01502	Phosphoribosyl-AMP cyclohydrolase
RG54_RS05095	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
RG54_RS05100	PF02706	Chain length determinant protein
RG54_RS05105	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
RG54_RS05105	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
RG54_RS05105	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
RG54_RS05110	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
RG54_RS05110	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
RG54_RS05120	PF00535	Glycosyl transferase family 2
RG54_RS05130	PF00132	Bacterial transferase hexapeptide (six repeats)
RG54_RS05135	PF00534	Glycosyl transferases group 1
RG54_RS05135	PF13439	Glycosyltransferase Family 4
RG54_RS05140	PF13641	Glycosyltransferase like family 2
RG54_RS05145	PF03275	UDP-galactopyranose mutase
RG54_RS05145	PF13450	NAD(P)-binding Rossmann-like domain
RG54_RS05150	PF01943	RG54_RS05150
RG54_RS05155	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
RG54_RS05160	PF00483	Nucleotidyl transferase
RG54_RS05165	PF04321	RmlD substrate binding domain
RG54_RS05170	PF16363	RG54_RS05170
RG54_RS05180	PF00483	Nucleotidyl transferase
RG54_RS05190	PF00534	Glycosyl transferases group 1
RG54_RS05190	PF13439	Glycosyltransferase Family 4
RG54_RS05195	PF04230	RG54_RS05195
RG54_RS05205	PF13440	RG54_RS05205
RG54_RS05210	PF02397	RG54_RS05210
RG54_RS05210	PF13727	CoA-binding domain
RG54_RS05215	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
RG54_RS05215	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
RG54_RS05215	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
RG54_RS05215	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
RG54_RS05225	PF00534	Glycosyl transferases group 1
RG54_RS05225	PF13579	Glycosyl transferase 4-like domain
RG54_RS05230	PF00293	NUDIX domain
RG54_RS05235	PF01370	NAD dependent epimerase/dehydratase family
RG54_RS05240	PF16363	RG54_RS05240
RG54_RS05245	PF00132	Bacterial transferase hexapeptide (six repeats)
RG54_RS05250	PF00535	Glycosyl transferase family 2
RG54_RS05260	PF00534	Glycosyl transferases group 1
RG54_RS05260	PF13439	Glycosyltransferase Family 4
RG54_RS05265	PF00132	Bacterial transferase hexapeptide (six repeats)
RG54_RS05270	PF00535	Glycosyl transferase family 2
RG54_RS05275	PF02706	Chain length determinant protein
RG54_RS05275	PF13614	AAA domain
RG54_RS05275	PF13807	RG54_RS05275
RG54_RS05280	PF01451	Low molecular weight phosphotyrosine protein phosphatase
RG54_RS05285	PF02563	Polysaccharide biosynthesis/export protein
RG54_RS05285	PF10531	SLBB domain
RG54_RS05290	PF00571	CBS domain
RG54_RS05290	PF03471	Transporter associated domain
RG54_RS05290	PF03741	RG54_RS05290
RG54_RS05295	PF05170	RG54_RS05295
RG54_RS05300	PF00692	dUTPase
RG54_RS05305	PF00485	Phosphoribulokinase / Uridine kinase family
RG54_RS05310	PF00563	EAL domain
RG54_RS05310	PF00990	GGDEF domain
RG54_RS05310	PF05231	RG54_RS05310
RG54_RS05310	PF08447	PAS fold
RG54_RS05310	PF08448	PAS fold
RG54_RS05310	PF13426	PAS domain
RG54_RS05315	PF00730	HhH-GPD superfamily base excision DNA repair protein
RG54_RS05315	PF06029	AlkA N-terminal domain
RG54_RS05320	PF00012	Hsp70 protein
RG54_RS05330	PF13672	Protein phosphatase 2C
RG54_RS05335	PF00092	von Willebrand factor type A domain
RG54_RS05340	PF13956	RG54_RS05340
RG54_RS05360	PF14020	RG54_RS05360
RG54_RS05370	PF02413	RG54_RS05370
RG54_RS05375	PF03335	Phage tail fibre repeat
RG54_RS05375	PF07484	Phage Tail Collar Domain
RG54_RS05375	PF08400	RG54_RS05375
RG54_RS05380	PF06316	Enterobacterial Ail/Lom protein
RG54_RS05380	PF07471	Phage DNA packaging protein Nu1
RG54_RS05395	PF03245	RG54_RS05395
RG54_RS05405	PF05565	RG54_RS05405
RG54_RS05420	PF10930	RG54_RS05420
RG54_RS05425	PF07007	Protein of unknown function (DUF1311)
RG54_RS05435	PF07825	Excisionase-like protein
RG54_RS05440	PF00589	Phage integrase family
RG54_RS05440	PF02899	Phage integrase, N-terminal SAM-like domain
RG54_RS05440	PF09003	Bacteriophage lambda integrase, N-terminal domain
RG54_RS05445	PF13437	HlyD family secretion protein
RG54_RS05445	PF13533	Biotin-lipoyl like
RG54_RS05450	PF00873	AcrB/AcrD/AcrF family
RG54_RS05455	PF00873	AcrB/AcrD/AcrF family
RG54_RS05460	PF07690	Major Facilitator Superfamily
RG54_RS05465	PF00512	His Kinase A (phospho-acceptor) domain
RG54_RS05465	PF00672	HAMP domain
RG54_RS05465	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS05470	PF00072	Response regulator receiver domain
RG54_RS05470	PF00486	Transcriptional regulatory protein, C terminal
RG54_RS05480	PF07411	Domain of unknown function (DUF1508)
RG54_RS05485	PF03693	Uncharacterised protein family (UPF0156)
RG54_RS05490	PF05016	Plasmid stabilisation system protein
RG54_RS05495	PF01136	RG54_RS05495
RG54_RS05495	PF16325	RG54_RS05495
RG54_RS05510	PF00781	Diacylglycerol kinase catalytic domain
RG54_RS05515	PF00455	RG54_RS05515
RG54_RS05515	PF08220	DeoR-like helix-turn-helix domain
RG54_RS05520	PF00107	Zinc-binding dehydrogenase
RG54_RS05520	PF08240	Alcohol dehydrogenase GroES-like domain
RG54_RS05525	PF03611	RG54_RS05525
RG54_RS05530	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
RG54_RS05535	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
RG54_RS05540	PF08013	Tagatose 6 phosphate kinase
RG54_RS05545	PF01116	Fructose-bisphosphate aldolase class-II
RG54_RS05555	PF01791	DeoC/LacD family aldolase
RG54_RS05560	PF03825	RG54_RS05560
RG54_RS05565	PF03747	ADP-ribosylglycohydrolase
RG54_RS05570	PF00294	pfkB family carbohydrate kinase
RG54_RS05575	PF00392	Bacterial regulatory proteins, gntR family
RG54_RS05575	PF07702	UTRA domain
RG54_RS05580	PF01183	Glycosyl hydrolases family 25
RG54_RS05585	PF08543	Phosphomethylpyrimidine kinase
RG54_RS05590	PF02110	Hydroxyethylthiazole kinase family
RG54_RS05595	PF02583	Metal-sensitive transcriptional repressor
RG54_RS05600	PF03824	RG54_RS05600
RG54_RS05605	PF11776	Domain of unknown function (DUF3315)
RG54_RS05610	PF00419	Fimbrial protein
RG54_RS05615	PF00577	Outer membrane usher protein
RG54_RS05615	PF13953	PapC C-terminal domain
RG54_RS05615	PF13954	PapC N-terminal domain
RG54_RS05620	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
RG54_RS05620	PF02753	Pili assembly chaperone PapD, C-terminal domain
RG54_RS05625	PF00419	Fimbrial protein
RG54_RS05635	PF10836	RG54_RS05635
RG54_RS05640	PF10609	ParA/MinD ATPase like
RG54_RS05645	PF01588	Putative tRNA binding domain
RG54_RS05645	PF09334	tRNA synthetases class I (M)
RG54_RS05650	PF05406	WGR domain
RG54_RS05650	PF13569	RG54_RS05650
RG54_RS05655	PF13569	RG54_RS05655
RG54_RS05675	PF07728	AAA domain (dynein-related subfamily)
RG54_RS05685	PF05762	VWA domain containing CoxE-like protein
RG54_RS05690	PF04434	RG54_RS05690
RG54_RS05695	PF06998	Protein of unknown function (DUF1307)
RG54_RS05700	PF07308	RG54_RS05700
RG54_RS05705	PF00072	Response regulator receiver domain
RG54_RS05705	PF04397	LytTr DNA-binding domain
RG54_RS05710	PF06580	RG54_RS05710
RG54_RS05710	PF07694	5TMR of 5TMR-LYT
RG54_RS05710	PF13492	GAF domain
RG54_RS05715	PF13411	MerR HTH family regulatory protein
RG54_RS05725	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS05730	PF00005	ABC transporter
RG54_RS05735	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS05740	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
RG54_RS05745	PF00933	Glycosyl hydrolase family 3 N terminal domain
RG54_RS05745	PF01915	Glycosyl hydrolase family 3 C-terminal domain
RG54_RS05745	PF14310	Fibronectin type III-like domain
RG54_RS05750	PF01565	FAD binding domain
RG54_RS05750	PF09330	D-lactate dehydrogenase, membrane binding
RG54_RS05755	PF00768	D-alanyl-D-alanine carboxypeptidase
RG54_RS05760	PF06930	RG54_RS05760
RG54_RS05765	PF09335	RG54_RS05765
RG54_RS05770	PF13561	Enoyl-(Acyl carrier protein) reductase
RG54_RS05775	PF02321	Outer membrane efflux protein
RG54_RS05795	PF01207	Dihydrouridine synthase (Dus)
RG54_RS05800	PF03788	RG54_RS05800
RG54_RS05805	PF04172	RG54_RS05805
RG54_RS05810	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
RG54_RS05810	PF08211	Cytidine and deoxycytidylate deaminase zinc-binding region
RG54_RS05815	PF02698	DUF218 domain
RG54_RS05820	PF10808	RG54_RS05820
RG54_RS05825	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RG54_RS05825	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
RG54_RS05830	PF01180	Dihydroorotate dehydrogenase
RG54_RS05830	PF14697	4Fe-4S dicluster domain
RG54_RS05835	PF02653	RG54_RS05835
RG54_RS05840	PF00005	ABC transporter
RG54_RS05845	PF13407	Periplasmic binding protein domain
RG54_RS05850	PF00356	Bacterial regulatory proteins, lacI family
RG54_RS05850	PF13377	Periplasmic binding protein-like domain
RG54_RS05860	PF04235	RG54_RS05860
RG54_RS05865	PF01227	GTP cyclohydrolase I
RG54_RS05875	PF00756	Putative esterase
RG54_RS05880	PF00593	TonB dependent receptor
RG54_RS05880	PF07715	TonB-dependent Receptor Plug Domain
RG54_RS05890	PF00324	Amino acid permease
RG54_RS05900	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS05900	PF03466	LysR substrate binding domain
RG54_RS05905	PF03601	RG54_RS05905
RG54_RS05910	PF01261	Xylose isomerase-like TIM barrel
RG54_RS05915	PF00294	pfkB family carbohydrate kinase
RG54_RS05915	PF13412	Winged helix-turn-helix DNA-binding
RG54_RS05920	PF01773	Na+ dependent nucleoside transporter N-terminus
RG54_RS05920	PF07662	Na+ dependent nucleoside transporter C-terminus
RG54_RS05925	PF01156	Inosine-uridine preferring nucleoside hydrolase
RG54_RS05930	PF00027	Cyclic nucleotide-binding domain
RG54_RS05935	PF01773	Na+ dependent nucleoside transporter N-terminus
RG54_RS05935	PF07662	Na+ dependent nucleoside transporter C-terminus
RG54_RS05940	PF04227	Indigoidine synthase A like protein
RG54_RS05945	PF00294	pfkB family carbohydrate kinase
RG54_RS05950	PF12035	RG54_RS05950
RG54_RS05955	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
RG54_RS05955	PF02378	Phosphotransferase system, EIIC
RG54_RS05960	PF00294	pfkB family carbohydrate kinase
RG54_RS05965	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
RG54_RS05965	PF00381	PTS HPr component phosphorylation site
RG54_RS05970	PF07690	Major Facilitator Superfamily
RG54_RS05975	PF03692	RG54_RS05975
RG54_RS05980	PF01132	Elongation factor P (EF-P) OB domain
RG54_RS05980	PF08207	Elongation factor P (EF-P) KOW-like domain
RG54_RS05980	PF09285	Elongation factor P, C-terminal
RG54_RS05985	PF01232	Mannitol dehydrogenase Rossmann domain
RG54_RS05985	PF08125	Mannitol dehydrogenase C-terminal domain
RG54_RS05990	PF02492	CobW/HypB/UreG, nucleotide-binding domain
RG54_RS05990	PF07683	Cobalamin synthesis protein cobW C-terminal domain
RG54_RS05995	PF01569	PAP2 superfamily
RG54_RS06000	PF00877	NlpC/P60 family
RG54_RS06005	PF00563	EAL domain
RG54_RS06005	PF12792	RG54_RS06005
RG54_RS06010	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RG54_RS06015	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS06020	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS06020	PF12911	RG54_RS06020
RG54_RS06025	PF00005	ABC transporter
RG54_RS06025	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RG54_RS06030	PF13989	RG54_RS06030
RG54_RS06040	PF07690	Major Facilitator Superfamily
RG54_RS06045	PF00849	RNA pseudouridylate synthase
RG54_RS06045	PF01479	S4 domain
RG54_RS06055	PF00271	Helicase conserved C-terminal domain
RG54_RS06055	PF04851	Type III restriction enzyme, res subunit
RG54_RS06060	PF01386	Ribosomal L25p family
RG54_RS06065	PF04245	RG54_RS06065
RG54_RS06070	PF07208	Protein of unknown function (DUF1414)
RG54_RS06075	PF00884	Sulfatase
RG54_RS06075	PF11893	RG54_RS06075
RG54_RS06095	PF00072	Response regulator receiver domain
RG54_RS06095	PF00196	Bacterial regulatory proteins, luxR family
RG54_RS06100	PF03918	Cytochrome C biogenesis protein
RG54_RS06100	PF14559	Tetratricopeptide repeat
RG54_RS06105	PF08534	Redoxin
RG54_RS06110	PF01578	RG54_RS06110
RG54_RS06110	PF16327	RG54_RS06110
RG54_RS06115	PF03100	CcmE
RG54_RS06120	PF04995	RG54_RS06120
RG54_RS06125	PF01578	RG54_RS06125
RG54_RS06130	PF03379	RG54_RS06130
RG54_RS06135	PF00005	ABC transporter
RG54_RS06140	PF03264	NapC/NirT cytochrome c family, N-terminal region
RG54_RS06145	PF03892	Nitrate reductase cytochrome c-type subunit (NapB)
RG54_RS06150	PF12801	RG54_RS06150
RG54_RS06150	PF13237	4Fe-4S dicluster domain
RG54_RS06155	PF12800	4Fe-4S binding domain
RG54_RS06155	PF12838	4Fe-4S dicluster domain
RG54_RS06160	PF00384	Molybdopterin oxidoreductase
RG54_RS06160	PF01568	Molydopterin dinucleotide binding domain
RG54_RS06160	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
RG54_RS06165	PF03927	NapD protein
RG54_RS06170	PF00037	4Fe-4S binding domain
RG54_RS06170	PF12800	4Fe-4S binding domain
RG54_RS06170	PF13187	4Fe-4S dicluster domain
RG54_RS06180	PF03974	Ecotin
RG54_RS06190	PF06039	RG54_RS06190
RG54_RS06195	PF00005	ABC transporter
RG54_RS06195	PF00664	ABC transporter transmembrane region
RG54_RS06200	PF13532	2OG-Fe(II) oxygenase superfamily
RG54_RS06205	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
RG54_RS06205	PF02805	Metal binding domain of Ada
RG54_RS06205	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
RG54_RS06205	PF12833	Helix-turn-helix domain
RG54_RS06210	PF02424	ApbE family
RG54_RS06215	PF00267	Gram-negative porin
RG54_RS06230	PF01627	Hpt domain
RG54_RS06230	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS06230	PF16359	RG54_RS06230
RG54_RS06235	PF00072	Response regulator receiver domain
RG54_RS06235	PF00196	Bacterial regulatory proteins, luxR family
RG54_RS06245	PF00072	Response regulator receiver domain
RG54_RS06245	PF00512	His Kinase A (phospho-acceptor) domain
RG54_RS06245	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS06245	PF09456	RcsC Alpha-Beta-Loop (ABL)
RG54_RS06250	PF00512	His Kinase A (phospho-acceptor) domain
RG54_RS06250	PF00672	HAMP domain
RG54_RS06250	PF00989	PAS fold
RG54_RS06250	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS06255	PF00072	Response regulator receiver domain
RG54_RS06255	PF00158	Sigma-54 interaction domain
RG54_RS06255	PF02954	Bacterial regulatory protein, Fis family
RG54_RS06260	PF01144	Coenzyme A transferase
RG54_RS06265	PF01144	Coenzyme A transferase
RG54_RS06270	PF02667	RG54_RS06270
RG54_RS06275	PF00108	Thiolase, N-terminal domain
RG54_RS06275	PF02803	Thiolase, C-terminal domain
RG54_RS06280	PF09906	RG54_RS06280
RG54_RS06285	PF10062	RG54_RS06285
RG54_RS06290	PF00207	Alpha-2-macroglobulin family
RG54_RS06290	PF01835	MG2 domain
RG54_RS06290	PF07703	Alpha-2-macroglobulin family N-terminal region
RG54_RS06295	PF06672	RG54_RS06295
RG54_RS06300	PF09909	RG54_RS06300
RG54_RS06305	PF00521	DNA gyrase/topoisomerase IV, subunit A
RG54_RS06305	PF03989	DNA gyrase C-terminal domain, beta-propeller
RG54_RS06310	PF13489	Methyltransferase domain
RG54_RS06315	PF02415	RG54_RS06315
RG54_RS06315	PF03212	Pertactin
RG54_RS06315	PF03797	Autotransporter beta-domain
RG54_RS06315	PF12951	RG54_RS06315
RG54_RS06325	PF00317	Ribonucleotide reductase, all-alpha domain
RG54_RS06325	PF02867	Ribonucleotide reductase, barrel domain
RG54_RS06325	PF03477	ATP cone domain
RG54_RS06330	PF00268	Ribonucleotide reductase, small chain
RG54_RS06335	PF00111	2Fe-2S iron-sulfur cluster binding domain
RG54_RS06340	PF06293	Lipopolysaccharide kinase (Kdo/WaaP) family
RG54_RS06355	PF03009	Glycerophosphoryl diester phosphodiesterase family
RG54_RS06360	PF07690	Major Facilitator Superfamily
RG54_RS06370	PF01266	FAD dependent oxidoreductase
RG54_RS06370	PF04324	BFD-like [2Fe-2S] binding domain
RG54_RS06375	PF00890	FAD binding domain
RG54_RS06380	PF02754	RG54_RS06380
RG54_RS06380	PF13183	4Fe-4S dicluster domain
RG54_RS06385	PF04754	RG54_RS06385
RG54_RS06390	PF03328	HpcH/HpaI aldolase/citrate lyase family
RG54_RS06395	PF00994	Probable molybdopterin binding domain
RG54_RS06400	PF07437	RG54_RS06400
RG54_RS06405	PF00293	NUDIX domain
RG54_RS06410	PF00300	Histidine phosphatase superfamily (branch 1)
RG54_RS06415	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
RG54_RS06420	PF00535	Glycosyl transferase family 2
RG54_RS06425	PF00551	Formyl transferase
RG54_RS06425	PF01370	NAD dependent epimerase/dehydratase family
RG54_RS06425	PF02911	Formyl transferase, C-terminal domain
RG54_RS06430	PF01522	Polysaccharide deacetylase
RG54_RS06435	PF02366	RG54_RS06435
RG54_RS06440	PF00892	EamA-like transporter family
RG54_RS06450	PF11183	Polymyxin resistance protein PmrD
RG54_RS06455	PF00501	AMP-binding enzyme
RG54_RS06455	PF13193	AMP-binding enzyme C-terminal domain
RG54_RS06460	PF13378	Enolase C-terminal domain-like
RG54_RS06465	PF00378	Enoyl-CoA hydratase/isomerase family
RG54_RS06470	PF12697	Alpha/beta hydrolase family
RG54_RS06475	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
RG54_RS06475	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
RG54_RS06475	PF16582	RG54_RS06475
RG54_RS06480	PF00425	chorismate binding enzyme
RG54_RS06485	PF05957	RG54_RS06485
RG54_RS06490	PF13673	Acetyltransferase (GNAT) domain
RG54_RS06495	PF12706	Beta-lactamase superfamily domain
RG54_RS06510	PF00092	von Willebrand factor type A domain
RG54_RS06510	PF12034	RG54_RS06510
RG54_RS06510	PF12450	RG54_RS06510
RG54_RS06515	PF04389	Peptidase family M28
RG54_RS06520	PF08974	Domain of unknown function (DUF1877)
RG54_RS06525	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
RG54_RS06530	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
RG54_RS06535	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
RG54_RS06535	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
RG54_RS06540	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
RG54_RS06545	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
RG54_RS06550	PF12838	4Fe-4S dicluster domain
RG54_RS06555	PF00146	NADH dehydrogenase
RG54_RS06560	PF00384	Molybdopterin oxidoreductase
RG54_RS06560	PF01568	Molydopterin dinucleotide binding domain
RG54_RS06560	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
RG54_RS06560	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
RG54_RS06560	PF13510	2Fe-2S iron-sulfur cluster binding domain
RG54_RS06565	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
RG54_RS06565	PF10531	SLBB domain
RG54_RS06565	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
RG54_RS06570	PF01257	Thioredoxin-like [2Fe-2S] ferredoxin
RG54_RS06575	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
RG54_RS06575	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
RG54_RS06580	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
RG54_RS06585	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
RG54_RS06590	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS06590	PF03466	LysR substrate binding domain
RG54_RS06600	PF00155	Aminotransferase class I and II
RG54_RS06605	PF13023	HD domain
RG54_RS06610	PF02080	TrkA-C domain
RG54_RS06610	PF03600	Citrate transporter
RG54_RS06615	PF13419	Haloacid dehalogenase-like hydrolase
RG54_RS06620	PF03887	YfbU domain
RG54_RS06625	PF04217	RG54_RS06625
RG54_RS06635	PF00871	Acetokinase family
RG54_RS06640	PF01515	Phosphate acetyl/butaryl transferase
RG54_RS06640	PF07085	DRTGG domain
RG54_RS06640	PF13500	AAA domain
RG54_RS06645	PF03606	RG54_RS06645
RG54_RS06650	PF00293	NUDIX domain
RG54_RS06655	PF12850	Calcineurin-like phosphoesterase superfamily domain
RG54_RS06660	PF13417	Glutathione S-transferase, N-terminal domain
RG54_RS06660	PF14834	Glutathione S-transferase, C-terminal domain
RG54_RS06665	PF00043	Glutathione S-transferase, C-terminal domain
RG54_RS06665	PF02798	Glutathione S-transferase, N-terminal domain
RG54_RS06670	PF02152	Dihydroneopterin aldolase
RG54_RS06675	PF01370	NAD dependent epimerase/dehydratase family
RG54_RS06675	PF08338	Domain of unknown function (DUF1731)
RG54_RS06680	PF04754	RG54_RS06680
RG54_RS06685	PF00005	ABC transporter
RG54_RS06690	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS06695	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS06700	PF00497	Bacterial extracellular solute-binding proteins, family 3
RG54_RS06705	PF00497	Bacterial extracellular solute-binding proteins, family 3
RG54_RS06710	PF02441	Flavoprotein
RG54_RS06715	PF00156	Phosphoribosyl transferase domain
RG54_RS06715	PF13522	Glutamine amidotransferase domain
RG54_RS06720	PF02674	RG54_RS06720
RG54_RS06730	PF05036	Sporulation related domain
RG54_RS06735	PF02875	Mur ligase family, glutamate ligase domain
RG54_RS06735	PF08245	Mur ligase middle domain
RG54_RS06740	PF01039	Carboxyl transferase domain
RG54_RS06745	PF09335	RG54_RS06745
RG54_RS06750	PF01416	tRNA pseudouridine synthase
RG54_RS06755	PF01118	Semialdehyde dehydrogenase, NAD binding domain
RG54_RS06755	PF02774	Semialdehyde dehydrogenase, dimerisation domain
RG54_RS06760	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
RG54_RS06760	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
RG54_RS06760	PF11890	Domain of unknown function (DUF3410)
RG54_RS06770	PF07690	Major Facilitator Superfamily
RG54_RS06780	PF00109	Beta-ketoacyl synthase, N-terminal domain
RG54_RS06780	PF02801	Beta-ketoacyl synthase, C-terminal domain
RG54_RS06785	PF01266	FAD dependent oxidoreductase
RG54_RS06785	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
RG54_RS06790	PF08891	RG54_RS06790
RG54_RS06795	PF04315	RG54_RS06795
RG54_RS06800	PF01925	RG54_RS06800
RG54_RS06805	PF03411	Penicillin-insensitive murein endopeptidase
RG54_RS06810	PF01264	Chorismate synthase
RG54_RS06815	PF05175	Methyltransferase small domain
RG54_RS06820	PF01713	Smr domain
RG54_RS06825	PF11245	RG54_RS06825
RG54_RS06830	PF00419	Fimbrial protein
RG54_RS06835	PF00419	Fimbrial protein
RG54_RS06840	PF00419	Fimbrial protein
RG54_RS06845	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
RG54_RS06845	PF02753	Pili assembly chaperone PapD, C-terminal domain
RG54_RS06850	PF00577	Outer membrane usher protein
RG54_RS06850	PF13953	PapC C-terminal domain
RG54_RS06850	PF13954	PapC N-terminal domain
RG54_RS06855	PF00419	Fimbrial protein
RG54_RS06860	PF00300	Histidine phosphatase superfamily (branch 1)
RG54_RS06865	PF00378	Enoyl-CoA hydratase/isomerase family
RG54_RS06865	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
RG54_RS06865	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
RG54_RS06870	PF00108	Thiolase, N-terminal domain
RG54_RS06870	PF02803	Thiolase, C-terminal domain
RG54_RS06875	PF04175	Protein of unknown function (DUF406)
RG54_RS06885	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
RG54_RS06900	PF04333	RG54_RS06900
RG54_RS06905	PF01226	Formate/nitrite transporter
RG54_RS06915	PF00589	Phage integrase family
RG54_RS06915	PF13356	Domain of unknown function (DUF4102)
RG54_RS06925	PF12833	Helix-turn-helix domain
RG54_RS06930	PF06719	RG54_RS06930
RG54_RS06935	PF00465	Iron-containing alcohol dehydrogenase
RG54_RS06940	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
RG54_RS06950	PF02413	RG54_RS06950
RG54_RS06985	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS06985	PF03466	LysR substrate binding domain
RG54_RS06990	PF02447	RG54_RS06990
RG54_RS06995	PF00291	Pyridoxal-phosphate dependent enzyme
RG54_RS07000	PF07690	Major Facilitator Superfamily
RG54_RS07005	PF00529	HlyD family secretion protein
RG54_RS07005	PF16576	RG54_RS07005
RG54_RS07010	PF00072	Response regulator receiver domain
RG54_RS07010	PF00196	Bacterial regulatory proteins, luxR family
RG54_RS07015	PF00072	Response regulator receiver domain
RG54_RS07015	PF00497	Bacterial extracellular solute-binding proteins, family 3
RG54_RS07015	PF00512	His Kinase A (phospho-acceptor) domain
RG54_RS07015	PF01627	Hpt domain
RG54_RS07015	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS07020	PF02515	CoA-transferase family III
RG54_RS07025	PF03547	RG54_RS07025
RG54_RS07030	PF00205	Thiamine pyrophosphate enzyme, central domain
RG54_RS07030	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
RG54_RS07030	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
RG54_RS07035	PF02515	CoA-transferase family III
RG54_RS07040	PF10938	YfdX protein
RG54_RS07055	PF10810	RG54_RS07055
RG54_RS07060	PF03279	RG54_RS07060
RG54_RS07070	PF00155	Aminotransferase class I and II
RG54_RS07075	PF01590	GAF domain
RG54_RS07075	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS07075	PF06580	RG54_RS07075
RG54_RS07075	PF07694	5TMR of 5TMR-LYT
RG54_RS07080	PF00072	Response regulator receiver domain
RG54_RS07080	PF04397	LytTr DNA-binding domain
RG54_RS07085	PF12833	Helix-turn-helix domain
RG54_RS07090	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
RG54_RS07090	PF00381	PTS HPr component phosphorylation site
RG54_RS07090	PF00391	PEP-utilising enzyme, mobile domain
RG54_RS07090	PF02896	PEP-utilising enzyme, TIM barrel domain
RG54_RS07090	PF05524	PEP-utilising enzyme, N-terminal
RG54_RS07095	PF05343	M42 glutamyl aminopeptidase
RG54_RS07100	PF00557	Metallopeptidase family M24
RG54_RS07100	PF01321	Creatinase/Prolidase N-terminal domain
RG54_RS07105	PF02378	Phosphotransferase system, EIIC
RG54_RS07110	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
RG54_RS07115	PF02685	Glucokinase
RG54_RS07120	PF00654	Voltage gated chloride channel
RG54_RS07125	PF10697	RG54_RS07125
RG54_RS07135	PF01566	RG54_RS07135
RG54_RS07140	PF01773	Na+ dependent nucleoside transporter N-terminus
RG54_RS07140	PF07662	Na+ dependent nucleoside transporter C-terminus
RG54_RS07140	PF07670	Nucleoside recognition
RG54_RS07145	PF00563	EAL domain
RG54_RS07145	PF05231	RG54_RS07145
RG54_RS07160	PF07037	RG54_RS07160
RG54_RS07165	PF07037	RG54_RS07165
RG54_RS07170	PF00749	tRNA synthetases class I (E and Q), catalytic domain
RG54_RS07195	PF14282	RG54_RS07195
RG54_RS07200	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS07200	PF03466	LysR substrate binding domain
RG54_RS07205	PF13593	SBF-like CPA transporter family (DUF4137)
RG54_RS07210	PF12843	RG54_RS07210
RG54_RS07215	PF00533	BRCA1 C Terminus (BRCT) domain
RG54_RS07215	PF01653	NAD-dependent DNA ligase adenylation domain
RG54_RS07215	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
RG54_RS07215	PF03120	NAD-dependent DNA ligase OB-fold domain
RG54_RS07215	PF12826	Helix-hairpin-helix motif
RG54_RS07215	PF14520	Helix-hairpin-helix domain
RG54_RS07220	PF04354	ZipA, C-terminal FtsZ-binding domain
RG54_RS07225	PF07264	Etoposide-induced protein 2
RG54_RS07235	PF00291	Pyridoxal-phosphate dependent enzyme
RG54_RS07240	PF00381	PTS HPr component phosphorylation site
RG54_RS07245	PF00391	PEP-utilising enzyme, mobile domain
RG54_RS07245	PF02896	PEP-utilising enzyme, TIM barrel domain
RG54_RS07245	PF05524	PEP-utilising enzyme, N-terminal
RG54_RS07250	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
RG54_RS07255	PF08543	Phosphomethylpyrimidine kinase
RG54_RS07265	PF00291	Pyridoxal-phosphate dependent enzyme
RG54_RS07270	PF00005	ABC transporter
RG54_RS07270	PF12857	RG54_RS07270
RG54_RS07275	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS07280	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS07285	PF13531	Bacterial extracellular solute-binding protein
RG54_RS07290	PF13561	Enoyl-(Acyl carrier protein) reductase
RG54_RS07295	PF01380	SIS domain
RG54_RS07295	PF01418	Helix-turn-helix domain, rpiR family
RG54_RS07300	PF01380	SIS domain
RG54_RS07305	PF00367	phosphotransferase system, EIIB
RG54_RS07305	PF02378	Phosphotransferase system, EIIC
RG54_RS07310	PF00144	Beta-lactamase
RG54_RS07315	PF04261	Dyp-type peroxidase family
RG54_RS07320	PF06572	Protein of unknown function (DUF1131)
RG54_RS07325	PF11143	RG54_RS07325
RG54_RS07330	PF00583	Acetyltransferase (GNAT) family
RG54_RS07335	PF01520	N-acetylmuramoyl-L-alanine amidase
RG54_RS07340	PF01218	Coproporphyrinogen III oxidase
RG54_RS07345	PF12833	Helix-turn-helix domain
RG54_RS07350	PF00936	BMC domain
RG54_RS07350	PF16365	RG54_RS07350
RG54_RS07355	PF00936	BMC domain
RG54_RS07360	PF05985	Ethanolamine ammonia-lyase light chain (EutC)
RG54_RS07365	PF06751	Ethanolamine ammonia lyase large subunit (EutB)
RG54_RS07370	PF06277	Ethanolamine utilisation protein EutA
RG54_RS07375	PF04346	RG54_RS07375
RG54_RS07380	PF00465	Iron-containing alcohol dehydrogenase
RG54_RS07385	PF14450	Cell division protein FtsA
RG54_RS07390	PF00171	Aldehyde dehydrogenase family
RG54_RS07395	PF03319	Ethanolamine utilisation protein EutN/carboxysome
RG54_RS07400	PF00936	BMC domain
RG54_RS07405	PF01515	Phosphate acetyl/butaryl transferase
RG54_RS07410	PF01923	Cobalamin adenosyltransferase
RG54_RS07415	PF06249	Ethanolamine utilisation protein EutQ
RG54_RS07420	PF10662	Ethanolamine utilisation - propanediol utilisation
RG54_RS07425	PF00936	BMC domain
RG54_RS07430	PF00390	Malic enzyme, N-terminal domain
RG54_RS07430	PF01515	Phosphate acetyl/butaryl transferase
RG54_RS07430	PF03949	Malic enzyme, NAD binding domain
RG54_RS07435	PF00923	Transaldolase
RG54_RS07440	PF00456	Transketolase, thiamine diphosphate binding domain
RG54_RS07440	PF02779	Transketolase, pyrimidine binding domain
RG54_RS07440	PF02780	Transketolase, C-terminal domain
RG54_RS07445	PF06674	RG54_RS07445
RG54_RS07450	PF00293	NUDIX domain
RG54_RS07455	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RG54_RS07455	PF13247	4Fe-4S dicluster domain
RG54_RS07455	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
RG54_RS07460	PF00672	HAMP domain
RG54_RS07460	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS07460	PF07730	Histidine kinase
RG54_RS07460	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
RG54_RS07465	PF00873	AcrB/AcrD/AcrF family
RG54_RS07480	PF03960	ArsC family
RG54_RS07485	PF01546	Peptidase family M20/M25/M40
RG54_RS07485	PF07687	Peptidase dimerisation domain
RG54_RS07490	PF13980	RG54_RS07490
RG54_RS07495	PF02230	Phospholipase/Carboxylesterase
RG54_RS07500	PF05127	Helicase
RG54_RS07500	PF08351	Domain of unknown function (DUF1726)
RG54_RS07500	PF13718	GNAT acetyltransferase 2
RG54_RS07500	PF17176	RG54_RS07500
RG54_RS07505	PF04228	RG54_RS07505
RG54_RS07510	PF01850	PIN domain
RG54_RS07515	PF04014	Antidote-toxin recognition MazE
RG54_RS07520	PF01259	SAICAR synthetase
RG54_RS07530	PF06804	NlpB/DapX lipoprotein
RG54_RS07535	PF00701	Dihydrodipicolinate synthetase family
RG54_RS07540	PF01842	ACT domain
RG54_RS07540	PF13740	ACT domain
RG54_RS07545	PF00578	AhpC/TSA family
RG54_RS07550	PF00037	4Fe-4S binding domain
RG54_RS07550	PF12798	4Fe-4S binding domain
RG54_RS07555	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
RG54_RS07555	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
RG54_RS07560	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
RG54_RS07565	PF00146	NADH dehydrogenase
RG54_RS07580	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
RG54_RS07585	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
RG54_RS07590	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
RG54_RS07595	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
RG54_RS07595	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
RG54_RS07595	PF00374	Nickel-dependent hydrogenase
RG54_RS07600	PF12838	4Fe-4S dicluster domain
RG54_RS07610	PF07450	RG54_RS07610
RG54_RS07615	PF00158	Sigma-54 interaction domain
RG54_RS07615	PF01590	GAF domain
RG54_RS07615	PF02954	Bacterial regulatory protein, Fis family
RG54_RS07620	PF01226	Formate/nitrite transporter
RG54_RS07625	PF01226	Formate/nitrite transporter
RG54_RS07630	PF01594	RG54_RS07630
RG54_RS07635	PF01435	Peptidase family M48
RG54_RS07635	PF14559	Tetratricopeptide repeat
RG54_RS07640	PF03960	ArsC family
RG54_RS07645	PF00308	Bacterial dnaA  protein
RG54_RS07650	PF00860	Permease family
RG54_RS07655	PF14681	Uracil phosphoribosyltransferase
RG54_RS07665	PF00586	AIR synthase related protein, N-terminal domain
RG54_RS07665	PF02769	AIR synthase related protein, C-terminal domain
RG54_RS07670	PF00551	Formyl transferase
RG54_RS07675	PF02503	Polyphosphate kinase middle domain
RG54_RS07675	PF13089	Polyphosphate kinase N-terminal domain
RG54_RS07675	PF13090	Polyphosphate kinase C-terminal domain
RG54_RS07680	PF02541	Ppx/GppA phosphatase family
RG54_RS07685	PF00563	EAL domain
RG54_RS07685	PF05231	RG54_RS07685
RG54_RS07695	PF11119	RG54_RS07695
RG54_RS07705	PF05433	RG54_RS07705
RG54_RS07715	PF00117	Glutamine amidotransferase class-I
RG54_RS07715	PF00958	GMP synthase C terminal domain
RG54_RS07715	PF02540	NAD synthase
RG54_RS07720	PF00478	IMP dehydrogenase / GMP reductase domain
RG54_RS07720	PF00571	CBS domain
RG54_RS07725	PF02601	RG54_RS07725
RG54_RS07725	PF13742	RG54_RS07725
RG54_RS07730	PF07191	zinc-ribbons
RG54_RS07735	PF01926	50S ribosome-binding GTPase
RG54_RS07735	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
RG54_RS07740	PF13360	PQQ-like domain
RG54_RS07745	PF09976	Tetratricopeptide repeat
RG54_RS07750	PF03129	Anticodon binding domain
RG54_RS07750	PF13393	Histidyl-tRNA synthetase
RG54_RS07755	PF04551	GcpE protein
RG54_RS07760	PF13413	Helix-turn-helix domain
RG54_RS07760	PF13464	RG54_RS07760
RG54_RS07765	PF04055	Radical SAM superfamily
RG54_RS07770	PF00334	Nucleoside diphosphate kinase
RG54_RS07775	PF00905	Penicillin binding protein transpeptidase domain
RG54_RS07775	PF00912	Transglycosylase
RG54_RS07775	PF06832	RG54_RS07775
RG54_RS07780	PF00207	Alpha-2-macroglobulin family
RG54_RS07780	PF01835	MG2 domain
RG54_RS07780	PF07703	Alpha-2-macroglobulin family N-terminal region
RG54_RS07780	PF11974	Alpha-2-macroglobulin MG1 domain
RG54_RS07785	PF00581	Rhodanese-like domain
RG54_RS07790	PF07179	RG54_RS07790
RG54_RS07790	PF14581	RG54_RS07790
RG54_RS07795	PF00883	Cytosol aminopeptidase family, catalytic domain
RG54_RS07795	PF12404	RG54_RS07795
RG54_RS07800	PF04384	Iron-sulphur cluster assembly
RG54_RS07805	PF00111	2Fe-2S iron-sulfur cluster binding domain
RG54_RS07810	PF00012	Hsp70 protein
RG54_RS07815	PF07743	HSCB C-terminal oligomerisation domain
RG54_RS07820	PF01521	Iron-sulphur cluster biosynthesis
RG54_RS07825	PF01592	NifU-like N terminal domain
RG54_RS07830	PF00266	Aminotransferase class-V
RG54_RS07835	PF02082	Transcriptional regulator
RG54_RS07840	PF00588	SpoU rRNA Methylase family
RG54_RS07845	PF00459	Inositol monophosphatase family
RG54_RS07850	PF12146	Putative lysophospholipase
RG54_RS07855	PF00874	PRD domain
RG54_RS07860	PF12832	MFS_1 like family
RG54_RS07865	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS07865	PF03466	LysR substrate binding domain
RG54_RS07870	PF00355	Rieske [2Fe-2S] domain
RG54_RS07870	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
RG54_RS07875	PF00866	Ring hydroxylating beta subunit
RG54_RS07880	PF00355	Rieske [2Fe-2S] domain
RG54_RS07885	PF00106	short chain dehydrogenase
RG54_RS07890	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RG54_RS07890	PF14759	Reductase C-terminal
RG54_RS07895	PF07681	RG54_RS07895
RG54_RS07900	PF01263	Aldose 1-epimerase
RG54_RS07905	PF00107	Zinc-binding dehydrogenase
RG54_RS07905	PF08240	Alcohol dehydrogenase GroES-like domain
RG54_RS07910	PF02653	RG54_RS07910
RG54_RS07915	PF00005	ABC transporter
RG54_RS07920	PF13407	Periplasmic binding protein domain
RG54_RS07925	PF13432	Tetratricopeptide repeat
RG54_RS07925	PF17128	RG54_RS07925
RG54_RS07930	PF00480	ROK family
RG54_RS07935	PF00464	Serine hydroxymethyltransferase
RG54_RS07945	PF00042	Globin
RG54_RS07945	PF00175	Oxidoreductase NAD-binding domain
RG54_RS07945	PF00970	Oxidoreductase FAD-binding domain
RG54_RS07950	PF00543	Nitrogen regulatory protein P-II
RG54_RS07955	PF00072	Response regulator receiver domain
RG54_RS07955	PF00158	Sigma-54 interaction domain
RG54_RS07960	PF13942	RG54_RS07960
RG54_RS07965	PF00512	His Kinase A (phospho-acceptor) domain
RG54_RS07965	PF00672	HAMP domain
RG54_RS07965	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS07970	PF02769	AIR synthase related protein, C-terminal domain
RG54_RS07970	PF13507	CobB/CobQ-like glutamine amidotransferase domain
RG54_RS07980	PF00497	Bacterial extracellular solute-binding proteins, family 3
RG54_RS07980	PF01464	Transglycosylase SLT domain
RG54_RS07985	PF14437	RG54_RS07985
RG54_RS07990	PF12710	haloacid dehalogenase-like hydrolase
RG54_RS07995	PF01380	SIS domain
RG54_RS07995	PF01418	Helix-turn-helix domain, rpiR family
RG54_RS08000	PF00037	4Fe-4S binding domain
RG54_RS08020	PF01648	4'-phosphopantetheinyl transferase superfamily
RG54_RS08025	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
RG54_RS08030	PF02565	Recombination protein O C terminal
RG54_RS08030	PF11967	Recombination protein O N terminal
RG54_RS08035	PF01926	50S ribosome-binding GTPase
RG54_RS08035	PF07650	KH domain
RG54_RS08040	PF00035	Double-stranded RNA binding motif
RG54_RS08040	PF14622	Ribonuclease-III-like
RG54_RS08050	PF00717	Peptidase S24-like
RG54_RS08050	PF10502	Signal peptidase, peptidase S26
RG54_RS08055	PF00009	Elongation factor Tu GTP binding domain
RG54_RS08055	PF00679	Elongation factor G C-terminus
RG54_RS08055	PF03144	Elongation factor Tu domain 2
RG54_RS08055	PF06421	GTP-binding protein LepA C-terminus
RG54_RS08060	PF04246	RG54_RS08060
RG54_RS08065	PF03888	MucB/RseB family
RG54_RS08065	PF17188	RG54_RS08065
RG54_RS08070	PF03872	Anti sigma-E protein RseA, N-terminal domain
RG54_RS08070	PF03873	Anti sigma-E protein RseA, C-terminal domain
RG54_RS08075	PF04542	Sigma-70 region 2
RG54_RS08075	PF08281	Sigma-70, region 4
RG54_RS08085	PF00890	FAD binding domain
RG54_RS08085	PF02910	Fumarate reductase flavoprotein C-term
RG54_RS08090	PF05175	Methyltransferase small domain
RG54_RS08095	PF00270	DEAD/DEAH box helicase
RG54_RS08095	PF00271	Helicase conserved C-terminal domain
RG54_RS08100	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS08100	PF03466	LysR substrate binding domain
RG54_RS08105	PF01810	RG54_RS08105
RG54_RS08110	PF01228	Glycine radical
RG54_RS08120	PF03167	Uracil DNA glycosylase superfamily
RG54_RS08125	PF00588	SpoU rRNA Methylase family
RG54_RS08125	PF08032	RNA 2'-O ribose methyltransferase substrate binding
RG54_RS08130	PF00085	Thioredoxin
RG54_RS08135	PF03942	RG54_RS08135
RG54_RS08140	PF00583	Acetyltransferase (GNAT) family
RG54_RS08140	PF13380	CoA binding domain
RG54_RS08140	PF13549	ATP-grasp domain
RG54_RS08140	PF13607	Succinyl-CoA ligase like flavodoxin domain
RG54_RS08145	PF13091	PLD-like domain
RG54_RS08150	PF10043	RG54_RS08150
RG54_RS08155	PF00083	Sugar (and other) transporter
RG54_RS08190	PF00004	ATPase family associated with various cellular activities (AAA)
RG54_RS08190	PF02861	Clp amino terminal domain
RG54_RS08190	PF07724	AAA domain (Cdc48 subfamily)
RG54_RS08190	PF10431	C-terminal, D2-small domain, of ClpB protein
RG54_RS08195	PF02578	Multi-copper polyphenol oxidoreductase laccase
RG54_RS08200	PF00849	RNA pseudouridylate synthase
RG54_RS08200	PF01479	S4 domain
RG54_RS08205	PF13525	Outer membrane lipoprotein
RG54_RS08215	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
RG54_RS08220	PF00800	Prephenate dehydratase
RG54_RS08220	PF01817	Chorismate mutase type II
RG54_RS08225	PF01817	Chorismate mutase type II
RG54_RS08225	PF02153	Prephenate dehydrogenase
RG54_RS08230	PF00793	DAHP synthetase I family
RG54_RS08235	PF10973	RG54_RS08235
RG54_RS08240	PF13689	RG54_RS08240
RG54_RS08245	PF00990	GGDEF domain
RG54_RS08245	PF17152	RG54_RS08245
RG54_RS08250	PF00691	OmpA family
RG54_RS08255	PF01245	Ribosomal protein L19
RG54_RS08260	PF01746	tRNA (Guanine-1)-methyltransferase
RG54_RS08265	PF01782	RimM N-terminal domain
RG54_RS08265	PF05239	PRC-barrel domain
RG54_RS08270	PF00886	Ribosomal protein S16
RG54_RS08275	PF00448	SRP54-type protein, GTPase domain
RG54_RS08275	PF02881	SRP54-type protein, helical bundle domain
RG54_RS08275	PF02978	Signal peptide binding domain
RG54_RS08280	PF01578	RG54_RS08280
RG54_RS08285	PF00571	CBS domain
RG54_RS08285	PF01595	RG54_RS08285
RG54_RS08285	PF03471	Transporter associated domain
RG54_RS08295	PF01025	GrpE
RG54_RS08305	PF01513	ATP-NAD kinase
RG54_RS08310	PF02463	RecF/RecN/SMC N terminal domain
RG54_RS08315	PF04355	SmpA / OmlA family
RG54_RS08320	PF03658	RnfH family Ubiquitin
RG54_RS08325	PF03364	Polyketide cyclase / dehydrase and lipid transport
RG54_RS08330	PF01668	SmpB protein
RG54_RS08340	PF03212	Pertactin
RG54_RS08340	PF03797	Autotransporter beta-domain
RG54_RS08340	PF16168	RG54_RS08340
RG54_RS08350	PF00239	Resolvase, N terminal domain
RG54_RS08380	PF00128	Alpha amylase, catalytic domain
RG54_RS08385	PF02806	Alpha amylase, C-terminal all-beta domain
RG54_RS08390	PF08943	CsiD
RG54_RS08395	PF01266	FAD dependent oxidoreductase
RG54_RS08400	PF00171	Aldehyde dehydrogenase family
RG54_RS08405	PF00202	Aminotransferase class-III
RG54_RS08410	PF00324	Amino acid permease
RG54_RS08415	PF00392	Bacterial regulatory proteins, gntR family
RG54_RS08415	PF07729	FCD domain
RG54_RS08420	PF01476	LysM domain
RG54_RS08420	PF04972	BON domain
RG54_RS08425	PF01679	RG54_RS08425
RG54_RS08430	PF01022	Bacterial regulatory protein, arsR family
RG54_RS08435	PF00581	Rhodanese-like domain
RG54_RS08435	PF11127	Protein of unknown function (DUF2892)
RG54_RS08440	PF00816	H-NS histone family
RG54_RS08445	PF06610	RG54_RS08445
RG54_RS08450	PF09400	Protein of unknown function (DUF2002)
RG54_RS08455	PF05957	RG54_RS08455
RG54_RS08460	PF00462	Glutaredoxin
RG54_RS08465	PF07972	NrdI Flavodoxin like
RG54_RS08470	PF00317	Ribonucleotide reductase, all-alpha domain
RG54_RS08470	PF02867	Ribonucleotide reductase, barrel domain
RG54_RS08470	PF08343	Ribonucleotide reductase N-terminal
RG54_RS08475	PF00268	Ribonucleotide reductase, small chain
RG54_RS08480	PF00005	ABC transporter
RG54_RS08480	PF00571	CBS domain
RG54_RS08485	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS08490	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
RG54_RS08495	PF07690	Major Facilitator Superfamily
RG54_RS08500	PF03591	RG54_RS08500
RG54_RS08505	PF05437	RG54_RS08505
RG54_RS08510	PF01047	MarR family
RG54_RS08515	PF00529	HlyD family secretion protein
RG54_RS08515	PF16576	RG54_RS08515
RG54_RS08520	PF07690	Major Facilitator Superfamily
RG54_RS08525	PF02664	S-Ribosylhomocysteinase (LuxS)
RG54_RS08530	PF04262	Glutamate-cysteine ligase
RG54_RS08535	PF09335	RG54_RS08535
RG54_RS08540	PF13419	Haloacid dehalogenase-like hydrolase
RG54_RS08570	PF02599	Global regulator protein family
RG54_RS08575	PF01411	tRNA synthetases class II (A)
RG54_RS08575	PF02272	DHHA1 domain
RG54_RS08575	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
RG54_RS08585	PF02631	RecX family
RG54_RS08590	PF00154	recA bacterial DNA recombination protein
RG54_RS08595	PF02464	Competence-damaged protein
RG54_RS08600	PF13406	Transglycosylase SLT domain
RG54_RS08605	PF03608	RG54_RS08605
RG54_RS08610	PF03612	RG54_RS08610
RG54_RS08610	PF07663	RG54_RS08610
RG54_RS08615	PF03829	PTS system glucitol/sorbitol-specific IIA component
RG54_RS08620	PF00106	short chain dehydrogenase
RG54_RS08625	PF06923	RG54_RS08625
RG54_RS08630	PF00455	RG54_RS08630
RG54_RS08630	PF08220	DeoR-like helix-turn-helix domain
RG54_RS08635	PF00571	CBS domain
RG54_RS08635	PF01380	SIS domain
RG54_RS08640	PF00158	Sigma-54 interaction domain
RG54_RS08640	PF01590	GAF domain
RG54_RS08645	PF00258	Flavodoxin
RG54_RS08645	PF00301	Rubredoxin
RG54_RS08645	PF00753	Metallo-beta-lactamase superfamily
RG54_RS08650	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RG54_RS08660	PF00708	Acylphosphatase
RG54_RS08660	PF01300	Telomere recombination
RG54_RS08660	PF07503	HypF finger
RG54_RS08665	PF12798	4Fe-4S binding domain
RG54_RS08665	PF12800	4Fe-4S binding domain
RG54_RS08665	PF13247	4Fe-4S dicluster domain
RG54_RS08670	PF00356	Bacterial regulatory proteins, lacI family
RG54_RS08670	PF13377	Periplasmic binding protein-like domain
RG54_RS08675	PF00367	phosphotransferase system, EIIB
RG54_RS08675	PF02378	Phosphotransferase system, EIIC
RG54_RS08680	PF00232	Glycosyl hydrolase family 1
RG54_RS08685	PF01381	Helix-turn-helix
RG54_RS08695	PF01750	Hydrogenase maturation protease
RG54_RS08700	PF07450	RG54_RS08700
RG54_RS08705	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
RG54_RS08710	PF12838	4Fe-4S dicluster domain
RG54_RS08715	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
RG54_RS08715	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
RG54_RS08715	PF00374	Nickel-dependent hydrogenase
RG54_RS08720	PF00146	NADH dehydrogenase
RG54_RS08725	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
RG54_RS08730	PF13247	4Fe-4S dicluster domain
RG54_RS08740	PF11046	RG54_RS08740
RG54_RS08745	PF01155	Hydrogenase expression/synthesis hypA family
RG54_RS08750	PF02492	CobW/HypB/UreG, nucleotide-binding domain
RG54_RS08755	PF01455	HupF/HypC family
RG54_RS08760	PF01924	Hydrogenase formation hypA family
RG54_RS08765	PF00586	AIR synthase related protein, N-terminal domain
RG54_RS08765	PF02769	AIR synthase related protein, C-terminal domain
RG54_RS08770	PF00158	Sigma-54 interaction domain
RG54_RS08770	PF01590	GAF domain
RG54_RS08770	PF02954	Bacterial regulatory protein, Fis family
RG54_RS08775	PF11756	RG54_RS08775
RG54_RS08780	PF00488	MutS domain V
RG54_RS08780	PF01624	MutS domain I
RG54_RS08780	PF05188	MutS domain II
RG54_RS08780	PF05190	MutS family domain IV
RG54_RS08780	PF05192	MutS domain III
RG54_RS08785	PF00149	Calcineurin-like phosphoesterase
RG54_RS08790	PF00455	RG54_RS08790
RG54_RS08790	PF08220	DeoR-like helix-turn-helix domain
RG54_RS08795	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
RG54_RS08795	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
RG54_RS08800	PF07005	Protein of unknown function, DUF1537
RG54_RS08800	PF17042	RG54_RS08800
RG54_RS08805	PF00596	Class II Aldolase and Adducin N-terminal domain
RG54_RS08810	PF01261	Xylose isomerase-like TIM barrel
RG54_RS08815	PF02447	RG54_RS08815
RG54_RS08825	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
RG54_RS08830	PF02441	Flavoprotein
RG54_RS08835	PF01047	MarR family
RG54_RS08840	PF00140	Sigma-70 factor, region 1
RG54_RS08840	PF04539	Sigma-70 region 3
RG54_RS08840	PF04542	Sigma-70 region 2
RG54_RS08840	PF04545	Sigma-70, region 4
RG54_RS08845	PF01476	LysM domain
RG54_RS08845	PF01551	Peptidase family M23
RG54_RS08850	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
RG54_RS08855	PF01975	Survival protein SurE
RG54_RS08860	PF01142	tRNA pseudouridine synthase D (TruD)
RG54_RS08865	PF02542	YgbB family
RG54_RS08870	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
RG54_RS08875	PF04977	Septum formation initiator
RG54_RS08880	PF12084	RG54_RS08880
RG54_RS08885	PF01583	Adenylylsulphate kinase
RG54_RS08890	PF00009	Elongation factor Tu GTP binding domain
RG54_RS08895	PF01507	Phosphoadenosine phosphosulfate reductase family
RG54_RS08900	PF04389	Peptidase family M28
RG54_RS08905	PF09707	CRISPR-associated protein (Cas_Cas2CT1978)
RG54_RS08910	PF01867	CRISPR associated protein Cas1
RG54_RS08915	PF08798	CRISPR associated protein
RG54_RS08920	PF09704	CRISPR-associated protein (Cas_Cas5)
RG54_RS08925	PF09344	CT1975-like protein
RG54_RS08935	PF09485	CRISPR-associated protein Cse2 (CRISPR_cse2)
RG54_RS08940	PF09481	CRISPR-associated protein Cse1 (CRISPR_cse1)
RG54_RS08950	PF01848	RG54_RS08950
RG54_RS08955	PF01507	Phosphoadenosine phosphosulfate reductase family
RG54_RS08960	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
RG54_RS08960	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
RG54_RS08965	PF00175	Oxidoreductase NAD-binding domain
RG54_RS08965	PF00258	Flavodoxin
RG54_RS08965	PF00667	FAD binding domain
RG54_RS08970	PF01242	6-pyruvoyl tetrahydropterin synthase
RG54_RS08975	PF12831	FAD dependent oxidoreductase
RG54_RS08985	PF04309	Glycerol-3-phosphate responsive antiterminator
RG54_RS08990	PF00766	Electron transfer flavoprotein FAD-binding domain
RG54_RS08990	PF01012	Electron transfer flavoprotein domain
RG54_RS08995	PF01012	Electron transfer flavoprotein domain
RG54_RS09000	PF00083	Sugar (and other) transporter
RG54_RS09005	PF01565	FAD binding domain
RG54_RS09005	PF02913	FAD linked oxidases, C-terminal domain
RG54_RS09010	PF13561	Enoyl-(Acyl carrier protein) reductase
RG54_RS09015	PF07690	Major Facilitator Superfamily
RG54_RS09020	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
RG54_RS09020	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
RG54_RS09025	PF04055	Radical SAM superfamily
RG54_RS09025	PF13394	4Fe-4S single cluster domain
RG54_RS09040	PF00113	Enolase, C-terminal TIM barrel domain
RG54_RS09040	PF03952	Enolase, N-terminal domain
RG54_RS09045	PF00117	Glutamine amidotransferase class-I
RG54_RS09045	PF06418	CTP synthase N-terminus
RG54_RS09050	PF03819	MazG nucleotide pyrophosphohydrolase domain
RG54_RS09055	PF02452	PemK-like protein
RG54_RS09060	PF04014	Antidote-toxin recognition MazE
RG54_RS09065	PF02824	TGS domain
RG54_RS09065	PF04607	Region found in RelA / SpoT proteins
RG54_RS09065	PF13291	ACT domain
RG54_RS09065	PF13328	HD domain
RG54_RS09070	PF01938	TRAM domain
RG54_RS09070	PF05958	tRNA (Uracil-5-)-methyltransferase
RG54_RS09075	PF00072	Response regulator receiver domain
RG54_RS09075	PF00512	His Kinase A (phospho-acceptor) domain
RG54_RS09075	PF00672	HAMP domain
RG54_RS09075	PF01627	Hpt domain
RG54_RS09075	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS09075	PF09984	RG54_RS09075
RG54_RS09080	PF13378	Enolase C-terminal domain-like
RG54_RS09085	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
RG54_RS09085	PF13378	Enolase C-terminal domain-like
RG54_RS09090	PF07690	Major Facilitator Superfamily
RG54_RS09095	PF00258	Flavodoxin
RG54_RS09100	PF00849	RNA pseudouridylate synthase
RG54_RS09105	PF04287	tRNA pseudouridine synthase C
RG54_RS09115	PF07348	Syd protein (SUKH-2)
RG54_RS09120	PF14489	QueF-like protein
RG54_RS09120	PF14819	Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
RG54_RS09125	PF03641	Possible lysine decarboxylase
RG54_RS09125	PF11892	Domain of unknown function (DUF3412)
RG54_RS09125	PF14793	Domain of unknown function (DUF4478)
RG54_RS09135	PF03313	RG54_RS09135
RG54_RS09135	PF03315	Serine dehydratase beta chain
RG54_RS09140	PF01367	5'-3' exonuclease, C-terminal SAM fold
RG54_RS09140	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
RG54_RS09145	PF00465	Iron-containing alcohol dehydrogenase
RG54_RS09150	PF00596	Class II Aldolase and Adducin N-terminal domain
RG54_RS09155	PF07690	Major Facilitator Superfamily
RG54_RS09160	PF02952	L-fucose isomerase, C-terminal domain
RG54_RS09160	PF07881	L-fucose isomerase, first N-terminal domain
RG54_RS09160	PF07882	L-fucose isomerase, second N-terminal domain
RG54_RS09165	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
RG54_RS09165	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
RG54_RS09170	PF05025	RbsD / FucU transport protein family
RG54_RS09175	PF00455	RG54_RS09175
RG54_RS09175	PF08220	DeoR-like helix-turn-helix domain
RG54_RS09180	PF01728	FtsJ-like methyltransferase
RG54_RS09185	PF04241	RG54_RS09185
RG54_RS09190	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS09190	PF03466	LysR substrate binding domain
RG54_RS09195	PF06004	Bacterial protein of unknown function (DUF903)
RG54_RS09200	PF00266	Aminotransferase class-V
RG54_RS09205	PF02657	Fe-S metabolism associated domain
RG54_RS09210	PF00899	ThiF family
RG54_RS09215	PF03562	MltA specific insert domain
RG54_RS09215	PF06725	3D domain
RG54_RS09240	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
RG54_RS09240	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
RG54_RS09245	PF01380	SIS domain
RG54_RS09250	PF00155	Aminotransferase class I and II
RG54_RS09255	PF00367	phosphotransferase system, EIIB
RG54_RS09255	PF02378	Phosphotransferase system, EIIC
RG54_RS09260	PF00874	PRD domain
RG54_RS09260	PF03123	CAT RNA binding domain
RG54_RS09265	PF01520	N-acetylmuramoyl-L-alanine amidase
RG54_RS09265	PF11741	AMIN domain
RG54_RS09270	PF00583	Acetyltransferase (GNAT) family
RG54_RS09270	PF00696	Amino acid kinase family
RG54_RS09275	PF13538	UvrD-like helicase C-terminal domain
RG54_RS09275	PF13604	AAA domain
RG54_RS09280	PF00580	UvrD/REP helicase N-terminal domain
RG54_RS09280	PF12705	PD-(D/E)XK nuclease superfamily
RG54_RS09280	PF13361	UvrD-like helicase C-terminal domain
RG54_RS09285	PF00675	Insulinase (Peptidase family M16)
RG54_RS09285	PF05193	Peptidase M16 inactive domain
RG54_RS09285	PF16187	RG54_RS09285
RG54_RS09290	PF04257	Exodeoxyribonuclease V, gamma subunit
RG54_RS09295	PF12528	RG54_RS09295
RG54_RS09295	PF13544	RG54_RS09295
RG54_RS09300	PF10713	RG54_RS09300
RG54_RS09305	PF13633	Prokaryotic N-terminal methylation site
RG54_RS09310	PF13544	RG54_RS09310
RG54_RS09315	PF00303	Thymidylate synthase
RG54_RS09320	PF01790	RG54_RS09320
RG54_RS09325	PF00391	PEP-utilising enzyme, mobile domain
RG54_RS09325	PF01590	GAF domain
RG54_RS09325	PF02896	PEP-utilising enzyme, TIM barrel domain
RG54_RS09325	PF05524	PEP-utilising enzyme, N-terminal
RG54_RS09330	PF00293	NUDIX domain
RG54_RS09345	PF02976	DNA mismatch repair enzyme MutH
RG54_RS09350	PF03741	RG54_RS09350
RG54_RS09355	PF06004	Bacterial protein of unknown function (DUF903)
RG54_RS09360	PF00248	Aldo/keto reductase family
RG54_RS09365	PF07690	Major Facilitator Superfamily
RG54_RS09370	PF00501	AMP-binding enzyme
RG54_RS09370	PF01553	Acyltransferase
RG54_RS09380	PF00356	Bacterial regulatory proteins, lacI family
RG54_RS09380	PF13377	Periplasmic binding protein-like domain
RG54_RS09385	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
RG54_RS09385	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
RG54_RS09390	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS09390	PF03466	LysR substrate binding domain
RG54_RS09395	PF01177	Asp/Glu/Hydantoin racemase
RG54_RS09400	PF00083	Sugar (and other) transporter
RG54_RS09405	PF13561	Enoyl-(Acyl carrier protein) reductase
RG54_RS09410	PF04962	KduI/IolB family
RG54_RS09415	PF00108	Thiolase, N-terminal domain
RG54_RS09415	PF02803	Thiolase, C-terminal domain
RG54_RS09420	PF03222	Tryptophan/tyrosine permease family
RG54_RS09425	PF00196	Bacterial regulatory proteins, luxR family
RG54_RS09430	PF00486	Transcriptional regulatory protein, C terminal
RG54_RS09455	PF07720	Tetratricopeptide repeat
RG54_RS09465	PF00486	Transcriptional regulatory protein, C terminal
RG54_RS09475	PF01464	Transglycosylase SLT domain
RG54_RS09480	PF00196	Bacterial regulatory proteins, luxR family
RG54_RS09495	PF09482	RG54_RS09495
RG54_RS09500	PF01514	Secretory protein of YscJ/FliF family
RG54_RS09515	PF09480	Type III secretion system protein PrgH-EprH (PrgH)
RG54_RS09520	PF00196	Bacterial regulatory proteins, luxR family
RG54_RS09525	PF04741	RG54_RS09525
RG54_RS09535	PF01311	RG54_RS09535
RG54_RS09540	PF01313	RG54_RS09540
RG54_RS09545	PF00813	RG54_RS09545
RG54_RS09550	PF01052	Surface presentation of antigens (SPOA)
RG54_RS09560	PF00723	Glycosyl hydrolases family 15
RG54_RS09570	PF01476	LysM domain
RG54_RS09570	PF01551	Peptidase family M23
RG54_RS09580	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
RG54_RS09580	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
RG54_RS09585	PF00941	FAD binding domain in molybdopterin dehydrogenase
RG54_RS09585	PF03450	CO dehydrogenase flavoprotein C-terminal domain
RG54_RS09590	PF00111	2Fe-2S iron-sulfur cluster binding domain
RG54_RS09590	PF01799	[2Fe-2S] binding domain
RG54_RS09595	PF00158	Sigma-54 interaction domain
RG54_RS09595	PF02954	Bacterial regulatory protein, Fis family
RG54_RS09595	PF13188	PAS domain
RG54_RS09600	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
RG54_RS09600	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
RG54_RS09605	PF00291	Pyridoxal-phosphate dependent enzyme
RG54_RS09610	PF01546	Peptidase family M20/M25/M40
RG54_RS09610	PF07687	Peptidase dimerisation domain
RG54_RS09615	PF01979	Amidohydrolase family
RG54_RS09620	PF00696	Amino acid kinase family
RG54_RS09625	PF02625	XdhC and CoxI family
RG54_RS09625	PF13478	XdhC Rossmann domain
RG54_RS09635	PF12804	MobA-like NTP transferase domain
RG54_RS09640	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RG54_RS09640	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
RG54_RS09645	PF01979	Amidohydrolase family
RG54_RS09650	PF00941	FAD binding domain in molybdopterin dehydrogenase
RG54_RS09650	PF03450	CO dehydrogenase flavoprotein C-terminal domain
RG54_RS09655	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
RG54_RS09655	PF01799	[2Fe-2S] binding domain
RG54_RS09655	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
RG54_RS09660	PF00860	Permease family
RG54_RS09665	PF01979	Amidohydrolase family
RG54_RS09670	PF00860	Permease family
RG54_RS09675	PF13247	4Fe-4S dicluster domain
RG54_RS09680	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RG54_RS09680	PF13247	4Fe-4S dicluster domain
RG54_RS09680	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
RG54_RS09690	PF00860	Permease family
RG54_RS09700	PF00293	NUDIX domain
RG54_RS09705	PF00152	tRNA synthetases class II (D, K and N)
RG54_RS09705	PF01336	OB-fold nucleic acid binding domain
RG54_RS09715	PF01368	DHH family
RG54_RS09715	PF02272	DHHA1 domain
RG54_RS09720	PF10411	Disulfide bond isomerase protein N-terminus
RG54_RS09720	PF13098	Thioredoxin-like domain
RG54_RS09725	PF00589	Phage integrase family
RG54_RS09725	PF02899	Phage integrase, N-terminal SAM-like domain
RG54_RS09730	PF00258	Flavodoxin
RG54_RS09735	PF07254	RG54_RS09735
RG54_RS09740	PF03937	Flavinator of succinate dehydrogenase
RG54_RS09745	PF01571	Aminomethyltransferase folate-binding domain
RG54_RS09750	PF03006	RG54_RS09750
RG54_RS09755	PF04266	ASCH domain
RG54_RS09760	PF00232	Glycosyl hydrolase family 1
RG54_RS09765	PF13561	Enoyl-(Acyl carrier protein) reductase
RG54_RS09770	PF02347	Glycine cleavage system P-protein
RG54_RS09775	PF01597	Glycine cleavage H-protein
RG54_RS09780	PF01571	Aminomethyltransferase folate-binding domain
RG54_RS09780	PF08669	Glycine cleavage T-protein C-terminal barrel domain
RG54_RS09785	PF01494	FAD binding domain
RG54_RS09790	PF01494	FAD binding domain
RG54_RS09795	PF00557	Metallopeptidase family M24
RG54_RS09795	PF05195	Aminopeptidase P, N-terminal domain
RG54_RS09800	PF03695	Uncharacterised protein family (UPF0149)
RG54_RS09810	PF05164	Cell division protein ZapA
RG54_RS09820	PF01812	5-formyltetrahydrofolate cyclo-ligase family
RG54_RS09825	PF13956	RG54_RS09825
RG54_RS09835	PF13956	RG54_RS09835
RG54_RS09840	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
RG54_RS09840	PF01842	ACT domain
RG54_RS09840	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
RG54_RS09845	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
RG54_RS09855	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS09855	PF03466	LysR substrate binding domain
RG54_RS09865	PF01642	Methylmalonyl-CoA mutase
RG54_RS09865	PF02310	B12 binding domain
RG54_RS09870	PF03308	ArgK protein
RG54_RS09875	PF00378	Enoyl-CoA hydratase/isomerase family
RG54_RS09885	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS09885	PF03466	LysR substrate binding domain
RG54_RS09890	PF04402	Protein of unknown function (DUF541)
RG54_RS09895	PF01810	RG54_RS09895
RG54_RS09900	PF00924	Mechanosensitive ion channel
RG54_RS09900	PF05552	Conserved TM helix
RG54_RS09905	PF01116	Fructose-bisphosphate aldolase class-II
RG54_RS09910	PF00162	Phosphoglycerate kinase
RG54_RS09915	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
RG54_RS09915	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
RG54_RS09925	PF03479	Domain of unknown function (DUF296)
RG54_RS09930	PF12822	Protein of unknown function (DUF3816)
RG54_RS09935	PF02361	Cobalt transport protein
RG54_RS09940	PF00005	ABC transporter
RG54_RS09945	PF00005	ABC transporter
RG54_RS09955	PF05068	Mannitol repressor
RG54_RS09960	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
RG54_RS09965	PF00107	Zinc-binding dehydrogenase
RG54_RS09965	PF08240	Alcohol dehydrogenase GroES-like domain
RG54_RS09970	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
RG54_RS09970	PF02378	Phosphotransferase system, EIIC
RG54_RS09975	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
RG54_RS09980	PF00456	Transketolase, thiamine diphosphate binding domain
RG54_RS09980	PF02779	Transketolase, pyrimidine binding domain
RG54_RS09980	PF02780	Transketolase, C-terminal domain
RG54_RS09985	PF01435	Peptidase family M48
RG54_RS09990	PF07071	Protein of unknown function (DUF1341)
RG54_RS09995	PF03841	L-seryl-tRNA selenium transferase
RG54_RS10000	PF03613	RG54_RS10000
RG54_RS10005	PF03609	RG54_RS10005
RG54_RS10010	PF03830	PTS system sorbose subfamily IIB component
RG54_RS10015	PF03610	PTS system fructose IIA component
RG54_RS10025	PF00491	Arginase family
RG54_RS10035	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
RG54_RS10035	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
RG54_RS10040	PF11036	RG54_RS10040
RG54_RS10050	PF10885	RG54_RS10050
RG54_RS10055	PF00438	S-adenosylmethionine synthetase, N-terminal domain
RG54_RS10055	PF02772	S-adenosylmethionine synthetase, central domain
RG54_RS10055	PF02773	S-adenosylmethionine synthetase, C-terminal domain
RG54_RS10065	PF00083	Sugar (and other) transporter
RG54_RS10070	PF10263	RG54_RS10070
RG54_RS10075	PF04231	Endonuclease I
RG54_RS10080	PF04452	RNA methyltransferase
RG54_RS10085	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
RG54_RS10085	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
RG54_RS10090	PF02622	Uncharacterized ACR, COG1678
RG54_RS10095	PF03652	Uncharacterised protein family (UPF0081)
RG54_RS10100	PF00437	Type II/IV secretion system protein
RG54_RS10105	PF01168	Alanine racemase, N-terminal domain
RG54_RS10110	PF02325	RG54_RS10110
RG54_RS10115	PF02594	Uncharacterised ACR, YggU family COG1872
RG54_RS10120	PF01725	Ham1 family
RG54_RS10125	PF04055	Radical SAM superfamily
RG54_RS10130	PF03480	Bacterial extracellular solute-binding protein, family 7
RG54_RS10135	PF04290	RG54_RS10135
RG54_RS10140	PF06808	RG54_RS10140
RG54_RS10145	PF06717	RG54_RS10145
RG54_RS10150	PF00710	Asparaginase
RG54_RS10155	PF11101	RG54_RS10155
RG54_RS10160	PF04320	RG54_RS10160
RG54_RS10165	PF02390	Putative methyltransferase
RG54_RS10175	PF00633	Helix-hairpin-helix motif
RG54_RS10175	PF00730	HhH-GPD superfamily base excision DNA repair protein
RG54_RS10175	PF10576	Iron-sulfur binding domain of endonuclease III
RG54_RS10175	PF14815	NUDIX domain
RG54_RS10180	PF04362	Bacterial Fe(2+) trafficking
RG54_RS10185	PF01464	Transglycosylase SLT domain
RG54_RS10185	PF11873	Domain of unknown function (DUF3393)
RG54_RS10190	PF03825	RG54_RS10190
RG54_RS10195	PF01276	Orn/Lys/Arg decarboxylase, major domain
RG54_RS10195	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
RG54_RS10195	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
RG54_RS10205	PF04474	RG54_RS10205
RG54_RS10215	PF00589	Phage integrase family
RG54_RS10215	PF13356	Domain of unknown function (DUF4102)
RG54_RS10225	PF01381	Helix-turn-helix
RG54_RS10225	PF06114	Domain of unknown function (DUF955)
RG54_RS10250	PF06812	RG54_RS10250
RG54_RS10250	PF12486	RG54_RS10250
RG54_RS10260	PF08378	RG54_RS10260
RG54_RS10260	PF13361	UvrD-like helicase C-terminal domain
RG54_RS10260	PF13538	UvrD-like helicase C-terminal domain
RG54_RS10265	PF10544	RG54_RS10265
RG54_RS10280	PF04591	Protein of unknown function, DUF596
RG54_RS10300	PF13930	DNA/RNA non-specific endonuclease
RG54_RS10305	PF04829	RG54_RS10305
RG54_RS10315	PF14206	RG54_RS10315
RG54_RS10330	PF15530	RG54_RS10330
RG54_RS10340	PF14437	RG54_RS10340
RG54_RS10345	PF04829	RG54_RS10345
RG54_RS10345	PF05594	RG54_RS10345
RG54_RS10345	PF05860	haemagglutination activity domain
RG54_RS10345	PF13018	RG54_RS10345
RG54_RS10345	PF13332	RG54_RS10345
RG54_RS10350	PF02794	RG54_RS10350
RG54_RS10355	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
RG54_RS10355	PF08479	POTRA domain, ShlB-type
RG54_RS10360	PF13973	RG54_RS10360
RG54_RS10380	PF11682	RG54_RS10380
RG54_RS10385	PF11682	RG54_RS10385
RG54_RS10395	PF11726	RG54_RS10395
RG54_RS10410	PF05321	Haemolysin expression modulating protein
RG54_RS10425	PF05930	Prophage CP4-57 regulatory protein (AlpA)
RG54_RS10445	PF01695	IstB-like ATP binding protein
RG54_RS10450	PF13817	RG54_RS10450
RG54_RS10455	PF03050	RG54_RS10455
RG54_RS10455	PF13005	RG54_RS10455
RG54_RS10455	PF13007	RG54_RS10455
RG54_RS10460	PF13817	RG54_RS10460
RG54_RS10470	PF05717	RG54_RS10470
RG54_RS10475	PF01527	Transposase
RG54_RS10485	PF05717	RG54_RS10485
RG54_RS10490	PF01527	Transposase
RG54_RS10500	PF00665	Integrase core domain
RG54_RS10500	PF13276	RG54_RS10500
RG54_RS10505	PF01527	Transposase
RG54_RS10520	PF01926	50S ribosome-binding GTPase
RG54_RS10525	PF03797	Autotransporter beta-domain
RG54_RS10525	PF13018	RG54_RS10525
RG54_RS10525	PF16168	RG54_RS10525
RG54_RS10550	PF06067	RG54_RS10550
RG54_RS10560	PF03230	Antirestriction protein
RG54_RS10565	PF04002	RadC-like JAB domain
RG54_RS10570	PF06174	RG54_RS10570
RG54_RS10580	PF06154	YagB/YeeU/YfjZ family
RG54_RS10585	PF06755	RG54_RS10585
RG54_RS10600	PF06117	RG54_RS10600
RG54_RS10605	PF13708	RG54_RS10605
RG54_RS10610	PF04612	Type II secretion system (T2SS), protein M
RG54_RS10615	PF05134	Type II secretion system (T2SS), protein L
RG54_RS10615	PF12693	GspL periplasmic domain
RG54_RS10620	PF03934	Type II secretion system (T2SS), protein K
RG54_RS10625	PF11612	Type II secretion system (T2SS), protein J
RG54_RS10625	PF13633	Prokaryotic N-terminal methylation site
RG54_RS10630	PF02501	Type II secretion system (T2SS), protein I
RG54_RS10630	PF13633	Prokaryotic N-terminal methylation site
RG54_RS10635	PF07963	Prokaryotic N-terminal methylation motif
RG54_RS10635	PF12019	Type II transport protein GspH
RG54_RS10640	PF08334	Type II secretion system (T2SS), protein G
RG54_RS10640	PF13544	RG54_RS10640
RG54_RS10645	PF00482	Type II secretion system (T2SS), protein F
RG54_RS10650	PF00437	Type II/IV secretion system protein
RG54_RS10655	PF00263	RG54_RS10655
RG54_RS10655	PF03958	Bacterial type II/III secretion system short domain
RG54_RS10660	PF11356	Type IV pilus biogenesis
RG54_RS10665	PF16549	RG54_RS10665
RG54_RS10670	PF01478	Type IV leader peptidase family
RG54_RS10670	PF06750	RG54_RS10670
RG54_RS10675	PF13322	RG54_RS10675
RG54_RS10675	PF13402	Peptidase M60-like family
RG54_RS10690	PF02652	RG54_RS10690
RG54_RS10695	PF01274	Malate synthase
RG54_RS10700	PF03928	Domain of unknown function (DUF336)
RG54_RS10705	PF02754	RG54_RS10705
RG54_RS10705	PF13183	4Fe-4S dicluster domain
RG54_RS10710	PF01565	FAD binding domain
RG54_RS10715	PF01565	FAD binding domain
RG54_RS10715	PF02913	FAD linked oxidases, C-terminal domain
RG54_RS10720	PF00392	Bacterial regulatory proteins, gntR family
RG54_RS10720	PF07729	FCD domain
RG54_RS10735	PF00501	AMP-binding enzyme
RG54_RS10740	PF01370	NAD dependent epimerase/dehydratase family
RG54_RS10745	PF00550	Phosphopantetheine attachment site
RG54_RS10750	PF00155	Aminotransferase class I and II
RG54_RS10755	PF03739	RG54_RS10755
RG54_RS10760	PF03739	RG54_RS10760
RG54_RS10765	PF09695	RG54_RS10765
RG54_RS10775	PF01943	RG54_RS10775
RG54_RS10795	PF01384	RG54_RS10795
RG54_RS10800	PF03738	Glutathionylspermidine synthase preATP-grasp
RG54_RS10800	PF05257	CHAP domain
RG54_RS10805	PF02798	Glutathione S-transferase, N-terminal domain
RG54_RS10805	PF13410	Glutathione S-transferase, C-terminal domain
RG54_RS10810	PF01455	HupF/HypC family
RG54_RS10815	PF01155	Hydrogenase expression/synthesis hypA family
RG54_RS10820	PF11939	Protein of unknown function (DUF3457)
RG54_RS10825	PF01750	Hydrogenase maturation protease
RG54_RS10830	PF00374	Nickel-dependent hydrogenase
RG54_RS10835	PF03916	RG54_RS10835
RG54_RS10840	PF13247	4Fe-4S dicluster domain
RG54_RS10845	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
RG54_RS10845	PF14720	NiFe/NiFeSe hydrogenase small subunit C-terminal
RG54_RS10855	PF11115	RG54_RS10855
RG54_RS10860	PF01738	Dienelactone hydrolase family
RG54_RS10865	PF00248	Aldo/keto reductase family
RG54_RS10870	PF03350	RG54_RS10870
RG54_RS10875	PF13561	Enoyl-(Acyl carrier protein) reductase
RG54_RS10880	PF02472	Biopolymer transport protein ExbD/TolR
RG54_RS10885	PF01618	RG54_RS10885
RG54_RS10895	PF01053	Cys/Met metabolism PLP-dependent enzyme
RG54_RS10900	PF09335	RG54_RS10900
RG54_RS10905	PF06719	RG54_RS10905
RG54_RS10905	PF12833	Helix-turn-helix domain
RG54_RS10915	PF00465	Iron-containing alcohol dehydrogenase
RG54_RS10920	PF00248	Aldo/keto reductase family
RG54_RS10925	PF12883	Protein of unknown function (DUF3828)
RG54_RS10930	PF04728	Lipoprotein leucine-zipper
RG54_RS10935	PF04055	Radical SAM superfamily
RG54_RS10935	PF08497	RG54_RS10935
RG54_RS10935	PF11842	RG54_RS10935
RG54_RS10940	PF00394	Multicopper oxidase
RG54_RS10940	PF07731	Multicopper oxidase
RG54_RS10940	PF07732	Multicopper oxidase
RG54_RS10945	PF01553	Acyltransferase
RG54_RS10955	PF00521	DNA gyrase/topoisomerase IV, subunit A
RG54_RS10955	PF03989	DNA gyrase C-terminal domain, beta-propeller
RG54_RS10965	PF06445	GyrI-like small molecule binding domain
RG54_RS10970	PF04076	Bacterial OB fold (BOF) protein
RG54_RS10975	PF00072	Response regulator receiver domain
RG54_RS10975	PF00486	Transcriptional regulatory protein, C terminal
RG54_RS10980	PF00512	His Kinase A (phospho-acceptor) domain
RG54_RS10980	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS10980	PF08521	RG54_RS10980
RG54_RS10985	PF10840	RG54_RS10985
RG54_RS10990	PF02525	Flavodoxin-like fold
RG54_RS10995	PF03992	Antibiotic biosynthesis monooxygenase
RG54_RS11000	PF00204	DNA gyrase B
RG54_RS11000	PF00986	DNA gyrase B subunit, carboxyl terminus
RG54_RS11000	PF01751	Toprim domain
RG54_RS11000	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS11005	PF05728	Uncharacterised protein family (UPF0227)
RG54_RS11010	PF00149	Calcineurin-like phosphoesterase
RG54_RS11015	PF06853	RG54_RS11015
RG54_RS11020	PF00293	NUDIX domain
RG54_RS11025	PF02321	Outer membrane efflux protein
RG54_RS11035	PF06693	RG54_RS11035
RG54_RS11040	PF03738	Glutathionylspermidine synthase preATP-grasp
RG54_RS11045	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
RG54_RS11050	PF02535	RG54_RS11050
RG54_RS11055	PF13260	RG54_RS11055
RG54_RS11060	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
RG54_RS11065	PF04380	RG54_RS11065
RG54_RS11070	PF00419	Fimbrial protein
RG54_RS11075	PF00577	Outer membrane usher protein
RG54_RS11075	PF13953	PapC C-terminal domain
RG54_RS11075	PF13954	PapC N-terminal domain
RG54_RS11080	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
RG54_RS11080	PF02753	Pili assembly chaperone PapD, C-terminal domain
RG54_RS11085	PF00419	Fimbrial protein
RG54_RS11090	PF08971	Glycogen synthesis protein
RG54_RS11095	PF07290	RG54_RS11095
RG54_RS11100	PF01145	SPFH domain / Band 7 family
RG54_RS11100	PF15975	RG54_RS11100
RG54_RS11110	PF13956	RG54_RS11110
RG54_RS11115	PF00294	pfkB family carbohydrate kinase
RG54_RS11115	PF01467	Cytidylyltransferase
RG54_RS11120	PF03710	Glutamate-ammonia ligase adenylyltransferase
RG54_RS11120	PF08335	GlnD PII-uridylyltransferase
RG54_RS11125	PF01928	CYTH domain
RG54_RS11135	PF08239	Bacterial SH3 domain
RG54_RS11140	PF01743	Poly A polymerase head domain
RG54_RS11140	PF01966	HD domain
RG54_RS11140	PF12627	Probable RNA and SrmB- binding site of polymerase A
RG54_RS11145	PF02673	RG54_RS11145
RG54_RS11150	PF02152	Dihydroneopterin aldolase
RG54_RS11155	PF02660	RG54_RS11155
RG54_RS11160	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS11160	PF03466	LysR substrate binding domain
RG54_RS11170	PF05681	RG54_RS11170
RG54_RS11175	PF05683	Fumarase C-terminus
RG54_RS11180	PF00939	Sodium:sulfate symporter transmembrane region
RG54_RS11185	PF00814	Glycoprotease family
RG54_RS11190	PF01165	Ribosomal protein S21
RG54_RS11195	PF01807	CHC2 zinc finger
RG54_RS11195	PF08275	DNA primase catalytic core, N-terminal domain
RG54_RS11195	PF08278	DNA primase DnaG DnaB-binding
RG54_RS11195	PF10410	DnaB-helicase binding domain of primase
RG54_RS11195	PF13155	Toprim-like
RG54_RS11205	PF00140	Sigma-70 factor, region 1
RG54_RS11205	PF03979	Sigma-70 factor, region 1
RG54_RS11205	PF04539	Sigma-70 region 3
RG54_RS11205	PF04542	Sigma-70 region 2
RG54_RS11205	PF04545	Sigma-70, region 4
RG54_RS11205	PF04546	Sigma-70, non-essential region
RG54_RS11210	PF03167	Uracil DNA glycosylase superfamily
RG54_RS11220	PF04954	Siderophore-interacting protein
RG54_RS11220	PF08021	Siderophore-interacting FAD-binding domain
RG54_RS11225	PF03551	Transcriptional regulator PadR-like family
RG54_RS11230	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RG54_RS11230	PF00672	HAMP domain
RG54_RS11230	PF08447	PAS fold
RG54_RS11240	PF00202	Aminotransferase class-III
RG54_RS11245	PF01588	Putative tRNA binding domain
RG54_RS11255	PF00356	Bacterial regulatory proteins, lacI family
RG54_RS11255	PF13377	Periplasmic binding protein-like domain
RG54_RS11260	PF00703	Glycosyl hydrolases family 2
RG54_RS11260	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
RG54_RS11260	PF02837	Glycosyl hydrolases family 2, sugar binding domain
RG54_RS11260	PF02929	Beta galactosidase small chain
RG54_RS11260	PF16353	RG54_RS11260
RG54_RS11265	PF04074	Domain of unknown function (DUF386)
RG54_RS11270	PF13520	Amino acid permease
RG54_RS11280	PF01204	Trehalase
RG54_RS11285	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
RG54_RS11285	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RG54_RS11290	PF01381	Helix-turn-helix
RG54_RS11300	PF05175	Methyltransferase small domain
RG54_RS11305	PF01863	Protein of unknown function DUF45
RG54_RS11310	PF02698	DUF218 domain
RG54_RS11315	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
RG54_RS11320	PF03741	RG54_RS11320
RG54_RS11325	PF00375	Sodium:dicarboxylate symporter family
RG54_RS11330	PF10688	RG54_RS11330
RG54_RS11335	PF04295	RG54_RS11335
RG54_RS11335	PF08666	SAF domain
RG54_RS11340	PF02614	Glucuronate isomerase
RG54_RS11345	PF07690	Major Facilitator Superfamily
RG54_RS11350	PF07434	CblD like pilus biogenesis initiator
RG54_RS11355	PF15976	RG54_RS11355
RG54_RS11355	PF16967	RG54_RS11355
RG54_RS11360	PF04449	CS1 type fimbrial major subunit
RG54_RS11365	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
RG54_RS11370	PF00392	Bacterial regulatory proteins, gntR family
RG54_RS11370	PF07729	FCD domain
RG54_RS11375	PF09335	RG54_RS11375
RG54_RS11380	PF13721	SecD export protein N-terminal TM region
RG54_RS11385	PF06476	RG54_RS11385
RG54_RS11390	PF05957	RG54_RS11390
RG54_RS11395	PF07332	RG54_RS11395
RG54_RS11400	PF13997	RG54_RS11400
RG54_RS11405	PF07681	RG54_RS11405
RG54_RS11410	PF13409	Glutathione S-transferase, N-terminal domain
RG54_RS11410	PF13410	Glutathione S-transferase, C-terminal domain
RG54_RS11415	PF05656	RG54_RS11415
RG54_RS11420	PF05656	RG54_RS11420
RG54_RS11430	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS11430	PF03466	LysR substrate binding domain
RG54_RS11435	PF02678	Pirin
RG54_RS11445	PF03313	RG54_RS11445
RG54_RS11455	PF03313	RG54_RS11455
RG54_RS11455	PF03315	Serine dehydratase beta chain
RG54_RS11460	PF01042	Endoribonuclease L-PSP
RG54_RS11465	PF01228	Glycine radical
RG54_RS11465	PF02901	Pyruvate formate lyase
RG54_RS11470	PF00871	Acetokinase family
RG54_RS11475	PF03222	Tryptophan/tyrosine permease family
RG54_RS11480	PF00291	Pyridoxal-phosphate dependent enzyme
RG54_RS11485	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS11485	PF03466	LysR substrate binding domain
RG54_RS11510	PF02595	Glycerate kinase family
RG54_RS11515	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
RG54_RS11515	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
RG54_RS11520	PF03328	HpcH/HpaI aldolase/citrate lyase family
RG54_RS11525	PF07690	Major Facilitator Superfamily
RG54_RS11530	PF04295	RG54_RS11530
RG54_RS11530	PF08666	SAF domain
RG54_RS11535	PF15937	RG54_RS11535
RG54_RS11540	PF11663	RG54_RS11540
RG54_RS11545	PF00455	RG54_RS11545
RG54_RS11545	PF08220	DeoR-like helix-turn-helix domain
RG54_RS11555	PF08013	Tagatose 6 phosphate kinase
RG54_RS11560	PF03830	PTS system sorbose subfamily IIB component
RG54_RS11565	PF03609	RG54_RS11565
RG54_RS11570	PF03613	RG54_RS11570
RG54_RS11575	PF03610	PTS system fructose IIA component
RG54_RS11580	PF01979	Amidohydrolase family
RG54_RS11585	PF01380	SIS domain
RG54_RS11590	PF01116	Fructose-bisphosphate aldolase class-II
RG54_RS11595	PF03830	PTS system sorbose subfamily IIB component
RG54_RS11605	PF03613	RG54_RS11605
RG54_RS11610	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
RG54_RS11615	PF00419	Fimbrial protein
RG54_RS11620	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
RG54_RS11620	PF02753	Pili assembly chaperone PapD, C-terminal domain
RG54_RS11625	PF00577	Outer membrane usher protein
RG54_RS11625	PF13953	PapC C-terminal domain
RG54_RS11625	PF13954	PapC N-terminal domain
RG54_RS11630	PF00419	Fimbrial protein
RG54_RS11635	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
RG54_RS11640	PF04348	LppC putative lipoprotein
RG54_RS11645	PF02021	Uncharacterised protein family UPF0102
RG54_RS11650	PF13580	SIS domain
RG54_RS11655	PF04972	BON domain
RG54_RS11660	PF03773	RG54_RS11660
RG54_RS11665	PF13460	NADH(P)-binding
RG54_RS11670	PF01965	DJ-1/PfpI family
RG54_RS11680	PF01541	GIY-YIG catalytic domain
RG54_RS11685	PF13508	Acetyltransferase (GNAT) domain
RG54_RS11690	PF02036	SCP-2 sterol transfer family
RG54_RS11695	PF01136	RG54_RS11695
RG54_RS11700	PF01136	RG54_RS11700
RG54_RS11705	PF00296	Luciferase-like monooxygenase
RG54_RS11710	PF03222	Tryptophan/tyrosine permease family
RG54_RS11720	PF00270	DEAD/DEAH box helicase
RG54_RS11720	PF00271	Helicase conserved C-terminal domain
RG54_RS11720	PF03880	DbpA RNA binding domain
RG54_RS11720	PF12343	RG54_RS11720
RG54_RS11730	PF07719	Tetratricopeptide repeat
RG54_RS11730	PF13181	Tetratricopeptide repeat
RG54_RS11735	PF00013	KH domain
RG54_RS11735	PF00575	S1 RNA binding domain
RG54_RS11735	PF01138	3' exoribonuclease family, domain 1
RG54_RS11735	PF03725	3' exoribonuclease family, domain 2
RG54_RS11735	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
RG54_RS11740	PF00312	Ribosomal protein S15
RG54_RS11745	PF01509	TruB family pseudouridylate synthase (N terminal domain)
RG54_RS11745	PF09157	Pseudouridine synthase II TruB, C-terminal
RG54_RS11745	PF16198	RG54_RS11745
RG54_RS11750	PF02033	Ribosome-binding factor A
RG54_RS11755	PF00009	Elongation factor Tu GTP binding domain
RG54_RS11755	PF04760	Translation initiation factor IF-2, N-terminal region
RG54_RS11755	PF08364	RG54_RS11755
RG54_RS11755	PF11987	Translation-initiation factor 2
RG54_RS11760	PF00575	S1 RNA binding domain
RG54_RS11760	PF08529	NusA N-terminal domain
RG54_RS11760	PF13184	NusA-like KH domain
RG54_RS11760	PF14520	Helix-hairpin-helix domain
RG54_RS11765	PF02576	Uncharacterised BCR, YhbC family COG0779
RG54_RS11775	PF00764	Arginosuccinate synthase
RG54_RS11780	PF00884	Sulfatase
RG54_RS11795	PF03840	Preprotein translocase SecG subunit
RG54_RS11800	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
RG54_RS11800	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
RG54_RS11800	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
RG54_RS11800	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
RG54_RS11805	PF00809	Pterin binding enzyme
RG54_RS11810	PF00004	ATPase family associated with various cellular activities (AAA)
RG54_RS11810	PF01434	Peptidase family M41
RG54_RS11810	PF06480	FtsH Extracellular
RG54_RS11815	PF01728	FtsJ-like methyltransferase
RG54_RS11820	PF01985	CRS1 / YhbY (CRM) domain
RG54_RS11825	PF01272	Transcription elongation factor, GreA/GreB, C-term
RG54_RS11825	PF03449	Transcription elongation factor, N-terminal
RG54_RS11830	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
RG54_RS11835	PF01018	GTP1/OBG
RG54_RS11835	PF01926	50S ribosome-binding GTPase
RG54_RS11840	PF00892	EamA-like transporter family
RG54_RS11845	PF01016	Ribosomal L27 protein
RG54_RS11850	PF00829	Ribosomal prokaryotic L21 protein
RG54_RS11855	PF00348	Polyprenyl synthetase
RG54_RS11860	PF13693	Winged helix-turn-helix DNA-binding
RG54_RS11865	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
RG54_RS11870	PF01722	BolA-like protein
RG54_RS11875	PF13466	STAS domain
RG54_RS11880	PF05494	Toluene tolerance, Ttg2
RG54_RS11885	PF02470	RG54_RS11885
RG54_RS11890	PF02405	RG54_RS11890
RG54_RS11895	PF00005	ABC transporter
RG54_RS11900	PF01699	Sodium/calcium exchanger protein
RG54_RS11905	PF00571	CBS domain
RG54_RS11905	PF01380	SIS domain
RG54_RS11910	PF08282	haloacid dehalogenase-like hydrolase
RG54_RS11915	PF06835	Lipopolysaccharide-assembly, LptC-related
RG54_RS11920	PF03968	OstA-like protein
RG54_RS11925	PF00005	ABC transporter
RG54_RS11925	PF12399	Branched-chain amino acid ATP-binding cassette transporter
RG54_RS11930	PF00309	RG54_RS11930
RG54_RS11930	PF04552	Sigma-54, DNA binding domain
RG54_RS11930	PF04963	Sigma-54 factor, core binding domain
RG54_RS11935	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
RG54_RS11940	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
RG54_RS11945	PF03668	RG54_RS11945
RG54_RS11950	PF00381	PTS HPr component phosphorylation site
RG54_RS11955	PF10707	RG54_RS11955
RG54_RS11960	PF00912	Transglycosylase
RG54_RS11970	PF00072	Response regulator receiver domain
RG54_RS11970	PF00512	His Kinase A (phospho-acceptor) domain
RG54_RS11970	PF00989	PAS fold
RG54_RS11970	PF01627	Hpt domain
RG54_RS11970	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS11975	PF04055	Radical SAM superfamily
RG54_RS11975	PF16199	RG54_RS11975
RG54_RS11985	PF00310	Glutamine amidotransferases class-II
RG54_RS11985	PF01493	GXGXG motif
RG54_RS11985	PF01645	Conserved region in glutamate synthase
RG54_RS11985	PF04898	Glutamate synthase central domain
RG54_RS11990	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RG54_RS11990	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
RG54_RS11995	PF06250	RG54_RS11995
RG54_RS12000	PF04074	Domain of unknown function (DUF386)
RG54_RS12005	PF00480	ROK family
RG54_RS12010	PF04131	Putative N-acetylmannosamine-6-phosphate epimerase
RG54_RS12015	PF07690	Major Facilitator Superfamily
RG54_RS12020	PF00701	Dihydrodipicolinate synthetase family
RG54_RS12025	PF00392	Bacterial regulatory proteins, gntR family
RG54_RS12025	PF07729	FCD domain
RG54_RS12035	PF03606	RG54_RS12035
RG54_RS12040	PF04386	Stringent starvation protein B
RG54_RS12045	PF00043	Glutathione S-transferase, C-terminal domain
RG54_RS12045	PF02798	Glutathione S-transferase, N-terminal domain
RG54_RS12050	PF00380	Ribosomal protein S9/S16
RG54_RS12055	PF00572	Ribosomal protein L13
RG54_RS12060	PF03969	AFG1-like ATPase
RG54_RS12065	PF06295	RG54_RS12065
RG54_RS12070	PF00595	PDZ domain (Also known as DHR or GLGF)
RG54_RS12070	PF13180	PDZ domain
RG54_RS12070	PF13365	Trypsin-like peptidase domain
RG54_RS12075	PF13180	PDZ domain
RG54_RS12075	PF13365	Trypsin-like peptidase domain
RG54_RS12080	PF00056	lactate/malate dehydrogenase, NAD binding domain
RG54_RS12080	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
RG54_RS12085	PF01316	Arginine repressor, DNA binding domain
RG54_RS12085	PF02863	Arginine repressor, C-terminal domain
RG54_RS12090	PF07338	Protein of unknown function (DUF1471)
RG54_RS12095	PF01337	Barstar (barnase inhibitor)
RG54_RS12100	PF04632	RG54_RS12100
RG54_RS12105	PF13437	HlyD family secretion protein
RG54_RS12105	PF13533	Biotin-lipoyl like
RG54_RS12110	PF07869	RG54_RS12110
RG54_RS12115	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS12115	PF03466	LysR substrate binding domain
RG54_RS12120	PF01523	Putative modulator of DNA gyrase
RG54_RS12125	PF13116	RG54_RS12125
RG54_RS12125	PF13502	RG54_RS12125
RG54_RS12130	PF00575	S1 RNA binding domain
RG54_RS12130	PF10150	Ribonuclease E/G family
RG54_RS12135	PF02545	Maf-like protein
RG54_RS12140	PF04093	RG54_RS12140
RG54_RS12145	PF04085	rod shape-determining protein MreC
RG54_RS12150	PF06723	MreB/Mbl protein
RG54_RS12165	PF00563	EAL domain
RG54_RS12165	PF00990	GGDEF domain
RG54_RS12165	PF17157	RG54_RS12165
RG54_RS12170	PF00107	Zinc-binding dehydrogenase
RG54_RS12170	PF08240	Alcohol dehydrogenase GroES-like domain
RG54_RS12185	PF00364	Biotin-requiring enzyme
RG54_RS12190	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
RG54_RS12190	PF02785	Biotin carboxylase C-terminal domain
RG54_RS12190	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
RG54_RS12195	PF06196	RG54_RS12195
RG54_RS12200	PF00474	Sodium:solute symporter family
RG54_RS12205	PF06325	Ribosomal protein L11 methyltransferase (PrmA)
RG54_RS12210	PF01207	Dihydrouridine synthase (Dus)
RG54_RS12215	PF02954	Bacterial regulatory protein, Fis family
RG54_RS12220	PF01555	DNA methylase
RG54_RS12225	PF10831	RG54_RS12225
RG54_RS12230	PF00440	Bacterial regulatory proteins, tetR family
RG54_RS12230	PF08361	MAATS-type transcriptional repressor, C-terminal region
RG54_RS12240	PF00529	HlyD family secretion protein
RG54_RS12240	PF16576	RG54_RS12240
RG54_RS12245	PF00873	AcrB/AcrD/AcrF family
RG54_RS12255	PF00497	Bacterial extracellular solute-binding proteins, family 3
RG54_RS12260	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS12265	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS12270	PF00005	ABC transporter
RG54_RS12310	PF00132	Bacterial transferase hexapeptide (six repeats)
RG54_RS12315	PF07369	Protein of unknown function (DUF1488)
RG54_RS12320	PF01488	Shikimate / quinate 5-dehydrogenase
RG54_RS12320	PF08501	Shikimate dehydrogenase substrate binding domain
RG54_RS12325	PF01300	Telomere recombination
RG54_RS12330	PF01396	RG54_RS12330
RG54_RS12335	PF04361	RG54_RS12335
RG54_RS12340	PF02481	DNA recombination-mediator protein A
RG54_RS12345	PF01327	Polypeptide deformylase
RG54_RS12350	PF00551	Formyl transferase
RG54_RS12350	PF02911	Formyl transferase, C-terminal domain
RG54_RS12355	PF01029	NusB family
RG54_RS12355	PF01189	NOL1/NOP2/sun family
RG54_RS12360	PF02080	TrkA-C domain
RG54_RS12360	PF02254	TrkA-N domain
RG54_RS12365	PF01741	Large-conductance mechanosensitive channel, MscL
RG54_RS12370	PF03889	RG54_RS12370
RG54_RS12375	PF13411	MerR HTH family regulatory protein
RG54_RS12380	PF09350	RG54_RS12380
RG54_RS12385	PF01196	Ribosomal protein L17
RG54_RS12390	PF01000	RNA polymerase Rpb3/RpoA insert domain
RG54_RS12390	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
RG54_RS12390	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
RG54_RS12395	PF00163	Ribosomal protein S4/S9 N-terminal domain
RG54_RS12395	PF01479	S4 domain
RG54_RS12400	PF00411	Ribosomal protein S11
RG54_RS12405	PF00416	Ribosomal protein S13/S18
RG54_RS12410	PF00444	Ribosomal protein L36
RG54_RS12415	PF00344	SecY translocase
RG54_RS12420	PF00828	Ribosomal protein L18e/L15
RG54_RS12425	PF00327	Ribosomal protein L30p/L7e
RG54_RS12430	PF00333	Ribosomal protein S5, N-terminal domain
RG54_RS12430	PF03719	Ribosomal protein S5, C-terminal domain
RG54_RS12435	PF00861	Ribosomal L18p/L5e family
RG54_RS12440	PF00347	Ribosomal protein L6
RG54_RS12445	PF00410	Ribosomal protein S8
RG54_RS12450	PF00253	Ribosomal protein S14p/S29e
RG54_RS12455	PF00281	Ribosomal protein L5
RG54_RS12455	PF00673	ribosomal L5P family C-terminus
RG54_RS12460	PF00467	KOW motif
RG54_RS12460	PF17136	RG54_RS12460
RG54_RS12465	PF00238	Ribosomal protein L14p/L23e
RG54_RS12470	PF00366	Ribosomal protein S17
RG54_RS12475	PF00831	Ribosomal L29 protein
RG54_RS12480	PF00252	Ribosomal protein L16p/L10e
RG54_RS12485	PF00189	Ribosomal protein S3, C-terminal domain
RG54_RS12485	PF07650	KH domain
RG54_RS12490	PF00237	Ribosomal protein L22p/L17e
RG54_RS12495	PF00203	Ribosomal protein S19
RG54_RS12500	PF00181	Ribosomal Proteins L2, RNA binding domain
RG54_RS12500	PF03947	Ribosomal Proteins L2, C-terminal domain
RG54_RS12505	PF00276	Ribosomal protein L23
RG54_RS12510	PF00573	Ribosomal protein L4/L1 family
RG54_RS12515	PF00297	Ribosomal protein L3
RG54_RS12520	PF00338	Ribosomal protein S10p/S20e
RG54_RS12530	PF01478	Type IV leader peptidase family
RG54_RS12535	PF00210	Ferritin-like domain
RG54_RS12540	PF04324	BFD-like [2Fe-2S] binding domain
RG54_RS12550	PF00009	Elongation factor Tu GTP binding domain
RG54_RS12550	PF03143	Elongation factor Tu C-terminal domain
RG54_RS12550	PF03144	Elongation factor Tu domain 2
RG54_RS12555	PF00009	Elongation factor Tu GTP binding domain
RG54_RS12555	PF00679	Elongation factor G C-terminus
RG54_RS12555	PF03144	Elongation factor Tu domain 2
RG54_RS12555	PF03764	Elongation factor G, domain IV
RG54_RS12555	PF14492	Elongation Factor G, domain II
RG54_RS12560	PF00177	Ribosomal protein S7p/S5e
RG54_RS12565	PF00164	Ribosomal protein S12/S23
RG54_RS12570	PF04077	DsrH like protein
RG54_RS12575	PF02635	DsrE/DsrF-like family
RG54_RS12580	PF02635	DsrE/DsrF-like family
RG54_RS12585	PF08348	RG54_RS12585
RG54_RS12585	PF13309	RG54_RS12585
RG54_RS12590	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
RG54_RS12590	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
RG54_RS12595	PF04102	SlyX
RG54_RS12600	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
RG54_RS12605	PF09526	RG54_RS12605
RG54_RS12610	PF00999	Sodium/hydrogen exchanger family
RG54_RS12610	PF02254	TrkA-N domain
RG54_RS12615	PF02525	Flavodoxin-like fold
RG54_RS12625	PF00005	ABC transporter
RG54_RS12625	PF12848	ABC transporter
RG54_RS12630	PF00561	alpha/beta hydrolase fold
RG54_RS12635	PF06794	Uncharacterised protein family (UPF0270)
RG54_RS12640	PF00485	Phosphoribulokinase / Uridine kinase family
RG54_RS12645	PF02566	OsmC-like protein
RG54_RS12655	PF00027	Cyclic nucleotide-binding domain
RG54_RS12655	PF00325	Bacterial regulatory proteins, crp family
RG54_RS12660	PF12805	RG54_RS12660
RG54_RS12660	PF13515	RG54_RS12660
RG54_RS12665	PF00202	Aminotransferase class-III
RG54_RS12670	PF00117	Glutamine amidotransferase class-I
RG54_RS12675	PF02661	Fic/DOC family
RG54_RS12680	PF10832	RG54_RS12680
RG54_RS12685	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
RG54_RS12690	PF07690	Major Facilitator Superfamily
RG54_RS12695	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
RG54_RS12695	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
RG54_RS12695	PF04324	BFD-like [2Fe-2S] binding domain
RG54_RS12695	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RG54_RS12700	PF13806	Rieske-like [2Fe-2S] domain
RG54_RS12705	PF01226	Formate/nitrite transporter
RG54_RS12710	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
RG54_RS12710	PF10414	Sirohaem synthase dimerisation region
RG54_RS12710	PF13241	Putative NAD(P)-binding
RG54_RS12710	PF14824	Sirohaem biosynthesis protein central
RG54_RS12715	PF13978	RG54_RS12715
RG54_RS12720	PF00155	Aminotransferase class I and II
RG54_RS12725	PF10797	RG54_RS12725
RG54_RS12730	PF10941	RG54_RS12730
RG54_RS12735	PF02126	Phosphotriesterase family
RG54_RS12740	PF01676	Metalloenzyme superfamily
RG54_RS12745	PF01168	Alanine racemase, N-terminal domain
RG54_RS12755	PF14502	Helix-turn-helix domain
RG54_RS12755	PF14503	YhfZ C-terminal domain
RG54_RS12760	PF00579	tRNA synthetases class I (W and Y)
RG54_RS12765	PF13419	Haloacid dehalogenase-like hydrolase
RG54_RS12770	PF00834	Ribulose-phosphate 3 epimerase family
RG54_RS12775	PF02086	D12 class N6 adenine-specific DNA methyltransferase
RG54_RS12780	PF05036	Sporulation related domain
RG54_RS12785	PF01761	3-dehydroquinate synthase
RG54_RS12790	PF01202	Shikimate kinase
RG54_RS12800	PF00263	RG54_RS12800
RG54_RS12800	PF03958	Bacterial type II/III secretion system short domain
RG54_RS12805	PF10748	RG54_RS12805
RG54_RS12815	PF05137	RG54_RS12815
RG54_RS12825	PF00905	Penicillin binding protein transpeptidase domain
RG54_RS12825	PF00912	Transglycosylase
RG54_RS12825	PF17092	RG54_RS12825
RG54_RS12830	PF00293	NUDIX domain
RG54_RS12835	PF07095	Intracellular growth attenuator protein IgaA
RG54_RS12840	PF13419	Haloacid dehalogenase-like hydrolase
RG54_RS12845	PF01479	S4 domain
RG54_RS12850	PF01430	Hsp33 protein
RG54_RS12855	PF13687	RG54_RS12855
RG54_RS12865	PF01293	Phosphoenolpyruvate carboxykinase
RG54_RS12870	PF06296	RG54_RS12870
RG54_RS12875	PF13560	Helix-turn-helix domain
RG54_RS12880	PF00512	His Kinase A (phospho-acceptor) domain
RG54_RS12880	PF00672	HAMP domain
RG54_RS12880	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS12885	PF00072	Response regulator receiver domain
RG54_RS12885	PF00486	Transcriptional regulatory protein, C terminal
RG54_RS12895	PF01272	Transcription elongation factor, GreA/GreB, C-term
RG54_RS12895	PF03449	Transcription elongation factor, N-terminal
RG54_RS12900	PF00575	S1 RNA binding domain
RG54_RS12900	PF09371	Tex-like protein N-terminal domain
RG54_RS12900	PF12836	Helix-hairpin-helix motif
RG54_RS12900	PF16921	RG54_RS12900
RG54_RS12910	PF04023	FeoA domain
RG54_RS12915	PF02421	Ferrous iron transport protein B
RG54_RS12915	PF07664	RG54_RS12915
RG54_RS12915	PF07670	Nucleoside recognition
RG54_RS12920	PF09012	FeoC like transcriptional regulator
RG54_RS12930	PF04754	RG54_RS12930
RG54_RS12935	PF00561	alpha/beta hydrolase fold
RG54_RS12940	PF00156	Phosphoribosyl transferase domain
RG54_RS12945	PF01106	NifU-like domain
RG54_RS12945	PF01521	Iron-sulphur cluster biosynthesis
RG54_RS12950	PF02447	RG54_RS12950
RG54_RS12955	PF02446	4-alpha-glucanotransferase
RG54_RS12960	PF00343	Carbohydrate phosphorylase
RG54_RS12965	PF00196	Bacterial regulatory proteins, luxR family
RG54_RS12970	PF01137	RNA 3'-terminal phosphate cyclase
RG54_RS12970	PF05189	RNA 3'-terminal phosphate cyclase (RTC), insert domain
RG54_RS12975	PF01139	tRNA-splicing ligase RtcB
RG54_RS12980	PF00158	Sigma-54 interaction domain
RG54_RS12980	PF06956	RG54_RS12980
RG54_RS12985	PF00455	RG54_RS12985
RG54_RS12985	PF08220	DeoR-like helix-turn-helix domain
RG54_RS12990	PF01694	Rhomboid family
RG54_RS12990	PF12122	Protein of unknown function (DUF3582)
RG54_RS12995	PF00581	Rhodanese-like domain
RG54_RS13000	PF01266	FAD dependent oxidoreductase
RG54_RS13000	PF16901	RG54_RS13000
RG54_RS13020	PF12849	PBP superfamily domain
RG54_RS13025	PF00343	Carbohydrate phosphorylase
RG54_RS13030	PF00534	Glycosyl transferases group 1
RG54_RS13030	PF08323	Starch synthase catalytic domain
RG54_RS13035	PF00483	Nucleotidyl transferase
RG54_RS13040	PF00128	Alpha amylase, catalytic domain
RG54_RS13040	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
RG54_RS13045	PF00128	Alpha amylase, catalytic domain
RG54_RS13045	PF02806	Alpha amylase, C-terminal all-beta domain
RG54_RS13045	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
RG54_RS13050	PF01118	Semialdehyde dehydrogenase, NAD binding domain
RG54_RS13050	PF02774	Semialdehyde dehydrogenase, dimerisation domain
RG54_RS13055	PF01914	RG54_RS13055
RG54_RS13060	PF02447	RG54_RS13060
RG54_RS13065	PF01202	Shikimate kinase
RG54_RS13070	PF00356	Bacterial regulatory proteins, lacI family
RG54_RS13070	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
RG54_RS13075	PF02678	Pirin
RG54_RS13080	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
RG54_RS13080	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
RG54_RS13085	PF00583	Acetyltransferase (GNAT) family
RG54_RS13090	PF05638	Protein of unknown function (DUF796)
RG54_RS13090	PF12639	DNase/tRNase domain of colicin-like bacteriocin
RG54_RS13105	PF15567	RG54_RS13105
RG54_RS13110	PF01019	Gamma-glutamyltranspeptidase
RG54_RS13115	PF10956	RG54_RS13115
RG54_RS13120	PF03009	Glycerophosphoryl diester phosphodiesterase family
RG54_RS13125	PF00005	ABC transporter
RG54_RS13125	PF08402	TOBE domain
RG54_RS13130	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS13135	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS13140	PF13416	Bacterial extracellular solute-binding protein
RG54_RS13145	PF15954	RG54_RS13145
RG54_RS13150	PF00005	ABC transporter
RG54_RS13155	PF00005	ABC transporter
RG54_RS13155	PF12399	Branched-chain amino acid ATP-binding cassette transporter
RG54_RS13160	PF02653	RG54_RS13160
RG54_RS13160	PF11862	RG54_RS13160
RG54_RS13165	PF02653	RG54_RS13165
RG54_RS13170	PF13458	Periplasmic binding protein
RG54_RS13175	PF15945	RG54_RS13175
RG54_RS13180	PF12568	Acetyltransferase (GNAT) domain
RG54_RS13185	PF13458	Periplasmic binding protein
RG54_RS13190	PF04542	Sigma-70 region 2
RG54_RS13190	PF04545	Sigma-70, region 4
RG54_RS13195	PF02687	RG54_RS13195
RG54_RS13200	PF00005	ABC transporter
RG54_RS13205	PF00448	SRP54-type protein, GTPase domain
RG54_RS13205	PF02881	SRP54-type protein, helical bundle domain
RG54_RS13210	PF03602	Conserved hypothetical protein 95
RG54_RS13215	PF06611	RG54_RS13215
RG54_RS13220	PF10694	Protein of unknown function (DUF2500)
RG54_RS13225	PF07947	RG54_RS13225
RG54_RS13230	PF00122	E1-E2 ATPase
RG54_RS13230	PF00403	Heavy-metal-associated domain
RG54_RS13230	PF00702	haloacid dehalogenase-like hydrolase
RG54_RS13235	PF01206	Sulfurtransferase TusA
RG54_RS13240	PF02592	RG54_RS13240
RG54_RS13245	PF08786	Domain of unknown function (DUF1795)
RG54_RS13250	PF07690	Major Facilitator Superfamily
RG54_RS13255	PF01594	RG54_RS13255
RG54_RS13260	PF01648	4'-phosphopantetheinyl transferase superfamily
RG54_RS13265	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RG54_RS13270	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS13275	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS13280	PF00005	ABC transporter
RG54_RS13285	PF00005	ABC transporter
RG54_RS13290	PF01402	Ribbon-helix-helix protein, copG family
RG54_RS13290	PF08753	NikR C terminal nickel binding domain
RG54_RS13295	PF05534	RG54_RS13295
RG54_RS13300	PF07927	YcfA-like protein
RG54_RS13305	PF12698	ABC-2 family transporter protein
RG54_RS13310	PF00005	ABC transporter
RG54_RS13310	PF12698	ABC-2 family transporter protein
RG54_RS13315	PF13437	HlyD family secretion protein
RG54_RS13315	PF13533	Biotin-lipoyl like
RG54_RS13320	PF13258	RG54_RS13320
RG54_RS13325	PF13258	RG54_RS13325
RG54_RS13340	PF10951	RG54_RS13340
RG54_RS13345	PF03486	HI0933-like protein
RG54_RS13350	PF01384	RG54_RS13350
RG54_RS13360	PF10625	RG54_RS13360
RG54_RS13365	PF00582	Universal stress protein family
RG54_RS13375	PF00854	POT family
RG54_RS13380	PF04445	Putative SAM-dependent methyltransferase
RG54_RS13385	PF01432	Peptidase family M3
RG54_RS13390	PF04378	Ribosomal RNA small subunit methyltransferase D, RsmJ
RG54_RS13395	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
RG54_RS13395	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RG54_RS13410	PF01022	Bacterial regulatory protein, arsR family
RG54_RS13415	PF02040	RG54_RS13415
RG54_RS13420	PF03960	ArsC family
RG54_RS13425	PF12840	Helix-turn-helix domain
RG54_RS13430	PF03773	RG54_RS13430
RG54_RS13440	PF03843	RG54_RS13440
RG54_RS13450	PF00196	Bacterial regulatory proteins, luxR family
RG54_RS13455	PF02308	RG54_RS13455
RG54_RS13460	PF06411	HdeA/HdeB family
RG54_RS13465	PF06411	HdeA/HdeB family
RG54_RS13470	PF03729	RG54_RS13470
RG54_RS13475	PF00196	Bacterial regulatory proteins, luxR family
RG54_RS13485	PF00529	HlyD family secretion protein
RG54_RS13485	PF16576	RG54_RS13485
RG54_RS13490	PF00873	AcrB/AcrD/AcrF family
RG54_RS13500	PF12833	Helix-turn-helix domain
RG54_RS13505	PF12833	Helix-turn-helix domain
RG54_RS13510	PF00282	Pyridoxal-dependent decarboxylase conserved domain
RG54_RS13515	PF00034	Cytochrome c
RG54_RS13515	PF03150	Di-haem cytochrome c peroxidase
RG54_RS13515	PF14376	RG54_RS13515
RG54_RS13520	PF01204	Trehalase
RG54_RS13525	PF00196	Bacterial regulatory proteins, luxR family
RG54_RS13530	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS13530	PF03466	LysR substrate binding domain
RG54_RS13535	PF03631	RG54_RS13535
RG54_RS13540	PF00083	Sugar (and other) transporter
RG54_RS13540	PF07690	Major Facilitator Superfamily
RG54_RS13545	PF05170	RG54_RS13545
RG54_RS13550	PF00563	EAL domain
RG54_RS13560	PF00294	pfkB family carbohydrate kinase
RG54_RS13565	PF00675	Insulinase (Peptidase family M16)
RG54_RS13565	PF05193	Peptidase M16 inactive domain
RG54_RS13575	PF00375	Sodium:dicarboxylate symporter family
RG54_RS13585	PF00563	EAL domain
RG54_RS13585	PF00672	HAMP domain
RG54_RS13585	PF00990	GGDEF domain
RG54_RS13585	PF17154	RG54_RS13585
RG54_RS13590	PF05420	RG54_RS13590
RG54_RS13590	PF13432	Tetratricopeptide repeat
RG54_RS13590	PF14559	Tetratricopeptide repeat
RG54_RS13595	PF01270	Glycosyl hydrolases family 8
RG54_RS13600	PF03170	Bacterial cellulose synthase subunit
RG54_RS13605	PF00535	Glycosyl transferase family 2
RG54_RS13605	PF03552	Cellulose synthase
RG54_RS13605	PF07238	PilZ domain
RG54_RS13610	PF06564	YhjQ protein
RG54_RS13615	PF10945	RG54_RS13615
RG54_RS13620	PF10995	RG54_RS13620
RG54_RS13625	PF11120	RG54_RS13625
RG54_RS13630	PF11658	RG54_RS13630
RG54_RS13635	PF13940	RG54_RS13635
RG54_RS13645	PF13940	RG54_RS13645
RG54_RS13655	PF13940	RG54_RS13655
RG54_RS13670	PF03222	Tryptophan/tyrosine permease family
RG54_RS13675	PF00005	ABC transporter
RG54_RS13675	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RG54_RS13680	PF00005	ABC transporter
RG54_RS13680	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RG54_RS13685	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS13685	PF12911	RG54_RS13685
RG54_RS13690	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS13695	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RG54_RS13715	PF00884	Sulfatase
RG54_RS13715	PF08019	RG54_RS13715
RG54_RS13720	PF00419	Fimbrial protein
RG54_RS13725	PF00419	Fimbrial protein
RG54_RS13730	PF00577	Outer membrane usher protein
RG54_RS13730	PF13953	PapC C-terminal domain
RG54_RS13730	PF13954	PapC N-terminal domain
RG54_RS13735	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
RG54_RS13735	PF02753	Pili assembly chaperone PapD, C-terminal domain
RG54_RS13740	PF00419	Fimbrial protein
RG54_RS13745	PF07690	Major Facilitator Superfamily
RG54_RS13755	PF03797	Autotransporter beta-domain
RG54_RS13760	PF03352	Methyladenine glycosylase
RG54_RS13765	PF13673	Acetyltransferase (GNAT) domain
RG54_RS13770	PF00384	Molybdopterin oxidoreductase
RG54_RS13770	PF01568	Molydopterin dinucleotide binding domain
RG54_RS13775	PF00691	OmpA family
RG54_RS13775	PF13488	RG54_RS13775
RG54_RS13780	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
RG54_RS13780	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
RG54_RS13785	PF11254	RG54_RS13785
RG54_RS13790	PF01381	Helix-turn-helix
RG54_RS13795	PF00313	'Cold-shock' DNA-binding domain
RG54_RS13800	PF01848	RG54_RS13800
RG54_RS13805	PF02092	RG54_RS13805
RG54_RS13805	PF05746	DALR anticodon binding domain
RG54_RS13810	PF02091	Glycyl-tRNA synthetase alpha subunit
RG54_RS13815	PF13983	RG54_RS13815
RG54_RS13820	PF01757	RG54_RS13820
RG54_RS13825	PF05360	RG54_RS13825
RG54_RS13830	PF05360	RG54_RS13830
RG54_RS13835	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
RG54_RS13835	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
RG54_RS13845	PF13407	Periplasmic binding protein domain
RG54_RS13850	PF00005	ABC transporter
RG54_RS13855	PF02653	RG54_RS13855
RG54_RS13860	PF12833	Helix-turn-helix domain
RG54_RS13860	PF13377	Periplasmic binding protein-like domain
RG54_RS13865	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
RG54_RS13870	PF00128	Alpha amylase, catalytic domain
RG54_RS13875	PF00155	Aminotransferase class I and II
RG54_RS13880	PF13247	4Fe-4S dicluster domain
RG54_RS13885	PF01614	Bacterial transcriptional regulator
RG54_RS13885	PF09339	IclR helix-turn-helix domain
RG54_RS13890	PF02615	Malate/L-lactate dehydrogenase
RG54_RS13895	PF04074	Domain of unknown function (DUF386)
RG54_RS13900	PF04290	RG54_RS13900
RG54_RS13905	PF06808	RG54_RS13905
RG54_RS13910	PF03480	Bacterial extracellular solute-binding protein, family 7
RG54_RS13915	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
RG54_RS13915	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
RG54_RS13920	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
RG54_RS13925	PF01261	Xylose isomerase-like TIM barrel
RG54_RS13930	PF00596	Class II Aldolase and Adducin N-terminal domain
RG54_RS13935	PF06629	RG54_RS13935
RG54_RS13940	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS13940	PF03466	LysR substrate binding domain
RG54_RS13945	PF00529	HlyD family secretion protein
RG54_RS13945	PF16576	RG54_RS13945
RG54_RS13950	PF11742	RG54_RS13950
RG54_RS13960	PF00171	Aldehyde dehydrogenase family
RG54_RS13965	PF00465	Iron-containing alcohol dehydrogenase
RG54_RS13970	PF00009	Elongation factor Tu GTP binding domain
RG54_RS13970	PF03144	Elongation factor Tu domain 2
RG54_RS13970	PF09106	Elongation factor SelB, winged helix
RG54_RS13970	PF09107	Elongation factor SelB, winged helix
RG54_RS13975	PF03841	L-seryl-tRNA selenium transferase
RG54_RS13975	PF12390	RG54_RS13975
RG54_RS13980	PF00043	Glutathione S-transferase, C-terminal domain
RG54_RS13980	PF13417	Glutathione S-transferase, N-terminal domain
RG54_RS13990	PF01609	Transposase DDE domain
RG54_RS13990	PF13808	RG54_RS13990
RG54_RS13995	PF03527	RG54_RS13995
RG54_RS13995	PF05593	RG54_RS13995
RG54_RS13995	PF14220	RG54_RS13995
RG54_RS14000	PF15631	RG54_RS14000
RG54_RS14010	PF03527	RG54_RS14010
RG54_RS14035	PF15596	RG54_RS14035
RG54_RS14040	PF00529	HlyD family secretion protein
RG54_RS14040	PF16576	RG54_RS14040
RG54_RS14045	PF11742	RG54_RS14045
RG54_RS14050	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
RG54_RS14050	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
RG54_RS14050	PF02378	Phosphotransferase system, EIIC
RG54_RS14055	PF01232	Mannitol dehydrogenase Rossmann domain
RG54_RS14055	PF08125	Mannitol dehydrogenase C-terminal domain
RG54_RS14060	PF05068	Mannitol repressor
RG54_RS14070	PF10928	Protein of unknown function (DUF2810)
RG54_RS14080	PF11622	Protein of unknown function (DUF3251)
RG54_RS14085	PF03895	YadA-like C-terminal region
RG54_RS14085	PF05658	Head domain of trimeric autotransporter adhesin
RG54_RS14085	PF05662	Coiled stalk of trimeric autotransporter adhesin
RG54_RS14085	PF13018	RG54_RS14085
RG54_RS14090	PF02652	RG54_RS14090
RG54_RS14095	PF00392	Bacterial regulatory proteins, gntR family
RG54_RS14095	PF07729	FCD domain
RG54_RS14100	PF01070	FMN-dependent dehydrogenase
RG54_RS14105	PF00588	SpoU rRNA Methylase family
RG54_RS14110	PF00132	Bacterial transferase hexapeptide (six repeats)
RG54_RS14110	PF06426	Serine acetyltransferase, N-terminal
RG54_RS14115	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
RG54_RS14115	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
RG54_RS14120	PF02556	Preprotein translocase subunit SecB
RG54_RS14125	PF00462	Glutaredoxin
RG54_RS14130	PF00581	Rhodanese-like domain
RG54_RS14140	PF01676	Metalloenzyme superfamily
RG54_RS14140	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
RG54_RS14145	PF01551	Peptidase family M23
RG54_RS14150	PF04748	Divergent polysaccharide deacetylase
RG54_RS14155	PF00535	Glycosyl transferase family 2
RG54_RS14160	PF00107	Zinc-binding dehydrogenase
RG54_RS14160	PF08240	Alcohol dehydrogenase GroES-like domain
RG54_RS14165	PF00155	Aminotransferase class I and II
RG54_RS14170	PF01370	NAD dependent epimerase/dehydratase family
RG54_RS14175	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
RG54_RS14180	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
RG54_RS14190	PF01755	RG54_RS14190
RG54_RS14195	PF01501	Glycosyl transferase family 8
RG54_RS14195	PF08437	RG54_RS14195
RG54_RS14200	PF06176	Lipopolysaccharide core biosynthesis protein (WaaY)
RG54_RS14205	PF01501	Glycosyl transferase family 8
RG54_RS14205	PF08437	RG54_RS14205
RG54_RS14210	PF01501	Glycosyl transferase family 8
RG54_RS14210	PF08437	RG54_RS14210
RG54_RS14215	PF06293	Lipopolysaccharide kinase (Kdo/WaaP) family
RG54_RS14220	PF00534	Glycosyl transferases group 1
RG54_RS14220	PF13439	Glycosyltransferase Family 4
RG54_RS14225	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
RG54_RS14230	PF00534	Glycosyl transferases group 1
RG54_RS14230	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
RG54_RS14235	PF01467	Cytidylyltransferase
RG54_RS14240	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
RG54_RS14240	PF06827	Zinc finger found in FPG and IleRS
RG54_RS14240	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
RG54_RS14245	PF00471	Ribosomal protein L33
RG54_RS14250	PF00830	Ribosomal L28 family
RG54_RS14255	PF04002	RadC-like JAB domain
RG54_RS14260	PF02441	Flavoprotein
RG54_RS14260	PF04127	DNA / pantothenate metabolism flavoprotein
RG54_RS14265	PF00692	dUTPase
RG54_RS14270	PF00440	Bacterial regulatory proteins, tetR family
RG54_RS14275	PF00156	Phosphoribosyl transferase domain
RG54_RS14280	PF01138	3' exoribonuclease family, domain 1
RG54_RS14280	PF03725	3' exoribonuclease family, domain 2
RG54_RS14290	PF03755	RG54_RS14290
RG54_RS14290	PF08340	RG54_RS14290
RG54_RS14295	PF02498	RG54_RS14295
RG54_RS14300	PF03458	RG54_RS14300
RG54_RS14305	PF01653	NAD-dependent DNA ligase adenylation domain
RG54_RS14305	PF03120	NAD-dependent DNA ligase OB-fold domain
RG54_RS14310	PF00625	Guanylate kinase
RG54_RS14315	PF01192	RNA polymerase Rpb6
RG54_RS14320	PF02824	TGS domain
RG54_RS14320	PF04607	Region found in RelA / SpoT proteins
RG54_RS14320	PF13291	ACT domain
RG54_RS14320	PF13328	HD domain
RG54_RS14325	PF00588	SpoU rRNA Methylase family
RG54_RS14325	PF12105	SpoU, rRNA methylase, C-terminal
RG54_RS14330	PF00270	DEAD/DEAH box helicase
RG54_RS14330	PF00271	Helicase conserved C-terminal domain
RG54_RS14330	PF17191	RG54_RS14330
RG54_RS14340	PF03616	RG54_RS14340
RG54_RS14345	PF00860	Permease family
RG54_RS14350	PF05170	RG54_RS14350
RG54_RS14355	PF01055	Glycosyl hydrolases family 31
RG54_RS14355	PF13802	Galactose mutarotase-like
RG54_RS14360	PF13347	MFS/sugar transport protein
RG54_RS14375	PF07690	Major Facilitator Superfamily
RG54_RS14380	PF00892	EamA-like transporter family
RG54_RS14385	PF03180	NLPA lipoprotein
RG54_RS14405	PF07690	Major Facilitator Superfamily
RG54_RS14415	PF06711	RG54_RS14415
RG54_RS14420	PF00860	Permease family
RG54_RS14425	PF01979	Amidohydrolase family
RG54_RS14425	PF13382	Adenine deaminase C-terminal domain
RG54_RS14430	PF07690	Major Facilitator Superfamily
RG54_RS14435	PF07690	Major Facilitator Superfamily
RG54_RS14440	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS14440	PF05231	RG54_RS14440
RG54_RS14440	PF07730	Histidine kinase
RG54_RS14445	PF00072	Response regulator receiver domain
RG54_RS14445	PF00196	Bacterial regulatory proteins, luxR family
RG54_RS14450	PF01842	ACT domain
RG54_RS14455	PF00205	Thiamine pyrophosphate enzyme, central domain
RG54_RS14455	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
RG54_RS14455	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
RG54_RS14460	PF08049	RG54_RS14460
RG54_RS14480	PF13939	RG54_RS14480
RG54_RS14490	PF07690	Major Facilitator Superfamily
RG54_RS14500	PF02656	RG54_RS14500
RG54_RS14505	PF02656	RG54_RS14505
RG54_RS14515	PF00884	Sulfatase
RG54_RS14515	PF16347	RG54_RS14515
RG54_RS14520	PF00474	Sodium:solute symporter family
RG54_RS14525	PF02311	AraC-like ligand binding domain
RG54_RS14525	PF12833	Helix-turn-helix domain
RG54_RS14535	PF02056	Family 4 glycosyl hydrolase
RG54_RS14540	PF00367	phosphotransferase system, EIIB
RG54_RS14540	PF02378	Phosphotransferase system, EIIC
RG54_RS14545	PF00392	Bacterial regulatory proteins, gntR family
RG54_RS14545	PF07702	UTRA domain
RG54_RS14550	PF02080	TrkA-C domain
RG54_RS14550	PF06826	RG54_RS14550
RG54_RS14560	PF00011	Hsp20/alpha crystallin family
RG54_RS14565	PF00011	Hsp20/alpha crystallin family
RG54_RS14570	PF07119	RG54_RS14570
RG54_RS14575	PF07676	WD40-like Beta Propeller Repeat
RG54_RS14575	PF12566	RG54_RS14575
RG54_RS14580	PF01494	FAD binding domain
RG54_RS14585	PF07690	Major Facilitator Superfamily
RG54_RS14590	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
RG54_RS14590	PF13378	Enolase C-terminal domain-like
RG54_RS14595	PF01081	KDPG and KHG aldolase
RG54_RS14600	PF05035	2-keto-3-deoxy-galactonokinase
RG54_RS14605	PF00392	Bacterial regulatory proteins, gntR family
RG54_RS14605	PF07729	FCD domain
RG54_RS14615	PF08282	haloacid dehalogenase-like hydrolase
RG54_RS14620	PF06078	Bacterial protein of unknown function (DUF937)
RG54_RS14625	PF00204	DNA gyrase B
RG54_RS14625	PF00986	DNA gyrase B subunit, carboxyl terminus
RG54_RS14625	PF01751	Toprim domain
RG54_RS14625	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS14630	PF02463	RecF/RecN/SMC N terminal domain
RG54_RS14635	PF00712	DNA polymerase III beta subunit, N-terminal domain
RG54_RS14635	PF02767	DNA polymerase III beta subunit, central domain
RG54_RS14635	PF02768	DNA polymerase III beta subunit, C-terminal domain
RG54_RS14640	PF00308	Bacterial dnaA  protein
RG54_RS14640	PF08299	Bacterial dnaA protein helix-turn-helix
RG54_RS14640	PF11638	DnaA N-terminal domain
RG54_RS14650	PF00468	Ribosomal protein L34
RG54_RS14655	PF00825	Ribonuclease P
RG54_RS14660	PF01809	RG54_RS14660
RG54_RS14665	PF02096	60Kd inner membrane protein
RG54_RS14665	PF14849	YidC periplasmic domain
RG54_RS14670	PF01926	50S ribosome-binding GTPase
RG54_RS14670	PF10396	GTP-binding protein TrmE N-terminus
RG54_RS14670	PF12631	Catalytic cysteine-containing C-terminus of GTPase, MnmE
RG54_RS14675	PF08053	RG54_RS14675
RG54_RS14680	PF01212	Beta-eliminating lyase
RG54_RS14685	PF03222	Tryptophan/tyrosine permease family
RG54_RS14690	PF07690	Major Facilitator Superfamily
RG54_RS14695	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS14695	PF03466	LysR substrate binding domain
RG54_RS14705	PF03358	NADPH-dependent FMN reductase
RG54_RS14710	PF00860	Permease family
RG54_RS14715	PF13419	Haloacid dehalogenase-like hydrolase
RG54_RS14725	PF03691	RG54_RS14725
RG54_RS14730	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
RG54_RS14735	PF00756	Putative esterase
RG54_RS14735	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
RG54_RS14740	PF02264	LamB porin
RG54_RS14740	PF11471	RG54_RS14740
RG54_RS14745	PF00232	Glycosyl hydrolase family 1
RG54_RS14750	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
RG54_RS14750	PF00367	phosphotransferase system, EIIB
RG54_RS14750	PF02378	Phosphotransferase system, EIIC
RG54_RS14755	PF00874	PRD domain
RG54_RS14755	PF03123	CAT RNA binding domain
RG54_RS14760	PF01895	PhoU domain
RG54_RS14765	PF00005	ABC transporter
RG54_RS14770	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS14775	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS14780	PF12849	PBP superfamily domain
RG54_RS14785	PF00419	Fimbrial protein
RG54_RS14790	PF00577	Outer membrane usher protein
RG54_RS14790	PF13953	PapC C-terminal domain
RG54_RS14790	PF13954	PapC N-terminal domain
RG54_RS14795	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
RG54_RS14795	PF02753	Pili assembly chaperone PapD, C-terminal domain
RG54_RS14800	PF00419	Fimbrial protein
RG54_RS14805	PF01380	SIS domain
RG54_RS14805	PF13522	Glutamine amidotransferase domain
RG54_RS14810	PF00132	Bacterial transferase hexapeptide (six repeats)
RG54_RS14810	PF12804	MobA-like NTP transferase domain
RG54_RS14820	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
RG54_RS14820	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
RG54_RS14825	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
RG54_RS14825	PF02874	ATP synthase alpha/beta family, beta-barrel domain
RG54_RS14830	PF00231	ATP synthase
RG54_RS14835	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
RG54_RS14835	PF00306	ATP synthase alpha/beta chain, C terminal domain
RG54_RS14835	PF02874	ATP synthase alpha/beta family, beta-barrel domain
RG54_RS14840	PF00213	ATP synthase delta (OSCP) subunit
RG54_RS14845	PF00430	ATP synthase B/B' CF(0)
RG54_RS14850	PF00137	ATP synthase subunit C
RG54_RS14855	PF00119	ATP synthase A chain
RG54_RS14860	PF03899	RG54_RS14860
RG54_RS14865	PF02527	rRNA small subunit methyltransferase G
RG54_RS14870	PF01134	Glucose inhibited division protein A
RG54_RS14870	PF13932	GidA associated domain 3
RG54_RS14875	PF00258	Flavodoxin
RG54_RS14880	PF01037	AsnC family
RG54_RS14880	PF13412	Winged helix-turn-helix DNA-binding
RG54_RS14885	PF03590	Aspartate-ammonia ligase
RG54_RS14890	PF05762	VWA domain containing CoxE-like protein
RG54_RS14895	PF07728	AAA domain (dynein-related subfamily)
RG54_RS14895	PF12592	Protein of unknown function (DUF3763)
RG54_RS14900	PF02705	RG54_RS14900
RG54_RS14905	PF05025	RbsD / FucU transport protein family
RG54_RS14910	PF00005	ABC transporter
RG54_RS14915	PF02653	RG54_RS14915
RG54_RS14920	PF13407	Periplasmic binding protein domain
RG54_RS14925	PF00294	pfkB family carbohydrate kinase
RG54_RS14930	PF00356	Bacterial regulatory proteins, lacI family
RG54_RS14930	PF13377	Periplasmic binding protein-like domain
RG54_RS14935	PF07690	Major Facilitator Superfamily
RG54_RS14940	PF00392	Bacterial regulatory proteins, gntR family
RG54_RS14940	PF07729	FCD domain
RG54_RS14980	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS14980	PF03466	LysR substrate binding domain
RG54_RS14985	PF04219	RG54_RS14985
RG54_RS14990	PF01078	Magnesium chelatase, subunit ChlI
RG54_RS14990	PF13335	RG54_RS14990
RG54_RS14990	PF13541	Subunit ChlI of Mg-chelatase
RG54_RS14995	PF08046	RG54_RS14995
RG54_RS15000	PF00205	Thiamine pyrophosphate enzyme, central domain
RG54_RS15000	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
RG54_RS15000	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
RG54_RS15005	PF13710	ACT domain
RG54_RS15010	PF01063	Aminotransferase class IV
RG54_RS15015	PF00920	Dehydratase family
RG54_RS15020	PF00291	Pyridoxal-phosphate dependent enzyme
RG54_RS15020	PF00585	C-terminal regulatory domain of Threonine dehydratase
RG54_RS15025	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS15025	PF03466	LysR substrate binding domain
RG54_RS15030	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
RG54_RS15030	PF07991	Acetohydroxy acid isomeroreductase, catalytic domain
RG54_RS15035	PF13616	PPIC-type PPIASE domain
RG54_RS15040	PF02452	PemK-like protein
RG54_RS15045	PF00580	UvrD/REP helicase N-terminal domain
RG54_RS15045	PF13361	UvrD-like helicase C-terminal domain
RG54_RS15050	PF02541	Ppx/GppA phosphatase family
RG54_RS15060	PF00270	DEAD/DEAH box helicase
RG54_RS15060	PF00271	Helicase conserved C-terminal domain
RG54_RS15065	PF00085	Thioredoxin
RG54_RS15075	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
RG54_RS15075	PF07497	Rho termination factor, RNA-binding domain
RG54_RS15075	PF07498	Rho termination factor, N-terminal domain
RG54_RS15085	PF00953	Glycosyl transferase family 4
RG54_RS15090	PF02706	Chain length determinant protein
RG54_RS15095	PF02350	UDP-N-acetylglucosamine 2-epimerase
RG54_RS15100	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
RG54_RS15100	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
RG54_RS15100	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
RG54_RS15105	PF16363	RG54_RS15105
RG54_RS15110	PF00483	Nucleotidyl transferase
RG54_RS15120	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
RG54_RS15125	PF01943	RG54_RS15125
RG54_RS15130	PF07429	RG54_RS15130
RG54_RS15135	PF06899	RG54_RS15135
RG54_RS15140	PF03808	RG54_RS15140
RG54_RS15145	PF00324	Amino acid permease
RG54_RS15170	PF04055	Radical SAM superfamily
RG54_RS15170	PF13186	Iron-sulfur cluster-binding domain
RG54_RS15170	PF13353	4Fe-4S single cluster domain
RG54_RS15180	PF07219	RG54_RS15180
RG54_RS15180	PF07719	Tetratricopeptide repeat
RG54_RS15185	PF04375	RG54_RS15185
RG54_RS15190	PF02602	Uroporphyrinogen-III synthase HemD
RG54_RS15195	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
RG54_RS15195	PF03900	Porphobilinogen deaminase, C-terminal domain
RG54_RS15205	PF01295	RG54_RS15205
RG54_RS15205	PF12633	RG54_RS15205
RG54_RS15210	PF01491	Frataxin-like domain
RG54_RS15225	PF13627	RG54_RS15225
RG54_RS15230	PF01678	Diaminopimelate epimerase
RG54_RS15235	PF04340	Protein of unknown function, DUF484
RG54_RS15240	PF00589	Phage integrase family
RG54_RS15240	PF02899	Phage integrase, N-terminal SAM-like domain
RG54_RS15245	PF13419	Haloacid dehalogenase-like hydrolase
RG54_RS15250	PF00580	UvrD/REP helicase N-terminal domain
RG54_RS15250	PF13361	UvrD-like helicase C-terminal domain
RG54_RS15255	PF09992	Predicted periplasmic protein (DUF2233)
RG54_RS15265	PF01544	CorA-like Mg2+ transporter protein
RG54_RS15270	PF10947	RG54_RS15270
RG54_RS15280	PF00892	EamA-like transporter family
RG54_RS15285	PF03061	Thioesterase superfamily
RG54_RS15290	PF02253	Phospholipase A1
RG54_RS15295	PF00270	DEAD/DEAH box helicase
RG54_RS15295	PF00271	Helicase conserved C-terminal domain
RG54_RS15295	PF00570	HRDC domain
RG54_RS15295	PF09382	RQC domain
RG54_RS15295	PF16124	RG54_RS15295
RG54_RS15300	PF01810	RG54_RS15300
RG54_RS15305	PF01810	RG54_RS15305
RG54_RS15310	PF12146	Putative lysophospholipase
RG54_RS15315	PF08282	haloacid dehalogenase-like hydrolase
RG54_RS15320	PF00892	EamA-like transporter family
RG54_RS15325	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS15325	PF03466	LysR substrate binding domain
RG54_RS15330	PF01717	Cobalamin-independent synthase, Catalytic domain
RG54_RS15330	PF08267	Cobalamin-independent synthase, N-terminal domain
RG54_RS15335	PF01738	Dienelactone hydrolase family
RG54_RS15340	PF01048	Phosphorylase superfamily
RG54_RS15350	PF02646	RG54_RS15350
RG54_RS15355	PF01209	ubiE/COQ5 methyltransferase family
RG54_RS15360	PF02036	SCP-2 sterol transfer family
RG54_RS15365	PF03109	RG54_RS15365
RG54_RS15370	PF02416	mttA/Hcf106 family
RG54_RS15380	PF00902	Sec-independent protein translocase protein (TatC)
RG54_RS15385	PF01026	TatD related DNase
RG54_RS15390	PF02357	Transcription termination factor nusG
RG54_RS15395	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
RG54_RS15400	PF00175	Oxidoreductase NAD-binding domain
RG54_RS15400	PF00970	Oxidoreductase FAD-binding domain
RG54_RS15405	PF00108	Thiolase, N-terminal domain
RG54_RS15405	PF02803	Thiolase, C-terminal domain
RG54_RS15410	PF00378	Enoyl-CoA hydratase/isomerase family
RG54_RS15410	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
RG54_RS15410	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
RG54_RS15415	PF00557	Metallopeptidase family M24
RG54_RS15420	PF01205	Uncharacterized protein family UPF0029
RG54_RS15420	PF09186	Domain of unknown function (DUF1949)
RG54_RS15425	PF02386	Cation transport protein
RG54_RS15430	PF12724	Flavodoxin domain
RG54_RS15460	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
RG54_RS15465	PF12804	MobA-like NTP transferase domain
RG54_RS15470	PF06288	Protein of unknown function (DUF1040)
RG54_RS15475	PF01636	Phosphotransferase enzyme family
RG54_RS15480	PF01323	DSBA-like thioredoxin domain
RG54_RS15485	PF06097	RG54_RS15485
RG54_RS15490	PF01553	Acyltransferase
RG54_RS15500	PF00476	DNA polymerase family A
RG54_RS15500	PF01367	5'-3' exonuclease, C-terminal SAM fold
RG54_RS15500	PF01612	3'-5' exonuclease
RG54_RS15500	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
RG54_RS15505	PF01926	50S ribosome-binding GTPase
RG54_RS15515	PF04220	RG54_RS15515
RG54_RS15520	PF04055	Radical SAM superfamily
RG54_RS15520	PF06969	HemN C-terminal domain
RG54_RS15535	PF00072	Response regulator receiver domain
RG54_RS15535	PF00158	Sigma-54 interaction domain
RG54_RS15535	PF02954	Bacterial regulatory protein, Fis family
RG54_RS15540	PF00512	His Kinase A (phospho-acceptor) domain
RG54_RS15540	PF00989	PAS fold
RG54_RS15540	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS15545	PF00120	Glutamine synthetase, catalytic domain
RG54_RS15545	PF03951	Glutamine synthetase, beta-Grasp domain
RG54_RS15555	PF00009	Elongation factor Tu GTP binding domain
RG54_RS15555	PF00679	Elongation factor G C-terminus
RG54_RS15555	PF03144	Elongation factor Tu domain 2
RG54_RS15560	PF00392	Bacterial regulatory proteins, gntR family
RG54_RS15560	PF07702	UTRA domain
RG54_RS15565	PF01261	Xylose isomerase-like TIM barrel
RG54_RS15570	PF07690	Major Facilitator Superfamily
RG54_RS15575	PF00455	RG54_RS15575
RG54_RS15575	PF08220	DeoR-like helix-turn-helix domain
RG54_RS15580	PF00294	pfkB family carbohydrate kinase
RG54_RS15585	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
RG54_RS15585	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
RG54_RS15590	PF01791	DeoC/LacD family aldolase
RG54_RS15595	PF00107	Zinc-binding dehydrogenase
RG54_RS15595	PF08240	Alcohol dehydrogenase GroES-like domain
RG54_RS15600	PF00083	Sugar (and other) transporter
RG54_RS15605	PF00083	Sugar (and other) transporter
RG54_RS15610	PF01263	Aldose 1-epimerase
RG54_RS15615	PF13419	Haloacid dehalogenase-like hydrolase
RG54_RS15620	PF03631	RG54_RS15620
RG54_RS15625	PF02580	D-Tyr-tRNA(Tyr) deacylase
RG54_RS15630	PF09500	Putative thioesterase (yiiD_Cterm)
RG54_RS15630	PF13673	Acetyltransferase (GNAT) domain
RG54_RS15635	PF07859	alpha/beta hydrolase fold
RG54_RS15645	PF13560	Helix-turn-helix domain
RG54_RS15655	PF01402	Ribbon-helix-helix protein, copG family
RG54_RS15670	PF04216	Protein involved in formate dehydrogenase formation
RG54_RS15675	PF01292	Prokaryotic cytochrome b561
RG54_RS15680	PF09163	Formate dehydrogenase N, transmembrane
RG54_RS15680	PF13247	4Fe-4S dicluster domain
RG54_RS15695	PF02634	FdhD/NarQ family
RG54_RS15700	PF12889	Protein of unknown function (DUF3829)
RG54_RS15705	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
RG54_RS15705	PF08279	HTH domain
RG54_RS15710	PF05343	M42 glutamyl aminopeptidase
RG54_RS15715	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
RG54_RS15715	PF02378	Phosphotransferase system, EIIC
RG54_RS15720	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
RG54_RS15725	PF05336	Domain of unknown function (DUF718)
RG54_RS15730	PF00596	Class II Aldolase and Adducin N-terminal domain
RG54_RS15735	PF06134	L-rhamnose isomerase (RhaA)
RG54_RS15740	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
RG54_RS15740	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
RG54_RS15750	PF02311	AraC-like ligand binding domain
RG54_RS15750	PF12833	Helix-turn-helix domain
RG54_RS15755	PF02311	AraC-like ligand binding domain
RG54_RS15755	PF12833	Helix-turn-helix domain
RG54_RS15760	PF06379	RG54_RS15760
RG54_RS15765	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
RG54_RS15765	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
RG54_RS15780	PF03812	RG54_RS15780
RG54_RS15785	PF03473	MOSC domain
RG54_RS15785	PF03475	3-alpha domain
RG54_RS15790	PF00512	His Kinase A (phospho-acceptor) domain
RG54_RS15790	PF00672	HAMP domain
RG54_RS15790	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS15790	PF16527	RG54_RS15790
RG54_RS15795	PF00072	Response regulator receiver domain
RG54_RS15795	PF00486	Transcriptional regulatory protein, C terminal
RG54_RS15800	PF07813	LTXXQ motif family protein
RG54_RS15805	PF01545	Cation efflux family
RG54_RS15805	PF16916	RG54_RS15805
RG54_RS15810	PF00365	Phosphofructokinase
RG54_RS15825	PF13531	Bacterial extracellular solute-binding protein
RG54_RS15830	PF02611	CDP-diacylglycerol pyrophosphatase
RG54_RS15835	PF00121	Triosephosphate isomerase
RG54_RS15845	PF07305	RG54_RS15845
RG54_RS15850	PF05656	RG54_RS15850
RG54_RS15855	PF04175	Protein of unknown function (DUF406)
RG54_RS15860	PF00582	Universal stress protein family
RG54_RS15865	PF00175	Oxidoreductase NAD-binding domain
RG54_RS15865	PF00970	Oxidoreductase FAD-binding domain
RG54_RS15870	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
RG54_RS15875	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
RG54_RS15875	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
RG54_RS15880	PF00230	Major intrinsic protein
RG54_RS15885	PF06005	Protein of unknown function (DUF904)
RG54_RS15890	PF03737	Demethylmenaquinone methyltransferase
RG54_RS15895	PF01040	UbiA prenyltransferase family
RG54_RS15900	PF00004	ATPase family associated with various cellular activities (AAA)
RG54_RS15900	PF07724	AAA domain (Cdc48 subfamily)
RG54_RS15900	PF10431	C-terminal, D2-small domain, of ClpB protein
RG54_RS15905	PF00227	Proteasome subunit
RG54_RS15910	PF05036	Sporulation related domain
RG54_RS15915	PF00356	Bacterial regulatory proteins, lacI family
RG54_RS15915	PF13377	Periplasmic binding protein-like domain
RG54_RS15920	PF00270	DEAD/DEAH box helicase
RG54_RS15920	PF00271	Helicase conserved C-terminal domain
RG54_RS15925	PF01197	Ribosomal protein L31
RG54_RS15930	PF05708	Orthopoxvirus protein of unknown function (DUF830)
RG54_RS15935	PF01340	Met Apo-repressor, MetJ
RG54_RS15940	PF01053	Cys/Met metabolism PLP-dependent enzyme
RG54_RS15945	PF00696	Amino acid kinase family
RG54_RS15945	PF00742	Homoserine dehydrogenase
RG54_RS15945	PF03447	Homoserine dehydrogenase, NAD binding domain
RG54_RS15955	PF02219	Methylenetetrahydrofolate reductase
RG54_RS15960	PF00141	Peroxidase
RG54_RS15965	PF00892	EamA-like transporter family
RG54_RS15970	PF06940	RG54_RS15970
RG54_RS15975	PF15954	RG54_RS15975
RG54_RS15980	PF00465	Iron-containing alcohol dehydrogenase
RG54_RS15985	PF00923	Transaldolase
RG54_RS15990	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
RG54_RS15990	PF00381	PTS HPr component phosphorylation site
RG54_RS15990	PF00391	PEP-utilising enzyme, mobile domain
RG54_RS15990	PF02896	PEP-utilising enzyme, TIM barrel domain
RG54_RS15990	PF05524	PEP-utilising enzyme, N-terminal
RG54_RS16000	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
RG54_RS16005	PF01228	Glycine radical
RG54_RS16005	PF02901	Pyruvate formate lyase
RG54_RS16010	PF04055	Radical SAM superfamily
RG54_RS16010	PF13353	4Fe-4S single cluster domain
RG54_RS16015	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
RG54_RS16020	PF12833	Helix-turn-helix domain
RG54_RS16025	PF00884	Sulfatase
RG54_RS16025	PF08019	RG54_RS16025
RG54_RS16030	PF00311	Phosphoenolpyruvate carboxylase
RG54_RS16035	PF01546	Peptidase family M20/M25/M40
RG54_RS16035	PF07687	Peptidase dimerisation domain
RG54_RS16040	PF01118	Semialdehyde dehydrogenase, NAD binding domain
RG54_RS16040	PF02774	Semialdehyde dehydrogenase, dimerisation domain
RG54_RS16045	PF00696	Amino acid kinase family
RG54_RS16050	PF00206	Lyase
RG54_RS16050	PF14698	Argininosuccinate lyase C-terminal
RG54_RS16060	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
RG54_RS16060	PF13378	Enolase C-terminal domain-like
RG54_RS16065	PF07690	Major Facilitator Superfamily
RG54_RS16070	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS16070	PF03466	LysR substrate binding domain
RG54_RS16075	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
RG54_RS16075	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RG54_RS16085	PF00440	Bacterial regulatory proteins, tetR family
RG54_RS16090	PF07226	RG54_RS16090
RG54_RS16095	PF05958	tRNA (Uracil-5-)-methyltransferase
RG54_RS16100	PF00593	TonB dependent receptor
RG54_RS16100	PF07715	TonB-dependent Receptor Plug Domain
RG54_RS16105	PF01177	Asp/Glu/Hydantoin racemase
RG54_RS16135	PF01565	FAD binding domain
RG54_RS16135	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
RG54_RS16140	PF02237	Biotin protein ligase C terminal domain
RG54_RS16140	PF03099	Biotin/lipoate A/B protein ligase family
RG54_RS16140	PF08279	HTH domain
RG54_RS16145	PF00485	Phosphoribulokinase / Uridine kinase family
RG54_RS16180	PF00009	Elongation factor Tu GTP binding domain
RG54_RS16180	PF03143	Elongation factor Tu C-terminal domain
RG54_RS16180	PF03144	Elongation factor Tu domain 2
RG54_RS16185	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
RG54_RS16190	PF00467	KOW motif
RG54_RS16190	PF02357	Transcription termination factor nusG
RG54_RS16195	PF00298	Ribosomal protein L11, RNA binding domain
RG54_RS16195	PF03946	Ribosomal protein L11, N-terminal domain
RG54_RS16200	PF00687	Ribosomal protein L1p/L10e family
RG54_RS16210	PF00466	Ribosomal protein L10
RG54_RS16215	PF00542	Ribosomal protein L7/L12 C-terminal domain
RG54_RS16215	PF16320	RG54_RS16215
RG54_RS16220	PF00562	RNA polymerase Rpb2, domain 6
RG54_RS16220	PF04560	RNA polymerase Rpb2, domain 7
RG54_RS16220	PF04561	RNA polymerase Rpb2, domain 2
RG54_RS16220	PF04563	RNA polymerase beta subunit
RG54_RS16220	PF04565	RNA polymerase Rpb2, domain 3
RG54_RS16220	PF10385	RNA polymerase beta subunit external 1 domain
RG54_RS16225	PF00623	RNA polymerase Rpb1, domain 2
RG54_RS16225	PF04983	RNA polymerase Rpb1, domain 3
RG54_RS16225	PF04997	RNA polymerase Rpb1, domain 1
RG54_RS16225	PF04998	RNA polymerase Rpb1, domain 5
RG54_RS16225	PF05000	RNA polymerase Rpb1, domain 4
RG54_RS16235	PF04055	Radical SAM superfamily
RG54_RS16235	PF06968	Biotin and Thiamin Synthesis associated domain
RG54_RS16240	PF05690	Thiazole biosynthesis protein ThiG
RG54_RS16245	PF02597	ThiS family
RG54_RS16250	PF00899	ThiF family
RG54_RS16255	PF02581	Thiamine monophosphate synthase/TENI
RG54_RS16260	PF01964	ThiC family
RG54_RS16260	PF13667	ThiC-associated domain
RG54_RS16265	PF04353	Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
RG54_RS16270	PF00293	NUDIX domain
RG54_RS16270	PF09297	NADH pyrophosphatase zinc ribbon domain
RG54_RS16275	PF01208	Uroporphyrinogen decarboxylase (URO-D)
RG54_RS16280	PF04493	Endonuclease V
RG54_RS16285	PF04222	Protein of unknown function (DUF416)
RG54_RS16290	PF00216	Bacterial DNA-binding protein
RG54_RS16295	PF07356	RG54_RS16295
RG54_RS16295	PF08139	RG54_RS16295
RG54_RS16300	PF13801	Heavy-metal resistance
RG54_RS16310	PF00512	His Kinase A (phospho-acceptor) domain
RG54_RS16310	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS16315	PF00072	Response regulator receiver domain
RG54_RS16315	PF00158	Sigma-54 interaction domain
RG54_RS16315	PF02954	Bacterial regulatory protein, Fis family
RG54_RS16320	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
RG54_RS16320	PF02843	Phosphoribosylglycinamide synthetase, C domain
RG54_RS16320	PF02844	Phosphoribosylglycinamide synthetase, N domain
RG54_RS16325	PF01808	AICARFT/IMPCHase bienzyme
RG54_RS16325	PF02142	MGS-like domain
RG54_RS16360	PF13673	Acetyltransferase (GNAT) domain
RG54_RS16365	PF04204	Homoserine O-succinyltransferase
RG54_RS16370	PF01274	Malate synthase
RG54_RS16375	PF00463	Isocitrate lyase family
RG54_RS16385	PF06315	Isocitrate dehydrogenase kinase/phosphatase (AceK)
RG54_RS16395	PF07906	RG54_RS16395
RG54_RS16400	PF01614	Bacterial transcriptional regulator
RG54_RS16400	PF09339	IclR helix-turn-helix domain
RG54_RS16405	PF00809	Pterin binding enzyme
RG54_RS16405	PF02310	B12 binding domain
RG54_RS16405	PF02574	Homocysteine S-methyltransferase
RG54_RS16405	PF02607	B12 binding domain
RG54_RS16405	PF02965	Vitamin B12 dependent methionine synthase, activation domain
RG54_RS16410	PF02690	RG54_RS16410
RG54_RS16415	PF03575	Peptidase family S51
RG54_RS16420	PF00849	RNA pseudouridylate synthase
RG54_RS16420	PF01479	S4 domain
RG54_RS16425	PF11656	RG54_RS16425
RG54_RS16430	PF01145	SPFH domain / Band 7 family
RG54_RS16435	PF10127	RG54_RS16435
RG54_RS16440	PF06414	Zeta toxin
RG54_RS16445	PF00696	Amino acid kinase family
RG54_RS16445	PF01842	ACT domain
RG54_RS16455	PF00342	Phosphoglucose isomerase
RG54_RS16460	PF11106	RG54_RS16460
RG54_RS16465	PF11102	Group 4 capsule polysaccharide formation lipoprotein gfcB
RG54_RS16470	PF06251	Capsule biosynthesis GfcC
RG54_RS16475	PF06082	RG54_RS16475
RG54_RS16480	PF17089	RG54_RS16480
RG54_RS16485	PF06146	RG54_RS16485
RG54_RS16490	PF00083	Sugar (and other) transporter
RG54_RS16495	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS16500	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS16500	PF14785	Maltose transport system permease protein MalF P2 domain
RG54_RS16505	PF13416	Bacterial extracellular solute-binding protein
RG54_RS16515	PF00005	ABC transporter
RG54_RS16515	PF08402	TOBE domain
RG54_RS16520	PF02264	LamB porin
RG54_RS16525	PF07148	RG54_RS16525
RG54_RS16535	PF13599	Pentapeptide repeats (9 copies)
RG54_RS16535	PF13981	SopA-like central domain
RG54_RS16545	PF04345	Chorismate lyase
RG54_RS16550	PF01040	UbiA prenyltransferase family
RG54_RS16560	PF01553	Acyltransferase
RG54_RS16565	PF01219	Prokaryotic diacylglycerol kinase
RG54_RS16570	PF00717	Peptidase S24-like
RG54_RS16570	PF01726	LexA DNA binding domain
RG54_RS16575	PF01554	MatE
RG54_RS16580	PF05532	CsbD-like
RG54_RS16585	PF01475	Ferric uptake regulator family
RG54_RS16595	PF10897	RG54_RS16595
RG54_RS16600	PF01207	Dihydrouridine synthase (Dus)
RG54_RS16605	PF09583	RG54_RS16605
RG54_RS16610	PF00107	Zinc-binding dehydrogenase
RG54_RS16610	PF08240	Alcohol dehydrogenase GroES-like domain
RG54_RS16615	PF00772	DnaB-like helicase N terminal domain
RG54_RS16615	PF03796	DnaB-like helicase C terminal domain
RG54_RS16620	PF00842	Alanine racemase, C-terminal domain
RG54_RS16620	PF01168	Alanine racemase, N-terminal domain
RG54_RS16625	PF04973	RG54_RS16625
RG54_RS16630	PF13521	AAA domain
RG54_RS16635	PF00155	Aminotransferase class I and II
RG54_RS16650	PF03767	HAD superfamily, subfamily IIIB (Acid phosphatase)
RG54_RS16655	PF01894	Uncharacterised protein family UPF0047
RG54_RS16660	PF04237	YjbR
RG54_RS16665	PF00005	ABC transporter
RG54_RS16675	PF00436	Single-strand binding protein family
RG54_RS16680	PF15940	RG54_RS16680
RG54_RS16690	PF00563	EAL domain
RG54_RS16690	PF12792	RG54_RS16690
RG54_RS16695	PF12833	Helix-turn-helix domain
RG54_RS16700	PF00376	MerR family regulatory protein
RG54_RS16700	PF09278	MerR, DNA binding
RG54_RS16720	PF00860	Permease family
RG54_RS16725	PF00999	Sodium/hydrogen exchanger family
RG54_RS16730	PF00805	Pentapeptide repeats (8 copies)
RG54_RS16730	PF13599	Pentapeptide repeats (9 copies)
RG54_RS16735	PF00474	Sodium:solute symporter family
RG54_RS16740	PF04341	RG54_RS16740
RG54_RS16745	PF00501	AMP-binding enzyme
RG54_RS16745	PF13193	AMP-binding enzyme C-terminal domain
RG54_RS16745	PF16177	RG54_RS16745
RG54_RS16755	PF02335	Cytochrome c552
RG54_RS16760	PF09699	Doubled CXXCH motif (Paired_CXXCH_1)
RG54_RS16760	PF13435	Cytochrome c554 and c-prime
RG54_RS16765	PF00037	4Fe-4S binding domain
RG54_RS16765	PF13247	4Fe-4S dicluster domain
RG54_RS16770	PF03916	RG54_RS16770
RG54_RS16775	PF01578	RG54_RS16775
RG54_RS16775	PF16327	RG54_RS16775
RG54_RS16780	PF03918	Cytochrome C biogenesis protein
RG54_RS16795	PF00375	Sodium:dicarboxylate symporter family
RG54_RS16800	PF08238	Sel1 repeat
RG54_RS16810	PF02321	Outer membrane efflux protein
RG54_RS16815	PF04632	RG54_RS16815
RG54_RS16820	PF13437	HlyD family secretion protein
RG54_RS16820	PF13533	Biotin-lipoyl like
RG54_RS16825	PF17090	RG54_RS16825
RG54_RS16835	PF02502	Ribose/Galactose Isomerase
RG54_RS16845	PF12706	Beta-lactamase superfamily domain
RG54_RS16850	PF00583	Acetyltransferase (GNAT) family
RG54_RS16855	PF13238	AAA domain
RG54_RS16860	PF07969	Amidohydrolase family
RG54_RS16865	PF00005	ABC transporter
RG54_RS16875	PF00005	ABC transporter
RG54_RS16880	PF06007	RG54_RS16880
RG54_RS16885	PF05861	RG54_RS16885
RG54_RS16890	PF05845	Bacterial phosphonate metabolism protein (PhnH)
RG54_RS16895	PF06754	RG54_RS16895
RG54_RS16900	PF00392	Bacterial regulatory proteins, gntR family
RG54_RS16900	PF07702	UTRA domain
RG54_RS16905	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS16910	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
RG54_RS16915	PF00005	ABC transporter
RG54_RS16920	PF06983	3-demethylubiquinone-9 3-methyltransferase
RG54_RS16925	PF03831	PhnA protein
RG54_RS16925	PF08274	PhnA Zinc-Ribbon
RG54_RS16935	PF00350	Dynamin family
RG54_RS16940	PF13990	RG54_RS16940
RG54_RS16945	PF00083	Sugar (and other) transporter
RG54_RS16945	PF08946	Osmosensory transporter coiled coil
RG54_RS16955	PF00512	His Kinase A (phospho-acceptor) domain
RG54_RS16955	PF00672	HAMP domain
RG54_RS16955	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS16960	PF00072	Response regulator receiver domain
RG54_RS16960	PF00486	Transcriptional regulatory protein, C terminal
RG54_RS16965	PF00884	Sulfatase
RG54_RS16965	PF08019	RG54_RS16965
RG54_RS16970	PF13520	Amino acid permease
RG54_RS16975	PF12833	Helix-turn-helix domain
RG54_RS16985	PF12833	Helix-turn-helix domain
RG54_RS16995	PF02056	Family 4 glycosyl hydrolase
RG54_RS16995	PF11975	Family 4 glycosyl hydrolase C-terminal domain
RG54_RS17000	PF13347	MFS/sugar transport protein
RG54_RS17005	PF09997	RG54_RS17005
RG54_RS17010	PF05681	RG54_RS17010
RG54_RS17010	PF05683	Fumarase C-terminus
RG54_RS17015	PF03605	RG54_RS17015
RG54_RS17025	PF00072	Response regulator receiver domain
RG54_RS17030	PF00989	PAS fold
RG54_RS17030	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS17030	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
RG54_RS17030	PF17203	RG54_RS17030
RG54_RS17035	PF13276	RG54_RS17035
RG54_RS17040	PF01527	Transposase
RG54_RS17050	PF13437	HlyD family secretion protein
RG54_RS17055	PF00005	ABC transporter
RG54_RS17055	PF00664	ABC transporter transmembrane region
RG54_RS17055	PF03412	Peptidase C39 family
RG54_RS17060	PF13276	RG54_RS17060
RG54_RS17075	PF00419	Fimbrial protein
RG54_RS17085	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
RG54_RS17085	PF02753	Pili assembly chaperone PapD, C-terminal domain
RG54_RS17090	PF00577	Outer membrane usher protein
RG54_RS17090	PF13954	PapC N-terminal domain
RG54_RS17095	PF00419	Fimbrial protein
RG54_RS17100	PF02395	Immunoglobulin A1 protease
RG54_RS17100	PF03797	Autotransporter beta-domain
RG54_RS17105	PF12833	Helix-turn-helix domain
RG54_RS17110	PF02395	Immunoglobulin A1 protease
RG54_RS17110	PF03797	Autotransporter beta-domain
RG54_RS17115	PF14542	GCN5-related N-acetyl-transferase
RG54_RS17125	PF11080	Protein of unknown function (DUF2622)
RG54_RS17130	PF10753	RG54_RS17130
RG54_RS17135	PF00152	tRNA synthetases class II (D, K and N)
RG54_RS17135	PF01336	OB-fold nucleic acid binding domain
RG54_RS17140	PF00854	POT family
RG54_RS17145	PF01276	Orn/Lys/Arg decarboxylase, major domain
RG54_RS17145	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
RG54_RS17145	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
RG54_RS17150	PF13520	Amino acid permease
RG54_RS17160	PF00486	Transcriptional regulatory protein, C terminal
RG54_RS17170	PF13708	RG54_RS17170
RG54_RS17175	PF06117	RG54_RS17175
RG54_RS17185	PF06755	RG54_RS17185
RG54_RS17190	PF06154	YagB/YeeU/YfjZ family
RG54_RS17200	PF06174	RG54_RS17200
RG54_RS17205	PF04002	RadC-like JAB domain
RG54_RS17210	PF03230	Antirestriction protein
RG54_RS17215	PF06067	RG54_RS17215
RG54_RS17220	PF03050	RG54_RS17220
RG54_RS17220	PF13005	RG54_RS17220
RG54_RS17220	PF13007	RG54_RS17220
RG54_RS17220	PF13817	RG54_RS17220
RG54_RS17225	PF05717	RG54_RS17225
RG54_RS17240	PF06006	Bacterial protein of unknown function (DUF905)
RG54_RS17255	PF03797	Autotransporter beta-domain
RG54_RS17255	PF13018	RG54_RS17255
RG54_RS17255	PF16168	RG54_RS17255
RG54_RS17260	PF01926	50S ribosome-binding GTPase
RG54_RS17265	PF13148	RG54_RS17265
RG54_RS17285	PF05930	Prophage CP4-57 regulatory protein (AlpA)
RG54_RS17300	PF05321	Haemolysin expression modulating protein
RG54_RS17315	PF11726	RG54_RS17315
RG54_RS17320	PF11682	RG54_RS17320
RG54_RS17325	PF11682	RG54_RS17325
RG54_RS17330	PF11726	RG54_RS17330
RG54_RS17335	PF11726	RG54_RS17335
RG54_RS17360	PF13973	RG54_RS17360
RG54_RS17365	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
RG54_RS17365	PF08479	POTRA domain, ShlB-type
RG54_RS17370	PF02794	RG54_RS17370
RG54_RS17375	PF04829	RG54_RS17375
RG54_RS17375	PF05594	RG54_RS17375
RG54_RS17375	PF05860	haemagglutination activity domain
RG54_RS17375	PF13018	RG54_RS17375
RG54_RS17375	PF13332	RG54_RS17375
RG54_RS17395	PF06316	Enterobacterial Ail/Lom protein
RG54_RS17400	PF00580	UvrD/REP helicase N-terminal domain
RG54_RS17400	PF08378	RG54_RS17400
RG54_RS17400	PF13361	UvrD-like helicase C-terminal domain
RG54_RS17400	PF13538	UvrD-like helicase C-terminal domain
RG54_RS17425	PF01507	Phosphoadenosine phosphosulfate reductase family
RG54_RS17430	PF01527	Transposase
RG54_RS17435	PF03611	RG54_RS17435
RG54_RS17440	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
RG54_RS17445	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
RG54_RS17450	PF00356	Bacterial regulatory proteins, lacI family
RG54_RS17450	PF13377	Periplasmic binding protein-like domain
RG54_RS17460	PF00109	Beta-ketoacyl synthase, N-terminal domain
RG54_RS17460	PF02801	Beta-ketoacyl synthase, C-terminal domain
RG54_RS17465	PF13561	Enoyl-(Acyl carrier protein) reductase
RG54_RS17470	PF07977	FabA-like domain
RG54_RS17475	PF00109	Beta-ketoacyl synthase, N-terminal domain
RG54_RS17475	PF02801	Beta-ketoacyl synthase, C-terminal domain
RG54_RS17480	PF11659	RG54_RS17480
RG54_RS17485	PF03176	MMPL family
RG54_RS17490	PF03548	Outer membrane lipoprotein carrier protein LolA
RG54_RS17495	PF13279	Thioesterase-like superfamily
RG54_RS17500	PF00535	Glycosyl transferase family 2
RG54_RS17510	PF00501	AMP-binding enzyme
RG54_RS17520	PF00550	Phosphopantetheine attachment site
RG54_RS17525	PF00550	Phosphopantetheine attachment site
RG54_RS17530	PF01553	Acyltransferase
RG54_RS17535	PF13723	RG54_RS17535
RG54_RS17540	PF00891	O-methyltransferase
RG54_RS17555	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
RG54_RS17555	PF08479	POTRA domain, ShlB-type
RG54_RS17560	PF04829	RG54_RS17560
RG54_RS17560	PF05860	haemagglutination activity domain
RG54_RS17560	PF13332	RG54_RS17560
RG54_RS17565	PF04591	Protein of unknown function, DUF596
RG54_RS17570	PF10754	RG54_RS17570
RG54_RS17595	PF00665	Integrase core domain
RG54_RS17610	PF03050	RG54_RS17610
RG54_RS17615	PF03050	RG54_RS17615
RG54_RS17615	PF13005	RG54_RS17615
RG54_RS17615	PF13007	RG54_RS17615
RG54_RS17615	PF13817	RG54_RS17615
RG54_RS17620	PF05717	RG54_RS17620
RG54_RS17625	PF01527	Transposase
RG54_RS17650	PF00589	Phage integrase family
RG54_RS17650	PF13356	Domain of unknown function (DUF4102)
RG54_RS17665	PF02683	RG54_RS17665
RG54_RS17665	PF11412	Disulphide bond corrector protein DsbC
RG54_RS17665	PF13899	Thioredoxin-like
RG54_RS17670	PF03091	CutA1 divalent ion tolerance protein
RG54_RS17675	PF03605	RG54_RS17675
RG54_RS17680	PF00206	Lyase
RG54_RS17680	PF10415	Fumarase C C-terminus
RG54_RS17690	PF04186	RG54_RS17690
RG54_RS17695	PF13520	Amino acid permease
RG54_RS17700	PF00166	Chaperonin 10 Kd subunit
RG54_RS17705	PF00118	TCP-1/cpn60 chaperonin family
RG54_RS17710	PF13698	RG54_RS17710
RG54_RS17715	PF15922	RG54_RS17715
RG54_RS17720	PF04055	Radical SAM superfamily
RG54_RS17720	PF13353	4Fe-4S single cluster domain
RG54_RS17725	PF01132	Elongation factor P (EF-P) OB domain
RG54_RS17725	PF08207	Elongation factor P (EF-P) KOW-like domain
RG54_RS17725	PF09285	Elongation factor P, C-terminal
RG54_RS17730	PF08085	RG54_RS17730
RG54_RS17735	PF08085	RG54_RS17735
RG54_RS17740	PF00893	Small Multidrug Resistance protein
RG54_RS17745	PF08212	Lipocalin-like domain
RG54_RS17750	PF00144	Beta-lactamase
RG54_RS17755	PF02313	Fumarate reductase subunit D
RG54_RS17760	PF02300	Fumarate reductase subunit C
RG54_RS17765	PF13085	2Fe-2S iron-sulfur cluster binding domain
RG54_RS17765	PF13183	4Fe-4S dicluster domain
RG54_RS17770	PF00890	FAD binding domain
RG54_RS17770	PF02910	Fumarate reductase flavoprotein C-term
RG54_RS17775	PF00152	tRNA synthetases class II (D, K and N)
RG54_RS17780	PF13520	Amino acid permease
RG54_RS17785	PF00924	Mechanosensitive ion channel
RG54_RS17785	PF12794	RG54_RS17785
RG54_RS17785	PF12795	RG54_RS17785
RG54_RS17790	PF02666	RG54_RS17790
RG54_RS17795	PF03193	Protein of unknown function, DUF258
RG54_RS17800	PF00929	Exonuclease
RG54_RS17820	PF08331	RG54_RS17820
RG54_RS17820	PF13484	RG54_RS17820
RG54_RS17825	PF01256	Carbohydrate kinase
RG54_RS17825	PF03853	YjeF-related protein N-terminus
RG54_RS17830	PF02367	Uncharacterised P-loop hydrolase UPF0079
RG54_RS17835	PF01520	N-acetylmuramoyl-L-alanine amidase
RG54_RS17840	PF01119	DNA mismatch repair protein, C-terminal domain
RG54_RS17840	PF08676	MutL C terminal dimerisation domain
RG54_RS17840	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS17845	PF01715	IPP transferase
RG54_RS17855	PF01926	50S ribosome-binding GTPase
RG54_RS17855	PF13167	RG54_RS17855
RG54_RS17855	PF16360	RG54_RS17855
RG54_RS17860	PF01145	SPFH domain / Band 7 family
RG54_RS17860	PF12221	RG54_RS17860
RG54_RS17865	PF01145	SPFH domain / Band 7 family
RG54_RS17870	PF09838	RG54_RS17870
RG54_RS17875	PF00709	Adenylosuccinate synthetase
RG54_RS17880	PF02082	Transcriptional regulator
RG54_RS17885	PF00575	S1 RNA binding domain
RG54_RS17885	PF00773	RNB domain
RG54_RS17885	PF08206	Ribonuclease B OB domain
RG54_RS17885	PF08461	Ribonuclease R winged-helix domain
RG54_RS17890	PF00588	SpoU rRNA Methylase family
RG54_RS17890	PF08032	RNA 2'-O ribose methyltransferase substrate binding
RG54_RS17895	PF09938	RG54_RS17895
RG54_RS17900	PF04012	RG54_RS17900
RG54_RS17905	PF10679	RG54_RS17905
RG54_RS17910	PF03994	RG54_RS17910
RG54_RS17915	PF06693	RG54_RS17915
RG54_RS17920	PF03738	Glutathionylspermidine synthase preATP-grasp
RG54_RS17925	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
RG54_RS17925	PF02770	Acyl-CoA dehydrogenase, middle domain
RG54_RS17935	PF07338	Protein of unknown function (DUF1471)
RG54_RS17940	PF07338	Protein of unknown function (DUF1471)
RG54_RS17945	PF00326	Prolyl oligopeptidase family
RG54_RS17950	PF00455	RG54_RS17950
RG54_RS17950	PF08220	DeoR-like helix-turn-helix domain
RG54_RS17955	PF13483	Beta-lactamase superfamily domain
RG54_RS17960	PF03611	RG54_RS17960
RG54_RS17965	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
RG54_RS17970	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
RG54_RS17975	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
RG54_RS17980	PF01261	Xylose isomerase-like TIM barrel
RG54_RS17985	PF00596	Class II Aldolase and Adducin N-terminal domain
RG54_RS17990	PF07274	RG54_RS17990
RG54_RS17995	PF07338	Protein of unknown function (DUF1471)
RG54_RS18000	PF01250	Ribosomal protein S6
RG54_RS18005	PF00436	Single-strand binding protein family
RG54_RS18010	PF01084	Ribosomal protein S18
RG54_RS18015	PF01281	Ribosomal protein L9, N-terminal domain
RG54_RS18015	PF03948	Ribosomal protein L9, C-terminal domain
RG54_RS18020	PF03480	Bacterial extracellular solute-binding protein, family 7
RG54_RS18025	PF06808	RG54_RS18025
RG54_RS18030	PF04290	RG54_RS18030
RG54_RS18035	PF00890	FAD binding domain
RG54_RS18040	PF01144	Coenzyme A transferase
RG54_RS18045	PF00378	Enoyl-CoA hydratase/isomerase family
RG54_RS18050	PF01261	Xylose isomerase-like TIM barrel
RG54_RS18055	PF13561	Enoyl-(Acyl carrier protein) reductase
RG54_RS18060	PF00440	Bacterial regulatory proteins, tetR family
RG54_RS18065	PF04225	Opacity-associated protein A LysM-like domain
RG54_RS18065	PF08525	RG54_RS18065
RG54_RS18075	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
RG54_RS18075	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
RG54_RS18080	PF00324	Amino acid permease
RG54_RS18085	PF01814	Hemerythrin HHE cation binding domain
RG54_RS18085	PF04405	RG54_RS18085
RG54_RS18090	PF00892	EamA-like transporter family
RG54_RS18095	PF05368	NmrA-like family
RG54_RS18100	PF01638	HxlR-like helix-turn-helix
RG54_RS18105	PF00149	Calcineurin-like phosphoesterase
RG54_RS18105	PF02872	5'-nucleotidase, C-terminal domain
RG54_RS18110	PF00459	Inositol monophosphatase family
RG54_RS18115	PF09695	RG54_RS18115
RG54_RS18120	PF06526	Protein of unknown function (DUF1107)
RG54_RS18125	PF00571	CBS domain
RG54_RS18125	PF01595	RG54_RS18125
RG54_RS18125	PF03471	Transporter associated domain
RG54_RS18130	PF01625	Peptide methionine sulfoxide reductase
RG54_RS18140	PF01103	Surface antigen
RG54_RS18140	PF07244	Surface antigen variable number repeat
RG54_RS18145	PF04357	RG54_RS18145
RG54_RS18150	PF06094	AIG2-like family
RG54_RS18155	PF04014	Antidote-toxin recognition MazE
RG54_RS18160	PF02452	PemK-like protein
RG54_RS18165	PF00719	Inorganic pyrophosphatase
RG54_RS18170	PF13407	Periplasmic binding protein domain
RG54_RS18175	PF00005	ABC transporter
RG54_RS18180	PF02653	RG54_RS18180
RG54_RS18185	PF02653	RG54_RS18185
RG54_RS18190	PF00316	Fructose-1-6-bisphosphatase
RG54_RS18195	PF01225	Mur ligase family, catalytic domain
RG54_RS18195	PF02875	Mur ligase family, glutamate ligase domain
RG54_RS18195	PF08245	Mur ligase middle domain
RG54_RS18200	PF04751	Protein of unknown function (DUF615)
RG54_RS18205	PF01523	Putative modulator of DNA gyrase
RG54_RS18210	PF07361	Cytochrome b562
RG54_RS18215	PF13353	4Fe-4S single cluster domain
RG54_RS18220	PF12035	RG54_RS18220
RG54_RS18225	PF03477	ATP cone domain
RG54_RS18225	PF13597	Anaerobic ribonucleoside-triphosphate reductase
RG54_RS18230	PF00128	Alpha amylase, catalytic domain
RG54_RS18230	PF11941	Domain of unknown function (DUF3459)
RG54_RS18235	PF00367	phosphotransferase system, EIIB
RG54_RS18235	PF02378	Phosphotransferase system, EIIC
RG54_RS18240	PF00356	Bacterial regulatory proteins, lacI family
RG54_RS18240	PF13377	Periplasmic binding protein-like domain
RG54_RS18245	PF00122	E1-E2 ATPase
RG54_RS18245	PF00689	Cation transporting ATPase, C-terminus
RG54_RS18245	PF00690	Cation transporter/ATPase, N-terminus
RG54_RS18245	PF00702	haloacid dehalogenase-like hydrolase
RG54_RS18250	PF01042	Endoribonuclease L-PSP
RG54_RS18255	PF01948	Aspartate carbamoyltransferase regulatory chain, allosteric domain
RG54_RS18255	PF02748	Aspartate carbamoyltransferase regulatory chain, metal binding domain
RG54_RS18260	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
RG54_RS18260	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
RG54_RS18265	PF08052	RG54_RS18265
RG54_RS18275	PF01042	Endoribonuclease L-PSP
RG54_RS18280	PF13561	Enoyl-(Acyl carrier protein) reductase
RG54_RS18285	PF00440	Bacterial regulatory proteins, tetR family
RG54_RS18290	PF04074	Domain of unknown function (DUF386)
RG54_RS18300	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
RG54_RS18300	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
RG54_RS18305	PF06877	Regulator of ribonuclease activity B
RG54_RS18310	PF00583	Acetyltransferase (GNAT) family
RG54_RS18315	PF05987	RG54_RS18315
RG54_RS18320	PF00133	tRNA synthetases class I (I, L, M and V)
RG54_RS18320	PF08264	Anticodon-binding domain of tRNA
RG54_RS18320	PF10458	Valyl tRNA synthetase tRNA binding arm
RG54_RS18325	PF04364	DNA polymerase III chi subunit, HolC
RG54_RS18330	PF00883	Cytosol aminopeptidase family, catalytic domain
RG54_RS18330	PF02789	Cytosol aminopeptidase family, N-terminal domain
RG54_RS18340	PF03739	RG54_RS18340
RG54_RS18345	PF03739	RG54_RS18345
RG54_RS18350	PF05872	RG54_RS18350
RG54_RS18355	PF00107	Zinc-binding dehydrogenase
RG54_RS18355	PF08240	Alcohol dehydrogenase GroES-like domain
RG54_RS18365	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
RG54_RS18365	PF04851	Type III restriction enzyme, res subunit
RG54_RS18365	PF12008	Type I restriction and modification enzyme - subunit R C terminal
RG54_RS18370	PF01420	Type I restriction modification DNA specificity domain
RG54_RS18375	PF02384	N-6 DNA Methylase
RG54_RS18375	PF12161	HsdM N-terminal domain
RG54_RS18380	PF13708	RG54_RS18380
RG54_RS18390	PF08843	Nucleotidyl transferase of unknown function (DUF1814)
RG54_RS18405	PF01844	HNH endonuclease
RG54_RS18415	PF01344	Kelch motif
RG54_RS18420	PF06178	Oligogalacturonate-specific porin protein (KdgM)
RG54_RS18430	PF00589	Phage integrase family
RG54_RS18435	PF00589	Phage integrase family
RG54_RS18445	PF00419	Fimbrial protein
RG54_RS18450	PF00419	Fimbrial protein
RG54_RS18455	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
RG54_RS18455	PF02753	Pili assembly chaperone PapD, C-terminal domain
RG54_RS18460	PF00577	Outer membrane usher protein
RG54_RS18460	PF13953	PapC C-terminal domain
RG54_RS18460	PF13954	PapC N-terminal domain
RG54_RS18465	PF00419	Fimbrial protein
RG54_RS18475	PF00419	Fimbrial protein
RG54_RS18475	PF09160	FimH, mannose binding
RG54_RS18485	PF02447	RG54_RS18485
RG54_RS18495	PF03786	D-mannonate dehydratase (UxuA)
RG54_RS18500	PF01232	Mannitol dehydrogenase Rossmann domain
RG54_RS18500	PF08125	Mannitol dehydrogenase C-terminal domain
RG54_RS18505	PF15954	RG54_RS18505
RG54_RS18510	PF00392	Bacterial regulatory proteins, gntR family
RG54_RS18510	PF07729	FCD domain
RG54_RS18515	PF10887	RG54_RS18515
RG54_RS18530	PF04965	Gene 25-like lysozyme
RG54_RS18535	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS18535	PF03466	LysR substrate binding domain
RG54_RS18540	PF01979	Amidohydrolase family
RG54_RS18545	PF07670	Nucleoside recognition
RG54_RS18550	PF07670	Nucleoside recognition
RG54_RS18560	PF01885	RNA 2'-phosphotransferase, Tpt1 / KptA family
RG54_RS18565	PF06779	RG54_RS18565
RG54_RS18570	PF06977	SdiA-regulated
RG54_RS18575	PF11823	RG54_RS18575
RG54_RS18580	PF01869	BadF/BadG/BcrA/BcrD ATPase family
RG54_RS18585	PF06050	2-hydroxyglutaryl-CoA dehydratase, D-component
RG54_RS18590	PF04286	RG54_RS18590
RG54_RS18595	PF07690	Major Facilitator Superfamily
RG54_RS18600	PF04754	RG54_RS18600
RG54_RS18605	PF00155	Aminotransferase class I and II
RG54_RS18605	PF00392	Bacterial regulatory proteins, gntR family
RG54_RS18610	PF06568	RG54_RS18610
RG54_RS18615	PF01804	Penicillin amidase
RG54_RS18620	PF02492	CobW/HypB/UreG, nucleotide-binding domain
RG54_RS18620	PF07683	Cobalamin synthesis protein cobW C-terminal domain
RG54_RS18625	PF04328	RG54_RS18625
RG54_RS18630	PF02554	RG54_RS18630
RG54_RS18630	PF13722	RG54_RS18630
RG54_RS18635	PF01613	Flavin reductase like domain
RG54_RS18640	PF03241	4-hydroxyphenylacetate 3-hydroxylase C terminal
RG54_RS18640	PF11794	4-hydroxyphenylacetate 3-hydroxylase N terminal
RG54_RS18645	PF07883	Cupin domain
RG54_RS18645	PF12833	Helix-turn-helix domain
RG54_RS18650	PF07690	Major Facilitator Superfamily
RG54_RS18655	PF03328	HpcH/HpaI aldolase/citrate lyase family
RG54_RS18660	PF01557	Fumarylacetoacetate (FAA) hydrolase family
RG54_RS18665	PF02962	5-carboxymethyl-2-hydroxymuconate isomerase
RG54_RS18670	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
RG54_RS18675	PF00171	Aldehyde dehydrogenase family
RG54_RS18680	PF01557	Fumarylacetoacetate (FAA) hydrolase family
RG54_RS18685	PF01047	MarR family
RG54_RS18690	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
RG54_RS18690	PF00672	HAMP domain
RG54_RS18690	PF02203	Tar ligand binding domain homologue
RG54_RS18695	PF07690	Major Facilitator Superfamily
RG54_RS18700	PF00392	Bacterial regulatory proteins, gntR family
RG54_RS18700	PF07729	FCD domain
RG54_RS18705	PF00107	Zinc-binding dehydrogenase
RG54_RS18705	PF08240	Alcohol dehydrogenase GroES-like domain
RG54_RS18710	PF00884	Sulfatase
RG54_RS18715	PF10696	RG54_RS18715
RG54_RS18720	PF01695	IstB-like ATP binding protein
RG54_RS18730	PF12821	RG54_RS18730
RG54_RS18735	PF06738	RG54_RS18735
RG54_RS18740	PF00196	Bacterial regulatory proteins, luxR family
RG54_RS18745	PF00196	Bacterial regulatory proteins, luxR family
RG54_RS18750	PF06276	Ferric iron reductase FhuF-like transporter
RG54_RS18750	PF11575	RG54_RS18750
RG54_RS18755	PF07256	RG54_RS18755
RG54_RS18780	PF05175	Methyltransferase small domain
RG54_RS18780	PF08468	Methyltransferase small domain N-terminal
RG54_RS18785	PF03603	DNA polymerase III psi subunit
RG54_RS18790	PF00583	Acetyltransferase (GNAT) family
RG54_RS18795	PF13419	Haloacid dehalogenase-like hydrolase
RG54_RS18800	PF00009	Elongation factor Tu GTP binding domain
RG54_RS18800	PF03144	Elongation factor Tu domain 2
RG54_RS18800	PF16658	RG54_RS18800
RG54_RS18805	PF04972	BON domain
RG54_RS18810	PF07043	RG54_RS18810
RG54_RS18815	PF01734	Patatin-like phospholipase
RG54_RS18820	PF01026	TatD related DNase
RG54_RS18825	PF04055	Radical SAM superfamily
RG54_RS18825	PF13353	4Fe-4S single cluster domain
RG54_RS18830	PF11230	RG54_RS18830
RG54_RS18840	PF01791	DeoC/LacD family aldolase
RG54_RS18845	PF00591	Glycosyl transferase family, a/b domain
RG54_RS18845	PF02885	Glycosyl transferase family, helical bundle domain
RG54_RS18845	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
RG54_RS18850	PF01676	Metalloenzyme superfamily
RG54_RS18855	PF01048	Phosphorylase superfamily
RG54_RS18870	PF12710	haloacid dehalogenase-like hydrolase
RG54_RS18875	PF13481	AAA domain
RG54_RS18875	PF13541	Subunit ChlI of Mg-chelatase
RG54_RS18880	PF01381	Helix-turn-helix
RG54_RS18880	PF13521	AAA domain
RG54_RS18890	PF00005	ABC transporter
RG54_RS18890	PF12848	ABC transporter
RG54_RS18900	PF01464	Transglycosylase SLT domain
RG54_RS18900	PF14718	Soluble lytic murein transglycosylase L domain
RG54_RS18905	PF01371	Trp repressor protein
RG54_RS18910	PF01931	Protein of unknown function DUF84
RG54_RS18915	PF00300	Histidine phosphatase superfamily (branch 1)
RG54_RS18920	PF06445	GyrI-like small molecule binding domain
RG54_RS18920	PF12833	Helix-turn-helix domain
RG54_RS18925	PF05981	RG54_RS18925
RG54_RS18930	PF00072	Response regulator receiver domain
RG54_RS18930	PF00486	Transcriptional regulatory protein, C terminal
RG54_RS18935	PF00512	His Kinase A (phospho-acceptor) domain
RG54_RS18935	PF00672	HAMP domain
RG54_RS18935	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS18940	PF06123	RG54_RS18940
RG54_RS18945	PF00072	Response regulator receiver domain
RG54_RS18945	PF00486	Transcriptional regulatory protein, C terminal
RG54_RS18955	PF00588	SpoU rRNA Methylase family
RG54_RS18960	PF08254	RG54_RS18960
RG54_RS18965	PF00696	Amino acid kinase family
RG54_RS18965	PF00742	Homoserine dehydrogenase
RG54_RS18965	PF01842	ACT domain
RG54_RS18965	PF03447	Homoserine dehydrogenase, NAD binding domain
RG54_RS18965	PF13840	ACT domain
RG54_RS18970	PF00288	GHMP kinases N terminal domain
RG54_RS18970	PF08544	GHMP kinases C terminal
RG54_RS18975	PF00291	Pyridoxal-phosphate dependent enzyme
RG54_RS18975	PF14821	Threonine synthase N terminus
RG54_RS18985	PF10697	RG54_RS18985
RG54_RS18990	PF03883	RG54_RS18990
RG54_RS18995	PF01235	RG54_RS18995
RG54_RS19000	PF00923	Transaldolase
RG54_RS19005	PF00994	Probable molybdopterin binding domain
RG54_RS19010	PF01184	RG54_RS19010
RG54_RS19015	PF03981	RG54_RS19015
RG54_RS19015	PF13099	RG54_RS19015
RG54_RS19020	PF10807	RG54_RS19020
RG54_RS19025	PF00012	Hsp70 protein
RG54_RS19030	PF00226	DnaJ domain
RG54_RS19030	PF00684	DnaJ central domain
RG54_RS19030	PF01556	DnaJ C terminal domain
RG54_RS19035	PF01848	RG54_RS19035
RG54_RS19040	PF06965	Na+/H+ antiporter 1
RG54_RS19045	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS19045	PF03466	LysR substrate binding domain
RG54_RS19055	PF00577	Outer membrane usher protein
RG54_RS19055	PF13953	PapC C-terminal domain
RG54_RS19070	PF01649	Ribosomal protein S20
RG54_RS19075	PF10837	RG54_RS19075
RG54_RS19080	PF01687	Riboflavin kinase
RG54_RS19080	PF06574	FAD synthetase
RG54_RS19085	PF00133	tRNA synthetases class I (I, L, M and V)
RG54_RS19085	PF06827	Zinc finger found in FPG and IleRS
RG54_RS19085	PF08264	Anticodon-binding domain of tRNA
RG54_RS19090	PF01252	RG54_RS19090
RG54_RS19095	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
RG54_RS19100	PF02401	LytB protein
RG54_RS19105	PF01156	Inosine-uridine preferring nucleoside hydrolase
RG54_RS19110	PF01113	Dihydrodipicolinate reductase, N-terminus
RG54_RS19110	PF05173	Dihydrodipicolinate reductase, C-terminus
RG54_RS19115	PF00117	Glutamine amidotransferase class-I
RG54_RS19115	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
RG54_RS19120	PF02142	MGS-like domain
RG54_RS19120	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
RG54_RS19120	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
RG54_RS19130	PF07180	Protein of unknown function (DUF1401)
RG54_RS19135	PF00132	Bacterial transferase hexapeptide (six repeats)
RG54_RS19140	PF00378	Enoyl-CoA hydratase/isomerase family
RG54_RS19145	PF00501	AMP-binding enzyme
RG54_RS19145	PF13193	AMP-binding enzyme C-terminal domain
RG54_RS19150	PF02515	CoA-transferase family III
RG54_RS19155	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
RG54_RS19155	PF02770	Acyl-CoA dehydrogenase, middle domain
RG54_RS19155	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
RG54_RS19160	PF02028	BCCT family transporter
RG54_RS19165	PF01012	Electron transfer flavoprotein domain
RG54_RS19170	PF00766	Electron transfer flavoprotein FAD-binding domain
RG54_RS19170	PF01012	Electron transfer flavoprotein domain
RG54_RS19175	PF01494	FAD binding domain
RG54_RS19185	PF00083	Sugar (and other) transporter
RG54_RS19190	PF02525	Flavodoxin-like fold
RG54_RS19195	PF00999	Sodium/hydrogen exchanger family
RG54_RS19195	PF02254	TrkA-N domain
RG54_RS19200	PF00186	Dihydrofolate reductase
RG54_RS19205	PF00149	Calcineurin-like phosphoesterase
RG54_RS19210	PF04379	Protein of unknown function (DUF525)
RG54_RS19215	PF00398	Ribosomal RNA adenine dimethylase
RG54_RS19220	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
RG54_RS19225	PF00639	PPIC-type PPIASE domain
RG54_RS19225	PF09312	SurA N-terminal domain
RG54_RS19225	PF13616	PPIC-type PPIASE domain
RG54_RS19230	PF03968	OstA-like protein
RG54_RS19230	PF04453	Organic solvent tolerance protein
RG54_RS19235	PF00226	DnaJ domain
RG54_RS19235	PF05099	Tellurite resistance protein TerB
RG54_RS19240	PF00849	RNA pseudouridylate synthase
RG54_RS19245	PF00176	SNF2 family N-terminal domain
RG54_RS19245	PF00271	Helicase conserved C-terminal domain
RG54_RS19245	PF12137	RNA polymerase recycling family C-terminal
RG54_RS19250	PF00136	DNA polymerase family B
RG54_RS19250	PF03104	DNA polymerase family B, exonuclease domain
RG54_RS19255	PF00596	Class II Aldolase and Adducin N-terminal domain
RG54_RS19260	PF02610	L-arabinose isomerase
RG54_RS19260	PF11762	L-arabinose isomerase C-terminal domain
RG54_RS19265	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
RG54_RS19275	PF02311	AraC-like ligand binding domain
RG54_RS19275	PF12833	Helix-turn-helix domain
RG54_RS19280	PF09335	RG54_RS19280
RG54_RS19285	PF00005	ABC transporter
RG54_RS19290	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS19295	PF13343	Bacterial extracellular solute-binding protein
RG54_RS19300	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RG54_RS19300	PF12793	RG54_RS19300
RG54_RS19305	PF15894	RG54_RS19305
RG54_RS19310	PF07690	Major Facilitator Superfamily
RG54_RS19315	PF00694	Aconitase C-terminal domain
RG54_RS19320	PF00330	Aconitase family (aconitate hydratase)
RG54_RS19325	PF00180	Isocitrate/isopropylmalate dehydrogenase
RG54_RS19330	PF00682	HMGL-like
RG54_RS19330	PF08502	LeuA allosteric (dimerisation) domain
RG54_RS19335	PF08054	RG54_RS19335
RG54_RS19340	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS19340	PF03466	LysR substrate binding domain
RG54_RS19345	PF00205	Thiamine pyrophosphate enzyme, central domain
RG54_RS19345	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
RG54_RS19345	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
RG54_RS19350	PF10369	Small subunit of acetolactate synthase
RG54_RS19350	PF13710	ACT domain
RG54_RS19360	PF00356	Bacterial regulatory proteins, lacI family
RG54_RS19360	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
RG54_RS19370	PF02381	MraZ protein
RG54_RS19375	PF01795	MraW methylase family
RG54_RS19380	PF04999	RG54_RS19380
RG54_RS19385	PF00905	Penicillin binding protein transpeptidase domain
RG54_RS19385	PF03717	Penicillin-binding Protein dimerisation domain
RG54_RS19390	PF01225	Mur ligase family, catalytic domain
RG54_RS19390	PF02875	Mur ligase family, glutamate ligase domain
RG54_RS19390	PF08245	Mur ligase middle domain
RG54_RS19395	PF01225	Mur ligase family, catalytic domain
RG54_RS19395	PF02875	Mur ligase family, glutamate ligase domain
RG54_RS19395	PF08245	Mur ligase middle domain
RG54_RS19400	PF00953	Glycosyl transferase family 4
RG54_RS19400	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
RG54_RS19405	PF02875	Mur ligase family, glutamate ligase domain
RG54_RS19405	PF08245	Mur ligase middle domain
RG54_RS19410	PF01098	RG54_RS19410
RG54_RS19415	PF03033	Glycosyltransferase family 28 N-terminal domain
RG54_RS19415	PF04101	Glycosyltransferase family 28 C-terminal domain
RG54_RS19420	PF01225	Mur ligase family, catalytic domain
RG54_RS19420	PF02875	Mur ligase family, glutamate ligase domain
RG54_RS19420	PF08245	Mur ligase middle domain
RG54_RS19425	PF01820	D-ala D-ala ligase N-terminus
RG54_RS19425	PF07478	D-ala D-ala ligase C-terminus
RG54_RS19430	PF03799	Cell division protein FtsQ
RG54_RS19430	PF08478	POTRA domain, FtsQ-type
RG54_RS19435	PF02491	SHS2 domain inserted in FTSA
RG54_RS19435	PF14450	Cell division protein FtsA
RG54_RS19440	PF00091	Tubulin/FtsZ family, GTPase domain
RG54_RS19440	PF12327	FtsZ family, C-terminal domain
RG54_RS19445	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
RG54_RS19450	PF06558	RG54_RS19450
RG54_RS19455	PF01043	SecA preprotein cross-linking domain
RG54_RS19455	PF02810	SEC-C motif
RG54_RS19455	PF07516	SecA Wing and Scaffold domain
RG54_RS19455	PF07517	SecA DEAD-like domain
RG54_RS19460	PF00293	NUDIX domain
RG54_RS19465	PF03884	Domain of unknown function (DUF329)
RG54_RS19470	PF07072	Protein of unknown function (DUF1342)
RG54_RS19475	PF01121	Dephospho-CoA kinase
RG54_RS19480	PF00478	IMP dehydrogenase / GMP reductase domain
RG54_RS19485	PF00482	Type II secretion system (T2SS), protein F
RG54_RS19490	PF00437	Type II/IV secretion system protein
RG54_RS19490	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
RG54_RS19495	PF13633	Prokaryotic N-terminal methylation site
RG54_RS19505	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
RG54_RS19505	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
RG54_RS19510	PF01510	N-acetylmuramoyl-L-alanine amidase
RG54_RS19515	PF17113	RG54_RS19515
RG54_RS19520	PF00324	Amino acid permease
RG54_RS19525	PF00392	Bacterial regulatory proteins, gntR family
RG54_RS19525	PF07729	FCD domain
RG54_RS19535	PF00456	Transketolase, thiamine diphosphate binding domain
RG54_RS19540	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
RG54_RS19540	PF00364	Biotin-requiring enzyme
RG54_RS19540	PF02817	e3 binding domain
RG54_RS19545	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
RG54_RS19545	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RG54_RS19550	PF11737	RG54_RS19550
RG54_RS19560	PF00330	Aconitase family (aconitate hydratase)
RG54_RS19560	PF06434	Aconitate hydratase 2 N-terminus
RG54_RS19560	PF11791	Aconitate B N-terminal domain
RG54_RS19565	PF06062	RG54_RS19565
RG54_RS19570	PF02675	S-adenosylmethionine decarboxylase
RG54_RS19575	PF01564	Spermine/spermidine synthase
RG54_RS19580	PF09691	Bacterial chaperone lipoprotein (PulS_OutS)
RG54_RS19585	PF00394	Multicopper oxidase
RG54_RS19585	PF07731	Multicopper oxidase
RG54_RS19585	PF07732	Multicopper oxidase
RG54_RS19590	PF01011	PQQ enzyme repeat
RG54_RS19595	PF00156	Phosphoribosyl transferase domain
RG54_RS19600	PF00484	Carbonic anhydrase
RG54_RS19605	PF00005	ABC transporter
RG54_RS19610	PF01061	RG54_RS19610
RG54_RS19615	PF03610	PTS system fructose IIA component
RG54_RS19620	PF01522	Polysaccharide deacetylase
RG54_RS19625	PF02261	Aspartate decarboxylase
RG54_RS19640	PF04754	RG54_RS19640
RG54_RS19645	PF02569	Pantoate-beta-alanine ligase
RG54_RS19650	PF02548	Ketopantoate hydroxymethyltransferase
RG54_RS19655	PF00419	Fimbrial protein
RG54_RS19660	PF00419	Fimbrial protein
RG54_RS19665	PF00419	Fimbrial protein
RG54_RS19670	PF00419	Fimbrial protein
RG54_RS19675	PF00577	Outer membrane usher protein
RG54_RS19675	PF13953	PapC C-terminal domain
RG54_RS19675	PF13954	PapC N-terminal domain
RG54_RS19680	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
RG54_RS19680	PF02753	Pili assembly chaperone PapD, C-terminal domain
RG54_RS19685	PF00419	Fimbrial protein
RG54_RS19690	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
RG54_RS19695	PF01743	Poly A polymerase head domain
RG54_RS19695	PF12626	Polymerase A arginine-rich C-terminus
RG54_RS19695	PF12627	Probable RNA and SrmB- binding site of polymerase A
RG54_RS19700	PF00749	tRNA synthetases class I (E and Q), catalytic domain
RG54_RS19705	PF01258	Prokaryotic dksA/traR C4-type zinc finger
RG54_RS19710	PF03749	Sugar fermentation stimulation protein
RG54_RS19715	PF02834	LigT like Phosphoesterase
RG54_RS19720	PF00270	DEAD/DEAH box helicase
RG54_RS19720	PF00271	Helicase conserved C-terminal domain
RG54_RS19720	PF04408	Helicase associated domain (HA2)
RG54_RS19720	PF08482	RG54_RS19720
RG54_RS19730	PF00905	Penicillin binding protein transpeptidase domain
RG54_RS19730	PF00912	Transglycosylase
RG54_RS19730	PF14812	RG54_RS19730
RG54_RS19730	PF14814	Bifunctional transglycosylase second domain
RG54_RS19735	PF00593	TonB dependent receptor
RG54_RS19735	PF07715	TonB-dependent Receptor Plug Domain
RG54_RS19740	PF00005	ABC transporter
RG54_RS19745	PF01497	Periplasmic binding protein
RG54_RS19755	PF00202	Aminotransferase class-III
RG54_RS19760	PF00654	Voltage gated chloride channel
RG54_RS19765	PF01521	Iron-sulphur cluster biosynthesis
RG54_RS19770	PF03458	RG54_RS19770
RG54_RS19775	PF01497	Periplasmic binding protein
RG54_RS19780	PF01048	Phosphorylase superfamily
RG54_RS19785	PF01966	HD domain
RG54_RS19795	PF00595	PDZ domain (Also known as DHR or GLGF)
RG54_RS19795	PF13365	Trypsin-like peptidase domain
RG54_RS19800	PF05651	RG54_RS19800
RG54_RS19800	PF13556	PucR C-terminal helix-turn-helix domain
RG54_RS19805	PF11944	RG54_RS19805
RG54_RS19810	PF00132	Bacterial transferase hexapeptide (six repeats)
RG54_RS19810	PF14602	Hexapeptide repeat of succinyl-transferase
RG54_RS19810	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
RG54_RS19815	PF01842	ACT domain
RG54_RS19815	PF01909	Nucleotidyltransferase domain
RG54_RS19815	PF01966	HD domain
RG54_RS19815	PF08335	GlnD PII-uridylyltransferase
RG54_RS19820	PF00557	Metallopeptidase family M24
RG54_RS19830	PF00318	Ribosomal protein S2
RG54_RS19840	PF00889	Elongation factor TS
RG54_RS19845	PF00696	Amino acid kinase family
RG54_RS19850	PF01765	Ribosome recycling factor
RG54_RS19855	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
RG54_RS19855	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
RG54_RS19855	PF13288	DXP reductoisomerase C-terminal domain
RG54_RS19860	PF01255	Putative undecaprenyl diphosphate synthase
RG54_RS19865	PF01148	Cytidylyltransferase family
RG54_RS19870	PF00595	PDZ domain (Also known as DHR or GLGF)
RG54_RS19870	PF02163	Peptidase family M50
RG54_RS19875	PF01103	Surface antigen
RG54_RS19875	PF07244	Surface antigen variable number repeat
RG54_RS19880	PF03938	Outer membrane protein (OmpH-like)
RG54_RS19885	PF00132	Bacterial transferase hexapeptide (six repeats)
RG54_RS19885	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD
RG54_RS19885	PF14602	Hexapeptide repeat of succinyl-transferase
RG54_RS19890	PF07977	FabA-like domain
RG54_RS19895	PF00132	Bacterial transferase hexapeptide (six repeats)
RG54_RS19895	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
RG54_RS19900	PF02684	RG54_RS19900
RG54_RS19905	PF01351	Ribonuclease HII
RG54_RS19910	PF01336	OB-fold nucleic acid binding domain
RG54_RS19910	PF02811	PHP domain
RG54_RS19910	PF07733	Bacterial DNA polymerase III alpha subunit
RG54_RS19910	PF14579	Helix-hairpin-helix motif
RG54_RS19915	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
RG54_RS19920	PF01276	Orn/Lys/Arg decarboxylase, major domain
RG54_RS19920	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
RG54_RS19920	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
RG54_RS19925	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
RG54_RS19930	PF01171	PP-loop family
RG54_RS19930	PF09179	TilS substrate binding domain
RG54_RS19930	PF11734	TilS substrate C-terminal domain
RG54_RS19935	PF07073	Modulator of Rho-dependent transcription termination (ROF)
RG54_RS19940	PF06786	RG54_RS19940
RG54_RS19945	PF07152	YaeQ protein
RG54_RS19950	PF00472	RF-1 domain
RG54_RS19955	PF04170	NlpE N-terminal domain
RG54_RS19955	PF17185	RG54_RS19955
RG54_RS19965	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
RG54_RS19965	PF03129	Anticodon binding domain
RG54_RS19965	PF04073	Aminoacyl-tRNA editing domain
RG54_RS19970	PF01980	Uncharacterised protein family UPF0066
RG54_RS19975	PF16358	RG54_RS19975
RG54_RS19980	PF03180	NLPA lipoprotein
RG54_RS19985	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS19990	PF00005	ABC transporter
RG54_RS19990	PF09383	NIL domain
RG54_RS19995	PF13242	HAD-hyrolase-like
RG54_RS20030	PF13356	Domain of unknown function (DUF4102)
RG54_RS20040	PF13518	Helix-turn-helix domain
RG54_RS20045	PF00589	Phage integrase family
RG54_RS20055	PF12835	Integrase
RG54_RS20060	PF12834	RG54_RS20060
RG54_RS20070	PF01381	Helix-turn-helix
RG54_RS20075	PF06812	RG54_RS20075
RG54_RS20080	PF06996	RG54_RS20080
RG54_RS20085	PF05947	RG54_RS20085
RG54_RS20090	PF04965	Gene 25-like lysozyme
RG54_RS20095	PF07024	ImpE protein
RG54_RS20105	PF00004	ATPase family associated with various cellular activities (AAA)
RG54_RS20105	PF07724	AAA domain (Cdc48 subfamily)
RG54_RS20105	PF10431	C-terminal, D2-small domain, of ClpB protein
RG54_RS20120	PF05591	RG54_RS20120
RG54_RS20125	PF05943	RG54_RS20125
RG54_RS20130	PF14113	Domain of unknown function (DUF4285)
RG54_RS20135	PF16695	RG54_RS20135
RG54_RS20140	PF05638	Protein of unknown function (DUF796)
RG54_RS20145	PF12790	Type VI secretion lipoprotein
RG54_RS20150	PF05936	RG54_RS20150
RG54_RS20155	PF00691	OmpA family
RG54_RS20155	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
RG54_RS20175	PF06744	RG54_RS20175
RG54_RS20175	PF06761	RG54_RS20175
RG54_RS20175	PF14331	RG54_RS20175
RG54_RS20180	PF09867	Uncharacterized protein conserved in bacteria (DUF2094)
RG54_RS20195	PF05954	Phage late control gene D protein (GPD)
RG54_RS20200	PF08786	Domain of unknown function (DUF1795)
RG54_RS20205	PF05488	PAAR motif
RG54_RS20205	PF05593	RG54_RS20205
RG54_RS20215	PF05593	RG54_RS20215
RG54_RS20220	PF01609	Transposase DDE domain
RG54_RS20220	PF13808	RG54_RS20220
RG54_RS20230	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS20230	PF03466	LysR substrate binding domain
RG54_RS20235	PF03372	Endonuclease/Exonuclease/phosphatase family
RG54_RS20240	PF08241	Methyltransferase domain
RG54_RS20245	PF01464	Transglycosylase SLT domain
RG54_RS20245	PF01476	LysM domain
RG54_RS20250	PF00753	Metallo-beta-lactamase superfamily
RG54_RS20250	PF16123	RG54_RS20250
RG54_RS20255	PF08241	Methyltransferase domain
RG54_RS20260	PF00075	RNase H
RG54_RS20265	PF00929	Exonuclease
RG54_RS20275	PF00795	Carbon-nitrogen hydrolase
RG54_RS20280	PF08816	Inhibitor of vertebrate lysozyme (Ivy)
RG54_RS20285	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
RG54_RS20285	PF02770	Acyl-CoA dehydrogenase, middle domain
RG54_RS20285	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
RG54_RS20285	PF09317	RG54_RS20285
RG54_RS20290	PF13580	SIS domain
RG54_RS20295	PF13230	Glutamine amidotransferases class-II
RG54_RS20300	PF03734	L,D-transpeptidase catalytic domain
RG54_RS20305	PF15738	RG54_RS20305
RG54_RS20310	PF04221	RelB antitoxin
RG54_RS20315	PF00877	NlpC/P60 family
RG54_RS20320	PF05534	RG54_RS20320
RG54_RS20325	PF07927	YcfA-like protein
RG54_RS20330	PF00771	FHIPEP family
RG54_RS20335	PF01312	FlhB HrpN YscU SpaS Family
RG54_RS20340	PF01311	RG54_RS20340
RG54_RS20345	PF01313	RG54_RS20345
RG54_RS20350	PF00813	RG54_RS20350
RG54_RS20355	PF01052	Surface presentation of antigens (SPOA)
RG54_RS20360	PF01052	Surface presentation of antigens (SPOA)
RG54_RS20365	PF00158	Sigma-54 interaction domain
RG54_RS20365	PF02954	Bacterial regulatory protein, Fis family
RG54_RS20370	PF02049	RG54_RS20370
RG54_RS20375	PF01514	Secretory protein of YscJ/FliF family
RG54_RS20375	PF08345	RG54_RS20375
RG54_RS20380	PF01706	FliG C-terminal domain
RG54_RS20380	PF14841	FliG middle domain
RG54_RS20380	PF14842	FliG N-terminal domain
RG54_RS20385	PF02108	RG54_RS20385
RG54_RS20390	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
RG54_RS20395	PF02050	Flagellar FliJ protein
RG54_RS20400	PF01467	Cytidylyltransferase
RG54_RS20405	PF00535	Glycosyl transferase family 2
RG54_RS20415	PF05130	FlgN protein
RG54_RS20420	PF04316	Anti-sigma-28 factor, FlgM
RG54_RS20425	PF13144	SAF-like
RG54_RS20435	PF00460	Flagella basal body rod protein
RG54_RS20435	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
RG54_RS20440	PF03963	RG54_RS20440
RG54_RS20440	PF13861	FlgD Tudor-like domain
RG54_RS20445	PF00460	Flagella basal body rod protein
RG54_RS20445	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
RG54_RS20445	PF07559	Flagellar basal body protein FlaE
RG54_RS20450	PF00460	Flagella basal body rod protein
RG54_RS20450	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
RG54_RS20455	PF00460	Flagella basal body rod protein
RG54_RS20455	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
RG54_RS20460	PF02107	RG54_RS20460
RG54_RS20465	PF02119	RG54_RS20465
RG54_RS20470	PF10135	RG54_RS20470
RG54_RS20475	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
RG54_RS20480	PF00669	Bacterial flagellin N-terminal helical region
RG54_RS20490	PF13693	Winged helix-turn-helix DNA-binding
RG54_RS20495	PF00665	Integrase core domain
RG54_RS20495	PF02316	Mu DNA-binding domain
RG54_RS20495	PF09299	Mu transposase, C-terminal
RG54_RS20500	PF09077	Mu B transposition protein, C terminal
RG54_RS20500	PF13401	AAA domain
RG54_RS20520	PF07352	Bacteriophage Mu Gam like protein
RG54_RS20555	PF06252	RG54_RS20555
RG54_RS20570	PF08765	Mor transcription activator family
RG54_RS20575	PF00959	Phage lysozyme
RG54_RS20585	PF01258	Prokaryotic dksA/traR C4-type zinc finger
RG54_RS20590	PF10805	RG54_RS20590
RG54_RS20600	PF11985	RG54_RS20600
RG54_RS20610	PF03237	Terminase-like family
RG54_RS20615	PF06074	RG54_RS20615
RG54_RS20620	PF04233	RG54_RS20620
RG54_RS20625	PF05069	RG54_RS20625
RG54_RS20630	PF10123	RG54_RS20630
RG54_RS20635	PF10124	RG54_RS20635
RG54_RS20645	PF07030	RG54_RS20645
RG54_RS20650	PF08873	RG54_RS20650
RG54_RS20660	PF10948	RG54_RS20660
RG54_RS20665	PF04984	Phage tail sheath protein
RG54_RS20670	PF10618	RG54_RS20670
RG54_RS20675	PF10109	RG54_RS20675
RG54_RS20685	PF07157	RG54_RS20685
RG54_RS20690	PF05954	Phage late control gene D protein (GPD)
RG54_RS20695	PF06890	Bacteriophage Mu Gp45 protein
RG54_RS20700	PF07409	RG54_RS20700
RG54_RS20705	PF04865	RG54_RS20705
RG54_RS20710	PF10076	RG54_RS20710
RG54_RS20720	PF02413	RG54_RS20720
RG54_RS20730	PF07125	RG54_RS20730
RG54_RS20735	PF05696	RG54_RS20735
RG54_RS20745	PF10122	RG54_RS20745
RG54_RS20755	PF00700	Bacterial flagellin C-terminal helical region
RG54_RS20770	PF00669	Bacterial flagellin N-terminal helical region
RG54_RS20770	PF00700	Bacterial flagellin C-terminal helical region
RG54_RS20780	PF02465	RG54_RS20780
RG54_RS20780	PF07195	RG54_RS20780
RG54_RS20785	PF02561	Flagellar protein FliS
RG54_RS20795	PF02120	Flagellar hook-length control protein FliK
RG54_RS20800	PF03748	RG54_RS20800
RG54_RS20805	PF04542	Sigma-70 region 2
RG54_RS20805	PF04545	Sigma-70, region 4
RG54_RS20810	PF01618	RG54_RS20810
RG54_RS20815	PF00691	OmpA family
RG54_RS20815	PF13677	RG54_RS20815
RG54_RS20820	PF00817	impB/mucB/samB family
RG54_RS20820	PF11798	IMS family HHH motif
RG54_RS20820	PF11799	impB/mucB/samB family C-terminal domain
RG54_RS20825	PF13673	Acetyltransferase (GNAT) domain
RG54_RS20835	PF01139	tRNA-splicing ligase RtcB
RG54_RS20840	PF00472	RF-1 domain
RG54_RS20845	PF04307	RG54_RS20845
RG54_RS20855	PF01546	Peptidase family M20/M25/M40
RG54_RS20855	PF07687	Peptidase dimerisation domain
RG54_RS20860	PF00156	Phosphoribosyl transferase domain
RG54_RS20865	PF06500	Alpha/beta hydrolase of unknown function (DUF1100)
RG54_RS20870	PF07417	Transcriptional regulator Crl
RG54_RS20875	PF00267	Gram-negative porin
RG54_RS20880	PF00696	Amino acid kinase family
RG54_RS20880	PF01472	PUA domain
RG54_RS20885	PF00171	Aldehyde dehydrogenase family
RG54_RS20905	PF10088	RG54_RS20905
RG54_RS20910	PF01381	Helix-turn-helix
RG54_RS20930	PF04610	RG54_RS20930
RG54_RS20940	PF02028	BCCT family transporter
RG54_RS20950	PF10011	Predicted membrane protein (DUF2254)
RG54_RS20975	PF00589	Phage integrase family
RG54_RS20980	PF03466	LysR substrate binding domain
RG54_RS20985	PF02625	XdhC and CoxI family
RG54_RS20985	PF13478	XdhC Rossmann domain
RG54_RS20990	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
RG54_RS20990	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
RG54_RS20995	PF00941	FAD binding domain in molybdopterin dehydrogenase
RG54_RS20995	PF03450	CO dehydrogenase flavoprotein C-terminal domain
RG54_RS21000	PF00111	2Fe-2S iron-sulfur cluster binding domain
RG54_RS21000	PF01799	[2Fe-2S] binding domain
RG54_RS21010	PF07274	RG54_RS21010
RG54_RS21020	PF03692	RG54_RS21020
RG54_RS21035	PF15976	RG54_RS21035
RG54_RS21035	PF16967	RG54_RS21035
RG54_RS21045	PF16449	RG54_RS21045
RG54_RS21050	PF00196	Bacterial regulatory proteins, luxR family
RG54_RS21065	PF00444	Ribosomal protein L36
RG54_RS21070	PF01197	Ribosomal protein L31
RG54_RS21085	PF02369	Bacterial Ig-like domain (group 1)
RG54_RS21085	PF09134	Invasin, domain 3
RG54_RS21085	PF11924	Protein of unknown function (DUF3442)
RG54_RS21090	PF06445	GyrI-like small molecule binding domain
RG54_RS21090	PF12833	Helix-turn-helix domain
RG54_RS21095	PF04224	RG54_RS21095
RG54_RS21100	PF07338	Protein of unknown function (DUF1471)
RG54_RS21105	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
RG54_RS21105	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RG54_RS21110	PF12833	Helix-turn-helix domain
RG54_RS21110	PF12852	Cupin
RG54_RS21115	PF02754	RG54_RS21115
RG54_RS21120	PF02589	Uncharacterised ACR, YkgG family COG1556
RG54_RS21120	PF11870	RG54_RS21120
RG54_RS21120	PF13183	4Fe-4S dicluster domain
RG54_RS21125	PF02589	Uncharacterised ACR, YkgG family COG1556
RG54_RS21145	PF00732	GMC oxidoreductase
RG54_RS21145	PF05199	GMC oxidoreductase
RG54_RS21150	PF00171	Aldehyde dehydrogenase family
RG54_RS21155	PF00440	Bacterial regulatory proteins, tetR family
RG54_RS21155	PF13977	Bacterial transcriptional repressor
RG54_RS21165	PF02028	BCCT family transporter
RG54_RS21175	PF00196	Bacterial regulatory proteins, luxR family
RG54_RS21175	PF00563	EAL domain
RG54_RS21180	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS21180	PF03466	LysR substrate binding domain
RG54_RS21185	PF06496	RG54_RS21185
RG54_RS21195	PF12796	Ankyrin repeats (3 copies)
RG54_RS21195	PF13637	Ankyrin repeats (many copies)
RG54_RS21200	PF11392	RG54_RS21200
RG54_RS21205	PF00549	CoA-ligase
RG54_RS21205	PF02629	CoA binding domain
RG54_RS21210	PF06545	Protein of unknown function (DUF1116)
RG54_RS21215	PF00696	Amino acid kinase family
RG54_RS21220	PF07969	Amidohydrolase family
RG54_RS21225	PF04266	ASCH domain
RG54_RS21230	PF13407	Periplasmic binding protein domain
RG54_RS21235	PF00005	ABC transporter
RG54_RS21240	PF02653	RG54_RS21240
RG54_RS21245	PF02653	RG54_RS21245
RG54_RS21250	PF00107	Zinc-binding dehydrogenase
RG54_RS21250	PF08240	Alcohol dehydrogenase GroES-like domain
RG54_RS21265	PF01810	RG54_RS21265
RG54_RS21270	PF07338	Protein of unknown function (DUF1471)
RG54_RS21275	PF00158	Sigma-54 interaction domain
RG54_RS21275	PF02954	Bacterial regulatory protein, Fis family
RG54_RS21275	PF06506	Propionate catabolism activator
RG54_RS21280	PF13714	Phosphoenolpyruvate phosphomutase
RG54_RS21285	PF00285	Citrate synthase
RG54_RS21290	PF03972	MmgE/PrpD family
RG54_RS21295	PF00501	AMP-binding enzyme
RG54_RS21295	PF13193	AMP-binding enzyme C-terminal domain
RG54_RS21295	PF16177	RG54_RS21295
RG54_RS21300	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
RG54_RS21305	PF07969	Amidohydrolase family
RG54_RS21310	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS21310	PF03466	LysR substrate binding domain
RG54_RS21315	PF00484	Carbonic anhydrase
RG54_RS21320	PF02560	Cyanate lyase C-terminal domain
RG54_RS21325	PF07690	Major Facilitator Superfamily
RG54_RS21330	PF01306	LacY proton/sugar symporter
RG54_RS21335	PF00703	Glycosyl hydrolases family 2
RG54_RS21335	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
RG54_RS21335	PF02837	Glycosyl hydrolases family 2, sugar binding domain
RG54_RS21335	PF02929	Beta galactosidase small chain
RG54_RS21335	PF16353	RG54_RS21335
RG54_RS21345	PF00356	Bacterial regulatory proteins, lacI family
RG54_RS21345	PF13377	Periplasmic binding protein-like domain
RG54_RS21350	PF01614	Bacterial transcriptional regulator
RG54_RS21350	PF09339	IclR helix-turn-helix domain
RG54_RS21355	PF01494	FAD binding domain
RG54_RS21360	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
RG54_RS21365	PF00561	alpha/beta hydrolase fold
RG54_RS21370	PF01557	Fumarylacetoacetate (FAA) hydrolase family
RG54_RS21375	PF01118	Semialdehyde dehydrogenase, NAD binding domain
RG54_RS21375	PF09290	Prokaryotic acetaldehyde dehydrogenase, dimerisation
RG54_RS21380	PF00682	HMGL-like
RG54_RS21380	PF07836	DmpG-like communication domain
RG54_RS21390	PF07690	Major Facilitator Superfamily
RG54_RS21395	PF09831	RG54_RS21395
RG54_RS21400	PF12035	RG54_RS21400
RG54_RS21405	PF00756	Putative esterase
RG54_RS21410	PF00107	Zinc-binding dehydrogenase
RG54_RS21410	PF08240	Alcohol dehydrogenase GroES-like domain
RG54_RS21415	PF02583	Metal-sensitive transcriptional repressor
RG54_RS21425	PF00132	Bacterial transferase hexapeptide (six repeats)
RG54_RS21430	PF00535	Glycosyl transferase family 2
RG54_RS21435	PF02585	GlcNAc-PI de-N-acetylase
RG54_RS21445	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
RG54_RS21450	PF00005	ABC transporter
RG54_RS21455	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS21460	PF02668	Taurine catabolism dioxygenase TauD, TfdA family
RG54_RS21465	PF00490	Delta-aminolevulinic acid dehydratase
RG54_RS21475	PF03797	Autotransporter beta-domain
RG54_RS21480	PF15977	RG54_RS21480
RG54_RS21485	PF00144	Beta-lactamase
RG54_RS21495	PF05992	RG54_RS21495
RG54_RS21500	PF07759	RG54_RS21500
RG54_RS21505	PF10954	RG54_RS21505
RG54_RS21510	PF10953	RG54_RS21510
RG54_RS21515	PF01820	D-ala D-ala ligase N-terminus
RG54_RS21515	PF07478	D-ala D-ala ligase C-terminus
RG54_RS21525	PF10796	RG54_RS21525
RG54_RS21530	PF00245	Alkaline phosphatase
RG54_RS21535	PF07769	RG54_RS21535
RG54_RS21540	PF00990	GGDEF domain
RG54_RS21540	PF05230	RG54_RS21540
RG54_RS21545	PF03807	NADP oxidoreductase coenzyme F420-dependent
RG54_RS21545	PF14748	Pyrroline-5-carboxylate reductase dimerisation
RG54_RS21550	PF02639	RG54_RS21550
RG54_RS21555	PF01202	Shikimate kinase
RG54_RS21560	PF16362	RG54_RS21560
RG54_RS21570	PF07302	RG54_RS21570
RG54_RS21575	PF06865	Protein of unknown function (DUF1255)
RG54_RS21585	PF10971	RG54_RS21585
RG54_RS21590	PF04381	Putative exonuclease, RdgC
RG54_RS21595	PF00480	ROK family
RG54_RS21600	PF07690	Major Facilitator Superfamily
RG54_RS21605	PF13476	AAA domain
RG54_RS21605	PF13558	Putative exonuclease SbcCD, C subunit
RG54_RS21610	PF00149	Calcineurin-like phosphoesterase
RG54_RS21610	PF12320	Type 5 capsule protein repressor C-terminal domain
RG54_RS21615	PF00072	Response regulator receiver domain
RG54_RS21615	PF00486	Transcriptional regulatory protein, C terminal
RG54_RS21620	PF00512	His Kinase A (phospho-acceptor) domain
RG54_RS21620	PF00989	PAS fold
RG54_RS21620	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS21620	PF11808	RG54_RS21620
RG54_RS21625	PF05525	RG54_RS21625
RG54_RS21630	PF00324	Amino acid permease
RG54_RS21635	PF00128	Alpha amylase, catalytic domain
RG54_RS21635	PF02903	Alpha amylase, N-terminal ig-like domain
RG54_RS21640	PF04336	RG54_RS21640
RG54_RS21645	PF02547	Queuosine biosynthesis protein
RG54_RS21650	PF01702	Queuine tRNA-ribosyltransferase
RG54_RS21655	PF02699	Preprotein translocase subunit
RG54_RS21660	PF02355	Protein export membrane protein
RG54_RS21660	PF07549	SecD/SecF GG Motif
RG54_RS21660	PF13721	SecD export protein N-terminal TM region
RG54_RS21665	PF02355	Protein export membrane protein
RG54_RS21665	PF07549	SecD/SecF GG Motif
RG54_RS21670	PF01844	HNH endonuclease
RG54_RS21675	PF03502	Nucleoside-specific channel-forming protein, Tsx
RG54_RS21680	PF11622	Protein of unknown function (DUF3251)
RG54_RS21685	PF03477	ATP cone domain
RG54_RS21690	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
RG54_RS21690	PF01872	RibD C-terminal domain
RG54_RS21695	PF00885	6,7-dimethyl-8-ribityllumazine synthase
RG54_RS21700	PF01029	NusB family
RG54_RS21705	PF00586	AIR synthase related protein, N-terminal domain
RG54_RS21705	PF02769	AIR synthase related protein, C-terminal domain
RG54_RS21710	PF04608	Phosphatidylglycerophosphatase A
RG54_RS21715	PF00248	Aldo/keto reductase family
RG54_RS21720	PF02779	Transketolase, pyrimidine binding domain
RG54_RS21720	PF02780	Transketolase, C-terminal domain
RG54_RS21720	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
RG54_RS21725	PF00348	Polyprenyl synthetase
RG54_RS21730	PF02609	Exonuclease VII small subunit
RG54_RS21735	PF02568	Thiamine biosynthesis protein (ThiI)
RG54_RS21735	PF02926	THUMP domain
RG54_RS21740	PF01965	DJ-1/PfpI family
RG54_RS21745	PF02558	Ketopantoate reductase PanE/ApbA
RG54_RS21745	PF08546	Ketopantoate reductase PanE/ApbA C terminal
RG54_RS21750	PF04461	Protein of unknown function (DUF520)
RG54_RS21755	PF07690	Major Facilitator Superfamily
RG54_RS21760	PF01040	UbiA prenyltransferase family
RG54_RS21765	PF03626	RG54_RS21765
RG54_RS21770	PF00510	Cytochrome c oxidase subunit III
RG54_RS21775	PF00115	Cytochrome C and Quinol oxidase polypeptide I
RG54_RS21780	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
RG54_RS21780	PF06481	COX Aromatic Rich Motif
RG54_RS21785	PF07690	Major Facilitator Superfamily
RG54_RS21790	PF03923	RG54_RS21790
RG54_RS21790	PF08139	RG54_RS21790
RG54_RS21795	PF01722	BolA-like protein
RG54_RS21805	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
RG54_RS21805	PF05697	Bacterial trigger factor protein (TF)
RG54_RS21805	PF05698	Bacterial trigger factor protein (TF) C-terminus
RG54_RS21810	PF00574	Clp protease
RG54_RS21815	PF06689	ClpX C4-type zinc finger
RG54_RS21815	PF07724	AAA domain (Cdc48 subfamily)
RG54_RS21815	PF10431	C-terminal, D2-small domain, of ClpB protein
RG54_RS21820	PF00004	ATPase family associated with various cellular activities (AAA)
RG54_RS21820	PF02190	ATP-dependent protease La (LON) domain
RG54_RS21820	PF05362	Lon protease (S16) C-terminal proteolytic domain
RG54_RS21825	PF00216	Bacterial DNA-binding protein
RG54_RS21830	PF13145	PPIC-type PPIASE domain
RG54_RS21830	PF13624	SurA N-terminal domain
RG54_RS21835	PF12836	Helix-hairpin-helix motif
RG54_RS21840	PF13279	Thioesterase-like superfamily
RG54_RS21845	PF06508	Queuosine biosynthesis protein QueC
RG54_RS21850	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RG54_RS21850	PF12793	RG54_RS21850
RG54_RS21855	PF08282	haloacid dehalogenase-like hydrolase
RG54_RS21860	PF01037	AsnC family
RG54_RS21860	PF13404	AsnC-type helix-turn-helix domain
RG54_RS21865	PF00005	ABC transporter
RG54_RS21865	PF00664	ABC transporter transmembrane region
RG54_RS21870	PF00005	ABC transporter
RG54_RS21870	PF00664	ABC transporter transmembrane region
RG54_RS21875	PF00543	Nitrogen regulatory protein P-II
RG54_RS21880	PF00909	Ammonium Transporter Family
RG54_RS21885	PF13622	Thioesterase-like superfamily
RG54_RS21890	PF09619	Type III secretion system lipoprotein chaperone (YscW)
RG54_RS21895	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
RG54_RS21905	PF07237	Protein of unknown function (DUF1428)
RG54_RS21910	PF00563	EAL domain
RG54_RS21910	PF12792	RG54_RS21910
RG54_RS21915	PF10777	RG54_RS21915
RG54_RS21920	PF12464	Maltose acetyltransferase
RG54_RS21920	PF14602	Hexapeptide repeat of succinyl-transferase
RG54_RS21925	PF05321	Haemolysin expression modulating protein
RG54_RS21930	PF10757	RG54_RS21930
RG54_RS21935	PF00873	AcrB/AcrD/AcrF family
RG54_RS21940	PF00529	HlyD family secretion protein
RG54_RS21940	PF16576	RG54_RS21940
RG54_RS21945	PF00440	Bacterial regulatory proteins, tetR family
RG54_RS21945	PF08361	MAATS-type transcriptional repressor, C-terminal region
RG54_RS21955	PF00924	Mechanosensitive ion channel
RG54_RS21955	PF12794	RG54_RS21955
RG54_RS21955	PF12795	RG54_RS21955
RG54_RS21965	PF10689	RG54_RS21965
RG54_RS21970	PF07445	Primosomal replication protein priB and priC
RG54_RS21975	PF04304	RG54_RS21975
RG54_RS21985	PF00156	Phosphoribosyl transferase domain
RG54_RS21990	PF12168	RG54_RS21990
RG54_RS21990	PF12169	DNA polymerase III subunits gamma and tau domain III
RG54_RS21990	PF12170	DNA polymerase III tau subunit V interacting with alpha
RG54_RS21990	PF13177	DNA polymerase III, delta subunit
RG54_RS21995	PF02575	YbaB/EbfC DNA-binding family
RG54_RS22000	PF02132	RecR protein
RG54_RS22000	PF13662	Toprim domain
RG54_RS22005	PF00183	Hsp90 protein
RG54_RS22005	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS22010	PF00406	Adenylate kinase
RG54_RS22010	PF05191	Adenylate kinase, active site lid
RG54_RS22015	PF00762	Ferrochelatase
RG54_RS22020	PF07859	alpha/beta hydrolase fold
RG54_RS22025	PF00294	pfkB family carbohydrate kinase
RG54_RS22030	PF00999	Sodium/hydrogen exchanger family
RG54_RS22030	PF02254	TrkA-N domain
RG54_RS22035	PF07690	Major Facilitator Superfamily
RG54_RS22045	PF00149	Calcineurin-like phosphoesterase
RG54_RS22045	PF02872	5'-nucleotidase, C-terminal domain
RG54_RS22050	PF04073	Aminoacyl-tRNA editing domain
RG54_RS22055	PF01963	RG54_RS22055
RG54_RS22060	PF01381	Helix-turn-helix
RG54_RS22070	PF12035	RG54_RS22070
RG54_RS22075	PF00122	E1-E2 ATPase
RG54_RS22075	PF00403	Heavy-metal-associated domain
RG54_RS22075	PF00702	haloacid dehalogenase-like hydrolase
RG54_RS22080	PF04960	Glutaminase
RG54_RS22085	PF13520	Amino acid permease
RG54_RS22090	PF13411	MerR HTH family regulatory protein
RG54_RS22095	PF01957	NfeD-like C-terminal, partner-binding
RG54_RS22100	PF01145	SPFH domain / Band 7 family
RG54_RS22100	PF16200	RG54_RS22100
RG54_RS22105	PF00005	ABC transporter
RG54_RS22110	PF03649	RG54_RS22110
RG54_RS22115	PF00085	Thioredoxin
RG54_RS22115	PF14559	Tetratricopeptide repeat
RG54_RS22115	PF14561	Tetratricopeptide repeat
RG54_RS22120	PF00106	short chain dehydrogenase
RG54_RS22125	PF13472	GDSL-like Lipase/Acylhydrolase family
RG54_RS22130	PF00005	ABC transporter
RG54_RS22135	PF02687	RG54_RS22135
RG54_RS22150	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS22150	PF03466	LysR substrate binding domain
RG54_RS22155	PF04115	Ureidoglycolate hydrolase
RG54_RS22160	PF01614	Bacterial transcriptional regulator
RG54_RS22160	PF09339	IclR helix-turn-helix domain
RG54_RS22165	PF00205	Thiamine pyrophosphate enzyme, central domain
RG54_RS22165	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
RG54_RS22165	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
RG54_RS22170	PF01261	Xylose isomerase-like TIM barrel
RG54_RS22175	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
RG54_RS22175	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
RG54_RS22180	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
RG54_RS22185	PF01979	Amidohydrolase family
RG54_RS22190	PF00860	Permease family
RG54_RS22195	PF02595	Glycerate kinase family
RG54_RS22200	PF05899	Protein of unknown function (DUF861)
RG54_RS22200	PF07883	Cupin domain
RG54_RS22205	PF01546	Peptidase family M20/M25/M40
RG54_RS22210	PF02615	Malate/L-lactate dehydrogenase
RG54_RS22215	PF00549	CoA-ligase
RG54_RS22215	PF02629	CoA binding domain
RG54_RS22220	PF06545	Protein of unknown function (DUF1116)
RG54_RS22225	PF11392	RG54_RS22225
RG54_RS22230	PF00696	Amino acid kinase family
RG54_RS22235	PF02222	ATP-grasp domain
RG54_RS22240	PF00731	AIR carboxylase
RG54_RS22250	PF12850	Calcineurin-like phosphoesterase superfamily domain
RG54_RS22255	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
RG54_RS22260	PF01406	tRNA synthetases class I (C) catalytic domain
RG54_RS22260	PF09190	DALR domain
RG54_RS22265	PF04307	RG54_RS22265
RG54_RS22270	PF13275	S4 domain
RG54_RS22275	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
RG54_RS22275	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
RG54_RS22280	PF00419	Fimbrial protein
RG54_RS22285	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
RG54_RS22285	PF02753	Pili assembly chaperone PapD, C-terminal domain
RG54_RS22290	PF00577	Outer membrane usher protein
RG54_RS22290	PF13953	PapC C-terminal domain
RG54_RS22290	PF13954	PapC N-terminal domain
RG54_RS22295	PF00419	Fimbrial protein
RG54_RS22300	PF00419	Fimbrial protein
RG54_RS22305	PF00072	Response regulator receiver domain
RG54_RS22305	PF00196	Bacterial regulatory proteins, luxR family
RG54_RS22315	PF12833	Helix-turn-helix domain
RG54_RS22325	PF14488	Domain of unknown function (DUF4434)
RG54_RS22330	PF13283	RG54_RS22330
RG54_RS22330	PF13429	Tetratricopeptide repeat
RG54_RS22335	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
RG54_RS22335	PF13632	Glycosyl transferase family group 2
RG54_RS22340	PF00512	His Kinase A (phospho-acceptor) domain
RG54_RS22340	PF00672	HAMP domain
RG54_RS22340	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS22345	PF00072	Response regulator receiver domain
RG54_RS22345	PF00486	Transcriptional regulatory protein, C terminal
RG54_RS22355	PF02321	Outer membrane efflux protein
RG54_RS22360	PF11604	Copper binding periplasmic protein CusF
RG54_RS22365	PF00529	HlyD family secretion protein
RG54_RS22365	PF16576	RG54_RS22365
RG54_RS22370	PF00873	AcrB/AcrD/AcrF family
RG54_RS22375	PF00324	Amino acid permease
RG54_RS22380	PF00924	Mechanosensitive ion channel
RG54_RS22385	PF00881	Nitroreductase family
RG54_RS22390	PF04237	YjbR
RG54_RS22395	PF06643	RG54_RS22395
RG54_RS22400	PF04107	Glutamate-cysteine ligase family 2(GCS2)
RG54_RS22415	PF01848	RG54_RS22415
RG54_RS22425	PF01848	RG54_RS22425
RG54_RS22430	PF01648	4'-phosphopantetheinyl transferase superfamily
RG54_RS22435	PF00593	TonB dependent receptor
RG54_RS22435	PF07715	TonB-dependent Receptor Plug Domain
RG54_RS22445	PF00756	Putative esterase
RG54_RS22445	PF11806	Domain of unknown function (DUF3327)
RG54_RS22450	PF03621	MbtH-like protein
RG54_RS22455	PF00501	AMP-binding enzyme
RG54_RS22455	PF00550	Phosphopantetheine attachment site
RG54_RS22455	PF00668	Condensation domain
RG54_RS22455	PF00975	Thioesterase domain
RG54_RS22460	PF02706	Chain length determinant protein
RG54_RS22465	PF00005	ABC transporter
RG54_RS22470	PF01032	FecCD transport family
RG54_RS22475	PF01032	FecCD transport family
RG54_RS22480	PF05977	Transmembrane secretion effector
RG54_RS22485	PF01497	Periplasmic binding protein
RG54_RS22495	PF00425	chorismate binding enzyme
RG54_RS22500	PF00501	AMP-binding enzyme
RG54_RS22500	PF13193	AMP-binding enzyme C-terminal domain
RG54_RS22505	PF00550	Phosphopantetheine attachment site
RG54_RS22505	PF00857	Isochorismatase family
RG54_RS22510	PF13561	Enoyl-(Acyl carrier protein) reductase
RG54_RS22515	PF03061	Thioesterase superfamily
RG54_RS22520	PF02554	RG54_RS22520
RG54_RS22520	PF13722	RG54_RS22520
RG54_RS22525	PF04328	RG54_RS22525
RG54_RS22530	PF00465	Iron-containing alcohol dehydrogenase
RG54_RS22535	PF00155	Aminotransferase class I and II
RG54_RS22540	PF02195	ParB-like nuclease domain
RG54_RS22545	PF01507	Phosphoadenosine phosphosulfate reductase family
RG54_RS22545	PF11922	RG54_RS22545
RG54_RS22550	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS22550	PF03466	LysR substrate binding domain
RG54_RS22555	PF13098	Thioredoxin-like domain
RG54_RS22560	PF00578	AhpC/TSA family
RG54_RS22560	PF10417	C-terminal domain of 1-Cys peroxiredoxin
RG54_RS22570	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RG54_RS22570	PF13192	Thioredoxin domain
RG54_RS22575	PF00582	Universal stress protein family
RG54_RS22580	PF00107	Zinc-binding dehydrogenase
RG54_RS22580	PF08240	Alcohol dehydrogenase GroES-like domain
RG54_RS22580	PF13823	Alcohol dehydrogenase GroES-associated
RG54_RS22590	PF01272	Transcription elongation factor, GreA/GreB, C-term
RG54_RS22590	PF14760	Rnk N-terminus
RG54_RS22600	PF00445	Ribonuclease T2 family
RG54_RS22605	PF00939	Sodium:sulfate symporter transmembrane region
RG54_RS22610	PF01874	ATP:dephospho-CoA triphosphoribosyl transferase
RG54_RS22615	PF03802	RG54_RS22615
RG54_RS22620	PF04223	Citrate lyase, alpha subunit (CitF)
RG54_RS22625	PF03328	HpcH/HpaI aldolase/citrate lyase family
RG54_RS22630	PF06857	RG54_RS22630
RG54_RS22635	PF08218	Citrate lyase ligase C-terminal domain
RG54_RS22640	PF00989	PAS fold
RG54_RS22640	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS22640	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
RG54_RS22640	PF17203	RG54_RS22640
RG54_RS22645	PF00072	Response regulator receiver domain
RG54_RS22645	PF12431	RG54_RS22645
RG54_RS22650	PF03606	RG54_RS22650
RG54_RS22660	PF07017	Antimicrobial peptide resistance and lipid A acylation protein PagP
RG54_RS22665	PF00313	'Cold-shock' DNA-binding domain
RG54_RS22670	PF02537	RG54_RS22670
RG54_RS22675	PF00795	Carbon-nitrogen hydrolase
RG54_RS22680	PF02416	mttA/Hcf106 family
RG54_RS22685	PF04055	Radical SAM superfamily
RG54_RS22685	PF16881	RG54_RS22685
RG54_RS22695	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS22695	PF03466	LysR substrate binding domain
RG54_RS22705	PF03099	Biotin/lipoate A/B protein ligase family
RG54_RS22710	PF04359	Protein of unknown function (DUF493)
RG54_RS22715	PF00768	D-alanyl-D-alanine carboxypeptidase
RG54_RS22715	PF07943	Penicillin-binding protein 5, C-terminal domain
RG54_RS22720	PF03330	Rare lipoprotein A (RlpA)-like double-psi beta-barrel
RG54_RS22720	PF05036	Sporulation related domain
RG54_RS22725	PF01098	RG54_RS22725
RG54_RS22730	PF00905	Penicillin binding protein transpeptidase domain
RG54_RS22730	PF03717	Penicillin-binding Protein dimerisation domain
RG54_RS22735	PF02590	Predicted SPOUT methyltransferase
RG54_RS22740	PF02410	Oligomerisation domain
RG54_RS22745	PF00300	Histidine phosphatase superfamily (branch 1)
RG54_RS22750	PF01467	Cytidylyltransferase
RG54_RS22755	PF06144	DNA polymerase III, delta subunit
RG54_RS22755	PF14840	Processivity clamp loader gamma complex DNA pol III C-term
RG54_RS22760	PF04390	Lipopolysaccharide-assembly
RG54_RS22765	PF00133	tRNA synthetases class I (I, L, M and V)
RG54_RS22765	PF08264	Anticodon-binding domain of tRNA
RG54_RS22765	PF13603	Leucyl-tRNA synthetase, Domain 2
RG54_RS22770	PF07295	RG54_RS22770
RG54_RS22775	PF08238	Sel1 repeat
RG54_RS22780	PF06889	RG54_RS22780
RG54_RS22790	PF08238	Sel1 repeat
RG54_RS22795	PF06889	RG54_RS22795
RG54_RS22805	PF00012	Hsp70 protein
RG54_RS22810	PF01156	Inosine-uridine preferring nucleoside hydrolase
RG54_RS22815	PF00005	ABC transporter
RG54_RS22820	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS22825	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS22830	PF00497	Bacterial extracellular solute-binding proteins, family 3
RG54_RS22835	PF01694	Rhomboid family
RG54_RS22835	PF10282	Lactonase, 7-bladed beta-propeller
RG54_RS22845	PF00795	Carbon-nitrogen hydrolase
RG54_RS22850	PF00571	CBS domain
RG54_RS22850	PF03471	Transporter associated domain
RG54_RS22855	PF02130	Uncharacterized protein family UPF0054
RG54_RS22860	PF02562	PhoH-like protein
RG54_RS22865	PF00919	Uncharacterized protein family UPF0004
RG54_RS22865	PF01938	TRAM domain
RG54_RS22865	PF04055	Radical SAM superfamily
RG54_RS22870	PF01494	FAD binding domain
RG54_RS22920	PF00733	Asparagine synthase
RG54_RS22920	PF13537	Glutamine amidotransferase domain
RG54_RS22930	PF13242	HAD-hyrolase-like
RG54_RS22930	PF13344	Haloacid dehalogenase-like hydrolase
RG54_RS22935	PF00480	ROK family
RG54_RS22935	PF01047	MarR family
RG54_RS22940	PF01979	Amidohydrolase family
RG54_RS22945	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
RG54_RS22950	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
RG54_RS22950	PF00367	phosphotransferase system, EIIB
RG54_RS22950	PF02378	Phosphotransferase system, EIIC
RG54_RS22955	PF00749	tRNA synthetases class I (E and Q), catalytic domain
RG54_RS22955	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
RG54_RS22965	PF03573	outer membrane porin, OprD family
RG54_RS22970	PF13982	RG54_RS22970
RG54_RS22975	PF01475	Ferric uptake regulator family
RG54_RS22990	PF00258	Flavodoxin
RG54_RS22995	PF01402	Ribbon-helix-helix protein, copG family
RG54_RS23000	PF12697	Alpha/beta hydrolase family
RG54_RS23005	PF03925	SeqA protein
RG54_RS23010	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
RG54_RS23010	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
RG54_RS23010	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
RG54_RS23010	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
RG54_RS23015	PF13520	Amino acid permease
RG54_RS23020	PF01276	Orn/Lys/Arg decarboxylase, major domain
RG54_RS23020	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
RG54_RS23020	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
RG54_RS23035	PF00072	Response regulator receiver domain
RG54_RS23035	PF00486	Transcriptional regulatory protein, C terminal
RG54_RS23040	PF00512	His Kinase A (phospho-acceptor) domain
RG54_RS23040	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS23040	PF02702	Osmosensitive K+ channel His kinase sensor domain
RG54_RS23040	PF13492	GAF domain
RG54_RS23040	PF13493	Domain of unknown function (DUF4118)
RG54_RS23045	PF02669	RG54_RS23045
RG54_RS23050	PF00122	E1-E2 ATPase
RG54_RS23050	PF00702	haloacid dehalogenase-like hydrolase
RG54_RS23055	PF03814	RG54_RS23055
RG54_RS23060	PF09604	RG54_RS23060
RG54_RS23065	PF10725	RG54_RS23065
RG54_RS23070	PF01609	Transposase DDE domain
RG54_RS23070	PF13808	RG54_RS23070
RG54_RS23075	PF08786	Domain of unknown function (DUF1795)
RG54_RS23080	PF03527	RG54_RS23080
RG54_RS23080	PF05593	RG54_RS23080
RG54_RS23090	PF08845	RG54_RS23090
RG54_RS23095	PF08349	RG54_RS23095
RG54_RS23100	PF00875	DNA photolyase
RG54_RS23100	PF03441	FAD binding domain of DNA photolyase
RG54_RS23105	PF00854	POT family
RG54_RS23110	PF01784	NIF3 (NGG1p interacting factor 3)
RG54_RS23115	PF02682	Allophanate hydrolase subunit 1
RG54_RS23120	PF02626	Allophanate hydrolase subunit 2
RG54_RS23125	PF03746	LamB/YcsF family
RG54_RS23130	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
RG54_RS23130	PF06827	Zinc finger found in FPG and IleRS
RG54_RS23130	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
RG54_RS23135	PF05145	RG54_RS23135
RG54_RS23140	PF00419	Fimbrial protein
RG54_RS23145	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
RG54_RS23145	PF02753	Pili assembly chaperone PapD, C-terminal domain
RG54_RS23150	PF00577	Outer membrane usher protein
RG54_RS23150	PF13953	PapC C-terminal domain
RG54_RS23150	PF13954	PapC N-terminal domain
RG54_RS23155	PF00419	Fimbrial protein
RG54_RS23160	PF00285	Citrate synthase
RG54_RS23180	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
RG54_RS23185	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
RG54_RS23190	PF00890	FAD binding domain
RG54_RS23190	PF02910	Fumarate reductase flavoprotein C-term
RG54_RS23195	PF13085	2Fe-2S iron-sulfur cluster binding domain
RG54_RS23195	PF13534	4Fe-4S dicluster domain
RG54_RS23205	PF00676	Dehydrogenase E1 component
RG54_RS23205	PF02779	Transketolase, pyrimidine binding domain
RG54_RS23205	PF16078	RG54_RS23205
RG54_RS23205	PF16870	RG54_RS23205
RG54_RS23210	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
RG54_RS23210	PF00364	Biotin-requiring enzyme
RG54_RS23210	PF02817	e3 binding domain
RG54_RS23215	PF00549	CoA-ligase
RG54_RS23215	PF08442	ATP-grasp domain
RG54_RS23220	PF00549	CoA-ligase
RG54_RS23220	PF02629	CoA binding domain
RG54_RS23225	PF00392	Bacterial regulatory proteins, gntR family
RG54_RS23225	PF07702	UTRA domain
RG54_RS23230	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
RG54_RS23230	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
RG54_RS23230	PF02378	Phosphotransferase system, EIIC
RG54_RS23235	PF01074	Glycosyl hydrolases family 38 N-terminal domain
RG54_RS23235	PF07748	Glycosyl hydrolases family 38 C-terminal domain
RG54_RS23235	PF09261	Alpha mannosidase, middle domain
RG54_RS23245	PF01654	RG54_RS23245
RG54_RS23250	PF02322	RG54_RS23250
RG54_RS23255	PF08173	RG54_RS23255
RG54_RS23260	PF09600	RG54_RS23260
RG54_RS23265	PF03061	Thioesterase superfamily
RG54_RS23270	PF01618	RG54_RS23270
RG54_RS23275	PF02472	Biopolymer transport protein ExbD/TolR
RG54_RS23280	PF06519	TolA C-terminal
RG54_RS23285	PF04052	TolB amino-terminal domain
RG54_RS23285	PF07676	WD40-like Beta Propeller Repeat
RG54_RS23290	PF00691	OmpA family
RG54_RS23295	PF13174	Tetratricopeptide repeat
RG54_RS23295	PF13432	Tetratricopeptide repeat
RG54_RS23295	PF16331	RG54_RS23295
RG54_RS23340	PF02445	Quinolinate synthetase A protein
RG54_RS23345	PF04973	RG54_RS23345
RG54_RS23350	PF01545	Cation efflux family
RG54_RS23355	PF13985	RG54_RS23355
RG54_RS23365	PF00793	DAHP synthetase I family
RG54_RS23370	PF00300	Histidine phosphatase superfamily (branch 1)
RG54_RS23375	PF01263	Aldose 1-epimerase
RG54_RS23380	PF00288	GHMP kinases N terminal domain
RG54_RS23380	PF08544	GHMP kinases C terminal
RG54_RS23380	PF10509	Galactokinase galactose-binding signature
RG54_RS23385	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
RG54_RS23385	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
RG54_RS23390	PF16363	RG54_RS23390
RG54_RS23395	PF00005	ABC transporter
RG54_RS23400	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS23400	PF03459	TOBE domain
RG54_RS23405	PF10766	Protein of unknown function (DUF2592)
RG54_RS23415	PF13531	Bacterial extracellular solute-binding protein
RG54_RS23420	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS23425	PF00005	ABC transporter
RG54_RS23425	PF03459	TOBE domain
RG54_RS23430	PF08282	haloacid dehalogenase-like hydrolase
RG54_RS23435	PF10282	Lactonase, 7-bladed beta-propeller
RG54_RS23440	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS23440	PF03466	LysR substrate binding domain
RG54_RS23445	PF04303	PrpF protein
RG54_RS23450	PF00939	Sodium:sulfate symporter transmembrane region
RG54_RS23455	PF00330	Aconitase family (aconitate hydratase)
RG54_RS23455	PF00694	Aconitase C-terminal domain
RG54_RS23460	PF01095	Pectinesterase
RG54_RS23470	PF01161	Phosphatidylethanolamine-binding protein
RG54_RS23475	PF00202	Aminotransferase class-III
RG54_RS23480	PF04055	Radical SAM superfamily
RG54_RS23480	PF06968	Biotin and Thiamin Synthesis associated domain
RG54_RS23485	PF00155	Aminotransferase class I and II
RG54_RS23490	PF08241	Methyltransferase domain
RG54_RS23495	PF13500	AAA domain
RG54_RS23500	PF00271	Helicase conserved C-terminal domain
RG54_RS23500	PF02151	UvrB/uvrC motif
RG54_RS23500	PF04851	Type III restriction enzyme, res subunit
RG54_RS23500	PF12344	Ultra-violet resistance protein B
RG54_RS23505	PF01933	Uncharacterised protein family UPF0052
RG54_RS23510	PF04055	Radical SAM superfamily
RG54_RS23510	PF06463	Molybdenum Cofactor Synthesis C
RG54_RS23510	PF13353	4Fe-4S single cluster domain
RG54_RS23515	PF00994	Probable molybdopterin binding domain
RG54_RS23520	PF01967	MoaC family
RG54_RS23525	PF02597	ThiS family
RG54_RS23530	PF02391	MoaE protein
RG54_RS23535	PF01027	Inhibitor of apoptosis-promoting Bax1
RG54_RS23540	PF01027	Inhibitor of apoptosis-promoting Bax1
RG54_RS23545	PF03706	RG54_RS23545
RG54_RS23550	PF13091	PLD-like domain
RG54_RS23555	PF03372	Endonuclease/Exonuclease/phosphatase family
RG54_RS23560	PF11076	RG54_RS23560
RG54_RS23565	PF12698	ABC-2 family transporter protein
RG54_RS23570	PF12698	ABC-2 family transporter protein
RG54_RS23575	PF00005	ABC transporter
RG54_RS23580	PF16576	RG54_RS23580
RG54_RS23585	PF00440	Bacterial regulatory proteins, tetR family
RG54_RS23585	PF09209	Domain of unknown function (DUF1956)
RG54_RS23590	PF00270	DEAD/DEAH box helicase
RG54_RS23590	PF00271	Helicase conserved C-terminal domain
RG54_RS23595	PF08719	Domain of unknown function (DUF1768)
RG54_RS23605	PF00270	DEAD/DEAH box helicase
RG54_RS23605	PF06733	DEAD_2
RG54_RS23605	PF13307	Helicase C-terminal domain
RG54_RS23610	PF02885	Glycosyl transferase family, helical bundle domain
RG54_RS23615	PF02615	Malate/L-lactate dehydrogenase
RG54_RS23620	PF07338	Protein of unknown function (DUF1471)
RG54_RS23625	PF01258	Prokaryotic dksA/traR C4-type zinc finger
RG54_RS23630	PF13640	2OG-Fe(II) oxygenase superfamily
RG54_RS23635	PF00593	TonB dependent receptor
RG54_RS23635	PF07715	TonB-dependent Receptor Plug Domain
RG54_RS23640	PF07338	Protein of unknown function (DUF1471)
RG54_RS23645	PF05971	Protein of unknown function (DUF890)
RG54_RS23650	PF00924	Mechanosensitive ion channel
RG54_RS23660	PF00005	ABC transporter
RG54_RS23665	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS23670	PF00497	Bacterial extracellular solute-binding proteins, family 3
RG54_RS23685	PF00210	Ferritin-like domain
RG54_RS23695	PF00892	EamA-like transporter family
RG54_RS23700	PF13505	Outer membrane protein beta-barrel domain
RG54_RS23705	PF00884	Sulfatase
RG54_RS23715	PF01325	Iron dependent repressor, N-terminal DNA binding domain
RG54_RS23715	PF02742	Iron dependent repressor, metal binding and dimerisation domain
RG54_RS23720	PF03600	Citrate transporter
RG54_RS23725	PF03734	L,D-transpeptidase catalytic domain
RG54_RS23730	PF00005	ABC transporter
RG54_RS23730	PF12848	ABC transporter
RG54_RS23740	PF07350	Protein of unknown function (DUF1479)
RG54_RS23745	PF08282	haloacid dehalogenase-like hydrolase
RG54_RS23750	PF01228	Glycine radical
RG54_RS23750	PF02901	Pyruvate formate lyase
RG54_RS23755	PF04055	Radical SAM superfamily
RG54_RS23755	PF13353	4Fe-4S single cluster domain
RG54_RS23760	PF00923	Transaldolase
RG54_RS23765	PF00899	ThiF family
RG54_RS23770	PF00994	Probable molybdopterin binding domain
RG54_RS23770	PF03453	MoeA N-terminal region (domain I and II)
RG54_RS23770	PF03454	MoeA C-terminal region (domain IV)
RG54_RS23775	PF01112	Asparaginase
RG54_RS23780	PF00005	ABC transporter
RG54_RS23780	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
RG54_RS23785	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RG54_RS23790	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS23795	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS23795	PF12911	RG54_RS23795
RG54_RS23800	PF00563	EAL domain
RG54_RS23800	PF17153	RG54_RS23800
RG54_RS23805	PF00990	GGDEF domain
RG54_RS23805	PF17156	RG54_RS23805
RG54_RS23810	PF00919	Uncharacterized protein family UPF0004
RG54_RS23810	PF04055	Radical SAM superfamily
RG54_RS23815	PF10799	RG54_RS23815
RG54_RS23820	PF07995	Glucose / Sorbosone dehydrogenase
RG54_RS23825	PF00043	Glutathione S-transferase, C-terminal domain
RG54_RS23825	PF02798	Glutathione S-transferase, N-terminal domain
RG54_RS23830	PF00768	D-alanyl-D-alanine carboxypeptidase
RG54_RS23830	PF07943	Penicillin-binding protein 5, C-terminal domain
RG54_RS23835	PF00455	RG54_RS23835
RG54_RS23835	PF08220	DeoR-like helix-turn-helix domain
RG54_RS23840	PF01569	PAP2 superfamily
RG54_RS23845	PF07690	Major Facilitator Superfamily
RG54_RS23855	PF08282	haloacid dehalogenase-like hydrolase
RG54_RS23860	PF07690	Major Facilitator Superfamily
RG54_RS23865	PF00440	Bacterial regulatory proteins, tetR family
RG54_RS23870	PF02080	TrkA-C domain
RG54_RS23870	PF06826	RG54_RS23870
RG54_RS23875	PF11045	RG54_RS23875
RG54_RS23880	PF00462	Glutaredoxin
RG54_RS23885	PF07214	RG54_RS23885
RG54_RS23890	PF00881	Nitroreductase family
RG54_RS23895	PF08443	RimK-like ATP-grasp domain
RG54_RS23900	PF10722	Putative bacterial sensory transduction regulator
RG54_RS23910	PF13416	Bacterial extracellular solute-binding protein
RG54_RS23915	PF00005	ABC transporter
RG54_RS23915	PF08402	TOBE domain
RG54_RS23920	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS23925	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS23930	PF10767	RG54_RS23930
RG54_RS23935	PF05958	tRNA (Uracil-5-)-methyltransferase
RG54_RS23945	PF00497	Bacterial extracellular solute-binding proteins, family 3
RG54_RS23950	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS23955	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS23960	PF00497	Bacterial extracellular solute-binding proteins, family 3
RG54_RS23965	PF00005	ABC transporter
RG54_RS23970	PF12883	Protein of unknown function (DUF3828)
RG54_RS23975	PF01906	Putative heavy-metal-binding
RG54_RS23980	PF01510	N-acetylmuramoyl-L-alanine amidase
RG54_RS23985	PF01370	NAD dependent epimerase/dehydratase family
RG54_RS23990	PF11066	RG54_RS23990
RG54_RS23990	PF13460	NADH(P)-binding
RG54_RS23995	PF01212	Beta-eliminating lyase
RG54_RS24000	PF00205	Thiamine pyrophosphate enzyme, central domain
RG54_RS24000	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
RG54_RS24000	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
RG54_RS24005	PF00111	2Fe-2S iron-sulfur cluster binding domain
RG54_RS24005	PF00175	Oxidoreductase NAD-binding domain
RG54_RS24005	PF00970	Oxidoreductase FAD-binding domain
RG54_RS24010	PF03063	Prismane/CO dehydrogenase family
RG54_RS24015	PF03956	RG54_RS24015
RG54_RS24025	PF00230	Major intrinsic protein
RG54_RS24035	PF11398	Protein of unknown function (DUF2813)
RG54_RS24040	PF04393	RG54_RS24040
RG54_RS24045	PF16576	RG54_RS24045
RG54_RS24050	PF00005	ABC transporter
RG54_RS24050	PF02687	RG54_RS24050
RG54_RS24050	PF12704	MacB-like periplasmic core domain
RG54_RS24055	PF00313	'Cold-shock' DNA-binding domain
RG54_RS24060	PF02617	ATP-dependent Clp protease adaptor protein ClpS
RG54_RS24065	PF00004	ATPase family associated with various cellular activities (AAA)
RG54_RS24065	PF02861	Clp amino terminal domain
RG54_RS24065	PF07724	AAA domain (Cdc48 subfamily)
RG54_RS24065	PF10431	C-terminal, D2-small domain, of ClpB protein
RG54_RS24080	PF01176	Translation initiation factor 1A / IF-1
RG54_RS24090	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
RG54_RS24095	PF00005	ABC transporter
RG54_RS24095	PF00664	ABC transporter transmembrane region
RG54_RS24100	PF00005	ABC transporter
RG54_RS24100	PF00664	ABC transporter transmembrane region
RG54_RS24105	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RG54_RS24115	PF01037	AsnC family
RG54_RS24115	PF13412	Winged helix-turn-helix DNA-binding
RG54_RS24120	PF01580	FtsK/SpoIIIE family
RG54_RS24120	PF09397	Ftsk gamma domain
RG54_RS24120	PF13491	RG54_RS24120
RG54_RS24125	PF03548	Outer membrane lipoprotein carrier protein LolA
RG54_RS24130	PF00004	ATPase family associated with various cellular activities (AAA)
RG54_RS24130	PF12002	MgsA AAA+ ATPase C terminal
RG54_RS24130	PF16193	RG54_RS24130
RG54_RS24135	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
RG54_RS24135	PF02403	Seryl-tRNA synthetase N-terminal domain
RG54_RS24140	PF00384	Molybdopterin oxidoreductase
RG54_RS24140	PF01568	Molydopterin dinucleotide binding domain
RG54_RS24140	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
RG54_RS24145	PF12800	4Fe-4S binding domain
RG54_RS24145	PF13247	4Fe-4S dicluster domain
RG54_RS24150	PF04976	RG54_RS24150
RG54_RS24155	PF00857	Isochorismatase family
RG54_RS24160	PF07690	Major Facilitator Superfamily
RG54_RS24165	PF13520	Amino acid permease
RG54_RS24170	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
RG54_RS24170	PF03466	LysR substrate binding domain
RG54_RS24175	PF02525	Flavodoxin-like fold
RG54_RS24180	PF04055	Radical SAM superfamily
RG54_RS24180	PF13353	4Fe-4S single cluster domain
RG54_RS24190	PF02624	YcaO-like family
RG54_RS24195	PF04239	Protein of unknown function (DUF421)
RG54_RS24200	PF00266	Aminotransferase class-V
RG54_RS24205	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
RG54_RS24210	PF01435	Peptidase family M48
RG54_RS24215	PF02224	Cytidylate kinase
RG54_RS24220	PF00575	S1 RNA binding domain
RG54_RS24225	PF00216	Bacterial DNA-binding protein
RG54_RS24230	PF00753	Metallo-beta-lactamase superfamily
RG54_RS24230	PF03772	RG54_RS24230
RG54_RS24235	PF00005	ABC transporter
RG54_RS24235	PF00664	ABC transporter transmembrane region
RG54_RS24240	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
RG54_RS24245	PF06224	RG54_RS24245
RG54_RS24250	PF03966	Trm112p-like protein
RG54_RS24255	PF02348	Cytidylyltransferase
RG54_RS24260	PF01636	Phosphotransferase enzyme family
RG54_RS24265	PF02698	DUF218 domain
RG54_RS24270	PF13847	Methyltransferase domain
RG54_RS24275	PF03882	KicB killing factor
RG54_RS24275	PF17192	RG54_RS24275
RG54_RS24275	PF17193	RG54_RS24275
RG54_RS24280	PF04288	MukE-like family
RG54_RS24285	PF04310	MukB N-terminal
RG54_RS24285	PF13558	Putative exonuclease SbcCD, C subunit
RG54_RS24285	PF16330	RG54_RS24285
RG54_RS24290	PF01471	Putative peptidoglycan binding domain
RG54_RS24290	PF03734	L,D-transpeptidase catalytic domain
RG54_RS24300	PF05951	RG54_RS24300
RG54_RS24305	PF00753	Metallo-beta-lactamase superfamily
RG54_RS24310	PF00155	Aminotransferase class I and II
RG54_RS24320	PF00267	Gram-negative porin
RG54_RS24325	PF00152	tRNA synthetases class II (D, K and N)
RG54_RS24325	PF01336	OB-fold nucleic acid binding domain
RG54_RS24330	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
RG54_RS24335	PF01433	Peptidase family M1
RG54_RS24335	PF11940	Domain of unknown function (DUF3458)
RG54_RS24345	PF00005	ABC transporter
RG54_RS24350	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS24355	PF00296	Luciferase-like monooxygenase
RG54_RS24360	PF09084	NMT1/THI5 like
RG54_RS24365	PF03358	NADPH-dependent FMN reductase
RG54_RS24380	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
RG54_RS24380	PF02753	Pili assembly chaperone PapD, C-terminal domain
RG54_RS24385	PF00577	Outer membrane usher protein
RG54_RS24385	PF13953	PapC C-terminal domain
RG54_RS24385	PF13954	PapC N-terminal domain
RG54_RS24390	PF00419	Fimbrial protein
RG54_RS24395	PF00419	Fimbrial protein
RG54_RS24400	PF00419	Fimbrial protein
RG54_RS24405	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
RG54_RS24405	PF02753	Pili assembly chaperone PapD, C-terminal domain
RG54_RS24410	PF01180	Dihydroorotate dehydrogenase
RG54_RS24415	PF07126	RG54_RS24415
RG54_RS24420	PF00111	2Fe-2S iron-sulfur cluster binding domain
RG54_RS24420	PF03473	MOSC domain
RG54_RS24420	PF03476	MOSC N-terminal beta barrel domain
RG54_RS24425	PF01170	Putative RNA methylase family UPF0020
RG54_RS24425	PF02926	THUMP domain
RG54_RS24425	PF10672	S-adenosylmethionine-dependent methyltransferase
RG54_RS24430	PF00005	ABC transporter
RG54_RS24430	PF12848	ABC transporter
RG54_RS24430	PF16326	RG54_RS24430
RG54_RS24435	PF04403	RG54_RS24435
RG54_RS24440	PF02470	RG54_RS24440
RG54_RS24445	PF03886	Protein of unknown function (DUF330)
RG54_RS24450	PF04957	Ribosome modulation factor
RG54_RS24455	PF07977	FabA-like domain
RG54_RS24460	PF05362	Lon protease (S16) C-terminal proteolytic domain
RG54_RS24460	PF13654	AAA domain
RG54_RS24465	PF06303	Organiser of macrodomain of Terminus of chromosome
RG54_RS24470	PF00691	OmpA family
RG54_RS24470	PF01389	OmpA-like transmembrane domain
RG54_RS24480	PF03846	Cell division inhibitor SulA
RG54_RS24485	PF04993	TfoX N-terminal domain
RG54_RS24485	PF04994	TfoX C-terminal domain
RG54_RS24490	PF12805	RG54_RS24490
RG54_RS24490	PF13515	RG54_RS24490
RG54_RS24495	PF03733	RG54_RS24495
RG54_RS24500	PF00580	UvrD/REP helicase N-terminal domain
RG54_RS24500	PF12462	RG54_RS24500
RG54_RS24500	PF13361	UvrD-like helicase C-terminal domain
RG54_RS24505	PF02142	MGS-like domain
RG54_RS24510	PF09829	RG54_RS24510
RG54_RS24520	PF13380	CoA binding domain
RG54_RS24525	PF08755	Hemimethylated DNA-binding protein YccV like
RG54_RS24530	PF10672	S-adenosylmethionine-dependent methyltransferase
RG54_RS24535	PF00708	Acylphosphatase
RG54_RS24540	PF04358	DsrC like protein
RG54_RS24545	PF01027	Inhibitor of apoptosis-promoting Bax1
RG54_RS24555	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
RG54_RS24555	PF14720	NiFe/NiFeSe hydrogenase small subunit C-terminal
RG54_RS24560	PF00374	Nickel-dependent hydrogenase
RG54_RS24565	PF01292	Prokaryotic cytochrome b561
RG54_RS24570	PF01750	Hydrogenase maturation protease
RG54_RS24575	PF07449	Hydrogenase-1 expression protein HyaE
RG54_RS24580	PF04809	HupH hydrogenase expression protein, C-terminal conserved region
RG54_RS24585	PF01654	RG54_RS24585
RG54_RS24590	PF02322	RG54_RS24590
RG54_RS24595	PF08173	RG54_RS24595
RG54_RS24600	PF00328	Histidine phosphatase superfamily (branch 2)
RG54_RS24605	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
RG54_RS24605	PF02706	Chain length determinant protein
RG54_RS24605	PF13807	RG54_RS24605
RG54_RS24610	PF01451	Low molecular weight phosphotyrosine protein phosphatase
RG54_RS24615	PF02563	Polysaccharide biosynthesis/export protein
RG54_RS24615	PF10531	SLBB domain
RG54_RS24620	PF06082	RG54_RS24620
RG54_RS24625	PF06251	Capsule biosynthesis GfcC
RG54_RS24630	PF11102	Group 4 capsule polysaccharide formation lipoprotein gfcB
RG54_RS24640	PF00313	'Cold-shock' DNA-binding domain
RG54_RS24645	PF00313	'Cold-shock' DNA-binding domain
RG54_RS24655	PF15939	RG54_RS24655
RG54_RS24660	PF08178	RG54_RS24660
RG54_RS24665	PF12801	RG54_RS24665
RG54_RS24670	PF00072	Response regulator receiver domain
RG54_RS24670	PF00512	His Kinase A (phospho-acceptor) domain
RG54_RS24670	PF00672	HAMP domain
RG54_RS24670	PF01627	Hpt domain
RG54_RS24670	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS24675	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
RG54_RS24680	PF00072	Response regulator receiver domain
RG54_RS24680	PF00486	Transcriptional regulatory protein, C terminal
RG54_RS24685	PF03264	NapC/NirT cytochrome c family, N-terminal region
RG54_RS24690	PF00384	Molybdopterin oxidoreductase
RG54_RS24690	PF01568	Molydopterin dinucleotide binding domain
RG54_RS24695	PF02613	Nitrate reductase delta subunit
RG54_RS24700	PF13591	MerR HTH family regulatory protein
RG54_RS24705	PF00226	DnaJ domain
RG54_RS24705	PF01556	DnaJ C terminal domain
RG54_RS24720	PF00328	Histidine phosphatase superfamily (branch 2)
RG54_RS24725	PF13993	RG54_RS24725
RG54_RS24730	PF03358	NADPH-dependent FMN reductase
RG54_RS24740	PF10685	RG54_RS24740
RG54_RS24750	PF00860	Permease family
RG54_RS24755	PF01613	Flavin reductase like domain
RG54_RS24760	PF00881	Nitroreductase family
RG54_RS24765	PF00561	alpha/beta hydrolase fold
RG54_RS24770	PF01042	Endoribonuclease L-PSP
RG54_RS24775	PF00857	Isochorismatase family
RG54_RS24780	PF00296	Luciferase-like monooxygenase
RG54_RS24785	PF00440	Bacterial regulatory proteins, tetR family
RG54_RS24785	PF08362	YcdC-like protein, C-terminal region
RG54_RS24790	PF00171	Aldehyde dehydrogenase family
RG54_RS24790	PF01619	Proline dehydrogenase
RG54_RS24790	PF14850	DNA-binding domain of Proline dehydrogenase
RG54_RS24805	PF00474	Sodium:solute symporter family
RG54_RS24815	PF03239	RG54_RS24815
RG54_RS24820	PF09375	Imelysin
RG54_RS24820	PF13473	Cupredoxin-like domain
RG54_RS24825	PF04261	Dyp-type peroxidase family
RG54_RS24835	PF02562	PhoH-like protein
RG54_RS24845	PF10881	RG54_RS24845
RG54_RS24855	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
RG54_RS24860	PF02811	PHP domain
RG54_RS24865	PF02613	Nitrate reductase delta subunit
RG54_RS24870	PF06496	RG54_RS24870
RG54_RS24875	PF03783	Curli production assembly/transport component CsgG
RG54_RS24880	PF10614	RG54_RS24880
RG54_RS24885	PF10627	RG54_RS24885
RG54_RS24890	PF00196	Bacterial regulatory proteins, luxR family
RG54_RS24905	PF07012	RG54_RS24905
RG54_RS24910	PF07012	RG54_RS24910
RG54_RS24915	PF10610	Thin aggregative fimbriae synthesis protein
RG54_RS24925	PF01661	Macro domain
RG54_RS24930	PF13091	PLD-like domain
RG54_RS24935	PF01757	RG54_RS24935
RG54_RS24940	PF04349	Periplasmic glucan biosynthesis protein, MdoG
RG54_RS24945	PF00535	Glycosyl transferase family 2
RG54_RS24950	PF07119	RG54_RS24950
RG54_RS24955	PF13984	RG54_RS24955
RG54_RS24965	PF07690	Major Facilitator Superfamily
RG54_RS24970	PF03279	RG54_RS24970
RG54_RS24975	PF00581	Rhodanese-like domain
RG54_RS24975	PF12368	RG54_RS24975
RG54_RS24980	PF04264	YceI-like domain
RG54_RS24985	PF01292	Prokaryotic cytochrome b561
RG54_RS24995	PF10968	RG54_RS24995
RG54_RS25000	PF01266	FAD dependent oxidoreductase
RG54_RS25005	PF13991	RG54_RS25005
RG54_RS25010	PF06183	DinI-like family
RG54_RS25015	PF01979	Amidohydrolase family
RG54_RS25020	PF07273	Protein of unknown function (DUF1439)
RG54_RS25025	PF04399	Glutaredoxin 2, C terminal domain
RG54_RS25025	PF13417	Glutathione S-transferase, N-terminal domain
RG54_RS25030	PF07690	Major Facilitator Superfamily
RG54_RS25035	PF13302	Acetyltransferase (GNAT) domain
RG54_RS25040	PF04337	Protein of unknown function, DUF480
RG54_RS25045	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
RG54_RS25050	PF03023	RG54_RS25050
RG54_RS25055	PF05130	FlgN protein
RG54_RS25060	PF04316	Anti-sigma-28 factor, FlgM
RG54_RS25065	PF13144	SAF-like
RG54_RS25070	PF00460	Flagella basal body rod protein
RG54_RS25075	PF00460	Flagella basal body rod protein
RG54_RS25075	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
RG54_RS25080	PF03963	RG54_RS25080
RG54_RS25080	PF13860	FlgD Ig-like domain
RG54_RS25080	PF13861	FlgD Tudor-like domain
RG54_RS25085	PF00460	Flagella basal body rod protein
RG54_RS25085	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
RG54_RS25085	PF07559	Flagellar basal body protein FlaE
RG54_RS25090	PF00460	Flagella basal body rod protein
RG54_RS25090	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
RG54_RS25095	PF00460	Flagella basal body rod protein
RG54_RS25095	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
RG54_RS25100	PF02107	RG54_RS25100
RG54_RS25105	PF02119	RG54_RS25105
RG54_RS25110	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
RG54_RS25110	PF10135	RG54_RS25110
RG54_RS25115	PF00460	Flagella basal body rod protein
RG54_RS25115	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
RG54_RS25120	PF00669	Bacterial flagellin N-terminal helical region
RG54_RS25125	PF00575	S1 RNA binding domain
RG54_RS25125	PF10150	Ribonuclease E/G family
RG54_RS25125	PF12111	Polyribonucleotide phosphorylase C terminal
RG54_RS25130	PF10848	RG54_RS25130
RG54_RS25135	PF00849	RNA pseudouridylate synthase
RG54_RS25135	PF01479	S4 domain
RG54_RS25140	PF02545	Maf-like protein
RG54_RS25145	PF02620	RG54_RS25145
RG54_RS25150	PF01783	Ribosomal L32p protein family
RG54_RS25155	PF02504	Fatty acid synthesis protein
RG54_RS25160	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
RG54_RS25160	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
RG54_RS25165	PF00698	Acyl transferase domain
RG54_RS25170	PF13561	Enoyl-(Acyl carrier protein) reductase
RG54_RS25175	PF00550	Phosphopantetheine attachment site
RG54_RS25180	PF00109	Beta-ketoacyl synthase, N-terminal domain
RG54_RS25180	PF02801	Beta-ketoacyl synthase, C-terminal domain
RG54_RS25185	PF01063	Aminotransferase class IV
RG54_RS25190	PF02618	YceG-like family
RG54_RS25195	PF02223	Thymidylate kinase
RG54_RS25200	PF09115	DNA polymerase III, delta subunit, C terminal
RG54_RS25200	PF13177	DNA polymerase III, delta subunit
RG54_RS25205	PF01026	TatD related DNase
RG54_RS25210	PF00367	phosphotransferase system, EIIB
RG54_RS25210	PF02378	Phosphotransferase system, EIIC
RG54_RS25215	PF00593	TonB dependent receptor
RG54_RS25215	PF07715	TonB-dependent Receptor Plug Domain
RG54_RS25220	PF01230	HIT domain
RG54_RS25225	PF07233	Protein of unknown function (DUF1425)
RG54_RS25230	PF13036	Protein of unknown function (DUF3897)
RG54_RS25235	PF01636	Phosphotransferase enzyme family
RG54_RS25240	PF00933	Glycosyl hydrolase family 3 N terminal domain
RG54_RS25245	PF05728	Uncharacterised protein family (UPF0227)
RG54_RS25255	PF07992	Pyridine nucleotide-disulphide oxidoreductase
RG54_RS25265	PF05433	RG54_RS25265
RG54_RS25270	PF00440	Bacterial regulatory proteins, tetR family
RG54_RS25275	PF07338	Protein of unknown function (DUF1471)
RG54_RS25280	PF01476	LysM domain
RG54_RS25280	PF03734	L,D-transpeptidase catalytic domain
RG54_RS25285	PF00270	DEAD/DEAH box helicase
RG54_RS25285	PF00271	Helicase conserved C-terminal domain
RG54_RS25285	PF02559	CarD-like/TRCF domain
RG54_RS25285	PF03461	TRCF domain
RG54_RS25290	PF01757	RG54_RS25290
RG54_RS25295	PF02687	RG54_RS25295
RG54_RS25295	PF12704	MacB-like periplasmic core domain
RG54_RS25300	PF00005	ABC transporter
RG54_RS25305	PF02687	RG54_RS25305
RG54_RS25305	PF12704	MacB-like periplasmic core domain
RG54_RS25310	PF00480	ROK family
RG54_RS25315	PF02146	Sir2 family
RG54_RS25320	PF04536	TLP18
RG54_RS25325	PF12158	RG54_RS25325
RG54_RS25330	PF13343	Bacterial extracellular solute-binding protein
RG54_RS25335	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS25340	PF00589	Phage integrase family
RG54_RS25340	PF09003	Bacteriophage lambda integrase, N-terminal domain
RG54_RS25345	PF07825	Excisionase-like protein
RG54_RS25350	PF06630	RG54_RS25350
RG54_RS25350	PF16473	RG54_RS25350
RG54_RS25355	PF07358	RG54_RS25355
RG54_RS25360	PF05358	RG54_RS25360
RG54_RS25375	PF07151	RG54_RS25375
RG54_RS25390	PF15943	RG54_RS25390
RG54_RS25395	PF06254	Protein of unknown function (DUF1019)
RG54_RS25415	PF06163	RG54_RS25415
RG54_RS25425	PF01848	RG54_RS25425
RG54_RS25440	PF06147	RG54_RS25440
RG54_RS25445	PF05866	Endodeoxyribonuclease RusA
RG54_RS25450	PF03589	Antitermination protein
RG54_RS25460	PF01555	DNA methylase
RG54_RS25475	PF08410	RG54_RS25475
RG54_RS25480	PF07125	RG54_RS25480
RG54_RS25485	PF05696	RG54_RS25485
RG54_RS25490	PF04971	RG54_RS25490
RG54_RS25510	PF00959	Phage lysozyme
RG54_RS25515	PF10721	RG54_RS25515
RG54_RS25520	PF01292	Prokaryotic cytochrome b561
RG54_RS25525	PF13132	RG54_RS25525
RG54_RS25535	PF07471	Phage DNA packaging protein Nu1
RG54_RS25540	PF05876	RG54_RS25540
RG54_RS25545	PF02831	gpW
RG54_RS25550	PF05136	RG54_RS25550
RG54_RS25555	PF01343	Peptidase family S49
RG54_RS25560	PF02924	Bacteriophage lambda head decoration protein D
RG54_RS25565	PF03864	Phage major capsid protein E
RG54_RS25570	PF14000	DNA packaging protein FI
RG54_RS25575	PF05354	Phage Head-Tail Attachment
RG54_RS25580	PF06763	RG54_RS25580
RG54_RS25585	PF06141	Phage minor tail protein U
RG54_RS25590	PF02368	Bacterial Ig-like domain (group 2)
RG54_RS25590	PF16461	RG54_RS25590
RG54_RS25595	PF06894	RG54_RS25595
RG54_RS25600	PF06223	RG54_RS25600
RG54_RS25605	PF06791	RG54_RS25605
RG54_RS25605	PF09718	RG54_RS25605
RG54_RS25610	PF05939	RG54_RS25610
RG54_RS25615	PF00267	Gram-negative porin
RG54_RS25620	PF05100	RG54_RS25620
RG54_RS25625	PF00877	NlpC/P60 family
RG54_RS25625	PF14464	Prokaryotic homologs of the JAB domain
RG54_RS25630	PF06805	RG54_RS25630
RG54_RS25635	PF09327	RG54_RS25635
RG54_RS25635	PF12421	RG54_RS25635
RG54_RS25635	PF13550	RG54_RS25635
RG54_RS25640	PF01848	RG54_RS25640
RG54_RS25645	PF01391	Collagen triple helix repeat (20 copies)
RG54_RS25645	PF08400	RG54_RS25645
RG54_RS25655	PF14301	RG54_RS25655
RG54_RS25665	PF00528	Binding-protein-dependent transport system inner membrane component
RG54_RS25670	PF00005	ABC transporter
RG54_RS25670	PF08402	TOBE domain
RG54_RS25680	PF01546	Peptidase family M20/M25/M40
RG54_RS25680	PF07687	Peptidase dimerisation domain
RG54_RS25685	PF08007	Cupin superfamily protein
RG54_RS25690	PF00672	HAMP domain
RG54_RS25690	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RG54_RS25690	PF08918	PhoQ Sensor
RG54_RS25695	PF00072	Response regulator receiver domain
RG54_RS25695	PF00486	Transcriptional regulatory protein, C terminal
RG54_RS25700	PF00206	Lyase
RG54_RS25700	PF08328	Adenylosuccinate lyase C-terminal
RG54_RS25705	PF04356	Protein of unknown function (DUF489)
RG54_RS25710	PF03054	tRNA methyl transferase
RG54_RS25715	PF00293	NUDIX domain
RG54_RS25720	PF00849	RNA pseudouridylate synthase
RG54_RS25725	PF00180	Isocitrate/isopropylmalate dehydrogenase
RG54_RS25740	PF07166	Protein of unknown function (DUF1398)
RG54_RS25745	PF13411	MerR HTH family regulatory protein
RG54_RS25750	PF00563	EAL domain
RG54_RS25750	PF04940	Sensors of blue-light using FAD
RG54_RS25755	PF10798	Biofilm development protein YmgB/AriR
RG54_RS25765	PF10798	Biofilm development protein YmgB/AriR
RG54_RS25775	PF00563	EAL domain
RG54_RS25775	PF12792	RG54_RS25775
RG54_RS25790	PF03212	Pertactin
RG54_RS25790	PF03797	Autotransporter beta-domain
RG54_RS25795	PF16456	RG54_RS25795
RG54_RS25800	PF13436	RG54_RS25800
RG54_RS25800	PF13488	RG54_RS25800
RG54_RS25820	PF03797	Autotransporter beta-domain
RG54_RS25830	PF03776	Septum formation topological specificity factor MinE
RG54_RS25835	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
RG54_RS25840	PF03775	Septum formation inhibitor MinC, C-terminal domain
RG54_RS25840	PF05209	Septum formation inhibitor MinC, N-terminal domain
RG54_RS25850	PF05666	RG54_RS25850
RG54_RS25855	PF04151	Bacterial pre-peptidase C-terminal domain
RG54_RS25860	PF05166	YcgL domain
RG54_RS25865	PF01557	Fumarylacetoacetate (FAA) hydrolase family
RG54_RS25870	PF03692	RG54_RS25870
RG54_RS25875	PF06109	Haemolysin E (HlyE)
RG54_RS25880	PF06109	Haemolysin E (HlyE)
RG54_RS25885	PF00717	Peptidase S24-like
RG54_RS25890	PF00817	impB/mucB/samB family
RG54_RS25895	PF00899	ThiF family
RG54_RS25895	PF14457	RG54_RS25895
RG54_RS25895	PF14464	Prokaryotic homologs of the JAB domain
RG54_RS25905	PF13280	RG54_RS25905
RG54_RS25915	PF00589	Phage integrase family
RG54_RS25920	PF00589	Phage integrase family
RG54_RS25920	PF02899	Phage integrase, N-terminal SAM-like domain
RG54_RS26055	PF03797	Autotransporter beta-domain
RG54_RS26335	PF00465	Iron-containing alcohol dehydrogenase
RG54_RS26560	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RG54_RS26565	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
RG54_RS26595	PF00324	Amino acid permease
RG54_RS26800	PF00582	Universal stress protein family
RG54_RS26820	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
RG54_RS26855	PF01546	Peptidase family M20/M25/M40
RG54_RS26895	PF01544	CorA-like Mg2+ transporter protein
RG54_RS26945	PF12167	RG54_RS26945
RG54_RS27115	PF02195	ParB-like nuclease domain