locus-tag class description RG60_RS00010 PF03230 Antirestriction protein RG60_RS00020 PF06067 Domain of unknown function (DUF932) RG60_RS00025 PF13018 Extended Signal Peptide of Type V secretion system RG60_RS00025 PF16168 Adhesin of bacterial autotransporter system, probable stalk RG60_RS00025 PF03797 Autotransporter beta-domain RG60_RS00045 PF03400 IS1 transposase RG60_RS00070 PF05321 Haemolysin expression modulating protein RG60_RS00120 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RG60_RS00120 PF08479 POTRA domain, ShlB-type RG60_RS00120 PF17287 POTRA domain RG60_RS00125 PF02794 RTX toxin acyltransferase family RG60_RS00130 PF13018 Extended Signal Peptide of Type V secretion system RG60_RS00130 PF04829 Pre-toxin domain with VENN motif RG60_RS00130 PF05860 haemagglutination activity domain RG60_RS00130 PF13332 Hemagglutinin repeat RG60_RS00140 PF06316 Enterobacterial Ail/Lom protein RG60_RS00160 PF01527 Transposase RG60_RS00165 PF00665 Integrase core domain RG60_RS00175 PF13087 AAA domain RG60_RS00175 PF13086 AAA domain RG60_RS00175 PF13195 Protein of unknown function (DUF4011) RG60_RS00180 PF01507 Phosphoadenosine phosphosulfate reductase family RG60_RS00180 PF11922 Domain of unknown function (DUF3440) RG60_RS00185 PF02195 ParB-like nuclease domain RG60_RS00205 PF00271 Helicase conserved C-terminal domain RG60_RS00205 PF08494 DEAD/H associated RG60_RS00205 PF00270 DEAD/DEAH box helicase RG60_RS00225 PF13505 Outer membrane protein beta-barrel domain RG60_RS00230 PF00884 Sulfatase RG60_RS00235 PF00589 Phage integrase family RG60_RS00235 PF13356 Arm DNA-binding domain RG60_RS00240 PF13614 AAA domain RG60_RS00250 PF00772 DnaB-like helicase N terminal domain RG60_RS00250 PF03796 DnaB-like helicase C terminal domain RG60_RS00290 PF01751 Toprim domain RG60_RS00290 PF01131 DNA topoisomerase RG60_RS00305 PF04754 Putative transposase, YhgA-like RG60_RS00405 PF05662 Coiled stalk of trimeric autotransporter adhesin RG60_RS00405 PF05658 Head domain of trimeric autotransporter adhesin RG60_RS00405 PF03895 YadA-like membrane anchor domain RG60_RS00440 PF12833 Helix-turn-helix domain RG60_RS00440 PF06445 GyrI-like small molecule binding domain RG60_RS00445 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RG60_RS00445 PF08479 POTRA domain, ShlB-type RG60_RS00445 PF17287 POTRA domain RG60_RS00450 PF04829 Pre-toxin domain with VENN motif RG60_RS00450 PF13332 Hemagglutinin repeat RG60_RS00450 PF13018 Extended Signal Peptide of Type V secretion system RG60_RS00450 PF05860 haemagglutination activity domain RG60_RS00460 PF07262 CDI immunity protein RG60_RS00475 PF04829 Pre-toxin domain with VENN motif RG60_RS00475 PF13332 Hemagglutinin repeat RG60_RS00485 PF07262 CDI immunity protein RG60_RS00490 PF04829 Pre-toxin domain with VENN motif RG60_RS00490 PF05860 haemagglutination activity domain RG60_RS00490 PF13332 Hemagglutinin repeat RG60_RS00490 PF13018 Extended Signal Peptide of Type V secretion system RG60_RS00510 PF00872 Transposase, Mutator family RG60_RS00515 PF12759 InsA C-terminal domain RG60_RS00515 PF03811 InsA N-terminal domain RG60_RS00520 PF03400 IS1 transposase RG60_RS00540 PF00106 short chain dehydrogenase RG60_RS00545 PF03284 Phenazine biosynthesis protein A/B RG60_RS00550 PF00857 Isochorismatase family RG60_RS00555 PF00425 chorismate binding enzyme RG60_RS00555 PF00117 Glutamine amidotransferase class-I RG60_RS00565 PF02567 Phenazine biosynthesis-like protein RG60_RS00570 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RG60_RS00570 PF01243 Pyridoxamine 5'-phosphate oxidase RG60_RS00590 PF14765 Polyketide synthase dehydratase RG60_RS00590 PF00550 Phosphopantetheine attachment site RG60_RS00590 PF08659 KR domain RG60_RS00590 PF16197 Ketoacyl-synthetase C-terminal extension RG60_RS00590 PF00109 Beta-ketoacyl synthase, N-terminal domain RG60_RS00590 PF00668 Condensation domain RG60_RS00590 PF13193 AMP-binding enzyme C-terminal domain RG60_RS00590 PF00501 AMP-binding enzyme RG60_RS00590 PF02801 Beta-ketoacyl synthase, C-terminal domain RG60_RS00605 PF00793 DAHP synthetase I family RG60_RS00610 PF01648 4'-phosphopantetheinyl transferase superfamily RG60_RS00610 PF17837 4'-phosphopantetheinyl transferase N-terminal domain RG60_RS00660 PF06755 CbtA_toxin of type IV toxin-antitoxin system RG60_RS00680 PF00589 Phage integrase family RG60_RS00680 PF02899 Phage integrase, N-terminal SAM-like domain RG60_RS00690 PF04474 Protein of unknown function (DUF554) RG60_RS00700 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RG60_RS00700 PF01276 Orn/Lys/Arg decarboxylase, major domain RG60_RS00700 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RG60_RS00705 PF03825 Nucleoside H+ symporter RG60_RS00710 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain RG60_RS00710 PF01464 Transglycosylase SLT domain RG60_RS00715 PF04362 Bacterial Fe(2+) trafficking RG60_RS00720 PF10576 Iron-sulfur binding domain of endonuclease III RG60_RS00720 PF00633 Helix-hairpin-helix motif RG60_RS00720 PF14815 NUDIX domain RG60_RS00720 PF00730 HhH-GPD superfamily base excision DNA repair protein RG60_RS00730 PF02390 Putative methyltransferase RG60_RS00735 PF04320 Protein with unknown function (DUF469) RG60_RS00740 PF11101 Protein of unknown function (DUF2884) RG60_RS00745 PF17763 Glutaminase/Asparaginase C-terminal domain RG60_RS00745 PF00710 Asparaginase, N-terminal RG60_RS00750 PF06717 Protein of unknown function (DUF1202) RG60_RS00755 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RG60_RS00760 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RG60_RS00765 PF03480 Bacterial extracellular solute-binding protein, family 7 RG60_RS00770 PF06969 HemN C-terminal domain RG60_RS00770 PF04055 Radical SAM superfamily RG60_RS00775 PF01725 Ham1 family RG60_RS00780 PF02594 Uncharacterised ACR, YggU family COG1872 RG60_RS00785 PF02325 YGGT family RG60_RS00790 PF01168 Alanine racemase, N-terminal domain RG60_RS00795 PF00437 Type II/IV secretion system protein RG60_RS00800 PF03652 Holliday junction resolvase RG60_RS00805 PF02622 Uncharacterized ACR, COG1678 RG60_RS00810 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain RG60_RS00810 PF02951 Prokaryotic glutathione synthetase, N-terminal domain RG60_RS00815 PF04452 RNA methyltransferase RG60_RS00820 PF04231 Endonuclease I RG60_RS00825 PF10263 SprT-like family RG60_RS00825 PF17283 SprT-like zinc ribbon domain RG60_RS00830 PF00083 Sugar (and other) transporter RG60_RS00840 PF02772 S-adenosylmethionine synthetase, central domain RG60_RS00840 PF02773 S-adenosylmethionine synthetase, C-terminal domain RG60_RS00840 PF00438 S-adenosylmethionine synthetase, N-terminal domain RG60_RS00850 PF17430 Uncharacterized YqgC-like RG60_RS00855 PF11036 Virulence promoting factor RG60_RS00860 PF17944 Arginine decarboxylase C-terminal helical extension RG60_RS00860 PF17810 Arginine decarboxylase helical bundle domain RG60_RS00860 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RG60_RS00870 PF00491 Arginase family RG60_RS00875 PF01435 Peptidase family M48 RG60_RS00880 PF00456 Transketolase, thiamine diphosphate binding domain RG60_RS00880 PF02780 Transketolase, C-terminal domain RG60_RS00880 PF02779 Transketolase, pyrimidine binding domain RG60_RS00885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG60_RS00890 PF02378 Phosphotransferase system, EIIC RG60_RS00890 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG60_RS00895 PF08240 Alcohol dehydrogenase GroES-like domain RG60_RS00895 PF00107 Zinc-binding dehydrogenase RG60_RS00900 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded RG60_RS00905 PF05068 Mannitol repressor RG60_RS00915 PF00005 ABC transporter RG60_RS00920 PF00005 ABC transporter RG60_RS00945 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RG60_RS00945 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RG60_RS00950 PF00162 Phosphoglycerate kinase RG60_RS00955 PF01116 Fructose-bisphosphate aldolase class-II RG60_RS00970 PF05552 Conserved TM helix RG60_RS00970 PF00924 Mechanosensitive ion channel RG60_RS00975 PF01810 LysE type translocator RG60_RS00980 PF04402 Protein of unknown function (DUF541) RG60_RS00985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS00985 PF03466 LysR substrate binding domain RG60_RS00990 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain RG60_RS00990 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain RG60_RS00995 PF00378 Enoyl-CoA hydratase/isomerase RG60_RS01005 PF01642 Methylmalonyl-CoA mutase RG60_RS01005 PF02310 B12 binding domain RG60_RS01015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS01015 PF03466 LysR substrate binding domain RG60_RS01020 PF03466 LysR substrate binding domain RG60_RS01025 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) RG60_RS01030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RG60_RS01030 PF01842 ACT domain RG60_RS01030 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RG60_RS01055 PF01812 5-formyltetrahydrofolate cyclo-ligase family RG60_RS01065 PF05164 Cell division protein ZapA RG60_RS01075 PF03695 Uncharacterised protein family (UPF0149) RG60_RS01080 PF00557 Metallopeptidase family M24 RG60_RS01080 PF05195 Aminopeptidase P, N-terminal domain RG60_RS01085 PF01494 FAD binding domain RG60_RS01090 PF01494 FAD binding domain RG60_RS01095 PF08669 Glycine cleavage T-protein C-terminal barrel domain RG60_RS01095 PF01571 Aminomethyltransferase folate-binding domain RG60_RS01100 PF01597 Glycine cleavage H-protein RG60_RS01105 PF02347 Glycine cleavage system P-protein RG60_RS01115 PF00232 Glycosyl hydrolase family 1 RG60_RS01120 PF04266 ASCH domain RG60_RS01125 PF03006 Haemolysin-III related RG60_RS01130 PF01571 Aminomethyltransferase folate-binding domain RG60_RS01135 PF03937 Flavinator of succinate dehydrogenase RG60_RS01140 PF07254 Membrane-bound toxin component of toxin-antitoxin system RG60_RS01145 PF00258 Flavodoxin RG60_RS01150 PF02899 Phage integrase, N-terminal SAM-like domain RG60_RS01150 PF00589 Phage integrase family RG60_RS01155 PF13098 Thioredoxin-like domain RG60_RS01155 PF10411 Disulfide bond isomerase protein N-terminus RG60_RS01160 PF01368 DHH family RG60_RS01160 PF02272 DHHA1 domain RG60_RS01160 PF17768 RecJ OB domain RG60_RS01170 PF01336 OB-fold nucleic acid binding domain RG60_RS01170 PF00152 tRNA synthetases class II (D, K and N) RG60_RS01175 PF00293 NUDIX domain RG60_RS01185 PF00860 Permease family RG60_RS01195 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG60_RS01195 PF13247 4Fe-4S dicluster domain RG60_RS01195 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RG60_RS01200 PF13247 4Fe-4S dicluster domain RG60_RS01205 PF00860 Permease family RG60_RS01210 PF01979 Amidohydrolase family RG60_RS01215 PF00860 Permease family RG60_RS01220 PF01799 [2Fe-2S] binding domain RG60_RS01220 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RG60_RS01220 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RG60_RS01225 PF00941 FAD binding domain in molybdopterin dehydrogenase RG60_RS01230 PF01979 Amidohydrolase family RG60_RS01235 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RG60_RS01235 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG60_RS01240 PF12804 MobA-like NTP transferase domain RG60_RS01250 PF02625 XdhC and CoxI family RG60_RS01250 PF13478 XdhC Rossmann domain RG60_RS01255 PF00696 Amino acid kinase family RG60_RS01260 PF01979 Amidohydrolase family RG60_RS01265 PF07687 Peptidase dimerisation domain RG60_RS01265 PF01546 Peptidase family M20/M25/M40 RG60_RS01270 PF00291 Pyridoxal-phosphate dependent enzyme RG60_RS01275 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RG60_RS01275 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RG60_RS01280 PF00158 Sigma-54 interaction domain RG60_RS01280 PF13188 PAS domain RG60_RS01280 PF02954 Bacterial regulatory protein, Fis family RG60_RS01285 PF00111 2Fe-2S iron-sulfur cluster binding domain RG60_RS01285 PF01799 [2Fe-2S] binding domain RG60_RS01290 PF03450 CO dehydrogenase flavoprotein C-terminal domain RG60_RS01290 PF00941 FAD binding domain in molybdopterin dehydrogenase RG60_RS01295 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RG60_RS01295 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RG60_RS01305 PF01476 LysM domain RG60_RS01305 PF01551 Peptidase family M23 RG60_RS01400 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RG60_RS01410 PF01313 Bacterial export proteins, family 3 RG60_RS01415 PF01311 Bacterial export proteins, family 1 RG60_RS01420 PF01312 FlhB HrpN YscU SpaS Family RG60_RS01425 PF01312 FlhB HrpN YscU SpaS Family RG60_RS01440 PF09480 Type III secretion system protein PrgH-EprH (PrgH) RG60_RS01445 PF09480 Type III secretion system protein PrgH-EprH (PrgH) RG60_RS01460 PF01514 Secretory protein of YscJ/FliF family RG60_RS01475 PF00072 Response regulator receiver domain RG60_RS01475 PF00196 Bacterial regulatory proteins, luxR family RG60_RS01480 PF00072 Response regulator receiver domain RG60_RS01480 PF00196 Bacterial regulatory proteins, luxR family RG60_RS01495 PF00486 Transcriptional regulatory protein, C terminal RG60_RS01505 PF07720 Tetratricopeptide repeat RG60_RS01530 PF00486 Transcriptional regulatory protein, C terminal RG60_RS01535 PF00196 Bacterial regulatory proteins, luxR family RG60_RS01540 PF03222 Tryptophan/tyrosine permease family RG60_RS01545 PF02803 Thiolase, C-terminal domain RG60_RS01545 PF00108 Thiolase, N-terminal domain RG60_RS01550 PF04962 KduI/IolB family RG60_RS01560 PF00083 Sugar (and other) transporter RG60_RS01565 PF01177 Asp/Glu/Hydantoin racemase RG60_RS01570 PF03466 LysR substrate binding domain RG60_RS01570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS01575 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RG60_RS01575 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RG60_RS01580 PF00356 Bacterial regulatory proteins, lacI family RG60_RS01590 PF01553 Acyltransferase RG60_RS01590 PF00501 AMP-binding enzyme RG60_RS01595 PF07690 Major Facilitator Superfamily RG60_RS01600 PF00248 Aldo/keto reductase family RG60_RS01605 PF06004 Bacterial protein of unknown function (DUF903) RG60_RS01610 PF03741 Integral membrane protein TerC family RG60_RS01615 PF02976 DNA mismatch repair enzyme MutH RG60_RS01630 PF00293 NUDIX domain RG60_RS01635 PF02896 PEP-utilising enzyme, TIM barrel domain RG60_RS01635 PF01590 GAF domain RG60_RS01635 PF00391 PEP-utilising enzyme, mobile domain RG60_RS01635 PF05524 PEP-utilising enzyme, N-terminal RG60_RS01640 PF01790 Prolipoprotein diacylglyceryl transferase RG60_RS01645 PF00303 Thymidylate synthase RG60_RS01650 PF07963 Prokaryotic N-terminal methylation motif RG60_RS01655 PF07963 Prokaryotic N-terminal methylation motif RG60_RS01660 PF10713 Protein of unknown function (DUF2509) RG60_RS01665 PF12528 Type II secretion prepilin peptidase dependent protein C RG60_RS01665 PF07963 Prokaryotic N-terminal methylation motif RG60_RS01670 PF17946 RecC C-terminal domain RG60_RS01675 PF00675 Insulinase (Peptidase family M16) RG60_RS01675 PF16187 Middle or third domain of peptidase_M16 RG60_RS01675 PF05193 Peptidase M16 inactive domain RG60_RS01680 PF12705 PD-(D/E)XK nuclease superfamily RG60_RS01680 PF00580 UvrD/REP helicase N-terminal domain RG60_RS01680 PF13361 UvrD-like helicase C-terminal domain RG60_RS01685 PF13538 UvrD-like helicase C-terminal domain RG60_RS01690 PF00583 Acetyltransferase (GNAT) family RG60_RS01690 PF00696 Amino acid kinase family RG60_RS01695 PF11741 AMIN domain RG60_RS01695 PF01520 N-acetylmuramoyl-L-alanine amidase RG60_RS01720 PF06725 3D domain RG60_RS01720 PF03562 MltA specific insert domain RG60_RS01725 PF00899 ThiF family RG60_RS01730 PF02657 Fe-S metabolism associated domain RG60_RS01735 PF00266 Aminotransferase class-V RG60_RS01740 PF06004 Bacterial protein of unknown function (DUF903) RG60_RS01745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS01745 PF03466 LysR substrate binding domain RG60_RS01750 PF04241 Protein of unknown function (DUF423) RG60_RS01755 PF01728 FtsJ-like methyltransferase RG60_RS01755 PF18125 RlmM ferredoxin-like domain RG60_RS01760 PF08220 DeoR-like helix-turn-helix domain RG60_RS01760 PF00455 DeoR C terminal sensor domain RG60_RS01765 PF05025 RbsD / FucU transport protein family RG60_RS01770 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG60_RS01770 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RG60_RS01775 PF02952 L-fucose isomerase, C-terminal domain RG60_RS01775 PF07881 L-fucose isomerase, first N-terminal domain RG60_RS01775 PF07882 L-fucose isomerase, second N-terminal domain RG60_RS01780 PF07690 Major Facilitator Superfamily RG60_RS01785 PF00596 Class II Aldolase and Adducin N-terminal domain RG60_RS01790 PF00465 Iron-containing alcohol dehydrogenase RG60_RS01795 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RG60_RS01795 PF01367 5'-3' exonuclease, C-terminal SAM fold RG60_RS01800 PF03313 Serine dehydratase alpha chain RG60_RS01800 PF03315 Serine dehydratase beta chain RG60_RS01810 PF11892 Domain of unknown function (DUF3412) RG60_RS01810 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases RG60_RS01810 PF03641 Possible lysine decarboxylase RG60_RS01815 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term RG60_RS01815 PF14489 QueF-like protein RG60_RS01820 PF07348 Syd protein (SUKH-2) RG60_RS01830 PF04287 tRNA pseudouridine synthase C RG60_RS01835 PF00849 RNA pseudouridylate synthase RG60_RS01840 PF00258 Flavodoxin RG60_RS01845 PF07690 Major Facilitator Superfamily RG60_RS01850 PF13378 Enolase C-terminal domain-like RG60_RS01850 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RG60_RS01855 PF13378 Enolase C-terminal domain-like RG60_RS01860 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RG60_RS01860 PF00072 Response regulator receiver domain RG60_RS01860 PF01627 Hpt domain RG60_RS01860 PF00512 His Kinase A (phospho-acceptor) domain RG60_RS01860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS01860 PF00672 HAMP domain RG60_RS01865 PF01938 TRAM domain RG60_RS01865 PF05958 tRNA (Uracil-5-)-methyltransferase RG60_RS01870 PF02824 TGS domain RG60_RS01870 PF04607 Region found in RelA / SpoT proteins RG60_RS01870 PF13291 ACT domain RG60_RS01875 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin RG60_RS01880 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RG60_RS01885 PF03819 MazG nucleotide pyrophosphohydrolase domain RG60_RS01890 PF06418 CTP synthase N-terminus RG60_RS01890 PF00117 Glutamine amidotransferase class-I RG60_RS01895 PF03952 Enolase, N-terminal domain RG60_RS01895 PF00113 Enolase, C-terminal TIM barrel domain RG60_RS01905 PF04536 TPM domain RG60_RS01915 PF04055 Radical SAM superfamily RG60_RS01920 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RG60_RS01920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG60_RS01925 PF01242 6-pyruvoyl tetrahydropterin synthase RG60_RS01930 PF00667 FAD binding domain RG60_RS01930 PF00258 Flavodoxin RG60_RS01930 PF00175 Oxidoreductase NAD-binding domain RG60_RS01935 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RG60_RS01935 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RG60_RS01940 PF01507 Phosphoadenosine phosphosulfate reductase family RG60_RS01945 PF01848 Hok/gef family RG60_RS01950 PF00271 Helicase conserved C-terminal domain RG60_RS01950 PF00270 DEAD/DEAH box helicase RG60_RS01950 PF18019 HD domain RG60_RS01955 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) RG60_RS01970 PF09344 CT1975-like protein RG60_RS01975 PF09704 CRISPR-associated protein (Cas_Cas5) RG60_RS01985 PF01867 CRISPR associated protein Cas1 RG60_RS01990 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) RG60_RS01995 PF04389 Peptidase family M28 RG60_RS02000 PF01507 Phosphoadenosine phosphosulfate reductase family RG60_RS02005 PF00009 Elongation factor Tu GTP binding domain RG60_RS02015 PF12084 Protein of unknown function (DUF3561) RG60_RS02020 PF04977 Septum formation initiator RG60_RS02025 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RG60_RS02030 PF02542 YgbB family RG60_RS02035 PF01142 tRNA pseudouridine synthase D (TruD) RG60_RS02040 PF01975 Survival protein SurE RG60_RS02050 PF01551 Peptidase family M23 RG60_RS02050 PF01476 LysM domain RG60_RS02055 PF04545 Sigma-70, region 4 RG60_RS02055 PF04539 Sigma-70 region 3 RG60_RS02055 PF04542 Sigma-70 region 2 RG60_RS02055 PF00140 Sigma-70 factor, region 1.2 RG60_RS02060 PF01047 MarR family RG60_RS02065 PF02441 Flavoprotein RG60_RS02080 PF02447 GntP family permease RG60_RS02085 PF01261 Xylose isomerase-like TIM barrel RG60_RS02090 PF00596 Class II Aldolase and Adducin N-terminal domain RG60_RS02095 PF17042 Nucleotide-binding C-terminal domain RG60_RS02095 PF07005 Sugar-binding N-terminal domain RG60_RS02100 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RG60_RS02100 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RG60_RS02105 PF08220 DeoR-like helix-turn-helix domain RG60_RS02105 PF00455 DeoR C terminal sensor domain RG60_RS02110 PF00149 Calcineurin-like phosphoesterase RG60_RS02115 PF00488 MutS domain V RG60_RS02115 PF05190 MutS family domain IV RG60_RS02115 PF05192 MutS domain III RG60_RS02115 PF05188 MutS domain II RG60_RS02115 PF01624 MutS domain I RG60_RS02120 PF11756 Nitrous oxide-stimulated promoter RG60_RS02125 PF00158 Sigma-54 interaction domain RG60_RS02125 PF01590 GAF domain RG60_RS02130 PF00586 AIR synthase related protein, N-terminal domain RG60_RS02130 PF02769 AIR synthase related protein, C-terminal domain RG60_RS02135 PF01924 Hydrogenase formation hypA family RG60_RS02140 PF01455 HupF/HypC family RG60_RS02145 PF02492 CobW/HypB/UreG, nucleotide-binding domain RG60_RS02150 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA RG60_RS02155 PF11046 Transcriptional repressor of hyc and hyp operons RG60_RS02165 PF13247 4Fe-4S dicluster domain RG60_RS02170 PF00361 Proton-conducting membrane transporter RG60_RS02175 PF00146 NADH dehydrogenase RG60_RS02180 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RG60_RS02180 PF00374 Nickel-dependent hydrogenase RG60_RS02180 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RG60_RS02185 PF12838 4Fe-4S dicluster domain RG60_RS02190 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RG60_RS02195 PF07450 Formate hydrogenlyase maturation protein HycH RG60_RS02200 PF01750 Hydrogenase maturation protease RG60_RS02210 PF01381 Helix-turn-helix RG60_RS02215 PF00232 Glycosyl hydrolase family 1 RG60_RS02220 PF02378 Phosphotransferase system, EIIC RG60_RS02220 PF00367 phosphotransferase system, EIIB RG60_RS02225 PF00356 Bacterial regulatory proteins, lacI family RG60_RS02230 PF13247 4Fe-4S dicluster domain RG60_RS02230 PF12800 4Fe-4S binding domain RG60_RS02235 PF01300 Telomere recombination RG60_RS02235 PF17788 HypF Kae1-like domain RG60_RS02235 PF00708 Acylphosphatase RG60_RS02235 PF07503 HypF finger RG60_RS02240 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG60_RS02240 PF18113 Rubredoxin binding C-terminal domain RG60_RS02245 PF00301 Rubredoxin RG60_RS02245 PF00258 Flavodoxin RG60_RS02245 PF00753 Metallo-beta-lactamase superfamily RG60_RS02250 PF01590 GAF domain RG60_RS02250 PF00158 Sigma-54 interaction domain RG60_RS02255 PF01380 SIS domain RG60_RS02255 PF00571 CBS domain RG60_RS02260 PF08220 DeoR-like helix-turn-helix domain RG60_RS02260 PF00455 DeoR C terminal sensor domain RG60_RS02265 PF06923 Glucitol operon activator protein (GutM) RG60_RS02270 PF00106 short chain dehydrogenase RG60_RS02275 PF03829 PTS system glucitol/sorbitol-specific IIA component RG60_RS02280 PF03612 Sorbitol phosphotransferase enzyme II N-terminus RG60_RS02280 PF07663 Sorbitol phosphotransferase enzyme II C-terminus RG60_RS02285 PF03608 PTS system enzyme II sorbitol-specific factor RG60_RS02290 PF13406 Transglycosylase SLT domain RG60_RS02295 PF02464 Competence-damaged protein RG60_RS02300 PF00154 recA bacterial DNA recombination protein RG60_RS02305 PF02631 RecX family RG60_RS02315 PF01411 tRNA synthetases class II (A) RG60_RS02315 PF02272 DHHA1 domain RG60_RS02315 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RG60_RS02320 PF02599 Global regulator protein family RG60_RS02345 PF13419 Haloacid dehalogenase-like hydrolase RG60_RS02350 PF09335 SNARE associated Golgi protein RG60_RS02355 PF04262 Glutamate-cysteine ligase RG60_RS02360 PF02664 S-Ribosylhomocysteinase (LuxS) RG60_RS02365 PF07690 Major Facilitator Superfamily RG60_RS02370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG60_RS02370 PF00529 HlyD membrane-fusion protein of T1SS RG60_RS02375 PF01047 MarR family RG60_RS02380 PF05437 Branched-chain amino acid transport protein (AzlD) RG60_RS02385 PF03591 AzlC protein RG60_RS02390 PF07690 Major Facilitator Superfamily RG60_RS02400 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RG60_RS02405 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS02410 PF00571 CBS domain RG60_RS02410 PF00005 ABC transporter RG60_RS02415 PF00268 Ribonucleotide reductase, small chain RG60_RS02420 PF02867 Ribonucleotide reductase, barrel domain RG60_RS02420 PF00317 Ribonucleotide reductase, all-alpha domain RG60_RS02420 PF08343 Ribonucleotide reductase N-terminal RG60_RS02425 PF07972 NrdI Flavodoxin like RG60_RS02430 PF00462 Glutaredoxin RG60_RS02435 PF05957 Bacterial protein of unknown function (DUF883) RG60_RS02440 PF09400 Protein of unknown function (DUF2002) RG60_RS02445 PF06610 L-alanine exporter RG60_RS02450 PF00816 H-NS histone family RG60_RS02455 PF00581 Rhodanese-like domain RG60_RS02455 PF11127 Protein of unknown function (DUF2892) RG60_RS02460 PF01022 Bacterial regulatory protein, arsR family RG60_RS02465 PF01679 Proteolipid membrane potential modulator RG60_RS02470 PF01476 LysM domain RG60_RS02470 PF04972 BON domain RG60_RS02475 PF00392 Bacterial regulatory proteins, gntR family RG60_RS02475 PF07729 FCD domain RG60_RS02480 PF00324 Amino acid permease RG60_RS02485 PF00202 Aminotransferase class-III RG60_RS02490 PF00171 Aldehyde dehydrogenase family RG60_RS02495 PF01266 FAD dependent oxidoreductase RG60_RS02500 PF08943 CsiD RG60_RS02505 PF00128 Alpha amylase, catalytic domain RG60_RS02515 PF17612 Family of unknown function (DUF5507) RG60_RS02520 PF17621 Family of unknown function (DUF5508) RG60_RS02540 PF03797 Autotransporter beta-domain RG60_RS02540 PF03212 Pertactin RG60_RS02540 PF16168 Adhesin of bacterial autotransporter system, probable stalk RG60_RS02545 PF00665 Integrase core domain RG60_RS02550 PF01527 Transposase RG60_RS02555 PF01926 50S ribosome-binding GTPase RG60_RS02560 PF05930 Prophage CP4-57 regulatory protein (AlpA) RG60_RS02590 PF00589 Phage integrase family RG60_RS02590 PF13356 Arm DNA-binding domain RG60_RS02600 PF01668 SmpB protein RG60_RS02605 PF03364 Polyketide cyclase / dehydrase and lipid transport RG60_RS02610 PF03658 RnfH family Ubiquitin RG60_RS02615 PF04355 SmpA / OmlA family RG60_RS02620 PF02463 RecF/RecN/SMC N terminal domain RG60_RS02625 PF01513 ATP-NAD kinase RG60_RS02635 PF01025 GrpE RG60_RS02640 PF00571 CBS domain RG60_RS02640 PF03471 Transporter associated domain RG60_RS02640 PF01595 Cyclin M transmembrane N-terminal domain RG60_RS02645 PF01578 Cytochrome C assembly protein RG60_RS02650 PF02978 Signal peptide binding domain RG60_RS02650 PF00448 SRP54-type protein, GTPase domain RG60_RS02650 PF02881 SRP54-type protein, helical bundle domain RG60_RS02655 PF00886 Ribosomal protein S16 RG60_RS02660 PF05239 PRC-barrel domain RG60_RS02660 PF01782 RimM N-terminal domain RG60_RS02665 PF01746 tRNA (Guanine-1)-methyltransferase RG60_RS02670 PF01245 Ribosomal protein L19 RG60_RS02675 PF00691 OmpA family RG60_RS02680 PF17152 Periplasmic sensor domain RG60_RS02680 PF00990 Diguanylate cyclase, GGDEF domain RG60_RS02685 PF13689 YfiR/HmsC-like RG60_RS02690 PF10973 Protein of unknown function (DUF2799) RG60_RS02695 PF00793 DAHP synthetase I family RG60_RS02700 PF02153 Prephenate dehydrogenase RG60_RS02700 PF01817 Chorismate mutase type II RG60_RS02705 PF01817 Chorismate mutase type II RG60_RS02705 PF00800 Prephenate dehydratase RG60_RS02710 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RG60_RS02720 PF13525 Outer membrane lipoprotein RG60_RS02725 PF00849 RNA pseudouridylate synthase RG60_RS02725 PF01479 S4 domain RG60_RS02730 PF02578 Multi-copper polyphenol oxidoreductase laccase RG60_RS02735 PF17871 AAA lid domain RG60_RS02735 PF02861 Clp amino terminal domain, pathogenicity island component RG60_RS02735 PF07724 AAA domain (Cdc48 subfamily) RG60_RS02735 PF10431 C-terminal, D2-small domain, of ClpB protein RG60_RS02735 PF00004 ATPase family associated with various cellular activities (AAA) RG60_RS02770 PF00083 Sugar (and other) transporter RG60_RS02775 PF10043 Predicted periplasmic lipoprotein (DUF2279) RG60_RS02780 PF13091 PLD-like domain RG60_RS02785 PF13607 Succinyl-CoA ligase like flavodoxin domain RG60_RS02785 PF13380 CoA binding domain RG60_RS02785 PF00583 Acetyltransferase (GNAT) family RG60_RS02790 PF03942 DTW domain RG60_RS02795 PF00085 Thioredoxin RG60_RS02800 PF00588 SpoU rRNA Methylase family RG60_RS02800 PF08032 RNA 2'-O ribose methyltransferase substrate binding RG60_RS02805 PF03167 Uracil DNA glycosylase superfamily RG60_RS02810 PF01228 Glycine radical RG60_RS02815 PF01810 LysE type translocator RG60_RS02820 PF03466 LysR substrate binding domain RG60_RS02820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS02825 PF01548 Transposase RG60_RS02825 PF02371 Transposase IS116/IS110/IS902 family RG60_RS02830 PF00271 Helicase conserved C-terminal domain RG60_RS02830 PF00270 DEAD/DEAH box helicase RG60_RS02835 PF05175 Methyltransferase small domain RG60_RS02840 PF02910 Fumarate reductase flavoprotein C-term RG60_RS02840 PF00890 FAD binding domain RG60_RS02850 PF08281 Sigma-70, region 4 RG60_RS02850 PF04542 Sigma-70 region 2 RG60_RS02855 PF03872 Anti sigma-E protein RseA, N-terminal domain RG60_RS02855 PF03873 Anti sigma-E protein RseA, C-terminal domain RG60_RS02860 PF03888 MucB/RseB N-terminal domain RG60_RS02860 PF17188 MucB/RseB C-terminal domain RG60_RS02870 PF03144 Elongation factor Tu domain 2 RG60_RS02870 PF06421 GTP-binding protein LepA C-terminus RG60_RS02870 PF00009 Elongation factor Tu GTP binding domain RG60_RS02870 PF00679 Elongation factor G C-terminus RG60_RS02875 PF10502 Signal peptidase, peptidase S26 RG60_RS02885 PF14622 Ribonuclease-III-like RG60_RS02885 PF00035 Double-stranded RNA binding motif RG60_RS02890 PF01926 50S ribosome-binding GTPase RG60_RS02890 PF07650 KH domain RG60_RS02895 PF02565 Recombination protein O C terminal RG60_RS02895 PF11967 Recombination protein O N terminal RG60_RS02900 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ RG60_RS02905 PF01648 4'-phosphopantetheinyl transferase superfamily RG60_RS02925 PF12838 4Fe-4S dicluster domain RG60_RS02930 PF01418 Helix-turn-helix domain, rpiR family RG60_RS02930 PF01380 SIS domain RG60_RS02940 PF14437 MafB19-like deaminase RG60_RS02945 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG60_RS02945 PF01464 Transglycosylase SLT domain RG60_RS02955 PF02769 AIR synthase related protein, C-terminal domain RG60_RS02955 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RG60_RS02955 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal RG60_RS02960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS02960 PF00512 His Kinase A (phospho-acceptor) domain RG60_RS02965 PF13942 YfhG lipoprotein RG60_RS02970 PF00072 Response regulator receiver domain RG60_RS02970 PF00158 Sigma-54 interaction domain RG60_RS02975 PF00543 Nitrogen regulatory protein P-II RG60_RS02980 PF00970 Oxidoreductase FAD-binding domain RG60_RS02980 PF00042 Globin RG60_RS02980 PF00175 Oxidoreductase NAD-binding domain RG60_RS02990 PF00464 Serine hydroxymethyltransferase RG60_RS02995 PF00480 ROK family RG60_RS03000 PF17128 Domain of unknown function (DUF5107) RG60_RS03000 PF13181 Tetratricopeptide repeat RG60_RS03005 PF13407 Periplasmic binding protein domain RG60_RS03010 PF00005 ABC transporter RG60_RS03015 PF02653 Branched-chain amino acid transport system / permease component RG60_RS03020 PF08240 Alcohol dehydrogenase GroES-like domain RG60_RS03020 PF00107 Zinc-binding dehydrogenase RG60_RS03025 PF01263 Aldose 1-epimerase RG60_RS03030 PF07681 DoxX RG60_RS03035 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG60_RS03035 PF14759 Reductase C-terminal RG60_RS03040 PF00106 short chain dehydrogenase RG60_RS03045 PF00355 Rieske [2Fe-2S] domain RG60_RS03050 PF00866 Ring hydroxylating beta subunit RG60_RS03055 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RG60_RS03055 PF00355 Rieske [2Fe-2S] domain RG60_RS03060 PF03466 LysR substrate binding domain RG60_RS03060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS03065 PF12832 MFS_1 like family RG60_RS03070 PF00874 PRD domain RG60_RS03075 PF12146 Serine aminopeptidase, S33 RG60_RS03080 PF00459 Inositol monophosphatase family RG60_RS03085 PF00588 SpoU rRNA Methylase family RG60_RS03090 PF02082 Transcriptional regulator RG60_RS03095 PF00266 Aminotransferase class-V RG60_RS03100 PF01592 NifU-like N terminal domain RG60_RS03105 PF01521 Iron-sulphur cluster biosynthesis RG60_RS03110 PF07743 HSCB C-terminal oligomerisation domain RG60_RS03115 PF00012 Hsp70 protein RG60_RS03120 PF00111 2Fe-2S iron-sulfur cluster binding domain RG60_RS03125 PF04384 Iron-sulphur cluster assembly RG60_RS03130 PF00883 Cytosol aminopeptidase family, catalytic domain RG60_RS03130 PF12404 Peptidase RG60_RS03135 PF14581 SseB protein C-terminal domain RG60_RS03135 PF07179 SseB protein N-terminal domain RG60_RS03140 PF00581 Rhodanese-like domain RG60_RS03145 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain RG60_RS03145 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain RG60_RS03145 PF11974 Bacterial alpha-2-macroglobulin MG3 domain RG60_RS03145 PF01835 MG2 domain RG60_RS03145 PF00207 Alpha-2-macroglobulin family RG60_RS03145 PF07703 Alpha-2-macroglobulin bait region domain RG60_RS03145 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain RG60_RS03145 PF07678 A-macroglobulin TED domain RG60_RS03145 PF17962 Bacterial macroglobulin domain 6 RG60_RS03150 PF00912 Transglycosylase RG60_RS03150 PF06832 Penicillin-Binding Protein C-terminus Family RG60_RS03150 PF00905 Penicillin binding protein transpeptidase domain RG60_RS03155 PF00334 Nucleoside diphosphate kinase RG60_RS03160 PF04055 Radical SAM superfamily RG60_RS03165 PF13464 Domain of unknown function (DUF4115) RG60_RS03170 PF04551 GcpE protein RG60_RS03175 PF13393 Histidyl-tRNA synthetase RG60_RS03175 PF03129 Anticodon binding domain RG60_RS03180 PF09976 Tetratricopeptide repeat-like domain RG60_RS03185 PF13360 PQQ-like domain RG60_RS03190 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RG60_RS03190 PF01926 50S ribosome-binding GTPase RG60_RS03195 PF07191 zinc-ribbons RG60_RS03200 PF02601 Exonuclease VII, large subunit RG60_RS03200 PF13742 OB-fold nucleic acid binding domain RG60_RS03205 PF00478 IMP dehydrogenase / GMP reductase domain RG60_RS03205 PF00571 CBS domain RG60_RS03210 PF00117 Glutamine amidotransferase class-I RG60_RS03210 PF02540 NAD synthase RG60_RS03210 PF00958 GMP synthase C terminal domain RG60_RS03215 PF17358 Family of unknown function (DUF5384) RG60_RS03220 PF05433 Glycine zipper 2TM domain RG60_RS03230 PF11119 Protein of unknown function (DUF2633) RG60_RS03240 PF00563 EAL domain RG60_RS03240 PF05231 MASE1 RG60_RS03245 PF02541 Ppx/GppA phosphatase family RG60_RS03250 PF02503 Polyphosphate kinase middle domain RG60_RS03250 PF13090 Polyphosphate kinase C-terminal domain 2 RG60_RS03250 PF13089 Polyphosphate kinase N-terminal domain RG60_RS03250 PF17941 Polyphosphate kinase C-terminal domain 1 RG60_RS03255 PF00551 Formyl transferase RG60_RS03260 PF02769 AIR synthase related protein, C-terminal domain RG60_RS03260 PF00586 AIR synthase related protein, N-terminal domain RG60_RS03275 PF00860 Permease family RG60_RS03280 PF00308 Bacterial dnaA protein RG60_RS03285 PF03960 ArsC family RG60_RS03290 PF01435 Peptidase family M48 RG60_RS03295 PF01594 AI-2E family transporter RG60_RS03300 PF01226 Formate/nitrite transporter RG60_RS03305 PF01226 Formate/nitrite transporter RG60_RS03310 PF01590 GAF domain RG60_RS03310 PF00158 Sigma-54 interaction domain RG60_RS03315 PF07450 Formate hydrogenlyase maturation protein HycH RG60_RS03320 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RG60_RS03325 PF12838 4Fe-4S dicluster domain RG60_RS03330 PF00374 Nickel-dependent hydrogenase RG60_RS03330 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RG60_RS03330 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RG60_RS03335 PF00361 Proton-conducting membrane transporter RG60_RS03335 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RG60_RS03340 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RG60_RS03350 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RG60_RS03350 PF00361 Proton-conducting membrane transporter RG60_RS03355 PF00146 NADH dehydrogenase RG60_RS03360 PF00361 Proton-conducting membrane transporter RG60_RS03365 PF00361 Proton-conducting membrane transporter RG60_RS03370 PF00037 4Fe-4S binding domain RG60_RS03370 PF12798 4Fe-4S binding domain RG60_RS03375 PF00578 AhpC/TSA family RG60_RS03380 PF01842 ACT domain RG60_RS03385 PF00701 Dihydrodipicolinate synthetase family RG60_RS03390 PF06804 NlpB/DapX lipoprotein RG60_RS03400 PF01259 SAICAR synthetase RG60_RS03405 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin RG60_RS03410 PF01850 PIN domain RG60_RS03420 PF08351 Domain of unknown function (DUF1726) RG60_RS03420 PF17176 tRNA-binding domain RG60_RS03420 PF05127 Helicase RG60_RS03420 PF13718 GNAT acetyltransferase 2 RG60_RS03425 PF02230 Phospholipase/Carboxylesterase RG60_RS03430 PF13980 Uncharacterised protein family (UPF0370) RG60_RS03435 PF01546 Peptidase family M20/M25/M40 RG60_RS03435 PF07687 Peptidase dimerisation domain RG60_RS03440 PF03960 ArsC family RG60_RS03450 PF00873 AcrB/AcrD/AcrF family RG60_RS03455 PF00672 HAMP domain RG60_RS03455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS03455 PF07730 Histidine kinase RG60_RS03455 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term RG60_RS03460 PF13247 4Fe-4S dicluster domain RG60_RS03460 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RG60_RS03460 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG60_RS03465 PF00293 NUDIX domain RG60_RS03470 PF06674 Protein of unknown function (DUF1176) RG60_RS03475 PF02779 Transketolase, pyrimidine binding domain RG60_RS03475 PF02780 Transketolase, C-terminal domain RG60_RS03475 PF00456 Transketolase, thiamine diphosphate binding domain RG60_RS03480 PF00923 Transaldolase/Fructose-6-phosphate aldolase RG60_RS03485 PF01515 Phosphate acetyl/butaryl transferase RG60_RS03485 PF03949 Malic enzyme, NAD binding domain RG60_RS03485 PF00390 Malic enzyme, N-terminal domain RG60_RS03490 PF00936 BMC domain RG60_RS03495 PF10662 Ethanolamine utilisation - propanediol utilisation RG60_RS03500 PF06249 Ethanolamine utilisation protein EutQ RG60_RS03505 PF01923 Cobalamin adenosyltransferase RG60_RS03510 PF01515 Phosphate acetyl/butaryl transferase RG60_RS03515 PF00936 BMC domain RG60_RS03520 PF03319 Ethanolamine utilisation protein EutN/carboxysome RG60_RS03525 PF00171 Aldehyde dehydrogenase family RG60_RS03535 PF00465 Iron-containing alcohol dehydrogenase RG60_RS03540 PF04346 Ethanolamine utilisation protein, EutH RG60_RS03545 PF06277 Ethanolamine utilisation protein EutA RG60_RS03550 PF06751 Ethanolamine ammonia lyase large subunit (EutB) RG60_RS03555 PF05985 Ethanolamine ammonia-lyase light chain (EutC) RG60_RS03560 PF00936 BMC domain RG60_RS03565 PF16365 Ethanolamine utilization protein EutK C-terminus RG60_RS03565 PF00936 BMC domain RG60_RS03570 PF12833 Helix-turn-helix domain RG60_RS03575 PF01218 Coproporphyrinogen III oxidase RG60_RS03580 PF01520 N-acetylmuramoyl-L-alanine amidase RG60_RS03585 PF00583 Acetyltransferase (GNAT) family RG60_RS03590 PF11143 Protein of unknown function (DUF2919) RG60_RS03595 PF06572 Protein of unknown function (DUF1131) RG60_RS03600 PF04261 Dyp-type peroxidase family RG60_RS03605 PF00144 Beta-lactamase RG60_RS03610 PF00367 phosphotransferase system, EIIB RG60_RS03610 PF02378 Phosphotransferase system, EIIC RG60_RS03615 PF01380 SIS domain RG60_RS03620 PF01418 Helix-turn-helix domain, rpiR family RG60_RS03620 PF01380 SIS domain RG60_RS03635 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS03640 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS03645 PF00005 ABC transporter RG60_RS03650 PF00291 Pyridoxal-phosphate dependent enzyme RG60_RS03655 PF17263 Family of unknown function (DUF5329) RG60_RS03660 PF08543 Phosphomethylpyrimidine kinase RG60_RS03665 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RG60_RS03670 PF02896 PEP-utilising enzyme, TIM barrel domain RG60_RS03670 PF05524 PEP-utilising enzyme, N-terminal RG60_RS03670 PF00391 PEP-utilising enzyme, mobile domain RG60_RS03675 PF00381 PTS HPr component phosphorylation site RG60_RS03680 PF00291 Pyridoxal-phosphate dependent enzyme RG60_RS03695 PF04354 ZipA, C-terminal FtsZ-binding domain RG60_RS03700 PF12826 Helix-hairpin-helix motif RG60_RS03700 PF00533 BRCA1 C Terminus (BRCT) domain RG60_RS03700 PF01653 NAD-dependent DNA ligase adenylation domain RG60_RS03700 PF03120 NAD-dependent DNA ligase OB-fold domain RG60_RS03700 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RG60_RS03705 PF12843 Putative quorum-sensing-regulated virulence factor RG60_RS03710 PF13593 SBF-like CPA transporter family (DUF4137) RG60_RS03715 PF03466 LysR substrate binding domain RG60_RS03715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS03745 PF00749 tRNA synthetases class I (E and Q), catalytic domain RG60_RS03750 PF07037 Putative transcription regulator (DUF1323) RG60_RS03755 PF07037 Putative transcription regulator (DUF1323) RG60_RS03770 PF00563 EAL domain RG60_RS03770 PF05231 MASE1 RG60_RS03775 PF07670 Nucleoside recognition RG60_RS03775 PF01773 Na+ dependent nucleoside transporter N-terminus RG60_RS03775 PF07662 Na+ dependent nucleoside transporter C-terminus RG60_RS03780 PF01566 Natural resistance-associated macrophage protein RG60_RS03790 PF10697 Protein of unknown function (DUF2502) RG60_RS03795 PF00654 Voltage gated chloride channel RG60_RS03800 PF02685 Glucokinase RG60_RS03805 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG60_RS03810 PF02378 Phosphotransferase system, EIIC RG60_RS03815 PF00557 Metallopeptidase family M24 RG60_RS03815 PF01321 Creatinase/Prolidase N-terminal domain RG60_RS03820 PF05343 M42 glutamyl aminopeptidase RG60_RS03825 PF00391 PEP-utilising enzyme, mobile domain RG60_RS03825 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG60_RS03825 PF00381 PTS HPr component phosphorylation site RG60_RS03825 PF02896 PEP-utilising enzyme, TIM barrel domain RG60_RS03825 PF05524 PEP-utilising enzyme, N-terminal RG60_RS03830 PF12833 Helix-turn-helix domain RG60_RS03835 PF04397 LytTr DNA-binding domain RG60_RS03835 PF00072 Response regulator receiver domain RG60_RS03840 PF06580 Histidine kinase RG60_RS03840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS03840 PF07694 5TMR of 5TMR-LYT RG60_RS03845 PF00155 Aminotransferase class I and II RG60_RS03855 PF03279 Bacterial lipid A biosynthesis acyltransferase RG60_RS03860 PF10810 Protein of unknown function (DUF2545) RG60_RS03875 PF10938 YfdX protein RG60_RS03885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RG60_RS03885 PF00205 Thiamine pyrophosphate enzyme, central domain RG60_RS03885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RG60_RS03890 PF03547 Membrane transport protein RG60_RS03895 PF02515 CoA-transferase family III RG60_RS03900 PF01627 Hpt domain RG60_RS03900 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG60_RS03900 PF00072 Response regulator receiver domain RG60_RS03900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS03900 PF00512 His Kinase A (phospho-acceptor) domain RG60_RS03905 PF00072 Response regulator receiver domain RG60_RS03905 PF00196 Bacterial regulatory proteins, luxR family RG60_RS03910 PF00529 HlyD membrane-fusion protein of T1SS RG60_RS03910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG60_RS03915 PF07690 Major Facilitator Superfamily RG60_RS03920 PF00291 Pyridoxal-phosphate dependent enzyme RG60_RS03925 PF02447 GntP family permease RG60_RS03930 PF00356 Bacterial regulatory proteins, lacI family RG60_RS03930 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RG60_RS03935 PF00251 Glycosyl hydrolases family 32 N-terminal domain RG60_RS03935 PF08244 Glycosyl hydrolases family 32 C terminal RG60_RS03940 PF00294 pfkB family carbohydrate kinase RG60_RS03945 PF01306 LacY proton/sugar symporter RG60_RS03960 PF01226 Formate/nitrite transporter RG60_RS03965 PF04333 MlaA lipoprotein RG60_RS03980 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) RG60_RS03990 PF04175 Protein of unknown function (DUF406) RG60_RS03995 PF02803 Thiolase, C-terminal domain RG60_RS03995 PF00108 Thiolase, N-terminal domain RG60_RS04000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RG60_RS04000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RG60_RS04000 PF00378 Enoyl-CoA hydratase/isomerase RG60_RS04005 PF00300 Histidine phosphatase superfamily (branch 1) RG60_RS04010 PF00419 Fimbrial protein RG60_RS04015 PF00577 Outer membrane usher protein RG60_RS04015 PF13953 PapC C-terminal domain RG60_RS04015 PF13954 PapC N-terminal domain RG60_RS04020 PF02753 Pili assembly chaperone PapD, C-terminal domain RG60_RS04020 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG60_RS04025 PF00419 Fimbrial protein RG60_RS04030 PF00419 Fimbrial protein RG60_RS04035 PF00419 Fimbrial protein RG60_RS04040 PF11245 Protein of unknown function (DUF2544) RG60_RS04045 PF01713 Smr domain RG60_RS04050 PF05175 Methyltransferase small domain RG60_RS04055 PF01264 Chorismate synthase RG60_RS04060 PF03411 Penicillin-insensitive murein endopeptidase RG60_RS04065 PF01925 Sulfite exporter TauE/SafE RG60_RS04070 PF04315 Elongation factor P hydroxylase RG60_RS04075 PF08891 YfcL protein RG60_RS04080 PF05430 S-adenosyl-L-methionine-dependent methyltransferase RG60_RS04080 PF01266 FAD dependent oxidoreductase RG60_RS04085 PF00109 Beta-ketoacyl synthase, N-terminal domain RG60_RS04085 PF02801 Beta-ketoacyl synthase, C-terminal domain RG60_RS04095 PF07690 Major Facilitator Superfamily RG60_RS04105 PF01555 DNA methylase RG60_RS04135 PF04984 Phage tail sheath protein subtilisin-like domain RG60_RS04135 PF17482 Phage tail sheath C-terminal domain RG60_RS04165 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RG60_RS04170 PF02413 Caudovirales tail fibre assembly protein, lambda gpK RG60_RS04175 PF03335 Phage tail fibre repeat RG60_RS04175 PF08400 Prophage tail fibre N-terminal RG60_RS04175 PF07484 Phage Tail Collar Domain RG60_RS04175 PF03335 Phage tail fibre repeat RG60_RS04175 PF08400 Prophage tail fibre N-terminal RG60_RS04175 PF07484 Phage Tail Collar Domain RG60_RS04275 PF06406 StbA protein RG60_RS04280 PF05840 Bacteriophage replication gene A protein (GPA) RG60_RS04350 PF02899 Phage integrase, N-terminal SAM-like domain RG60_RS04350 PF00589 Phage integrase family RG60_RS04355 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RG60_RS04355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RG60_RS04355 PF11890 Domain of unknown function (DUF3410) RG60_RS04360 PF02774 Semialdehyde dehydrogenase, dimerisation domain RG60_RS04360 PF01118 Semialdehyde dehydrogenase, NAD binding domain RG60_RS04365 PF01416 tRNA pseudouridine synthase RG60_RS04370 PF09335 SNARE associated Golgi protein RG60_RS04375 PF17848 Acetyl-coA carboxylase zinc finger domain RG60_RS04375 PF01039 Carboxyl transferase domain RG60_RS04380 PF02875 Mur ligase family, glutamate ligase domain RG60_RS04380 PF08245 Mur ligase middle domain RG60_RS04385 PF05036 Sporulation related domain RG60_RS04395 PF02674 Colicin V production protein RG60_RS04400 PF00156 Phosphoribosyl transferase domain RG60_RS04405 PF02441 Flavoprotein RG60_RS04410 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG60_RS04415 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG60_RS04420 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS04425 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS04430 PF00005 ABC transporter RG60_RS04435 PF04754 Putative transposase, YhgA-like RG60_RS04440 PF01370 NAD dependent epimerase/dehydratase family RG60_RS04440 PF08338 Domain of unknown function (DUF1731) RG60_RS04445 PF02152 Dihydroneopterin aldolase RG60_RS04450 PF00043 Glutathione S-transferase, C-terminal domain RG60_RS04450 PF02798 Glutathione S-transferase, N-terminal domain RG60_RS04455 PF14834 Glutathione S-transferase, C-terminal domain RG60_RS04455 PF02798 Glutathione S-transferase, N-terminal domain RG60_RS04460 PF12850 Calcineurin-like phosphoesterase superfamily domain RG60_RS04465 PF00293 NUDIX domain RG60_RS04470 PF03606 C4-dicarboxylate anaerobic carrier RG60_RS04475 PF01515 Phosphate acetyl/butaryl transferase RG60_RS04475 PF07085 DRTGG domain RG60_RS04480 PF00871 Acetokinase family RG60_RS04490 PF04217 Protein of unknown function, DUF412 RG60_RS04495 PF03887 YfbU domain RG60_RS04500 PF13419 Haloacid dehalogenase-like hydrolase RG60_RS04505 PF02080 TrkA-C domain RG60_RS04505 PF03600 Citrate transporter RG60_RS04515 PF00155 Aminotransferase class I and II RG60_RS04525 PF03466 LysR substrate binding domain RG60_RS04525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS04530 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RG60_RS04535 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RG60_RS04540 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RG60_RS04540 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RG60_RS04550 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RG60_RS04550 PF10531 SLBB domain RG60_RS04550 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RG60_RS04555 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RG60_RS04555 PF00384 Molybdopterin oxidoreductase RG60_RS04555 PF01568 Molydopterin dinucleotide binding domain RG60_RS04555 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RG60_RS04560 PF00146 NADH dehydrogenase RG60_RS04565 PF12838 4Fe-4S dicluster domain RG60_RS04570 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RG60_RS04575 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RG60_RS04580 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RG60_RS04580 PF00361 Proton-conducting membrane transporter RG60_RS04585 PF00361 Proton-conducting membrane transporter RG60_RS04590 PF00361 Proton-conducting membrane transporter RG60_RS04595 PF08974 Domain of unknown function (DUF1877) RG60_RS04605 PF02902 Ulp1 protease family, C-terminal catalytic domain RG60_RS04610 PF12706 Beta-lactamase superfamily domain RG60_RS04615 PF13673 Acetyltransferase (GNAT) domain RG60_RS04620 PF05957 Bacterial protein of unknown function (DUF883) RG60_RS04625 PF00425 chorismate binding enzyme RG60_RS04630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RG60_RS04630 PF16582 Middle domain of thiamine pyrophosphate RG60_RS04630 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RG60_RS04635 PF12697 Alpha/beta hydrolase family RG60_RS04640 PF00378 Enoyl-CoA hydratase/isomerase RG60_RS04645 PF13378 Enolase C-terminal domain-like RG60_RS04650 PF13193 AMP-binding enzyme C-terminal domain RG60_RS04650 PF00501 AMP-binding enzyme RG60_RS04665 PF00892 EamA-like transporter family RG60_RS04670 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase RG60_RS04675 PF01522 Polysaccharide deacetylase RG60_RS04680 PF01370 NAD dependent epimerase/dehydratase family RG60_RS04680 PF00551 Formyl transferase RG60_RS04680 PF02911 Formyl transferase, C-terminal domain RG60_RS04685 PF00535 Glycosyl transferase family 2 RG60_RS04690 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RG60_RS04695 PF00300 Histidine phosphatase superfamily (branch 1) RG60_RS04700 PF00293 NUDIX domain RG60_RS04705 PF07437 YfaZ precursor RG60_RS04710 PF00994 Probable molybdopterin binding domain RG60_RS04715 PF03328 HpcH/HpaI aldolase/citrate lyase family RG60_RS04720 PF04754 Putative transposase, YhgA-like RG60_RS04725 PF02754 Cysteine-rich domain RG60_RS04725 PF13183 4Fe-4S dicluster domain RG60_RS04730 PF00890 FAD binding domain RG60_RS04735 PF01266 FAD dependent oxidoreductase RG60_RS04735 PF04324 BFD-like [2Fe-2S] binding domain RG60_RS04740 PF07690 Major Facilitator Superfamily RG60_RS04745 PF03009 Glycerophosphoryl diester phosphodiesterase family RG60_RS04765 PF00111 2Fe-2S iron-sulfur cluster binding domain RG60_RS04770 PF00268 Ribonucleotide reductase, small chain RG60_RS04775 PF03477 ATP cone domain RG60_RS04775 PF02867 Ribonucleotide reductase, barrel domain RG60_RS04775 PF00317 Ribonucleotide reductase, all-alpha domain RG60_RS04785 PF03797 Autotransporter beta-domain RG60_RS04785 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat RG60_RS04785 PF12951 Passenger-associated-transport-repeat RG60_RS04795 PF03989 DNA gyrase C-terminal domain, beta-propeller RG60_RS04795 PF00521 DNA gyrase/topoisomerase IV, subunit A RG60_RS04800 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) RG60_RS04805 PF06672 Protein of unknown function (DUF1175) RG60_RS04810 PF00207 Alpha-2-macroglobulin family RG60_RS04810 PF01835 MG2 domain RG60_RS04810 PF07703 Alpha-2-macroglobulin bait region domain RG60_RS04815 PF10062 Predicted secreted protein (DUF2300) RG60_RS04815 PF08486 Stage II sporulation protein RG60_RS04820 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) RG60_RS04825 PF02803 Thiolase, C-terminal domain RG60_RS04825 PF00108 Thiolase, N-terminal domain RG60_RS04830 PF02667 Short chain fatty acid transporter RG60_RS04835 PF01144 Coenzyme A transferase RG60_RS04840 PF01144 Coenzyme A transferase RG60_RS04845 PF00158 Sigma-54 interaction domain RG60_RS04845 PF00072 Response regulator receiver domain RG60_RS04845 PF02954 Bacterial regulatory protein, Fis family RG60_RS04850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS04850 PF00512 His Kinase A (phospho-acceptor) domain RG60_RS04850 PF00989 PAS fold RG60_RS04855 PF00072 Response regulator receiver domain RG60_RS04855 PF09456 RcsC Alpha-Beta-Loop (ABL) RG60_RS04855 PF00512 His Kinase A (phospho-acceptor) domain RG60_RS04855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS04865 PF00072 Response regulator receiver domain RG60_RS04865 PF00196 Bacterial regulatory proteins, luxR family RG60_RS04870 PF16359 RcsD-ABL domain RG60_RS04870 PF01627 Hpt domain RG60_RS04870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS04885 PF00267 Gram-negative porin RG60_RS04890 PF02424 ApbE family RG60_RS04895 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RG60_RS04895 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RG60_RS04895 PF02805 Metal binding domain of Ada RG60_RS04895 PF12833 Helix-turn-helix domain RG60_RS04900 PF13532 2OG-Fe(II) oxygenase superfamily RG60_RS04905 PF00005 ABC transporter RG60_RS04910 PF06039 Malate:quinone oxidoreductase (Mqo) RG60_RS04915 PF03974 Ecotin RG60_RS04925 PF13187 4Fe-4S dicluster domain RG60_RS04925 PF00037 4Fe-4S binding domain RG60_RS04925 PF12800 4Fe-4S binding domain RG60_RS04930 PF03927 NapD protein RG60_RS04935 PF01568 Molydopterin dinucleotide binding domain RG60_RS04935 PF00384 Molybdopterin oxidoreductase RG60_RS04935 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RG60_RS04940 PF12838 4Fe-4S dicluster domain RG60_RS04940 PF12800 4Fe-4S binding domain RG60_RS04945 PF12801 4Fe-4S binding domain RG60_RS04945 PF13237 4Fe-4S dicluster domain RG60_RS04950 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) RG60_RS04955 PF03264 NapC/NirT cytochrome c family, N-terminal region RG60_RS04960 PF00005 ABC transporter RG60_RS04965 PF03379 CcmB protein RG60_RS04970 PF01578 Cytochrome C assembly protein RG60_RS04975 PF04995 Heme exporter protein D (CcmD) RG60_RS04980 PF03100 CcmE RG60_RS04985 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal RG60_RS04985 PF01578 Cytochrome C assembly protein RG60_RS04990 PF08534 Redoxin RG60_RS04995 PF03918 Cytochrome C biogenesis protein RG60_RS05000 PF00072 Response regulator receiver domain RG60_RS05000 PF00196 Bacterial regulatory proteins, luxR family RG60_RS05010 PF03797 Autotransporter beta-domain RG60_RS05010 PF03212 Pertactin RG60_RS05010 PF16168 Adhesin of bacterial autotransporter system, probable stalk RG60_RS05015 PF16168 Adhesin of bacterial autotransporter system, probable stalk RG60_RS05015 PF03797 Autotransporter beta-domain RG60_RS05015 PF03212 Pertactin RG60_RS05025 PF00884 Sulfatase RG60_RS05025 PF11893 Domain of unknown function (DUF3413) RG60_RS05030 PF07208 Protein of unknown function (DUF1414) RG60_RS05035 PF04245 37-kD nucleoid-associated bacterial protein RG60_RS05040 PF01386 Ribosomal L25p family RG60_RS05045 PF00271 Helicase conserved C-terminal domain RG60_RS05045 PF04851 Type III restriction enzyme, res subunit RG60_RS05055 PF01479 S4 domain RG60_RS05055 PF00849 RNA pseudouridylate synthase RG60_RS05060 PF07690 Major Facilitator Superfamily RG60_RS05070 PF13989 YejG-like protein RG60_RS05075 PF00005 ABC transporter RG60_RS05075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG60_RS05080 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS05080 PF12911 N-terminal TM domain of oligopeptide transport permease C RG60_RS05085 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS05090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG60_RS05095 PF00563 EAL domain RG60_RS05095 PF12792 CSS motif domain associated with EAL RG60_RS05100 PF00877 NlpC/P60 family RG60_RS05105 PF01569 PAP2 superfamily RG60_RS05110 PF02492 CobW/HypB/UreG, nucleotide-binding domain RG60_RS05110 PF07683 Cobalamin synthesis protein cobW C-terminal domain RG60_RS05115 PF08125 Mannitol dehydrogenase C-terminal domain RG60_RS05115 PF01232 Mannitol dehydrogenase Rossmann domain RG60_RS05120 PF08207 Elongation factor P (EF-P) KOW-like domain RG60_RS05120 PF09285 Elongation factor P, C-terminal RG60_RS05120 PF01132 Elongation factor P (EF-P) OB domain RG60_RS05125 PF03692 Putative zinc- or iron-chelating domain RG60_RS05130 PF07690 Major Facilitator Superfamily RG60_RS05135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG60_RS05135 PF00381 PTS HPr component phosphorylation site RG60_RS05140 PF00294 pfkB family carbohydrate kinase RG60_RS05145 PF02378 Phosphotransferase system, EIIC RG60_RS05145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG60_RS05150 PF00294 pfkB family carbohydrate kinase RG60_RS05155 PF04227 Indigoidine synthase A like protein RG60_RS05160 PF01773 Na+ dependent nucleoside transporter N-terminus RG60_RS05160 PF07662 Na+ dependent nucleoside transporter C-terminus RG60_RS05165 PF00027 Cyclic nucleotide-binding domain RG60_RS05170 PF01156 Inosine-uridine preferring nucleoside hydrolase RG60_RS05175 PF07662 Na+ dependent nucleoside transporter C-terminus RG60_RS05175 PF01773 Na+ dependent nucleoside transporter N-terminus RG60_RS05180 PF00294 pfkB family carbohydrate kinase RG60_RS05185 PF01261 Xylose isomerase-like TIM barrel RG60_RS05190 PF03601 Conserved hypothetical protein 698 RG60_RS05195 PF03466 LysR substrate binding domain RG60_RS05195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS05205 PF00324 Amino acid permease RG60_RS05215 PF07715 TonB-dependent Receptor Plug Domain RG60_RS05215 PF00593 TonB dependent receptor RG60_RS05220 PF00756 Putative esterase RG60_RS05230 PF01227 GTP cyclohydrolase I RG60_RS05235 PF04235 Protein of unknown function (DUF418) RG60_RS05245 PF00356 Bacterial regulatory proteins, lacI family RG60_RS05250 PF13407 Periplasmic binding protein domain RG60_RS05255 PF00005 ABC transporter RG60_RS05260 PF02653 Branched-chain amino acid transport system / permease component RG60_RS05265 PF01180 Dihydroorotate dehydrogenase RG60_RS05270 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG60_RS05270 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RG60_RS05275 PF10808 Protein of unknown function (DUF2542) RG60_RS05280 PF02698 DUF218 domain RG60_RS05285 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region RG60_RS05285 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RG60_RS05290 PF04172 LrgB-like family RG60_RS05295 PF03788 LrgA family RG60_RS05300 PF01207 Dihydrouridine synthase (Dus) RG60_RS05320 PF02321 Outer membrane efflux protein RG60_RS05330 PF09335 SNARE associated Golgi protein RG60_RS05335 PF04893 Yip1 domain RG60_RS05340 PF00768 D-alanyl-D-alanine carboxypeptidase RG60_RS05345 PF01565 FAD binding domain RG60_RS05345 PF09330 D-lactate dehydrogenase, membrane binding RG60_RS05350 PF00933 Glycosyl hydrolase family 3 N terminal domain RG60_RS05350 PF14310 Fibronectin type III-like domain RG60_RS05350 PF01915 Glycosyl hydrolase family 3 C-terminal domain RG60_RS05355 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RG60_RS05360 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS05365 PF00005 ABC transporter RG60_RS05370 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS05380 PF13411 MerR HTH family regulatory protein RG60_RS05385 PF06580 Histidine kinase RG60_RS05385 PF07694 5TMR of 5TMR-LYT RG60_RS05390 PF04397 LytTr DNA-binding domain RG60_RS05390 PF00072 Response regulator receiver domain RG60_RS05395 PF07308 Protein of unknown function (DUF1456) RG60_RS05400 PF06998 Protein of unknown function (DUF1307) RG60_RS05405 PF04434 SWIM zinc finger RG60_RS05410 PF05762 VWA domain containing CoxE-like protein RG60_RS05420 PF07728 AAA domain (dynein-related subfamily) RG60_RS05445 PF13569 Domain of unknown function (DUF4132) RG60_RS05450 PF09334 tRNA synthetases class I (M) RG60_RS05450 PF01588 Putative tRNA binding domain RG60_RS05455 PF10609 NUBPL iron-transfer P-loop NTPase RG60_RS05460 PF10836 Protein of unknown function (DUF2574) RG60_RS05470 PF00419 Fimbrial protein RG60_RS05475 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG60_RS05475 PF02753 Pili assembly chaperone PapD, C-terminal domain RG60_RS05480 PF00577 Outer membrane usher protein RG60_RS05480 PF13953 PapC C-terminal domain RG60_RS05480 PF13954 PapC N-terminal domain RG60_RS05485 PF00419 Fimbrial protein RG60_RS05490 PF11776 Nickel/cobalt transporter regulator RG60_RS05495 PF03824 High-affinity nickel-transport protein RG60_RS05500 PF02583 Metal-sensitive transcriptional repressor RG60_RS05505 PF02110 Hydroxyethylthiazole kinase family RG60_RS05510 PF08543 Phosphomethylpyrimidine kinase RG60_RS05515 PF01183 Glycosyl hydrolases family 25 RG60_RS05520 PF00392 Bacterial regulatory proteins, gntR family RG60_RS05520 PF07702 UTRA domain RG60_RS05525 PF00294 pfkB family carbohydrate kinase RG60_RS05530 PF03747 ADP-ribosylglycohydrolase RG60_RS05535 PF03825 Nucleoside H+ symporter RG60_RS05540 PF01791 DeoC/LacD family aldolase RG60_RS05545 PF01548 Transposase RG60_RS05545 PF02371 Transposase IS116/IS110/IS902 family RG60_RS05555 PF01116 Fructose-bisphosphate aldolase class-II RG60_RS05560 PF08013 Tagatose 6 phosphate kinase RG60_RS05565 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG60_RS05570 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG60_RS05575 PF03611 PTS system sugar-specific permease component RG60_RS05580 PF08240 Alcohol dehydrogenase GroES-like domain RG60_RS05580 PF00107 Zinc-binding dehydrogenase RG60_RS05585 PF08220 DeoR-like helix-turn-helix domain RG60_RS05590 PF00781 Diacylglycerol kinase catalytic domain RG60_RS05605 PF16325 Peptidase family U32 C-terminal domain RG60_RS05605 PF01136 Peptidase family U32 RG60_RS05615 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH RG60_RS05620 PF07411 Domain of unknown function (DUF1508) RG60_RS05630 PF00486 Transcriptional regulatory protein, C terminal RG60_RS05630 PF00072 Response regulator receiver domain RG60_RS05635 PF00512 His Kinase A (phospho-acceptor) domain RG60_RS05635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS05635 PF00672 HAMP domain RG60_RS05640 PF07690 Major Facilitator Superfamily RG60_RS05645 PF00873 AcrB/AcrD/AcrF family RG60_RS05650 PF00873 AcrB/AcrD/AcrF family RG60_RS05655 PF13533 Biotin-lipoyl like RG60_RS05670 PF00092 von Willebrand factor type A domain RG60_RS05685 PF00012 Hsp70 protein RG60_RS05690 PF00730 HhH-GPD superfamily base excision DNA repair protein RG60_RS05690 PF06029 AlkA N-terminal domain RG60_RS05695 PF13426 PAS domain RG60_RS05695 PF00990 Diguanylate cyclase, GGDEF domain RG60_RS05695 PF05231 MASE1 RG60_RS05695 PF08448 PAS fold RG60_RS05695 PF00563 EAL domain RG60_RS05695 PF08447 PAS fold RG60_RS05700 PF00485 Phosphoribulokinase / Uridine kinase family RG60_RS05705 PF00692 dUTPase RG60_RS05710 PF05170 AsmA family RG60_RS05720 PF03741 Integral membrane protein TerC family RG60_RS05720 PF00571 CBS domain RG60_RS05720 PF03471 Transporter associated domain RG60_RS05725 PF18412 Outer-membrane lipoprotein Wza C-terminal domain RG60_RS05725 PF10531 SLBB domain RG60_RS05725 PF02563 Polysaccharide biosynthesis/export protein RG60_RS05730 PF01451 Low molecular weight phosphotyrosine protein phosphatase RG60_RS05735 PF02706 Chain length determinant protein RG60_RS05735 PF13807 G-rich domain on putative tyrosine kinase RG60_RS05735 PF13614 AAA domain RG60_RS05740 PF00535 Glycosyl transferase family 2 RG60_RS05745 PF00132 Bacterial transferase hexapeptide (six repeats) RG60_RS05750 PF00534 Glycosyl transferases group 1 RG60_RS05750 PF13439 Glycosyltransferase Family 4 RG60_RS05760 PF00535 Glycosyl transferase family 2 RG60_RS05765 PF00132 Bacterial transferase hexapeptide (six repeats) RG60_RS05770 PF16363 GDP-mannose 4,6 dehydratase RG60_RS05775 PF01370 NAD dependent epimerase/dehydratase family RG60_RS05780 PF00293 NUDIX domain RG60_RS05785 PF13579 Glycosyl transferase 4-like domain RG60_RS05785 PF00534 Glycosyl transferases group 1 RG60_RS05790 PF01050 Mannose-6-phosphate isomerase RG60_RS05790 PF00483 Nucleotidyl transferase RG60_RS05795 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RG60_RS05795 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RG60_RS05795 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RG60_RS05795 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RG60_RS05800 PF02397 Bacterial sugar transferase RG60_RS05810 PF04230 Polysaccharide pyruvyl transferase RG60_RS05815 PF00534 Glycosyl transferases group 1 RG60_RS05815 PF13439 Glycosyltransferase Family 4 RG60_RS05825 PF01370 NAD dependent epimerase/dehydratase family RG60_RS05830 PF00483 Nucleotidyl transferase RG60_RS05850 PF08323 Starch synthase catalytic domain RG60_RS05850 PF00534 Glycosyl transferases group 1 RG60_RS05865 PF00534 Glycosyl transferases group 1 RG60_RS05865 PF13439 Glycosyltransferase Family 4 RG60_RS05870 PF00535 Glycosyl transferase family 2 RG60_RS05875 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain RG60_RS05875 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RG60_RS05880 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RG60_RS05880 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RG60_RS05880 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RG60_RS05885 PF01370 NAD dependent epimerase/dehydratase family RG60_RS05890 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RG60_RS05890 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RG60_RS05890 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RG60_RS05895 PF02706 Chain length determinant protein RG60_RS05900 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RG60_RS05900 PF01502 Phosphoribosyl-AMP cyclohydrolase RG60_RS05905 PF00977 Histidine biosynthesis protein RG60_RS05910 PF00977 Histidine biosynthesis protein RG60_RS05915 PF00117 Glutamine amidotransferase class-I RG60_RS05920 PF08645 Polynucleotide kinase 3 phosphatase RG60_RS05920 PF00475 Imidazoleglycerol-phosphate dehydratase RG60_RS05925 PF00155 Aminotransferase class I and II RG60_RS05930 PF00815 Histidinol dehydrogenase RG60_RS05935 PF08029 HisG, C-terminal domain RG60_RS05935 PF01634 ATP phosphoribosyltransferase RG60_RS05950 PF01370 NAD dependent epimerase/dehydratase family RG60_RS05955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS05955 PF03466 LysR substrate binding domain RG60_RS05960 PF13520 Amino acid permease RG60_RS05965 PF04143 Sulphur transport RG60_RS05970 PF01206 Sulfurtransferase TusA RG60_RS05975 PF00929 Exonuclease RG60_RS05975 PF08411 Exonuclease C-terminal RG60_RS05980 PF07943 Penicillin-binding protein 5, C-terminal domain RG60_RS05980 PF00768 D-alanyl-D-alanine carboxypeptidase RG60_RS05985 PF06445 GyrI-like small molecule binding domain RG60_RS05990 PF04632 Fusaric acid resistance protein family RG60_RS05995 PF02371 Transposase IS116/IS110/IS902 family RG60_RS05995 PF01548 Transposase RG60_RS06000 PF04632 Fusaric acid resistance protein family RG60_RS06005 PF04363 Protein of unknown function (DUF496) RG60_RS06010 PF10662 Ethanolamine utilisation - propanediol utilisation RG60_RS06015 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase RG60_RS06020 PF02654 Cobalamin-5-phosphate synthase RG60_RS06025 PF02277 Phosphoribosyltransferase RG60_RS06030 PF03734 L,D-transpeptidase catalytic domain RG60_RS06030 PF17969 L,D-transpeptidase C-terminal domain RG60_RS06040 PF03466 LysR substrate binding domain RG60_RS06040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS06045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS06045 PF03466 LysR substrate binding domain RG60_RS06055 PF01554 MatE RG60_RS06065 PF01709 Transcriptional regulator RG60_RS06070 PF01048 Phosphorylase superfamily RG60_RS06070 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus RG60_RS06075 PF07690 Major Facilitator Superfamily RG60_RS06075 PF00083 Sugar (and other) transporter RG60_RS06085 PF01527 Transposase RG60_RS06090 PF13333 Integrase core domain RG60_RS06090 PF00665 Integrase core domain RG60_RS06090 PF13276 HTH-like domain RG60_RS06095 PF09134 Invasin, domain 3 RG60_RS06095 PF02369 Bacterial Ig-like domain (group 1) RG60_RS06095 PF11924 Inverse autotransporter, beta-domain RG60_RS06105 PF06167 Glucose-regulated metallo-peptidase M90 RG60_RS06120 PF01292 Prokaryotic cytochrome b561 RG60_RS06125 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment RG60_RS06130 PF01794 Ferric reductase like transmembrane component RG60_RS06135 PF00174 Oxidoreductase molybdopterin binding domain RG60_RS06140 PF00576 HIUase/Transthyretin family RG60_RS06145 PF00486 Transcriptional regulatory protein, C terminal RG60_RS06145 PF00072 Response regulator receiver domain RG60_RS06150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS06150 PF00512 His Kinase A (phospho-acceptor) domain RG60_RS06165 PF00267 Gram-negative porin RG60_RS06180 PF01966 HD domain RG60_RS06185 PF18284 DNA methylase N-terminal domain RG60_RS06185 PF00145 C-5 cytosine-specific DNA methylase RG60_RS06190 PF03852 DNA mismatch endonuclease Vsr RG60_RS06195 PF00892 EamA-like transporter family RG60_RS06200 PF05661 Protein of unknown function (DUF808) RG60_RS06205 PF09926 Uncharacterized small protein (DUF2158) RG60_RS06215 PF17151 Periplasmic sensor domain RG60_RS06215 PF00990 Diguanylate cyclase, GGDEF domain RG60_RS06225 PF10733 Protein of unknown function (DUF2525) RG60_RS06235 PF10781 Dextransucrase DSRB RG60_RS06240 PF00196 Bacterial regulatory proteins, luxR family RG60_RS06245 PF01311 Bacterial export proteins, family 1 RG60_RS06250 PF01313 Bacterial export proteins, family 3 RG60_RS06255 PF00813 FliP family RG60_RS06260 PF04347 Flagellar biosynthesis protein, FliO RG60_RS06265 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RG60_RS06265 PF16973 Flagellar motor switch protein FliN N-terminal RG60_RS06270 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RG60_RS06270 PF02154 Flagellar motor switch protein FliM RG60_RS06275 PF03748 Flagellar basal body-associated protein FliL RG60_RS06280 PF02120 Flagellar hook-length control protein FliK RG60_RS06285 PF02050 Flagellar FliJ protein RG60_RS06290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RG60_RS06290 PF18269 T3SS EscN ATPase C-terminal domain RG60_RS06295 PF02108 Flagellar assembly protein FliH RG60_RS06300 PF01706 FliG C-terminal domain RG60_RS06300 PF14841 FliG middle domain RG60_RS06300 PF14842 FliG N-terminal domain RG60_RS06305 PF01514 Secretory protein of YscJ/FliF family RG60_RS06305 PF08345 Flagellar M-ring protein C-terminal RG60_RS06310 PF02049 Flagellar hook-basal body complex protein FliE RG60_RS06320 PF02586 SOS response associated peptidase (SRAP) RG60_RS06325 PF01206 Sulfurtransferase TusA RG60_RS06330 PF04143 Sulphur transport RG60_RS06340 PF13987 YedD-like protein RG60_RS06345 PF02806 Alpha amylase, C-terminal all-beta domain RG60_RS06345 PF00128 Alpha amylase, catalytic domain RG60_RS06350 PF05400 Flagellar protein FliT RG60_RS06355 PF02561 Flagellar protein FliS RG60_RS06360 PF07195 Flagellar hook-associated protein 2 C-terminus RG60_RS06360 PF02465 Flagellar hook-associated protein 2 N-terminus RG60_RS06365 PF12445 Flagellin protein RG60_RS06365 PF00669 Bacterial flagellin N-terminal helical region RG60_RS06365 PF00700 Bacterial flagellin C-terminal helical region RG60_RS06370 PF04545 Sigma-70, region 4 RG60_RS06370 PF04539 Sigma-70 region 3 RG60_RS06370 PF04542 Sigma-70 region 2 RG60_RS06375 PF02899 Phage integrase, N-terminal SAM-like domain RG60_RS06380 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG60_RS06385 PF00291 Pyridoxal-phosphate dependent enzyme RG60_RS06390 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS06395 PF00005 ABC transporter RG60_RS06400 PF00196 Bacterial regulatory proteins, luxR family RG60_RS06400 PF03472 Autoinducer binding domain RG60_RS06405 PF10769 Protein of unknown function (DUF2594) RG60_RS06415 PF00072 Response regulator receiver domain RG60_RS06415 PF00196 Bacterial regulatory proteins, luxR family RG60_RS06420 PF08459 UvrC Helix-hairpin-helix N-terminal RG60_RS06420 PF01541 GIY-YIG catalytic domain RG60_RS06420 PF02151 UvrB/uvrC motif RG60_RS06425 PF01066 CDP-alcohol phosphatidyltransferase RG60_RS06505 PF00589 Phage integrase family RG60_RS06505 PF02899 Phage integrase, N-terminal SAM-like domain RG60_RS06510 PF00665 Integrase core domain RG60_RS06515 PF01527 Transposase RG60_RS06530 PF12161 HsdM N-terminal domain RG60_RS06530 PF02384 N-6 DNA Methylase RG60_RS06540 PF03695 Uncharacterised protein family (UPF0149) RG60_RS06540 PF02810 SEC-C motif RG60_RS06545 PF18766 SWI2/SNF2 ATPase RG60_RS06545 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) RG60_RS06545 PF11867 Domain of unknown function (DUF3387) RG60_RS06570 PF00140 Sigma-70 factor, region 1.2 RG60_RS06570 PF04542 Sigma-70 region 2 RG60_RS06570 PF04546 Sigma-70, non-essential region RG60_RS06570 PF04545 Sigma-70, region 4 RG60_RS06570 PF04539 Sigma-70 region 3 RG60_RS06570 PF03979 Sigma-70 factor, region 1.1 RG60_RS06575 PF01119 DNA mismatch repair protein, C-terminal domain RG60_RS06575 PF08676 MutL C terminal dimerisation domain RG60_RS06595 PF02810 SEC-C motif RG60_RS06595 PF03695 Uncharacterised protein family (UPF0149) RG60_RS06600 PF03222 Tryptophan/tyrosine permease family RG60_RS06605 PF10678 Protein of unknown function (DUF2492) RG60_RS06610 PF00210 Ferritin-like domain RG60_RS06615 PF13992 YecR-like lipoprotein RG60_RS06625 PF10964 Protein of unknown function (DUF2766) RG60_RS06630 PF00210 Ferritin-like domain RG60_RS06640 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RG60_RS06645 PF00005 ABC transporter RG60_RS06650 PF02653 Branched-chain amino acid transport system / permease component RG60_RS06655 PF02358 Trehalose-phosphatase RG60_RS06660 PF00982 Glycosyltransferase family 20 RG60_RS06665 PF00582 Universal stress protein family RG60_RS06670 PF05247 Flagellar transcriptional activator (FlhD) RG60_RS06675 PF05280 Flagellar transcriptional activator (FlhC) RG60_RS06680 PF01618 MotA/TolQ/ExbB proton channel family RG60_RS06685 PF13677 Membrane MotB of proton-channel complex MotA/MotB RG60_RS06685 PF00691 OmpA family RG60_RS06690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS06690 PF01584 CheW-like domain RG60_RS06690 PF01627 Hpt domain RG60_RS06690 PF02895 Signal transducing histidine kinase, homodimeric domain RG60_RS06690 PF09078 CheY binding RG60_RS06695 PF01584 CheW-like domain RG60_RS06700 PF00672 HAMP domain RG60_RS06700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RG60_RS06700 PF02203 Tar ligand binding domain homologue RG60_RS06705 PF00672 HAMP domain RG60_RS06705 PF02203 Tar ligand binding domain homologue RG60_RS06705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RG60_RS06710 PF03705 CheR methyltransferase, all-alpha domain RG60_RS06710 PF01739 CheR methyltransferase, SAM binding domain RG60_RS06715 PF00072 Response regulator receiver domain RG60_RS06715 PF01339 CheB methylesterase RG60_RS06720 PF00072 Response regulator receiver domain RG60_RS06725 PF04344 Chemotaxis phosphatase, CheZ RG60_RS06730 PF01312 FlhB HrpN YscU SpaS Family RG60_RS06735 PF00771 FHIPEP family RG60_RS06740 PF06366 Flagellar protein FlhE RG60_RS06745 PF07007 Lysozyme inhibitor LprI RG60_RS06750 PF00750 tRNA synthetases class I (R) RG60_RS06750 PF03485 Arginyl tRNA synthetase N terminal domain RG60_RS06750 PF05746 DALR anticodon binding domain RG60_RS06760 PF06185 YecM protein RG60_RS06765 PF03932 CutC family RG60_RS06770 PF03264 NapC/NirT cytochrome c family, N-terminal region RG60_RS06775 PF18364 Molybdopterin oxidoreductase N-terminal domain RG60_RS06775 PF00384 Molybdopterin oxidoreductase RG60_RS06775 PF01568 Molydopterin dinucleotide binding domain RG60_RS06780 PF08003 Protein of unknown function (DUF1698) RG60_RS06785 PF13649 Methyltransferase domain RG60_RS06790 PF01124 MAPEG family RG60_RS06795 PF01904 Protein of unknown function DUF72 RG60_RS06800 PF00857 Isochorismatase family RG60_RS06805 PF01336 OB-fold nucleic acid binding domain RG60_RS06805 PF00152 tRNA synthetases class II (D, K and N) RG60_RS06805 PF02938 GAD domain RG60_RS06810 PF00293 NUDIX domain RG60_RS06815 PF01709 Transcriptional regulator RG60_RS06820 PF02075 Crossover junction endodeoxyribonuclease RuvC RG60_RS06825 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family RG60_RS06835 PF07499 RuvA, C-terminal domain RG60_RS06835 PF01330 RuvA N terminal domain RG60_RS06840 PF17864 RuvB AAA lid domain RG60_RS06840 PF05496 Holliday junction DNA helicase RuvB P-loop domain RG60_RS06840 PF05491 RuvB C-terminal winged helix domain RG60_RS06845 PF00950 ABC 3 transport family RG60_RS06850 PF00005 ABC transporter RG60_RS06855 PF01297 Zinc-uptake complex component A periplasmic RG60_RS06860 PF01476 LysM domain RG60_RS06860 PF01551 Peptidase family M23 RG60_RS06860 PF08525 Opacity-associated protein A N-terminal motif RG60_RS06865 PF03279 Bacterial lipid A biosynthesis acyltransferase RG60_RS06885 PF03459 TOBE domain RG60_RS06885 PF00005 ABC transporter RG60_RS06885 PF17912 MalK OB fold domain RG60_RS06895 PF00132 Bacterial transferase hexapeptide (six repeats) RG60_RS06895 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RG60_RS06905 PF13416 Bacterial extracellular solute-binding protein RG60_RS06910 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS06915 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS06920 PF00128 Alpha amylase, catalytic domain RG60_RS06920 PF16657 Maltogenic Amylase, C-terminal domain RG60_RS06920 PF02903 Alpha amylase, N-terminal ig-like domain RG60_RS06940 PF02887 Pyruvate kinase, alpha/beta domain RG60_RS06940 PF00224 Pyruvate kinase, barrel domain RG60_RS06945 PF01418 Helix-turn-helix domain, rpiR family RG60_RS06945 PF01380 SIS domain RG60_RS06960 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RG60_RS06960 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RG60_RS06965 PF00920 Dehydratase family RG60_RS06970 PF01081 KDPG and KHG aldolase RG60_RS06975 PF02222 ATP-grasp domain RG60_RS06980 PF07130 YebG protein RG60_RS06985 PF13995 YebF-like protein RG60_RS07000 PF04391 Protein of unknown function (DUF533) RG60_RS07010 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain RG60_RS07010 PF00326 Prolyl oligopeptidase family RG60_RS07015 PF00929 Exonuclease RG60_RS07020 PF00795 Carbon-nitrogen hydrolase RG60_RS07025 PF06440 DNA polymerase III, theta subunit RG60_RS07030 PF04234 CopC domain RG60_RS07035 PF05425 Copper resistance protein D RG60_RS07040 PF10709 Protein of unknown function (DUF2511) RG60_RS07050 PF00589 Phage integrase family RG60_RS07050 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain RG60_RS07055 PF07825 Excisionase-like protein RG60_RS07060 PF06688 Protein of unknown function (DUF1187) RG60_RS07070 PF03837 RecT family RG60_RS07075 PF12684 PDDEXK-like domain of unknown function (DUF3799) RG60_RS07075 PF06630 Enterobacterial exodeoxyribonuclease VIII RG60_RS07085 PF04181 Rtr1/RPAP2 family RG60_RS07120 PF06254 Putative bacterial toxin ydaT RG60_RS07125 PF07120 Protein of unknown function (DUF1376) RG60_RS07130 PF01695 IstB-like ATP binding protein RG60_RS07135 PF07789 Protein of unknown function (DUF1627) RG60_RS07160 PF02371 Transposase IS116/IS110/IS902 family RG60_RS07160 PF01548 Transposase RG60_RS07175 PF01848 Hok/gef family RG60_RS07205 PF07102 Protein of unknown function (DUF1364) RG60_RS07240 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase RG60_RS07250 PF04971 Bacteriophage P21 holin S RG60_RS07255 PF07041 Protein of unknown function (DUF1327) RG60_RS07265 PF00959 Phage lysozyme RG60_RS07270 PF03245 Bacteriophage Rz lysis protein RG60_RS07290 PF07471 Phage DNA packaging protein Nu1 RG60_RS07295 PF02413 Caudovirales tail fibre assembly protein, lambda gpK RG60_RS07300 PF02831 gpW RG60_RS07310 PF01343 Peptidase family S49 RG60_RS07320 PF03864 Phage major capsid protein E RG60_RS07360 PF06791 Prophage tail length tape measure protein RG60_RS07390 PF06316 Enterobacterial Ail/Lom protein RG60_RS07395 PF08400 Prophage tail fibre N-terminal RG60_RS07395 PF03335 Phage tail fibre repeat RG60_RS07395 PF07484 Phage Tail Collar Domain RG60_RS07425 PF00149 Calcineurin-like phosphoesterase RG60_RS07430 PF07358 Protein of unknown function (DUF1482) RG60_RS07435 PF07351 Protein of unknown function (DUF1480) RG60_RS07440 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF RG60_RS07440 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF RG60_RS07440 PF01189 16S rRNA methyltransferase RsmB/F RG60_RS07445 PF02470 MlaD protein RG60_RS07450 PF04403 Paraquat-inducible protein A RG60_RS07455 PF13185 GAF domain RG60_RS07460 PF04352 ProQ/FINO family RG60_RS07460 PF17516 ProQ C-terminal domain RG60_RS07465 PF11818 C-terminal domain of tail specific protease (DUF3340) RG60_RS07465 PF00595 PDZ domain RG60_RS07465 PF03572 Peptidase family S41 RG60_RS07465 PF17804 Tail specific protease N-terminal domain RG60_RS07470 PF01435 Peptidase family M48 RG60_RS07475 PF07690 Major Facilitator Superfamily RG60_RS07480 PF01614 Bacterial transcriptional regulator RG60_RS07480 PF09339 IclR helix-turn-helix domain RG60_RS07485 PF13996 YobH-like protein RG60_RS07490 PF13998 MgrB protein RG60_RS07495 PF13974 YebO-like protein RG60_RS07505 PF10736 Protein of unknown function (DUF2627) RG60_RS07510 PF00313 'Cold-shock' DNA-binding domain RG60_RS07515 PF13847 Methyltransferase domain RG60_RS07520 PF02659 Putative manganese efflux pump RG60_RS07530 PF06173 Protein of unknown function (DUF986) RG60_RS07535 PF03613 PTS system mannose/fructose/sorbose family IID component RG60_RS07540 PF03609 PTS system sorbose-specific iic component RG60_RS07545 PF03830 PTS system sorbose subfamily IIB component RG60_RS07545 PF03610 PTS system fructose IIA component RG60_RS07560 PF03471 Transporter associated domain RG60_RS07560 PF03741 Integral membrane protein TerC family RG60_RS07565 PF00563 EAL domain RG60_RS07565 PF12792 CSS motif domain associated with EAL RG60_RS07570 PF03315 Serine dehydratase beta chain RG60_RS07570 PF03313 Serine dehydratase alpha chain RG60_RS07575 PF00293 NUDIX domain RG60_RS07580 PF00425 chorismate binding enzyme RG60_RS07580 PF04715 Anthranilate synthase component I, N terminal region RG60_RS07585 PF03701 Uncharacterised protein family (UPF0181) RG60_RS07590 PF08986 Domain of unknown function (DUF1889) RG60_RS07595 PF01042 Endoribonuclease L-PSP RG60_RS07600 PF04851 Type III restriction enzyme, res subunit RG60_RS07600 PF13307 Helicase C-terminal domain RG60_RS07605 PF00814 Glycoprotease family RG60_RS07610 PF03843 Outer membrane lipoprotein Slp family RG60_RS07615 PF00501 AMP-binding enzyme RG60_RS07615 PF13193 AMP-binding enzyme C-terminal domain RG60_RS07620 PF01612 3'-5' exonuclease RG60_RS07620 PF00570 HRDC domain RG60_RS07625 PF00175 Oxidoreductase NAD-binding domain RG60_RS07625 PF00970 Oxidoreductase FAD-binding domain RG60_RS07625 PF00111 2Fe-2S iron-sulfur cluster binding domain RG60_RS07630 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RG60_RS07630 PF00355 Rieske [2Fe-2S] domain RG60_RS07635 PF02028 BCCT, betaine/carnitine/choline family transporter RG60_RS07640 PF00180 Isocitrate/isopropylmalate dehydrogenase RG60_RS07645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS07645 PF03466 LysR substrate binding domain RG60_RS07650 PF01810 LysE type translocator RG60_RS07655 PF09313 Domain of unknown function (DUF1971) RG60_RS07660 PF08956 Domain of unknown function (DUF1869) RG60_RS07670 PF01797 Transposase IS200 like RG60_RS07675 PF12323 Helix-turn-helix domain RG60_RS07675 PF01385 Probable transposase RG60_RS07675 PF07282 Putative transposase DNA-binding domain RG60_RS07680 PF04226 Transglycosylase associated protein RG60_RS07695 PF13185 GAF domain RG60_RS07695 PF00990 Diguanylate cyclase, GGDEF domain RG60_RS07700 PF03891 Domain of unknown function (DUF333) RG60_RS07705 PF04343 Protein of unknown function, DUF488 RG60_RS07710 PF07690 Major Facilitator Superfamily RG60_RS07715 PF02311 AraC-like ligand binding domain RG60_RS07715 PF12833 Helix-turn-helix domain RG60_RS07730 PF04073 Aminoacyl-tRNA editing domain RG60_RS07735 PF00990 Diguanylate cyclase, GGDEF domain RG60_RS07735 PF17155 Gammaproteobacterial periplasmic sensor domain RG60_RS07740 PF17158 Membrane-associated sensor, integral membrane domain RG60_RS07740 PF00990 Diguanylate cyclase, GGDEF domain RG60_RS07745 PF04285 Protein of unknown function (DUF444) RG60_RS07750 PF08298 PrkA AAA domain RG60_RS07750 PF06798 PrkA serine protein kinase C-terminal domain RG60_RS07755 PF06629 MltA-interacting protein MipA RG60_RS07760 PF00248 Aldo/keto reductase family RG60_RS07765 PF01263 Aldose 1-epimerase RG60_RS07770 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RG60_RS07770 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RG60_RS07775 PF01641 SelR domain RG60_RS07780 PF07023 Protein of unknown function (DUF1315) RG60_RS07785 PF00857 Isochorismatase family RG60_RS07790 PF00710 Asparaginase, N-terminal RG60_RS07790 PF17763 Glutaminase/Asparaginase C-terminal domain RG60_RS07795 PF01343 Peptidase family S49 RG60_RS07800 PF00881 Nitroreductase family RG60_RS07810 PF02769 AIR synthase related protein, C-terminal domain RG60_RS07810 PF00586 AIR synthase related protein, N-terminal domain RG60_RS07815 PF01751 Toprim domain RG60_RS07815 PF01131 DNA topoisomerase RG60_RS07820 PF06889 Protein of unknown function (DUF1266) RG60_RS07825 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RG60_RS07825 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RG60_RS07830 PF07383 Protein of unknown function (DUF1496) RG60_RS07835 PF00293 NUDIX domain RG60_RS07840 PF01066 CDP-alcohol phosphatidyltransferase RG60_RS07845 PF00581 Rhodanese-like domain RG60_RS07850 PF00005 ABC transporter RG60_RS07855 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS07860 PF13416 Bacterial extracellular solute-binding protein RG60_RS07865 PF02627 Carboxymuconolactone decarboxylase family RG60_RS07870 PF09335 SNARE associated Golgi protein RG60_RS07880 PF09335 SNARE associated Golgi protein RG60_RS07885 PF03372 Endonuclease/Exonuclease/phosphatase family RG60_RS07895 PF00202 Aminotransferase class-III RG60_RS07900 PF04958 Arginine N-succinyltransferase beta subunit RG60_RS07905 PF00171 Aldehyde dehydrogenase family RG60_RS07910 PF04996 Succinylarginine dihydrolase RG60_RS07915 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RG60_RS07920 PF07813 LTXXQ motif family protein RG60_RS07925 PF05962 HutD RG60_RS07935 PF02540 NAD synthase RG60_RS07940 PF04355 SmpA / OmlA family RG60_RS07950 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG60_RS07955 PF02378 Phosphotransferase system, EIIC RG60_RS07960 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit RG60_RS07965 PF12833 Helix-turn-helix domain RG60_RS07965 PF07883 Cupin domain RG60_RS07970 PF02056 Family 4 glycosyl hydrolase RG60_RS07970 PF11975 Family 4 glycosyl hydrolase C-terminal domain RG60_RS07975 PF04794 YdjC-like protein RG60_RS07985 PF10729 Cell division activator CedA RG60_RS08000 PF00375 Sodium:dicarboxylate symporter family RG60_RS08005 PF04307 LexA-binding, inner membrane-associated putative hydrolase RG60_RS08010 PF13419 Haloacid dehalogenase-like hydrolase RG60_RS08015 PF14002 YniB-like protein RG60_RS08020 PF03881 Fructosamine kinase RG60_RS08025 PF11080 Endoribonuclease GhoS RG60_RS08030 PF00294 pfkB family carbohydrate kinase RG60_RS08035 PF04338 Protein of unknown function, DUF481 RG60_RS08055 PF02824 TGS domain RG60_RS08055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RG60_RS08055 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RG60_RS08055 PF03129 Anticodon binding domain RG60_RS08060 PF00707 Translation initiation factor IF-3, C-terminal domain RG60_RS08060 PF05198 Translation initiation factor IF-3, N-terminal domain RG60_RS08065 PF01632 Ribosomal protein L35 RG60_RS08070 PF00453 Ribosomal protein L20 RG60_RS08085 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RG60_RS08085 PF01409 tRNA synthetases class II core domain (F) RG60_RS08090 PF01588 Putative tRNA binding domain RG60_RS08090 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RG60_RS08090 PF03483 B3/4 domain RG60_RS08090 PF03484 tRNA synthetase B5 domain RG60_RS08090 PF03147 Ferredoxin-fold anticodon binding domain RG60_RS08095 PF00216 Bacterial DNA-binding protein RG60_RS08100 PF01032 FecCD transport family RG60_RS08105 PF00255 Glutathione peroxidase RG60_RS08110 PF00005 ABC transporter RG60_RS08115 PF00877 NlpC/P60 family RG60_RS08120 PF00563 EAL domain RG60_RS08125 PF02696 Uncharacterized ACR, YdiU/UPF0061 family RG60_RS08130 PF10636 Hemin uptake protein hemP RG60_RS08135 PF00793 DAHP synthetase I family RG60_RS08140 PF03618 Kinase/pyrophosphorylase RG60_RS08145 PF02896 PEP-utilising enzyme, TIM barrel domain RG60_RS08145 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RG60_RS08145 PF00391 PEP-utilising enzyme, mobile domain RG60_RS08150 PF13193 AMP-binding enzyme C-terminal domain RG60_RS08150 PF00501 AMP-binding enzyme RG60_RS08160 PF01494 FAD binding domain RG60_RS08165 PF01012 Electron transfer flavoprotein domain RG60_RS08165 PF00766 Electron transfer flavoprotein FAD-binding domain RG60_RS08170 PF01012 Electron transfer flavoprotein domain RG60_RS08180 PF02311 AraC-like ligand binding domain RG60_RS08180 PF12833 Helix-turn-helix domain RG60_RS08185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RG60_RS08185 PF02770 Acyl-CoA dehydrogenase, middle domain RG60_RS08185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RG60_RS08190 PF01144 Coenzyme A transferase RG60_RS08195 PF01487 Type I 3-dehydroquinase RG60_RS08200 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RG60_RS08200 PF08501 Shikimate dehydrogenase substrate binding domain RG60_RS08205 PF07690 Major Facilitator Superfamily RG60_RS08210 PF07690 Major Facilitator Superfamily RG60_RS08215 PF08965 Domain of unknown function (DUF1870) RG60_RS08225 PF01594 AI-2E family transporter RG60_RS08235 PF13183 4Fe-4S dicluster domain RG60_RS08235 PF02913 FAD linked oxidases, C-terminal domain RG60_RS08235 PF01565 FAD binding domain RG60_RS08240 PF03061 Thioesterase superfamily RG60_RS08245 PF15930 Domain of unknown function RG60_RS08250 PF01521 Iron-sulphur cluster biosynthesis RG60_RS08255 PF01458 Uncharacterized protein family (UPF0051) RG60_RS08260 PF00005 ABC transporter RG60_RS08265 PF01458 Uncharacterized protein family (UPF0051) RG60_RS08270 PF00266 Aminotransferase class-V RG60_RS08275 PF02657 Fe-S metabolism associated domain RG60_RS08280 PF17969 L,D-transpeptidase C-terminal domain RG60_RS08280 PF01476 LysM domain RG60_RS08280 PF03734 L,D-transpeptidase catalytic domain RG60_RS08285 PF04728 Lipoprotein leucine-zipper RG60_RS08290 PF00224 Pyruvate kinase, barrel domain RG60_RS08290 PF02887 Pyruvate kinase, alpha/beta domain RG60_RS08295 PF10965 Protein of unknown function (DUF2767) RG60_RS08300 PF12800 4Fe-4S binding domain RG60_RS08300 PF13247 4Fe-4S dicluster domain RG60_RS08305 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 RG60_RS08305 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain RG60_RS08315 PF13247 4Fe-4S dicluster domain RG60_RS08320 PF01292 Prokaryotic cytochrome b561 RG60_RS08330 PF13454 FAD-NAD(P)-binding RG60_RS08335 PF08803 Putative mono-oxygenase ydhR RG60_RS08350 PF03212 Pertactin RG60_RS08350 PF16168 Adhesin of bacterial autotransporter system, probable stalk RG60_RS08355 PF01554 MatE RG60_RS08360 PF00677 Lumazine binding domain RG60_RS08370 PF07690 Major Facilitator Superfamily RG60_RS08375 PF03466 LysR substrate binding domain RG60_RS08375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS08380 PF00356 Bacterial regulatory proteins, lacI family RG60_RS08395 PF07690 Major Facilitator Superfamily RG60_RS08400 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RG60_RS08400 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RG60_RS08405 PF00877 NlpC/P60 family RG60_RS08410 PF00462 Glutaredoxin RG60_RS08415 PF00271 Helicase conserved C-terminal domain RG60_RS08415 PF08494 DEAD/H associated RG60_RS08415 PF00270 DEAD/DEAH box helicase RG60_RS08420 PF00929 Exonuclease RG60_RS08425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RG60_RS08430 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RG60_RS08435 PF16925 Tetracyclin repressor-like, C-terminal domain RG60_RS08435 PF00440 Bacterial regulatory proteins, tetR family RG60_RS08440 PF06945 Protein of unknown function (DUF1289) RG60_RS08445 PF00248 Aldo/keto reductase family RG60_RS08450 PF00080 Copper/zinc superoxide dismutase (SODC) RG60_RS08455 PF04632 Fusaric acid resistance protein family RG60_RS08460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG60_RS08460 PF00529 HlyD membrane-fusion protein of T1SS RG60_RS08465 PF07869 Protein of unknown function (DUF1656) RG60_RS08470 PF01047 MarR family RG60_RS08475 PF05433 Glycine zipper 2TM domain RG60_RS08480 PF03702 Anhydro-N-acetylmuramic acid kinase RG60_RS08485 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme RG60_RS08490 PF01243 Pyridoxamine 5'-phosphate oxidase RG60_RS08490 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RG60_RS08495 PF00579 tRNA synthetases class I (W and Y) RG60_RS08495 PF01479 S4 domain RG60_RS08500 PF08543 Phosphomethylpyrimidine kinase RG60_RS08505 PF02798 Glutathione S-transferase, N-terminal domain RG60_RS08505 PF00043 Glutathione S-transferase, C-terminal domain RG60_RS08510 PF00854 POT family RG60_RS08520 PF00633 Helix-hairpin-helix motif RG60_RS08520 PF00730 HhH-GPD superfamily base excision DNA repair protein RG60_RS08520 PF10576 Iron-sulfur binding domain of endonuclease III RG60_RS08525 PF02508 Rnf-Nqr subunit, membrane protein RG60_RS08530 PF04205 FMN-binding domain RG60_RS08535 PF03116 NQR2, RnfD, RnfE family RG60_RS08540 PF12838 4Fe-4S dicluster domain RG60_RS08540 PF13375 RnfC Barrel sandwich hybrid domain RG60_RS08540 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RG60_RS08540 PF10531 SLBB domain RG60_RS08545 PF04060 Putative Fe-S cluster RG60_RS08550 PF02508 Rnf-Nqr subunit, membrane protein RG60_RS08555 PF10754 Protein of unknown function (DUF2569) RG60_RS08560 PF05321 Haemolysin expression modulating protein RG60_RS08575 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RG60_RS08575 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RG60_RS08580 PF00962 Adenosine/AMP deaminase RG60_RS08585 PF00155 Aminotransferase class I and II RG60_RS08590 PF00367 phosphotransferase system, EIIB RG60_RS08590 PF02378 Phosphotransferase system, EIIC RG60_RS08595 PF00356 Bacterial regulatory proteins, lacI family RG60_RS08595 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RG60_RS08605 PF00440 Bacterial regulatory proteins, tetR family RG60_RS08610 PF02837 Glycosyl hydrolases family 2, sugar binding domain RG60_RS08610 PF02836 Glycosyl hydrolases family 2, TIM barrel domain RG60_RS08610 PF00703 Glycosyl hydrolases family 2 RG60_RS08620 PF03573 outer membrane porin, OprD family RG60_RS08625 PF06097 Bacterial protein of unknown function (DUF945) RG60_RS08630 PF01238 Phosphomannose isomerase type I RG60_RS08635 PF05681 Fumarate hydratase (Fumerase) RG60_RS08635 PF05683 Fumarase C-terminus RG60_RS08640 PF10415 Fumarase C C-terminus RG60_RS08640 PF00206 Lyase RG60_RS08645 PF05472 DNA replication terminus site-binding protein (Ter protein) RG60_RS08650 PF00512 His Kinase A (phospho-acceptor) domain RG60_RS08650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS08650 PF00672 HAMP domain RG60_RS08655 PF00486 Transcriptional regulatory protein, C terminal RG60_RS08655 PF00072 Response regulator receiver domain RG60_RS08660 PF06942 GlpM protein RG60_RS08670 PF13520 Amino acid permease RG60_RS08680 PF07338 Protein of unknown function (DUF1471) RG60_RS08685 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch RG60_RS08685 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RG60_RS08685 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RG60_RS08690 PF02233 NAD(P) transhydrogenase beta subunit RG60_RS08695 PF01594 AI-2E family transporter RG60_RS08700 PF00893 Small Multidrug Resistance protein RG60_RS08705 PF00893 Small Multidrug Resistance protein RG60_RS08710 PF00089 Trypsin RG60_RS08730 PF07690 Major Facilitator Superfamily RG60_RS08735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS08735 PF03466 LysR substrate binding domain RG60_RS08740 PF00480 ROK family RG60_RS08750 PF00654 Voltage gated chloride channel RG60_RS08755 PF02613 Nitrate reductase delta subunit RG60_RS08760 PF04976 DMSO reductase anchor subunit (DmsC) RG60_RS08765 PF12800 4Fe-4S binding domain RG60_RS08765 PF13247 4Fe-4S dicluster domain RG60_RS08770 PF00384 Molybdopterin oxidoreductase RG60_RS08770 PF01568 Molydopterin dinucleotide binding domain RG60_RS08770 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RG60_RS08775 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RG60_RS08775 PF00384 Molybdopterin oxidoreductase RG60_RS08775 PF01568 Molydopterin dinucleotide binding domain RG60_RS08780 PF06649 Protein of unknown function (DUF1161) RG60_RS08785 PF06788 Uncharacterised protein family (UPF0257) RG60_RS08790 PF13302 Acetyltransferase (GNAT) domain RG60_RS08795 PF06932 Protein of unknown function (DUF1283) RG60_RS08800 PF02694 Uncharacterised BCR, YnfA/UPF0060 family RG60_RS08810 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RG60_RS08810 PF13378 Enolase C-terminal domain-like RG60_RS08815 PF00107 Zinc-binding dehydrogenase RG60_RS08815 PF08240 Alcohol dehydrogenase GroES-like domain RG60_RS08820 PF07690 Major Facilitator Superfamily RG60_RS08820 PF00083 Sugar (and other) transporter RG60_RS08825 PF08125 Mannitol dehydrogenase C-terminal domain RG60_RS08825 PF01232 Mannitol dehydrogenase Rossmann domain RG60_RS08830 PF14001 YdfZ protein RG60_RS08835 PF07729 FCD domain RG60_RS08835 PF00392 Bacterial regulatory proteins, gntR family RG60_RS08840 PF00106 short chain dehydrogenase RG60_RS08850 PF01432 Peptidase family M3 RG60_RS08860 PF02464 Competence-damaged protein RG60_RS08865 PF04076 Bacterial OB fold (BOF) protein RG60_RS08870 PF00990 Diguanylate cyclase, GGDEF domain RG60_RS08880 PF07690 Major Facilitator Superfamily RG60_RS08885 PF00892 EamA-like transporter family RG60_RS08890 PF00392 Bacterial regulatory proteins, gntR family RG60_RS08890 PF07702 UTRA domain RG60_RS08895 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG60_RS08900 PF02378 Phosphotransferase system, EIIC RG60_RS08905 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit RG60_RS08910 PF11471 Maltoporin periplasmic N-terminal extension RG60_RS08910 PF02264 LamB porin RG60_RS08915 PF00232 Glycosyl hydrolase family 1 RG60_RS08920 PF13999 MarB protein RG60_RS08925 PF12833 Helix-turn-helix domain RG60_RS08930 PF01047 MarR family RG60_RS08935 PF01914 MarC family integral membrane protein RG60_RS08940 PF07690 Major Facilitator Superfamily RG60_RS08960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS08960 PF03466 LysR substrate binding domain RG60_RS08965 PF00171 Aldehyde dehydrogenase family RG60_RS08970 PF04960 Glutaminase RG60_RS08975 PF13811 Domain of unknown function (DUF4186) RG60_RS08980 PF00990 Diguanylate cyclase, GGDEF domain RG60_RS08990 PF01232 Mannitol dehydrogenase Rossmann domain RG60_RS08990 PF08125 Mannitol dehydrogenase C-terminal domain RG60_RS09000 PF01062 Bestrophin, RFP-TM, chloride channel RG60_RS09005 PF13649 Methyltransferase domain RG60_RS09010 PF03992 Antibiotic biosynthesis monooxygenase RG60_RS09015 PF01791 DeoC/LacD family aldolase RG60_RS09020 PF13407 Periplasmic binding protein domain RG60_RS09025 PF02653 Branched-chain amino acid transport system / permease component RG60_RS09030 PF02653 Branched-chain amino acid transport system / permease component RG60_RS09035 PF00005 ABC transporter RG60_RS09040 PF04198 Putative sugar-binding domain RG60_RS09045 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG60_RS09045 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RG60_RS09050 PF13018 Extended Signal Peptide of Type V secretion system RG60_RS09055 PF03797 Autotransporter beta-domain RG60_RS09060 PF13657 HipA N-terminal domain RG60_RS09060 PF07804 HipA-like C-terminal domain RG60_RS09060 PF07804 HipA-like C-terminal domain RG60_RS09060 PF13657 HipA N-terminal domain RG60_RS09115 PF05707 Zonular occludens toxin (Zot) RG60_RS09140 PF00577 Outer membrane usher protein RG60_RS09140 PF13954 PapC N-terminal domain RG60_RS09140 PF13953 PapC C-terminal domain RG60_RS09145 PF00419 Fimbrial protein RG60_RS09150 PF00419 Fimbrial protein RG60_RS09155 PF09160 FimH, mannose binding RG60_RS09160 PF00384 Molybdopterin oxidoreductase RG60_RS09165 PF17073 Two-component-system connector protein RG60_RS09175 PF00884 Sulfatase RG60_RS09180 PF04055 Radical SAM superfamily RG60_RS09180 PF13186 Iron-sulfur cluster-binding domain RG60_RS09185 PF00005 ABC transporter RG60_RS09185 PF06472 ABC transporter transmembrane region 2 RG60_RS09190 PF07715 TonB-dependent Receptor Plug Domain RG60_RS09195 PF05193 Peptidase M16 inactive domain RG60_RS09195 PF00675 Insulinase (Peptidase family M16) RG60_RS09205 PF00282 Pyridoxal-dependent decarboxylase conserved domain RG60_RS09210 PF13520 Amino acid permease RG60_RS09215 PF02638 Glycosyl hydrolase-like 10 RG60_RS09220 PF00990 Diguanylate cyclase, GGDEF domain RG60_RS09225 PF00990 Diguanylate cyclase, GGDEF domain RG60_RS09225 PF00563 EAL domain RG60_RS09225 PF13426 PAS domain RG60_RS09230 PF01427 D-ala-D-ala dipeptidase RG60_RS09235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG60_RS09240 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS09245 PF12911 N-terminal TM domain of oligopeptide transport permease C RG60_RS09245 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS09250 PF00005 ABC transporter RG60_RS09250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG60_RS09255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG60_RS09255 PF00005 ABC transporter RG60_RS09260 PF02566 OsmC-like protein RG60_RS09270 PF10684 Putative biofilm-dependent modulation protein RG60_RS09275 PF08136 30S ribosomal protein subunit S22 family RG60_RS09280 PF00390 Malic enzyme, N-terminal domain RG60_RS09280 PF03949 Malic enzyme, NAD binding domain RG60_RS09285 PF00107 Zinc-binding dehydrogenase RG60_RS09285 PF08240 Alcohol dehydrogenase GroES-like domain RG60_RS09290 PF01381 Helix-turn-helix RG60_RS09295 PF01292 Prokaryotic cytochrome b561 RG60_RS09300 PF13247 4Fe-4S dicluster domain RG60_RS09300 PF09163 Formate dehydrogenase N, transmembrane RG60_RS09300 PF12800 4Fe-4S binding domain RG60_RS09310 PF00892 EamA-like transporter family RG60_RS09315 PF00267 Gram-negative porin RG60_RS09325 PF07690 Major Facilitator Superfamily RG60_RS09330 PF00384 Molybdopterin oxidoreductase RG60_RS09330 PF14710 Respiratory nitrate reductase alpha N-terminal RG60_RS09330 PF01568 Molydopterin dinucleotide binding domain RG60_RS09335 PF13247 4Fe-4S dicluster domain RG60_RS09335 PF14711 Respiratory nitrate reductase beta C-terminal RG60_RS09340 PF02613 Nitrate reductase delta subunit RG60_RS09345 PF02665 Nitrate reductase gamma subunit RG60_RS09350 PF02567 Phenazine biosynthesis-like protein RG60_RS09355 PF00797 N-acetyltransferase RG60_RS09360 PF01613 Flavin reductase like domain RG60_RS09365 PF01361 Tautomerase enzyme RG60_RS09390 PF14220 Domain of unknown function (DUF4329) RG60_RS09390 PF03527 RHS protein RG60_RS09390 PF05593 RHS Repeat RG60_RS09395 PF04717 Type VI secretion system, phage-baseplate injector RG60_RS09400 PF17520 Family of unknown function (DUF5445) RG60_RS09405 PF13417 Glutathione S-transferase, N-terminal domain RG60_RS09410 PF00324 Amino acid permease RG60_RS09430 PF00593 TonB dependent receptor RG60_RS09430 PF07715 TonB-dependent Receptor Plug Domain RG60_RS09435 PF07729 FCD domain RG60_RS09435 PF00392 Bacterial regulatory proteins, gntR family RG60_RS09440 PF16884 N-terminal domain of oxidoreductase RG60_RS09440 PF00107 Zinc-binding dehydrogenase RG60_RS09450 PF00583 Acetyltransferase (GNAT) family RG60_RS09455 PF04657 Putative inner membrane exporter, YdcZ RG60_RS09465 PF13333 Integrase core domain RG60_RS09465 PF13276 HTH-like domain RG60_RS09465 PF00665 Integrase core domain RG60_RS09470 PF04657 Putative inner membrane exporter, YdcZ RG60_RS09475 PF10735 Protein of unknown function (DUF2526) RG60_RS09480 PF10753 Toxin GhoT_OrtT RG60_RS09495 PF00132 Bacterial transferase hexapeptide (six repeats) RG60_RS09500 PF00171 Aldehyde dehydrogenase family RG60_RS09505 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS09510 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS09515 PF08402 TOBE domain RG60_RS09515 PF00005 ABC transporter RG60_RS09520 PF13416 Bacterial extracellular solute-binding protein RG60_RS09525 PF00392 Bacterial regulatory proteins, gntR family RG60_RS09525 PF00155 Aminotransferase class I and II RG60_RS09530 PF01381 Helix-turn-helix RG60_RS09530 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system RG60_RS09540 PF10829 Protein of unknown function (DUF2554) RG60_RS09545 PF12392 Collagenase RG60_RS09545 PF01136 Peptidase family U32 RG60_RS09550 PF07883 Cupin domain RG60_RS09550 PF01381 Helix-turn-helix RG60_RS09555 PF03594 Benzoate membrane transport protein RG60_RS09560 PF12323 Helix-turn-helix domain RG60_RS09560 PF01385 Probable transposase RG60_RS09560 PF07282 Putative transposase DNA-binding domain RG60_RS09580 PF11769 Protein of unknown function (DUF3313) RG60_RS09585 PF03848 Tellurite resistance protein TehB RG60_RS09590 PF03595 Voltage-dependent anion channel RG60_RS09595 PF18836 Beta solenoid repeat from YDCK RG60_RS09600 PF13302 Acetyltransferase (GNAT) domain RG60_RS09605 PF04325 Protein of unknown function (DUF465) RG60_RS09615 PF04349 Periplasmic glucan biosynthesis protein, MdoG RG60_RS09625 PF07063 Domain of unknown function (DUF1338) RG60_RS09630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS09630 PF03466 LysR substrate binding domain RG60_RS09635 PF02203 Tar ligand binding domain homologue RG60_RS09635 PF00672 HAMP domain RG60_RS09635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RG60_RS09640 PF01848 Hok/gef family RG60_RS09650 PF01292 Prokaryotic cytochrome b561 RG60_RS09660 PF00171 Aldehyde dehydrogenase family RG60_RS09665 PF02698 DUF218 domain RG60_RS09670 PF00271 Helicase conserved C-terminal domain RG60_RS09670 PF11898 Domain of unknown function (DUF3418) RG60_RS09670 PF04408 Helicase associated domain (HA2) RG60_RS09670 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold RG60_RS09670 PF00270 DEAD/DEAH box helicase RG60_RS09675 PF02525 Flavodoxin-like fold RG60_RS09680 PF00782 Dual specificity phosphatase, catalytic domain RG60_RS09685 PF12147 Putative methyltransferase RG60_RS09685 PF12146 Serine aminopeptidase, S33 RG60_RS09695 PF01066 CDP-alcohol phosphatidyltransferase RG60_RS09700 PF10971 Protein of unknown function (DUF2773) RG60_RS09705 PF00248 Aldo/keto reductase family RG60_RS09710 PF00132 Bacterial transferase hexapeptide (six repeats) RG60_RS09715 PF08223 PaaX-like protein C-terminal domain RG60_RS09715 PF07848 PaaX-like protein RG60_RS09720 PF00501 AMP-binding enzyme RG60_RS09720 PF14535 AMP-binding enzyme C-terminal domain RG60_RS09725 PF00108 Thiolase, N-terminal domain RG60_RS09725 PF02803 Thiolase, C-terminal domain RG60_RS09730 PF03061 Thioesterase superfamily RG60_RS09735 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RG60_RS09735 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain RG60_RS09735 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RG60_RS09740 PF00378 Enoyl-CoA hydratase/isomerase RG60_RS09745 PF00378 Enoyl-CoA hydratase/isomerase RG60_RS09750 PF00970 Oxidoreductase FAD-binding domain RG60_RS09750 PF00175 Oxidoreductase NAD-binding domain RG60_RS09750 PF00111 2Fe-2S iron-sulfur cluster binding domain RG60_RS09755 PF01883 Iron-sulfur cluster assembly protein RG60_RS09760 PF05138 Phenylacetic acid catabolic protein RG60_RS09765 PF06243 Phenylacetic acid degradation B RG60_RS09770 PF05138 Phenylacetic acid catabolic protein RG60_RS09775 PF01575 MaoC like domain RG60_RS09775 PF00171 Aldehyde dehydrogenase family RG60_RS09780 PF07833 Copper amine oxidase N-terminal domain RG60_RS09780 PF02728 Copper amine oxidase, N3 domain RG60_RS09780 PF02727 Copper amine oxidase, N2 domain RG60_RS09780 PF01179 Copper amine oxidase, enzyme domain RG60_RS09785 PF00171 Aldehyde dehydrogenase family RG60_RS09790 PF12833 Helix-turn-helix domain RG60_RS09790 PF14525 AraC-binding-like domain RG60_RS09795 PF07027 Protein of unknown function (DUF1318) RG60_RS09800 PF13617 YnbE-like lipoprotein RG60_RS09805 PF11739 Dicarboxylate transport RG60_RS09810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RG60_RS09810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RG60_RS09815 PF03724 META domain RG60_RS09820 PF03891 Domain of unknown function (DUF333) RG60_RS09825 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg RG60_RS09825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RG60_RS09825 PF10371 Domain of unknown function RG60_RS09825 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II RG60_RS09825 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RG60_RS09830 PF00267 Gram-negative porin RG60_RS09835 PF00582 Universal stress protein family RG60_RS09840 PF01171 PP-loop family RG60_RS09845 PF00271 Helicase conserved C-terminal domain RG60_RS09845 PF00270 DEAD/DEAH box helicase RG60_RS09845 PF03880 DbpA RNA binding domain RG60_RS09855 PF01544 CorA-like Mg2+ transporter protein RG60_RS09860 PF08448 PAS fold RG60_RS09860 PF00990 Diguanylate cyclase, GGDEF domain RG60_RS09865 PF01713 Smr domain RG60_RS09870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS09870 PF03466 LysR substrate binding domain RG60_RS09875 PF07687 Peptidase dimerisation domain RG60_RS09875 PF01546 Peptidase family M20/M25/M40 RG60_RS09880 PF01546 Peptidase family M20/M25/M40 RG60_RS09890 PF03806 AbgT putative transporter family RG60_RS09895 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RG60_RS09895 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RG60_RS09900 PF00325 Bacterial regulatory proteins, crp family RG60_RS09900 PF00027 Cyclic nucleotide-binding domain RG60_RS09905 PF00582 Universal stress protein family RG60_RS09910 PF10749 Protein of unknown function (DUF2534) RG60_RS09915 PF00924 Mechanosensitive ion channel RG60_RS09920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG60_RS09925 PF02677 Epoxyqueuosine reductase QueH RG60_RS09930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS09930 PF03466 LysR substrate binding domain RG60_RS09935 PF12146 Serine aminopeptidase, S33 RG60_RS09940 PF12146 Serine aminopeptidase, S33 RG60_RS09950 PF00246 Zinc carboxypeptidase RG60_RS09955 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RG60_RS09955 PF13378 Enolase C-terminal domain-like RG60_RS09960 PF08534 Redoxin RG60_RS09965 PF18024 Helix-turn-helix domain RG60_RS09965 PF00158 Sigma-54 interaction domain RG60_RS09965 PF13188 PAS domain RG60_RS09970 PF05128 Domain of unknown function (DUF697) RG60_RS09975 PF04317 YcjX-like family, DUF463 RG60_RS09980 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RG60_RS09980 PF00356 Bacterial regulatory proteins, lacI family RG60_RS09985 PF09381 Outer membrane protein G (OmpG) RG60_RS09990 PF17912 MalK OB fold domain RG60_RS09990 PF03459 TOBE domain RG60_RS09990 PF00005 ABC transporter RG60_RS09995 PF13419 Haloacid dehalogenase-like hydrolase RG60_RS10000 PF03632 Glycosyl hydrolase family 65 central catalytic domain RG60_RS10000 PF03636 Glycosyl hydrolase family 65, N-terminal domain RG60_RS10000 PF03633 Glycosyl hydrolase family 65, C-terminal domain RG60_RS10005 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RG60_RS10005 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RG60_RS10010 PF01261 Xylose isomerase-like TIM barrel RG60_RS10015 PF00107 Zinc-binding dehydrogenase RG60_RS10020 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS10025 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS10030 PF01547 Bacterial extracellular solute-binding protein RG60_RS10035 PF00128 Alpha amylase, catalytic domain RG60_RS10040 PF00581 Rhodanese-like domain RG60_RS10045 PF09584 Phage shock protein PspD (Phageshock_PspD) RG60_RS10050 PF04024 PspC domain RG60_RS10055 PF06667 Phage shock protein B RG60_RS10060 PF04012 PspA/IM30 family RG60_RS10065 PF02954 Bacterial regulatory protein, Fis family RG60_RS10065 PF00158 Sigma-54 interaction domain RG60_RS10070 PF00202 Aminotransferase class-III RG60_RS10075 PF01266 FAD dependent oxidoreductase RG60_RS10080 PF00171 Aldehyde dehydrogenase family RG60_RS10090 PF01381 Helix-turn-helix RG60_RS10090 PF07883 Cupin domain RG60_RS10095 PF07722 Peptidase C26 RG60_RS10100 PF00120 Glutamine synthetase, catalytic domain RG60_RS10105 PF00324 Amino acid permease RG60_RS10110 PF10820 Protein of unknown function (DUF2543) RG60_RS10120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG60_RS10125 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS10130 PF12911 N-terminal TM domain of oligopeptide transport permease C RG60_RS10130 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS10135 PF00005 ABC transporter RG60_RS10135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG60_RS10140 PF00005 ABC transporter RG60_RS10145 PF04480 Protein of unknown function (DUF559) RG60_RS10160 PF17876 Cold shock domain RG60_RS10160 PF08206 Ribonuclease B OB domain RG60_RS10160 PF00773 RNB domain RG60_RS10160 PF00575 S1 RNA binding domain RG60_RS10180 PF00455 DeoR C terminal sensor domain RG60_RS10180 PF08220 DeoR-like helix-turn-helix domain RG60_RS10185 PF05433 Glycine zipper 2TM domain RG60_RS10190 PF01253 Translation initiation factor SUI1 RG60_RS10195 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RG60_RS10200 PF18073 Rubredoxin metal binding domain RG60_RS10205 PF06305 Lipopolysaccharide assembly protein A domain RG60_RS10210 PF01569 PAP2 superfamily RG60_RS10215 PF00925 GTP cyclohydrolase II RG60_RS10220 PF00694 Aconitase C-terminal domain RG60_RS10220 PF00330 Aconitase family (aconitate hydratase) RG60_RS10240 PF03466 LysR substrate binding domain RG60_RS10240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS10250 PF01131 DNA topoisomerase RG60_RS10250 PF08272 Topoisomerase I zinc-ribbon-like RG60_RS10250 PF01396 Topoisomerase DNA binding C4 zinc finger RG60_RS10250 PF01751 Toprim domain RG60_RS10255 PF10692 Protein of unknown function (DUF2498) RG60_RS10260 PF01343 Peptidase family S49 RG60_RS10260 PF08496 Peptidase family S49 N-terminal RG60_RS10270 PF00106 short chain dehydrogenase RG60_RS10275 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP RG60_RS10275 PF12557 Cob(I)alamin adenosyltransferase N terminal RG60_RS10280 PF00849 RNA pseudouridylate synthase RG60_RS10280 PF01479 S4 domain RG60_RS10285 PF01300 Telomere recombination RG60_RS10290 PF02811 PHP domain RG60_RS10295 PF08255 Trp-operon Leader Peptide RG60_RS10300 PF04715 Anthranilate synthase component I, N terminal region RG60_RS10300 PF00425 chorismate binding enzyme RG60_RS10305 PF00591 Glycosyl transferase family, a/b domain RG60_RS10305 PF02885 Glycosyl transferase family, helical bundle domain RG60_RS10305 PF00117 Glutamine amidotransferase class-I RG60_RS10310 PF00218 Indole-3-glycerol phosphate synthase RG60_RS10310 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RG60_RS10315 PF00291 Pyridoxal-phosphate dependent enzyme RG60_RS10320 PF00290 Tryptophan synthase alpha chain RG60_RS10325 PF10685 Stress-induced bacterial acidophilic repeat motif RG60_RS10330 PF05974 Domain of unknown function (DUF892) RG60_RS10335 PF05974 Domain of unknown function (DUF892) RG60_RS10340 PF03922 OmpW family RG60_RS10350 PF04279 Intracellular septation protein A RG60_RS10355 PF03061 Thioesterase superfamily RG60_RS10360 PF03544 Gram-negative bacterial TonB protein C-terminal RG60_RS10365 PF03795 YCII-related domain RG60_RS10370 PF02254 TrkA-N domain RG60_RS10370 PF07885 Ion channel RG60_RS10380 PF13396 Phospholipase_D-nuclease N-terminal RG60_RS10380 PF13091 PLD-like domain RG60_RS10385 PF04269 Protein of unknown function, DUF440 RG60_RS10390 PF00005 ABC transporter RG60_RS10390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG60_RS10395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG60_RS10395 PF00005 ABC transporter RG60_RS10400 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS10400 PF12911 N-terminal TM domain of oligopeptide transport permease C RG60_RS10405 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS10410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG60_RS10420 PF01914 MarC family integral membrane protein RG60_RS10425 PF00171 Aldehyde dehydrogenase family RG60_RS10425 PF00465 Iron-containing alcohol dehydrogenase RG60_RS10430 PF00265 Thymidine kinase RG60_RS10435 PF00816 H-NS histone family RG60_RS10440 PF00483 Nucleotidyl transferase RG60_RS10445 PF00072 Response regulator receiver domain RG60_RS10450 PF01734 Patatin-like phospholipase RG60_RS10455 PF02810 SEC-C motif RG60_RS10460 PF01842 ACT domain RG60_RS10460 PF00551 Formyl transferase RG60_RS10485 PF02665 Nitrate reductase gamma subunit RG60_RS10490 PF02613 Nitrate reductase delta subunit RG60_RS10495 PF14711 Respiratory nitrate reductase beta C-terminal RG60_RS10495 PF13247 4Fe-4S dicluster domain RG60_RS10500 PF00384 Molybdopterin oxidoreductase RG60_RS10500 PF14710 Respiratory nitrate reductase alpha N-terminal RG60_RS10500 PF01568 Molydopterin dinucleotide binding domain RG60_RS10505 PF07690 Major Facilitator Superfamily RG60_RS10515 PF07730 Histidine kinase RG60_RS10515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS10515 PF00672 HAMP domain RG60_RS10515 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term RG60_RS10520 PF00072 Response regulator receiver domain RG60_RS10520 PF00196 Bacterial regulatory proteins, luxR family RG60_RS10525 PF11924 Inverse autotransporter, beta-domain RG60_RS10530 PF02635 DsrE/DsrF-like family RG60_RS10535 PF04752 ChaC-like protein RG60_RS10540 PF06150 ChaB RG60_RS10545 PF01699 Sodium/calcium exchanger protein RG60_RS10555 PF13940 Toxin Ldr, type I toxin-antitoxin system RG60_RS10560 PF13940 Toxin Ldr, type I toxin-antitoxin system RG60_RS10570 PF13940 Toxin Ldr, type I toxin-antitoxin system RG60_RS10575 PF00793 DAHP synthetase I family RG60_RS10580 PF13369 Transglutaminase-like superfamily RG60_RS10585 PF04247 Invasion gene expression up-regulator, SirB RG60_RS10590 PF13847 Methyltransferase domain RG60_RS10590 PF17827 PrmC N-terminal domain RG60_RS10595 PF03462 PCRF domain RG60_RS10595 PF00472 RF-1 domain RG60_RS10600 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain RG60_RS10600 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain RG60_RS10600 PF01488 Shikimate / quinate 5-dehydrogenase RG60_RS10605 PF03550 Outer membrane lipoprotein LolB RG60_RS10610 PF08544 GHMP kinases C terminal RG60_RS10610 PF00288 GHMP kinases N terminal domain RG60_RS10615 PF14572 Phosphoribosyl synthetase-associated domain RG60_RS10615 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RG60_RS10620 PF01740 STAS domain RG60_RS10620 PF00916 Sulfate permease family RG60_RS10625 PF10762 Protein of unknown function (DUF2583) RG60_RS10630 PF01195 Peptidyl-tRNA hydrolase RG60_RS10635 PF01926 50S ribosome-binding GTPase RG60_RS10635 PF06071 Protein of unknown function (DUF933) RG60_RS10650 PF03212 Pertactin RG60_RS10650 PF03797 Autotransporter beta-domain RG60_RS10655 PF02954 Bacterial regulatory protein, Fis family RG60_RS10655 PF00158 Sigma-54 interaction domain RG60_RS10655 PF00989 PAS fold RG60_RS10660 PF02733 Dak1 domain RG60_RS10665 PF02734 DAK2 domain RG60_RS10670 PF03610 PTS system fructose IIA component RG60_RS10670 PF05524 PEP-utilising enzyme, N-terminal RG60_RS10670 PF00391 PEP-utilising enzyme, mobile domain RG60_RS10670 PF00381 PTS HPr component phosphorylation site RG60_RS10680 PF01204 Trehalase RG60_RS10690 PF04226 Transglycosylase associated protein RG60_RS10695 PF07238 PilZ domain RG60_RS10695 PF07317 Flagellar regulator YcgR RG60_RS10700 PF01464 Transglycosylase SLT domain RG60_RS10710 PF17676 LD-carboxypeptidase C-terminal domain RG60_RS10710 PF02016 LD-carboxypeptidase N-terminal domain RG60_RS10715 PF03471 Transporter associated domain RG60_RS10715 PF00999 Sodium/hydrogen exchanger family RG60_RS10715 PF02080 TrkA-C domain RG60_RS10730 PF13333 Integrase core domain RG60_RS10730 PF00665 Integrase core domain RG60_RS10730 PF13276 HTH-like domain RG60_RS10735 PF01168 Alanine racemase, N-terminal domain RG60_RS10735 PF00842 Alanine racemase, C-terminal domain RG60_RS10740 PF01266 FAD dependent oxidoreductase RG60_RS10745 PF04293 SpoVR like protein RG60_RS10750 PF07840 FadR C-terminal domain RG60_RS10750 PF00392 Bacterial regulatory proteins, gntR family RG60_RS10755 PF06450 Bacterial Na+/H+ antiporter B (NhaB) RG60_RS10760 PF02600 Disulfide bond formation protein DsbB RG60_RS10765 PF11798 IMS family HHH motif RG60_RS10765 PF11799 impB/mucB/samB family C-terminal domain RG60_RS10765 PF13438 Domain of unknown function (DUF4113) RG60_RS10765 PF00817 impB/mucB/samB family RG60_RS10770 PF00717 Peptidase S24-like RG60_RS10775 PF06109 Haemolysin E (HlyE) RG60_RS10785 PF03692 Putative zinc- or iron-chelating domain RG60_RS10790 PF01557 Fumarylacetoacetate (FAA) hydrolase family RG60_RS10795 PF05166 YcgL domain RG60_RS10800 PF04151 Bacterial pre-peptidase C-terminal domain RG60_RS10805 PF05666 Fels-1 Prophage Protein-like RG60_RS10815 PF03775 Septum formation inhibitor MinC, C-terminal domain RG60_RS10815 PF05209 Septum formation inhibitor MinC, N-terminal domain RG60_RS10820 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RG60_RS10825 PF03776 Septum formation topological specificity factor MinE RG60_RS10835 PF03797 Autotransporter beta-domain RG60_RS10855 PF13436 Glycine-zipper domain RG60_RS10860 PF16456 YmgD protein RG60_RS10865 PF03797 Autotransporter beta-domain RG60_RS10880 PF12792 CSS motif domain associated with EAL RG60_RS10880 PF00563 EAL domain RG60_RS10890 PF10798 Biofilm development protein YmgB/AriR RG60_RS10900 PF10798 Biofilm development protein YmgB/AriR RG60_RS10905 PF04940 Sensors of blue-light using FAD RG60_RS10905 PF00563 EAL domain RG60_RS10910 PF13411 MerR HTH family regulatory protein RG60_RS10915 PF07166 Protein of unknown function (DUF1398) RG60_RS10930 PF00180 Isocitrate/isopropylmalate dehydrogenase RG60_RS10935 PF00849 RNA pseudouridylate synthase RG60_RS10940 PF00293 NUDIX domain RG60_RS10950 PF04356 Protein of unknown function (DUF489) RG60_RS10955 PF00206 Lyase RG60_RS10955 PF08328 Adenylosuccinate lyase C-terminal RG60_RS10960 PF00486 Transcriptional regulatory protein, C terminal RG60_RS10960 PF00072 Response regulator receiver domain RG60_RS10965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS10965 PF08918 PhoQ Sensor RG60_RS10970 PF08007 Cupin superfamily protein RG60_RS10975 PF07687 Peptidase dimerisation domain RG60_RS10975 PF01546 Peptidase family M20/M25/M40 RG60_RS10985 PF08402 TOBE domain RG60_RS10985 PF00005 ABC transporter RG60_RS10990 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS10995 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS11000 PF13416 Bacterial extracellular solute-binding protein RG60_RS11005 PF12158 Protein of unknown function (DUF3592) RG60_RS11010 PF04536 TPM domain RG60_RS11015 PF02146 Sir2 family RG60_RS11020 PF00480 ROK family RG60_RS11025 PF12704 MacB-like periplasmic core domain RG60_RS11025 PF02687 FtsX-like permease family RG60_RS11030 PF00005 ABC transporter RG60_RS11035 PF12704 MacB-like periplasmic core domain RG60_RS11035 PF02687 FtsX-like permease family RG60_RS11040 PF01757 Acyltransferase family RG60_RS11045 PF00271 Helicase conserved C-terminal domain RG60_RS11045 PF17757 UvrB interaction domain RG60_RS11045 PF02559 CarD-like/TRCF domain RG60_RS11045 PF00270 DEAD/DEAH box helicase RG60_RS11045 PF03461 TRCF domain RG60_RS11050 PF01476 LysM domain RG60_RS11050 PF17969 L,D-transpeptidase C-terminal domain RG60_RS11050 PF03734 L,D-transpeptidase catalytic domain RG60_RS11055 PF07338 Protein of unknown function (DUF1471) RG60_RS11060 PF00440 Bacterial regulatory proteins, tetR family RG60_RS11065 PF05433 Glycine zipper 2TM domain RG60_RS11075 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG60_RS11085 PF05728 Uncharacterised protein family (UPF0227) RG60_RS11090 PF00933 Glycosyl hydrolase family 3 N terminal domain RG60_RS11095 PF01636 Phosphotransferase enzyme family RG60_RS11100 PF13036 Peptidoglycan-synthase activator LpoB RG60_RS11105 PF07233 Protein of unknown function (DUF1425) RG60_RS11110 PF01230 HIT domain RG60_RS11115 PF00593 TonB dependent receptor RG60_RS11115 PF07715 TonB-dependent Receptor Plug Domain RG60_RS11120 PF00367 phosphotransferase system, EIIB RG60_RS11120 PF02378 Phosphotransferase system, EIIC RG60_RS11125 PF01026 TatD related DNase RG60_RS11130 PF09115 DNA polymerase III, delta subunit, C terminal RG60_RS11135 PF02223 Thymidylate kinase RG60_RS11140 PF02618 YceG-like family RG60_RS11145 PF01063 Amino-transferase class IV RG60_RS11150 PF00109 Beta-ketoacyl synthase, N-terminal domain RG60_RS11150 PF02801 Beta-ketoacyl synthase, C-terminal domain RG60_RS11155 PF00550 Phosphopantetheine attachment site RG60_RS11165 PF00698 Acyl transferase domain RG60_RS11170 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RG60_RS11170 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RG60_RS11175 PF02504 Fatty acid synthesis protein RG60_RS11180 PF01783 Ribosomal L32p protein family RG60_RS11185 PF02620 Large ribosomal RNA subunit accumulation protein YceD RG60_RS11190 PF02545 Maf-like protein RG60_RS11195 PF01479 S4 domain RG60_RS11195 PF00849 RNA pseudouridylate synthase RG60_RS11205 PF00575 S1 RNA binding domain RG60_RS11205 PF10150 Ribonuclease E/G family RG60_RS11205 PF12111 Polyribonucleotide phosphorylase C terminal RG60_RS11210 PF00669 Bacterial flagellin N-terminal helical region RG60_RS11215 PF00460 Flagella basal body rod protein RG60_RS11215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RG60_RS11220 PF10135 Rod binding protein RG60_RS11220 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RG60_RS11225 PF02119 Flagellar P-ring protein RG60_RS11230 PF02107 Flagellar L-ring protein RG60_RS11235 PF00460 Flagella basal body rod protein RG60_RS11235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RG60_RS11240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RG60_RS11240 PF00460 Flagella basal body rod protein RG60_RS11245 PF07559 Flagellar basal body protein FlaE RG60_RS11245 PF00460 Flagella basal body rod protein RG60_RS11245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RG60_RS11250 PF13861 FlgD Tudor-like domain RG60_RS11250 PF03963 Flagellar hook capping protein - N-terminal region RG60_RS11250 PF13860 FlgD Ig-like domain RG60_RS11255 PF00460 Flagella basal body rod protein RG60_RS11255 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RG60_RS11260 PF00460 Flagella basal body rod protein RG60_RS11265 PF13144 Chaperone for flagella basal body P-ring formation RG60_RS11270 PF04316 Anti-sigma-28 factor, FlgM RG60_RS11275 PF05130 FlgN protein RG60_RS11280 PF03023 Lipid II flippase MurJ RG60_RS11285 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RG60_RS11290 PF04337 Protein of unknown function, DUF480 RG60_RS11295 PF13302 Acetyltransferase (GNAT) domain RG60_RS11300 PF07690 Major Facilitator Superfamily RG60_RS11305 PF13417 Glutathione S-transferase, N-terminal domain RG60_RS11305 PF04399 Glutaredoxin 2, C terminal domain RG60_RS11310 PF07273 Protein of unknown function (DUF1439) RG60_RS11315 PF01979 Amidohydrolase family RG60_RS11320 PF06183 DinI-like family RG60_RS11325 PF13991 BssS protein family RG60_RS11330 PF01266 FAD dependent oxidoreductase RG60_RS11335 PF10968 Protein of unknown function (DUF2770) RG60_RS11345 PF01292 Prokaryotic cytochrome b561 RG60_RS11350 PF04264 YceI-like domain RG60_RS11355 PF12368 Rhodanase C-terminal RG60_RS11355 PF17773 UPF0176 acylphosphatase like domain RG60_RS11355 PF00581 Rhodanese-like domain RG60_RS11360 PF03279 Bacterial lipid A biosynthesis acyltransferase RG60_RS11365 PF07690 Major Facilitator Superfamily RG60_RS11375 PF13984 MsyB protein RG60_RS11380 PF07119 Protein of unknown function (DUF1375) RG60_RS11385 PF00535 Glycosyl transferase family 2 RG60_RS11390 PF04349 Periplasmic glucan biosynthesis protein, MdoG RG60_RS11395 PF01757 Acyltransferase family RG60_RS11400 PF13091 PLD-like domain RG60_RS11405 PF01661 Macro domain RG60_RS11415 PF10610 Thin aggregative fimbriae synthesis protein RG60_RS11420 PF07012 Curlin associated repeat RG60_RS11425 PF07012 Curlin associated repeat RG60_RS11440 PF00196 Bacterial regulatory proteins, luxR family RG60_RS11445 PF10627 Curli assembly protein CsgE RG60_RS11450 PF10614 Type VIII secretion system (T8SS), CsgF protein RG60_RS11455 PF03783 Curli production assembly/transport component CsgG RG60_RS11460 PF06496 Protein of unknown function (DUF1097) RG60_RS11465 PF02613 Nitrate reductase delta subunit RG60_RS11470 PF02811 PHP domain RG60_RS11475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RG60_RS11500 PF01527 Transposase RG60_RS11505 PF13276 HTH-like domain RG60_RS11505 PF13333 Integrase core domain RG60_RS11505 PF00665 Integrase core domain RG60_RS11510 PF00990 Diguanylate cyclase, GGDEF domain RG60_RS11510 PF17158 Membrane-associated sensor, integral membrane domain RG60_RS11520 PF01522 Polysaccharide deacetylase RG60_RS11520 PF14883 Hypothetical glycosyl hydrolase family 13 RG60_RS11525 PF00535 Glycosyl transferase family 2 RG60_RS11530 PF13994 PgaD-like protein RG60_RS11535 PF02562 PhoH-like protein RG60_RS11545 PF04261 Dyp-type peroxidase family RG60_RS11550 PF09375 Imelysin RG60_RS11550 PF13473 Cupredoxin-like domain RG60_RS11555 PF03239 Iron permease FTR1 family RG60_RS11565 PF00474 Sodium:solute symporter family RG60_RS11580 PF18327 Proline utilization A proline dehydrogenase N-terminal domain RG60_RS11580 PF14850 DNA-binding domain of Proline dehydrogenase RG60_RS11580 PF00171 Aldehyde dehydrogenase family RG60_RS11580 PF01619 Proline dehydrogenase RG60_RS11585 PF00440 Bacterial regulatory proteins, tetR family RG60_RS11585 PF08362 YcdC-like protein, C-terminal region RG60_RS11590 PF00296 Luciferase-like monooxygenase RG60_RS11595 PF00857 Isochorismatase family RG60_RS11600 PF01042 Endoribonuclease L-PSP RG60_RS11605 PF12697 Alpha/beta hydrolase family RG60_RS11610 PF00881 Nitroreductase family RG60_RS11615 PF01613 Flavin reductase like domain RG60_RS11620 PF00860 Permease family RG60_RS11625 PF10685 Stress-induced bacterial acidophilic repeat motif RG60_RS11635 PF00239 Resolvase, N terminal domain RG60_RS11635 PF02796 Helix-turn-helix domain of resolvase RG60_RS11685 PF13408 Recombinase zinc beta ribbon domain RG60_RS11685 PF07508 Recombinase RG60_RS11685 PF00239 Resolvase, N terminal domain RG60_RS11690 PF03358 NADPH-dependent FMN reductase RG60_RS11695 PF13993 YccJ-like protein RG60_RS11700 PF00328 Histidine phosphatase superfamily (branch 2) RG60_RS11710 PF01556 DnaJ C terminal domain RG60_RS11710 PF00226 DnaJ domain RG60_RS11720 PF02613 Nitrate reductase delta subunit RG60_RS11725 PF18364 Molybdopterin oxidoreductase N-terminal domain RG60_RS11725 PF01568 Molydopterin dinucleotide binding domain RG60_RS11725 PF00384 Molybdopterin oxidoreductase RG60_RS11730 PF03264 NapC/NirT cytochrome c family, N-terminal region RG60_RS11735 PF00486 Transcriptional regulatory protein, C terminal RG60_RS11735 PF00072 Response regulator receiver domain RG60_RS11740 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RG60_RS11750 PF12801 4Fe-4S binding domain RG60_RS11755 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system RG60_RS11760 PF15939 Putative antitoxin of bacterial toxin-antitoxin system RG60_RS11770 PF00313 'Cold-shock' DNA-binding domain RG60_RS11775 PF00313 'Cold-shock' DNA-binding domain RG60_RS11785 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF RG60_RS11790 PF06251 Capsule biosynthesis GfcC RG60_RS11795 PF06082 Exopolysaccharide biosynthesis protein YbjH RG60_RS11805 PF01451 Low molecular weight phosphotyrosine protein phosphatase RG60_RS11810 PF13807 G-rich domain on putative tyrosine kinase RG60_RS11810 PF02706 Chain length determinant protein RG60_RS11810 PF13614 AAA domain RG60_RS11815 PF00328 Histidine phosphatase superfamily (branch 2) RG60_RS11820 PF08173 Membrane bound YbgT-like protein RG60_RS11825 PF02322 Cytochrome bd terminal oxidase subunit II RG60_RS11830 PF01654 Cytochrome bd terminal oxidase subunit I RG60_RS11835 PF04809 HupH hydrogenase expression protein, C-terminal conserved region RG60_RS11840 PF07449 Hydrogenase-1 expression protein HyaE RG60_RS11845 PF01750 Hydrogenase maturation protease RG60_RS11850 PF01292 Prokaryotic cytochrome b561 RG60_RS11855 PF00374 Nickel-dependent hydrogenase RG60_RS11860 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal RG60_RS11860 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RG60_RS11885 PF07484 Phage Tail Collar Domain RG60_RS11885 PF03335 Phage tail fibre repeat RG60_RS11885 PF08400 Prophage tail fibre N-terminal RG60_RS11890 PF06316 Enterobacterial Ail/Lom protein RG60_RS11970 PF04860 Phage portal protein RG60_RS12045 PF05866 Endodeoxyribonuclease RusA RG60_RS12050 PF06147 Protein of unknown function (DUF968) RG60_RS12065 PF01848 Hok/gef family RG60_RS12125 PF01381 Helix-turn-helix RG60_RS12160 PF05358 DicB protein RG60_RS12165 PF07358 Protein of unknown function (DUF1482) RG60_RS12185 PF01027 Inhibitor of apoptosis-promoting Bax1 RG60_RS12190 PF04358 DsrC like protein RG60_RS12195 PF00708 Acylphosphatase RG60_RS12200 PF17785 PUA-like domain RG60_RS12200 PF10672 S-adenosylmethionine-dependent methyltransferase RG60_RS12205 PF08755 Hemimethylated DNA-binding protein YccV like RG60_RS12210 PF13380 CoA binding domain RG60_RS12220 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) RG60_RS12225 PF02142 MGS-like domain RG60_RS12230 PF12462 DNA helicase IV / RNA helicase N terminal RG60_RS12230 PF13361 UvrD-like helicase C-terminal domain RG60_RS12230 PF00580 UvrD/REP helicase N-terminal domain RG60_RS12235 PF03733 Inner membrane component domain RG60_RS12240 PF12805 FUSC-like inner membrane protein yccS RG60_RS12245 PF04993 TfoX N-terminal domain RG60_RS12245 PF04994 TfoX C-terminal domain RG60_RS12250 PF03846 Cell division inhibitor SulA RG60_RS12260 PF01389 OmpA-like transmembrane domain RG60_RS12260 PF00691 OmpA family RG60_RS12265 PF06303 MatP N-terminal domain RG60_RS12265 PF17414 MatP C-terminal ribbon-helix-helix domain RG60_RS12270 PF05362 Lon protease (S16) C-terminal proteolytic domain RG60_RS12270 PF13654 AAA domain RG60_RS12275 PF07977 FabA-like domain RG60_RS12280 PF04957 Ribosome modulation factor RG60_RS12285 PF03886 ABC-type transport auxiliary lipoprotein component RG60_RS12290 PF02470 MlaD protein RG60_RS12295 PF04403 Paraquat-inducible protein A RG60_RS12300 PF00005 ABC transporter RG60_RS12300 PF12848 ABC transporter RG60_RS12300 PF16326 ABC transporter C-terminal domain RG60_RS12305 PF10672 S-adenosylmethionine-dependent methyltransferase RG60_RS12305 PF02926 THUMP domain RG60_RS12305 PF01170 Putative RNA methylase family UPF0020 RG60_RS12310 PF00111 2Fe-2S iron-sulfur cluster binding domain RG60_RS12310 PF03476 MOSC N-terminal beta barrel domain RG60_RS12310 PF03473 MOSC domain RG60_RS12315 PF07126 Cell-division protein ZapC RG60_RS12320 PF01180 Dihydroorotate dehydrogenase RG60_RS12325 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG60_RS12325 PF02753 Pili assembly chaperone PapD, C-terminal domain RG60_RS12330 PF00419 Fimbrial protein RG60_RS12335 PF00419 Fimbrial protein RG60_RS12340 PF00419 Fimbrial protein RG60_RS12345 PF13953 PapC C-terminal domain RG60_RS12345 PF13954 PapC N-terminal domain RG60_RS12345 PF00577 Outer membrane usher protein RG60_RS12350 PF02753 Pili assembly chaperone PapD, C-terminal domain RG60_RS12350 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG60_RS12355 PF00419 Fimbrial protein RG60_RS12365 PF03358 NADPH-dependent FMN reductase RG60_RS12370 PF09084 NMT1/THI5 like RG60_RS12375 PF00296 Luciferase-like monooxygenase RG60_RS12380 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS12385 PF00005 ABC transporter RG60_RS12395 PF01433 Peptidase family M1 domain RG60_RS12395 PF17432 Domain of unknown function (DUF3458_C) ARM repeats RG60_RS12395 PF11940 Domain of unknown function (DUF3458) Ig-like fold RG60_RS12400 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RG60_RS12400 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RG60_RS12405 PF00152 tRNA synthetases class II (D, K and N) RG60_RS12405 PF01336 OB-fold nucleic acid binding domain RG60_RS12410 PF00267 Gram-negative porin RG60_RS12420 PF00155 Aminotransferase class I and II RG60_RS12425 PF00753 Metallo-beta-lactamase superfamily RG60_RS12430 PF05951 Bacterial protein of unknown function (DUF882) RG60_RS12440 PF03734 L,D-transpeptidase catalytic domain RG60_RS12440 PF01471 Putative peptidoglycan binding domain RG60_RS12445 PF16330 MukB hinge domain RG60_RS12445 PF04310 MukB N-terminal RG60_RS12450 PF04288 MukE-like family RG60_RS12455 PF17192 MukF middle domain RG60_RS12455 PF17193 MukF C-terminal domain RG60_RS12455 PF03882 MukF winged-helix domain RG60_RS12460 PF13847 Methyltransferase domain RG60_RS12465 PF02698 DUF218 domain RG60_RS12470 PF01636 Phosphotransferase enzyme family RG60_RS12475 PF02348 Cytidylyltransferase RG60_RS12480 PF03966 Trm112p-like protein RG60_RS12485 PF06224 Winged helix DNA-binding domain RG60_RS12490 PF02606 Tetraacyldisaccharide-1-P 4'-kinase RG60_RS12495 PF00664 ABC transporter transmembrane region RG60_RS12495 PF00005 ABC transporter RG60_RS12500 PF00753 Metallo-beta-lactamase superfamily RG60_RS12500 PF03772 Competence protein RG60_RS12505 PF00216 Bacterial DNA-binding protein RG60_RS12510 PF00575 S1 RNA binding domain RG60_RS12515 PF02224 Cytidylate kinase RG60_RS12520 PF01435 Peptidase family M48 RG60_RS12525 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RG60_RS12530 PF00266 Aminotransferase class-V RG60_RS12535 PF04239 Protein of unknown function (DUF421) RG60_RS12540 PF18381 YcaO cyclodehydratase C-terminal domain RG60_RS12540 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding RG60_RS12545 PF01226 Formate/nitrite transporter RG60_RS12550 PF01228 Glycine radical RG60_RS12550 PF02901 Pyruvate formate lyase-like RG60_RS12555 PF04055 Radical SAM superfamily RG60_RS12560 PF02525 Flavodoxin-like fold RG60_RS12565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS12565 PF03466 LysR substrate binding domain RG60_RS12570 PF13520 Amino acid permease RG60_RS12575 PF07690 Major Facilitator Superfamily RG60_RS12580 PF00857 Isochorismatase family RG60_RS12585 PF04976 DMSO reductase anchor subunit (DmsC) RG60_RS12590 PF12800 4Fe-4S binding domain RG60_RS12590 PF13247 4Fe-4S dicluster domain RG60_RS12595 PF00384 Molybdopterin oxidoreductase RG60_RS12595 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RG60_RS12595 PF01568 Molydopterin dinucleotide binding domain RG60_RS12600 PF02403 Seryl-tRNA synthetase N-terminal domain RG60_RS12600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RG60_RS12605 PF00004 ATPase family associated with various cellular activities (AAA) RG60_RS12605 PF12002 MgsA AAA+ ATPase C terminal RG60_RS12605 PF16193 AAA C-terminal domain RG60_RS12610 PF03548 Outer membrane lipoprotein carrier protein LolA RG60_RS12615 PF09397 Ftsk gamma domain RG60_RS12615 PF01580 FtsK/SpoIIIE family RG60_RS12615 PF17854 FtsK alpha domain RG60_RS12615 PF13491 4TM region of DNA translocase FtsK/SpoIIIE RG60_RS12620 PF01037 Lrp/AsnC ligand binding domain RG60_RS12630 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG60_RS12635 PF00005 ABC transporter RG60_RS12635 PF00664 ABC transporter transmembrane region RG60_RS12640 PF00664 ABC transporter transmembrane region RG60_RS12640 PF00005 ABC transporter RG60_RS12645 PF03588 Leucyl/phenylalanyl-tRNA protein transferase RG60_RS12655 PF01176 Translation initiation factor 1A / IF-1 RG60_RS12670 PF00004 ATPase family associated with various cellular activities (AAA) RG60_RS12670 PF07724 AAA domain (Cdc48 subfamily) RG60_RS12670 PF17871 AAA lid domain RG60_RS12670 PF10431 C-terminal, D2-small domain, of ClpB protein RG60_RS12670 PF02861 Clp amino terminal domain, pathogenicity island component RG60_RS12675 PF02617 ATP-dependent Clp protease adaptor protein ClpS RG60_RS12680 PF00313 'Cold-shock' DNA-binding domain RG60_RS12685 PF12704 MacB-like periplasmic core domain RG60_RS12685 PF02687 FtsX-like permease family RG60_RS12685 PF00005 ABC transporter RG60_RS12690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG60_RS12695 PF04393 Protein of unknown function (DUF535) RG60_RS12700 PF11398 Protein of unknown function (DUF2813) RG60_RS12710 PF00230 Major intrinsic protein RG60_RS12720 PF03956 Lysine exporter LysO RG60_RS12725 PF03063 Prismane/CO dehydrogenase family RG60_RS12730 PF00111 2Fe-2S iron-sulfur cluster binding domain RG60_RS12730 PF00970 Oxidoreductase FAD-binding domain RG60_RS12730 PF00175 Oxidoreductase NAD-binding domain RG60_RS12735 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RG60_RS12735 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RG60_RS12735 PF00205 Thiamine pyrophosphate enzyme, central domain RG60_RS12740 PF01212 Beta-eliminating lyase RG60_RS12745 PF11066 Protein of unknown function (DUF2867) RG60_RS12745 PF13460 NAD(P)H-binding RG60_RS12750 PF01370 NAD dependent epimerase/dehydratase family RG60_RS12755 PF01510 N-acetylmuramoyl-L-alanine amidase RG60_RS12760 PF01906 Putative heavy-metal-binding RG60_RS12765 PF12883 Protein of unknown function (DUF3828) RG60_RS12770 PF00005 ABC transporter RG60_RS12775 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG60_RS12780 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS12785 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS12790 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG60_RS12800 PF05958 tRNA (Uracil-5-)-methyltransferase RG60_RS12805 PF10767 Protein of unknown function (DUF2593) RG60_RS12810 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS12815 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS12820 PF00005 ABC transporter RG60_RS12820 PF08402 TOBE domain RG60_RS12825 PF13416 Bacterial extracellular solute-binding protein RG60_RS12835 PF10722 Putative bacterial sensory transduction regulator RG60_RS12840 PF08443 RimK-like ATP-grasp domain RG60_RS12840 PF18030 RimK PreATP-grasp domain RG60_RS12845 PF00881 Nitroreductase family RG60_RS12850 PF07214 Protein of unknown function (DUF1418) RG60_RS12855 PF00462 Glutaredoxin RG60_RS12860 PF11045 Putative inner membrane protein of Enterobacteriaceae RG60_RS12865 PF06826 Predicted Permease Membrane Region RG60_RS12865 PF02080 TrkA-C domain RG60_RS12870 PF00440 Bacterial regulatory proteins, tetR family RG60_RS12875 PF07690 Major Facilitator Superfamily RG60_RS12890 PF07690 Major Facilitator Superfamily RG60_RS12895 PF01569 PAP2 superfamily RG60_RS12900 PF00455 DeoR C terminal sensor domain RG60_RS12900 PF08220 DeoR-like helix-turn-helix domain RG60_RS12905 PF07943 Penicillin-binding protein 5, C-terminal domain RG60_RS12905 PF00768 D-alanyl-D-alanine carboxypeptidase RG60_RS12910 PF13417 Glutathione S-transferase, N-terminal domain RG60_RS12910 PF00043 Glutathione S-transferase, C-terminal domain RG60_RS12915 PF07995 Glucose / Sorbosone dehydrogenase RG60_RS12920 PF10799 Biofilm formation protein (YliH/bssR) RG60_RS12925 PF18693 TRAM domain RG60_RS12925 PF00919 Uncharacterized protein family UPF0004 RG60_RS12925 PF04055 Radical SAM superfamily RG60_RS12930 PF17156 Gammaproteobacterial periplasmic sensor domain RG60_RS12930 PF00990 Diguanylate cyclase, GGDEF domain RG60_RS12935 PF17153 Periplasmic sensor domain, extracellular RG60_RS12935 PF00563 EAL domain RG60_RS12940 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS12940 PF12911 N-terminal TM domain of oligopeptide transport permease C RG60_RS12945 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS12950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG60_RS12955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG60_RS12955 PF00005 ABC transporter RG60_RS12960 PF01112 Asparaginase RG60_RS12965 PF00994 Probable molybdopterin binding domain RG60_RS12965 PF03453 MoeA N-terminal region (domain I and II) RG60_RS12965 PF03454 MoeA C-terminal region (domain IV) RG60_RS12970 PF00899 ThiF family RG60_RS12975 PF00923 Transaldolase/Fructose-6-phosphate aldolase RG60_RS12980 PF04055 Radical SAM superfamily RG60_RS12985 PF01228 Glycine radical RG60_RS12985 PF02901 Pyruvate formate lyase-like RG60_RS12995 PF07350 Protein of unknown function (DUF1479) RG60_RS13000 PF02371 Transposase IS116/IS110/IS902 family RG60_RS13000 PF01548 Transposase RG60_RS13005 PF00005 ABC transporter RG60_RS13005 PF12848 ABC transporter RG60_RS13010 PF03734 L,D-transpeptidase catalytic domain RG60_RS13010 PF17969 L,D-transpeptidase C-terminal domain RG60_RS13015 PF03600 Citrate transporter RG60_RS13020 PF02742 Iron dependent repressor, metal binding and dimerisation domain RG60_RS13020 PF01325 Iron dependent repressor, N-terminal DNA binding domain RG60_RS13030 PF00884 Sulfatase RG60_RS13035 PF13505 Outer membrane protein beta-barrel domain RG60_RS13050 PF00210 Ferritin-like domain RG60_RS13065 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG60_RS13070 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS13075 PF00005 ABC transporter RG60_RS13085 PF00924 Mechanosensitive ion channel RG60_RS13090 PF05971 RNA methyltransferase RG60_RS13095 PF07338 Protein of unknown function (DUF1471) RG60_RS13100 PF00593 TonB dependent receptor RG60_RS13100 PF07715 TonB-dependent Receptor Plug Domain RG60_RS13105 PF18331 PKHD-type hydroxylase C-terminal domain RG60_RS13105 PF13640 2OG-Fe(II) oxygenase superfamily RG60_RS13110 PF01258 Prokaryotic dksA/traR C4-type zinc finger RG60_RS13115 PF07338 Protein of unknown function (DUF1471) RG60_RS13120 PF02615 Malate/L-lactate dehydrogenase RG60_RS13125 PF02885 Glycosyl transferase family, helical bundle domain RG60_RS13130 PF06733 DEAD_2 RG60_RS13130 PF13307 Helicase C-terminal domain RG60_RS13130 PF00270 DEAD/DEAH box helicase RG60_RS13140 PF08719 Domain of unknown function (DUF1768) RG60_RS13145 PF00270 DEAD/DEAH box helicase RG60_RS13145 PF00271 Helicase conserved C-terminal domain RG60_RS13150 PF00440 Bacterial regulatory proteins, tetR family RG60_RS13150 PF09209 Tetracyclin repressor-like, C-terminal domain RG60_RS13155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG60_RS13160 PF00005 ABC transporter RG60_RS13175 PF11076 Putative inner membrane protein YbhQ RG60_RS13180 PF03372 Endonuclease/Exonuclease/phosphatase family RG60_RS13185 PF13091 PLD-like domain RG60_RS13190 PF03706 Lysylphosphatidylglycerol synthase TM region RG60_RS13195 PF01027 Inhibitor of apoptosis-promoting Bax1 RG60_RS13200 PF01027 Inhibitor of apoptosis-promoting Bax1 RG60_RS13205 PF02391 MoaE protein RG60_RS13210 PF02597 ThiS family RG60_RS13215 PF01967 MoaC family RG60_RS13220 PF00994 Probable molybdopterin binding domain RG60_RS13225 PF06463 Molybdenum Cofactor Synthesis C RG60_RS13225 PF04055 Radical SAM superfamily RG60_RS13230 PF01933 Uncharacterised protein family UPF0052 RG60_RS13235 PF02151 UvrB/uvrC motif RG60_RS13235 PF17757 UvrB interaction domain RG60_RS13235 PF04851 Type III restriction enzyme, res subunit RG60_RS13235 PF00271 Helicase conserved C-terminal domain RG60_RS13235 PF12344 Ultra-violet resistance protein B RG60_RS13245 PF08241 Methyltransferase domain RG60_RS13250 PF00155 Aminotransferase class I and II RG60_RS13255 PF06968 Biotin and Thiamin Synthesis associated domain RG60_RS13255 PF04055 Radical SAM superfamily RG60_RS13260 PF00202 Aminotransferase class-III RG60_RS13265 PF01161 Phosphatidylethanolamine-binding protein RG60_RS13275 PF01095 Pectinesterase RG60_RS13280 PF00694 Aconitase C-terminal domain RG60_RS13280 PF00330 Aconitase family (aconitate hydratase) RG60_RS13285 PF00939 Sodium:sulfate symporter transmembrane region RG60_RS13290 PF04303 PrpF protein RG60_RS13295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS13295 PF03466 LysR substrate binding domain RG60_RS13300 PF10282 Lactonase, 7-bladed beta-propeller RG60_RS13310 PF03459 TOBE domain RG60_RS13310 PF00005 ABC transporter RG60_RS13315 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS13330 PF10766 Multidrug efflux pump-associated protein AcrZ RG60_RS13335 PF03459 TOBE domain RG60_RS13335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS13340 PF00005 ABC transporter RG60_RS13345 PF16363 GDP-mannose 4,6 dehydratase RG60_RS13350 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain RG60_RS13350 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain RG60_RS13355 PF00288 GHMP kinases N terminal domain RG60_RS13355 PF08544 GHMP kinases C terminal RG60_RS13355 PF10509 Galactokinase galactose-binding signature RG60_RS13360 PF01263 Aldose 1-epimerase RG60_RS13365 PF00300 Histidine phosphatase superfamily (branch 1) RG60_RS13370 PF00793 DAHP synthetase I family RG60_RS13380 PF13985 YbgS-like protein RG60_RS13385 PF01545 Cation efflux family RG60_RS13390 PF04973 Nicotinamide mononucleotide transporter RG60_RS13395 PF02445 Quinolinate synthetase A protein RG60_RS13440 PF16331 TolA binding protein trimerisation RG60_RS13440 PF13174 Tetratricopeptide repeat RG60_RS13445 PF00691 OmpA family RG60_RS13450 PF07676 WD40-like Beta Propeller Repeat RG60_RS13450 PF04052 TolB amino-terminal domain RG60_RS13455 PF06519 TolA C-terminal RG60_RS13460 PF02472 Biopolymer transport protein ExbD/TolR RG60_RS13465 PF01618 MotA/TolQ/ExbB proton channel family RG60_RS13470 PF03061 Thioesterase superfamily RG60_RS13475 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) RG60_RS13480 PF08173 Membrane bound YbgT-like protein RG60_RS13485 PF02322 Cytochrome bd terminal oxidase subunit II RG60_RS13490 PF01654 Cytochrome bd terminal oxidase subunit I RG60_RS13500 PF09261 Alpha mannosidase middle domain RG60_RS13500 PF07748 Glycosyl hydrolases family 38 C-terminal domain RG60_RS13500 PF01074 Glycosyl hydrolases family 38 N-terminal domain RG60_RS13505 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG60_RS13505 PF02378 Phosphotransferase system, EIIC RG60_RS13505 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG60_RS13510 PF00392 Bacterial regulatory proteins, gntR family RG60_RS13510 PF07702 UTRA domain RG60_RS13515 PF02629 CoA binding domain RG60_RS13515 PF00549 CoA-ligase RG60_RS13520 PF00549 CoA-ligase RG60_RS13520 PF08442 ATP-grasp domain RG60_RS13525 PF02817 e3 binding domain RG60_RS13525 PF00364 Biotin-requiring enzyme RG60_RS13525 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RG60_RS13530 PF16870 2-oxoglutarate dehydrogenase C-terminal RG60_RS13530 PF02779 Transketolase, pyrimidine binding domain RG60_RS13530 PF00676 Dehydrogenase E1 component RG60_RS13530 PF16078 2-oxoglutarate dehydrogenase N-terminus RG60_RS13540 PF13085 2Fe-2S iron-sulfur cluster binding domain RG60_RS13545 PF00890 FAD binding domain RG60_RS13545 PF02910 Fumarate reductase flavoprotein C-term RG60_RS13550 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RG60_RS13555 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RG60_RS13575 PF00285 Citrate synthase, C-terminal domain RG60_RS13580 PF00419 Fimbrial protein RG60_RS13585 PF13954 PapC N-terminal domain RG60_RS13585 PF00577 Outer membrane usher protein RG60_RS13585 PF13953 PapC C-terminal domain RG60_RS13590 PF02753 Pili assembly chaperone PapD, C-terminal domain RG60_RS13590 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG60_RS13595 PF00419 Fimbrial protein RG60_RS13600 PF05145 Transition state regulatory protein AbrB RG60_RS13605 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RG60_RS13605 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RG60_RS13605 PF06827 Zinc finger found in FPG and IleRS RG60_RS13610 PF03746 LamB/YcsF family RG60_RS13615 PF02626 Carboxyltransferase domain, subdomain A and B RG60_RS13620 PF02682 Carboxyltransferase domain, subdomain C and D RG60_RS13625 PF01784 NIF3 (NGG1p interacting factor 3) RG60_RS13630 PF00854 POT family RG60_RS13635 PF03441 FAD binding domain of DNA photolyase RG60_RS13635 PF00875 DNA photolyase RG60_RS13640 PF08349 Protein of unknown function (DUF1722) RG60_RS13645 PF01609 Transposase DDE domain RG60_RS13645 PF13808 DDE_Tnp_1-associated RG60_RS13650 PF13808 DDE_Tnp_1-associated RG60_RS13660 PF03527 RHS protein RG60_RS13660 PF05593 RHS Repeat RG60_RS13670 PF03527 RHS protein RG60_RS13670 PF05593 RHS Repeat RG60_RS13675 PF10725 Protein of unknown function (DUF2517) RG60_RS13680 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) RG60_RS13685 PF03814 Potassium-transporting ATPase A subunit RG60_RS13695 PF02669 K+-transporting ATPase, c chain RG60_RS13700 PF13492 GAF domain RG60_RS13700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS13700 PF13493 Domain of unknown function (DUF4118) RG60_RS13700 PF00512 His Kinase A (phospho-acceptor) domain RG60_RS13700 PF02702 Osmosensitive K+ channel His kinase sensor domain RG60_RS13705 PF00072 Response regulator receiver domain RG60_RS13705 PF00486 Transcriptional regulatory protein, C terminal RG60_RS13720 PF01276 Orn/Lys/Arg decarboxylase, major domain RG60_RS13720 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RG60_RS13720 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RG60_RS13725 PF13520 Amino acid permease RG60_RS13730 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RG60_RS13730 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RG60_RS13730 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RG60_RS13730 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RG60_RS13735 PF03925 SeqA protein C-terminal domain RG60_RS13735 PF17206 SeqA protein N-terminal domain RG60_RS13740 PF12697 Alpha/beta hydrolase family RG60_RS13745 PF01402 Ribbon-helix-helix protein, copG family RG60_RS13750 PF00258 Flavodoxin RG60_RS13765 PF01475 Ferric uptake regulator family RG60_RS13770 PF13982 YbfN-like lipoprotein RG60_RS13775 PF03573 outer membrane porin, OprD family RG60_RS13785 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain RG60_RS13785 PF00749 tRNA synthetases class I (E and Q), catalytic domain RG60_RS13790 PF02378 Phosphotransferase system, EIIC RG60_RS13790 PF00367 phosphotransferase system, EIIB RG60_RS13790 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RG60_RS13795 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RG60_RS13800 PF01979 Amidohydrolase family RG60_RS13805 PF01047 MarR family RG60_RS13805 PF00480 ROK family RG60_RS13810 PF13344 Haloacid dehalogenase-like hydrolase RG60_RS13820 PF00733 Asparagine synthase RG60_RS13820 PF13537 Glutamine amidotransferase domain RG60_RS13865 PF01494 FAD binding domain RG60_RS13870 PF00919 Uncharacterized protein family UPF0004 RG60_RS13870 PF04055 Radical SAM superfamily RG60_RS13870 PF01938 TRAM domain RG60_RS13875 PF02562 PhoH-like protein RG60_RS13880 PF02130 Uncharacterized protein family UPF0054 RG60_RS13885 PF03471 Transporter associated domain RG60_RS13885 PF00571 CBS domain RG60_RS13890 PF00795 Carbon-nitrogen hydrolase RG60_RS13905 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG60_RS13910 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS13915 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS13920 PF00005 ABC transporter RG60_RS13925 PF01156 Inosine-uridine preferring nucleoside hydrolase RG60_RS13945 PF06889 Protein of unknown function (DUF1266) RG60_RS13950 PF08238 Sel1 repeat RG60_RS13960 PF06889 Protein of unknown function (DUF1266) RG60_RS13965 PF08238 Sel1 repeat RG60_RS13970 PF07295 Zinc-ribbon containing domain RG60_RS13975 PF08264 Anticodon-binding domain of tRNA RG60_RS13975 PF00133 tRNA synthetases class I (I, L, M and V) RG60_RS13975 PF13603 Leucyl-tRNA synthetase, Domain 2 RG60_RS13980 PF04390 Lipopolysaccharide-assembly RG60_RS13985 PF14840 Processivity clamp loader gamma complex DNA pol III C-term RG60_RS13985 PF06144 DNA polymerase III, delta subunit RG60_RS13990 PF01467 Cytidylyltransferase-like RG60_RS13995 PF00300 Histidine phosphatase superfamily (branch 1) RG60_RS14005 PF02590 Predicted SPOUT methyltransferase RG60_RS14010 PF03717 Penicillin-binding Protein dimerisation domain RG60_RS14010 PF00905 Penicillin binding protein transpeptidase domain RG60_RS14015 PF01098 Cell cycle protein RG60_RS14020 PF03330 Lytic transglycolase RG60_RS14020 PF05036 Sporulation related domain RG60_RS14025 PF00768 D-alanyl-D-alanine carboxypeptidase RG60_RS14025 PF07943 Penicillin-binding protein 5, C-terminal domain RG60_RS14030 PF04359 Protein of unknown function (DUF493) RG60_RS14035 PF03099 Biotin/lipoate A/B protein ligase family RG60_RS14045 PF03466 LysR substrate binding domain RG60_RS14045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS14055 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family RG60_RS14055 PF04055 Radical SAM superfamily RG60_RS14060 PF02416 mttA/Hcf106 family RG60_RS14065 PF00795 Carbon-nitrogen hydrolase RG60_RS14070 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RG60_RS14075 PF00313 'Cold-shock' DNA-binding domain RG60_RS14080 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP RG60_RS14090 PF03606 C4-dicarboxylate anaerobic carrier RG60_RS14095 PF00072 Response regulator receiver domain RG60_RS14095 PF12431 Transcriptional regulator RG60_RS14100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS14100 PF17203 Single cache domain 3 RG60_RS14100 PF00989 PAS fold RG60_RS14100 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain RG60_RS14105 PF08218 Citrate lyase ligase C-terminal domain RG60_RS14110 PF06857 Malonate decarboxylase delta subunit (MdcD) RG60_RS14115 PF03328 HpcH/HpaI aldolase/citrate lyase family RG60_RS14120 PF04223 Citrate lyase, alpha subunit (CitF) RG60_RS14125 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase RG60_RS14130 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase RG60_RS14135 PF00939 Sodium:sulfate symporter transmembrane region RG60_RS14140 PF00445 Ribonuclease T2 family RG60_RS14150 PF14760 Rnk N-terminus RG60_RS14150 PF01272 Transcription elongation factor, GreA/GreB, C-term RG60_RS14160 PF08240 Alcohol dehydrogenase GroES-like domain RG60_RS14160 PF13823 Alcohol dehydrogenase GroES-associated RG60_RS14160 PF00107 Zinc-binding dehydrogenase RG60_RS14165 PF00582 Universal stress protein family RG60_RS14170 PF13192 Thioredoxin domain RG60_RS14170 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG60_RS14175 PF10417 C-terminal domain of 1-Cys peroxiredoxin RG60_RS14175 PF00578 AhpC/TSA family RG60_RS14180 PF13098 Thioredoxin-like domain RG60_RS14185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS14185 PF03466 LysR substrate binding domain RG60_RS14190 PF01507 Phosphoadenosine phosphosulfate reductase family RG60_RS14190 PF11922 Domain of unknown function (DUF3440) RG60_RS14195 PF02195 ParB-like nuclease domain RG60_RS14200 PF00155 Aminotransferase class I and II RG60_RS14205 PF00465 Iron-containing alcohol dehydrogenase RG60_RS14210 PF04328 Selenoprotein, putative RG60_RS14215 PF13722 5TM C-terminal transporter carbon starvation CstA RG60_RS14215 PF02554 Carbon starvation protein CstA RG60_RS14220 PF03061 Thioesterase superfamily RG60_RS14230 PF00550 Phosphopantetheine attachment site RG60_RS14230 PF00857 Isochorismatase family RG60_RS14235 PF13193 AMP-binding enzyme C-terminal domain RG60_RS14235 PF00501 AMP-binding enzyme RG60_RS14240 PF00425 chorismate binding enzyme RG60_RS14250 PF01497 Periplasmic binding protein RG60_RS14255 PF05977 Transmembrane secretion effector RG60_RS14260 PF01032 FecCD transport family RG60_RS14265 PF01032 FecCD transport family RG60_RS14270 PF00005 ABC transporter RG60_RS14275 PF02706 Chain length determinant protein RG60_RS14280 PF00501 AMP-binding enzyme RG60_RS14280 PF00550 Phosphopantetheine attachment site RG60_RS14280 PF00975 Thioesterase domain RG60_RS14280 PF13193 AMP-binding enzyme C-terminal domain RG60_RS14280 PF00668 Condensation domain RG60_RS14285 PF03621 MbtH-like protein RG60_RS14290 PF00756 Putative esterase RG60_RS14290 PF11806 Domain of unknown function (DUF3327) RG60_RS14300 PF00593 TonB dependent receptor RG60_RS14300 PF07715 TonB-dependent Receptor Plug Domain RG60_RS14305 PF17837 4'-phosphopantetheinyl transferase N-terminal domain RG60_RS14305 PF01648 4'-phosphopantetheinyl transferase superfamily RG60_RS14310 PF01848 Hok/gef family RG60_RS14320 PF01848 Hok/gef family RG60_RS14335 PF04107 Glutamate-cysteine ligase family 2(GCS2) RG60_RS14340 PF06643 Protein of unknown function (DUF1158) RG60_RS14345 PF04237 YjbR RG60_RS14350 PF00881 Nitroreductase family RG60_RS14355 PF00924 Mechanosensitive ion channel RG60_RS14360 PF00324 Amino acid permease RG60_RS14365 PF00873 AcrB/AcrD/AcrF family RG60_RS14370 PF00529 HlyD membrane-fusion protein of T1SS RG60_RS14370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG60_RS14375 PF11604 Copper binding periplasmic protein CusF RG60_RS14380 PF02321 Outer membrane efflux protein RG60_RS14390 PF00072 Response regulator receiver domain RG60_RS14390 PF00486 Transcriptional regulatory protein, C terminal RG60_RS14395 PF00672 HAMP domain RG60_RS14395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS14395 PF00512 His Kinase A (phospho-acceptor) domain RG60_RS14405 PF04717 Type VI secretion system, phage-baseplate injector RG60_RS14415 PF05488 PAAR motif RG60_RS14415 PF05593 RHS Repeat RG60_RS14430 PF01609 Transposase DDE domain RG60_RS14430 PF13808 DDE_Tnp_1-associated RG60_RS14435 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RG60_RS14435 PF13632 Glycosyl transferase family group 2 RG60_RS14440 PF13283 Bacteriophage N adsorption protein A C-term RG60_RS14445 PF14488 Domain of unknown function (DUF4434) RG60_RS14455 PF12833 Helix-turn-helix domain RG60_RS14465 PF00196 Bacterial regulatory proteins, luxR family RG60_RS14465 PF00072 Response regulator receiver domain RG60_RS14470 PF00419 Fimbrial protein RG60_RS14475 PF00419 Fimbrial protein RG60_RS14485 PF02753 Pili assembly chaperone PapD, C-terminal domain RG60_RS14485 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG60_RS14490 PF00419 Fimbrial protein RG60_RS14495 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RG60_RS14495 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RG60_RS14505 PF04307 LexA-binding, inner membrane-associated putative hydrolase RG60_RS14510 PF09190 DALR domain RG60_RS14510 PF01406 tRNA synthetases class I (C) catalytic domain RG60_RS14515 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RG60_RS14520 PF12850 Calcineurin-like phosphoesterase superfamily domain RG60_RS14530 PF00731 AIR carboxylase RG60_RS14535 PF02222 ATP-grasp domain RG60_RS14535 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain RG60_RS14540 PF00696 Amino acid kinase family RG60_RS14545 PF11392 Protein of unknown function (DUF2877) RG60_RS14555 PF02615 Malate/L-lactate dehydrogenase RG60_RS14560 PF02615 Malate/L-lactate dehydrogenase RG60_RS14565 PF01546 Peptidase family M20/M25/M40 RG60_RS14570 PF05899 Protein of unknown function (DUF861) RG60_RS14570 PF07883 Cupin domain RG60_RS14575 PF02595 Glycerate kinase family RG60_RS14580 PF00860 Permease family RG60_RS14585 PF01979 Amidohydrolase family RG60_RS14590 PF01548 Transposase RG60_RS14590 PF02371 Transposase IS116/IS110/IS902 family RG60_RS14600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RG60_RS14600 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RG60_RS14605 PF01261 Xylose isomerase-like TIM barrel RG60_RS14610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RG60_RS14610 PF00205 Thiamine pyrophosphate enzyme, central domain RG60_RS14610 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RG60_RS14615 PF09339 IclR helix-turn-helix domain RG60_RS14615 PF01614 Bacterial transcriptional regulator RG60_RS14620 PF04115 Ureidoglycolate lyase RG60_RS14625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS14625 PF03466 LysR substrate binding domain RG60_RS14645 PF03527 RHS protein RG60_RS14645 PF14220 Domain of unknown function (DUF4329) RG60_RS14645 PF05593 RHS Repeat RG60_RS14655 PF00005 ABC transporter RG60_RS14660 PF13472 GDSL-like Lipase/Acylhydrolase family RG60_RS14665 PF00106 short chain dehydrogenase RG60_RS14670 PF00085 Thioredoxin RG60_RS14675 PF03649 Uncharacterised protein family (UPF0014) RG60_RS14680 PF00005 ABC transporter RG60_RS14685 PF01145 SPFH domain / Band 7 family RG60_RS14685 PF16200 C-terminal region of band_7 RG60_RS14690 PF01957 NfeD-like C-terminal, partner-binding RG60_RS14695 PF13411 MerR HTH family regulatory protein RG60_RS14705 PF13520 Amino acid permease RG60_RS14710 PF04960 Glutaminase RG60_RS14715 PF00403 Heavy-metal-associated domain RG60_RS14730 PF01381 Helix-turn-helix RG60_RS14735 PF01963 TraB family RG60_RS14740 PF04073 Aminoacyl-tRNA editing domain RG60_RS14745 PF02872 5'-nucleotidase, C-terminal domain RG60_RS14745 PF00149 Calcineurin-like phosphoesterase RG60_RS14755 PF07690 Major Facilitator Superfamily RG60_RS14760 PF02254 TrkA-N domain RG60_RS14760 PF00999 Sodium/hydrogen exchanger family RG60_RS14765 PF00294 pfkB family carbohydrate kinase RG60_RS14770 PF07859 alpha/beta hydrolase fold RG60_RS14775 PF00762 Ferrochelatase RG60_RS14780 PF05191 Adenylate kinase, active site lid RG60_RS14785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS14785 PF00183 Hsp90 protein RG60_RS14790 PF02132 RecR protein RG60_RS14790 PF13662 Toprim domain RG60_RS14795 PF02575 YbaB/EbfC DNA-binding family RG60_RS14800 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding RG60_RS14800 PF12170 DNA polymerase III tau subunit V interacting with alpha RG60_RS14800 PF12169 DNA polymerase III subunits gamma and tau domain III RG60_RS14805 PF00156 Phosphoribosyl transferase domain RG60_RS14815 PF04304 Protein of unknown function (DUF454) RG60_RS14820 PF07445 Primosomal replication protein priC RG60_RS14825 PF10689 Protein of unknown function (DUF2496) RG60_RS14835 PF12794 Mechanosensitive ion channel inner membrane domain 1 RG60_RS14835 PF12795 Mechanosensitive ion channel porin domain RG60_RS14835 PF00924 Mechanosensitive ion channel RG60_RS14845 PF00440 Bacterial regulatory proteins, tetR family RG60_RS14845 PF08361 MAATS-type transcriptional repressor, C-terminal region RG60_RS14850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG60_RS14850 PF00529 HlyD membrane-fusion protein of T1SS RG60_RS14855 PF00873 AcrB/AcrD/AcrF family RG60_RS14860 PF10757 Biofilm formation regulator YbaJ RG60_RS14865 PF05321 Haemolysin expression modulating protein RG60_RS14870 PF12464 Maltose acetyltransferase RG60_RS14870 PF14602 Hexapeptide repeat of succinyl-transferase RG60_RS14875 PF10777 Inner membrane protein YlaC RG60_RS14880 PF12792 CSS motif domain associated with EAL RG60_RS14880 PF00563 EAL domain RG60_RS14885 PF07237 Protein of unknown function (DUF1428) RG60_RS14895 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RG60_RS14900 PF09619 Type III secretion system lipoprotein chaperone (YscW) RG60_RS14910 PF00909 Ammonium Transporter Family RG60_RS14915 PF00543 Nitrogen regulatory protein P-II RG60_RS14920 PF00664 ABC transporter transmembrane region RG60_RS14920 PF00005 ABC transporter RG60_RS14925 PF00664 ABC transporter transmembrane region RG60_RS14925 PF00005 ABC transporter RG60_RS14930 PF13404 AsnC-type helix-turn-helix domain RG60_RS14930 PF01037 Lrp/AsnC ligand binding domain RG60_RS14940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG60_RS14940 PF12793 Sugar transport-related sRNA regulator N-term RG60_RS14945 PF06508 Queuosine biosynthesis protein QueC RG60_RS14960 PF13145 PPIC-type PPIASE domain RG60_RS14965 PF00216 Bacterial DNA-binding protein RG60_RS14970 PF02190 ATP-dependent protease La (LON) substrate-binding domain RG60_RS14970 PF00004 ATPase family associated with various cellular activities (AAA) RG60_RS14970 PF05362 Lon protease (S16) C-terminal proteolytic domain RG60_RS14975 PF07724 AAA domain (Cdc48 subfamily) RG60_RS14975 PF10431 C-terminal, D2-small domain, of ClpB protein RG60_RS14975 PF06689 ClpX C4-type zinc finger RG60_RS14980 PF00574 Clp protease RG60_RS14985 PF05697 Bacterial trigger factor protein (TF) RG60_RS14985 PF05698 Bacterial trigger factor protein (TF) C-terminus RG60_RS14985 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RG60_RS14995 PF01722 BolA-like protein RG60_RS15000 PF03923 Uncharacterized lipoprotein RG60_RS15000 PF08139 Prokaryotic membrane lipoprotein lipid attachment site RG60_RS15005 PF07690 Major Facilitator Superfamily RG60_RS15010 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RG60_RS15010 PF06481 COX Aromatic Rich Motif RG60_RS15015 PF00115 Cytochrome C and Quinol oxidase polypeptide I RG60_RS15020 PF00510 Cytochrome c oxidase subunit III RG60_RS15025 PF03626 Prokaryotic Cytochrome C oxidase subunit IV RG60_RS15030 PF01040 UbiA prenyltransferase family RG60_RS15050 PF07690 Major Facilitator Superfamily RG60_RS15055 PF04461 Protein of unknown function (DUF520) RG60_RS15060 PF08546 Ketopantoate reductase PanE/ApbA C terminal RG60_RS15060 PF02558 Ketopantoate reductase PanE/ApbA RG60_RS15065 PF01965 DJ-1/PfpI family RG60_RS15070 PF02926 THUMP domain RG60_RS15070 PF02568 Thiamine biosynthesis protein (ThiI) RG60_RS15075 PF02609 Exonuclease VII small subunit RG60_RS15080 PF00348 Polyprenyl synthetase RG60_RS15085 PF02779 Transketolase, pyrimidine binding domain RG60_RS15085 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RG60_RS15085 PF02780 Transketolase, C-terminal domain RG60_RS15090 PF00248 Aldo/keto reductase family RG60_RS15095 PF04608 Phosphatidylglycerophosphatase A RG60_RS15100 PF00586 AIR synthase related protein, N-terminal domain RG60_RS15100 PF02769 AIR synthase related protein, C-terminal domain RG60_RS15105 PF01029 NusB family RG60_RS15110 PF00885 6,7-dimethyl-8-ribityllumazine synthase RG60_RS15115 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RG60_RS15115 PF01872 RibD C-terminal domain RG60_RS15120 PF03477 ATP cone domain RG60_RS15125 PF11622 Protein of unknown function (DUF3251) RG60_RS15130 PF03502 Nucleoside-specific channel-forming protein, Tsx RG60_RS15135 PF01844 HNH endonuclease RG60_RS15140 PF02355 Protein export membrane protein RG60_RS15140 PF07549 SecD/SecF GG Motif RG60_RS15145 PF07549 SecD/SecF GG Motif RG60_RS15145 PF13721 SecD export protein N-terminal TM region RG60_RS15145 PF02355 Protein export membrane protein RG60_RS15150 PF02699 Preprotein translocase subunit RG60_RS15155 PF01702 Queuine tRNA-ribosyltransferase RG60_RS15160 PF02547 Queuosine biosynthesis protein RG60_RS15165 PF04336 Acyl carrier protein phosphodiesterase RG60_RS15170 PF02903 Alpha amylase, N-terminal ig-like domain RG60_RS15170 PF00128 Alpha amylase, catalytic domain RG60_RS15175 PF00324 Amino acid permease RG60_RS15180 PF05525 Branched-chain amino acid transport protein RG60_RS15185 PF00989 PAS fold RG60_RS15185 PF00512 His Kinase A (phospho-acceptor) domain RG60_RS15185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS15185 PF11808 Phosphate regulon sensor protein PhoR RG60_RS15190 PF00486 Transcriptional regulatory protein, C terminal RG60_RS15190 PF00072 Response regulator receiver domain RG60_RS15195 PF12320 Type 5 capsule protein repressor C-terminal domain RG60_RS15195 PF00149 Calcineurin-like phosphoesterase RG60_RS15200 PF13476 AAA domain RG60_RS15205 PF07690 Major Facilitator Superfamily RG60_RS15210 PF00480 ROK family RG60_RS15215 PF04381 Putative exonuclease, RdgC RG60_RS15220 PF10971 Protein of unknown function (DUF2773) RG60_RS15230 PF06865 Pyrimidine/purine nucleoside phosphorylase RG60_RS15235 PF07302 AroM protein RG60_RS15245 PF16362 YaiA protein RG60_RS15250 PF01202 Shikimate kinase RG60_RS15255 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 RG60_RS15260 PF03807 NADP oxidoreductase coenzyme F420-dependent RG60_RS15260 PF14748 Pyrroline-5-carboxylate reductase dimerisation RG60_RS15265 PF00990 Diguanylate cyclase, GGDEF domain RG60_RS15265 PF05230 MASE2 domain RG60_RS15270 PF07769 psiF repeat RG60_RS15275 PF00245 Alkaline phosphatase RG60_RS15290 PF01820 D-ala D-ala ligase N-terminus RG60_RS15290 PF07478 D-ala D-ala ligase C-terminus RG60_RS15295 PF10953 Protein of unknown function (DUF2754) RG60_RS15300 PF10954 Protein of unknown function (DUF2755) RG60_RS15305 PF07759 Protein of unknown function (DUF1615) RG60_RS15310 PF05992 SbmA/BacA-like family RG60_RS15320 PF00144 Beta-lactamase RG60_RS15325 PF15977 Winged helix-turn-helix DNA binding RG60_RS15330 PF03797 Autotransporter beta-domain RG60_RS15330 PF03212 Pertactin RG60_RS15340 PF00490 Delta-aminolevulinic acid dehydratase RG60_RS15345 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RG60_RS15350 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS15355 PF00005 ABC transporter RG60_RS15360 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RG60_RS15370 PF02585 GlcNAc-PI de-N-acetylase RG60_RS15375 PF00535 Glycosyl transferase family 2 RG60_RS15380 PF00132 Bacterial transferase hexapeptide (six repeats) RG60_RS15390 PF02583 Metal-sensitive transcriptional repressor RG60_RS15395 PF08240 Alcohol dehydrogenase GroES-like domain RG60_RS15395 PF00107 Zinc-binding dehydrogenase RG60_RS15400 PF00756 Putative esterase RG60_RS15405 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) RG60_RS15410 PF07690 Major Facilitator Superfamily RG60_RS15420 PF00682 HMGL-like RG60_RS15420 PF07836 DmpG-like communication domain RG60_RS15425 PF01118 Semialdehyde dehydrogenase, NAD binding domain RG60_RS15425 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation RG60_RS15430 PF01557 Fumarylacetoacetate (FAA) hydrolase family RG60_RS15435 PF12697 Alpha/beta hydrolase family RG60_RS15440 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RG60_RS15445 PF01494 FAD binding domain RG60_RS15450 PF09339 IclR helix-turn-helix domain RG60_RS15450 PF01614 Bacterial transcriptional regulator RG60_RS15455 PF00356 Bacterial regulatory proteins, lacI family RG60_RS15465 PF00703 Glycosyl hydrolases family 2 RG60_RS15465 PF02929 Beta galactosidase small chain RG60_RS15465 PF16353 Domain of unknown function(DUF4981) RG60_RS15465 PF02836 Glycosyl hydrolases family 2, TIM barrel domain RG60_RS15465 PF02837 Glycosyl hydrolases family 2, sugar binding domain RG60_RS15470 PF01306 LacY proton/sugar symporter RG60_RS15475 PF00132 Bacterial transferase hexapeptide (six repeats) RG60_RS15475 PF12464 Maltose acetyltransferase RG60_RS15480 PF07690 Major Facilitator Superfamily RG60_RS15485 PF02560 Cyanate lyase C-terminal domain RG60_RS15490 PF00484 Carbonic anhydrase RG60_RS15495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS15495 PF03466 LysR substrate binding domain RG60_RS15500 PF07969 Amidohydrolase family RG60_RS15505 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin RG60_RS15510 PF13193 AMP-binding enzyme C-terminal domain RG60_RS15510 PF16177 Acetyl-coenzyme A synthetase N-terminus RG60_RS15510 PF00501 AMP-binding enzyme RG60_RS15515 PF03972 MmgE/PrpD family RG60_RS15520 PF00285 Citrate synthase, C-terminal domain RG60_RS15530 PF00158 Sigma-54 interaction domain RG60_RS15530 PF06506 Propionate catabolism activator RG60_RS15530 PF02954 Bacterial regulatory protein, Fis family RG60_RS15535 PF07338 Protein of unknown function (DUF1471) RG60_RS15540 PF01810 LysE type translocator RG60_RS15555 PF08240 Alcohol dehydrogenase GroES-like domain RG60_RS15555 PF00107 Zinc-binding dehydrogenase RG60_RS15560 PF02653 Branched-chain amino acid transport system / permease component RG60_RS15565 PF02653 Branched-chain amino acid transport system / permease component RG60_RS15570 PF00005 ABC transporter RG60_RS15575 PF13407 Periplasmic binding protein domain RG60_RS15585 PF07969 Amidohydrolase family RG60_RS15590 PF00696 Amino acid kinase family RG60_RS15595 PF06545 Protein of unknown function (DUF1116) RG60_RS15600 PF00549 CoA-ligase RG60_RS15600 PF02629 CoA binding domain RG60_RS15605 PF11392 Protein of unknown function (DUF2877) RG60_RS15610 PF12796 Ankyrin repeats (3 copies) RG60_RS15620 PF06496 Protein of unknown function (DUF1097) RG60_RS15625 PF03466 LysR substrate binding domain RG60_RS15625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS15630 PF00563 EAL domain RG60_RS15630 PF00196 Bacterial regulatory proteins, luxR family RG60_RS15640 PF02028 BCCT, betaine/carnitine/choline family transporter RG60_RS15650 PF13977 BetI-type transcriptional repressor, C-terminal RG60_RS15650 PF00440 Bacterial regulatory proteins, tetR family RG60_RS15655 PF00171 Aldehyde dehydrogenase family RG60_RS15660 PF05199 GMC oxidoreductase RG60_RS15660 PF00732 GMC oxidoreductase RG60_RS15670 PF01548 Transposase RG60_RS15670 PF02371 Transposase IS116/IS110/IS902 family RG60_RS15675 PF00732 GMC oxidoreductase RG60_RS15675 PF05199 GMC oxidoreductase RG60_RS15695 PF02589 LUD domain RG60_RS15700 PF11870 Domain of unknown function (DUF3390) RG60_RS15700 PF02589 LUD domain RG60_RS15700 PF13183 4Fe-4S dicluster domain RG60_RS15705 PF02754 Cysteine-rich domain RG60_RS15710 PF12852 Cupin RG60_RS15710 PF12833 Helix-turn-helix domain RG60_RS15715 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG60_RS15715 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RG60_RS15720 PF07338 Protein of unknown function (DUF1471) RG60_RS15725 PF04224 Protein of unknown function, DUF417 RG60_RS15730 PF00248 Aldo/keto reductase family RG60_RS15735 PF12833 Helix-turn-helix domain RG60_RS15740 PF11924 Inverse autotransporter, beta-domain RG60_RS15755 PF01197 Ribosomal protein L31 RG60_RS15760 PF00444 Ribosomal protein L36 RG60_RS15775 PF00196 Bacterial regulatory proteins, luxR family RG60_RS15780 PF16449 Fimbrillin MatB RG60_RS15785 PF18649 EcpB C-terminal domain RG60_RS15805 PF03692 Putative zinc- or iron-chelating domain RG60_RS15815 PF07274 Protein of unknown function (DUF1440) RG60_RS15825 PF01799 [2Fe-2S] binding domain RG60_RS15825 PF00111 2Fe-2S iron-sulfur cluster binding domain RG60_RS15830 PF00941 FAD binding domain in molybdopterin dehydrogenase RG60_RS15830 PF03450 CO dehydrogenase flavoprotein C-terminal domain RG60_RS15835 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RG60_RS15835 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RG60_RS15840 PF13478 XdhC Rossmann domain RG60_RS15840 PF02625 XdhC and CoxI family RG60_RS15845 PF03466 LysR substrate binding domain RG60_RS15870 PF06755 CbtA_toxin of type IV toxin-antitoxin system RG60_RS15875 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A RG60_RS15885 PF06174 Protein of unknown function (DUF987) RG60_RS15890 PF04002 RadC-like JAB domain RG60_RS15895 PF03230 Antirestriction protein RG60_RS15905 PF06067 Domain of unknown function (DUF932) RG60_RS15930 PF13018 Extended Signal Peptide of Type V secretion system RG60_RS15930 PF03797 Autotransporter beta-domain RG60_RS15930 PF16168 Adhesin of bacterial autotransporter system, probable stalk RG60_RS15950 PF02342 TerD domain RG60_RS15970 PF02342 TerD domain RG60_RS15975 PF02342 TerD domain RG60_RS15980 PF03741 Integral membrane protein TerC family RG60_RS15985 PF05099 Tellurite resistance protein TerB RG60_RS15990 PF02342 TerD domain RG60_RS15995 PF02342 TerD domain RG60_RS16015 PF15608 PELOTA RNA binding domain RG60_RS16015 PF11202 Phosphoribosyl transferase (PRTase) RG60_RS16045 PF02342 TerD domain RG60_RS16050 PF00092 von Willebrand factor type A domain RG60_RS16055 PF00092 von Willebrand factor type A domain RG60_RS16070 PF03050 Transposase IS66 family RG60_RS16070 PF13817 IS66 C-terminal element RG60_RS16070 PF13007 Transposase C of IS166 homeodomain RG60_RS16070 PF13005 zinc-finger binding domain of transposase IS66 RG60_RS16075 PF05717 IS66 Orf2 like protein RG60_RS16090 PF00665 Integrase core domain RG60_RS16090 PF13276 HTH-like domain RG60_RS16090 PF13333 Integrase core domain RG60_RS16120 PF03050 Transposase IS66 family RG60_RS16120 PF13817 IS66 C-terminal element RG60_RS16120 PF13005 zinc-finger binding domain of transposase IS66 RG60_RS16120 PF13007 Transposase C of IS166 homeodomain RG60_RS16130 PF07690 Major Facilitator Superfamily RG60_RS16135 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RG60_RS16135 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RG60_RS16150 PF00665 Integrase core domain RG60_RS16150 PF13276 HTH-like domain RG60_RS16200 PF05860 haemagglutination activity domain RG60_RS16200 PF13332 Hemagglutinin repeat RG60_RS16200 PF04829 Pre-toxin domain with VENN motif RG60_RS16215 PF04829 Pre-toxin domain with VENN motif RG60_RS16215 PF13332 Hemagglutinin repeat RG60_RS16215 PF05860 haemagglutination activity domain RG60_RS16220 PF08479 POTRA domain, ShlB-type RG60_RS16220 PF17287 POTRA domain RG60_RS16220 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RG60_RS16240 PF00356 Bacterial regulatory proteins, lacI family RG60_RS16240 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RG60_RS16245 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG60_RS16255 PF03611 PTS system sugar-specific permease component RG60_RS16275 PF07690 Major Facilitator Superfamily RG60_RS16280 PF00294 pfkB family carbohydrate kinase RG60_RS16285 PF08220 DeoR-like helix-turn-helix domain RG60_RS16285 PF00455 DeoR C terminal sensor domain RG60_RS16290 PF01842 ACT domain RG60_RS16295 PF01842 ACT domain RG60_RS16320 PF02517 CPBP intramembrane metalloprotease RG60_RS16330 PF13229 Right handed beta helix region RG60_RS16340 PF07883 Cupin domain RG60_RS16350 PF14583 Oligogalacturonate lyase RG60_RS16395 PF05321 Haemolysin expression modulating protein RG60_RS16460 PF00005 ABC transporter RG60_RS16465 PF01032 FecCD transport family RG60_RS16475 PF00593 TonB dependent receptor RG60_RS16475 PF07715 TonB-dependent Receptor Plug Domain RG60_RS16480 PF13673 Acetyltransferase (GNAT) domain RG60_RS16495 PF00350 Dynamin family RG60_RS16500 PF13990 YjcZ-like protein RG60_RS16530 PF06006 Bacterial protein of unknown function (DUF905) RG60_RS16540 PF06067 Domain of unknown function (DUF932) RG60_RS16550 PF03230 Antirestriction protein RG60_RS16555 PF04002 RadC-like JAB domain RG60_RS16560 PF06174 Protein of unknown function (DUF987) RG60_RS16570 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A RG60_RS16575 PF06755 CbtA_toxin of type IV toxin-antitoxin system RG60_RS16605 PF05717 IS66 Orf2 like protein RG60_RS16640 PF00929 Exonuclease RG60_RS16645 PF00075 RNase H RG60_RS16650 PF08241 Methyltransferase domain RG60_RS16655 PF00753 Metallo-beta-lactamase superfamily RG60_RS16655 PF16123 Hydroxyacylglutathione hydrolase C-terminus RG60_RS16660 PF01476 LysM domain RG60_RS16660 PF01464 Transglycosylase SLT domain RG60_RS16665 PF08241 Methyltransferase domain RG60_RS16670 PF03372 Endonuclease/Exonuclease/phosphatase family RG60_RS16675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS16675 PF03466 LysR substrate binding domain RG60_RS16680 PF00248 Aldo/keto reductase family RG60_RS16720 PF09383 NIL domain RG60_RS16720 PF00005 ABC transporter RG60_RS16725 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS16730 PF03180 NLPA lipoprotein RG60_RS16735 PF16358 RcsF lipoprotein RG60_RS16740 PF01980 tRNA-methyltransferase O RG60_RS16740 PF18389 TrmO C-terminal domain RG60_RS16745 PF03129 Anticodon binding domain RG60_RS16745 PF04073 Aminoacyl-tRNA editing domain RG60_RS16745 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RG60_RS16750 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family RG60_RS16760 PF01548 Transposase RG60_RS16760 PF02371 Transposase IS116/IS110/IS902 family RG60_RS16765 PF04170 NlpE N-terminal domain RG60_RS16765 PF17185 NlpE C-terminal OB domain RG60_RS16770 PF00472 RF-1 domain RG60_RS16775 PF07152 YaeQ protein RG60_RS16780 PF06786 Uncharacterised protein family (UPF0253) RG60_RS16785 PF07073 Modulator of Rho-dependent transcription termination (ROF) RG60_RS16790 PF11734 TilS substrate C-terminal domain RG60_RS16790 PF01171 PP-loop family RG60_RS16790 PF09179 TilS substrate binding domain RG60_RS16795 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RG60_RS16800 PF01276 Orn/Lys/Arg decarboxylase, major domain RG60_RS16800 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RG60_RS16800 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RG60_RS16805 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RG60_RS16810 PF02811 PHP domain RG60_RS16810 PF14579 Helix-hairpin-helix motif RG60_RS16810 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RG60_RS16810 PF07733 Bacterial DNA polymerase III alpha NTPase domain RG60_RS16810 PF01336 OB-fold nucleic acid binding domain RG60_RS16815 PF01351 Ribonuclease HII RG60_RS16820 PF02684 Lipid-A-disaccharide synthetase RG60_RS16825 PF00132 Bacterial transferase hexapeptide (six repeats) RG60_RS16825 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RG60_RS16830 PF07977 FabA-like domain RG60_RS16835 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RG60_RS16835 PF00132 Bacterial transferase hexapeptide (six repeats) RG60_RS16840 PF03938 Outer membrane protein (OmpH-like) RG60_RS16845 PF01103 Surface antigen RG60_RS16845 PF07244 Surface antigen variable number repeat RG60_RS16850 PF02163 Peptidase family M50 RG60_RS16850 PF17820 PDZ domain RG60_RS16860 PF01255 Putative undecaprenyl diphosphate synthase RG60_RS16865 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RG60_RS16865 PF13288 DXP reductoisomerase C-terminal domain RG60_RS16865 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain RG60_RS16870 PF01765 Ribosome recycling factor RG60_RS16875 PF00696 Amino acid kinase family RG60_RS16880 PF00889 Elongation factor TS RG60_RS16890 PF00318 Ribosomal protein S2 RG60_RS16900 PF00557 Metallopeptidase family M24 RG60_RS16905 PF08335 GlnD PII-uridylyltransferase RG60_RS16905 PF01966 HD domain RG60_RS16905 PF01909 Nucleotidyltransferase domain RG60_RS16905 PF01842 ACT domain RG60_RS16910 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal RG60_RS16910 PF00132 Bacterial transferase hexapeptide (six repeats) RG60_RS16910 PF14602 Hexapeptide repeat of succinyl-transferase RG60_RS16915 PF11944 Protein of unknown function (DUF3461) RG60_RS16920 PF17853 GGDEF-like domain RG60_RS16920 PF13556 PucR C-terminal helix-turn-helix domain RG60_RS16920 PF05651 Putative sugar diacid recognition RG60_RS16925 PF00595 PDZ domain RG60_RS16935 PF13286 Phosphohydrolase-associated domain RG60_RS16935 PF01966 HD domain RG60_RS16940 PF01048 Phosphorylase superfamily RG60_RS16945 PF01497 Periplasmic binding protein RG60_RS16950 PF03458 UPF0126 domain RG60_RS16955 PF01521 Iron-sulphur cluster biosynthesis RG60_RS16960 PF00654 Voltage gated chloride channel RG60_RS16965 PF00202 Aminotransferase class-III RG60_RS16970 PF01032 FecCD transport family RG60_RS16975 PF01497 Periplasmic binding protein RG60_RS16980 PF00005 ABC transporter RG60_RS16985 PF00593 TonB dependent receptor RG60_RS16985 PF07715 TonB-dependent Receptor Plug Domain RG60_RS16990 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal RG60_RS16990 PF00905 Penicillin binding protein transpeptidase domain RG60_RS16990 PF14814 Bifunctional transglycosylase second domain RG60_RS16990 PF00912 Transglycosylase RG60_RS17000 PF00270 DEAD/DEAH box helicase RG60_RS17000 PF04408 Helicase associated domain (HA2) RG60_RS17000 PF00271 Helicase conserved C-terminal domain RG60_RS17000 PF08482 ATP-dependent helicase C-terminal RG60_RS17005 PF02834 LigT like Phosphoesterase RG60_RS17010 PF17746 SfsA N-terminal OB domain RG60_RS17010 PF03749 Sugar fermentation stimulation protein RE domain RG60_RS17015 PF01258 Prokaryotic dksA/traR C4-type zinc finger RG60_RS17020 PF00749 tRNA synthetases class I (E and Q), catalytic domain RG60_RS17025 PF01743 Poly A polymerase head domain RG60_RS17025 PF12627 Probable RNA and SrmB- binding site of polymerase A RG60_RS17025 PF12626 Polymerase A arginine-rich C-terminus RG60_RS17030 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RG60_RS17035 PF00419 Fimbrial protein RG60_RS17040 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG60_RS17040 PF02753 Pili assembly chaperone PapD, C-terminal domain RG60_RS17045 PF13953 PapC C-terminal domain RG60_RS17045 PF00577 Outer membrane usher protein RG60_RS17045 PF13954 PapC N-terminal domain RG60_RS17050 PF00419 Fimbrial protein RG60_RS17055 PF00419 Fimbrial protein RG60_RS17060 PF00419 Fimbrial protein RG60_RS17065 PF00419 Fimbrial protein RG60_RS17070 PF02548 Ketopantoate hydroxymethyltransferase RG60_RS17075 PF02569 Pantoate-beta-alanine ligase RG60_RS17080 PF04754 Putative transposase, YhgA-like RG60_RS17095 PF02261 Aspartate decarboxylase RG60_RS17100 PF01522 Polysaccharide deacetylase RG60_RS17105 PF03610 PTS system fructose IIA component RG60_RS17110 PF01061 ABC-2 type transporter RG60_RS17115 PF00005 ABC transporter RG60_RS17120 PF00484 Carbonic anhydrase RG60_RS17125 PF00156 Phosphoribosyl transferase domain RG60_RS17130 PF01011 PQQ enzyme repeat RG60_RS17135 PF07731 Multicopper oxidase RG60_RS17135 PF07732 Multicopper oxidase RG60_RS17135 PF00394 Multicopper oxidase RG60_RS17140 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) RG60_RS17145 PF17284 Spermidine synthase tetramerisation domain RG60_RS17150 PF02675 S-adenosylmethionine decarboxylase RG60_RS17155 PF06062 Uncharacterised protein family (UPF0231) RG60_RS17160 PF06434 Aconitate hydratase 2 N-terminus RG60_RS17160 PF00330 Aconitase family (aconitate hydratase) RG60_RS17160 PF11791 Aconitate B N-terminal domain RG60_RS17170 PF11737 Protein of unknown function (DUF3300) RG60_RS17175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RG60_RS17175 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG60_RS17180 PF02817 e3 binding domain RG60_RS17180 PF00364 Biotin-requiring enzyme RG60_RS17180 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RG60_RS17185 PF00456 Transketolase, thiamine diphosphate binding domain RG60_RS17185 PF17831 Pyruvate dehydrogenase E1 component middle domain RG60_RS17195 PF07729 FCD domain RG60_RS17195 PF00392 Bacterial regulatory proteins, gntR family RG60_RS17200 PF00324 Amino acid permease RG60_RS17205 PF17113 Regulatory signalling modulator protein AmpE RG60_RS17210 PF01510 N-acetylmuramoyl-L-alanine amidase RG60_RS17215 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RG60_RS17215 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RG60_RS17225 PF07963 Prokaryotic N-terminal methylation motif RG60_RS17230 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RG60_RS17230 PF00437 Type II/IV secretion system protein RG60_RS17235 PF00482 Type II secretion system (T2SS), protein F RG60_RS17240 PF00478 IMP dehydrogenase / GMP reductase domain RG60_RS17245 PF01121 Dephospho-CoA kinase RG60_RS17250 PF07072 Cell division protein RG60_RS17255 PF03884 DNA gyrase inhibitor YacG RG60_RS17260 PF00293 NUDIX domain RG60_RS17265 PF01043 SecA preprotein cross-linking domain RG60_RS17265 PF02810 SEC-C motif RG60_RS17265 PF07517 SecA DEAD-like domain RG60_RS17265 PF07516 SecA Wing and Scaffold domain RG60_RS17270 PF06558 Secretion monitor precursor protein (SecM) RG60_RS17275 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RG60_RS17280 PF12327 FtsZ family, C-terminal domain RG60_RS17280 PF00091 Tubulin/FtsZ family, GTPase domain RG60_RS17285 PF02491 SHS2 domain inserted in FTSA RG60_RS17290 PF03799 Cell division protein FtsQ RG60_RS17290 PF08478 POTRA domain, FtsQ-type RG60_RS17295 PF07478 D-ala D-ala ligase C-terminus RG60_RS17295 PF01820 D-ala D-ala ligase N-terminus RG60_RS17300 PF02875 Mur ligase family, glutamate ligase domain RG60_RS17300 PF01225 Mur ligase family, catalytic domain RG60_RS17300 PF08245 Mur ligase middle domain RG60_RS17305 PF03033 Glycosyltransferase family 28 N-terminal domain RG60_RS17305 PF04101 Glycosyltransferase family 28 C-terminal domain RG60_RS17310 PF01098 Cell cycle protein RG60_RS17315 PF08245 Mur ligase middle domain RG60_RS17315 PF02875 Mur ligase family, glutamate ligase domain RG60_RS17320 PF00953 Glycosyl transferase family 4 RG60_RS17320 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 RG60_RS17325 PF02875 Mur ligase family, glutamate ligase domain RG60_RS17325 PF08245 Mur ligase middle domain RG60_RS17325 PF01225 Mur ligase family, catalytic domain RG60_RS17330 PF02875 Mur ligase family, glutamate ligase domain RG60_RS17330 PF08245 Mur ligase middle domain RG60_RS17330 PF01225 Mur ligase family, catalytic domain RG60_RS17335 PF00905 Penicillin binding protein transpeptidase domain RG60_RS17335 PF03717 Penicillin-binding Protein dimerisation domain RG60_RS17340 PF04999 Cell division protein FtsL RG60_RS17345 PF01795 MraW methylase family RG60_RS17350 PF02381 MraZ protein, putative antitoxin-like RG60_RS17360 PF00356 Bacterial regulatory proteins, lacI family RG60_RS17360 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RG60_RS17370 PF10369 Small subunit of acetolactate synthase RG60_RS17375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RG60_RS17375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RG60_RS17375 PF00205 Thiamine pyrophosphate enzyme, central domain RG60_RS17380 PF03466 LysR substrate binding domain RG60_RS17380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS17385 PF08054 Leucine operon leader peptide RG60_RS17390 PF00682 HMGL-like RG60_RS17390 PF08502 LeuA allosteric (dimerisation) domain RG60_RS17395 PF00180 Isocitrate/isopropylmalate dehydrogenase RG60_RS17400 PF00330 Aconitase family (aconitate hydratase) RG60_RS17405 PF00694 Aconitase C-terminal domain RG60_RS17410 PF07690 Major Facilitator Superfamily RG60_RS17420 PF12793 Sugar transport-related sRNA regulator N-term RG60_RS17420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG60_RS17430 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS17435 PF00005 ABC transporter RG60_RS17440 PF09335 SNARE associated Golgi protein RG60_RS17445 PF02311 AraC-like ligand binding domain RG60_RS17445 PF12833 Helix-turn-helix domain RG60_RS17455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG60_RS17460 PF11762 L-arabinose isomerase C-terminal domain RG60_RS17460 PF02610 L-arabinose isomerase RG60_RS17465 PF00596 Class II Aldolase and Adducin N-terminal domain RG60_RS17470 PF00136 DNA polymerase family B RG60_RS17470 PF03104 DNA polymerase family B, exonuclease domain RG60_RS17475 PF18337 RapA N-terminal Tudor like domain RG60_RS17475 PF00271 Helicase conserved C-terminal domain RG60_RS17475 PF12137 RNA polymerase recycling family C-terminal RG60_RS17475 PF00176 SNF2 family N-terminal domain RG60_RS17475 PF18339 RapA N-terminal Tudor like domain 1 RG60_RS17480 PF00849 RNA pseudouridylate synthase RG60_RS17485 PF00226 DnaJ domain RG60_RS17485 PF05099 Tellurite resistance protein TerB RG60_RS17490 PF04453 LPS transport system D RG60_RS17490 PF03968 OstA-like protein RG60_RS17495 PF09312 SurA N-terminal domain RG60_RS17495 PF00639 PPIC-type PPIASE domain RG60_RS17500 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RG60_RS17505 PF00398 Ribosomal RNA adenine dimethylase RG60_RS17510 PF04379 ApaG domain RG60_RS17515 PF00149 Calcineurin-like phosphoesterase RG60_RS17535 PF00186 Dihydrofolate reductase RG60_RS17540 PF02254 TrkA-N domain RG60_RS17540 PF00999 Sodium/hydrogen exchanger family RG60_RS17545 PF02525 Flavodoxin-like fold RG60_RS17550 PF00083 Sugar (and other) transporter RG60_RS17560 PF01494 FAD binding domain RG60_RS17565 PF01012 Electron transfer flavoprotein domain RG60_RS17565 PF00766 Electron transfer flavoprotein FAD-binding domain RG60_RS17570 PF01012 Electron transfer flavoprotein domain RG60_RS17575 PF02028 BCCT, betaine/carnitine/choline family transporter RG60_RS17580 PF02770 Acyl-CoA dehydrogenase, middle domain RG60_RS17580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RG60_RS17580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RG60_RS17585 PF02515 CoA-transferase family III RG60_RS17590 PF13193 AMP-binding enzyme C-terminal domain RG60_RS17590 PF00501 AMP-binding enzyme RG60_RS17595 PF00378 Enoyl-CoA hydratase/isomerase RG60_RS17600 PF00132 Bacterial transferase hexapeptide (six repeats) RG60_RS17605 PF07180 CaiF/GrlA transcriptional regulator RG60_RS17615 PF02142 MGS-like domain RG60_RS17615 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RG60_RS17615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RG60_RS17620 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RG60_RS17620 PF00117 Glutamine amidotransferase class-I RG60_RS17625 PF01113 Dihydrodipicolinate reductase, N-terminus RG60_RS17625 PF05173 Dihydrodipicolinate reductase, C-terminus RG60_RS17630 PF01156 Inosine-uridine preferring nucleoside hydrolase RG60_RS17635 PF02401 LytB protein RG60_RS17640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RG60_RS17645 PF01252 Signal peptidase (SPase) II RG60_RS17650 PF08264 Anticodon-binding domain of tRNA RG60_RS17650 PF00133 tRNA synthetases class I (I, L, M and V) RG60_RS17650 PF06827 Zinc finger found in FPG and IleRS RG60_RS17655 PF06574 FAD synthetase RG60_RS17655 PF01687 Riboflavin kinase RG60_RS17660 PF10837 Protein of unknown function (DUF2575) RG60_RS17665 PF01649 Ribosomal protein S20 RG60_RS17675 PF13953 PapC C-terminal domain RG60_RS17675 PF13954 PapC N-terminal domain RG60_RS17675 PF00577 Outer membrane usher protein RG60_RS17685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS17685 PF03466 LysR substrate binding domain RG60_RS17690 PF06965 Na+/H+ antiporter 1 RG60_RS17695 PF01848 Hok/gef family RG60_RS17700 PF00226 DnaJ domain RG60_RS17700 PF01556 DnaJ C terminal domain RG60_RS17700 PF00684 DnaJ central domain RG60_RS17705 PF00012 Hsp70 protein RG60_RS17710 PF10807 Protein of unknown function (DUF2541) RG60_RS17715 PF03981 Ubiquinol-cytochrome C chaperone RG60_RS17715 PF13099 Domain of unknown function (DUF3944) RG60_RS17720 PF01184 GPR1/FUN34/yaaH family RG60_RS17725 PF00994 Probable molybdopterin binding domain RG60_RS17730 PF00923 Transaldolase/Fructose-6-phosphate aldolase RG60_RS17740 PF03883 Peroxide stress protein YaaA RG60_RS17745 PF01548 Transposase RG60_RS17745 PF02371 Transposase IS116/IS110/IS902 family RG60_RS17750 PF10697 Protein of unknown function (DUF2502) RG60_RS17760 PF14821 Threonine synthase N terminus RG60_RS17760 PF00291 Pyridoxal-phosphate dependent enzyme RG60_RS17765 PF08544 GHMP kinases C terminal RG60_RS17765 PF00288 GHMP kinases N terminal domain RG60_RS17770 PF00696 Amino acid kinase family RG60_RS17770 PF00742 Homoserine dehydrogenase RG60_RS17770 PF03447 Homoserine dehydrogenase, NAD binding domain RG60_RS17770 PF13840 ACT domain RG60_RS17770 PF01842 ACT domain RG60_RS17775 PF08254 Threonine leader peptide RG60_RS17780 PF00588 SpoU rRNA Methylase family RG60_RS17795 PF00072 Response regulator receiver domain RG60_RS17795 PF00486 Transcriptional regulatory protein, C terminal RG60_RS17800 PF06123 Inner membrane protein CreD RG60_RS17805 PF00672 HAMP domain RG60_RS17805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS17805 PF00512 His Kinase A (phospho-acceptor) domain RG60_RS17810 PF00072 Response regulator receiver domain RG60_RS17810 PF00486 Transcriptional regulatory protein, C terminal RG60_RS17815 PF05981 CreA protein RG60_RS17820 PF06445 GyrI-like small molecule binding domain RG60_RS17820 PF12833 Helix-turn-helix domain RG60_RS17825 PF00300 Histidine phosphatase superfamily (branch 1) RG60_RS17830 PF01931 Protein of unknown function DUF84 RG60_RS17835 PF01371 Trp repressor protein RG60_RS17840 PF01464 Transglycosylase SLT domain RG60_RS17840 PF14718 Soluble lytic murein transglycosylase L domain RG60_RS17850 PF12848 ABC transporter RG60_RS17850 PF00005 ABC transporter RG60_RS17860 PF13521 AAA domain RG60_RS17860 PF01381 Helix-turn-helix RG60_RS17865 PF18073 Rubredoxin metal binding domain RG60_RS17870 PF18429 Domain of unknown function (DUF5609) RG60_RS17875 PF10144 Bacterial virulence factor haemolysin RG60_RS17880 PF03099 Biotin/lipoate A/B protein ligase family RG60_RS17880 PF10437 Bacterial lipoate protein ligase C-terminus RG60_RS17890 PF01048 Phosphorylase superfamily RG60_RS17895 PF01676 Metalloenzyme superfamily RG60_RS17900 PF00591 Glycosyl transferase family, a/b domain RG60_RS17900 PF02885 Glycosyl transferase family, helical bundle domain RG60_RS17900 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain RG60_RS17905 PF01791 DeoC/LacD family aldolase RG60_RS17915 PF11230 Protein of unknown function (DUF3029) RG60_RS17920 PF04055 Radical SAM superfamily RG60_RS17925 PF01026 TatD related DNase RG60_RS17930 PF01734 Patatin-like phospholipase RG60_RS17935 PF07043 Protein of unknown function (DUF1328) RG60_RS17940 PF04972 BON domain RG60_RS17945 PF03144 Elongation factor Tu domain 2 RG60_RS17945 PF16658 Class II release factor RF3, C-terminal domain RG60_RS17945 PF00009 Elongation factor Tu GTP binding domain RG60_RS17950 PF13419 Haloacid dehalogenase-like hydrolase RG60_RS17955 PF00583 Acetyltransferase (GNAT) family RG60_RS17960 PF03603 DNA polymerase III psi subunit RG60_RS17965 PF08468 Methyltransferase small domain N-terminal RG60_RS17965 PF05175 Methyltransferase small domain RG60_RS17990 PF07256 Protein of unknown function (DUF1435) RG60_RS17995 PF06276 Ferric iron reductase FhuF-like transporter RG60_RS17995 PF11575 FhuF 2Fe-2S C-terminal domain RG60_RS18000 PF00196 Bacterial regulatory proteins, luxR family RG60_RS18005 PF00196 Bacterial regulatory proteins, luxR family RG60_RS18010 PF06738 Putative threonine/serine exporter RG60_RS18015 PF12821 Threonine/Serine exporter, ThrE RG60_RS18020 PF17948 DnaT DNA-binding domain RG60_RS18025 PF01695 IstB-like ATP binding protein RG60_RS18030 PF10696 Protein of unknown function (DUF2501) RG60_RS18035 PF00884 Sulfatase RG60_RS18040 PF08240 Alcohol dehydrogenase GroES-like domain RG60_RS18040 PF00107 Zinc-binding dehydrogenase RG60_RS18045 PF00392 Bacterial regulatory proteins, gntR family RG60_RS18045 PF07729 FCD domain RG60_RS18050 PF00392 Bacterial regulatory proteins, gntR family RG60_RS18050 PF07729 FCD domain RG60_RS18055 PF07690 Major Facilitator Superfamily RG60_RS18060 PF02203 Tar ligand binding domain homologue RG60_RS18060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RG60_RS18060 PF00672 HAMP domain RG60_RS18065 PF01047 MarR family RG60_RS18070 PF01557 Fumarylacetoacetate (FAA) hydrolase family RG60_RS18075 PF00171 Aldehyde dehydrogenase family RG60_RS18080 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RG60_RS18085 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase RG60_RS18090 PF01557 Fumarylacetoacetate (FAA) hydrolase family RG60_RS18095 PF03328 HpcH/HpaI aldolase/citrate lyase family RG60_RS18100 PF07690 Major Facilitator Superfamily RG60_RS18110 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal RG60_RS18110 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal RG60_RS18115 PF01613 Flavin reductase like domain RG60_RS18120 PF13722 5TM C-terminal transporter carbon starvation CstA RG60_RS18120 PF02554 Carbon starvation protein CstA RG60_RS18125 PF04328 Selenoprotein, putative RG60_RS18130 PF07683 Cobalamin synthesis protein cobW C-terminal domain RG60_RS18130 PF02492 CobW/HypB/UreG, nucleotide-binding domain RG60_RS18140 PF06568 Domain of unknown function (DUF1127) RG60_RS18145 PF00392 Bacterial regulatory proteins, gntR family RG60_RS18145 PF00155 Aminotransferase class I and II RG60_RS18150 PF04754 Putative transposase, YhgA-like RG60_RS18155 PF07690 Major Facilitator Superfamily RG60_RS18160 PF04286 Protein of unknown function (DUF445) RG60_RS18165 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component RG60_RS18170 PF01869 BadF/BadG/BcrA/BcrD ATPase family RG60_RS18175 PF11823 Protein of unknown function (DUF3343) RG60_RS18180 PF06977 SdiA-regulated RG60_RS18185 PF06779 Uncharacterised MFS-type transporter YbfB RG60_RS18190 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family RG60_RS18200 PF07670 Nucleoside recognition RG60_RS18205 PF07670 Nucleoside recognition RG60_RS18210 PF01979 Amidohydrolase family RG60_RS18215 PF03466 LysR substrate binding domain RG60_RS18215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS18220 PF04965 Gene 25-like lysozyme RG60_RS18230 PF10887 Protein of unknown function (DUF2686) RG60_RS18235 PF00392 Bacterial regulatory proteins, gntR family RG60_RS18235 PF07729 FCD domain RG60_RS18245 PF01232 Mannitol dehydrogenase Rossmann domain RG60_RS18245 PF08125 Mannitol dehydrogenase C-terminal domain RG60_RS18250 PF03786 D-mannonate dehydratase (UxuA) RG60_RS18260 PF02447 GntP family permease RG60_RS18265 PF09160 FimH, mannose binding RG60_RS18265 PF00419 Fimbrial protein RG60_RS18275 PF00419 Fimbrial protein RG60_RS18280 PF13953 PapC C-terminal domain RG60_RS18280 PF00577 Outer membrane usher protein RG60_RS18280 PF13954 PapC N-terminal domain RG60_RS18285 PF02753 Pili assembly chaperone PapD, C-terminal domain RG60_RS18285 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG60_RS18290 PF00419 Fimbrial protein RG60_RS18295 PF00419 Fimbrial protein RG60_RS18310 PF00589 Phage integrase family RG60_RS18315 PF00589 Phage integrase family RG60_RS18330 PF06178 Oligogalacturonate-specific porin protein (KdgM) RG60_RS18340 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase RG60_RS18350 PF12102 Domain of unknown function (DUF3578) RG60_RS18350 PF07728 AAA domain (dynein-related subfamily) RG60_RS18375 PF01527 Transposase RG60_RS18380 PF00665 Integrase core domain RG60_RS18380 PF13333 Integrase core domain RG60_RS18380 PF13276 HTH-like domain RG60_RS18420 PF03793 PASTA domain RG60_RS18420 PF00069 Protein kinase domain RG60_RS18425 PF00589 Phage integrase family RG60_RS18425 PF13356 Arm DNA-binding domain RG60_RS18445 PF17345 Family of unknown function (DUF5375) RG60_RS18495 PF00589 Phage integrase family RG60_RS18495 PF13356 Arm DNA-binding domain RG60_RS18505 PF08240 Alcohol dehydrogenase GroES-like domain RG60_RS18505 PF00107 Zinc-binding dehydrogenase RG60_RS18510 PF01202 Shikimate kinase RG60_RS18520 PF08240 Alcohol dehydrogenase GroES-like domain RG60_RS18520 PF00107 Zinc-binding dehydrogenase RG60_RS18525 PF00106 short chain dehydrogenase RG60_RS18530 PF02447 GntP family permease RG60_RS18535 PF00356 Bacterial regulatory proteins, lacI family RG60_RS18540 PF05872 Bacterial protein of unknown function (DUF853) RG60_RS18545 PF03739 Lipopolysaccharide export system permease LptF/LptG RG60_RS18550 PF03739 Lipopolysaccharide export system permease LptF/LptG RG60_RS18555 PF00883 Cytosol aminopeptidase family, catalytic domain RG60_RS18555 PF02789 Cytosol aminopeptidase family, N-terminal domain RG60_RS18560 PF04364 DNA polymerase III chi subunit, HolC RG60_RS18565 PF00133 tRNA synthetases class I (I, L, M and V) RG60_RS18565 PF10458 Valyl tRNA synthetase tRNA binding arm RG60_RS18565 PF08264 Anticodon-binding domain of tRNA RG60_RS18570 PF05987 Bacterial protein of unknown function (DUF898) RG60_RS18575 PF00583 Acetyltransferase (GNAT) family RG60_RS18580 PF06877 Regulator of ribonuclease activity B RG60_RS18585 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RG60_RS18585 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RG60_RS18595 PF04074 YhcH/YjgK/YiaL RG60_RS18600 PF00440 Bacterial regulatory proteins, tetR family RG60_RS18610 PF01042 Endoribonuclease L-PSP RG60_RS18620 PF08052 PyrBI operon leader peptide RG60_RS18625 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RG60_RS18625 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RG60_RS18630 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain RG60_RS18630 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain RG60_RS18635 PF01042 Endoribonuclease L-PSP RG60_RS18640 PF01548 Transposase RG60_RS18640 PF02371 Transposase IS116/IS110/IS902 family RG60_RS18645 PF00690 Cation transporter/ATPase, N-terminus RG60_RS18645 PF00689 Cation transporting ATPase, C-terminus RG60_RS18650 PF00356 Bacterial regulatory proteins, lacI family RG60_RS18655 PF02378 Phosphotransferase system, EIIC RG60_RS18655 PF00367 phosphotransferase system, EIIB RG60_RS18660 PF00128 Alpha amylase, catalytic domain RG60_RS18660 PF11941 Domain of unknown function (DUF3459) RG60_RS18665 PF13597 Anaerobic ribonucleoside-triphosphate reductase RG60_RS18665 PF03477 ATP cone domain RG60_RS18675 PF07361 Cytochrome b562 RG60_RS18680 PF01523 Putative modulator of DNA gyrase RG60_RS18685 PF04751 Protein of unknown function (DUF615) RG60_RS18690 PF02875 Mur ligase family, glutamate ligase domain RG60_RS18690 PF01225 Mur ligase family, catalytic domain RG60_RS18690 PF08245 Mur ligase middle domain RG60_RS18695 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain RG60_RS18700 PF02653 Branched-chain amino acid transport system / permease component RG60_RS18705 PF02653 Branched-chain amino acid transport system / permease component RG60_RS18710 PF00005 ABC transporter RG60_RS18715 PF13407 Periplasmic binding protein domain RG60_RS18720 PF00719 Inorganic pyrophosphatase RG60_RS18725 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RG60_RS18730 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin RG60_RS18735 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like RG60_RS18740 PF04357 TamB, inner membrane protein subunit of TAM complex RG60_RS18745 PF17243 POTRA domain TamA domain 1 RG60_RS18745 PF07244 Surface antigen variable number repeat RG60_RS18745 PF01103 Surface antigen RG60_RS18755 PF01625 Peptide methionine sulfoxide reductase RG60_RS18760 PF03471 Transporter associated domain RG60_RS18760 PF01595 Cyclin M transmembrane N-terminal domain RG60_RS18760 PF00571 CBS domain RG60_RS18765 PF06526 Protein of unknown function (DUF1107) RG60_RS18770 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) RG60_RS18775 PF00459 Inositol monophosphatase family RG60_RS18785 PF01638 HxlR-like helix-turn-helix RG60_RS18790 PF05368 NmrA-like family RG60_RS18795 PF00892 EamA-like transporter family RG60_RS18800 PF01814 Hemerythrin HHE cation binding domain RG60_RS18800 PF04405 Domain of Unknown function (DUF542) RG60_RS18805 PF00324 Amino acid permease RG60_RS18810 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase RG60_RS18810 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RG60_RS18820 PF04225 Opacity-associated protein A LysM-like domain RG60_RS18820 PF08525 Opacity-associated protein A N-terminal motif RG60_RS18825 PF17938 Tetracyclin repressor-like, C-terminal domain RG60_RS18830 PF12323 Helix-turn-helix domain RG60_RS18830 PF01385 Probable transposase RG60_RS18830 PF07282 Putative transposase DNA-binding domain RG60_RS18835 PF01797 Transposase IS200 like RG60_RS18840 PF17938 Tetracyclin repressor-like, C-terminal domain RG60_RS18845 PF10887 Protein of unknown function (DUF2686) RG60_RS18850 PF01281 Ribosomal protein L9, N-terminal domain RG60_RS18850 PF03948 Ribosomal protein L9, C-terminal domain RG60_RS18855 PF01084 Ribosomal protein S18 RG60_RS18860 PF00436 Single-strand binding protein family RG60_RS18865 PF01250 Ribosomal protein S6 RG60_RS18875 PF07338 Protein of unknown function (DUF1471) RG60_RS18880 PF07274 Protein of unknown function (DUF1440) RG60_RS18885 PF00596 Class II Aldolase and Adducin N-terminal domain RG60_RS18890 PF01261 Xylose isomerase-like TIM barrel RG60_RS18895 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RG60_RS18900 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG60_RS18905 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG60_RS18910 PF03611 PTS system sugar-specific permease component RG60_RS18920 PF08220 DeoR-like helix-turn-helix domain RG60_RS18920 PF00455 DeoR C terminal sensor domain RG60_RS18925 PF00326 Prolyl oligopeptidase family RG60_RS18930 PF07338 Protein of unknown function (DUF1471) RG60_RS18935 PF07338 Protein of unknown function (DUF1471) RG60_RS18945 PF18158 Adaptive response protein AidB N-terminal domain RG60_RS18945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RG60_RS18945 PF02770 Acyl-CoA dehydrogenase, middle domain RG60_RS18950 PF03738 Glutathionylspermidine synthase preATP-grasp RG60_RS18955 PF06693 Protein of unknown function (DUF1190) RG60_RS18960 PF03994 Domain of Unknown Function (DUF350) RG60_RS18965 PF10679 Protein of unknown function (DUF2491) RG60_RS18970 PF04012 PspA/IM30 family RG60_RS18975 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) RG60_RS18980 PF00588 SpoU rRNA Methylase family RG60_RS18980 PF08032 RNA 2'-O ribose methyltransferase substrate binding RG60_RS18985 PF08206 Ribonuclease B OB domain RG60_RS18985 PF00773 RNB domain RG60_RS18985 PF00575 S1 RNA binding domain RG60_RS18985 PF17876 Cold shock domain RG60_RS18985 PF08461 Ribonuclease R winged-helix domain RG60_RS18990 PF02082 Transcriptional regulator RG60_RS18995 PF00709 Adenylosuccinate synthetase RG60_RS19000 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) RG60_RS19005 PF01145 SPFH domain / Band 7 family RG60_RS19010 PF01145 SPFH domain / Band 7 family RG60_RS19010 PF12221 Bacterial membrane protein N terminal RG60_RS19015 PF13167 GTP-binding GTPase N-terminal RG60_RS19015 PF16360 GTP-binding GTPase Middle Region RG60_RS19015 PF01926 50S ribosome-binding GTPase RG60_RS19020 PF17209 Hfq protein RG60_RS19030 PF01119 DNA mismatch repair protein, C-terminal domain RG60_RS19030 PF08676 MutL C terminal dimerisation domain RG60_RS19035 PF01520 N-acetylmuramoyl-L-alanine amidase RG60_RS19040 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE RG60_RS19045 PF01256 Carbohydrate kinase RG60_RS19045 PF03853 YjeF-related protein N-terminus RG60_RS19050 PF08331 Domain of unknown function (DUF1730) RG60_RS19070 PF00929 Exonuclease RG60_RS19075 PF03193 RsgA GTPase RG60_RS19080 PF02666 Phosphatidylserine decarboxylase RG60_RS19085 PF00924 Mechanosensitive ion channel RG60_RS19085 PF12794 Mechanosensitive ion channel inner membrane domain 1 RG60_RS19085 PF12795 Mechanosensitive ion channel porin domain RG60_RS19090 PF13520 Amino acid permease RG60_RS19095 PF00152 tRNA synthetases class II (D, K and N) RG60_RS19100 PF00890 FAD binding domain RG60_RS19100 PF02910 Fumarate reductase flavoprotein C-term RG60_RS19105 PF13183 4Fe-4S dicluster domain RG60_RS19105 PF13085 2Fe-2S iron-sulfur cluster binding domain RG60_RS19110 PF02300 Fumarate reductase subunit C RG60_RS19115 PF02313 Fumarate reductase subunit D RG60_RS19120 PF00144 Beta-lactamase RG60_RS19125 PF08212 Lipocalin-like domain RG60_RS19130 PF00893 Small Multidrug Resistance protein RG60_RS19135 PF08085 Entericidin EcnA/B family RG60_RS19140 PF08085 Entericidin EcnA/B family RG60_RS19145 PF09285 Elongation factor P, C-terminal RG60_RS19145 PF08207 Elongation factor P (EF-P) KOW-like domain RG60_RS19145 PF01132 Elongation factor P (EF-P) OB domain RG60_RS19150 PF04055 Radical SAM superfamily RG60_RS19155 PF15922 YjeJ-like RG60_RS19160 PF01548 Transposase RG60_RS19160 PF02371 Transposase IS116/IS110/IS902 family RG60_RS19165 PF13698 Domain of unknown function (DUF4156) RG60_RS19170 PF00118 TCP-1/cpn60 chaperonin family RG60_RS19175 PF00166 Chaperonin 10 Kd subunit RG60_RS19180 PF13520 Amino acid permease RG60_RS19185 PF04186 FxsA cytoplasmic membrane protein RG60_RS19195 PF10415 Fumarase C C-terminus RG60_RS19195 PF00206 Lyase RG60_RS19200 PF03605 Anaerobic c4-dicarboxylate membrane transporter RG60_RS19205 PF03091 CutA1 divalent ion tolerance protein RG60_RS19210 PF11412 Disulphide bond corrector protein DsbC RG60_RS19210 PF02683 Cytochrome C biogenesis protein transmembrane region RG60_RS19230 PF00486 Transcriptional regulatory protein, C terminal RG60_RS19230 PF18500 CadC C-terminal domain 1 RG60_RS19235 PF13520 Amino acid permease RG60_RS19240 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RG60_RS19240 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RG60_RS19240 PF01276 Orn/Lys/Arg decarboxylase, major domain RG60_RS19245 PF00854 POT family RG60_RS19250 PF01336 OB-fold nucleic acid binding domain RG60_RS19250 PF00152 tRNA synthetases class II (D, K and N) RG60_RS19255 PF10753 Toxin GhoT_OrtT RG60_RS19260 PF11080 Endoribonuclease GhoS RG60_RS19270 PF14542 GCN5-related N-acetyl-transferase RG60_RS19275 PF06902 Divergent 4Fe-4S mono-cluster RG60_RS19280 PF17203 Single cache domain 3 RG60_RS19280 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain RG60_RS19280 PF00989 PAS fold RG60_RS19280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS19285 PF00072 Response regulator receiver domain RG60_RS19295 PF03605 Anaerobic c4-dicarboxylate membrane transporter RG60_RS19300 PF05683 Fumarase C-terminus RG60_RS19300 PF05681 Fumarate hydratase (Fumerase) RG60_RS19305 PF09997 Predicted membrane protein (DUF2238) RG60_RS19315 PF02056 Family 4 glycosyl hydrolase RG60_RS19315 PF11975 Family 4 glycosyl hydrolase C-terminal domain RG60_RS19325 PF12833 Helix-turn-helix domain RG60_RS19330 PF01276 Orn/Lys/Arg decarboxylase, major domain RG60_RS19330 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RG60_RS19330 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RG60_RS19335 PF12833 Helix-turn-helix domain RG60_RS19340 PF13520 Amino acid permease RG60_RS19345 PF08019 Phosphoethanolamine transferase EptA/EptB RG60_RS19345 PF00884 Sulfatase RG60_RS19350 PF00486 Transcriptional regulatory protein, C terminal RG60_RS19350 PF00072 Response regulator receiver domain RG60_RS19355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS19355 PF00512 His Kinase A (phospho-acceptor) domain RG60_RS19365 PF08946 Osmosensory transporter coiled coil RG60_RS19365 PF00083 Sugar (and other) transporter RG60_RS19370 PF13990 YjcZ-like protein RG60_RS19375 PF00350 Dynamin family RG60_RS19385 PF03831 PhnA domain RG60_RS19385 PF08274 PhnA Zinc-Ribbon RG60_RS19390 PF06983 3-demethylubiquinone-9 3-methyltransferase RG60_RS19395 PF00005 ABC transporter RG60_RS19405 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS19410 PF00392 Bacterial regulatory proteins, gntR family RG60_RS19410 PF07702 UTRA domain RG60_RS19415 PF06754 Phosphonate metabolism protein PhnG RG60_RS19420 PF05845 Bacterial phosphonate metabolism protein (PhnH) RG60_RS19425 PF05861 Bacterial phosphonate metabolism protein (PhnI) RG60_RS19430 PF06007 Phosphonate metabolism protein PhnJ RG60_RS19435 PF00005 ABC transporter RG60_RS19445 PF00005 ABC transporter RG60_RS19450 PF07969 Amidohydrolase family RG60_RS19460 PF00583 Acetyltransferase (GNAT) family RG60_RS19465 PF12706 Beta-lactamase superfamily domain RG60_RS19475 PF02502 Ribose/Galactose Isomerase RG60_RS19480 PF14864 Alkyl sulfatase C-terminal RG60_RS19480 PF14863 Alkyl sulfatase dimerisation RG60_RS19480 PF00753 Metallo-beta-lactamase superfamily RG60_RS19485 PF17090 Uncharacterised protein family RG60_RS19490 PF00529 HlyD membrane-fusion protein of T1SS RG60_RS19490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG60_RS19495 PF04632 Fusaric acid resistance protein family RG60_RS19500 PF02321 Outer membrane efflux protein RG60_RS19505 PF00384 Molybdopterin oxidoreductase RG60_RS19505 PF01568 Molydopterin dinucleotide binding domain RG60_RS19505 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RG60_RS19510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RG60_RS19510 PF00384 Molybdopterin oxidoreductase RG60_RS19510 PF01568 Molydopterin dinucleotide binding domain RG60_RS19515 PF08238 Sel1 repeat RG60_RS19520 PF00375 Sodium:dicarboxylate symporter family RG60_RS19535 PF03918 Cytochrome C biogenesis protein RG60_RS19540 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal RG60_RS19540 PF01578 Cytochrome C assembly protein RG60_RS19545 PF03916 Polysulphide reductase, NrfD RG60_RS19550 PF00037 4Fe-4S binding domain RG60_RS19550 PF13247 4Fe-4S dicluster domain RG60_RS19555 PF13435 Cytochrome c554 and c-prime RG60_RS19555 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) RG60_RS19560 PF02335 Cytochrome c552 RG60_RS19570 PF00501 AMP-binding enzyme RG60_RS19570 PF13193 AMP-binding enzyme C-terminal domain RG60_RS19570 PF16177 Acetyl-coenzyme A synthetase N-terminus RG60_RS19575 PF04341 Protein of unknown function, DUF485 RG60_RS19580 PF00474 Sodium:solute symporter family RG60_RS19585 PF00805 Pentapeptide repeats (8 copies) RG60_RS19590 PF00999 Sodium/hydrogen exchanger family RG60_RS19595 PF00860 Permease family RG60_RS19615 PF00376 MerR family regulatory protein RG60_RS19615 PF09278 MerR, DNA binding RG60_RS19620 PF12833 Helix-turn-helix domain RG60_RS19625 PF12792 CSS motif domain associated with EAL RG60_RS19625 PF00563 EAL domain RG60_RS19635 PF15940 Family of unknown function RG60_RS19640 PF00436 Single-strand binding protein family RG60_RS19645 PF17760 UvrA interaction domain RG60_RS19645 PF17755 UvrA DNA-binding domain RG60_RS19645 PF00005 ABC transporter RG60_RS19650 PF04237 YjbR RG60_RS19655 PF01894 Uncharacterised protein family UPF0047 RG60_RS19660 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) RG60_RS19670 PF00155 Aminotransferase class I and II RG60_RS19675 PF01168 Alanine racemase, N-terminal domain RG60_RS19675 PF00842 Alanine racemase, C-terminal domain RG60_RS19680 PF03796 DnaB-like helicase C terminal domain RG60_RS19680 PF00772 DnaB-like helicase N terminal domain RG60_RS19685 PF08240 Alcohol dehydrogenase GroES-like domain RG60_RS19685 PF00107 Zinc-binding dehydrogenase RG60_RS19690 PF09583 Phage shock protein G (Phageshock_PspG) RG60_RS19695 PF01207 Dihydrouridine synthase (Dus) RG60_RS19700 PF10897 Protein of unknown function (DUF2713) RG60_RS19710 PF01475 Ferric uptake regulator family RG60_RS19715 PF05532 CsbD-like RG60_RS19720 PF01554 MatE RG60_RS19725 PF01726 LexA DNA binding domain RG60_RS19725 PF00717 Peptidase S24-like RG60_RS19730 PF01219 Prokaryotic diacylglycerol kinase RG60_RS19735 PF01553 Acyltransferase RG60_RS19740 PF01040 UbiA prenyltransferase family RG60_RS19745 PF04345 Chorismate lyase RG60_RS19755 PF13599 Pentapeptide repeats (9 copies) RG60_RS19755 PF13981 SopA-like central domain RG60_RS19765 PF07148 Maltose operon periplasmic protein precursor (MalM) RG60_RS19770 PF02264 LamB porin RG60_RS19775 PF00005 ABC transporter RG60_RS19775 PF17912 MalK OB fold domain RG60_RS19785 PF01547 Bacterial extracellular solute-binding protein RG60_RS19790 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS19790 PF14785 Maltose transport system permease protein MalF P2 domain RG60_RS19795 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS19800 PF00083 Sugar (and other) transporter RG60_RS19805 PF06146 Phosphate-starvation-inducible E RG60_RS19810 PF17089 Uncharacterised protein family RG60_RS19815 PF06082 Exopolysaccharide biosynthesis protein YbjH RG60_RS19820 PF06251 Capsule biosynthesis GfcC RG60_RS19825 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF RG60_RS19830 PF11106 Exopolysaccharide production protein YjbE RG60_RS19835 PF00342 Phosphoglucose isomerase RG60_RS19845 PF00696 Amino acid kinase family RG60_RS19845 PF01842 ACT domain RG60_RS19850 PF06414 Zeta toxin RG60_RS19855 PF10127 RNA repair pathway DNA polymerase beta family RG60_RS19865 PF11656 YjbD family (DUF3811) RG60_RS19870 PF00849 RNA pseudouridylate synthase RG60_RS19870 PF01479 S4 domain RG60_RS19875 PF03575 Peptidase family S51 RG60_RS19880 PF02690 Na+/Pi-cotransporter RG60_RS19885 PF02607 B12 binding domain RG60_RS19885 PF02574 Homocysteine S-methyltransferase RG60_RS19885 PF02310 B12 binding domain RG60_RS19885 PF00809 Pterin binding enzyme RG60_RS19885 PF02965 Vitamin B12 dependent methionine synthase, activation domain RG60_RS19890 PF01614 Bacterial transcriptional regulator RG60_RS19890 PF09339 IclR helix-turn-helix domain RG60_RS19895 PF07906 ShET2 enterotoxin, N-terminal region RG60_RS19900 PF07906 ShET2 enterotoxin, N-terminal region RG60_RS19905 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) RG60_RS19915 PF00463 Isocitrate lyase family RG60_RS19920 PF01274 Malate synthase RG60_RS19925 PF04204 Homoserine O-succinyltransferase RG60_RS19930 PF13673 Acetyltransferase (GNAT) domain RG60_RS19965 PF02142 MGS-like domain RG60_RS19965 PF01808 AICARFT/IMPCHase bienzyme RG60_RS19970 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RG60_RS19970 PF02844 Phosphoribosylglycinamide synthetase, N domain RG60_RS19970 PF02843 Phosphoribosylglycinamide synthetase, C domain RG60_RS19975 PF00158 Sigma-54 interaction domain RG60_RS19975 PF00072 Response regulator receiver domain RG60_RS19975 PF02954 Bacterial regulatory protein, Fis family RG60_RS19980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS19980 PF00512 His Kinase A (phospho-acceptor) domain RG60_RS19990 PF13801 Heavy-metal resistance RG60_RS19995 PF07356 Protein of unknown function (DUF1481) RG60_RS20000 PF00216 Bacterial DNA-binding protein RG60_RS20005 PF04222 Protein of unknown function (DUF416) RG60_RS20010 PF04493 Endonuclease V RG60_RS20015 PF01208 Uroporphyrinogen decarboxylase (URO-D) RG60_RS20020 PF00293 NUDIX domain RG60_RS20020 PF09297 NADH pyrophosphatase zinc ribbon domain RG60_RS20025 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ RG60_RS20030 PF01964 Radical SAM ThiC family RG60_RS20030 PF13667 ThiC-associated domain RG60_RS20035 PF02581 Thiamine monophosphate synthase RG60_RS20040 PF00899 ThiF family RG60_RS20045 PF02597 ThiS family RG60_RS20050 PF05690 Thiazole biosynthesis protein ThiG RG60_RS20055 PF04055 Radical SAM superfamily RG60_RS20055 PF06968 Biotin and Thiamin Synthesis associated domain RG60_RS20065 PF04997 RNA polymerase Rpb1, domain 1 RG60_RS20065 PF00623 RNA polymerase Rpb1, domain 2 RG60_RS20065 PF04983 RNA polymerase Rpb1, domain 3 RG60_RS20065 PF04998 RNA polymerase Rpb1, domain 5 RG60_RS20065 PF05000 RNA polymerase Rpb1, domain 4 RG60_RS20070 PF10385 RNA polymerase beta subunit external 1 domain RG60_RS20070 PF00562 RNA polymerase Rpb2, domain 6 RG60_RS20070 PF04565 RNA polymerase Rpb2, domain 3 RG60_RS20070 PF04561 RNA polymerase Rpb2, domain 2 RG60_RS20070 PF04563 RNA polymerase beta subunit RG60_RS20070 PF04560 RNA polymerase Rpb2, domain 7 RG60_RS20075 PF16320 Ribosomal protein L7/L12 dimerisation domain RG60_RS20075 PF00542 Ribosomal protein L7/L12 C-terminal domain RG60_RS20080 PF00466 Ribosomal protein L10 RG60_RS20090 PF00687 Ribosomal protein L1p/L10e family RG60_RS20095 PF00298 Ribosomal protein L11, RNA binding domain RG60_RS20095 PF03946 Ribosomal protein L11, N-terminal domain RG60_RS20100 PF02357 Transcription termination factor nusG RG60_RS20100 PF00467 KOW motif RG60_RS20105 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RG60_RS20110 PF00009 Elongation factor Tu GTP binding domain RG60_RS20110 PF03143 Elongation factor Tu C-terminal domain RG60_RS20110 PF03144 Elongation factor Tu domain 2 RG60_RS20145 PF00485 Phosphoribulokinase / Uridine kinase family RG60_RS20150 PF02237 Biotin protein ligase C terminal domain RG60_RS20150 PF08279 HTH domain RG60_RS20150 PF03099 Biotin/lipoate A/B protein ligase family RG60_RS20155 PF01565 FAD binding domain RG60_RS20155 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RG60_RS20185 PF01177 Asp/Glu/Hydantoin racemase RG60_RS20190 PF00593 TonB dependent receptor RG60_RS20190 PF07715 TonB-dependent Receptor Plug Domain RG60_RS20195 PF05958 tRNA (Uracil-5-)-methyltransferase RG60_RS20200 PF07226 Protein of unknown function (DUF1422) RG60_RS20205 PF00440 Bacterial regulatory proteins, tetR family RG60_RS20215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RG60_RS20215 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG60_RS20220 PF03466 LysR substrate binding domain RG60_RS20220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS20225 PF00206 Lyase RG60_RS20225 PF14698 Argininosuccinate lyase C-terminal RG60_RS20230 PF00696 Amino acid kinase family RG60_RS20235 PF01118 Semialdehyde dehydrogenase, NAD binding domain RG60_RS20235 PF02774 Semialdehyde dehydrogenase, dimerisation domain RG60_RS20240 PF01546 Peptidase family M20/M25/M40 RG60_RS20240 PF07687 Peptidase dimerisation domain RG60_RS20245 PF00311 Phosphoenolpyruvate carboxylase RG60_RS20250 PF00884 Sulfatase RG60_RS20255 PF12833 Helix-turn-helix domain RG60_RS20260 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG60_RS20265 PF04055 Radical SAM superfamily RG60_RS20270 PF01228 Glycine radical RG60_RS20270 PF02901 Pyruvate formate lyase-like RG60_RS20275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG60_RS20285 PF00381 PTS HPr component phosphorylation site RG60_RS20285 PF02896 PEP-utilising enzyme, TIM barrel domain RG60_RS20285 PF05524 PEP-utilising enzyme, N-terminal RG60_RS20285 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG60_RS20285 PF00391 PEP-utilising enzyme, mobile domain RG60_RS20290 PF00923 Transaldolase/Fructose-6-phosphate aldolase RG60_RS20295 PF00465 Iron-containing alcohol dehydrogenase RG60_RS20305 PF06940 Domain of unknown function (DUF1287) RG60_RS20310 PF00892 EamA-like transporter family RG60_RS20315 PF00141 Peroxidase RG60_RS20320 PF02219 Methylenetetrahydrofolate reductase RG60_RS20330 PF03447 Homoserine dehydrogenase, NAD binding domain RG60_RS20330 PF00742 Homoserine dehydrogenase RG60_RS20330 PF00696 Amino acid kinase family RG60_RS20335 PF01053 Cys/Met metabolism PLP-dependent enzyme RG60_RS20345 PF01340 Met Apo-repressor, MetJ RG60_RS20350 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family RG60_RS20360 PF12759 InsA C-terminal domain RG60_RS20360 PF03811 InsA N-terminal domain RG60_RS20365 PF03400 IS1 transposase RG60_RS20370 PF03400 IS1 transposase RG60_RS20380 PF14220 Domain of unknown function (DUF4329) RG60_RS20380 PF03527 RHS protein RG60_RS20380 PF05593 RHS Repeat RG60_RS20385 PF01197 Ribosomal protein L31 RG60_RS20390 PF00270 DEAD/DEAH box helicase RG60_RS20390 PF18319 PriA DNA helicase Cys-rich region (CRR) domain RG60_RS20390 PF18074 Primosomal protein N C-terminal domain RG60_RS20390 PF17764 3′ DNA-binding domain (3′BD) RG60_RS20390 PF00271 Helicase conserved C-terminal domain RG60_RS20395 PF00356 Bacterial regulatory proteins, lacI family RG60_RS20400 PF05036 Sporulation related domain RG60_RS20405 PF00227 Proteasome subunit RG60_RS20410 PF07724 AAA domain (Cdc48 subfamily) RG60_RS20410 PF00004 ATPase family associated with various cellular activities (AAA) RG60_RS20410 PF10431 C-terminal, D2-small domain, of ClpB protein RG60_RS20415 PF01040 UbiA prenyltransferase family RG60_RS20420 PF03737 Aldolase/RraA RG60_RS20425 PF06005 Cell division protein ZapB RG60_RS20430 PF00230 Major intrinsic protein RG60_RS20435 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RG60_RS20435 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG60_RS20440 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded RG60_RS20445 PF00175 Oxidoreductase NAD-binding domain RG60_RS20445 PF00970 Oxidoreductase FAD-binding domain RG60_RS20450 PF00582 Universal stress protein family RG60_RS20455 PF04175 Protein of unknown function (DUF406) RG60_RS20460 PF05656 Protein of unknown function (DUF805) RG60_RS20465 PF07305 Protein of unknown function (DUF1454) RG60_RS20475 PF00121 Triosephosphate isomerase RG60_RS20480 PF02611 CDP-diacylglycerol pyrophosphatase RG60_RS20490 PF01548 Transposase RG60_RS20490 PF02371 Transposase IS116/IS110/IS902 family RG60_RS20495 PF00365 Phosphofructokinase RG60_RS20500 PF01545 Cation efflux family RG60_RS20500 PF16916 Dimerisation domain of Zinc Transporter RG60_RS20505 PF07813 LTXXQ motif family protein RG60_RS20510 PF00486 Transcriptional regulatory protein, C terminal RG60_RS20510 PF00072 Response regulator receiver domain RG60_RS20515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS20515 PF00672 HAMP domain RG60_RS20515 PF16527 Two-component sensor protein CpxA, periplasmic domain RG60_RS20515 PF00512 His Kinase A (phospho-acceptor) domain RG60_RS20520 PF03475 3-alpha domain RG60_RS20520 PF03473 MOSC domain RG60_RS20525 PF03812 2-keto-3-deoxygluconate permease RG60_RS20540 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RG60_RS20540 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RG60_RS20545 PF06379 L-rhamnose-proton symport protein (RhaT) RG60_RS20550 PF02311 AraC-like ligand binding domain RG60_RS20550 PF12833 Helix-turn-helix domain RG60_RS20555 PF02311 AraC-like ligand binding domain RG60_RS20555 PF12833 Helix-turn-helix domain RG60_RS20565 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG60_RS20565 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RG60_RS20570 PF06134 L-rhamnose isomerase (RhaA) RG60_RS20575 PF00596 Class II Aldolase and Adducin N-terminal domain RG60_RS20580 PF05336 L-rhamnose mutarotase RG60_RS20585 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG60_RS20590 PF02378 Phosphotransferase system, EIIC RG60_RS20590 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG60_RS20595 PF05343 M42 glutamyl aminopeptidase RG60_RS20600 PF08279 HTH domain RG60_RS20600 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG60_RS20605 PF12889 Protein of unknown function (DUF3829) RG60_RS20610 PF02634 FdhD/NarQ family RG60_RS20620 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RG60_RS20620 PF00384 Molybdopterin oxidoreductase RG60_RS20620 PF01568 Molydopterin dinucleotide binding domain RG60_RS20625 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RG60_RS20625 PF00384 Molybdopterin oxidoreductase RG60_RS20625 PF01568 Molydopterin dinucleotide binding domain RG60_RS20630 PF13247 4Fe-4S dicluster domain RG60_RS20630 PF09163 Formate dehydrogenase N, transmembrane RG60_RS20635 PF01292 Prokaryotic cytochrome b561 RG60_RS20640 PF04216 Protein involved in formate dehydrogenase formation RG60_RS20645 PF01548 Transposase RG60_RS20645 PF02371 Transposase IS116/IS110/IS902 family RG60_RS20660 PF01402 Ribbon-helix-helix protein, copG family RG60_RS20675 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system RG60_RS20680 PF07859 alpha/beta hydrolase fold RG60_RS20685 PF00583 Acetyltransferase (GNAT) family RG60_RS20685 PF09500 Putative thioesterase (yiiD_Cterm) RG60_RS20690 PF02580 D-Tyr-tRNA(Tyr) deacylase RG60_RS20695 PF03631 Virulence factor BrkB RG60_RS20700 PF13419 Haloacid dehalogenase-like hydrolase RG60_RS20710 PF07690 Major Facilitator Superfamily RG60_RS20710 PF00083 Sugar (and other) transporter RG60_RS20720 PF00107 Zinc-binding dehydrogenase RG60_RS20720 PF08240 Alcohol dehydrogenase GroES-like domain RG60_RS20725 PF01791 DeoC/LacD family aldolase RG60_RS20730 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RG60_RS20730 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RG60_RS20735 PF00294 pfkB family carbohydrate kinase RG60_RS20740 PF08220 DeoR-like helix-turn-helix domain RG60_RS20740 PF00455 DeoR C terminal sensor domain RG60_RS20745 PF07690 Major Facilitator Superfamily RG60_RS20750 PF01261 Xylose isomerase-like TIM barrel RG60_RS20755 PF00392 Bacterial regulatory proteins, gntR family RG60_RS20755 PF07702 UTRA domain RG60_RS20760 PF03144 Elongation factor Tu domain 2 RG60_RS20760 PF00679 Elongation factor G C-terminus RG60_RS20760 PF00009 Elongation factor Tu GTP binding domain RG60_RS20770 PF03951 Glutamine synthetase, beta-Grasp domain RG60_RS20770 PF00120 Glutamine synthetase, catalytic domain RG60_RS20775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS20775 PF00989 PAS fold RG60_RS20775 PF00512 His Kinase A (phospho-acceptor) domain RG60_RS20780 PF02954 Bacterial regulatory protein, Fis family RG60_RS20780 PF00158 Sigma-54 interaction domain RG60_RS20780 PF00072 Response regulator receiver domain RG60_RS20790 PF04055 Radical SAM superfamily RG60_RS20790 PF06969 HemN C-terminal domain RG60_RS20795 PF04220 Der GTPase activator (YihI) RG60_RS20805 PF01926 50S ribosome-binding GTPase RG60_RS20810 PF01612 3'-5' exonuclease RG60_RS20810 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RG60_RS20810 PF00476 DNA polymerase family A RG60_RS20810 PF01367 5'-3' exonuclease, C-terminal SAM fold RG60_RS20820 PF01553 Acyltransferase RG60_RS20825 PF06097 Bacterial protein of unknown function (DUF945) RG60_RS20830 PF01323 DSBA-like thioredoxin domain RG60_RS20835 PF01636 Phosphotransferase enzyme family RG60_RS20840 PF06288 Protein of unknown function (DUF1040) RG60_RS20845 PF12804 MobA-like NTP transferase domain RG60_RS20850 PF03205 Molybdopterin guanine dinucleotide synthesis protein B RG60_RS20880 PF12724 Flavodoxin domain RG60_RS20885 PF02386 Cation transport protein RG60_RS20890 PF01205 Uncharacterized protein family UPF0029 RG60_RS20890 PF09186 Domain of unknown function (DUF1949) RG60_RS20895 PF00557 Metallopeptidase family M24 RG60_RS20900 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RG60_RS20900 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RG60_RS20900 PF00378 Enoyl-CoA hydratase/isomerase RG60_RS20905 PF02803 Thiolase, C-terminal domain RG60_RS20905 PF00108 Thiolase, N-terminal domain RG60_RS20910 PF00970 Oxidoreductase FAD-binding domain RG60_RS20910 PF00175 Oxidoreductase NAD-binding domain RG60_RS20915 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RG60_RS20920 PF02357 Transcription termination factor nusG RG60_RS20925 PF01026 TatD related DNase RG60_RS20930 PF00902 Sec-independent protein translocase protein (TatC) RG60_RS20940 PF02416 mttA/Hcf106 family RG60_RS20945 PF03109 ABC1 family RG60_RS20950 PF02036 SCP-2 sterol transfer family RG60_RS20955 PF01209 ubiE/COQ5 methyltransferase family RG60_RS20960 PF02646 RmuC family RG60_RS20970 PF01048 Phosphorylase superfamily RG60_RS20975 PF01738 Dienelactone hydrolase family RG60_RS20980 PF01717 Cobalamin-independent synthase, Catalytic domain RG60_RS20980 PF08267 Cobalamin-independent synthase, N-terminal domain RG60_RS20985 PF03466 LysR substrate binding domain RG60_RS20985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS20990 PF00892 EamA-like transporter family RG60_RS21000 PF12146 Serine aminopeptidase, S33 RG60_RS21005 PF01810 LysE type translocator RG60_RS21010 PF01810 LysE type translocator RG60_RS21015 PF00570 HRDC domain RG60_RS21015 PF16124 RecQ zinc-binding RG60_RS21015 PF00271 Helicase conserved C-terminal domain RG60_RS21015 PF00270 DEAD/DEAH box helicase RG60_RS21015 PF09382 RQC domain RG60_RS21020 PF02253 Phospholipase A1 RG60_RS21025 PF03061 Thioesterase superfamily RG60_RS21030 PF00892 EamA-like transporter family RG60_RS21045 PF01544 CorA-like Mg2+ transporter protein RG60_RS21060 PF01544 CorA-like Mg2+ transporter protein RG60_RS21070 PF09992 Phosphodiester glycosidase RG60_RS21075 PF13361 UvrD-like helicase C-terminal domain RG60_RS21075 PF00580 UvrD/REP helicase N-terminal domain RG60_RS21080 PF13419 Haloacid dehalogenase-like hydrolase RG60_RS21085 PF00589 Phage integrase family RG60_RS21085 PF02899 Phage integrase, N-terminal SAM-like domain RG60_RS21090 PF04340 Protein of unknown function, DUF484 RG60_RS21095 PF01678 Diaminopimelate epimerase RG60_RS21100 PF13627 Prokaryotic lipoprotein-attachment site RG60_RS21110 PF01491 Frataxin-like domain RG60_RS21115 PF12633 Adenylate cyclase NT domain RG60_RS21115 PF01295 Adenylate cyclase, class-I RG60_RS21125 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RG60_RS21125 PF03900 Porphobilinogen deaminase, C-terminal domain RG60_RS21130 PF02602 Uroporphyrinogen-III synthase HemD RG60_RS21135 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase RG60_RS21140 PF07719 Tetratricopeptide repeat RG60_RS21140 PF07219 HemY protein N-terminus RG60_RS21145 PF00884 Sulfatase RG60_RS21150 PF04055 Radical SAM superfamily RG60_RS21150 PF13186 Iron-sulfur cluster-binding domain RG60_RS21175 PF00324 Amino acid permease RG60_RS21180 PF03808 Glycosyl transferase WecB/TagA/CpsF family RG60_RS21185 PF06899 WzyE protein, O-antigen assembly polymerase RG60_RS21190 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 RG60_RS21195 PF01943 Polysaccharide biosynthesis protein RG60_RS21200 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RG60_RS21210 PF00483 Nucleotidyl transferase RG60_RS21215 PF16363 GDP-mannose 4,6 dehydratase RG60_RS21220 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RG60_RS21220 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RG60_RS21220 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RG60_RS21225 PF02350 UDP-N-acetylglucosamine 2-epimerase RG60_RS21230 PF02706 Chain length determinant protein RG60_RS21235 PF00953 Glycosyl transferase family 4 RG60_RS21245 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RG60_RS21245 PF07497 Rho termination factor, RNA-binding domain RG60_RS21245 PF07498 Rho termination factor, N-terminal domain RG60_RS21255 PF00085 Thioredoxin RG60_RS21260 PF00270 DEAD/DEAH box helicase RG60_RS21260 PF00271 Helicase conserved C-terminal domain RG60_RS21270 PF02541 Ppx/GppA phosphatase family RG60_RS21275 PF13361 UvrD-like helicase C-terminal domain RG60_RS21275 PF00580 UvrD/REP helicase N-terminal domain RG60_RS21280 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RG60_RS21290 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RG60_RS21290 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RG60_RS21295 PF03466 LysR substrate binding domain RG60_RS21295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS21300 PF00585 C-terminal regulatory domain of Threonine dehydratase RG60_RS21300 PF00291 Pyridoxal-phosphate dependent enzyme RG60_RS21305 PF00920 Dehydratase family RG60_RS21310 PF01063 Amino-transferase class IV RG60_RS21320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RG60_RS21320 PF00205 Thiamine pyrophosphate enzyme, central domain RG60_RS21320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RG60_RS21325 PF08046 IlvGEDA operon leader peptide RG60_RS21330 PF13335 Magnesium chelatase, subunit ChlI C-terminal RG60_RS21330 PF01078 Magnesium chelatase, subunit ChlI RG60_RS21335 PF04219 Protein of unknown function, DUF RG60_RS21340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS21340 PF03466 LysR substrate binding domain RG60_RS21380 PF07729 FCD domain RG60_RS21380 PF00392 Bacterial regulatory proteins, gntR family RG60_RS21385 PF07690 Major Facilitator Superfamily RG60_RS21390 PF00356 Bacterial regulatory proteins, lacI family RG60_RS21395 PF00294 pfkB family carbohydrate kinase RG60_RS21400 PF13407 Periplasmic binding protein domain RG60_RS21405 PF02653 Branched-chain amino acid transport system / permease component RG60_RS21410 PF00005 ABC transporter RG60_RS21415 PF05025 RbsD / FucU transport protein family RG60_RS21420 PF02705 K+ potassium transporter RG60_RS21425 PF17868 AAA lid domain RG60_RS21425 PF07728 AAA domain (dynein-related subfamily) RG60_RS21425 PF12592 Protein of unknown function (DUF3763) RG60_RS21430 PF05762 VWA domain containing CoxE-like protein RG60_RS21435 PF03590 Aspartate-ammonia ligase RG60_RS21440 PF01037 Lrp/AsnC ligand binding domain RG60_RS21445 PF00258 Flavodoxin RG60_RS21450 PF13932 GidA associated domain RG60_RS21450 PF01134 Glucose inhibited division protein A RG60_RS21455 PF02527 rRNA small subunit methyltransferase G RG60_RS21460 PF03899 ATP synthase I chain RG60_RS21465 PF00119 ATP synthase A chain RG60_RS21470 PF00137 ATP synthase subunit C RG60_RS21475 PF00430 ATP synthase B/B' CF(0) RG60_RS21480 PF00213 ATP synthase delta (OSCP) subunit RG60_RS21485 PF02874 ATP synthase alpha/beta family, beta-barrel domain RG60_RS21485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RG60_RS21485 PF00306 ATP synthase alpha/beta chain, C terminal domain RG60_RS21490 PF00231 ATP synthase RG60_RS21495 PF02874 ATP synthase alpha/beta family, beta-barrel domain RG60_RS21495 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RG60_RS21500 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain RG60_RS21500 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RG60_RS21510 PF14602 Hexapeptide repeat of succinyl-transferase RG60_RS21510 PF12804 MobA-like NTP transferase domain RG60_RS21510 PF00132 Bacterial transferase hexapeptide (six repeats) RG60_RS21515 PF01380 SIS domain RG60_RS21520 PF00419 Fimbrial protein RG60_RS21525 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG60_RS21525 PF02753 Pili assembly chaperone PapD, C-terminal domain RG60_RS21530 PF13954 PapC N-terminal domain RG60_RS21530 PF00577 Outer membrane usher protein RG60_RS21530 PF13953 PapC C-terminal domain RG60_RS21540 PF12849 PBP superfamily domain RG60_RS21545 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS21550 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS21555 PF00005 ABC transporter RG60_RS21560 PF01895 PhoU domain RG60_RS21565 PF00874 PRD domain RG60_RS21565 PF03123 CAT RNA binding domain RG60_RS21570 PF02378 Phosphotransferase system, EIIC RG60_RS21570 PF00367 phosphotransferase system, EIIB RG60_RS21570 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RG60_RS21575 PF00232 Glycosyl hydrolase family 1 RG60_RS21580 PF11471 Maltoporin periplasmic N-terminal extension RG60_RS21580 PF02264 LamB porin RG60_RS21585 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RG60_RS21585 PF00756 Putative esterase RG60_RS21590 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RG60_RS21595 PF03691 Uncharacterised protein family (UPF0167) RG60_RS21605 PF13419 Haloacid dehalogenase-like hydrolase RG60_RS21610 PF00860 Permease family RG60_RS21615 PF03358 NADPH-dependent FMN reductase RG60_RS21625 PF03466 LysR substrate binding domain RG60_RS21625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS21630 PF07690 Major Facilitator Superfamily RG60_RS21635 PF03222 Tryptophan/tyrosine permease family RG60_RS21640 PF01212 Beta-eliminating lyase RG60_RS21645 PF08053 Tryptophanase operon leader peptide RG60_RS21650 PF01926 50S ribosome-binding GTPase RG60_RS21650 PF12631 MnmE helical domain RG60_RS21650 PF10396 GTP-binding protein TrmE N-terminus RG60_RS21655 PF02096 60Kd inner membrane protein RG60_RS21655 PF14849 YidC periplasmic domain RG60_RS21660 PF01809 Putative membrane protein insertion efficiency factor RG60_RS21665 PF00825 Ribonuclease P RG60_RS21670 PF00468 Ribosomal protein L34 RG60_RS21680 PF00308 Bacterial dnaA protein RG60_RS21680 PF11638 DnaA N-terminal domain RG60_RS21680 PF08299 Bacterial dnaA protein helix-turn-helix RG60_RS21685 PF00712 DNA polymerase III beta subunit, N-terminal domain RG60_RS21685 PF02767 DNA polymerase III beta subunit, central domain RG60_RS21685 PF02768 DNA polymerase III beta subunit, C-terminal domain RG60_RS21690 PF02463 RecF/RecN/SMC N terminal domain RG60_RS21695 PF00204 DNA gyrase B RG60_RS21695 PF00986 DNA gyrase B subunit, carboxyl terminus RG60_RS21695 PF18053 DNA gyrase B subunit insert domain RG60_RS21695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS21695 PF01751 Toprim domain RG60_RS21700 PF06078 Bacterial protein of unknown function (DUF937) RG60_RS21715 PF00392 Bacterial regulatory proteins, gntR family RG60_RS21715 PF07729 FCD domain RG60_RS21720 PF05035 2-keto-3-deoxy-galactonokinase RG60_RS21725 PF01081 KDPG and KHG aldolase RG60_RS21730 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RG60_RS21730 PF13378 Enolase C-terminal domain-like RG60_RS21735 PF07690 Major Facilitator Superfamily RG60_RS21740 PF01494 FAD binding domain RG60_RS21745 PF12566 Protein of unknown function (DUF3748) RG60_RS21745 PF07676 WD40-like Beta Propeller Repeat RG60_RS21750 PF07119 Protein of unknown function (DUF1375) RG60_RS21755 PF00011 Hsp20/alpha crystallin family RG60_RS21760 PF00011 Hsp20/alpha crystallin family RG60_RS21765 PF02080 TrkA-C domain RG60_RS21765 PF06826 Predicted Permease Membrane Region RG60_RS21770 PF00392 Bacterial regulatory proteins, gntR family RG60_RS21770 PF07702 UTRA domain RG60_RS21775 PF02378 Phosphotransferase system, EIIC RG60_RS21775 PF00367 phosphotransferase system, EIIB RG60_RS21780 PF02056 Family 4 glycosyl hydrolase RG60_RS21790 PF02311 AraC-like ligand binding domain RG60_RS21790 PF12833 Helix-turn-helix domain RG60_RS21795 PF00474 Sodium:solute symporter family RG60_RS21800 PF16347 Domain of unknown function (DUF4976) RG60_RS21800 PF00884 Sulfatase RG60_RS21810 PF02656 Domain of unknown function (DUF202) RG60_RS21815 PF02656 Domain of unknown function (DUF202) RG60_RS21835 PF13939 Toxin TisB, type I toxin-antitoxin system RG60_RS21855 PF08049 IlvB leader peptide RG60_RS21860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RG60_RS21860 PF00205 Thiamine pyrophosphate enzyme, central domain RG60_RS21860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RG60_RS21865 PF01842 ACT domain RG60_RS21870 PF00196 Bacterial regulatory proteins, luxR family RG60_RS21870 PF00072 Response regulator receiver domain RG60_RS21875 PF07730 Histidine kinase RG60_RS21875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS21875 PF05231 MASE1 RG60_RS21880 PF07690 Major Facilitator Superfamily RG60_RS21885 PF07690 Major Facilitator Superfamily RG60_RS21890 PF13382 Adenine deaminase C-terminal domain RG60_RS21890 PF01979 Amidohydrolase family RG60_RS21895 PF00860 Permease family RG60_RS21900 PF06711 Protein of unknown function (DUF1198) RG60_RS21910 PF07690 Major Facilitator Superfamily RG60_RS21930 PF03180 NLPA lipoprotein RG60_RS21940 PF07690 Major Facilitator Superfamily RG60_RS21960 PF06755 CbtA_toxin of type IV toxin-antitoxin system RG60_RS21965 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A RG60_RS21970 PF06174 Protein of unknown function (DUF987) RG60_RS21975 PF04002 RadC-like JAB domain RG60_RS21980 PF03230 Antirestriction protein RG60_RS21990 PF06067 Domain of unknown function (DUF932) RG60_RS21995 PF13018 Extended Signal Peptide of Type V secretion system RG60_RS21995 PF16168 Adhesin of bacterial autotransporter system, probable stalk RG60_RS21995 PF03797 Autotransporter beta-domain RG60_RS22010 PF01695 IstB-like ATP binding protein RG60_RS22025 PF05717 IS66 Orf2 like protein RG60_RS22035 PF13005 zinc-finger binding domain of transposase IS66 RG60_RS22035 PF13007 Transposase C of IS166 homeodomain RG60_RS22035 PF03050 Transposase IS66 family RG60_RS22035 PF13817 IS66 C-terminal element RG60_RS22070 PF00665 Integrase core domain RG60_RS22075 PF01527 Transposase RG60_RS22080 PF05321 Haemolysin expression modulating protein RG60_RS22125 PF08479 POTRA domain, ShlB-type RG60_RS22125 PF17287 POTRA domain RG60_RS22125 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RG60_RS22130 PF13332 Hemagglutinin repeat RG60_RS22130 PF05860 haemagglutination activity domain RG60_RS22130 PF04829 Pre-toxin domain with VENN motif RG60_RS22145 PF13817 IS66 C-terminal element RG60_RS22145 PF13005 zinc-finger binding domain of transposase IS66 RG60_RS22145 PF03050 Transposase IS66 family RG60_RS22145 PF13007 Transposase C of IS166 homeodomain RG60_RS22150 PF05717 IS66 Orf2 like protein RG60_RS22165 PF00665 Integrase core domain RG60_RS22165 PF13333 Integrase core domain RG60_RS22165 PF13276 HTH-like domain RG60_RS22170 PF03797 Autotransporter beta-domain RG60_RS22175 PF03605 Anaerobic c4-dicarboxylate membrane transporter RG60_RS22180 PF01177 Asp/Glu/Hydantoin racemase RG60_RS22185 PF03466 LysR substrate binding domain RG60_RS22185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS22200 PF00665 Integrase core domain RG60_RS22200 PF13333 Integrase core domain RG60_RS22200 PF13276 HTH-like domain RG60_RS22205 PF01527 Transposase RG60_RS22260 PF01695 IstB-like ATP binding protein RG60_RS22265 PF00665 Integrase core domain RG60_RS22265 PF02796 Helix-turn-helix domain of resolvase RG60_RS22270 PF13005 zinc-finger binding domain of transposase IS66 RG60_RS22270 PF13817 IS66 C-terminal element RG60_RS22270 PF03050 Transposase IS66 family RG60_RS22270 PF13007 Transposase C of IS166 homeodomain RG60_RS22275 PF05717 IS66 Orf2 like protein RG60_RS22290 PF05662 Coiled stalk of trimeric autotransporter adhesin RG60_RS22290 PF03895 YadA-like membrane anchor domain RG60_RS22290 PF05658 Head domain of trimeric autotransporter adhesin RG60_RS22315 PF03797 Autotransporter beta-domain RG60_RS22330 PF12833 Helix-turn-helix domain RG60_RS22335 PF00196 Bacterial regulatory proteins, luxR family RG60_RS22335 PF00563 EAL domain RG60_RS22345 PF14163 Super-infection exclusion protein B RG60_RS22355 PF13333 Integrase core domain RG60_RS22355 PF13276 HTH-like domain RG60_RS22355 PF00665 Integrase core domain RG60_RS22360 PF12833 Helix-turn-helix domain RG60_RS22365 PF03811 InsA N-terminal domain RG60_RS22365 PF12759 InsA C-terminal domain RG60_RS22370 PF03811 InsA N-terminal domain RG60_RS22370 PF12759 InsA C-terminal domain RG60_RS22380 PF00589 Phage integrase family RG60_RS22380 PF13356 Arm DNA-binding domain RG60_RS22385 PF13356 Arm DNA-binding domain RG60_RS22385 PF14659 Phage integrase, N-terminal SAM-like domain RG60_RS22385 PF00589 Phage integrase family RG60_RS22400 PF13802 Galactose mutarotase-like RG60_RS22400 PF01055 Glycosyl hydrolases family 31 RG60_RS22405 PF05170 AsmA family RG60_RS22410 PF00860 Permease family RG60_RS22415 PF03616 Sodium/glutamate symporter RG60_RS22425 PF17191 RecG wedge domain RG60_RS22425 PF00271 Helicase conserved C-terminal domain RG60_RS22425 PF00270 DEAD/DEAH box helicase RG60_RS22430 PF12105 SpoU, rRNA methylase, C-terminal RG60_RS22430 PF00588 SpoU rRNA Methylase family RG60_RS22435 PF02824 TGS domain RG60_RS22435 PF04607 Region found in RelA / SpoT proteins RG60_RS22435 PF13291 ACT domain RG60_RS22440 PF01192 RNA polymerase Rpb6 RG60_RS22445 PF00625 Guanylate kinase RG60_RS22450 PF01653 NAD-dependent DNA ligase adenylation domain RG60_RS22450 PF03120 NAD-dependent DNA ligase OB-fold domain RG60_RS22455 PF03458 UPF0126 domain RG60_RS22465 PF08340 Domain of unknown function (DUF1732) RG60_RS22465 PF03755 YicC-like family, N-terminal region RG60_RS22475 PF03725 3' exoribonuclease family, domain 2 RG60_RS22475 PF01138 3' exoribonuclease family, domain 1 RG60_RS22480 PF00156 Phosphoribosyl transferase domain RG60_RS22485 PF00440 Bacterial regulatory proteins, tetR family RG60_RS22490 PF00692 dUTPase RG60_RS22495 PF02441 Flavoprotein RG60_RS22495 PF04127 DNA / pantothenate metabolism flavoprotein RG60_RS22500 PF04002 RadC-like JAB domain RG60_RS22505 PF00830 Ribosomal L28 family RG60_RS22510 PF00471 Ribosomal protein L33 RG60_RS22515 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RG60_RS22515 PF06827 Zinc finger found in FPG and IleRS RG60_RS22515 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RG60_RS22520 PF01467 Cytidylyltransferase-like RG60_RS22525 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RG60_RS22530 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RG60_RS22535 PF00534 Glycosyl transferases group 1 RG60_RS22535 PF13439 Glycosyltransferase Family 4 RG60_RS22545 PF01501 Glycosyl transferase family 8 RG60_RS22545 PF08437 Glycosyl transferase family 8 C-terminal RG60_RS22550 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) RG60_RS22555 PF01501 Glycosyl transferase family 8 RG60_RS22555 PF08437 Glycosyl transferase family 8 C-terminal RG60_RS22560 PF00534 Glycosyl transferases group 1 RG60_RS22565 PF04932 O-Antigen ligase RG60_RS22570 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RG60_RS22575 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RG60_RS22580 PF01370 NAD dependent epimerase/dehydratase family RG60_RS22585 PF09612 Bacterial protein of unknown function (HtrL_YibB) RG60_RS22590 PF00155 Aminotransferase class I and II RG60_RS22595 PF08240 Alcohol dehydrogenase GroES-like domain RG60_RS22595 PF00107 Zinc-binding dehydrogenase RG60_RS22600 PF00535 Glycosyl transferase family 2 RG60_RS22605 PF04748 Divergent polysaccharide deacetylase RG60_RS22610 PF01551 Peptidase family M23 RG60_RS22615 PF01676 Metalloenzyme superfamily RG60_RS22615 PF06415 BPG-independent PGAM N-terminus (iPGM_N) RG60_RS22625 PF00581 Rhodanese-like domain RG60_RS22630 PF00462 Glutaredoxin RG60_RS22635 PF02556 Preprotein translocase subunit SecB RG60_RS22640 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RG60_RS22640 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RG60_RS22645 PF00132 Bacterial transferase hexapeptide (six repeats) RG60_RS22645 PF06426 Serine acetyltransferase, N-terminal RG60_RS22650 PF00588 SpoU rRNA Methylase family RG60_RS22655 PF01070 FMN-dependent dehydrogenase RG60_RS22660 PF00392 Bacterial regulatory proteins, gntR family RG60_RS22660 PF07729 FCD domain RG60_RS22665 PF02652 L-lactate permease RG60_RS22680 PF11622 Protein of unknown function (DUF3251) RG60_RS22690 PF10928 Protein of unknown function (DUF2810) RG60_RS22700 PF05068 Mannitol repressor RG60_RS22705 PF01232 Mannitol dehydrogenase Rossmann domain RG60_RS22705 PF08125 Mannitol dehydrogenase C-terminal domain RG60_RS22710 PF02378 Phosphotransferase system, EIIC RG60_RS22710 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG60_RS22710 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RG60_RS22715 PF11742 Protein of unknown function (DUF3302) RG60_RS22720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG60_RS22720 PF00529 HlyD membrane-fusion protein of T1SS RG60_RS22725 PF15596 Immunity protein 57 RG60_RS22750 PF03527 RHS protein RG60_RS22755 PF03130 PBS lyase HEAT-like repeat RG60_RS22760 PF15631 NTF2 fold immunity protein RG60_RS22765 PF14220 Domain of unknown function (DUF4329) RG60_RS22765 PF03527 RHS protein RG60_RS22765 PF05593 RHS Repeat RG60_RS22770 PF00043 Glutathione S-transferase, C-terminal domain RG60_RS22770 PF13417 Glutathione S-transferase, N-terminal domain RG60_RS22775 PF03841 L-seryl-tRNA selenium transferase RG60_RS22775 PF12390 Selenocysteine synthase N terminal RG60_RS22780 PF00009 Elongation factor Tu GTP binding domain RG60_RS22780 PF09107 Elongation factor SelB, winged helix RG60_RS22780 PF03144 Elongation factor Tu domain 2 RG60_RS22780 PF09106 Elongation factor SelB, winged helix RG60_RS22785 PF00465 Iron-containing alcohol dehydrogenase RG60_RS22790 PF00171 Aldehyde dehydrogenase family RG60_RS22800 PF11742 Protein of unknown function (DUF3302) RG60_RS22805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG60_RS22805 PF00529 HlyD membrane-fusion protein of T1SS RG60_RS22810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS22810 PF03466 LysR substrate binding domain RG60_RS22815 PF06629 MltA-interacting protein MipA RG60_RS22820 PF07944 Beta-L-arabinofuranosidase, GH127 RG60_RS22835 PF00596 Class II Aldolase and Adducin N-terminal domain RG60_RS22840 PF01261 Xylose isomerase-like TIM barrel RG60_RS22845 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RG60_RS22850 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RG60_RS22850 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG60_RS22855 PF03480 Bacterial extracellular solute-binding protein, family 7 RG60_RS22860 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RG60_RS22865 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RG60_RS22870 PF04074 YhcH/YjgK/YiaL RG60_RS22875 PF02615 Malate/L-lactate dehydrogenase RG60_RS22880 PF01614 Bacterial transcriptional regulator RG60_RS22880 PF09339 IclR helix-turn-helix domain RG60_RS22885 PF13247 4Fe-4S dicluster domain RG60_RS22890 PF00155 Aminotransferase class I and II RG60_RS22895 PF00128 Alpha amylase, catalytic domain RG60_RS22900 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RG60_RS22905 PF12833 Helix-turn-helix domain RG60_RS22910 PF02653 Branched-chain amino acid transport system / permease component RG60_RS22915 PF00005 ABC transporter RG60_RS22920 PF13407 Periplasmic binding protein domain RG60_RS22930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RG60_RS22930 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RG60_RS22935 PF05360 yiaA/B two helix domain RG60_RS22940 PF05360 yiaA/B two helix domain RG60_RS22945 PF01757 Acyltransferase family RG60_RS22950 PF13983 YsaB-like lipoprotein RG60_RS22955 PF02091 Glycyl-tRNA synthetase alpha subunit RG60_RS22960 PF02092 Glycyl-tRNA synthetase beta subunit RG60_RS22960 PF05746 DALR anticodon binding domain RG60_RS22965 PF01848 Hok/gef family RG60_RS22970 PF00313 'Cold-shock' DNA-binding domain RG60_RS22975 PF01381 Helix-turn-helix RG60_RS22980 PF11254 Protein of unknown function (DUF3053) RG60_RS22985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RG60_RS22985 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RG60_RS22990 PF13488 Glycine zipper RG60_RS22990 PF00691 OmpA family RG60_RS22995 PF01568 Molydopterin dinucleotide binding domain RG60_RS22995 PF18364 Molybdopterin oxidoreductase N-terminal domain RG60_RS22995 PF00384 Molybdopterin oxidoreductase RG60_RS23000 PF00583 Acetyltransferase (GNAT) family RG60_RS23005 PF03352 Methyladenine glycosylase RG60_RS23010 PF03797 Autotransporter beta-domain RG60_RS23020 PF07690 Major Facilitator Superfamily RG60_RS23025 PF00419 Fimbrial protein RG60_RS23030 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG60_RS23030 PF02753 Pili assembly chaperone PapD, C-terminal domain RG60_RS23035 PF13953 PapC C-terminal domain RG60_RS23035 PF13954 PapC N-terminal domain RG60_RS23035 PF00577 Outer membrane usher protein RG60_RS23040 PF00419 Fimbrial protein RG60_RS23045 PF00419 Fimbrial protein RG60_RS23050 PF00884 Sulfatase RG60_RS23050 PF08019 Phosphoethanolamine transferase EptA/EptB RG60_RS23070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG60_RS23080 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS23085 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS23085 PF12911 N-terminal TM domain of oligopeptide transport permease C RG60_RS23090 PF00005 ABC transporter RG60_RS23090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG60_RS23095 PF00005 ABC transporter RG60_RS23095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RG60_RS23100 PF03222 Tryptophan/tyrosine permease family RG60_RS23110 PF13940 Toxin Ldr, type I toxin-antitoxin system RG60_RS23120 PF13940 Toxin Ldr, type I toxin-antitoxin system RG60_RS23130 PF13940 Toxin Ldr, type I toxin-antitoxin system RG60_RS23135 PF11658 Cellulose biosynthesis protein BcsG RG60_RS23140 PF11120 Cellulose biosynthesis protein BcsF RG60_RS23145 PF10995 Cellulose biosynthesis GIL RG60_RS23150 PF10945 Cellulose biosynthesis protein BcsR RG60_RS23155 PF06564 Cellulose biosynthesis protein BcsQ RG60_RS23160 PF03552 Cellulose synthase RG60_RS23160 PF00535 Glycosyl transferase family 2 RG60_RS23160 PF07238 PilZ domain RG60_RS23165 PF03170 Bacterial cellulose synthase subunit RG60_RS23170 PF01270 Glycosyl hydrolases family 8 RG60_RS23175 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) RG60_RS23180 PF00990 Diguanylate cyclase, GGDEF domain RG60_RS23180 PF17154 Gammaproteobacterial periplasmic sensor domain RG60_RS23180 PF00563 EAL domain RG60_RS23180 PF00672 HAMP domain RG60_RS23190 PF00375 Sodium:dicarboxylate symporter family RG60_RS23200 PF05193 Peptidase M16 inactive domain RG60_RS23200 PF00675 Insulinase (Peptidase family M16) RG60_RS23205 PF00294 pfkB family carbohydrate kinase RG60_RS23215 PF00563 EAL domain RG60_RS23220 PF05170 AsmA family RG60_RS23225 PF00083 Sugar (and other) transporter RG60_RS23225 PF07690 Major Facilitator Superfamily RG60_RS23230 PF03631 Virulence factor BrkB RG60_RS23235 PF03466 LysR substrate binding domain RG60_RS23235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS23240 PF00196 Bacterial regulatory proteins, luxR family RG60_RS23245 PF01204 Trehalase RG60_RS23250 PF03150 Di-haem cytochrome c peroxidase RG60_RS23250 PF00034 Cytochrome c RG60_RS23250 PF14376 Haem-binding domain RG60_RS23255 PF00282 Pyridoxal-dependent decarboxylase conserved domain RG60_RS23260 PF12833 Helix-turn-helix domain RG60_RS23265 PF12833 Helix-turn-helix domain RG60_RS23275 PF00873 AcrB/AcrD/AcrF family RG60_RS23280 PF00529 HlyD membrane-fusion protein of T1SS RG60_RS23280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG60_RS23290 PF00196 Bacterial regulatory proteins, luxR family RG60_RS23295 PF03729 Short repeat of unknown function (DUF308) RG60_RS23300 PF06411 HdeA/HdeB family RG60_RS23305 PF06411 HdeA/HdeB family RG60_RS23310 PF02308 MgtC family RG60_RS23315 PF00196 Bacterial regulatory proteins, luxR family RG60_RS23325 PF03843 Outer membrane lipoprotein Slp family RG60_RS23345 PF03960 ArsC family RG60_RS23350 PF02040 Arsenical pump membrane protein RG60_RS23355 PF01022 Bacterial regulatory protein, arsR family RG60_RS23370 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG60_RS23370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RG60_RS23375 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ RG60_RS23380 PF01432 Peptidase family M3 RG60_RS23385 PF04445 Putative SAM-dependent methyltransferase RG60_RS23390 PF00854 POT family RG60_RS23400 PF00582 Universal stress protein family RG60_RS23405 PF10625 Universal stress protein B (UspB) RG60_RS23410 PF01384 Phosphate transporter family RG60_RS23420 PF10951 Protein of unknown function (DUF2776) RG60_RS23435 PF13258 Domain of unknown function (DUF4049) RG60_RS23440 PF13258 Domain of unknown function (DUF4049) RG60_RS23445 PF13533 Biotin-lipoyl like RG60_RS23450 PF00005 ABC transporter RG60_RS23470 PF08753 NikR C terminal nickel binding domain RG60_RS23470 PF01402 Ribbon-helix-helix protein, copG family RG60_RS23475 PF00005 ABC transporter RG60_RS23480 PF00005 ABC transporter RG60_RS23485 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS23490 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS23495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RG60_RS23500 PF01648 4'-phosphopantetheinyl transferase superfamily RG60_RS23505 PF01594 AI-2E family transporter RG60_RS23510 PF07690 Major Facilitator Superfamily RG60_RS23515 PF08786 DcrB RG60_RS23520 PF02592 Putative vitamin uptake transporter RG60_RS23525 PF01206 Sulfurtransferase TusA RG60_RS23530 PF00403 Heavy-metal-associated domain RG60_RS23535 PF07947 YhhN family RG60_RS23540 PF10694 Protein of unknown function (DUF2500) RG60_RS23545 PF06611 Protein of unknown function (DUF1145) RG60_RS23555 PF02881 SRP54-type protein, helical bundle domain RG60_RS23555 PF00448 SRP54-type protein, GTPase domain RG60_RS23560 PF00005 ABC transporter RG60_RS23565 PF02687 FtsX-like permease family RG60_RS23565 PF18075 FtsX extracellular domain RG60_RS23570 PF04542 Sigma-70 region 2 RG60_RS23570 PF04545 Sigma-70, region 4 RG60_RS23575 PF13458 Periplasmic binding protein RG60_RS23580 PF12568 Acetyltransferase (GNAT) domain, PanZ RG60_RS23590 PF13458 Periplasmic binding protein RG60_RS23595 PF02653 Branched-chain amino acid transport system / permease component RG60_RS23600 PF02653 Branched-chain amino acid transport system / permease component RG60_RS23600 PF11862 Domain of unknown function (DUF3382) RG60_RS23605 PF00005 ABC transporter RG60_RS23605 PF12399 Branched-chain amino acid ATP-binding cassette transporter RG60_RS23610 PF00005 ABC transporter RG60_RS23620 PF13416 Bacterial extracellular solute-binding protein RG60_RS23625 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS23630 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS23635 PF17912 MalK OB fold domain RG60_RS23635 PF00005 ABC transporter RG60_RS23640 PF03009 Glycerophosphoryl diester phosphodiesterase family RG60_RS23645 PF10956 Protein of unknown function (DUF2756) RG60_RS23655 PF15567 Immunity protein 35 RG60_RS23660 PF13276 HTH-like domain RG60_RS23660 PF00665 Integrase core domain RG60_RS23660 PF13333 Integrase core domain RG60_RS23665 PF01527 Transposase RG60_RS23680 PF05638 Type VI secretion system effector, Hcp RG60_RS23685 PF00583 Acetyltransferase (GNAT) family RG60_RS23690 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RG60_RS23690 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RG60_RS23695 PF02678 Pirin RG60_RS23695 PF17954 Quercetinase C-terminal cupin domain RG60_RS23700 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RG60_RS23700 PF00356 Bacterial regulatory proteins, lacI family RG60_RS23705 PF01202 Shikimate kinase RG60_RS23710 PF02447 GntP family permease RG60_RS23715 PF01914 MarC family integral membrane protein RG60_RS23720 PF02774 Semialdehyde dehydrogenase, dimerisation domain RG60_RS23720 PF01118 Semialdehyde dehydrogenase, NAD binding domain RG60_RS23725 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RG60_RS23725 PF00128 Alpha amylase, catalytic domain RG60_RS23725 PF02806 Alpha amylase, C-terminal all-beta domain RG60_RS23730 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RG60_RS23730 PF00128 Alpha amylase, catalytic domain RG60_RS23730 PF18390 Glycogen debranching enzyme C-terminal domain RG60_RS23735 PF00483 Nucleotidyl transferase RG60_RS23740 PF00534 Glycosyl transferases group 1 RG60_RS23740 PF08323 Starch synthase catalytic domain RG60_RS23745 PF00343 Carbohydrate phosphorylase RG60_RS23770 PF16901 C-terminal domain of alpha-glycerophosphate oxidase RG60_RS23770 PF01266 FAD dependent oxidoreductase RG60_RS23775 PF00581 Rhodanese-like domain RG60_RS23780 PF01694 Rhomboid family RG60_RS23780 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease RG60_RS23785 PF00455 DeoR C terminal sensor domain RG60_RS23785 PF08220 DeoR-like helix-turn-helix domain RG60_RS23790 PF06956 Regulator of RNA terminal phosphate cyclase RG60_RS23790 PF00158 Sigma-54 interaction domain RG60_RS23795 PF01139 tRNA-splicing ligase RtcB RG60_RS23800 PF01137 RNA 3'-terminal phosphate cyclase RG60_RS23800 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain RG60_RS23805 PF17874 MalT-like TPR region RG60_RS23805 PF00196 Bacterial regulatory proteins, luxR family RG60_RS23810 PF00343 Carbohydrate phosphorylase RG60_RS23815 PF02446 4-alpha-glucanotransferase RG60_RS23820 PF02447 GntP family permease RG60_RS23825 PF01106 NifU-like domain RG60_RS23825 PF01521 Iron-sulphur cluster biosynthesis RG60_RS23830 PF00156 Phosphoribosyl transferase domain RG60_RS23835 PF00561 alpha/beta hydrolase fold RG60_RS23850 PF09012 FeoC like transcriptional regulator RG60_RS23855 PF02421 Ferrous iron transport protein B RG60_RS23855 PF17910 FeoB cytosolic helical domain RG60_RS23855 PF07664 Ferrous iron transport protein B C terminus RG60_RS23855 PF07670 Nucleoside recognition RG60_RS23860 PF04023 FeoA domain RG60_RS23870 PF17674 HHH domain RG60_RS23870 PF00575 S1 RNA binding domain RG60_RS23870 PF16921 Tex protein YqgF-like domain RG60_RS23870 PF09371 Tex-like protein N-terminal domain RG60_RS23875 PF01272 Transcription elongation factor, GreA/GreB, C-term RG60_RS23875 PF03449 Transcription elongation factor, N-terminal RG60_RS23885 PF00072 Response regulator receiver domain RG60_RS23885 PF00486 Transcriptional regulatory protein, C terminal RG60_RS23890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS23890 PF00672 HAMP domain RG60_RS23890 PF00512 His Kinase A (phospho-acceptor) domain RG60_RS23895 PF01293 Phosphoenolpyruvate carboxykinase RG60_RS23905 PF13687 Domain of unknown function (DUF4153) RG60_RS23910 PF01430 Hsp33 protein RG60_RS23915 PF01479 S4 domain RG60_RS23920 PF13419 Haloacid dehalogenase-like hydrolase RG60_RS23925 PF07095 Intracellular growth attenuator protein IgaA RG60_RS23930 PF00293 NUDIX domain RG60_RS23935 PF17092 Penicillin-binding protein OB-like domain RG60_RS23935 PF00912 Transglycosylase RG60_RS23935 PF00905 Penicillin binding protein transpeptidase domain RG60_RS23945 PF05137 Fimbrial assembly protein (PilN) RG60_RS23955 PF10748 DNA utilization proteins HofP RG60_RS23960 PF03958 Bacterial type II/III secretion system short domain RG60_RS23960 PF00263 Bacterial type II and III secretion system protein RG60_RS23970 PF01202 Shikimate kinase RG60_RS23975 PF01761 3-dehydroquinate synthase RG60_RS23980 PF05036 Sporulation related domain RG60_RS23985 PF02086 D12 class N6 adenine-specific DNA methyltransferase RG60_RS23990 PF00834 Ribulose-phosphate 3 epimerase family RG60_RS23995 PF13419 Haloacid dehalogenase-like hydrolase RG60_RS24000 PF00579 tRNA synthetases class I (W and Y) RG60_RS24005 PF14503 YhfZ C-terminal domain RG60_RS24005 PF14502 Helix-turn-helix domain RG60_RS24015 PF01168 Alanine racemase, N-terminal domain RG60_RS24020 PF01676 Metalloenzyme superfamily RG60_RS24025 PF02126 Phosphotriesterase family RG60_RS24030 PF10941 Protein of unknown function DUF2620 RG60_RS24035 PF10797 Protein of unknown function RG60_RS24040 PF00155 Aminotransferase class I and II RG60_RS24045 PF07702 UTRA domain RG60_RS24045 PF00392 Bacterial regulatory proteins, gntR family RG60_RS24050 PF00294 pfkB family carbohydrate kinase RG60_RS24055 PF01261 Xylose isomerase-like TIM barrel RG60_RS24060 PF01261 Xylose isomerase-like TIM barrel RG60_RS24065 PF01380 SIS domain RG60_RS24070 PF13520 Amino acid permease RG60_RS24075 PF13978 Protein of unknown function (DUF4223) RG60_RS24080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RG60_RS24080 PF10414 Sirohaem synthase dimerisation region RG60_RS24080 PF14824 Sirohaem biosynthesis protein central RG60_RS24085 PF01226 Formate/nitrite transporter RG60_RS24090 PF13806 Rieske-like [2Fe-2S] domain RG60_RS24095 PF04324 BFD-like [2Fe-2S] binding domain RG60_RS24095 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RG60_RS24095 PF18267 Rubredoxin NAD+ reductase C-terminal domain RG60_RS24095 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG60_RS24095 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RG60_RS24100 PF07690 Major Facilitator Superfamily RG60_RS24105 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RG60_RS24110 PF10832 Protein of unknown function (DUF2559) RG60_RS24115 PF02661 Fic/DOC family RG60_RS24120 PF00117 Glutamine amidotransferase class-I RG60_RS24125 PF00202 Aminotransferase class-III RG60_RS24130 PF12805 FUSC-like inner membrane protein yccS RG60_RS24135 PF00027 Cyclic nucleotide-binding domain RG60_RS24135 PF13545 Crp-like helix-turn-helix domain RG60_RS24145 PF02566 OsmC-like protein RG60_RS24150 PF00485 Phosphoribulokinase / Uridine kinase family RG60_RS24155 PF06794 Uncharacterised protein family (UPF0270) RG60_RS24160 PF00561 alpha/beta hydrolase fold RG60_RS24165 PF12848 ABC transporter RG60_RS24165 PF00005 ABC transporter RG60_RS24175 PF02525 Flavodoxin-like fold RG60_RS24180 PF00999 Sodium/hydrogen exchanger family RG60_RS24180 PF02254 TrkA-N domain RG60_RS24185 PF09526 Probable metal-binding protein (DUF2387) RG60_RS24190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RG60_RS24195 PF04102 SlyX RG60_RS24200 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase RG60_RS24200 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RG60_RS24205 PF08348 YheO-like PAS domain RG60_RS24205 PF13309 HTH domain RG60_RS24210 PF02635 DsrE/DsrF-like family RG60_RS24215 PF02635 DsrE/DsrF-like family RG60_RS24220 PF04077 DsrH like protein RG60_RS24225 PF00164 Ribosomal protein S12/S23 RG60_RS24230 PF00177 Ribosomal protein S7p/S5e RG60_RS24235 PF00009 Elongation factor Tu GTP binding domain RG60_RS24235 PF03764 Elongation factor G, domain IV RG60_RS24235 PF14492 Elongation Factor G, domain II RG60_RS24235 PF00679 Elongation factor G C-terminus RG60_RS24235 PF03144 Elongation factor Tu domain 2 RG60_RS24240 PF03143 Elongation factor Tu C-terminal domain RG60_RS24240 PF03144 Elongation factor Tu domain 2 RG60_RS24240 PF00009 Elongation factor Tu GTP binding domain RG60_RS24250 PF04324 BFD-like [2Fe-2S] binding domain RG60_RS24255 PF00210 Ferritin-like domain RG60_RS24260 PF01478 Type IV leader peptidase family RG60_RS24270 PF00338 Ribosomal protein S10p/S20e RG60_RS24275 PF00297 Ribosomal protein L3 RG60_RS24280 PF00573 Ribosomal protein L4/L1 family RG60_RS24285 PF00276 Ribosomal protein L23 RG60_RS24290 PF03947 Ribosomal Proteins L2, C-terminal domain RG60_RS24290 PF00181 Ribosomal Proteins L2, RNA binding domain RG60_RS24295 PF00203 Ribosomal protein S19 RG60_RS24300 PF00237 Ribosomal protein L22p/L17e RG60_RS24305 PF00189 Ribosomal protein S3, C-terminal domain RG60_RS24305 PF07650 KH domain RG60_RS24310 PF00252 Ribosomal protein L16p/L10e RG60_RS24315 PF00831 Ribosomal L29 protein RG60_RS24320 PF00366 Ribosomal protein S17 RG60_RS24325 PF00238 Ribosomal protein L14p/L23e RG60_RS24330 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 RG60_RS24330 PF00467 KOW motif RG60_RS24335 PF00673 ribosomal L5P family C-terminus RG60_RS24335 PF00281 Ribosomal protein L5 RG60_RS24340 PF00253 Ribosomal protein S14p/S29e RG60_RS24345 PF00410 Ribosomal protein S8 RG60_RS24350 PF00347 Ribosomal protein L6 RG60_RS24355 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast RG60_RS24360 PF03719 Ribosomal protein S5, C-terminal domain RG60_RS24360 PF00333 Ribosomal protein S5, N-terminal domain RG60_RS24365 PF00327 Ribosomal protein L30p/L7e RG60_RS24370 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RG60_RS24375 PF00344 SecY translocase RG60_RS24380 PF00444 Ribosomal protein L36 RG60_RS24385 PF00416 Ribosomal protein S13/S18 RG60_RS24390 PF00411 Ribosomal protein S11 RG60_RS24395 PF00163 Ribosomal protein S4/S9 N-terminal domain RG60_RS24395 PF01479 S4 domain RG60_RS24400 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RG60_RS24400 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RG60_RS24400 PF01000 RNA polymerase Rpb3/RpoA insert domain RG60_RS24405 PF01196 Ribosomal protein L17 RG60_RS24410 PF09350 Domain of unknown function (DUF1992) RG60_RS24415 PF13411 MerR HTH family regulatory protein RG60_RS24420 PF03889 Alternative ribosome-rescue factor A RG60_RS24425 PF01741 Large-conductance mechanosensitive channel, MscL RG60_RS24430 PF02254 TrkA-N domain RG60_RS24430 PF02080 TrkA-C domain RG60_RS24435 PF01189 16S rRNA methyltransferase RsmB/F RG60_RS24435 PF01029 NusB family RG60_RS24440 PF00551 Formyl transferase RG60_RS24440 PF02911 Formyl transferase, C-terminal domain RG60_RS24445 PF01327 Polypeptide deformylase RG60_RS24450 PF02481 DNA recombination-mediator protein A RG60_RS24450 PF17782 DprA winged helix domain RG60_RS24455 PF04361 Protein of unknown function (DUF494) RG60_RS24460 PF01396 Topoisomerase DNA binding C4 zinc finger RG60_RS24465 PF01300 Telomere recombination RG60_RS24470 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RG60_RS24470 PF08501 Shikimate dehydrogenase substrate binding domain RG60_RS24470 PF01488 Shikimate / quinate 5-dehydrogenase RG60_RS24475 PF07369 Protein of unknown function (DUF1488) RG60_RS24480 PF00132 Bacterial transferase hexapeptide (six repeats) RG60_RS24520 PF00005 ABC transporter RG60_RS24525 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS24530 PF00528 Binding-protein-dependent transport system inner membrane component RG60_RS24535 PF00497 Bacterial extracellular solute-binding proteins, family 3 RG60_RS24550 PF00873 AcrB/AcrD/AcrF family RG60_RS24555 PF00529 HlyD membrane-fusion protein of T1SS RG60_RS24555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RG60_RS24565 PF00440 Bacterial regulatory proteins, tetR family RG60_RS24565 PF08361 MAATS-type transcriptional repressor, C-terminal region RG60_RS24570 PF10831 Protein of unknown function (DUF2556) RG60_RS24575 PF01555 DNA methylase RG60_RS24580 PF02954 Bacterial regulatory protein, Fis family RG60_RS24585 PF01207 Dihydrouridine synthase (Dus) RG60_RS24595 PF00474 Sodium:solute symporter family RG60_RS24600 PF06196 Protein of unknown function (DUF997) RG60_RS24605 PF02785 Biotin carboxylase C-terminal domain RG60_RS24605 PF00289 Biotin carboxylase, N-terminal domain RG60_RS24605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RG60_RS24610 PF00364 Biotin-requiring enzyme RG60_RS24620 PF01794 Ferric reductase like transmembrane component RG60_RS24625 PF08240 Alcohol dehydrogenase GroES-like domain RG60_RS24625 PF00107 Zinc-binding dehydrogenase RG60_RS24630 PF17157 Gammaproteobacterial periplasmic sensor domain RG60_RS24630 PF00563 EAL domain RG60_RS24630 PF00990 Diguanylate cyclase, GGDEF domain RG60_RS24650 PF04085 rod shape-determining protein MreC RG60_RS24655 PF04093 rod shape-determining protein MreD RG60_RS24660 PF02545 Maf-like protein RG60_RS24665 PF10150 Ribonuclease E/G family RG60_RS24665 PF00575 S1 RNA binding domain RG60_RS24670 PF13502 AsmA-like C-terminal region RG60_RS24670 PF13116 Protein of unknown function RG60_RS24680 PF01523 Putative modulator of DNA gyrase RG60_RS24685 PF03466 LysR substrate binding domain RG60_RS24685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS24690 PF07869 Protein of unknown function (DUF1656) RG60_RS24695 PF13533 Biotin-lipoyl like RG60_RS24700 PF04632 Fusaric acid resistance protein family RG60_RS24705 PF01337 Barstar (barnase inhibitor) RG60_RS24710 PF07338 Protein of unknown function (DUF1471) RG60_RS24715 PF02863 Arginine repressor, C-terminal domain RG60_RS24715 PF01316 Arginine repressor, DNA binding domain RG60_RS24720 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RG60_RS24720 PF00056 lactate/malate dehydrogenase, NAD binding domain RG60_RS24725 PF13180 PDZ domain RG60_RS24730 PF13180 PDZ domain RG60_RS24730 PF00595 PDZ domain RG60_RS24735 PF06295 Protein of unknown function (DUF1043) RG60_RS24740 PF03969 AFG1-like ATPase RG60_RS24745 PF00572 Ribosomal protein L13 RG60_RS24750 PF00380 Ribosomal protein S9/S16 RG60_RS24755 PF02798 Glutathione S-transferase, N-terminal domain RG60_RS24755 PF00043 Glutathione S-transferase, C-terminal domain RG60_RS24760 PF04386 Stringent starvation protein B RG60_RS24765 PF03606 C4-dicarboxylate anaerobic carrier RG60_RS24775 PF07729 FCD domain RG60_RS24775 PF00392 Bacterial regulatory proteins, gntR family RG60_RS24780 PF00701 Dihydrodipicolinate synthetase family RG60_RS24785 PF07690 Major Facilitator Superfamily RG60_RS24790 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase RG60_RS24795 PF00480 ROK family RG60_RS24800 PF04074 YhcH/YjgK/YiaL RG60_RS24810 PF06250 YhcG PDDEXK nuclease domain RG60_RS24810 PF17761 DUF1016 N-terminal domain RG60_RS24815 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG60_RS24815 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RG60_RS24820 PF00310 Glutamine amidotransferases class-II RG60_RS24820 PF01645 Conserved region in glutamate synthase RG60_RS24820 PF01493 GXGXG motif RG60_RS24820 PF04898 Glutamate synthase central domain RG60_RS24830 PF04055 Radical SAM superfamily RG60_RS24830 PF16199 Radical_SAM C-terminal domain RG60_RS24835 PF00072 Response regulator receiver domain RG60_RS24835 PF01627 Hpt domain RG60_RS24835 PF00989 PAS fold RG60_RS24835 PF00512 His Kinase A (phospho-acceptor) domain RG60_RS24835 PF18415 Histidine kinase receptor ArcB trans-membrane domain RG60_RS24835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS24845 PF00912 Transglycosylase RG60_RS24850 PF10707 PhoP regulatory network protein YrbL RG60_RS24855 PF00381 PTS HPr component phosphorylation site RG60_RS24860 PF03668 P-loop ATPase protein family RG60_RS24865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RG60_RS24870 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RG60_RS24875 PF00309 Sigma-54 factor, Activator interacting domain (AID) RG60_RS24875 PF04552 Sigma-54, DNA binding domain RG60_RS24875 PF04963 Sigma-54 factor, core binding domain RG60_RS24880 PF00005 ABC transporter RG60_RS24880 PF12399 Branched-chain amino acid ATP-binding cassette transporter RG60_RS24885 PF03968 OstA-like protein RG60_RS24890 PF06835 Lipopolysaccharide-assembly, LptC-related RG60_RS24900 PF01380 SIS domain RG60_RS24900 PF00571 CBS domain RG60_RS24905 PF01699 Sodium/calcium exchanger protein RG60_RS24910 PF00005 ABC transporter RG60_RS24915 PF02405 Permease MlaE RG60_RS24920 PF02470 MlaD protein RG60_RS24925 PF05494 MlaC protein RG60_RS24930 PF13466 STAS domain RG60_RS24935 PF01722 BolA-like protein RG60_RS24940 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RG60_RS24945 PF13693 Winged helix-turn-helix DNA-binding RG60_RS24950 PF00348 Polyprenyl synthetase RG60_RS24955 PF00829 Ribosomal prokaryotic L21 protein RG60_RS24960 PF01016 Ribosomal L27 protein RG60_RS24965 PF00892 EamA-like transporter family RG60_RS24970 PF01926 50S ribosome-binding GTPase RG60_RS24970 PF01018 GTP1/OBG RG60_RS24975 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family RG60_RS24980 PF01272 Transcription elongation factor, GreA/GreB, C-term RG60_RS24980 PF03449 Transcription elongation factor, N-terminal RG60_RS24985 PF01985 CRS1 / YhbY (CRM) domain RG60_RS24990 PF01728 FtsJ-like methyltransferase RG60_RS24995 PF00004 ATPase family associated with various cellular activities (AAA) RG60_RS24995 PF17862 AAA+ lid domain RG60_RS24995 PF06480 FtsH Extracellular RG60_RS24995 PF01434 Peptidase family M41 RG60_RS25000 PF00809 Pterin binding enzyme RG60_RS25005 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RG60_RS25005 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RG60_RS25005 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RG60_RS25005 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RG60_RS25010 PF03840 Preprotein translocase SecG subunit RG60_RS25025 PF00884 Sulfatase RG60_RS25030 PF00764 Arginosuccinate synthase RG60_RS25040 PF17384 RimP C-terminal SH3 domain RG60_RS25040 PF02576 RimP N-terminal domain RG60_RS25045 PF00575 S1 RNA binding domain RG60_RS25045 PF08529 NusA N-terminal domain RG60_RS25045 PF13184 NusA-like KH domain RG60_RS25050 PF11987 Translation-initiation factor 2 RG60_RS25050 PF04760 Translation initiation factor IF-2, N-terminal region RG60_RS25050 PF00009 Elongation factor Tu GTP binding domain RG60_RS25050 PF08364 Bacterial translation initiation factor IF-2 associated region RG60_RS25055 PF02033 Ribosome-binding factor A RG60_RS25060 PF09157 Pseudouridine synthase II TruB, C-terminal RG60_RS25060 PF16198 tRNA pseudouridylate synthase B C-terminal domain RG60_RS25060 PF01509 TruB family pseudouridylate synthase (N terminal domain) RG60_RS25065 PF00312 Ribosomal protein S15 RG60_RS25070 PF01138 3' exoribonuclease family, domain 1 RG60_RS25070 PF03725 3' exoribonuclease family, domain 2 RG60_RS25070 PF00575 S1 RNA binding domain RG60_RS25070 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RG60_RS25070 PF00013 KH domain RG60_RS25075 PF13181 Tetratricopeptide repeat RG60_RS25075 PF07719 Tetratricopeptide repeat RG60_RS25085 PF00270 DEAD/DEAH box helicase RG60_RS25085 PF12343 Cold shock protein DEAD box A RG60_RS25085 PF00271 Helicase conserved C-terminal domain RG60_RS25085 PF03880 DbpA RNA binding domain RG60_RS25095 PF03222 Tryptophan/tyrosine permease family RG60_RS25100 PF00296 Luciferase-like monooxygenase RG60_RS25105 PF02371 Transposase IS116/IS110/IS902 family RG60_RS25105 PF01548 Transposase RG60_RS25110 PF01136 Peptidase family U32 RG60_RS25115 PF01136 Peptidase family U32 RG60_RS25120 PF02036 SCP-2 sterol transfer family RG60_RS25125 PF13508 Acetyltransferase (GNAT) domain RG60_RS25130 PF01541 GIY-YIG catalytic domain RG60_RS25140 PF01965 DJ-1/PfpI family RG60_RS25145 PF13460 NAD(P)H-binding RG60_RS25150 PF03773 Predicted permease RG60_RS25155 PF04972 BON domain RG60_RS25160 PF13580 SIS domain RG60_RS25165 PF02021 Uncharacterised protein family UPF0102 RG60_RS25170 PF04348 LppC putative lipoprotein RG60_RS25175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RG60_RS25180 PF00419 Fimbrial protein RG60_RS25185 PF13953 PapC C-terminal domain RG60_RS25185 PF13954 PapC N-terminal domain RG60_RS25185 PF00577 Outer membrane usher protein RG60_RS25190 PF02753 Pili assembly chaperone PapD, C-terminal domain RG60_RS25190 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG60_RS25195 PF00419 Fimbrial protein RG60_RS25200 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RG60_RS25205 PF03613 PTS system mannose/fructose/sorbose family IID component RG60_RS25210 PF03609 PTS system sorbose-specific iic component RG60_RS25215 PF03830 PTS system sorbose subfamily IIB component RG60_RS25220 PF01116 Fructose-bisphosphate aldolase class-II RG60_RS25225 PF01380 SIS domain RG60_RS25230 PF01979 Amidohydrolase family RG60_RS25235 PF03610 PTS system fructose IIA component RG60_RS25240 PF03613 PTS system mannose/fructose/sorbose family IID component RG60_RS25245 PF03609 PTS system sorbose-specific iic component RG60_RS25250 PF03830 PTS system sorbose subfamily IIB component RG60_RS25255 PF08013 Tagatose 6 phosphate kinase RG60_RS25265 PF08220 DeoR-like helix-turn-helix domain RG60_RS25265 PF00455 DeoR C terminal sensor domain RG60_RS25270 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system RG60_RS25275 PF15937 prlF antitoxin for toxin YhaV_toxin RG60_RS25280 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus RG60_RS25280 PF08666 SAF domain RG60_RS25285 PF07690 Major Facilitator Superfamily RG60_RS25290 PF03328 HpcH/HpaI aldolase/citrate lyase family RG60_RS25295 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RG60_RS25295 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RG60_RS25300 PF02595 Glycerate kinase family RG60_RS25330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS25330 PF03466 LysR substrate binding domain RG60_RS25335 PF00291 Pyridoxal-phosphate dependent enzyme RG60_RS25340 PF03222 Tryptophan/tyrosine permease family RG60_RS25345 PF00871 Acetokinase family RG60_RS25350 PF01228 Glycine radical RG60_RS25350 PF02901 Pyruvate formate lyase-like RG60_RS25355 PF01042 Endoribonuclease L-PSP RG60_RS25360 PF03315 Serine dehydratase beta chain RG60_RS25360 PF03313 Serine dehydratase alpha chain RG60_RS25370 PF03313 Serine dehydratase alpha chain RG60_RS25380 PF17954 Quercetinase C-terminal cupin domain RG60_RS25380 PF02678 Pirin RG60_RS25385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS25385 PF03466 LysR substrate binding domain RG60_RS25395 PF05656 Protein of unknown function (DUF805) RG60_RS25400 PF05656 Protein of unknown function (DUF805) RG60_RS25405 PF13409 Glutathione S-transferase, N-terminal domain RG60_RS25410 PF07681 DoxX RG60_RS25415 PF13997 YqjK-like protein RG60_RS25420 PF07332 Putative Actinobacterial Holin-X, holin superfamily III RG60_RS25425 PF05957 Bacterial protein of unknown function (DUF883) RG60_RS25430 PF06476 Protein of unknown function (DUF1090) RG60_RS25435 PF13721 SecD export protein N-terminal TM region RG60_RS25440 PF09335 SNARE associated Golgi protein RG60_RS25445 PF00392 Bacterial regulatory proteins, gntR family RG60_RS25445 PF07729 FCD domain RG60_RS25455 PF04449 CS1 type fimbrial major subunit RG60_RS25460 PF15976 CS1-pili formation C-terminal RG60_RS25460 PF16967 E-set like domain RG60_RS25460 PF17271 TcfC Usher-like barrel domain RG60_RS25470 PF07690 Major Facilitator Superfamily RG60_RS25475 PF02614 Glucuronate isomerase RG60_RS25480 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus RG60_RS25480 PF08666 SAF domain RG60_RS25485 PF10688 Bacterial inner membrane protein RG60_RS25490 PF00375 Sodium:dicarboxylate symporter family RG60_RS25495 PF03741 Integral membrane protein TerC family RG60_RS25500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RG60_RS25505 PF02698 DUF218 domain RG60_RS25510 PF01863 Protein of unknown function DUF45 RG60_RS25515 PF05175 Methyltransferase small domain RG60_RS25520 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system RG60_RS25525 PF01381 Helix-turn-helix RG60_RS25530 PF07992 Pyridine nucleotide-disulphide oxidoreductase RG60_RS25530 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RG60_RS25535 PF01204 Trehalase RG60_RS25545 PF13520 Amino acid permease RG60_RS25550 PF04074 YhcH/YjgK/YiaL RG60_RS25555 PF02836 Glycosyl hydrolases family 2, TIM barrel domain RG60_RS25555 PF02837 Glycosyl hydrolases family 2, sugar binding domain RG60_RS25555 PF00703 Glycosyl hydrolases family 2 RG60_RS25555 PF02929 Beta galactosidase small chain RG60_RS25555 PF16353 Domain of unknown function(DUF4981) RG60_RS25560 PF00356 Bacterial regulatory proteins, lacI family RG60_RS25570 PF01588 Putative tRNA binding domain RG60_RS25575 PF00202 Aminotransferase class-III RG60_RS25585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RG60_RS25585 PF08447 PAS fold RG60_RS25590 PF03551 Transcriptional regulator PadR-like family RG60_RS25595 PF04954 Siderophore-interacting protein RG60_RS25595 PF08021 Siderophore-interacting FAD-binding domain RG60_RS25605 PF03167 Uracil DNA glycosylase superfamily RG60_RS25610 PF04546 Sigma-70, non-essential region RG60_RS25610 PF03979 Sigma-70 factor, region 1.1 RG60_RS25610 PF00140 Sigma-70 factor, region 1.2 RG60_RS25610 PF04542 Sigma-70 region 2 RG60_RS25610 PF04539 Sigma-70 region 3 RG60_RS25610 PF04545 Sigma-70, region 4 RG60_RS25620 PF08275 DNA primase catalytic core, N-terminal domain RG60_RS25620 PF08278 DNA primase DnaG DnaB-binding RG60_RS25620 PF01807 CHC2 zinc finger RG60_RS25620 PF10410 DnaB-helicase binding domain of primase RG60_RS25625 PF01165 Ribosomal protein S21 RG60_RS25635 PF00814 Glycoprotease family RG60_RS25640 PF00939 Sodium:sulfate symporter transmembrane region RG60_RS25645 PF05683 Fumarase C-terminus RG60_RS25655 PF03466 LysR substrate binding domain RG60_RS25655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RG60_RS25660 PF02660 Glycerol-3-phosphate acyltransferase RG60_RS25665 PF02152 Dihydroneopterin aldolase RG60_RS25670 PF02673 Bacitracin resistance protein BacA RG60_RS25675 PF12627 Probable RNA and SrmB- binding site of polymerase A RG60_RS25675 PF01966 HD domain RG60_RS25675 PF01743 Poly A polymerase head domain RG60_RS25680 PF08239 Bacterial SH3 domain RG60_RS25690 PF01928 CYTH domain RG60_RS25695 PF08335 GlnD PII-uridylyltransferase RG60_RS25695 PF03710 Glutamate-ammonia ligase adenylyltransferase RG60_RS25700 PF00294 pfkB family carbohydrate kinase RG60_RS25700 PF01467 Cytidylyltransferase-like RG60_RS25715 PF01145 SPFH domain / Band 7 family RG60_RS25715 PF15975 Flotillin RG60_RS25720 PF07290 Protein of unknown function (DUF1449) RG60_RS25725 PF08971 Glycogen synthesis protein RG60_RS25735 PF02753 Pili assembly chaperone PapD, C-terminal domain RG60_RS25735 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RG60_RS25740 PF13953 PapC C-terminal domain RG60_RS25740 PF00577 Outer membrane usher protein RG60_RS25740 PF13954 PapC N-terminal domain RG60_RS25745 PF00419 Fimbrial protein RG60_RS25750 PF04380 Membrane fusogenic activity RG60_RS25755 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RG60_RS25765 PF02535 ZIP Zinc transporter RG60_RS25770 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RG60_RS25775 PF03738 Glutathionylspermidine synthase preATP-grasp RG60_RS25780 PF06693 Protein of unknown function (DUF1190) RG60_RS25790 PF02321 Outer membrane efflux protein RG60_RS25795 PF00293 NUDIX domain RG60_RS25800 PF06853 Protein of unknown function (DUF1249) RG60_RS25805 PF00149 Calcineurin-like phosphoesterase RG60_RS25810 PF05728 Uncharacterised protein family (UPF0227) RG60_RS25815 PF00986 DNA gyrase B subunit, carboxyl terminus RG60_RS25815 PF00204 DNA gyrase B RG60_RS25815 PF01751 Toprim domain RG60_RS25815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS25820 PF03992 Antibiotic biosynthesis monooxygenase RG60_RS25825 PF02525 Flavodoxin-like fold RG60_RS25830 PF10840 Protein of unknown function (DUF2645) RG60_RS25835 PF00512 His Kinase A (phospho-acceptor) domain RG60_RS25835 PF08521 Two-component sensor kinase N-terminal RG60_RS25835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RG60_RS25840 PF00072 Response regulator receiver domain RG60_RS25840 PF00486 Transcriptional regulatory protein, C terminal RG60_RS25845 PF04076 Bacterial OB fold (BOF) protein RG60_RS25850 PF06445 GyrI-like small molecule binding domain RG60_RS25860 PF00521 DNA gyrase/topoisomerase IV, subunit A RG60_RS25860 PF03989 DNA gyrase C-terminal domain, beta-propeller RG60_RS25870 PF01553 Acyltransferase RG60_RS25875 PF07732 Multicopper oxidase RG60_RS25875 PF07731 Multicopper oxidase RG60_RS25875 PF00394 Multicopper oxidase RG60_RS25880 PF11842 Domain of unknown function (DUF3362) RG60_RS25880 PF04055 Radical SAM superfamily RG60_RS25880 PF08497 Radical SAM N-terminal RG60_RS25885 PF04728 Lipoprotein leucine-zipper RG60_RS25890 PF12883 Protein of unknown function (DUF3828) RG60_RS25895 PF00248 Aldo/keto reductase family RG60_RS25900 PF00465 Iron-containing alcohol dehydrogenase RG60_RS25910 PF12833 Helix-turn-helix domain RG60_RS25910 PF06719 AraC-type transcriptional regulator N-terminus RG60_RS25915 PF09335 SNARE associated Golgi protein RG60_RS25920 PF01053 Cys/Met metabolism PLP-dependent enzyme RG60_RS25930 PF01618 MotA/TolQ/ExbB proton channel family RG60_RS25935 PF02472 Biopolymer transport protein ExbD/TolR RG60_RS25950 PF03350 Uncharacterized protein family, UPF0114 RG60_RS25955 PF00248 Aldo/keto reductase family RG60_RS25960 PF01738 Dienelactone hydrolase family RG60_RS25965 PF11115 Protein of unknown function (DUF2623) RG60_RS25975 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RG60_RS25975 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal RG60_RS25980 PF13247 4Fe-4S dicluster domain RG60_RS25985 PF03916 Polysulphide reductase, NrfD RG60_RS25990 PF00374 Nickel-dependent hydrogenase RG60_RS25995 PF01750 Hydrogenase maturation protease RG60_RS26000 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE RG60_RS26005 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA RG60_RS26010 PF01455 HupF/HypC family RG60_RS26015 PF02798 Glutathione S-transferase, N-terminal domain RG60_RS26020 PF05257 CHAP domain RG60_RS26020 PF03738 Glutathionylspermidine synthase preATP-grasp RG60_RS26025 PF01384 Phosphate transporter family RG60_RS26045 PF01943 Polysaccharide biosynthesis protein RG60_RS26055 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) RG60_RS26060 PF03739 Lipopolysaccharide export system permease LptF/LptG RG60_RS26070 PF00155 Aminotransferase class I and II RG60_RS26075 PF00550 Phosphopantetheine attachment site RG60_RS26085 PF14535 AMP-binding enzyme C-terminal domain RG60_RS26085 PF00501 AMP-binding enzyme RG60_RS26100 PF00392 Bacterial regulatory proteins, gntR family RG60_RS26100 PF07729 FCD domain RG60_RS26105 PF01565 FAD binding domain RG60_RS26105 PF02913 FAD linked oxidases, C-terminal domain RG60_RS26110 PF01565 FAD binding domain RG60_RS26115 PF02754 Cysteine-rich domain RG60_RS26115 PF13183 4Fe-4S dicluster domain RG60_RS26120 PF03928 Haem-degrading RG60_RS26125 PF01274 Malate synthase RG60_RS26130 PF02652 L-lactate permease RG60_RS26145 PF13402 Peptidase M60, enhancin and enhancin-like RG60_RS26145 PF13322 Domain of unknown function (DUF4092) RG60_RS26145 PF17291 N-terminal domain of M60-like peptidases RG60_RS26150 PF01478 Type IV leader peptidase family RG60_RS26150 PF06750 Bacterial Peptidase A24 N-terminal domain RG60_RS26155 PF16549 Type II secretion system (T2SS) pilotin, S protein RG60_RS26160 PF11356 Type II secretion system protein C RG60_RS26165 PF00263 Bacterial type II and III secretion system protein RG60_RS26165 PF03958 Bacterial type II/III secretion system short domain RG60_RS26170 PF00437 Type II/IV secretion system protein RG60_RS26175 PF00482 Type II secretion system (T2SS), protein F RG60_RS26180 PF07963 Prokaryotic N-terminal methylation motif RG60_RS26180 PF08334 Type II secretion system (T2SS), protein G RG60_RS26185 PF12019 Type II transport protein GspH RG60_RS26190 PF02501 Type II secretion system (T2SS), protein I RG60_RS26190 PF07963 Prokaryotic N-terminal methylation motif RG60_RS26195 PF11612 Type II secretion system (T2SS), protein J RG60_RS26195 PF07963 Prokaryotic N-terminal methylation motif RG60_RS26200 PF03934 Type II secretion system (T2SS), protein K RG60_RS26205 PF12693 GspL periplasmic domain RG60_RS26210 PF04612 Type II secretion system (T2SS), protein M RG60_RS26225 PF06755 CbtA_toxin of type IV toxin-antitoxin system RG60_RS26230 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A RG60_RS26240 PF06174 Protein of unknown function (DUF987) RG60_RS26325 PF08479 POTRA domain, ShlB-type RG60_RS26325 PF17287 POTRA domain RG60_RS26325 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RG60_RS26330 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RG60_RS26330 PF08479 POTRA domain, ShlB-type RG60_RS26330 PF17287 POTRA domain RG60_RS26350 PF13332 Hemagglutinin repeat RG60_RS26350 PF05860 haemagglutination activity domain RG60_RS26350 PF04829 Pre-toxin domain with VENN motif RG60_RS26350 PF13018 Extended Signal Peptide of Type V secretion system RG60_RS26480 PF11922 Domain of unknown function (DUF3440) RG60_RS26480 PF01507 Phosphoadenosine phosphosulfate reductase family RG60_RS26760 PF03895 YadA-like membrane anchor domain RG60_RS26760 PF05662 Coiled stalk of trimeric autotransporter adhesin RG60_RS26760 PF05658 Head domain of trimeric autotransporter adhesin RG60_RS26850 PF08845 Toxin SymE, type I toxin-antitoxin system RG60_RS26945 PF02567 Phenazine biosynthesis-like protein RG60_RS26990 PF14765 Polyketide synthase dehydratase RG60_RS26990 PF00501 AMP-binding enzyme RG60_RS26990 PF13193 AMP-binding enzyme C-terminal domain RG60_RS26990 PF00668 Condensation domain RG60_RS26990 PF00550 Phosphopantetheine attachment site RG60_RS26990 PF08659 KR domain RG60_RS26990 PF16197 Ketoacyl-synthetase C-terminal extension RG60_RS26990 PF00109 Beta-ketoacyl synthase, N-terminal domain RG60_RS26990 PF02801 Beta-ketoacyl synthase, C-terminal domain RG60_RS27105 PF01276 Orn/Lys/Arg decarboxylase, major domain RG60_RS27105 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RG60_RS27105 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RG60_RS27335 PF13356 Arm DNA-binding domain RG60_RS27335 PF00589 Phage integrase family RG60_RS27685 PF08494 DEAD/H associated RG60_RS27685 PF00270 DEAD/DEAH box helicase RG60_RS27685 PF00271 Helicase conserved C-terminal domain RG60_RS27920 PF13018 Extended Signal Peptide of Type V secretion system RG60_RS27920 PF03797 Autotransporter beta-domain RG60_RS27920 PF16168 Adhesin of bacterial autotransporter system, probable stalk