locus-tag class description INR48_RS00010 PF05840 Bacteriophage replication gene A protein (GPA) INR48_RS00015 PF03498 Cytolethal distending toxin A/C domain INR48_RS00020 PF03372 Endonuclease/Exonuclease/phosphatase family INR48_RS00025 PF03498 Cytolethal distending toxin A/C domain INR48_RS00120 PF08400 Prophage tail fibre N-terminal INR48_RS00120 PF03335 Phage tail fibre repeat INR48_RS00120 PF07484 Phage Tail Collar Domain INR48_RS00125 PF02413 Caudovirales tail fibre assembly protein, lambda gpK INR48_RS00170 PF04606 Ogr/Delta-like zinc finger INR48_RS00175 PF01545 Cation efflux family INR48_RS00175 PF16916 Dimerisation domain of Zinc Transporter INR48_RS00180 PF00365 Phosphofructokinase INR48_RS00190 PF02611 CDP-diacylglycerol pyrophosphatase INR48_RS00195 PF00121 Triosephosphate isomerase INR48_RS00200 PF07305 Protein of unknown function (DUF1454) INR48_RS00205 PF05656 Protein of unknown function (DUF805) INR48_RS00210 PF04175 Protein of unknown function (DUF406) INR48_RS00215 PF00582 Universal stress protein family INR48_RS00220 PF00970 Oxidoreductase FAD-binding domain INR48_RS00220 PF00175 Oxidoreductase NAD-binding domain INR48_RS00225 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded INR48_RS00230 PF02782 FGGY family of carbohydrate kinases, C-terminal domain INR48_RS00230 PF00370 FGGY family of carbohydrate kinases, N-terminal domain INR48_RS00235 PF00230 Major intrinsic protein INR48_RS00240 PF06005 Cell division protein ZapB INR48_RS00255 PF03737 Aldolase/RraA INR48_RS00260 PF01040 UbiA prenyltransferase family INR48_RS00265 PF00004 ATPase family associated with various cellular activities (AAA) INR48_RS00265 PF10431 C-terminal, D2-small domain, of ClpB protein INR48_RS00265 PF07724 AAA domain (Cdc48 subfamily) INR48_RS00270 PF00227 Proteasome subunit INR48_RS00275 PF05036 Sporulation related domain INR48_RS00280 PF00356 Bacterial regulatory proteins, lacI family INR48_RS00285 PF00270 DEAD/DEAH box helicase INR48_RS00285 PF00271 Helicase conserved C-terminal domain INR48_RS00285 PF17764 3′ DNA-binding domain (3′BD) INR48_RS00285 PF18074 Primosomal protein N C-terminal domain INR48_RS00285 PF18319 PriA DNA helicase Cys-rich region (CRR) domain INR48_RS00290 PF01197 Ribosomal protein L31 INR48_RS00295 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family INR48_RS00300 PF01340 Met Apo-repressor, MetJ INR48_RS00305 PF01053 Cys/Met metabolism PLP-dependent enzyme INR48_RS00310 PF03447 Homoserine dehydrogenase, NAD binding domain INR48_RS00310 PF00696 Amino acid kinase family INR48_RS00310 PF00742 Homoserine dehydrogenase INR48_RS00320 PF00149 Calcineurin-like phosphoesterase INR48_RS00320 PF02872 5'-nucleotidase, C-terminal domain INR48_RS00325 PF02219 Methylenetetrahydrofolate reductase INR48_RS00330 PF00141 Peroxidase INR48_RS00335 PF00892 EamA-like transporter family INR48_RS00340 PF06940 Domain of unknown function (DUF1287) INR48_RS00345 PF00465 Iron-containing alcohol dehydrogenase INR48_RS00350 PF00923 Transaldolase/Fructose-6-phosphate aldolase INR48_RS00355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INR48_RS00355 PF05524 PEP-utilising enzyme, N-terminal INR48_RS00355 PF00391 PEP-utilising enzyme, mobile domain INR48_RS00355 PF02896 PEP-utilising enzyme, TIM barrel domain INR48_RS00355 PF00381 PTS HPr component phosphorylation site INR48_RS00365 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INR48_RS00370 PF01228 Glycine radical INR48_RS00370 PF02901 Pyruvate formate lyase-like INR48_RS00375 PF04055 Radical SAM superfamily INR48_RS00380 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INR48_RS00385 PF12833 Helix-turn-helix domain INR48_RS00390 PF00884 Sulfatase INR48_RS00395 PF00311 Phosphoenolpyruvate carboxylase INR48_RS00400 PF01546 Peptidase family M20/M25/M40 INR48_RS00400 PF07687 Peptidase dimerisation domain INR48_RS00405 PF01118 Semialdehyde dehydrogenase, NAD binding domain INR48_RS00405 PF02774 Semialdehyde dehydrogenase, dimerisation domain INR48_RS00410 PF00696 Amino acid kinase family INR48_RS00415 PF00206 Lyase INR48_RS00415 PF14698 Argininosuccinate lyase C-terminal INR48_RS00420 PF03466 LysR substrate binding domain INR48_RS00420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS00425 PF07992 Pyridine nucleotide-disulphide oxidoreductase INR48_RS00425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain INR48_RS00430 PF00440 Bacterial regulatory proteins, tetR family INR48_RS00435 PF07226 Protein of unknown function (DUF1422) INR48_RS00440 PF05958 tRNA (Uracil-5-)-methyltransferase INR48_RS00445 PF00593 TonB dependent receptor INR48_RS00445 PF07715 TonB-dependent Receptor Plug Domain INR48_RS00450 PF01177 Asp/Glu/Hydantoin racemase INR48_RS00475 PF01565 FAD binding domain INR48_RS00475 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain INR48_RS00480 PF08279 HTH domain INR48_RS00480 PF02237 Biotin protein ligase C terminal domain INR48_RS00480 PF03099 Biotin/lipoate A/B protein ligase family INR48_RS00485 PF00485 Phosphoribulokinase / Uridine kinase family INR48_RS00510 PF03143 Elongation factor Tu C-terminal domain INR48_RS00510 PF03144 Elongation factor Tu domain 2 INR48_RS00510 PF00009 Elongation factor Tu GTP binding domain INR48_RS00515 PF00584 SecE/Sec61-gamma subunits of protein translocation complex INR48_RS00520 PF02357 Transcription termination factor nusG INR48_RS00520 PF00467 KOW motif INR48_RS00525 PF03946 Ribosomal protein L11, N-terminal domain INR48_RS00525 PF00298 Ribosomal protein L11, RNA binding domain INR48_RS00530 PF00687 Ribosomal protein L1p/L10e family INR48_RS00535 PF00466 Ribosomal protein L10 INR48_RS00540 PF00542 Ribosomal protein L7/L12 C-terminal domain INR48_RS00540 PF16320 Ribosomal protein L7/L12 dimerisation domain INR48_RS00545 PF04561 RNA polymerase Rpb2, domain 2 INR48_RS00545 PF00562 RNA polymerase Rpb2, domain 6 INR48_RS00545 PF04565 RNA polymerase Rpb2, domain 3 INR48_RS00545 PF04563 RNA polymerase beta subunit INR48_RS00545 PF04560 RNA polymerase Rpb2, domain 7 INR48_RS00545 PF10385 RNA polymerase beta subunit external 1 domain INR48_RS00550 PF04998 RNA polymerase Rpb1, domain 5 INR48_RS00550 PF04997 RNA polymerase Rpb1, domain 1 INR48_RS00550 PF00623 RNA polymerase Rpb1, domain 2 INR48_RS00550 PF04983 RNA polymerase Rpb1, domain 3 INR48_RS00550 PF05000 RNA polymerase Rpb1, domain 4 INR48_RS00560 PF06968 Biotin and Thiamin Synthesis associated domain INR48_RS00560 PF04055 Radical SAM superfamily INR48_RS00565 PF05690 Thiazole biosynthesis protein ThiG INR48_RS00570 PF02597 ThiS family INR48_RS00575 PF00899 ThiF family INR48_RS00580 PF02581 Thiamine monophosphate synthase INR48_RS00585 PF13667 ThiC-associated domain INR48_RS00585 PF01964 Radical SAM ThiC family INR48_RS00590 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ INR48_RS00595 PF00293 NUDIX domain INR48_RS00595 PF09297 NADH pyrophosphatase zinc ribbon domain INR48_RS00600 PF01208 Uroporphyrinogen decarboxylase (URO-D) INR48_RS00605 PF04493 Endonuclease V INR48_RS00610 PF04222 Protein of unknown function (DUF416) INR48_RS00615 PF00216 Bacterial DNA-binding protein INR48_RS00620 PF07356 Protein of unknown function (DUF1481) INR48_RS00625 PF13801 Heavy-metal resistance INR48_RS00630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS00630 PF00512 His Kinase A (phospho-acceptor) domain INR48_RS00635 PF02954 Bacterial regulatory protein, Fis family INR48_RS00635 PF00072 Response regulator receiver domain INR48_RS00635 PF00158 Sigma-54 interaction domain INR48_RS00640 PF02843 Phosphoribosylglycinamide synthetase, C domain INR48_RS00640 PF02844 Phosphoribosylglycinamide synthetase, N domain INR48_RS00640 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain INR48_RS00645 PF02142 MGS-like domain INR48_RS00645 PF01808 AICARFT/IMPCHase bienzyme INR48_RS00670 PF13673 Acetyltransferase (GNAT) domain INR48_RS00675 PF04204 Homoserine O-succinyltransferase INR48_RS00680 PF01274 Malate synthase INR48_RS00685 PF00463 Isocitrate lyase family INR48_RS00690 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) INR48_RS00695 PF07906 ShET2 enterotoxin, N-terminal region INR48_RS00700 PF09339 IclR helix-turn-helix domain INR48_RS00700 PF01614 Bacterial transcriptional regulator INR48_RS00705 PF02607 B12 binding domain INR48_RS00705 PF00809 Pterin binding enzyme INR48_RS00705 PF02574 Homocysteine S-methyltransferase INR48_RS00705 PF02310 B12 binding domain INR48_RS00705 PF02965 Vitamin B12 dependent methionine synthase, activation domain INR48_RS00710 PF02690 Na+/Pi-cotransporter INR48_RS00715 PF03575 Peptidase family S51 INR48_RS00720 PF00107 Zinc-binding dehydrogenase INR48_RS00720 PF08240 Alcohol dehydrogenase GroES-like domain INR48_RS00725 PF03613 PTS system mannose/fructose/sorbose family IID component INR48_RS00730 PF03609 PTS system sorbose-specific iic component INR48_RS00735 PF03830 PTS system sorbose subfamily IIB component INR48_RS00740 PF03610 PTS system fructose IIA component INR48_RS00745 PF00106 short chain dehydrogenase INR48_RS00750 PF13936 Helix-turn-helix domain INR48_RS00750 PF04198 Putative sugar-binding domain INR48_RS00755 PF01479 S4 domain INR48_RS00755 PF00849 RNA pseudouridylate synthase INR48_RS00760 PF11656 YjbD family (DUF3811) INR48_RS00765 PF01842 ACT domain INR48_RS00765 PF00696 Amino acid kinase family INR48_RS00770 PF00342 Phosphoglucose isomerase INR48_RS00775 PF11106 Exopolysaccharide production protein YjbE INR48_RS00780 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF INR48_RS00785 PF06251 Capsule biosynthesis GfcC INR48_RS00790 PF06082 Exopolysaccharide biosynthesis protein YbjH INR48_RS00795 PF17089 Uncharacterised protein family INR48_RS00800 PF06146 Phosphate-starvation-inducible E INR48_RS00805 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS00810 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS00810 PF14785 Maltose transport system permease protein MalF P2 domain INR48_RS00815 PF01547 Bacterial extracellular solute-binding protein INR48_RS00820 PF17912 MalK OB fold domain INR48_RS00820 PF00005 ABC transporter INR48_RS00825 PF02264 LamB porin INR48_RS00830 PF07148 Maltose operon periplasmic protein precursor (MalM) INR48_RS00835 PF13981 SopA-like central domain INR48_RS00835 PF13599 Pentapeptide repeats (9 copies) INR48_RS00840 PF04345 Chorismate lyase INR48_RS00845 PF01040 UbiA prenyltransferase family INR48_RS00850 PF01553 Acyltransferase INR48_RS00855 PF01219 Prokaryotic diacylglycerol kinase INR48_RS00860 PF00717 Peptidase S24-like INR48_RS00860 PF01726 LexA DNA binding domain INR48_RS00865 PF01554 MatE INR48_RS00870 PF05532 CsbD-like INR48_RS00875 PF01475 Ferric uptake regulator family INR48_RS00880 PF10897 Protein of unknown function (DUF2713) INR48_RS00885 PF01207 Dihydrouridine synthase (Dus) INR48_RS00890 PF09583 Phage shock protein G (Phageshock_PspG) INR48_RS00895 PF08240 Alcohol dehydrogenase GroES-like domain INR48_RS00895 PF00107 Zinc-binding dehydrogenase INR48_RS00900 PF03796 DnaB-like helicase C terminal domain INR48_RS00900 PF00772 DnaB-like helicase N terminal domain INR48_RS00905 PF01168 Alanine racemase, N-terminal domain INR48_RS00905 PF00842 Alanine racemase, C-terminal domain INR48_RS00910 PF00155 Aminotransferase class I and II INR48_RS00920 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) INR48_RS00925 PF01894 Uncharacterised protein family UPF0047 INR48_RS00930 PF04237 YjbR INR48_RS00935 PF17755 UvrA DNA-binding domain INR48_RS00935 PF00005 ABC transporter INR48_RS00935 PF17760 UvrA interaction domain INR48_RS00940 PF00436 Single-strand binding protein family INR48_RS00945 PF15940 Family of unknown function INR48_RS00950 PF00563 EAL domain INR48_RS00950 PF12792 CSS motif domain associated with EAL INR48_RS00955 PF12833 Helix-turn-helix domain INR48_RS00960 PF00376 MerR family regulatory protein INR48_RS00960 PF09278 MerR, DNA binding INR48_RS00965 PF00860 Permease family INR48_RS00970 PF00999 Sodium/hydrogen exchanger family INR48_RS00975 PF00805 Pentapeptide repeats (8 copies) INR48_RS00980 PF00474 Sodium:solute symporter family INR48_RS00985 PF04341 Protein of unknown function, DUF485 INR48_RS00990 PF16177 Acetyl-coenzyme A synthetase N-terminus INR48_RS00990 PF00501 AMP-binding enzyme INR48_RS00990 PF13193 AMP-binding enzyme C-terminal domain INR48_RS00995 PF02335 Cytochrome c552 INR48_RS01000 PF13435 Cytochrome c554 and c-prime INR48_RS01000 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) INR48_RS01005 PF00037 4Fe-4S binding domain INR48_RS01005 PF13247 4Fe-4S dicluster domain INR48_RS01010 PF03916 Polysulphide reductase, NrfD INR48_RS01015 PF01578 Cytochrome C assembly protein INR48_RS01015 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal INR48_RS01030 PF00375 Sodium:dicarboxylate symporter family INR48_RS01035 PF08238 Sel1 repeat INR48_RS01045 PF02321 Outer membrane efflux protein INR48_RS01050 PF04632 Fusaric acid resistance protein family INR48_RS01055 PF00529 HlyD membrane-fusion protein of T1SS INR48_RS01055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INR48_RS01060 PF17090 Uncharacterised protein family INR48_RS01065 PF00753 Metallo-beta-lactamase superfamily INR48_RS01065 PF14864 Alkyl sulfatase C-terminal INR48_RS01065 PF14863 Alkyl sulfatase dimerisation INR48_RS01070 PF02502 Ribose/Galactose Isomerase INR48_RS01080 PF12706 Beta-lactamase superfamily domain INR48_RS01085 PF00583 Acetyltransferase (GNAT) family INR48_RS01095 PF07969 Amidohydrolase family INR48_RS01100 PF00005 ABC transporter INR48_RS01105 PF00005 ABC transporter INR48_RS01110 PF06007 Phosphonate metabolism protein PhnJ INR48_RS01115 PF05861 Bacterial phosphonate metabolism protein (PhnI) INR48_RS01120 PF05845 Bacterial phosphonate metabolism protein (PhnH) INR48_RS01125 PF06754 Phosphonate metabolism protein PhnG INR48_RS01130 PF00392 Bacterial regulatory proteins, gntR family INR48_RS01130 PF07702 UTRA domain INR48_RS01135 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS01145 PF00005 ABC transporter INR48_RS01150 PF06983 3-demethylubiquinone-9 3-methyltransferase INR48_RS01155 PF03831 PhnA domain INR48_RS01155 PF08274 PhnA Zinc-Ribbon INR48_RS01160 PF00350 Dynamin family INR48_RS01165 PF13990 YjcZ-like protein INR48_RS01170 PF08946 Osmosensory transporter coiled coil INR48_RS01170 PF00083 Sugar (and other) transporter INR48_RS01180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS01180 PF00512 His Kinase A (phospho-acceptor) domain INR48_RS01185 PF00486 Transcriptional regulatory protein, C terminal INR48_RS01185 PF00072 Response regulator receiver domain INR48_RS01190 PF00884 Sulfatase INR48_RS01190 PF08019 Phosphoethanolamine transferase EptA/EptB INR48_RS01195 PF13520 Amino acid permease INR48_RS01200 PF12833 Helix-turn-helix domain INR48_RS01205 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain INR48_RS01205 PF01276 Orn/Lys/Arg decarboxylase, major domain INR48_RS01205 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain INR48_RS01210 PF12833 Helix-turn-helix domain INR48_RS01215 PF02056 Family 4 glycosyl hydrolase INR48_RS01215 PF11975 Family 4 glycosyl hydrolase C-terminal domain INR48_RS01225 PF09997 Predicted membrane protein (DUF2238) INR48_RS01230 PF05681 Fumarate hydratase (Fumerase) INR48_RS01230 PF05683 Fumarase C-terminus INR48_RS01235 PF03605 Anaerobic c4-dicarboxylate membrane transporter INR48_RS01240 PF00072 Response regulator receiver domain INR48_RS01245 PF00989 PAS fold INR48_RS01245 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain INR48_RS01245 PF17203 Single cache domain 3 INR48_RS01245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS01250 PF06902 Divergent 4Fe-4S mono-cluster INR48_RS01255 PF14542 GCN5-related N-acetyl-transferase INR48_RS01260 PF11080 Endoribonuclease GhoS INR48_RS01265 PF10753 Toxin GhoT_OrtT INR48_RS01270 PF00152 tRNA synthetases class II (D, K and N) INR48_RS01270 PF01336 OB-fold nucleic acid binding domain INR48_RS01275 PF00854 POT family INR48_RS01280 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain INR48_RS01280 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain INR48_RS01280 PF01276 Orn/Lys/Arg decarboxylase, major domain INR48_RS01285 PF13520 Amino acid permease INR48_RS01290 PF00486 Transcriptional regulatory protein, C terminal INR48_RS01290 PF18500 CadC C-terminal domain 1 INR48_RS01305 PF11412 Disulphide bond corrector protein DsbC INR48_RS01305 PF02683 Cytochrome C biogenesis protein transmembrane region INR48_RS01310 PF03091 CutA1 divalent ion tolerance protein INR48_RS01315 PF03605 Anaerobic c4-dicarboxylate membrane transporter INR48_RS01320 PF10415 Fumarase C C-terminus INR48_RS01320 PF00206 Lyase INR48_RS01325 PF04186 FxsA cytoplasmic membrane protein INR48_RS01330 PF13520 Amino acid permease INR48_RS01335 PF00166 Chaperonin 10 Kd subunit INR48_RS01340 PF00118 TCP-1/cpn60 chaperonin family INR48_RS01345 PF13698 Domain of unknown function (DUF4156) INR48_RS01350 PF15922 YjeJ-like INR48_RS01355 PF04055 Radical SAM superfamily INR48_RS01360 PF08207 Elongation factor P (EF-P) KOW-like domain INR48_RS01360 PF09285 Elongation factor P, C-terminal INR48_RS01360 PF01132 Elongation factor P (EF-P) OB domain INR48_RS01365 PF08085 Entericidin EcnA/B family INR48_RS01370 PF08085 Entericidin EcnA/B family INR48_RS01375 PF00893 Small Multidrug Resistance protein INR48_RS01380 PF08212 Lipocalin-like domain INR48_RS01385 PF00144 Beta-lactamase INR48_RS01390 PF02313 Fumarate reductase subunit D INR48_RS01395 PF02300 Fumarate reductase subunit C INR48_RS01400 PF13085 2Fe-2S iron-sulfur cluster binding domain INR48_RS01400 PF13183 4Fe-4S dicluster domain INR48_RS01405 PF02910 Fumarate reductase flavoprotein C-term INR48_RS01405 PF00890 FAD binding domain INR48_RS01410 PF00152 tRNA synthetases class II (D, K and N) INR48_RS01415 PF13520 Amino acid permease INR48_RS01420 PF12794 Mechanosensitive ion channel inner membrane domain 1 INR48_RS01420 PF00924 Mechanosensitive ion channel INR48_RS01420 PF12795 Mechanosensitive ion channel porin domain INR48_RS01425 PF02666 Phosphatidylserine decarboxylase INR48_RS01430 PF03193 RsgA GTPase INR48_RS01435 PF00929 Exonuclease INR48_RS01460 PF08331 Domain of unknown function (DUF1730) INR48_RS01465 PF01256 Carbohydrate kinase INR48_RS01465 PF03853 YjeF-related protein N-terminus INR48_RS01470 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE INR48_RS01475 PF01520 N-acetylmuramoyl-L-alanine amidase INR48_RS01480 PF01119 DNA mismatch repair protein, C-terminal domain INR48_RS01480 PF08676 MutL C terminal dimerisation domain INR48_RS01490 PF17209 Hfq protein INR48_RS01495 PF01926 50S ribosome-binding GTPase INR48_RS01495 PF13167 GTP-binding GTPase N-terminal INR48_RS01495 PF16360 GTP-binding GTPase Middle Region INR48_RS01500 PF12221 Bacterial membrane protein N terminal INR48_RS01500 PF01145 SPFH domain / Band 7 family INR48_RS01505 PF01145 SPFH domain / Band 7 family INR48_RS01510 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) INR48_RS01515 PF00709 Adenylosuccinate synthetase INR48_RS01520 PF02082 Transcriptional regulator INR48_RS01525 PF08461 Ribonuclease R winged-helix domain INR48_RS01525 PF17876 Cold shock domain INR48_RS01525 PF08206 Ribonuclease B OB domain INR48_RS01525 PF00773 RNB domain INR48_RS01525 PF00575 S1 RNA binding domain INR48_RS01530 PF00588 SpoU rRNA Methylase family INR48_RS01530 PF08032 RNA 2'-O ribose methyltransferase substrate binding INR48_RS01535 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) INR48_RS01540 PF04012 PspA/IM30 family INR48_RS01545 PF10679 Protein of unknown function (DUF2491) INR48_RS01550 PF03994 Domain of Unknown Function (DUF350) INR48_RS01555 PF06693 Protein of unknown function (DUF1190) INR48_RS01560 PF03738 Glutathionylspermidine synthase preATP-grasp INR48_RS01565 PF18158 Adaptive response protein AidB N-terminal domain INR48_RS01565 PF02770 Acyl-CoA dehydrogenase, middle domain INR48_RS01565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INR48_RS01570 PF07338 Protein of unknown function (DUF1471) INR48_RS01575 PF07338 Protein of unknown function (DUF1471) INR48_RS01580 PF00326 Prolyl oligopeptidase family INR48_RS01585 PF08220 DeoR-like helix-turn-helix domain INR48_RS01585 PF00455 DeoR C terminal sensor domain INR48_RS01595 PF03611 PTS system sugar-specific permease component INR48_RS01600 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INR48_RS01605 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INR48_RS01610 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family INR48_RS01615 PF01261 Xylose isomerase-like TIM barrel INR48_RS01620 PF00596 Class II Aldolase and Adducin N-terminal domain INR48_RS01625 PF07338 Protein of unknown function (DUF1471) INR48_RS01630 PF01250 Ribosomal protein S6 INR48_RS01635 PF00436 Single-strand binding protein family INR48_RS01640 PF01084 Ribosomal protein S18 INR48_RS01645 PF03948 Ribosomal protein L9, C-terminal domain INR48_RS01645 PF01281 Ribosomal protein L9, N-terminal domain INR48_RS01650 PF10887 Protein of unknown function (DUF2686) INR48_RS01660 PF01797 Transposase IS200 like INR48_RS01665 PF07282 Putative transposase DNA-binding domain INR48_RS01665 PF01385 Probable transposase INR48_RS01665 PF12323 Helix-turn-helix domain INR48_RS01675 PF08525 Opacity-associated protein A N-terminal motif INR48_RS01675 PF04225 Opacity-associated protein A LysM-like domain INR48_RS01680 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase INR48_RS01680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase INR48_RS01685 PF00324 Amino acid permease INR48_RS01700 PF01814 Hemerythrin HHE cation binding domain INR48_RS01700 PF04405 Domain of Unknown function (DUF542) INR48_RS01705 PF00892 EamA-like transporter family INR48_RS01710 PF05368 NmrA-like family INR48_RS01715 PF01638 HxlR-like helix-turn-helix INR48_RS01720 PF00149 Calcineurin-like phosphoesterase INR48_RS01720 PF02872 5'-nucleotidase, C-terminal domain INR48_RS01725 PF00459 Inositol monophosphatase family INR48_RS01735 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) INR48_RS01740 PF06526 Protein of unknown function (DUF1107) INR48_RS01745 PF03471 Transporter associated domain INR48_RS01745 PF01595 Cyclin M transmembrane N-terminal domain INR48_RS01745 PF00571 CBS domain INR48_RS01750 PF01625 Peptide methionine sulfoxide reductase INR48_RS01755 PF17243 POTRA domain TamA domain 1 INR48_RS01755 PF07244 Surface antigen variable number repeat INR48_RS01755 PF01103 Surface antigen INR48_RS01760 PF04357 TamB, inner membrane protein subunit of TAM complex INR48_RS01765 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like INR48_RS01770 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin INR48_RS01775 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system INR48_RS01780 PF00719 Inorganic pyrophosphatase INR48_RS01785 PF13407 Periplasmic binding protein domain INR48_RS01790 PF00005 ABC transporter INR48_RS01795 PF02653 Branched-chain amino acid transport system / permease component INR48_RS01800 PF02653 Branched-chain amino acid transport system / permease component INR48_RS01805 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain INR48_RS01810 PF02875 Mur ligase family, glutamate ligase domain INR48_RS01810 PF08245 Mur ligase middle domain INR48_RS01810 PF01225 Mur ligase family, catalytic domain INR48_RS01815 PF04751 Protein of unknown function (DUF615) INR48_RS01820 PF01523 Putative modulator of DNA gyrase INR48_RS01825 PF07361 Cytochrome b562 INR48_RS01830 PF04221 RelB antitoxin INR48_RS01835 PF05016 ParE toxin of type II toxin-antitoxin system, parDE INR48_RS01845 PF13597 Anaerobic ribonucleoside-triphosphate reductase INR48_RS01845 PF03477 ATP cone domain INR48_RS01850 PF00128 Alpha amylase, catalytic domain INR48_RS01850 PF11941 Domain of unknown function (DUF3459) INR48_RS01855 PF02378 Phosphotransferase system, EIIC INR48_RS01855 PF00367 phosphotransferase system, EIIB INR48_RS01860 PF00356 Bacterial regulatory proteins, lacI family INR48_RS01865 PF17059 MgtA leader peptide INR48_RS01870 PF00690 Cation transporter/ATPase, N-terminus INR48_RS01870 PF00689 Cation transporting ATPase, C-terminus INR48_RS01875 PF01042 Endoribonuclease L-PSP INR48_RS01880 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain INR48_RS01880 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain INR48_RS01885 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain INR48_RS01885 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain INR48_RS01890 PF08052 PyrBI operon leader peptide INR48_RS01895 PF01042 Endoribonuclease L-PSP INR48_RS01905 PF00440 Bacterial regulatory proteins, tetR family INR48_RS01910 PF04074 YhcH/YjgK/YiaL INR48_RS01920 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain INR48_RS01920 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain INR48_RS01925 PF06877 Regulator of ribonuclease activity B INR48_RS01930 PF00583 Acetyltransferase (GNAT) family INR48_RS01935 PF05987 Bacterial protein of unknown function (DUF898) INR48_RS01940 PF00133 tRNA synthetases class I (I, L, M and V) INR48_RS01940 PF10458 Valyl tRNA synthetase tRNA binding arm INR48_RS01940 PF08264 Anticodon-binding domain of tRNA INR48_RS01945 PF04364 DNA polymerase III chi subunit, HolC INR48_RS01950 PF00883 Cytosol aminopeptidase family, catalytic domain INR48_RS01950 PF02789 Cytosol aminopeptidase family, N-terminal domain INR48_RS01955 PF03739 Lipopolysaccharide export system permease LptF/LptG INR48_RS01960 PF03739 Lipopolysaccharide export system permease LptF/LptG INR48_RS01965 PF05872 Bacterial protein of unknown function (DUF853) INR48_RS01970 PF00107 Zinc-binding dehydrogenase INR48_RS01970 PF08240 Alcohol dehydrogenase GroES-like domain INR48_RS01980 PF13356 Arm DNA-binding domain INR48_RS01980 PF00589 Phage integrase family INR48_RS02035 PF17345 Family of unknown function (DUF5375) INR48_RS02060 PF00075 RNase H INR48_RS02065 PF13091 PLD-like domain INR48_RS02065 PF13087 AAA domain INR48_RS02080 PF02384 N-6 DNA Methylase INR48_RS02085 PF02384 N-6 DNA Methylase INR48_RS02085 PF12161 HsdM N-terminal domain INR48_RS02090 PF01420 Type I restriction modification DNA specificity domain INR48_RS02095 PF18766 SWI2/SNF2 ATPase INR48_RS02095 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) INR48_RS02095 PF11867 Domain of unknown function (DUF3387) INR48_RS02100 PF01420 Type I restriction modification DNA specificity domain INR48_RS02110 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase INR48_RS02120 PF06178 Oligogalacturonate-specific porin protein (KdgM) INR48_RS02125 PF00589 Phage integrase family INR48_RS02130 PF00589 Phage integrase family INR48_RS02135 PF00419 Fimbrial protein INR48_RS02140 PF00419 Fimbrial protein INR48_RS02145 PF02753 Pili assembly chaperone PapD, C-terminal domain INR48_RS02145 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain INR48_RS02150 PF13954 PapC N-terminal domain INR48_RS02150 PF00577 Outer membrane usher protein INR48_RS02150 PF13953 PapC C-terminal domain INR48_RS02155 PF00419 Fimbrial protein INR48_RS02165 PF09160 FimH, mannose binding INR48_RS02165 PF00419 Fimbrial protein INR48_RS02170 PF02447 GntP family permease INR48_RS02175 PF03786 D-mannonate dehydratase (UxuA) INR48_RS02180 PF08125 Mannitol dehydrogenase C-terminal domain INR48_RS02180 PF01232 Mannitol dehydrogenase Rossmann domain INR48_RS02185 PF07729 FCD domain INR48_RS02185 PF00392 Bacterial regulatory proteins, gntR family INR48_RS02190 PF10887 Protein of unknown function (DUF2686) INR48_RS02200 PF04965 Gene 25-like lysozyme INR48_RS02205 PF03466 LysR substrate binding domain INR48_RS02205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS02210 PF01979 Amidohydrolase family INR48_RS02215 PF07670 Nucleoside recognition INR48_RS02220 PF07670 Nucleoside recognition INR48_RS02225 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family INR48_RS02230 PF02369 Bacterial Ig-like domain (group 1) INR48_RS02230 PF11924 Inverse autotransporter, beta-domain INR48_RS02230 PF09134 Invasin, domain 3 INR48_RS02235 PF06779 Uncharacterised MFS-type transporter YbfB INR48_RS02240 PF06977 SdiA-regulated INR48_RS02250 PF11823 Protein of unknown function (DUF3343) INR48_RS02255 PF01869 BadF/BadG/BcrA/BcrD ATPase family INR48_RS02260 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component INR48_RS02265 PF04286 Protein of unknown function (DUF445) INR48_RS02270 PF07690 Major Facilitator Superfamily INR48_RS02275 PF04754 Putative transposase, YhgA-like INR48_RS02280 PF00155 Aminotransferase class I and II INR48_RS02280 PF00392 Bacterial regulatory proteins, gntR family INR48_RS02285 PF06568 Domain of unknown function (DUF1127) INR48_RS02300 PF01420 Type I restriction modification DNA specificity domain INR48_RS02305 PF02384 N-6 DNA Methylase INR48_RS02325 PF02492 CobW/HypB/UreG, nucleotide-binding domain INR48_RS02325 PF07683 Cobalamin synthesis protein cobW C-terminal domain INR48_RS02330 PF04328 Selenoprotein, putative INR48_RS02335 PF02554 Carbon starvation protein CstA INR48_RS02335 PF13722 5TM C-terminal transporter carbon starvation CstA INR48_RS02340 PF01613 Flavin reductase like domain INR48_RS02345 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal INR48_RS02345 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal INR48_RS02350 PF12706 Beta-lactamase superfamily domain INR48_RS02355 PF12833 Helix-turn-helix domain INR48_RS02360 PF07690 Major Facilitator Superfamily INR48_RS02365 PF03328 HpcH/HpaI aldolase/citrate lyase family INR48_RS02370 PF01557 Fumarylacetoacetate (FAA) hydrolase family INR48_RS02375 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase INR48_RS02380 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase INR48_RS02385 PF00171 Aldehyde dehydrogenase family INR48_RS02390 PF01557 Fumarylacetoacetate (FAA) hydrolase family INR48_RS02395 PF01047 MarR family INR48_RS02400 PF00672 HAMP domain INR48_RS02400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INR48_RS02400 PF02203 Tar ligand binding domain homologue INR48_RS02405 PF07690 Major Facilitator Superfamily INR48_RS02410 PF07729 FCD domain INR48_RS02410 PF00392 Bacterial regulatory proteins, gntR family INR48_RS02415 PF00107 Zinc-binding dehydrogenase INR48_RS02415 PF08240 Alcohol dehydrogenase GroES-like domain INR48_RS02420 PF00884 Sulfatase INR48_RS02425 PF10696 Protein of unknown function (DUF2501) INR48_RS02430 PF01695 IstB-like ATP binding protein INR48_RS02435 PF17948 DnaT DNA-binding domain INR48_RS02440 PF12821 Threonine/Serine exporter, ThrE INR48_RS02445 PF06738 Putative threonine/serine exporter INR48_RS02450 PF00196 Bacterial regulatory proteins, luxR family INR48_RS02455 PF00196 Bacterial regulatory proteins, luxR family INR48_RS02460 PF11575 FhuF 2Fe-2S C-terminal domain INR48_RS02460 PF06276 Ferric iron reductase FhuF-like transporter INR48_RS02465 PF07256 Protein of unknown function (DUF1435) INR48_RS02485 PF08468 Methyltransferase small domain N-terminal INR48_RS02485 PF05175 Methyltransferase small domain INR48_RS02490 PF03603 DNA polymerase III psi subunit INR48_RS02495 PF00583 Acetyltransferase (GNAT) family INR48_RS02500 PF13419 Haloacid dehalogenase-like hydrolase INR48_RS02505 PF16658 Class II release factor RF3, C-terminal domain INR48_RS02505 PF00009 Elongation factor Tu GTP binding domain INR48_RS02505 PF03144 Elongation factor Tu domain 2 INR48_RS02510 PF04972 BON domain INR48_RS02515 PF07043 Protein of unknown function (DUF1328) INR48_RS02520 PF01734 Patatin-like phospholipase INR48_RS02525 PF01026 TatD related DNase INR48_RS02530 PF04055 Radical SAM superfamily INR48_RS02535 PF11230 Protein of unknown function (DUF3029) INR48_RS02540 PF01791 DeoC/LacD family aldolase INR48_RS02545 PF00591 Glycosyl transferase family, a/b domain INR48_RS02545 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain INR48_RS02545 PF02885 Glycosyl transferase family, helical bundle domain INR48_RS02550 PF01676 Metalloenzyme superfamily INR48_RS02555 PF01048 Phosphorylase superfamily INR48_RS02565 PF03099 Biotin/lipoate A/B protein ligase family INR48_RS02565 PF10437 Bacterial lipoate protein ligase C-terminus INR48_RS02570 PF10144 Bacterial virulence factor haemolysin INR48_RS02575 PF18429 Domain of unknown function (DUF5609) INR48_RS02580 PF18073 Rubredoxin metal binding domain INR48_RS02585 PF13521 AAA domain INR48_RS02585 PF01381 Helix-turn-helix INR48_RS02590 PF00724 NADH:flavin oxidoreductase / NADH oxidase family INR48_RS02605 PF00106 short chain dehydrogenase INR48_RS02610 PF00248 Aldo/keto reductase family INR48_RS02615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS02615 PF03466 LysR substrate binding domain INR48_RS02620 PF00005 ABC transporter INR48_RS02620 PF12848 ABC transporter INR48_RS02625 PF01464 Transglycosylase SLT domain INR48_RS02625 PF14718 Soluble lytic murein transglycosylase L domain INR48_RS02630 PF01371 Trp repressor protein INR48_RS02635 PF01931 Protein of unknown function DUF84 INR48_RS02640 PF00300 Histidine phosphatase superfamily (branch 1) INR48_RS02645 PF12833 Helix-turn-helix domain INR48_RS02645 PF06445 GyrI-like small molecule binding domain INR48_RS02650 PF05981 CreA protein INR48_RS02655 PF00072 Response regulator receiver domain INR48_RS02655 PF00486 Transcriptional regulatory protein, C terminal INR48_RS02660 PF00672 HAMP domain INR48_RS02660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS02660 PF00512 His Kinase A (phospho-acceptor) domain INR48_RS02665 PF06123 Inner membrane protein CreD INR48_RS02670 PF00072 Response regulator receiver domain INR48_RS02670 PF00486 Transcriptional regulatory protein, C terminal INR48_RS02680 PF00588 SpoU rRNA Methylase family INR48_RS02685 PF08254 Threonine leader peptide INR48_RS02690 PF01842 ACT domain INR48_RS02690 PF00696 Amino acid kinase family INR48_RS02690 PF13840 ACT domain INR48_RS02690 PF03447 Homoserine dehydrogenase, NAD binding domain INR48_RS02690 PF00742 Homoserine dehydrogenase INR48_RS02695 PF00288 GHMP kinases N terminal domain INR48_RS02695 PF08544 GHMP kinases C terminal INR48_RS02700 PF14821 Threonine synthase N terminus INR48_RS02700 PF00291 Pyridoxal-phosphate dependent enzyme INR48_RS02705 PF10697 Protein of unknown function (DUF2502) INR48_RS02710 PF03883 Peroxide stress protein YaaA INR48_RS02715 PF01235 Sodium:alanine symporter family INR48_RS02720 PF00923 Transaldolase/Fructose-6-phosphate aldolase INR48_RS02725 PF00994 Probable molybdopterin binding domain INR48_RS02730 PF01184 GPR1/FUN34/yaaH family INR48_RS02735 PF13099 Domain of unknown function (DUF3944) INR48_RS02735 PF03981 Ubiquinol-cytochrome C chaperone INR48_RS02740 PF10807 Protein of unknown function (DUF2541) INR48_RS02745 PF00012 Hsp70 protein INR48_RS02750 PF00684 DnaJ central domain INR48_RS02750 PF01556 DnaJ C terminal domain INR48_RS02750 PF00226 DnaJ domain INR48_RS02755 PF01848 Hok/gef family INR48_RS02760 PF06965 Na+/H+ antiporter 1 INR48_RS02765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS02765 PF03466 LysR substrate binding domain INR48_RS02775 PF13954 PapC N-terminal domain INR48_RS02775 PF13953 PapC C-terminal domain INR48_RS02775 PF00577 Outer membrane usher protein INR48_RS02780 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain INR48_RS02780 PF02753 Pili assembly chaperone PapD, C-terminal domain INR48_RS02795 PF01649 Ribosomal protein S20 INR48_RS02800 PF10837 Protein of unknown function (DUF2575) INR48_RS02805 PF01687 Riboflavin kinase INR48_RS02805 PF06574 FAD synthetase INR48_RS02810 PF06827 Zinc finger found in FPG and IleRS INR48_RS02810 PF08264 Anticodon-binding domain of tRNA INR48_RS02810 PF00133 tRNA synthetases class I (I, L, M and V) INR48_RS02815 PF01252 Signal peptidase (SPase) II INR48_RS02820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase INR48_RS02825 PF02401 LytB protein INR48_RS02830 PF01156 Inosine-uridine preferring nucleoside hydrolase INR48_RS02835 PF05173 Dihydrodipicolinate reductase, C-terminus INR48_RS02835 PF01113 Dihydrodipicolinate reductase, N-terminus INR48_RS02840 PF00117 Glutamine amidotransferase class-I INR48_RS02840 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain INR48_RS02845 PF02142 MGS-like domain INR48_RS02845 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain INR48_RS02845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain INR48_RS02850 PF07180 CaiF/GrlA transcriptional regulator INR48_RS02855 PF00132 Bacterial transferase hexapeptide (six repeats) INR48_RS02860 PF00378 Enoyl-CoA hydratase/isomerase INR48_RS02865 PF00501 AMP-binding enzyme INR48_RS02865 PF13193 AMP-binding enzyme C-terminal domain INR48_RS02870 PF02515 CoA-transferase family III INR48_RS02875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INR48_RS02875 PF02770 Acyl-CoA dehydrogenase, middle domain INR48_RS02875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INR48_RS02880 PF02028 BCCT, betaine/carnitine/choline family transporter INR48_RS02885 PF01012 Electron transfer flavoprotein domain INR48_RS02890 PF00766 Electron transfer flavoprotein FAD-binding domain INR48_RS02890 PF01012 Electron transfer flavoprotein domain INR48_RS02895 PF01494 FAD binding domain INR48_RS02905 PF00083 Sugar (and other) transporter INR48_RS02910 PF02525 Flavodoxin-like fold INR48_RS02915 PF02254 TrkA-N domain INR48_RS02915 PF00999 Sodium/hydrogen exchanger family INR48_RS02920 PF00186 Dihydrofolate reductase INR48_RS02925 PF00149 Calcineurin-like phosphoesterase INR48_RS02930 PF04379 ApaG domain INR48_RS02935 PF00398 Ribosomal RNA adenine dimethylase INR48_RS02940 PF04166 Pyridoxal phosphate biosynthetic protein PdxA INR48_RS02945 PF00639 PPIC-type PPIASE domain INR48_RS02945 PF09312 SurA N-terminal domain INR48_RS02950 PF03968 OstA-like protein INR48_RS02950 PF04453 LPS transport system D INR48_RS02955 PF05099 Tellurite resistance protein TerB INR48_RS02955 PF00226 DnaJ domain INR48_RS02970 PF00849 RNA pseudouridylate synthase INR48_RS02975 PF12137 RNA polymerase recycling family C-terminal INR48_RS02975 PF00271 Helicase conserved C-terminal domain INR48_RS02975 PF00176 SNF2 family N-terminal domain INR48_RS02975 PF18337 RapA N-terminal Tudor like domain INR48_RS02975 PF18339 RapA N-terminal Tudor like domain 1 INR48_RS02980 PF03104 DNA polymerase family B, exonuclease domain INR48_RS02980 PF00136 DNA polymerase family B INR48_RS02985 PF00596 Class II Aldolase and Adducin N-terminal domain INR48_RS02990 PF02610 L-arabinose isomerase INR48_RS02990 PF11762 L-arabinose isomerase C-terminal domain INR48_RS02995 PF02782 FGGY family of carbohydrate kinases, C-terminal domain INR48_RS03000 PF02311 AraC-like ligand binding domain INR48_RS03000 PF12833 Helix-turn-helix domain INR48_RS03005 PF09335 SNARE associated Golgi protein INR48_RS03010 PF00005 ABC transporter INR48_RS03015 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS03030 PF12793 Sugar transport-related sRNA regulator N-term INR48_RS03030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INR48_RS03040 PF00694 Aconitase C-terminal domain INR48_RS03045 PF00330 Aconitase family (aconitate hydratase) INR48_RS03050 PF00180 Isocitrate/isopropylmalate dehydrogenase INR48_RS03055 PF00682 HMGL-like INR48_RS03055 PF08502 LeuA allosteric (dimerisation) domain INR48_RS03060 PF08054 Leucine operon leader peptide INR48_RS03065 PF03466 LysR substrate binding domain INR48_RS03065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS03075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INR48_RS03075 PF00205 Thiamine pyrophosphate enzyme, central domain INR48_RS03075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INR48_RS03080 PF10369 Small subunit of acetolactate synthase INR48_RS03090 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family INR48_RS03090 PF00356 Bacterial regulatory proteins, lacI family INR48_RS03095 PF02381 MraZ protein, putative antitoxin-like INR48_RS03100 PF01795 MraW methylase family INR48_RS03105 PF04999 Cell division protein FtsL INR48_RS03110 PF00905 Penicillin binding protein transpeptidase domain INR48_RS03110 PF03717 Penicillin-binding Protein dimerisation domain INR48_RS03115 PF08245 Mur ligase middle domain INR48_RS03115 PF02875 Mur ligase family, glutamate ligase domain INR48_RS03115 PF01225 Mur ligase family, catalytic domain INR48_RS03120 PF01225 Mur ligase family, catalytic domain INR48_RS03120 PF02875 Mur ligase family, glutamate ligase domain INR48_RS03120 PF08245 Mur ligase middle domain INR48_RS03125 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 INR48_RS03125 PF00953 Glycosyl transferase family 4 INR48_RS03130 PF08245 Mur ligase middle domain INR48_RS03130 PF02875 Mur ligase family, glutamate ligase domain INR48_RS03135 PF01098 Cell cycle protein INR48_RS03140 PF03033 Glycosyltransferase family 28 N-terminal domain INR48_RS03140 PF04101 Glycosyltransferase family 28 C-terminal domain INR48_RS03145 PF02875 Mur ligase family, glutamate ligase domain INR48_RS03145 PF08245 Mur ligase middle domain INR48_RS03145 PF01225 Mur ligase family, catalytic domain INR48_RS03150 PF07478 D-ala D-ala ligase C-terminus INR48_RS03150 PF01820 D-ala D-ala ligase N-terminus INR48_RS03155 PF03799 Cell division protein FtsQ INR48_RS03155 PF08478 POTRA domain, FtsQ-type INR48_RS03160 PF02491 SHS2 domain inserted in FTSA INR48_RS03165 PF00091 Tubulin/FtsZ family, GTPase domain INR48_RS03165 PF12327 FtsZ family, C-terminal domain INR48_RS03170 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase INR48_RS03175 PF06558 Secretion monitor precursor protein (SecM) INR48_RS03180 PF07517 SecA DEAD-like domain INR48_RS03180 PF01043 SecA preprotein cross-linking domain INR48_RS03180 PF07516 SecA Wing and Scaffold domain INR48_RS03180 PF02810 SEC-C motif INR48_RS03185 PF00293 NUDIX domain INR48_RS03190 PF03884 DNA gyrase inhibitor YacG INR48_RS03195 PF07072 Cell division protein INR48_RS03200 PF01121 Dephospho-CoA kinase INR48_RS03210 PF00478 IMP dehydrogenase / GMP reductase domain INR48_RS03215 PF00482 Type II secretion system (T2SS), protein F INR48_RS03220 PF00437 Type II/IV secretion system protein INR48_RS03220 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain INR48_RS03225 PF07963 Prokaryotic N-terminal methylation motif INR48_RS03230 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain INR48_RS03230 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain INR48_RS03235 PF01510 N-acetylmuramoyl-L-alanine amidase INR48_RS03240 PF17113 Regulatory signalling modulator protein AmpE INR48_RS03245 PF00324 Amino acid permease INR48_RS03250 PF07729 FCD domain INR48_RS03250 PF00392 Bacterial regulatory proteins, gntR family INR48_RS03255 PF00456 Transketolase, thiamine diphosphate binding domain INR48_RS03255 PF17831 Pyruvate dehydrogenase E1 component middle domain INR48_RS03260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) INR48_RS03260 PF02817 e3 binding domain INR48_RS03260 PF00364 Biotin-requiring enzyme INR48_RS03265 PF07992 Pyridine nucleotide-disulphide oxidoreductase INR48_RS03265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain INR48_RS03270 PF11737 Protein of unknown function (DUF3300) INR48_RS03275 PF06434 Aconitate hydratase 2 N-terminus INR48_RS03275 PF00330 Aconitase family (aconitate hydratase) INR48_RS03275 PF11791 Aconitate B N-terminal domain INR48_RS03280 PF06062 Uncharacterised protein family (UPF0231) INR48_RS03285 PF02675 S-adenosylmethionine decarboxylase INR48_RS03290 PF17284 Spermidine synthase tetramerisation domain INR48_RS03295 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) INR48_RS03300 PF00394 Multicopper oxidase INR48_RS03300 PF07731 Multicopper oxidase INR48_RS03300 PF07732 Multicopper oxidase INR48_RS03305 PF01011 PQQ enzyme repeat INR48_RS03310 PF00156 Phosphoribosyl transferase domain INR48_RS03315 PF00484 Carbonic anhydrase INR48_RS03320 PF00005 ABC transporter INR48_RS03325 PF01061 ABC-2 type transporter INR48_RS03330 PF03610 PTS system fructose IIA component INR48_RS03335 PF01522 Polysaccharide deacetylase INR48_RS03340 PF02261 Aspartate decarboxylase INR48_RS03345 PF04754 Putative transposase, YhgA-like INR48_RS03350 PF02569 Pantoate-beta-alanine ligase INR48_RS03355 PF02548 Ketopantoate hydroxymethyltransferase INR48_RS03360 PF00419 Fimbrial protein INR48_RS03365 PF00419 Fimbrial protein INR48_RS03370 PF00419 Fimbrial protein INR48_RS03375 PF00577 Outer membrane usher protein INR48_RS03375 PF13954 PapC N-terminal domain INR48_RS03375 PF13953 PapC C-terminal domain INR48_RS03380 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain INR48_RS03380 PF02753 Pili assembly chaperone PapD, C-terminal domain INR48_RS03385 PF00419 Fimbrial protein INR48_RS03390 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) INR48_RS03395 PF12626 Polymerase A arginine-rich C-terminus INR48_RS03395 PF01743 Poly A polymerase head domain INR48_RS03395 PF12627 Probable RNA and SrmB- binding site of polymerase A INR48_RS03400 PF00749 tRNA synthetases class I (E and Q), catalytic domain INR48_RS03405 PF01258 Prokaryotic dksA/traR C4-type zinc finger INR48_RS03410 PF03749 Sugar fermentation stimulation protein RE domain INR48_RS03410 PF17746 SfsA N-terminal OB domain INR48_RS03415 PF02834 LigT like Phosphoesterase INR48_RS03420 PF04408 Helicase associated domain (HA2) INR48_RS03420 PF00270 DEAD/DEAH box helicase INR48_RS03420 PF08482 ATP-dependent helicase C-terminal INR48_RS03420 PF00271 Helicase conserved C-terminal domain INR48_RS03425 PF00912 Transglycosylase INR48_RS03425 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal INR48_RS03425 PF00905 Penicillin binding protein transpeptidase domain INR48_RS03425 PF14814 Bifunctional transglycosylase second domain INR48_RS03430 PF00593 TonB dependent receptor INR48_RS03430 PF07715 TonB-dependent Receptor Plug Domain INR48_RS03435 PF00005 ABC transporter INR48_RS03440 PF01497 Periplasmic binding protein INR48_RS03445 PF01032 FecCD transport family INR48_RS03450 PF00202 Aminotransferase class-III INR48_RS03455 PF00654 Voltage gated chloride channel INR48_RS03465 PF01521 Iron-sulphur cluster biosynthesis INR48_RS03470 PF03458 UPF0126 domain INR48_RS03475 PF01497 Periplasmic binding protein INR48_RS03480 PF01048 Phosphorylase superfamily INR48_RS03485 PF01966 HD domain INR48_RS03490 PF00595 PDZ domain INR48_RS03495 PF13556 PucR C-terminal helix-turn-helix domain INR48_RS03495 PF17853 GGDEF-like domain INR48_RS03495 PF05651 Putative sugar diacid recognition INR48_RS03500 PF11944 Protein of unknown function (DUF3461) INR48_RS03505 PF14602 Hexapeptide repeat of succinyl-transferase INR48_RS03505 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal INR48_RS03505 PF00132 Bacterial transferase hexapeptide (six repeats) INR48_RS03510 PF01909 Nucleotidyltransferase domain INR48_RS03510 PF01966 HD domain INR48_RS03510 PF08335 GlnD PII-uridylyltransferase INR48_RS03510 PF01842 ACT domain INR48_RS03515 PF00557 Metallopeptidase family M24 INR48_RS03520 PF00318 Ribosomal protein S2 INR48_RS03525 PF00889 Elongation factor TS INR48_RS03530 PF00696 Amino acid kinase family INR48_RS03535 PF01765 Ribosome recycling factor INR48_RS03540 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain INR48_RS03540 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase INR48_RS03540 PF13288 DXP reductoisomerase C-terminal domain INR48_RS03545 PF01255 Putative undecaprenyl diphosphate synthase INR48_RS03555 PF17820 PDZ domain INR48_RS03555 PF02163 Peptidase family M50 INR48_RS03560 PF01103 Surface antigen INR48_RS03560 PF07244 Surface antigen variable number repeat INR48_RS03565 PF03938 Outer membrane protein (OmpH-like) INR48_RS03570 PF00132 Bacterial transferase hexapeptide (six repeats) INR48_RS03570 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD INR48_RS03575 PF07977 FabA-like domain INR48_RS03580 PF00132 Bacterial transferase hexapeptide (six repeats) INR48_RS03580 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 INR48_RS03585 PF02684 Lipid-A-disaccharide synthetase INR48_RS03590 PF01351 Ribonuclease HII INR48_RS03595 PF02811 PHP domain INR48_RS03595 PF14579 Helix-hairpin-helix motif INR48_RS03595 PF17657 Bacterial DNA polymerase III alpha subunit finger domain INR48_RS03595 PF07733 Bacterial DNA polymerase III alpha NTPase domain INR48_RS03595 PF01336 OB-fold nucleic acid binding domain INR48_RS03600 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit INR48_RS03605 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain INR48_RS03605 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain INR48_RS03605 PF01276 Orn/Lys/Arg decarboxylase, major domain INR48_RS03610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily INR48_RS03615 PF01171 PP-loop family INR48_RS03615 PF09179 TilS substrate binding domain INR48_RS03615 PF11734 TilS substrate C-terminal domain INR48_RS03620 PF07073 Modulator of Rho-dependent transcription termination (ROF) INR48_RS03625 PF06786 Uncharacterised protein family (UPF0253) INR48_RS03630 PF07152 YaeQ protein INR48_RS03635 PF00472 RF-1 domain INR48_RS03640 PF04170 NlpE N-terminal domain INR48_RS03640 PF17185 NlpE C-terminal OB domain INR48_RS03645 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family INR48_RS03650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) INR48_RS03650 PF04073 Aminoacyl-tRNA editing domain INR48_RS03650 PF03129 Anticodon binding domain INR48_RS03655 PF01980 tRNA-methyltransferase O INR48_RS03655 PF18389 TrmO C-terminal domain INR48_RS03660 PF16358 RcsF lipoprotein INR48_RS03665 PF03180 NLPA lipoprotein INR48_RS03670 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS03675 PF09383 NIL domain INR48_RS03675 PF00005 ABC transporter INR48_RS03715 PF00248 Aldo/keto reductase family INR48_RS03720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS03720 PF03466 LysR substrate binding domain INR48_RS03725 PF03372 Endonuclease/Exonuclease/phosphatase family INR48_RS03730 PF08241 Methyltransferase domain INR48_RS03735 PF01476 LysM domain INR48_RS03735 PF01464 Transglycosylase SLT domain INR48_RS03740 PF16123 Hydroxyacylglutathione hydrolase C-terminus INR48_RS03740 PF00753 Metallo-beta-lactamase superfamily INR48_RS03745 PF08241 Methyltransferase domain INR48_RS03750 PF00075 RNase H INR48_RS03755 PF00929 Exonuclease INR48_RS03780 PF14331 ImcF-related N-terminal domain INR48_RS03780 PF06761 Intracellular multiplication and human macrophage-killing INR48_RS03780 PF06744 Type VI secretion protein IcmF C-terminal INR48_RS03795 PF07724 AAA domain (Cdc48 subfamily) INR48_RS03795 PF17871 AAA lid domain INR48_RS03795 PF00004 ATPase family associated with various cellular activities (AAA) INR48_RS03795 PF10431 C-terminal, D2-small domain, of ClpB protein INR48_RS03805 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE INR48_RS03835 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath INR48_RS03845 PF05638 Type VI secretion system effector, Hcp INR48_RS03880 PF13808 DDE_Tnp_1-associated INR48_RS03880 PF01609 Transposase DDE domain INR48_RS03885 PF01348 Type II intron maturase INR48_RS03885 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) INR48_RS03895 PF13808 DDE_Tnp_1-associated INR48_RS03895 PF01609 Transposase DDE domain INR48_RS03910 PF00795 Carbon-nitrogen hydrolase INR48_RS03920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INR48_RS03920 PF02770 Acyl-CoA dehydrogenase, middle domain INR48_RS03920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INR48_RS03920 PF09317 Domain of unknown function (DUF1974) INR48_RS03925 PF13580 SIS domain INR48_RS03930 PF13230 Glutamine amidotransferases class-II INR48_RS03935 PF03734 L,D-transpeptidase catalytic domain INR48_RS03940 PF00877 NlpC/P60 family INR48_RS03950 PF00771 FHIPEP family INR48_RS03955 PF13677 Membrane MotB of proton-channel complex MotA/MotB INR48_RS03955 PF00691 OmpA family INR48_RS03960 PF11798 IMS family HHH motif INR48_RS03960 PF11799 impB/mucB/samB family C-terminal domain INR48_RS03960 PF00817 impB/mucB/samB family INR48_RS03975 PF13673 Acetyltransferase (GNAT) domain INR48_RS03985 PF00472 RF-1 domain INR48_RS04000 PF01546 Peptidase family M20/M25/M40 INR48_RS04000 PF07687 Peptidase dimerisation domain INR48_RS04005 PF00156 Phosphoribosyl transferase domain INR48_RS04010 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) INR48_RS04015 PF07417 Sigma factor-binding transcriptional regulator Crl INR48_RS04020 PF00267 Gram-negative porin INR48_RS04025 PF01472 PUA domain INR48_RS04025 PF00696 Amino acid kinase family INR48_RS04030 PF00171 Aldehyde dehydrogenase family INR48_RS04045 PF03466 LysR substrate binding domain INR48_RS04045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS04050 PF02129 X-Pro dipeptidyl-peptidase (S15 family) INR48_RS04055 PF07690 Major Facilitator Superfamily INR48_RS04060 PF02625 XdhC and CoxI family INR48_RS04060 PF13478 XdhC Rossmann domain INR48_RS04065 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase INR48_RS04065 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain INR48_RS04070 PF03450 CO dehydrogenase flavoprotein C-terminal domain INR48_RS04070 PF00941 FAD binding domain in molybdopterin dehydrogenase INR48_RS04085 PF01799 [2Fe-2S] binding domain INR48_RS04085 PF00111 2Fe-2S iron-sulfur cluster binding domain INR48_RS04090 PF07274 Protein of unknown function (DUF1440) INR48_RS04095 PF03692 Putative zinc- or iron-chelating domain INR48_RS04110 PF16967 E-set like domain INR48_RS04110 PF15976 CS1-pili formation C-terminal INR48_RS04115 PF18649 EcpB C-terminal domain INR48_RS04120 PF16449 Fimbrillin MatB INR48_RS04125 PF00196 Bacterial regulatory proteins, luxR family INR48_RS04135 PF00444 Ribosomal protein L36 INR48_RS04140 PF01197 Ribosomal protein L31 INR48_RS04150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family INR48_RS04155 PF12146 Serine aminopeptidase, S33 INR48_RS04160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS04160 PF03466 LysR substrate binding domain INR48_RS04165 PF03466 LysR substrate binding domain INR48_RS04165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS04170 PF00248 Aldo/keto reductase family INR48_RS04175 PF00248 Aldo/keto reductase family INR48_RS04180 PF11924 Inverse autotransporter, beta-domain INR48_RS04185 PF12833 Helix-turn-helix domain INR48_RS04190 PF00248 Aldo/keto reductase family INR48_RS04195 PF04224 Protein of unknown function, DUF417 INR48_RS04200 PF07338 Protein of unknown function (DUF1471) INR48_RS04205 PF07992 Pyridine nucleotide-disulphide oxidoreductase INR48_RS04205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain INR48_RS04210 PF12833 Helix-turn-helix domain INR48_RS04210 PF12852 Cupin INR48_RS04215 PF02754 Cysteine-rich domain INR48_RS04220 PF02589 LUD domain INR48_RS04220 PF11870 Domain of unknown function (DUF3390) INR48_RS04220 PF13183 4Fe-4S dicluster domain INR48_RS04225 PF02589 LUD domain INR48_RS04235 PF05199 GMC oxidoreductase INR48_RS04235 PF00732 GMC oxidoreductase INR48_RS04240 PF00171 Aldehyde dehydrogenase family INR48_RS04245 PF13977 BetI-type transcriptional repressor, C-terminal INR48_RS04245 PF00440 Bacterial regulatory proteins, tetR family INR48_RS04250 PF02028 BCCT, betaine/carnitine/choline family transporter INR48_RS04255 PF00563 EAL domain INR48_RS04255 PF00196 Bacterial regulatory proteins, luxR family INR48_RS04260 PF03466 LysR substrate binding domain INR48_RS04260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS04265 PF06496 Protein of unknown function (DUF1097) INR48_RS04270 PF12796 Ankyrin repeats (3 copies) INR48_RS04275 PF11392 Protein of unknown function (DUF2877) INR48_RS04280 PF00549 CoA-ligase INR48_RS04280 PF02629 CoA binding domain INR48_RS04285 PF06545 Protein of unknown function (DUF1116) INR48_RS04290 PF00696 Amino acid kinase family INR48_RS04295 PF07969 Amidohydrolase family INR48_RS04305 PF00107 Zinc-binding dehydrogenase INR48_RS04305 PF08240 Alcohol dehydrogenase GroES-like domain INR48_RS04320 PF01810 LysE type translocator INR48_RS04325 PF07338 Protein of unknown function (DUF1471) INR48_RS04330 PF00158 Sigma-54 interaction domain INR48_RS04330 PF02954 Bacterial regulatory protein, Fis family INR48_RS04330 PF06506 Propionate catabolism activator INR48_RS04340 PF00285 Citrate synthase, C-terminal domain INR48_RS04345 PF03972 MmgE/PrpD family INR48_RS04350 PF00501 AMP-binding enzyme INR48_RS04350 PF16177 Acetyl-coenzyme A synthetase N-terminus INR48_RS04350 PF13193 AMP-binding enzyme C-terminal domain INR48_RS04355 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin INR48_RS04360 PF07969 Amidohydrolase family INR48_RS04365 PF03466 LysR substrate binding domain INR48_RS04365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS04370 PF00484 Carbonic anhydrase INR48_RS04375 PF02560 Cyanate lyase C-terminal domain INR48_RS04380 PF07690 Major Facilitator Superfamily INR48_RS04385 PF12464 Maltose acetyltransferase INR48_RS04385 PF00132 Bacterial transferase hexapeptide (six repeats) INR48_RS04390 PF01306 LacY proton/sugar symporter INR48_RS04395 PF00703 Glycosyl hydrolases family 2 INR48_RS04395 PF02836 Glycosyl hydrolases family 2, TIM barrel domain INR48_RS04395 PF02837 Glycosyl hydrolases family 2, sugar binding domain INR48_RS04395 PF02929 Beta galactosidase small chain INR48_RS04395 PF16353 Domain of unknown function(DUF4981) INR48_RS04400 PF00356 Bacterial regulatory proteins, lacI family INR48_RS04405 PF01614 Bacterial transcriptional regulator INR48_RS04405 PF09339 IclR helix-turn-helix domain INR48_RS04410 PF01494 FAD binding domain INR48_RS04415 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase INR48_RS04420 PF12697 Alpha/beta hydrolase family INR48_RS04425 PF01557 Fumarylacetoacetate (FAA) hydrolase family INR48_RS04430 PF01118 Semialdehyde dehydrogenase, NAD binding domain INR48_RS04430 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation INR48_RS04435 PF07836 DmpG-like communication domain INR48_RS04435 PF00682 HMGL-like INR48_RS04440 PF07690 Major Facilitator Superfamily INR48_RS04445 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) INR48_RS04450 PF00756 Putative esterase INR48_RS04455 PF08240 Alcohol dehydrogenase GroES-like domain INR48_RS04455 PF00107 Zinc-binding dehydrogenase INR48_RS04460 PF02583 Metal-sensitive transcriptional repressor INR48_RS04470 PF00132 Bacterial transferase hexapeptide (six repeats) INR48_RS04475 PF00535 Glycosyl transferase family 2 INR48_RS04480 PF02585 GlcNAc-PI de-N-acetylase INR48_RS04485 PF04069 Substrate binding domain of ABC-type glycine betaine transport system INR48_RS04490 PF00005 ABC transporter INR48_RS04495 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS04500 PF02668 Taurine catabolism dioxygenase TauD, TfdA family INR48_RS04505 PF00490 Delta-aminolevulinic acid dehydratase INR48_RS04510 PF03212 Pertactin INR48_RS04510 PF03797 Autotransporter beta-domain INR48_RS04515 PF15977 Winged helix-turn-helix DNA binding INR48_RS04520 PF00144 Beta-lactamase INR48_RS04525 PF05992 SbmA/BacA-like family INR48_RS04530 PF07759 Protein of unknown function (DUF1615) INR48_RS04535 PF10954 Protein of unknown function (DUF2755) INR48_RS04540 PF10953 Protein of unknown function (DUF2754) INR48_RS04545 PF07478 D-ala D-ala ligase C-terminus INR48_RS04545 PF01820 D-ala D-ala ligase N-terminus INR48_RS04555 PF10796 Sigma-S stabilisation anti-adaptor protein INR48_RS04560 PF00245 Alkaline phosphatase INR48_RS04565 PF07769 psiF repeat INR48_RS04570 PF00990 Diguanylate cyclase, GGDEF domain INR48_RS04570 PF05230 MASE2 domain INR48_RS04575 PF14748 Pyrroline-5-carboxylate reductase dimerisation INR48_RS04575 PF03807 NADP oxidoreductase coenzyme F420-dependent INR48_RS04580 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 INR48_RS04585 PF01202 Shikimate kinase INR48_RS04590 PF16362 YaiA protein INR48_RS04595 PF07302 AroM protein INR48_RS04600 PF06865 Pyrimidine/purine nucleoside phosphorylase INR48_RS04615 PF04381 Putative exonuclease, RdgC INR48_RS04620 PF00480 ROK family INR48_RS04625 PF07690 Major Facilitator Superfamily INR48_RS04630 PF13476 AAA domain INR48_RS04635 PF00149 Calcineurin-like phosphoesterase INR48_RS04635 PF12320 Type 5 capsule protein repressor C-terminal domain INR48_RS04640 PF00486 Transcriptional regulatory protein, C terminal INR48_RS04640 PF00072 Response regulator receiver domain INR48_RS04645 PF00512 His Kinase A (phospho-acceptor) domain INR48_RS04645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS04645 PF11808 Phosphate regulon sensor protein PhoR INR48_RS04645 PF00989 PAS fold INR48_RS04650 PF05525 Branched-chain amino acid transport protein INR48_RS04655 PF00324 Amino acid permease INR48_RS04660 PF00128 Alpha amylase, catalytic domain INR48_RS04660 PF02903 Alpha amylase, N-terminal ig-like domain INR48_RS04670 PF04336 Acyl carrier protein phosphodiesterase INR48_RS04675 PF02547 Queuosine biosynthesis protein INR48_RS04680 PF01702 Queuine tRNA-ribosyltransferase INR48_RS04685 PF02699 Preprotein translocase subunit INR48_RS04690 PF07549 SecD/SecF GG Motif INR48_RS04690 PF13721 SecD export protein N-terminal TM region INR48_RS04690 PF02355 Protein export membrane protein INR48_RS04695 PF07549 SecD/SecF GG Motif INR48_RS04695 PF02355 Protein export membrane protein INR48_RS04700 PF01844 HNH endonuclease INR48_RS04705 PF03502 Nucleoside-specific channel-forming protein, Tsx INR48_RS04710 PF11622 Protein of unknown function (DUF3251) INR48_RS04715 PF03477 ATP cone domain INR48_RS04720 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region INR48_RS04720 PF01872 RibD C-terminal domain INR48_RS04725 PF00885 6,7-dimethyl-8-ribityllumazine synthase INR48_RS04730 PF01029 NusB family INR48_RS04735 PF00586 AIR synthase related protein, N-terminal domain INR48_RS04735 PF02769 AIR synthase related protein, C-terminal domain INR48_RS04740 PF04608 Phosphatidylglycerophosphatase A INR48_RS04750 PF00248 Aldo/keto reductase family INR48_RS04755 PF13292 1-deoxy-D-xylulose-5-phosphate synthase INR48_RS04755 PF02780 Transketolase, C-terminal domain INR48_RS04755 PF02779 Transketolase, pyrimidine binding domain INR48_RS04760 PF00348 Polyprenyl synthetase INR48_RS04765 PF02609 Exonuclease VII small subunit INR48_RS04770 PF02568 Thiamine biosynthesis protein (ThiI) INR48_RS04770 PF02926 THUMP domain INR48_RS04775 PF01965 DJ-1/PfpI family INR48_RS04780 PF02558 Ketopantoate reductase PanE/ApbA INR48_RS04780 PF08546 Ketopantoate reductase PanE/ApbA C terminal INR48_RS04785 PF04461 Protein of unknown function (DUF520) INR48_RS04790 PF07690 Major Facilitator Superfamily INR48_RS04795 PF01040 UbiA prenyltransferase family INR48_RS04800 PF03626 Prokaryotic Cytochrome C oxidase subunit IV INR48_RS04805 PF00510 Cytochrome c oxidase subunit III INR48_RS04810 PF00115 Cytochrome C and Quinol oxidase polypeptide I INR48_RS04815 PF06481 COX Aromatic Rich Motif INR48_RS04815 PF00116 Cytochrome C oxidase subunit II, periplasmic domain INR48_RS04820 PF07690 Major Facilitator Superfamily INR48_RS04825 PF08139 Prokaryotic membrane lipoprotein lipid attachment site INR48_RS04825 PF03923 Uncharacterized lipoprotein INR48_RS04830 PF01722 BolA-like protein INR48_RS04835 PF05698 Bacterial trigger factor protein (TF) C-terminus INR48_RS04835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase INR48_RS04835 PF05697 Bacterial trigger factor protein (TF) INR48_RS04840 PF00574 Clp protease INR48_RS04845 PF10431 C-terminal, D2-small domain, of ClpB protein INR48_RS04845 PF07724 AAA domain (Cdc48 subfamily) INR48_RS04845 PF06689 ClpX C4-type zinc finger INR48_RS04850 PF00004 ATPase family associated with various cellular activities (AAA) INR48_RS04850 PF05362 Lon protease (S16) C-terminal proteolytic domain INR48_RS04850 PF02190 ATP-dependent protease La (LON) substrate-binding domain INR48_RS04855 PF00216 Bacterial DNA-binding protein INR48_RS04860 PF13145 PPIC-type PPIASE domain INR48_RS04875 PF06508 Queuosine biosynthesis protein QueC INR48_RS04880 PF12793 Sugar transport-related sRNA regulator N-term INR48_RS04880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INR48_RS04890 PF13404 AsnC-type helix-turn-helix domain INR48_RS04890 PF01037 Lrp/AsnC ligand binding domain INR48_RS04895 PF00664 ABC transporter transmembrane region INR48_RS04895 PF00005 ABC transporter INR48_RS04900 PF00664 ABC transporter transmembrane region INR48_RS04900 PF00005 ABC transporter INR48_RS04905 PF00543 Nitrogen regulatory protein P-II INR48_RS04910 PF00909 Ammonium Transporter Family INR48_RS04920 PF09619 Type III secretion system lipoprotein chaperone (YscW) INR48_RS04925 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain INR48_RS04940 PF07237 Protein of unknown function (DUF1428) INR48_RS04945 PF12792 CSS motif domain associated with EAL INR48_RS04945 PF00563 EAL domain INR48_RS04950 PF10777 Inner membrane protein YlaC INR48_RS04955 PF14602 Hexapeptide repeat of succinyl-transferase INR48_RS04955 PF12464 Maltose acetyltransferase INR48_RS04960 PF05321 Haemolysin expression modulating protein INR48_RS04965 PF10757 Biofilm formation regulator YbaJ INR48_RS04970 PF00873 AcrB/AcrD/AcrF family INR48_RS04975 PF00529 HlyD membrane-fusion protein of T1SS INR48_RS04975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INR48_RS04980 PF08361 MAATS-type transcriptional repressor, C-terminal region INR48_RS04980 PF00440 Bacterial regulatory proteins, tetR family INR48_RS04985 PF00924 Mechanosensitive ion channel INR48_RS04985 PF12795 Mechanosensitive ion channel porin domain INR48_RS04985 PF12794 Mechanosensitive ion channel inner membrane domain 1 INR48_RS04990 PF10689 Protein of unknown function (DUF2496) INR48_RS04995 PF07445 Primosomal replication protein priC INR48_RS05000 PF04304 Protein of unknown function (DUF454) INR48_RS05005 PF00156 Phosphoribosyl transferase domain INR48_RS05010 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding INR48_RS05010 PF12169 DNA polymerase III subunits gamma and tau domain III INR48_RS05010 PF12170 DNA polymerase III tau subunit V interacting with alpha INR48_RS05015 PF02575 YbaB/EbfC DNA-binding family INR48_RS05020 PF02132 RecR protein INR48_RS05020 PF13662 Toprim domain INR48_RS05025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS05025 PF00183 Hsp90 protein INR48_RS05030 PF05191 Adenylate kinase, active site lid INR48_RS05035 PF00762 Ferrochelatase INR48_RS05040 PF07859 alpha/beta hydrolase fold INR48_RS05045 PF00294 pfkB family carbohydrate kinase INR48_RS05050 PF00999 Sodium/hydrogen exchanger family INR48_RS05050 PF02254 TrkA-N domain INR48_RS05055 PF07690 Major Facilitator Superfamily INR48_RS05060 PF02872 5'-nucleotidase, C-terminal domain INR48_RS05060 PF00149 Calcineurin-like phosphoesterase INR48_RS05065 PF04073 Aminoacyl-tRNA editing domain INR48_RS05070 PF01963 TraB family INR48_RS05075 PF00403 Heavy-metal-associated domain INR48_RS05080 PF04960 Glutaminase INR48_RS05085 PF13520 Amino acid permease INR48_RS05100 PF00005 ABC transporter INR48_RS05100 PF00664 ABC transporter transmembrane region INR48_RS05100 PF03412 Peptidase C39 family INR48_RS05105 PF00529 HlyD membrane-fusion protein of T1SS INR48_RS05110 PF13411 MerR HTH family regulatory protein INR48_RS05135 PF01957 NfeD-like C-terminal, partner-binding INR48_RS05140 PF01145 SPFH domain / Band 7 family INR48_RS05140 PF16200 C-terminal region of band_7 INR48_RS05145 PF00005 ABC transporter INR48_RS05150 PF03649 Uncharacterised protein family (UPF0014) INR48_RS05155 PF00085 Thioredoxin INR48_RS05160 PF00106 short chain dehydrogenase INR48_RS05165 PF13472 GDSL-like Lipase/Acylhydrolase family INR48_RS05170 PF00005 ABC transporter INR48_RS05185 PF03466 LysR substrate binding domain INR48_RS05185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS05190 PF04115 Ureidoglycolate lyase INR48_RS05195 PF09339 IclR helix-turn-helix domain INR48_RS05195 PF01614 Bacterial transcriptional regulator INR48_RS05200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INR48_RS05200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INR48_RS05200 PF00205 Thiamine pyrophosphate enzyme, central domain INR48_RS05205 PF01261 Xylose isomerase-like TIM barrel INR48_RS05210 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase INR48_RS05210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase INR48_RS05215 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin INR48_RS05220 PF01979 Amidohydrolase family INR48_RS05225 PF00860 Permease family INR48_RS05230 PF02595 Glycerate kinase family INR48_RS05235 PF07883 Cupin domain INR48_RS05235 PF05899 Protein of unknown function (DUF861) INR48_RS05240 PF01546 Peptidase family M20/M25/M40 INR48_RS05245 PF02615 Malate/L-lactate dehydrogenase INR48_RS05250 PF00549 CoA-ligase INR48_RS05250 PF02629 CoA binding domain INR48_RS05255 PF06545 Protein of unknown function (DUF1116) INR48_RS05260 PF11392 Protein of unknown function (DUF2877) INR48_RS05265 PF00696 Amino acid kinase family INR48_RS05270 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain INR48_RS05270 PF02222 ATP-grasp domain INR48_RS05275 PF00731 AIR carboxylase INR48_RS05280 PF12850 Calcineurin-like phosphoesterase superfamily domain INR48_RS05285 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD INR48_RS05290 PF01406 tRNA synthetases class I (C) catalytic domain INR48_RS05290 PF09190 DALR domain INR48_RS05295 PF04307 LexA-binding, inner membrane-associated putative hydrolase INR48_RS05305 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain INR48_RS05305 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain INR48_RS05310 PF00419 Fimbrial protein INR48_RS05315 PF02753 Pili assembly chaperone PapD, C-terminal domain INR48_RS05315 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain INR48_RS05320 PF13954 PapC N-terminal domain INR48_RS05320 PF13953 PapC C-terminal domain INR48_RS05320 PF00577 Outer membrane usher protein INR48_RS05325 PF00419 Fimbrial protein INR48_RS05330 PF00419 Fimbrial protein INR48_RS05335 PF00196 Bacterial regulatory proteins, luxR family INR48_RS05335 PF00072 Response regulator receiver domain INR48_RS05345 PF12833 Helix-turn-helix domain INR48_RS05350 PF14488 Domain of unknown function (DUF4434) INR48_RS05355 PF13283 Bacteriophage N adsorption protein A C-term INR48_RS05360 PF13632 Glycosyl transferase family group 2 INR48_RS05360 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain INR48_RS05385 PF01348 Type II intron maturase INR48_RS05385 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) INR48_RS05425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS05425 PF00672 HAMP domain INR48_RS05425 PF00512 His Kinase A (phospho-acceptor) domain INR48_RS05430 PF00486 Transcriptional regulatory protein, C terminal INR48_RS05430 PF00072 Response regulator receiver domain INR48_RS05435 PF02321 Outer membrane efflux protein INR48_RS05440 PF11604 Copper binding periplasmic protein CusF INR48_RS05445 PF00529 HlyD membrane-fusion protein of T1SS INR48_RS05445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INR48_RS05450 PF00873 AcrB/AcrD/AcrF family INR48_RS05455 PF00324 Amino acid permease INR48_RS05460 PF00924 Mechanosensitive ion channel INR48_RS05465 PF00881 Nitroreductase family INR48_RS05470 PF04237 YjbR INR48_RS05475 PF06643 Protein of unknown function (DUF1158) INR48_RS05480 PF04107 Glutamate-cysteine ligase family 2(GCS2) INR48_RS05485 PF01848 Hok/gef family INR48_RS05490 PF01848 Hok/gef family INR48_RS05495 PF17837 4'-phosphopantetheinyl transferase N-terminal domain INR48_RS05495 PF01648 4'-phosphopantetheinyl transferase superfamily INR48_RS05500 PF07715 TonB-dependent Receptor Plug Domain INR48_RS05500 PF00593 TonB dependent receptor INR48_RS05505 PF00756 Putative esterase INR48_RS05505 PF11806 Domain of unknown function (DUF3327) INR48_RS05510 PF03621 MbtH-like protein INR48_RS05515 PF00501 AMP-binding enzyme INR48_RS05515 PF00668 Condensation domain INR48_RS05515 PF00550 Phosphopantetheine attachment site INR48_RS05515 PF00975 Thioesterase domain INR48_RS05520 PF02706 Chain length determinant protein INR48_RS05525 PF00005 ABC transporter INR48_RS05530 PF01032 FecCD transport family INR48_RS05535 PF01032 FecCD transport family INR48_RS05540 PF05977 Transmembrane secretion effector INR48_RS05545 PF01497 Periplasmic binding protein INR48_RS05550 PF00425 chorismate binding enzyme INR48_RS05555 PF00501 AMP-binding enzyme INR48_RS05555 PF13193 AMP-binding enzyme C-terminal domain INR48_RS05560 PF00550 Phosphopantetheine attachment site INR48_RS05560 PF00857 Isochorismatase family INR48_RS05570 PF03061 Thioesterase superfamily INR48_RS05575 PF02554 Carbon starvation protein CstA INR48_RS05575 PF13722 5TM C-terminal transporter carbon starvation CstA INR48_RS05580 PF04328 Selenoprotein, putative INR48_RS05585 PF00465 Iron-containing alcohol dehydrogenase INR48_RS05590 PF00155 Aminotransferase class I and II INR48_RS05595 PF02195 ParB-like nuclease domain INR48_RS05600 PF01507 Phosphoadenosine phosphosulfate reductase family INR48_RS05600 PF11922 Domain of unknown function (DUF3440) INR48_RS05605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS05605 PF03466 LysR substrate binding domain INR48_RS05610 PF13098 Thioredoxin-like domain INR48_RS05615 PF10417 C-terminal domain of 1-Cys peroxiredoxin INR48_RS05615 PF00578 AhpC/TSA family INR48_RS05620 PF07992 Pyridine nucleotide-disulphide oxidoreductase INR48_RS05620 PF13192 Thioredoxin domain INR48_RS05625 PF00582 Universal stress protein family INR48_RS05630 PF14760 Rnk N-terminus INR48_RS05630 PF01272 Transcription elongation factor, GreA/GreB, C-term INR48_RS05635 PF00445 Ribonuclease T2 family INR48_RS05640 PF00939 Sodium:sulfate symporter transmembrane region INR48_RS05645 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase INR48_RS05650 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase INR48_RS05655 PF04223 Citrate lyase, alpha subunit (CitF) INR48_RS05660 PF03328 HpcH/HpaI aldolase/citrate lyase family INR48_RS05665 PF06857 Malonate decarboxylase delta subunit (MdcD) INR48_RS05670 PF08218 Citrate lyase ligase C-terminal domain INR48_RS05675 PF17203 Single cache domain 3 INR48_RS05675 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain INR48_RS05675 PF00989 PAS fold INR48_RS05675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS05680 PF00072 Response regulator receiver domain INR48_RS05680 PF12431 Transcriptional regulator INR48_RS05685 PF03606 C4-dicarboxylate anaerobic carrier INR48_RS05690 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP INR48_RS05695 PF00313 'Cold-shock' DNA-binding domain INR48_RS05700 PF02537 CrcB-like protein, Camphor Resistance (CrcB) INR48_RS05705 PF00795 Carbon-nitrogen hydrolase INR48_RS05710 PF02416 mttA/Hcf106 family INR48_RS05715 PF04055 Radical SAM superfamily INR48_RS05715 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family INR48_RS05720 PF03466 LysR substrate binding domain INR48_RS05720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS05725 PF03099 Biotin/lipoate A/B protein ligase family INR48_RS05730 PF04359 Protein of unknown function (DUF493) INR48_RS05735 PF00768 D-alanyl-D-alanine carboxypeptidase INR48_RS05735 PF07943 Penicillin-binding protein 5, C-terminal domain INR48_RS05740 PF03330 Lytic transglycolase INR48_RS05740 PF05036 Sporulation related domain INR48_RS05745 PF01098 Cell cycle protein INR48_RS05750 PF03717 Penicillin-binding Protein dimerisation domain INR48_RS05750 PF00905 Penicillin binding protein transpeptidase domain INR48_RS05755 PF02590 Predicted SPOUT methyltransferase INR48_RS05765 PF00300 Histidine phosphatase superfamily (branch 1) INR48_RS05770 PF01467 Cytidylyltransferase-like INR48_RS05775 PF06144 DNA polymerase III, delta subunit INR48_RS05775 PF14840 Processivity clamp loader gamma complex DNA pol III C-term INR48_RS05780 PF04390 Lipopolysaccharide-assembly INR48_RS05785 PF00133 tRNA synthetases class I (I, L, M and V) INR48_RS05785 PF13603 Leucyl-tRNA synthetase, Domain 2 INR48_RS05785 PF08264 Anticodon-binding domain of tRNA INR48_RS05790 PF07295 Zinc-ribbon containing domain INR48_RS05795 PF08238 Sel1 repeat INR48_RS05800 PF06889 Protein of unknown function (DUF1266) INR48_RS05810 PF08238 Sel1 repeat INR48_RS05815 PF06889 Protein of unknown function (DUF1266) INR48_RS05825 PF00012 Hsp70 protein INR48_RS05830 PF01156 Inosine-uridine preferring nucleoside hydrolase INR48_RS05835 PF00005 ABC transporter INR48_RS05840 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS05845 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS05850 PF00497 Bacterial extracellular solute-binding proteins, family 3 INR48_RS05855 PF00795 Carbon-nitrogen hydrolase INR48_RS05860 PF03471 Transporter associated domain INR48_RS05860 PF00571 CBS domain INR48_RS05865 PF02130 Uncharacterized protein family UPF0054 INR48_RS05870 PF02562 PhoH-like protein INR48_RS05875 PF00919 Uncharacterized protein family UPF0004 INR48_RS05875 PF01938 TRAM domain INR48_RS05875 PF04055 Radical SAM superfamily INR48_RS05880 PF01494 FAD binding domain INR48_RS05925 PF13537 Glutamine amidotransferase domain INR48_RS05925 PF00733 Asparagine synthase INR48_RS05930 PF13344 Haloacid dehalogenase-like hydrolase INR48_RS05935 PF00480 ROK family INR48_RS05935 PF01047 MarR family INR48_RS05940 PF01979 Amidohydrolase family INR48_RS05945 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase INR48_RS05950 PF02378 Phosphotransferase system, EIIC INR48_RS05950 PF00367 phosphotransferase system, EIIB INR48_RS05950 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 INR48_RS05955 PF00749 tRNA synthetases class I (E and Q), catalytic domain INR48_RS05955 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain INR48_RS05960 PF03573 outer membrane porin, OprD family INR48_RS05965 PF13982 YbfN-like lipoprotein INR48_RS05970 PF01475 Ferric uptake regulator family INR48_RS05980 PF00258 Flavodoxin INR48_RS05985 PF01402 Ribbon-helix-helix protein, copG family INR48_RS05990 PF12697 Alpha/beta hydrolase family INR48_RS05995 PF03925 SeqA protein C-terminal domain INR48_RS05995 PF17206 SeqA protein N-terminal domain INR48_RS06000 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I INR48_RS06000 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III INR48_RS06000 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II INR48_RS06000 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain INR48_RS06010 PF00486 Transcriptional regulatory protein, C terminal INR48_RS06010 PF00072 Response regulator receiver domain INR48_RS06015 PF02702 Osmosensitive K+ channel His kinase sensor domain INR48_RS06015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS06015 PF13492 GAF domain INR48_RS06015 PF13493 Domain of unknown function (DUF4118) INR48_RS06015 PF00512 His Kinase A (phospho-acceptor) domain INR48_RS06020 PF02669 K+-transporting ATPase, c chain INR48_RS06030 PF03814 Potassium-transporting ATPase A subunit INR48_RS06035 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) INR48_RS06040 PF10725 Protein of unknown function (DUF2517) INR48_RS06060 PF08349 Protein of unknown function (DUF1722) INR48_RS06065 PF03441 FAD binding domain of DNA photolyase INR48_RS06065 PF00875 DNA photolyase INR48_RS06070 PF00854 POT family INR48_RS06075 PF01784 NIF3 (NGG1p interacting factor 3) INR48_RS06080 PF02682 Carboxyltransferase domain, subdomain C and D INR48_RS06085 PF02626 Carboxyltransferase domain, subdomain A and B INR48_RS06090 PF03746 LamB/YcsF family INR48_RS06095 PF06827 Zinc finger found in FPG and IleRS INR48_RS06095 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain INR48_RS06095 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain INR48_RS06100 PF05145 Transition state regulatory protein AbrB INR48_RS06105 PF00419 Fimbrial protein INR48_RS06110 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain INR48_RS06110 PF02753 Pili assembly chaperone PapD, C-terminal domain INR48_RS06115 PF13954 PapC N-terminal domain INR48_RS06115 PF13953 PapC C-terminal domain INR48_RS06115 PF00577 Outer membrane usher protein INR48_RS06120 PF00419 Fimbrial protein INR48_RS06125 PF00285 Citrate synthase, C-terminal domain INR48_RS06135 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit INR48_RS06140 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit INR48_RS06145 PF00890 FAD binding domain INR48_RS06145 PF02910 Fumarate reductase flavoprotein C-term INR48_RS06150 PF13085 2Fe-2S iron-sulfur cluster binding domain INR48_RS06155 PF02779 Transketolase, pyrimidine binding domain INR48_RS06155 PF00676 Dehydrogenase E1 component INR48_RS06155 PF16870 2-oxoglutarate dehydrogenase C-terminal INR48_RS06155 PF16078 2-oxoglutarate dehydrogenase N-terminus INR48_RS06160 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) INR48_RS06160 PF00364 Biotin-requiring enzyme INR48_RS06160 PF02817 e3 binding domain INR48_RS06165 PF08442 ATP-grasp domain INR48_RS06165 PF00549 CoA-ligase INR48_RS06170 PF02629 CoA binding domain INR48_RS06170 PF00549 CoA-ligase INR48_RS06180 PF03466 LysR substrate binding domain INR48_RS06180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS06185 PF12557 Cob(I)alamin adenosyltransferase N terminal INR48_RS06185 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP INR48_RS06190 PF05683 Fumarase C-terminus INR48_RS06190 PF05681 Fumarate hydratase (Fumerase) INR48_RS06195 PF00375 Sodium:dicarboxylate symporter family INR48_RS06210 PF07476 Methylaspartate ammonia-lyase C-terminus INR48_RS06210 PF05034 Methylaspartate ammonia-lyase N-terminus INR48_RS06215 PF06368 Methylaspartate mutase E chain (MutE) INR48_RS06220 PF13941 MutL protein INR48_RS06225 PF02310 B12 binding domain INR48_RS06240 PF01654 Cytochrome bd terminal oxidase subunit I INR48_RS06245 PF02322 Cytochrome bd terminal oxidase subunit II INR48_RS06250 PF08173 Membrane bound YbgT-like protein INR48_RS06255 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) INR48_RS06260 PF03061 Thioesterase superfamily INR48_RS06265 PF01618 MotA/TolQ/ExbB proton channel family INR48_RS06270 PF02472 Biopolymer transport protein ExbD/TolR INR48_RS06275 PF06519 TolA C-terminal INR48_RS06280 PF04052 TolB amino-terminal domain INR48_RS06280 PF07676 WD40-like Beta Propeller Repeat INR48_RS06285 PF00691 OmpA family INR48_RS06290 PF16331 TolA binding protein trimerisation INR48_RS06290 PF13174 Tetratricopeptide repeat INR48_RS06335 PF02445 Quinolinate synthetase A protein INR48_RS06340 PF04973 Nicotinamide mononucleotide transporter INR48_RS06345 PF01545 Cation efflux family INR48_RS06350 PF13985 YbgS-like protein INR48_RS06355 PF00793 DAHP synthetase I family INR48_RS06360 PF00300 Histidine phosphatase superfamily (branch 1) INR48_RS06365 PF01263 Aldose 1-epimerase INR48_RS06370 PF08544 GHMP kinases C terminal INR48_RS06370 PF00288 GHMP kinases N terminal domain INR48_RS06370 PF10509 Galactokinase galactose-binding signature INR48_RS06375 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain INR48_RS06375 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain INR48_RS06380 PF16363 GDP-mannose 4,6 dehydratase INR48_RS06385 PF00005 ABC transporter INR48_RS06390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS06390 PF03459 TOBE domain INR48_RS06395 PF10766 Multidrug efflux pump-associated protein AcrZ INR48_RS06405 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS06410 PF03459 TOBE domain INR48_RS06410 PF00005 ABC transporter INR48_RS06420 PF10282 Lactonase, 7-bladed beta-propeller INR48_RS06425 PF03466 LysR substrate binding domain INR48_RS06425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS06430 PF04303 PrpF protein INR48_RS06435 PF00939 Sodium:sulfate symporter transmembrane region INR48_RS06440 PF00694 Aconitase C-terminal domain INR48_RS06440 PF00330 Aconitase family (aconitate hydratase) INR48_RS06445 PF01095 Pectinesterase INR48_RS06450 PF00589 Phage integrase family INR48_RS06450 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain INR48_RS06505 PF10065 Uncharacterized conserved protein (DUF2303) INR48_RS06555 PF06069 PerC transcriptional activator INR48_RS06560 PF00717 Peptidase S24-like INR48_RS06560 PF01726 LexA DNA binding domain INR48_RS06565 PF05866 Endodeoxyribonuclease RusA INR48_RS06575 PF06147 Protein of unknown function (DUF968) INR48_RS06580 PF06530 Phage antitermination protein Q INR48_RS06625 PF03354 Phage Terminase INR48_RS06635 PF04860 Phage portal protein INR48_RS06680 PF04984 Phage tail sheath protein subtilisin-like domain INR48_RS06680 PF17482 Phage tail sheath C-terminal domain INR48_RS06705 PF07157 DNA circularisation protein N-terminus INR48_RS06725 PF04865 Baseplate J-like protein INR48_RS06730 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) INR48_RS06740 PF02413 Caudovirales tail fibre assembly protein, lambda gpK INR48_RS06755 PF00535 Glycosyl transferase family 2 INR48_RS06760 PF04138 GtrA-like protein INR48_RS06765 PF01161 Phosphatidylethanolamine-binding protein INR48_RS06770 PF00202 Aminotransferase class-III INR48_RS06775 PF06968 Biotin and Thiamin Synthesis associated domain INR48_RS06775 PF04055 Radical SAM superfamily INR48_RS06780 PF00155 Aminotransferase class I and II INR48_RS06785 PF08241 Methyltransferase domain INR48_RS06795 PF17757 UvrB interaction domain INR48_RS06795 PF00271 Helicase conserved C-terminal domain INR48_RS06795 PF04851 Type III restriction enzyme, res subunit INR48_RS06795 PF02151 UvrB/uvrC motif INR48_RS06795 PF12344 Ultra-violet resistance protein B INR48_RS06800 PF01933 Uncharacterised protein family UPF0052 INR48_RS06805 PF04055 Radical SAM superfamily INR48_RS06805 PF06463 Molybdenum Cofactor Synthesis C INR48_RS06810 PF00994 Probable molybdopterin binding domain INR48_RS06815 PF01967 MoaC family INR48_RS06820 PF02597 ThiS family INR48_RS06825 PF02391 MoaE protein INR48_RS06830 PF01027 Inhibitor of apoptosis-promoting Bax1 INR48_RS06835 PF01027 Inhibitor of apoptosis-promoting Bax1 INR48_RS06840 PF03706 Lysylphosphatidylglycerol synthase TM region INR48_RS06845 PF13091 PLD-like domain INR48_RS06850 PF03372 Endonuclease/Exonuclease/phosphatase family INR48_RS06855 PF11076 Putative inner membrane protein YbhQ INR48_RS06870 PF00005 ABC transporter INR48_RS06875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INR48_RS06880 PF09209 Tetracyclin repressor-like, C-terminal domain INR48_RS06880 PF00440 Bacterial regulatory proteins, tetR family INR48_RS06885 PF00270 DEAD/DEAH box helicase INR48_RS06885 PF00271 Helicase conserved C-terminal domain INR48_RS06890 PF08719 Domain of unknown function (DUF1768) INR48_RS06895 PF06733 DEAD_2 INR48_RS06895 PF13307 Helicase C-terminal domain INR48_RS06895 PF00270 DEAD/DEAH box helicase INR48_RS06900 PF02885 Glycosyl transferase family, helical bundle domain INR48_RS06905 PF02615 Malate/L-lactate dehydrogenase INR48_RS06910 PF07338 Protein of unknown function (DUF1471) INR48_RS06915 PF01258 Prokaryotic dksA/traR C4-type zinc finger INR48_RS06920 PF18331 PKHD-type hydroxylase C-terminal domain INR48_RS06920 PF13640 2OG-Fe(II) oxygenase superfamily INR48_RS06925 PF07715 TonB-dependent Receptor Plug Domain INR48_RS06925 PF00593 TonB dependent receptor INR48_RS06930 PF07338 Protein of unknown function (DUF1471) INR48_RS06935 PF05971 RNA methyltransferase INR48_RS06940 PF00924 Mechanosensitive ion channel INR48_RS06945 PF00005 ABC transporter INR48_RS06950 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS06955 PF00497 Bacterial extracellular solute-binding proteins, family 3 INR48_RS06960 PF00210 Ferritin-like domain INR48_RS06965 PF00892 EamA-like transporter family INR48_RS06975 PF13505 Outer membrane protein beta-barrel domain INR48_RS06980 PF00884 Sulfatase INR48_RS06990 PF02742 Iron dependent repressor, metal binding and dimerisation domain INR48_RS06990 PF01325 Iron dependent repressor, N-terminal DNA binding domain INR48_RS06995 PF03600 Citrate transporter INR48_RS07000 PF03734 L,D-transpeptidase catalytic domain INR48_RS07000 PF17969 L,D-transpeptidase C-terminal domain INR48_RS07005 PF12848 ABC transporter INR48_RS07005 PF00005 ABC transporter INR48_RS07010 PF13802 Galactose mutarotase-like INR48_RS07010 PF01055 Glycosyl hydrolases family 31 INR48_RS07010 PF17137 Domain of unknown function (DUF5110) INR48_RS07010 PF16338 Domain of unknown function (DUF4968) INR48_RS07015 PF07690 Major Facilitator Superfamily INR48_RS07020 PF00356 Bacterial regulatory proteins, lacI family INR48_RS07025 PF07350 Protein of unknown function (DUF1479) INR48_RS07035 PF01228 Glycine radical INR48_RS07035 PF02901 Pyruvate formate lyase-like INR48_RS07040 PF04055 Radical SAM superfamily INR48_RS07045 PF00923 Transaldolase/Fructose-6-phosphate aldolase INR48_RS07050 PF00899 ThiF family INR48_RS07055 PF00994 Probable molybdopterin binding domain INR48_RS07055 PF03454 MoeA C-terminal region (domain IV) INR48_RS07055 PF03453 MoeA N-terminal region (domain I and II) INR48_RS07060 PF01112 Asparaginase INR48_RS07065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INR48_RS07065 PF00005 ABC transporter INR48_RS07070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INR48_RS07075 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS07080 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS07080 PF12911 N-terminal TM domain of oligopeptide transport permease C INR48_RS07085 PF17153 Periplasmic sensor domain, extracellular INR48_RS07085 PF00563 EAL domain INR48_RS07090 PF17156 Gammaproteobacterial periplasmic sensor domain INR48_RS07090 PF00990 Diguanylate cyclase, GGDEF domain INR48_RS07105 PF04055 Radical SAM superfamily INR48_RS07105 PF18693 TRAM domain INR48_RS07105 PF00919 Uncharacterized protein family UPF0004 INR48_RS07110 PF10799 Biofilm formation protein (YliH/bssR) INR48_RS07115 PF07995 Glucose / Sorbosone dehydrogenase INR48_RS07120 PF13417 Glutathione S-transferase, N-terminal domain INR48_RS07120 PF00043 Glutathione S-transferase, C-terminal domain INR48_RS07125 PF07943 Penicillin-binding protein 5, C-terminal domain INR48_RS07125 PF00768 D-alanyl-D-alanine carboxypeptidase INR48_RS07130 PF00455 DeoR C terminal sensor domain INR48_RS07130 PF08220 DeoR-like helix-turn-helix domain INR48_RS07135 PF01569 PAP2 superfamily INR48_RS07140 PF07690 Major Facilitator Superfamily INR48_RS07155 PF07690 Major Facilitator Superfamily INR48_RS07160 PF00440 Bacterial regulatory proteins, tetR family INR48_RS07165 PF00589 Phage integrase family INR48_RS07165 PF02899 Phage integrase, N-terminal SAM-like domain INR48_RS07175 PF16452 Bacteriophage CI repressor C-terminal domain INR48_RS07175 PF07022 Bacteriophage CI repressor helix-turn-helix domain INR48_RS07185 PF06892 Phage regulatory protein CII (CP76) INR48_RS07195 PF17282 Family of unknown function (DUF5347) INR48_RS07205 PF01258 Prokaryotic dksA/traR C4-type zinc finger INR48_RS07210 PF02086 D12 class N6 adenine-specific DNA methyltransferase INR48_RS07215 PF05840 Bacteriophage replication gene A protein (GPA) INR48_RS07225 PF06183 DinI-like family INR48_RS07230 PF00583 Acetyltransferase (GNAT) family INR48_RS07340 PF07484 Phage Tail Collar Domain INR48_RS07345 PF02413 Caudovirales tail fibre assembly protein, lambda gpK INR48_RS07355 PF00239 Resolvase, N terminal domain INR48_RS07355 PF02796 Helix-turn-helix domain of resolvase INR48_RS07360 PF04984 Phage tail sheath protein subtilisin-like domain INR48_RS07360 PF17482 Phage tail sheath C-terminal domain INR48_RS07395 PF04606 Ogr/Delta-like zinc finger INR48_RS07400 PF02080 TrkA-C domain INR48_RS07400 PF06826 Predicted Permease Membrane Region INR48_RS07405 PF11045 Putative inner membrane protein of Enterobacteriaceae INR48_RS07410 PF00462 Glutaredoxin INR48_RS07415 PF07214 Protein of unknown function (DUF1418) INR48_RS07420 PF00881 Nitroreductase family INR48_RS07425 PF18030 RimK PreATP-grasp domain INR48_RS07425 PF08443 RimK-like ATP-grasp domain INR48_RS07430 PF10722 Putative bacterial sensory transduction regulator INR48_RS07435 PF13416 Bacterial extracellular solute-binding protein INR48_RS07440 PF00005 ABC transporter INR48_RS07440 PF08402 TOBE domain INR48_RS07445 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS07450 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS07455 PF10767 Protein of unknown function (DUF2593) INR48_RS07460 PF05958 tRNA (Uracil-5-)-methyltransferase INR48_RS07465 PF03611 PTS system sugar-specific permease component INR48_RS07480 PF00497 Bacterial extracellular solute-binding proteins, family 3 INR48_RS07485 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS07490 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS07495 PF00497 Bacterial extracellular solute-binding proteins, family 3 INR48_RS07500 PF00005 ABC transporter INR48_RS07505 PF12883 Protein of unknown function (DUF3828) INR48_RS07515 PF01906 Putative heavy-metal-binding INR48_RS07520 PF01510 N-acetylmuramoyl-L-alanine amidase INR48_RS07525 PF01370 NAD dependent epimerase/dehydratase family INR48_RS07530 PF11066 Protein of unknown function (DUF2867) INR48_RS07530 PF13460 NAD(P)H-binding INR48_RS07535 PF01212 Beta-eliminating lyase INR48_RS07540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INR48_RS07540 PF00205 Thiamine pyrophosphate enzyme, central domain INR48_RS07540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INR48_RS07545 PF00970 Oxidoreductase FAD-binding domain INR48_RS07545 PF00175 Oxidoreductase NAD-binding domain INR48_RS07545 PF00111 2Fe-2S iron-sulfur cluster binding domain INR48_RS07550 PF03063 Prismane/CO dehydrogenase family INR48_RS07555 PF03956 Lysine exporter LysO INR48_RS07560 PF00230 Major intrinsic protein INR48_RS07565 PF11398 Protein of unknown function (DUF2813) INR48_RS07570 PF04393 Protein of unknown function (DUF535) INR48_RS07575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INR48_RS07580 PF00005 ABC transporter INR48_RS07580 PF12704 MacB-like periplasmic core domain INR48_RS07580 PF02687 FtsX-like permease family INR48_RS07585 PF00313 'Cold-shock' DNA-binding domain INR48_RS07590 PF02617 ATP-dependent Clp protease adaptor protein ClpS INR48_RS07595 PF00004 ATPase family associated with various cellular activities (AAA) INR48_RS07595 PF07724 AAA domain (Cdc48 subfamily) INR48_RS07595 PF17871 AAA lid domain INR48_RS07595 PF02861 Clp amino terminal domain, pathogenicity island component INR48_RS07595 PF10431 C-terminal, D2-small domain, of ClpB protein INR48_RS07610 PF01176 Translation initiation factor 1A / IF-1 INR48_RS07615 PF03588 Leucyl/phenylalanyl-tRNA protein transferase INR48_RS07620 PF00664 ABC transporter transmembrane region INR48_RS07620 PF00005 ABC transporter INR48_RS07625 PF00664 ABC transporter transmembrane region INR48_RS07625 PF00005 ABC transporter INR48_RS07630 PF07992 Pyridine nucleotide-disulphide oxidoreductase INR48_RS07635 PF01037 Lrp/AsnC ligand binding domain INR48_RS07640 PF17854 FtsK alpha domain INR48_RS07640 PF01580 FtsK/SpoIIIE family INR48_RS07640 PF09397 Ftsk gamma domain INR48_RS07640 PF13491 4TM region of DNA translocase FtsK/SpoIIIE INR48_RS07645 PF03548 Outer membrane lipoprotein carrier protein LolA INR48_RS07650 PF16193 AAA C-terminal domain INR48_RS07650 PF12002 MgsA AAA+ ATPase C terminal INR48_RS07650 PF00004 ATPase family associated with various cellular activities (AAA) INR48_RS07655 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) INR48_RS07655 PF02403 Seryl-tRNA synthetase N-terminal domain INR48_RS07660 PF04879 Molybdopterin oxidoreductase Fe4S4 domain INR48_RS07660 PF01568 Molydopterin dinucleotide binding domain INR48_RS07660 PF00384 Molybdopterin oxidoreductase INR48_RS07665 PF12800 4Fe-4S binding domain INR48_RS07665 PF13247 4Fe-4S dicluster domain INR48_RS07670 PF04976 DMSO reductase anchor subunit (DmsC) INR48_RS07675 PF00857 Isochorismatase family INR48_RS07680 PF07690 Major Facilitator Superfamily INR48_RS07685 PF13520 Amino acid permease INR48_RS07695 PF04055 Radical SAM superfamily INR48_RS07700 PF01228 Glycine radical INR48_RS07700 PF02901 Pyruvate formate lyase-like INR48_RS07705 PF01226 Formate/nitrite transporter INR48_RS07710 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding INR48_RS07710 PF18381 YcaO cyclodehydratase C-terminal domain INR48_RS07715 PF04239 Protein of unknown function (DUF421) INR48_RS07720 PF00266 Aminotransferase class-V INR48_RS07725 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) INR48_RS07730 PF01435 Peptidase family M48 INR48_RS07735 PF02224 Cytidylate kinase INR48_RS07740 PF00575 S1 RNA binding domain INR48_RS07745 PF00216 Bacterial DNA-binding protein INR48_RS07750 PF00753 Metallo-beta-lactamase superfamily INR48_RS07750 PF03772 Competence protein INR48_RS07755 PF00005 ABC transporter INR48_RS07755 PF00664 ABC transporter transmembrane region INR48_RS07760 PF02606 Tetraacyldisaccharide-1-P 4'-kinase INR48_RS07765 PF06224 Winged helix DNA-binding domain INR48_RS07770 PF03966 Trm112p-like protein INR48_RS07775 PF02348 Cytidylyltransferase INR48_RS07780 PF01636 Phosphotransferase enzyme family INR48_RS07785 PF02698 DUF218 domain INR48_RS07790 PF13847 Methyltransferase domain INR48_RS07795 PF03882 MukF winged-helix domain INR48_RS07795 PF17192 MukF middle domain INR48_RS07795 PF17193 MukF C-terminal domain INR48_RS07800 PF04288 MukE-like family INR48_RS07805 PF16330 MukB hinge domain INR48_RS07805 PF04310 MukB N-terminal INR48_RS07810 PF03734 L,D-transpeptidase catalytic domain INR48_RS07810 PF01471 Putative peptidoglycan binding domain INR48_RS07815 PF05951 Bacterial protein of unknown function (DUF882) INR48_RS07820 PF00753 Metallo-beta-lactamase superfamily INR48_RS07825 PF00155 Aminotransferase class I and II INR48_RS07830 PF00267 Gram-negative porin INR48_RS07835 PF01336 OB-fold nucleic acid binding domain INR48_RS07835 PF00152 tRNA synthetases class II (D, K and N) INR48_RS07840 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain INR48_RS07840 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family INR48_RS07845 PF11940 Domain of unknown function (DUF3458) Ig-like fold INR48_RS07845 PF01433 Peptidase family M1 domain INR48_RS07845 PF17432 Domain of unknown function (DUF3458_C) ARM repeats INR48_RS07855 PF00005 ABC transporter INR48_RS07860 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS07865 PF00296 Luciferase-like monooxygenase INR48_RS07870 PF09084 NMT1/THI5 like INR48_RS07875 PF03358 NADPH-dependent FMN reductase INR48_RS07880 PF01180 Dihydroorotate dehydrogenase INR48_RS07885 PF07126 Cell-division protein ZapC INR48_RS07890 PF03473 MOSC domain INR48_RS07890 PF00111 2Fe-2S iron-sulfur cluster binding domain INR48_RS07890 PF03476 MOSC N-terminal beta barrel domain INR48_RS07895 PF02926 THUMP domain INR48_RS07895 PF01170 Putative RNA methylase family UPF0020 INR48_RS07895 PF10672 S-adenosylmethionine-dependent methyltransferase INR48_RS07900 PF00005 ABC transporter INR48_RS07900 PF12848 ABC transporter INR48_RS07900 PF16326 ABC transporter C-terminal domain INR48_RS07905 PF04403 Paraquat-inducible protein A INR48_RS07910 PF02470 MlaD protein INR48_RS07915 PF03886 ABC-type transport auxiliary lipoprotein component INR48_RS07920 PF04957 Ribosome modulation factor INR48_RS07925 PF07977 FabA-like domain INR48_RS07930 PF13654 AAA domain INR48_RS07930 PF05362 Lon protease (S16) C-terminal proteolytic domain INR48_RS07935 PF06303 MatP N-terminal domain INR48_RS07935 PF17414 MatP C-terminal ribbon-helix-helix domain INR48_RS07940 PF01389 OmpA-like transmembrane domain INR48_RS07940 PF00691 OmpA family INR48_RS07945 PF03846 Cell division inhibitor SulA INR48_RS07950 PF04994 TfoX C-terminal domain INR48_RS07950 PF04993 TfoX N-terminal domain INR48_RS07955 PF12805 FUSC-like inner membrane protein yccS INR48_RS07960 PF03733 Inner membrane component domain INR48_RS07965 PF13361 UvrD-like helicase C-terminal domain INR48_RS07965 PF12462 DNA helicase IV / RNA helicase N terminal INR48_RS07965 PF00580 UvrD/REP helicase N-terminal domain INR48_RS07970 PF02142 MGS-like domain INR48_RS07975 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) INR48_RS07980 PF13380 CoA binding domain INR48_RS07985 PF08755 Hemimethylated DNA-binding protein YccV like INR48_RS07990 PF10672 S-adenosylmethionine-dependent methyltransferase INR48_RS07990 PF17785 PUA-like domain INR48_RS07995 PF00708 Acylphosphatase INR48_RS08000 PF04358 DsrC like protein INR48_RS08005 PF01027 Inhibitor of apoptosis-promoting Bax1 INR48_RS08015 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit INR48_RS08015 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal INR48_RS08020 PF00374 Nickel-dependent hydrogenase INR48_RS08025 PF01292 Prokaryotic cytochrome b561 INR48_RS08030 PF01750 Hydrogenase maturation protease INR48_RS08035 PF07449 Hydrogenase-1 expression protein HyaE INR48_RS08040 PF04809 HupH hydrogenase expression protein, C-terminal conserved region INR48_RS08045 PF01654 Cytochrome bd terminal oxidase subunit I INR48_RS08050 PF02322 Cytochrome bd terminal oxidase subunit II INR48_RS08055 PF08173 Membrane bound YbgT-like protein INR48_RS08060 PF00328 Histidine phosphatase superfamily (branch 2) INR48_RS08065 PF00313 'Cold-shock' DNA-binding domain INR48_RS08070 PF00313 'Cold-shock' DNA-binding domain INR48_RS08080 PF15939 Putative antitoxin of bacterial toxin-antitoxin system INR48_RS08085 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system INR48_RS08090 PF12801 4Fe-4S binding domain INR48_RS08095 PF00672 HAMP domain INR48_RS08095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS08095 PF00512 His Kinase A (phospho-acceptor) domain INR48_RS08095 PF01627 Hpt domain INR48_RS08095 PF00072 Response regulator receiver domain INR48_RS08100 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family INR48_RS08105 PF00486 Transcriptional regulatory protein, C terminal INR48_RS08105 PF00072 Response regulator receiver domain INR48_RS08110 PF03264 NapC/NirT cytochrome c family, N-terminal region INR48_RS08115 PF18364 Molybdopterin oxidoreductase N-terminal domain INR48_RS08115 PF01568 Molydopterin dinucleotide binding domain INR48_RS08115 PF00384 Molybdopterin oxidoreductase INR48_RS08120 PF02613 Nitrate reductase delta subunit INR48_RS08130 PF01556 DnaJ C terminal domain INR48_RS08130 PF00226 DnaJ domain INR48_RS08140 PF00328 Histidine phosphatase superfamily (branch 2) INR48_RS08145 PF13993 YccJ-like protein INR48_RS08150 PF03358 NADPH-dependent FMN reductase INR48_RS08155 PF10685 Stress-induced bacterial acidophilic repeat motif INR48_RS08160 PF00860 Permease family INR48_RS08165 PF01613 Flavin reductase like domain INR48_RS08170 PF00881 Nitroreductase family INR48_RS08175 PF00561 alpha/beta hydrolase fold INR48_RS08180 PF01042 Endoribonuclease L-PSP INR48_RS08185 PF00857 Isochorismatase family INR48_RS08190 PF00296 Luciferase-like monooxygenase INR48_RS08195 PF00440 Bacterial regulatory proteins, tetR family INR48_RS08195 PF08362 YcdC-like protein, C-terminal region INR48_RS08200 PF14850 DNA-binding domain of Proline dehydrogenase INR48_RS08200 PF18327 Proline utilization A proline dehydrogenase N-terminal domain INR48_RS08200 PF00171 Aldehyde dehydrogenase family INR48_RS08200 PF01619 Proline dehydrogenase INR48_RS08210 PF00474 Sodium:solute symporter family INR48_RS08220 PF03239 Iron permease FTR1 family INR48_RS08225 PF09375 Imelysin INR48_RS08225 PF13473 Cupredoxin-like domain INR48_RS08230 PF04261 Dyp-type peroxidase family INR48_RS08235 PF02562 PhoH-like protein INR48_RS08250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INR48_RS08255 PF02811 PHP domain INR48_RS08260 PF02613 Nitrate reductase delta subunit INR48_RS08265 PF06496 Protein of unknown function (DUF1097) INR48_RS08270 PF03783 Curli production assembly/transport component CsgG INR48_RS08275 PF10614 Type VIII secretion system (T8SS), CsgF protein INR48_RS08280 PF10627 Curli assembly protein CsgE INR48_RS08285 PF00196 Bacterial regulatory proteins, luxR family INR48_RS08290 PF07012 Curlin associated repeat INR48_RS08295 PF07012 Curlin associated repeat INR48_RS08300 PF10610 Thin aggregative fimbriae synthesis protein INR48_RS08310 PF01661 Macro domain INR48_RS08315 PF13091 PLD-like domain INR48_RS08320 PF01757 Acyltransferase family INR48_RS08325 PF04349 Periplasmic glucan biosynthesis protein, MdoG INR48_RS08330 PF00535 Glycosyl transferase family 2 INR48_RS08335 PF07119 Protein of unknown function (DUF1375) INR48_RS08340 PF13984 MsyB protein INR48_RS08345 PF07690 Major Facilitator Superfamily INR48_RS08350 PF03279 Bacterial lipid A biosynthesis acyltransferase INR48_RS08355 PF17773 UPF0176 acylphosphatase like domain INR48_RS08355 PF12368 Rhodanase C-terminal INR48_RS08355 PF00581 Rhodanese-like domain INR48_RS08360 PF04264 YceI-like domain INR48_RS08365 PF01292 Prokaryotic cytochrome b561 INR48_RS08370 PF10968 Protein of unknown function (DUF2770) INR48_RS08375 PF01266 FAD dependent oxidoreductase INR48_RS08380 PF13991 BssS protein family INR48_RS08385 PF06183 DinI-like family INR48_RS08390 PF01979 Amidohydrolase family INR48_RS08395 PF07273 Protein of unknown function (DUF1439) INR48_RS08400 PF13417 Glutathione S-transferase, N-terminal domain INR48_RS08400 PF04399 Glutaredoxin 2, C terminal domain INR48_RS08405 PF07690 Major Facilitator Superfamily INR48_RS08410 PF13302 Acetyltransferase (GNAT) domain INR48_RS08415 PF04337 Protein of unknown function, DUF480 INR48_RS08420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold INR48_RS08425 PF03023 Lipid II flippase MurJ INR48_RS08430 PF05130 FlgN protein INR48_RS08435 PF04316 Anti-sigma-28 factor, FlgM INR48_RS08440 PF13144 Chaperone for flagella basal body P-ring formation INR48_RS08445 PF00460 Flagella basal body rod protein INR48_RS08450 PF00460 Flagella basal body rod protein INR48_RS08450 PF06429 Flagellar basal body rod FlgEFG protein C-terminal INR48_RS08455 PF03963 Flagellar hook capping protein - N-terminal region INR48_RS08455 PF13860 FlgD Ig-like domain INR48_RS08455 PF13861 FlgD Tudor-like domain INR48_RS08460 PF00460 Flagella basal body rod protein INR48_RS08460 PF07559 Flagellar basal body protein FlaE INR48_RS08460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal INR48_RS08465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal INR48_RS08465 PF00460 Flagella basal body rod protein INR48_RS08470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal INR48_RS08470 PF00460 Flagella basal body rod protein INR48_RS08475 PF02107 Flagellar L-ring protein INR48_RS08480 PF02119 Flagellar P-ring protein INR48_RS08485 PF10135 Rod binding protein INR48_RS08485 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase INR48_RS08490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal INR48_RS08490 PF00460 Flagella basal body rod protein INR48_RS08495 PF00669 Bacterial flagellin N-terminal helical region INR48_RS08510 PF10150 Ribonuclease E/G family INR48_RS08510 PF00575 S1 RNA binding domain INR48_RS08510 PF12111 Polyribonucleotide phosphorylase C terminal INR48_RS08515 PF00849 RNA pseudouridylate synthase INR48_RS08515 PF01479 S4 domain INR48_RS08520 PF02545 Maf-like protein INR48_RS08525 PF02620 Large ribosomal RNA subunit accumulation protein YceD INR48_RS08530 PF01783 Ribosomal L32p protein family INR48_RS08535 PF02504 Fatty acid synthesis protein INR48_RS08540 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal INR48_RS08540 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III INR48_RS08545 PF00698 Acyl transferase domain INR48_RS08555 PF00550 Phosphopantetheine attachment site INR48_RS08560 PF00109 Beta-ketoacyl synthase, N-terminal domain INR48_RS08560 PF02801 Beta-ketoacyl synthase, C-terminal domain INR48_RS08565 PF01063 Amino-transferase class IV INR48_RS08570 PF02618 YceG-like family INR48_RS08575 PF02223 Thymidylate kinase INR48_RS08580 PF09115 DNA polymerase III, delta subunit, C terminal INR48_RS08585 PF01026 TatD related DNase INR48_RS08590 PF02378 Phosphotransferase system, EIIC INR48_RS08590 PF00367 phosphotransferase system, EIIB INR48_RS08595 PF07715 TonB-dependent Receptor Plug Domain INR48_RS08595 PF00593 TonB dependent receptor INR48_RS08600 PF01230 HIT domain INR48_RS08605 PF07233 Protein of unknown function (DUF1425) INR48_RS08610 PF13036 Peptidoglycan-synthase activator LpoB INR48_RS08615 PF01636 Phosphotransferase enzyme family INR48_RS08620 PF00933 Glycosyl hydrolase family 3 N terminal domain INR48_RS08625 PF05728 Uncharacterised protein family (UPF0227) INR48_RS08630 PF07992 Pyridine nucleotide-disulphide oxidoreductase INR48_RS08635 PF05433 Glycine zipper 2TM domain INR48_RS08640 PF00440 Bacterial regulatory proteins, tetR family INR48_RS08645 PF07338 Protein of unknown function (DUF1471) INR48_RS08650 PF17969 L,D-transpeptidase C-terminal domain INR48_RS08650 PF01476 LysM domain INR48_RS08650 PF03734 L,D-transpeptidase catalytic domain INR48_RS08655 PF02559 CarD-like/TRCF domain INR48_RS08655 PF17757 UvrB interaction domain INR48_RS08655 PF03461 TRCF domain INR48_RS08655 PF00271 Helicase conserved C-terminal domain INR48_RS08655 PF00270 DEAD/DEAH box helicase INR48_RS08660 PF01757 Acyltransferase family INR48_RS08665 PF02687 FtsX-like permease family INR48_RS08665 PF12704 MacB-like periplasmic core domain INR48_RS08670 PF00005 ABC transporter INR48_RS08675 PF12704 MacB-like periplasmic core domain INR48_RS08675 PF02687 FtsX-like permease family INR48_RS08680 PF00480 ROK family INR48_RS08685 PF02146 Sir2 family INR48_RS08690 PF04536 TPM domain INR48_RS08695 PF12158 Protein of unknown function (DUF3592) INR48_RS08700 PF13416 Bacterial extracellular solute-binding protein INR48_RS08705 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS08710 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS08715 PF00005 ABC transporter INR48_RS08715 PF08402 TOBE domain INR48_RS08720 PF07687 Peptidase dimerisation domain INR48_RS08720 PF01546 Peptidase family M20/M25/M40 INR48_RS08725 PF08007 Cupin superfamily protein INR48_RS08730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS08730 PF08918 PhoQ Sensor INR48_RS08735 PF00072 Response regulator receiver domain INR48_RS08735 PF00486 Transcriptional regulatory protein, C terminal INR48_RS08740 PF08328 Adenylosuccinate lyase C-terminal INR48_RS08740 PF00206 Lyase INR48_RS08745 PF04356 Protein of unknown function (DUF489) INR48_RS08755 PF00293 NUDIX domain INR48_RS08760 PF00849 RNA pseudouridylate synthase INR48_RS08765 PF00180 Isocitrate/isopropylmalate dehydrogenase INR48_RS08785 PF07166 Protein of unknown function (DUF1398) INR48_RS08790 PF13411 MerR HTH family regulatory protein INR48_RS08795 PF00563 EAL domain INR48_RS08795 PF04940 Sensors of blue-light using FAD INR48_RS08800 PF10798 Biofilm development protein YmgB/AriR INR48_RS08810 PF10798 Biofilm development protein YmgB/AriR INR48_RS08820 PF12792 CSS motif domain associated with EAL INR48_RS08820 PF00563 EAL domain INR48_RS08840 PF16456 YmgD protein INR48_RS08845 PF13436 Glycine-zipper domain INR48_RS08870 PF03776 Septum formation topological specificity factor MinE INR48_RS08875 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain INR48_RS08880 PF03775 Septum formation inhibitor MinC, C-terminal domain INR48_RS08880 PF05209 Septum formation inhibitor MinC, N-terminal domain INR48_RS08885 PF05666 Fels-1 Prophage Protein-like INR48_RS08890 PF04151 Bacterial pre-peptidase C-terminal domain INR48_RS08900 PF05166 YcgL domain INR48_RS08905 PF01557 Fumarylacetoacetate (FAA) hydrolase family INR48_RS08910 PF03692 Putative zinc- or iron-chelating domain INR48_RS08915 PF06109 Haemolysin E (HlyE) INR48_RS08920 PF00717 Peptidase S24-like INR48_RS08925 PF13438 Domain of unknown function (DUF4113) INR48_RS08925 PF11799 impB/mucB/samB family C-terminal domain INR48_RS08925 PF00817 impB/mucB/samB family INR48_RS08925 PF11798 IMS family HHH motif INR48_RS08930 PF02600 Disulfide bond formation protein DsbB INR48_RS08935 PF06450 Bacterial Na+/H+ antiporter B (NhaB) INR48_RS08940 PF07840 FadR C-terminal domain INR48_RS08940 PF00392 Bacterial regulatory proteins, gntR family INR48_RS08945 PF04293 SpoVR like protein INR48_RS08950 PF01266 FAD dependent oxidoreductase INR48_RS08955 PF00842 Alanine racemase, C-terminal domain INR48_RS08955 PF01168 Alanine racemase, N-terminal domain INR48_RS08970 PF03471 Transporter associated domain INR48_RS08970 PF00999 Sodium/hydrogen exchanger family INR48_RS08970 PF02080 TrkA-C domain INR48_RS08975 PF02016 LD-carboxypeptidase N-terminal domain INR48_RS08975 PF17676 LD-carboxypeptidase C-terminal domain INR48_RS08980 PF01464 Transglycosylase SLT domain INR48_RS08985 PF07238 PilZ domain INR48_RS08985 PF07317 Flagellar regulator YcgR INR48_RS08990 PF04226 Transglycosylase associated protein INR48_RS09000 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain INR48_RS09000 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain INR48_RS09005 PF13649 Methyltransferase domain INR48_RS09010 PF00005 ABC transporter INR48_RS09015 PF01032 FecCD transport family INR48_RS09025 PF01204 Trehalase INR48_RS09030 PF05524 PEP-utilising enzyme, N-terminal INR48_RS09030 PF00391 PEP-utilising enzyme, mobile domain INR48_RS09030 PF03610 PTS system fructose IIA component INR48_RS09030 PF00381 PTS HPr component phosphorylation site INR48_RS09035 PF02734 DAK2 domain INR48_RS09040 PF02733 Dak1 domain INR48_RS09045 PF02954 Bacterial regulatory protein, Fis family INR48_RS09045 PF00158 Sigma-54 interaction domain INR48_RS09045 PF00989 PAS fold INR48_RS09050 PF03212 Pertactin INR48_RS09050 PF03797 Autotransporter beta-domain INR48_RS09055 PF06071 Protein of unknown function (DUF933) INR48_RS09055 PF01926 50S ribosome-binding GTPase INR48_RS09060 PF01195 Peptidyl-tRNA hydrolase INR48_RS09065 PF10762 Protein of unknown function (DUF2583) INR48_RS09070 PF00916 Sulfate permease family INR48_RS09070 PF01740 STAS domain INR48_RS09075 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase INR48_RS09075 PF14572 Phosphoribosyl synthetase-associated domain INR48_RS09080 PF00288 GHMP kinases N terminal domain INR48_RS09080 PF08544 GHMP kinases C terminal INR48_RS09085 PF03550 Outer membrane lipoprotein LolB INR48_RS09090 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain INR48_RS09090 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain INR48_RS09090 PF01488 Shikimate / quinate 5-dehydrogenase INR48_RS09095 PF00472 RF-1 domain INR48_RS09095 PF03462 PCRF domain INR48_RS09100 PF17827 PrmC N-terminal domain INR48_RS09100 PF13847 Methyltransferase domain INR48_RS09105 PF04247 Invasion gene expression up-regulator, SirB INR48_RS09110 PF13369 Transglutaminase-like superfamily INR48_RS09115 PF00793 DAHP synthetase I family INR48_RS09120 PF13940 Toxin Ldr, type I toxin-antitoxin system INR48_RS09125 PF13940 Toxin Ldr, type I toxin-antitoxin system INR48_RS09130 PF01699 Sodium/calcium exchanger protein INR48_RS09135 PF06150 ChaB INR48_RS09140 PF04752 ChaC-like protein INR48_RS09145 PF02635 DsrE/DsrF-like family INR48_RS09150 PF11924 Inverse autotransporter, beta-domain INR48_RS09155 PF00072 Response regulator receiver domain INR48_RS09155 PF00196 Bacterial regulatory proteins, luxR family INR48_RS09160 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term INR48_RS09160 PF00672 HAMP domain INR48_RS09160 PF07730 Histidine kinase INR48_RS09160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS09165 PF07690 Major Facilitator Superfamily INR48_RS09170 PF00384 Molybdopterin oxidoreductase INR48_RS09170 PF01568 Molydopterin dinucleotide binding domain INR48_RS09170 PF14710 Respiratory nitrate reductase alpha N-terminal INR48_RS09175 PF14711 Respiratory nitrate reductase beta C-terminal INR48_RS09175 PF13247 4Fe-4S dicluster domain INR48_RS09180 PF02613 Nitrate reductase delta subunit INR48_RS09185 PF02665 Nitrate reductase gamma subunit INR48_RS09210 PF01842 ACT domain INR48_RS09210 PF00551 Formyl transferase INR48_RS09215 PF02810 SEC-C motif INR48_RS09220 PF01734 Patatin-like phospholipase INR48_RS09225 PF00072 Response regulator receiver domain INR48_RS09230 PF00483 Nucleotidyl transferase INR48_RS09235 PF00816 H-NS histone family INR48_RS09240 PF00265 Thymidine kinase INR48_RS09245 PF00465 Iron-containing alcohol dehydrogenase INR48_RS09245 PF00171 Aldehyde dehydrogenase family INR48_RS09250 PF01914 MarC family integral membrane protein INR48_RS09260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INR48_RS09265 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS09270 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS09270 PF12911 N-terminal TM domain of oligopeptide transport permease C INR48_RS09275 PF00005 ABC transporter INR48_RS09275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INR48_RS09280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INR48_RS09280 PF00005 ABC transporter INR48_RS09285 PF04269 Protein of unknown function, DUF440 INR48_RS09290 PF13091 PLD-like domain INR48_RS09290 PF13396 Phospholipase_D-nuclease N-terminal INR48_RS09300 PF02254 TrkA-N domain INR48_RS09300 PF07885 Ion channel INR48_RS09305 PF03795 YCII-related domain INR48_RS09310 PF03544 Gram-negative bacterial TonB protein C-terminal INR48_RS09315 PF03061 Thioesterase superfamily INR48_RS09320 PF04279 Intracellular septation protein A INR48_RS09335 PF03922 OmpW family INR48_RS09340 PF05974 Domain of unknown function (DUF892) INR48_RS09345 PF05974 Domain of unknown function (DUF892) INR48_RS09350 PF10685 Stress-induced bacterial acidophilic repeat motif INR48_RS09355 PF00290 Tryptophan synthase alpha chain INR48_RS09360 PF00291 Pyridoxal-phosphate dependent enzyme INR48_RS09365 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase INR48_RS09365 PF00218 Indole-3-glycerol phosphate synthase INR48_RS09370 PF00591 Glycosyl transferase family, a/b domain INR48_RS09370 PF02885 Glycosyl transferase family, helical bundle domain INR48_RS09370 PF00117 Glutamine amidotransferase class-I INR48_RS09375 PF04715 Anthranilate synthase component I, N terminal region INR48_RS09375 PF00425 chorismate binding enzyme INR48_RS09380 PF08255 Trp-operon Leader Peptide INR48_RS09385 PF02811 PHP domain INR48_RS09390 PF01300 Telomere recombination INR48_RS09395 PF09972 Predicted membrane protein (DUF2207) INR48_RS09400 PF00849 RNA pseudouridylate synthase INR48_RS09400 PF01479 S4 domain INR48_RS09410 PF00106 short chain dehydrogenase INR48_RS09415 PF01343 Peptidase family S49 INR48_RS09415 PF08496 Peptidase family S49 N-terminal INR48_RS09420 PF10692 Protein of unknown function (DUF2498) INR48_RS09425 PF08272 Topoisomerase I zinc-ribbon-like INR48_RS09425 PF01396 Topoisomerase DNA binding C4 zinc finger INR48_RS09425 PF01751 Toprim domain INR48_RS09425 PF01131 DNA topoisomerase INR48_RS09430 PF03466 LysR substrate binding domain INR48_RS09430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS09450 PF00330 Aconitase family (aconitate hydratase) INR48_RS09450 PF00694 Aconitase C-terminal domain INR48_RS09455 PF00925 GTP cyclohydrolase II INR48_RS09460 PF01569 PAP2 superfamily INR48_RS09465 PF06305 Lipopolysaccharide assembly protein A domain INR48_RS09470 PF18073 Rubredoxin metal binding domain INR48_RS09475 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family INR48_RS09480 PF01253 Translation initiation factor SUI1 INR48_RS09485 PF05433 Glycine zipper 2TM domain INR48_RS09490 PF00455 DeoR C terminal sensor domain INR48_RS09490 PF08220 DeoR-like helix-turn-helix domain INR48_RS09500 PF00990 Diguanylate cyclase, GGDEF domain INR48_RS09500 PF13426 PAS domain INR48_RS09500 PF00563 EAL domain INR48_RS09510 PF08206 Ribonuclease B OB domain INR48_RS09510 PF17876 Cold shock domain INR48_RS09510 PF00575 S1 RNA binding domain INR48_RS09510 PF00773 RNB domain INR48_RS09525 PF04480 Protein of unknown function (DUF559) INR48_RS09530 PF00005 ABC transporter INR48_RS09535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INR48_RS09535 PF00005 ABC transporter INR48_RS09540 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS09540 PF12911 N-terminal TM domain of oligopeptide transport permease C INR48_RS09545 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS09550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INR48_RS09555 PF10820 Protein of unknown function (DUF2543) INR48_RS09560 PF00324 Amino acid permease INR48_RS09570 PF00120 Glutamine synthetase, catalytic domain INR48_RS09575 PF07722 Peptidase C26 INR48_RS09580 PF07883 Cupin domain INR48_RS09580 PF01381 Helix-turn-helix INR48_RS09585 PF00171 Aldehyde dehydrogenase family INR48_RS09590 PF01266 FAD dependent oxidoreductase INR48_RS09595 PF00202 Aminotransferase class-III INR48_RS09600 PF02954 Bacterial regulatory protein, Fis family INR48_RS09600 PF00158 Sigma-54 interaction domain INR48_RS09605 PF04012 PspA/IM30 family INR48_RS09610 PF06667 Phage shock protein B INR48_RS09615 PF04024 PspC domain INR48_RS09620 PF09584 Phage shock protein PspD (Phageshock_PspD) INR48_RS09625 PF00581 Rhodanese-like domain INR48_RS09630 PF04317 YcjX-like family, DUF463 INR48_RS09635 PF05128 Domain of unknown function (DUF697) INR48_RS09640 PF18024 Helix-turn-helix domain INR48_RS09640 PF00158 Sigma-54 interaction domain INR48_RS09640 PF13188 PAS domain INR48_RS09645 PF08534 Redoxin INR48_RS09650 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain INR48_RS09650 PF13378 Enolase C-terminal domain-like INR48_RS09655 PF00246 Zinc carboxypeptidase INR48_RS09665 PF12146 Serine aminopeptidase, S33 INR48_RS09670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS09670 PF03466 LysR substrate binding domain INR48_RS09675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INR48_RS09680 PF00924 Mechanosensitive ion channel INR48_RS09685 PF10749 Protein of unknown function (DUF2534) INR48_RS09690 PF00582 Universal stress protein family INR48_RS09695 PF00027 Cyclic nucleotide-binding domain INR48_RS09695 PF00325 Bacterial regulatory proteins, crp family INR48_RS09700 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain INR48_RS09700 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain INR48_RS09705 PF03806 AbgT putative transporter family INR48_RS09710 PF01546 Peptidase family M20/M25/M40 INR48_RS09715 PF01546 Peptidase family M20/M25/M40 INR48_RS09715 PF07687 Peptidase dimerisation domain INR48_RS09720 PF03466 LysR substrate binding domain INR48_RS09720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS09725 PF01713 Smr domain INR48_RS09730 PF00990 Diguanylate cyclase, GGDEF domain INR48_RS09730 PF08448 PAS fold INR48_RS09735 PF01544 CorA-like Mg2+ transporter protein INR48_RS09745 PF03880 DbpA RNA binding domain INR48_RS09745 PF00271 Helicase conserved C-terminal domain INR48_RS09745 PF00270 DEAD/DEAH box helicase INR48_RS09750 PF01171 PP-loop family INR48_RS09755 PF00582 Universal stress protein family INR48_RS09760 PF00267 Gram-negative porin INR48_RS09765 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase INR48_RS09765 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II INR48_RS09765 PF10371 Domain of unknown function INR48_RS09765 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg INR48_RS09765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INR48_RS09770 PF03891 Domain of unknown function (DUF333) INR48_RS09775 PF03724 META domain INR48_RS09780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INR48_RS09780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain INR48_RS09785 PF11739 Dicarboxylate transport INR48_RS09790 PF13617 YnbE-like lipoprotein INR48_RS09795 PF07027 Protein of unknown function (DUF1318) INR48_RS09805 PF00248 Aldo/keto reductase family INR48_RS09810 PF10971 Protein of unknown function (DUF2773) INR48_RS09815 PF01066 CDP-alcohol phosphatidyltransferase INR48_RS09825 PF12146 Serine aminopeptidase, S33 INR48_RS09825 PF12147 Putative methyltransferase INR48_RS09830 PF00782 Dual specificity phosphatase, catalytic domain INR48_RS09835 PF02525 Flavodoxin-like fold INR48_RS09840 PF00271 Helicase conserved C-terminal domain INR48_RS09840 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold INR48_RS09840 PF04408 Helicase associated domain (HA2) INR48_RS09840 PF11898 Domain of unknown function (DUF3418) INR48_RS09840 PF00270 DEAD/DEAH box helicase INR48_RS09855 PF02698 DUF218 domain INR48_RS09860 PF00171 Aldehyde dehydrogenase family INR48_RS09865 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain INR48_RS09865 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain INR48_RS09870 PF01292 Prokaryotic cytochrome b561 INR48_RS09880 PF01848 Hok/gef family INR48_RS09885 PF02203 Tar ligand binding domain homologue INR48_RS09885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INR48_RS09885 PF00672 HAMP domain INR48_RS09890 PF03466 LysR substrate binding domain INR48_RS09890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS09895 PF07063 Domain of unknown function (DUF1338) INR48_RS09900 PF04349 Periplasmic glucan biosynthesis protein, MdoG INR48_RS09905 PF04325 Protein of unknown function (DUF465) INR48_RS09910 PF13302 Acetyltransferase (GNAT) domain INR48_RS09915 PF18836 Beta solenoid repeat from YDCK INR48_RS09920 PF03595 Voltage-dependent anion channel INR48_RS09925 PF03848 Tellurite resistance protein TehB INR48_RS09930 PF11769 Protein of unknown function (DUF3313) INR48_RS09935 PF03594 Benzoate membrane transport protein INR48_RS09940 PF01381 Helix-turn-helix INR48_RS09940 PF07883 Cupin domain INR48_RS09945 PF12392 Collagenase INR48_RS09945 PF01136 Peptidase family U32 INR48_RS09950 PF10829 Protein of unknown function (DUF2554) INR48_RS09955 PF07927 HicA toxin of bacterial toxin-antitoxin, INR48_RS09960 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system INR48_RS09960 PF01381 Helix-turn-helix INR48_RS09965 PF00155 Aminotransferase class I and II INR48_RS09965 PF00392 Bacterial regulatory proteins, gntR family INR48_RS09970 PF13416 Bacterial extracellular solute-binding protein INR48_RS09975 PF08402 TOBE domain INR48_RS09975 PF00005 ABC transporter INR48_RS09980 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS09985 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS09990 PF00171 Aldehyde dehydrogenase family INR48_RS09995 PF00132 Bacterial transferase hexapeptide (six repeats) INR48_RS10005 PF10753 Toxin GhoT_OrtT INR48_RS10010 PF10735 Protein of unknown function (DUF2526) INR48_RS10015 PF04657 Putative inner membrane exporter, YdcZ INR48_RS10020 PF00583 Acetyltransferase (GNAT) family INR48_RS10025 PF16884 N-terminal domain of oxidoreductase INR48_RS10025 PF00107 Zinc-binding dehydrogenase INR48_RS10030 PF00392 Bacterial regulatory proteins, gntR family INR48_RS10030 PF07729 FCD domain INR48_RS10035 PF07715 TonB-dependent Receptor Plug Domain INR48_RS10035 PF00593 TonB dependent receptor INR48_RS10045 PF00324 Amino acid permease INR48_RS10055 PF13417 Glutathione S-transferase, N-terminal domain INR48_RS10065 PF04717 Type VI secretion system, phage-baseplate injector INR48_RS10095 PF01613 Flavin reductase like domain INR48_RS10100 PF00797 N-acetyltransferase INR48_RS10110 PF02567 Phenazine biosynthesis-like protein INR48_RS10115 PF02665 Nitrate reductase gamma subunit INR48_RS10120 PF02613 Nitrate reductase delta subunit INR48_RS10125 PF13247 4Fe-4S dicluster domain INR48_RS10125 PF14711 Respiratory nitrate reductase beta C-terminal INR48_RS10130 PF01568 Molydopterin dinucleotide binding domain INR48_RS10130 PF14710 Respiratory nitrate reductase alpha N-terminal INR48_RS10130 PF00384 Molybdopterin oxidoreductase INR48_RS10135 PF07690 Major Facilitator Superfamily INR48_RS10150 PF00267 Gram-negative porin INR48_RS10155 PF00892 EamA-like transporter family INR48_RS10165 PF12800 4Fe-4S binding domain INR48_RS10165 PF13247 4Fe-4S dicluster domain INR48_RS10165 PF09163 Formate dehydrogenase N, transmembrane INR48_RS10170 PF01292 Prokaryotic cytochrome b561 INR48_RS10175 PF01381 Helix-turn-helix INR48_RS10180 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB INR48_RS10185 PF00107 Zinc-binding dehydrogenase INR48_RS10185 PF08240 Alcohol dehydrogenase GroES-like domain INR48_RS10190 PF03949 Malic enzyme, NAD binding domain INR48_RS10190 PF00390 Malic enzyme, N-terminal domain INR48_RS10195 PF08136 30S ribosomal protein subunit S22 family INR48_RS10200 PF10684 Putative biofilm-dependent modulation protein INR48_RS10205 PF02566 OsmC-like protein INR48_RS10210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INR48_RS10210 PF00005 ABC transporter INR48_RS10215 PF00005 ABC transporter INR48_RS10215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INR48_RS10220 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS10220 PF12911 N-terminal TM domain of oligopeptide transport permease C INR48_RS10225 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS10230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INR48_RS10235 PF01427 D-ala-D-ala dipeptidase INR48_RS10240 PF00990 Diguanylate cyclase, GGDEF domain INR48_RS10240 PF13426 PAS domain INR48_RS10240 PF00563 EAL domain INR48_RS10245 PF00990 Diguanylate cyclase, GGDEF domain INR48_RS10255 PF02638 Glycosyl hydrolase-like 10 INR48_RS10260 PF13520 Amino acid permease INR48_RS10265 PF00282 Pyridoxal-dependent decarboxylase conserved domain INR48_RS10270 PF00675 Insulinase (Peptidase family M16) INR48_RS10270 PF05193 Peptidase M16 inactive domain INR48_RS10275 PF07715 TonB-dependent Receptor Plug Domain INR48_RS10280 PF00005 ABC transporter INR48_RS10280 PF06472 ABC transporter transmembrane region 2 INR48_RS10290 PF04055 Radical SAM superfamily INR48_RS10290 PF13186 Iron-sulfur cluster-binding domain INR48_RS10300 PF12833 Helix-turn-helix domain INR48_RS10305 PF17073 Two-component-system connector protein INR48_RS10310 PF00384 Molybdopterin oxidoreductase INR48_RS10315 PF09160 FimH, mannose binding INR48_RS10320 PF00419 Fimbrial protein INR48_RS10325 PF00419 Fimbrial protein INR48_RS10330 PF00577 Outer membrane usher protein INR48_RS10330 PF13954 PapC N-terminal domain INR48_RS10330 PF13953 PapC C-terminal domain INR48_RS10335 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain INR48_RS10335 PF02753 Pili assembly chaperone PapD, C-terminal domain INR48_RS10340 PF00419 Fimbrial protein INR48_RS10360 PF00248 Aldo/keto reductase family INR48_RS10365 PF02525 Flavodoxin-like fold INR48_RS10385 PF00248 Aldo/keto reductase family INR48_RS10400 PF03466 LysR substrate binding domain INR48_RS10400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS10405 PF07804 HipA-like C-terminal domain INR48_RS10405 PF13657 HipA N-terminal domain INR48_RS10410 PF01381 Helix-turn-helix INR48_RS10415 PF03797 Autotransporter beta-domain INR48_RS10425 PF02782 FGGY family of carbohydrate kinases, C-terminal domain INR48_RS10425 PF00370 FGGY family of carbohydrate kinases, N-terminal domain INR48_RS10430 PF04198 Putative sugar-binding domain INR48_RS10435 PF00005 ABC transporter INR48_RS10440 PF02653 Branched-chain amino acid transport system / permease component INR48_RS10445 PF02653 Branched-chain amino acid transport system / permease component INR48_RS10450 PF13407 Periplasmic binding protein domain INR48_RS10455 PF01791 DeoC/LacD family aldolase INR48_RS10460 PF03992 Antibiotic biosynthesis monooxygenase INR48_RS10465 PF13649 Methyltransferase domain INR48_RS10470 PF01062 Bestrophin, RFP-TM, chloride channel INR48_RS10475 PF01232 Mannitol dehydrogenase Rossmann domain INR48_RS10475 PF08125 Mannitol dehydrogenase C-terminal domain INR48_RS10480 PF00990 Diguanylate cyclase, GGDEF domain INR48_RS10485 PF13811 Domain of unknown function (DUF4186) INR48_RS10490 PF04960 Glutaminase INR48_RS10495 PF00171 Aldehyde dehydrogenase family INR48_RS10500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS10500 PF03466 LysR substrate binding domain INR48_RS10510 PF07690 Major Facilitator Superfamily INR48_RS10515 PF01914 MarC family integral membrane protein INR48_RS10520 PF01047 MarR family INR48_RS10525 PF12833 Helix-turn-helix domain INR48_RS10530 PF13999 MarB protein INR48_RS10535 PF00892 EamA-like transporter family INR48_RS10540 PF07690 Major Facilitator Superfamily INR48_RS10550 PF00990 Diguanylate cyclase, GGDEF domain INR48_RS10555 PF04076 Bacterial OB fold (BOF) protein INR48_RS10560 PF01432 Peptidase family M3 INR48_RS10565 PF00106 short chain dehydrogenase INR48_RS10570 PF07729 FCD domain INR48_RS10570 PF00392 Bacterial regulatory proteins, gntR family INR48_RS10575 PF14001 YdfZ protein INR48_RS10580 PF08125 Mannitol dehydrogenase C-terminal domain INR48_RS10580 PF01232 Mannitol dehydrogenase Rossmann domain INR48_RS10585 PF00083 Sugar (and other) transporter INR48_RS10585 PF07690 Major Facilitator Superfamily INR48_RS10590 PF08240 Alcohol dehydrogenase GroES-like domain INR48_RS10590 PF00107 Zinc-binding dehydrogenase INR48_RS10595 PF13378 Enolase C-terminal domain-like INR48_RS10595 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain INR48_RS10600 PF02694 Uncharacterised BCR, YnfA/UPF0060 family INR48_RS10605 PF06932 Protein of unknown function (DUF1283) INR48_RS10610 PF13302 Acetyltransferase (GNAT) domain INR48_RS10615 PF06788 Uncharacterised protein family (UPF0257) INR48_RS10620 PF06649 Protein of unknown function (DUF1161) INR48_RS10625 PF04879 Molybdopterin oxidoreductase Fe4S4 domain INR48_RS10625 PF01568 Molydopterin dinucleotide binding domain INR48_RS10625 PF00384 Molybdopterin oxidoreductase INR48_RS10630 PF04879 Molybdopterin oxidoreductase Fe4S4 domain INR48_RS10630 PF00384 Molybdopterin oxidoreductase INR48_RS10630 PF01568 Molydopterin dinucleotide binding domain INR48_RS10635 PF13247 4Fe-4S dicluster domain INR48_RS10635 PF12800 4Fe-4S binding domain INR48_RS10640 PF04976 DMSO reductase anchor subunit (DmsC) INR48_RS10645 PF02613 Nitrate reductase delta subunit INR48_RS10650 PF00654 Voltage gated chloride channel INR48_RS10660 PF00480 ROK family INR48_RS10665 PF03466 LysR substrate binding domain INR48_RS10665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS10670 PF07690 Major Facilitator Superfamily INR48_RS10685 PF00089 Trypsin INR48_RS10690 PF00893 Small Multidrug Resistance protein INR48_RS10695 PF00893 Small Multidrug Resistance protein INR48_RS10700 PF01594 AI-2E family transporter INR48_RS10705 PF02233 NAD(P) transhydrogenase beta subunit INR48_RS10710 PF01262 Alanine dehydrogenase/PNT, C-terminal domain INR48_RS10710 PF05222 Alanine dehydrogenase/PNT, N-terminal domain INR48_RS10710 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch INR48_RS10715 PF07338 Protein of unknown function (DUF1471) INR48_RS10720 PF13520 Amino acid permease INR48_RS10730 PF06942 GlpM protein INR48_RS10735 PF00486 Transcriptional regulatory protein, C terminal INR48_RS10735 PF00072 Response regulator receiver domain INR48_RS10740 PF00512 His Kinase A (phospho-acceptor) domain INR48_RS10740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS10740 PF00672 HAMP domain INR48_RS10745 PF05472 DNA replication terminus site-binding protein (Ter protein) INR48_RS10750 PF00206 Lyase INR48_RS10750 PF10415 Fumarase C C-terminus INR48_RS10755 PF05681 Fumarate hydratase (Fumerase) INR48_RS10755 PF05683 Fumarase C-terminus INR48_RS10760 PF01238 Phosphomannose isomerase type I INR48_RS10765 PF06097 Bacterial protein of unknown function (DUF945) INR48_RS10770 PF03573 outer membrane porin, OprD family INR48_RS10780 PF02837 Glycosyl hydrolases family 2, sugar binding domain INR48_RS10780 PF02836 Glycosyl hydrolases family 2, TIM barrel domain INR48_RS10780 PF00703 Glycosyl hydrolases family 2 INR48_RS10785 PF00440 Bacterial regulatory proteins, tetR family INR48_RS10795 PF00356 Bacterial regulatory proteins, lacI family INR48_RS10795 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family INR48_RS10800 PF02378 Phosphotransferase system, EIIC INR48_RS10800 PF00367 phosphotransferase system, EIIB INR48_RS10805 PF00155 Aminotransferase class I and II INR48_RS10810 PF00962 Adenosine/AMP deaminase INR48_RS10815 PF02894 Oxidoreductase family, C-terminal alpha/beta domain INR48_RS10815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold INR48_RS10825 PF05321 Haemolysin expression modulating protein INR48_RS10830 PF10754 Protein of unknown function (DUF2569) INR48_RS10835 PF02508 Rnf-Nqr subunit, membrane protein INR48_RS10840 PF04060 Putative Fe-S cluster INR48_RS10845 PF10531 SLBB domain INR48_RS10845 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit INR48_RS10845 PF12838 4Fe-4S dicluster domain INR48_RS10845 PF13375 RnfC Barrel sandwich hybrid domain INR48_RS10850 PF03116 NQR2, RnfD, RnfE family INR48_RS10855 PF04205 FMN-binding domain INR48_RS10860 PF02508 Rnf-Nqr subunit, membrane protein INR48_RS10865 PF00730 HhH-GPD superfamily base excision DNA repair protein INR48_RS10865 PF00633 Helix-hairpin-helix motif INR48_RS10865 PF10576 Iron-sulfur binding domain of endonuclease III INR48_RS10870 PF00854 POT family INR48_RS10875 PF02798 Glutathione S-transferase, N-terminal domain INR48_RS10875 PF00043 Glutathione S-transferase, C-terminal domain INR48_RS10880 PF08543 Phosphomethylpyrimidine kinase INR48_RS10885 PF01479 S4 domain INR48_RS10885 PF00579 tRNA synthetases class I (W and Y) INR48_RS10890 PF01243 Pyridoxamine 5'-phosphate oxidase INR48_RS10890 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region INR48_RS10895 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme INR48_RS10900 PF03702 Anhydro-N-acetylmuramic acid kinase INR48_RS10905 PF05433 Glycine zipper 2TM domain INR48_RS10910 PF01047 MarR family INR48_RS10915 PF07869 Protein of unknown function (DUF1656) INR48_RS10920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INR48_RS10920 PF00529 HlyD membrane-fusion protein of T1SS INR48_RS10925 PF04632 Fusaric acid resistance protein family INR48_RS10930 PF00080 Copper/zinc superoxide dismutase (SODC) INR48_RS10935 PF00248 Aldo/keto reductase family INR48_RS10940 PF06945 Protein of unknown function (DUF1289) INR48_RS10945 PF00440 Bacterial regulatory proteins, tetR family INR48_RS10945 PF16925 Tetracyclin repressor-like, C-terminal domain INR48_RS10950 PF00724 NADH:flavin oxidoreductase / NADH oxidase family INR48_RS10955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily INR48_RS10960 PF00929 Exonuclease INR48_RS10965 PF00271 Helicase conserved C-terminal domain INR48_RS10965 PF08494 DEAD/H associated INR48_RS10965 PF00270 DEAD/DEAH box helicase INR48_RS10970 PF00462 Glutaredoxin INR48_RS10975 PF00877 NlpC/P60 family INR48_RS10980 PF02777 Iron/manganese superoxide dismutases, C-terminal domain INR48_RS10980 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain INR48_RS10985 PF07690 Major Facilitator Superfamily INR48_RS10995 PF00356 Bacterial regulatory proteins, lacI family INR48_RS11000 PF03466 LysR substrate binding domain INR48_RS11000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS11005 PF07690 Major Facilitator Superfamily INR48_RS11015 PF00677 Lumazine binding domain INR48_RS11020 PF01554 MatE INR48_RS11025 PF03212 Pertactin INR48_RS11025 PF16168 Adhesin of bacterial autotransporter system, probable stalk INR48_RS11040 PF08803 Putative mono-oxygenase ydhR INR48_RS11045 PF13454 FAD-NAD(P)-binding INR48_RS11055 PF01292 Prokaryotic cytochrome b561 INR48_RS11060 PF13247 4Fe-4S dicluster domain INR48_RS11070 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain INR48_RS11070 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 INR48_RS11075 PF13247 4Fe-4S dicluster domain INR48_RS11075 PF12800 4Fe-4S binding domain INR48_RS11080 PF10965 Protein of unknown function (DUF2767) INR48_RS11085 PF00224 Pyruvate kinase, barrel domain INR48_RS11085 PF02887 Pyruvate kinase, alpha/beta domain INR48_RS11090 PF04728 Lipoprotein leucine-zipper INR48_RS11095 PF01476 LysM domain INR48_RS11095 PF17969 L,D-transpeptidase C-terminal domain INR48_RS11095 PF03734 L,D-transpeptidase catalytic domain INR48_RS11100 PF02657 Fe-S metabolism associated domain INR48_RS11105 PF00266 Aminotransferase class-V INR48_RS11110 PF01458 Uncharacterized protein family (UPF0051) INR48_RS11115 PF00005 ABC transporter INR48_RS11120 PF01458 Uncharacterized protein family (UPF0051) INR48_RS11125 PF01521 Iron-sulphur cluster biosynthesis INR48_RS11130 PF15930 Domain of unknown function INR48_RS11135 PF03061 Thioesterase superfamily INR48_RS11140 PF01565 FAD binding domain INR48_RS11140 PF02913 FAD linked oxidases, C-terminal domain INR48_RS11140 PF13183 4Fe-4S dicluster domain INR48_RS11145 PF01594 AI-2E family transporter INR48_RS11155 PF08965 Domain of unknown function (DUF1870) INR48_RS11160 PF07690 Major Facilitator Superfamily INR48_RS11165 PF07690 Major Facilitator Superfamily INR48_RS11170 PF08501 Shikimate dehydrogenase substrate binding domain INR48_RS11170 PF18317 Shikimate 5'-dehydrogenase C-terminal domain INR48_RS11175 PF01487 Type I 3-dehydroquinase INR48_RS11180 PF01144 Coenzyme A transferase INR48_RS11185 PF02770 Acyl-CoA dehydrogenase, middle domain INR48_RS11185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INR48_RS11185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INR48_RS11190 PF02311 AraC-like ligand binding domain INR48_RS11190 PF12833 Helix-turn-helix domain INR48_RS11195 PF01012 Electron transfer flavoprotein domain INR48_RS11200 PF01012 Electron transfer flavoprotein domain INR48_RS11200 PF00766 Electron transfer flavoprotein FAD-binding domain INR48_RS11205 PF01494 FAD binding domain INR48_RS11215 PF13193 AMP-binding enzyme C-terminal domain INR48_RS11215 PF00501 AMP-binding enzyme INR48_RS11220 PF00391 PEP-utilising enzyme, mobile domain INR48_RS11220 PF02896 PEP-utilising enzyme, TIM barrel domain INR48_RS11220 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain INR48_RS11225 PF03618 Kinase/pyrophosphorylase INR48_RS11230 PF00793 DAHP synthetase I family INR48_RS11235 PF10636 Hemin uptake protein hemP INR48_RS11240 PF02696 Uncharacterized ACR, YdiU/UPF0061 family INR48_RS11245 PF00563 EAL domain INR48_RS11250 PF00877 NlpC/P60 family INR48_RS11255 PF00005 ABC transporter INR48_RS11260 PF00255 Glutathione peroxidase INR48_RS11265 PF01032 FecCD transport family INR48_RS11270 PF00216 Bacterial DNA-binding protein INR48_RS11275 PF01588 Putative tRNA binding domain INR48_RS11275 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain INR48_RS11275 PF03147 Ferredoxin-fold anticodon binding domain INR48_RS11275 PF03484 tRNA synthetase B5 domain INR48_RS11275 PF03483 B3/4 domain INR48_RS11280 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain INR48_RS11280 PF01409 tRNA synthetases class II core domain (F) INR48_RS11290 PF00453 Ribosomal protein L20 INR48_RS11295 PF01632 Ribosomal protein L35 INR48_RS11300 PF00707 Translation initiation factor IF-3, C-terminal domain INR48_RS11300 PF05198 Translation initiation factor IF-3, N-terminal domain INR48_RS11305 PF03129 Anticodon binding domain INR48_RS11305 PF02824 TGS domain INR48_RS11305 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) INR48_RS11305 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain INR48_RS11320 PF04338 Protein of unknown function, DUF481 INR48_RS11325 PF00294 pfkB family carbohydrate kinase INR48_RS11330 PF11080 Endoribonuclease GhoS INR48_RS11335 PF03881 Fructosamine kinase INR48_RS11340 PF14002 YniB-like protein INR48_RS11345 PF13419 Haloacid dehalogenase-like hydrolase INR48_RS11350 PF04307 LexA-binding, inner membrane-associated putative hydrolase INR48_RS11355 PF00375 Sodium:dicarboxylate symporter family INR48_RS11365 PF10729 Cell division activator CedA INR48_RS11370 PF00199 Catalase INR48_RS11370 PF18011 C-terminal domain found in long catalases INR48_RS11370 PF06628 Catalase-related immune-responsive INR48_RS11375 PF04794 YdjC-like protein INR48_RS11380 PF11975 Family 4 glycosyl hydrolase C-terminal domain INR48_RS11380 PF02056 Family 4 glycosyl hydrolase INR48_RS11385 PF12833 Helix-turn-helix domain INR48_RS11385 PF07883 Cupin domain INR48_RS11390 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit INR48_RS11395 PF02378 Phosphotransferase system, EIIC INR48_RS11400 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INR48_RS11405 PF04355 SmpA / OmlA family INR48_RS11410 PF02540 NAD synthase INR48_RS11420 PF05962 HutD INR48_RS11425 PF07813 LTXXQ motif family protein INR48_RS11430 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family INR48_RS11435 PF04996 Succinylarginine dihydrolase INR48_RS11440 PF00171 Aldehyde dehydrogenase family INR48_RS11445 PF04958 Arginine N-succinyltransferase beta subunit INR48_RS11450 PF00202 Aminotransferase class-III INR48_RS11455 PF03372 Endonuclease/Exonuclease/phosphatase family INR48_RS11460 PF09335 SNARE associated Golgi protein INR48_RS11470 PF09335 SNARE associated Golgi protein INR48_RS11475 PF02627 Carboxymuconolactone decarboxylase family INR48_RS11480 PF13416 Bacterial extracellular solute-binding protein INR48_RS11485 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS11490 PF00005 ABC transporter INR48_RS11495 PF00581 Rhodanese-like domain INR48_RS11500 PF01066 CDP-alcohol phosphatidyltransferase INR48_RS11505 PF00293 NUDIX domain INR48_RS11510 PF07383 Protein of unknown function (DUF1496) INR48_RS11515 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase INR48_RS11515 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain INR48_RS11520 PF01751 Toprim domain INR48_RS11520 PF01131 DNA topoisomerase INR48_RS11525 PF02769 AIR synthase related protein, C-terminal domain INR48_RS11525 PF00586 AIR synthase related protein, N-terminal domain INR48_RS11530 PF00881 Nitroreductase family INR48_RS11535 PF01343 Peptidase family S49 INR48_RS11540 PF17763 Glutaminase/Asparaginase C-terminal domain INR48_RS11540 PF00710 Asparaginase, N-terminal INR48_RS11545 PF00857 Isochorismatase family INR48_RS11550 PF00083 Sugar (and other) transporter INR48_RS11555 PF08220 DeoR-like helix-turn-helix domain INR48_RS11555 PF00455 DeoR C terminal sensor domain INR48_RS11560 PF00248 Aldo/keto reductase family INR48_RS11565 PF00294 pfkB family carbohydrate kinase INR48_RS11570 PF01116 Fructose-bisphosphate aldolase class-II INR48_RS11575 PF00107 Zinc-binding dehydrogenase INR48_RS11575 PF08240 Alcohol dehydrogenase GroES-like domain INR48_RS11580 PF00083 Sugar (and other) transporter INR48_RS11585 PF08240 Alcohol dehydrogenase GroES-like domain INR48_RS11585 PF00107 Zinc-binding dehydrogenase INR48_RS11590 PF07023 Protein of unknown function (DUF1315) INR48_RS11595 PF01641 SelR domain INR48_RS11600 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain INR48_RS11600 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain INR48_RS11605 PF01263 Aldose 1-epimerase INR48_RS11610 PF00248 Aldo/keto reductase family INR48_RS11615 PF06629 MltA-interacting protein MipA INR48_RS11620 PF06798 PrkA serine protein kinase C-terminal domain INR48_RS11620 PF08298 PrkA AAA domain INR48_RS11625 PF04285 Protein of unknown function (DUF444) INR48_RS11630 PF00990 Diguanylate cyclase, GGDEF domain INR48_RS11630 PF17158 Membrane-associated sensor, integral membrane domain INR48_RS11635 PF17155 Gammaproteobacterial periplasmic sensor domain INR48_RS11635 PF00990 Diguanylate cyclase, GGDEF domain INR48_RS11640 PF04073 Aminoacyl-tRNA editing domain INR48_RS11650 PF04284 Protein of unknown function (DUF441) INR48_RS11655 PF12833 Helix-turn-helix domain INR48_RS11655 PF02311 AraC-like ligand binding domain INR48_RS11660 PF07690 Major Facilitator Superfamily INR48_RS11665 PF04343 Protein of unknown function, DUF488 INR48_RS11670 PF03891 Domain of unknown function (DUF333) INR48_RS11675 PF00990 Diguanylate cyclase, GGDEF domain INR48_RS11675 PF13185 GAF domain INR48_RS11690 PF04226 Transglycosylase associated protein INR48_RS11695 PF08956 Domain of unknown function (DUF1869) INR48_RS11700 PF09313 Domain of unknown function (DUF1971) INR48_RS11705 PF01810 LysE type translocator INR48_RS11710 PF03466 LysR substrate binding domain INR48_RS11710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS11715 PF00180 Isocitrate/isopropylmalate dehydrogenase INR48_RS11720 PF02028 BCCT, betaine/carnitine/choline family transporter INR48_RS11725 PF00848 Ring hydroxylating alpha subunit (catalytic domain) INR48_RS11725 PF00355 Rieske [2Fe-2S] domain INR48_RS11730 PF00970 Oxidoreductase FAD-binding domain INR48_RS11730 PF00175 Oxidoreductase NAD-binding domain INR48_RS11730 PF00111 2Fe-2S iron-sulfur cluster binding domain INR48_RS11735 PF00570 HRDC domain INR48_RS11735 PF01612 3'-5' exonuclease INR48_RS11740 PF13193 AMP-binding enzyme C-terminal domain INR48_RS11740 PF00501 AMP-binding enzyme INR48_RS11745 PF03843 Outer membrane lipoprotein Slp family INR48_RS11750 PF00814 Glycoprotease family INR48_RS11755 PF04851 Type III restriction enzyme, res subunit INR48_RS11755 PF13307 Helicase C-terminal domain INR48_RS11760 PF01042 Endoribonuclease L-PSP INR48_RS11765 PF08986 Domain of unknown function (DUF1889) INR48_RS11770 PF03701 Uncharacterised protein family (UPF0181) INR48_RS11775 PF04715 Anthranilate synthase component I, N terminal region INR48_RS11775 PF00425 chorismate binding enzyme INR48_RS11780 PF00293 NUDIX domain INR48_RS11785 PF03313 Serine dehydratase alpha chain INR48_RS11785 PF03315 Serine dehydratase beta chain INR48_RS11790 PF00563 EAL domain INR48_RS11790 PF12792 CSS motif domain associated with EAL INR48_RS11795 PF03471 Transporter associated domain INR48_RS11795 PF03741 Integral membrane protein TerC family INR48_RS11800 PF03830 PTS system sorbose subfamily IIB component INR48_RS11800 PF03610 PTS system fructose IIA component INR48_RS11805 PF03609 PTS system sorbose-specific iic component INR48_RS11810 PF03613 PTS system mannose/fructose/sorbose family IID component INR48_RS11815 PF06173 Protein of unknown function (DUF986) INR48_RS11820 PF02659 Putative manganese efflux pump INR48_RS11825 PF13847 Methyltransferase domain INR48_RS11830 PF00313 'Cold-shock' DNA-binding domain INR48_RS11835 PF10736 Protein of unknown function (DUF2627) INR48_RS11840 PF13974 YebO-like protein INR48_RS11845 PF13998 MgrB protein INR48_RS11850 PF13996 YobH-like protein INR48_RS11855 PF09339 IclR helix-turn-helix domain INR48_RS11855 PF01614 Bacterial transcriptional regulator INR48_RS11860 PF07690 Major Facilitator Superfamily INR48_RS11865 PF01435 Peptidase family M48 INR48_RS11870 PF03572 Peptidase family S41 INR48_RS11870 PF17804 Tail specific protease N-terminal domain INR48_RS11870 PF11818 C-terminal domain of tail specific protease (DUF3340) INR48_RS11870 PF00595 PDZ domain INR48_RS11875 PF04352 ProQ/FINO family INR48_RS11875 PF17516 ProQ C-terminal domain INR48_RS11880 PF13185 GAF domain INR48_RS11885 PF04403 Paraquat-inducible protein A INR48_RS11890 PF02470 MlaD protein INR48_RS11895 PF01189 16S rRNA methyltransferase RsmB/F INR48_RS11895 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF INR48_RS11895 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF INR48_RS11900 PF07351 Protein of unknown function (DUF1480) INR48_RS11905 PF07358 Protein of unknown function (DUF1482) INR48_RS11910 PF00149 Calcineurin-like phosphoesterase INR48_RS11915 PF10709 Protein of unknown function (DUF2511) INR48_RS11920 PF05425 Copper resistance protein D INR48_RS11925 PF04234 CopC domain INR48_RS11930 PF06440 DNA polymerase III, theta subunit INR48_RS11935 PF00795 Carbon-nitrogen hydrolase INR48_RS11940 PF00929 Exonuclease INR48_RS11945 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain INR48_RS11945 PF00326 Prolyl oligopeptidase family INR48_RS11955 PF12323 Helix-turn-helix domain INR48_RS11960 PF04391 Protein of unknown function (DUF533) INR48_RS11965 PF13995 YebF-like protein INR48_RS11970 PF07130 YebG protein INR48_RS11975 PF02222 ATP-grasp domain INR48_RS11980 PF01081 KDPG and KHG aldolase INR48_RS11985 PF00920 Dehydratase family INR48_RS11990 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain INR48_RS11990 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain INR48_RS11995 PF01418 Helix-turn-helix domain, rpiR family INR48_RS11995 PF01380 SIS domain INR48_RS12000 PF00224 Pyruvate kinase, barrel domain INR48_RS12000 PF02887 Pyruvate kinase, alpha/beta domain INR48_RS12005 PF03279 Bacterial lipid A biosynthesis acyltransferase INR48_RS12010 PF01476 LysM domain INR48_RS12010 PF08525 Opacity-associated protein A N-terminal motif INR48_RS12010 PF01551 Peptidase family M23 INR48_RS12015 PF01297 Zinc-uptake complex component A periplasmic INR48_RS12020 PF00005 ABC transporter INR48_RS12025 PF00950 ABC 3 transport family INR48_RS12030 PF17864 RuvB AAA lid domain INR48_RS12030 PF05496 Holliday junction DNA helicase RuvB P-loop domain INR48_RS12030 PF05491 RuvB C-terminal winged helix domain INR48_RS12035 PF07499 RuvA, C-terminal domain INR48_RS12035 PF01330 RuvA N terminal domain INR48_RS12045 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family INR48_RS12050 PF02075 Crossover junction endodeoxyribonuclease RuvC INR48_RS12055 PF01709 Transcriptional regulator INR48_RS12060 PF00293 NUDIX domain INR48_RS12065 PF02938 GAD domain INR48_RS12065 PF01336 OB-fold nucleic acid binding domain INR48_RS12065 PF00152 tRNA synthetases class II (D, K and N) INR48_RS12070 PF00857 Isochorismatase family INR48_RS12075 PF01904 Protein of unknown function DUF72 INR48_RS12080 PF01124 MAPEG family INR48_RS12085 PF13649 Methyltransferase domain INR48_RS12090 PF08003 Protein of unknown function (DUF1698) INR48_RS12095 PF01568 Molydopterin dinucleotide binding domain INR48_RS12095 PF00384 Molybdopterin oxidoreductase INR48_RS12095 PF18364 Molybdopterin oxidoreductase N-terminal domain INR48_RS12100 PF03264 NapC/NirT cytochrome c family, N-terminal region INR48_RS12105 PF03932 CutC family INR48_RS12110 PF06185 YecM protein INR48_RS12115 PF00750 tRNA synthetases class I (R) INR48_RS12115 PF05746 DALR anticodon binding domain INR48_RS12115 PF03485 Arginyl tRNA synthetase N terminal domain INR48_RS12120 PF06366 Flagellar protein FlhE INR48_RS12125 PF00771 FHIPEP family INR48_RS12130 PF01312 FlhB HrpN YscU SpaS Family INR48_RS12135 PF04344 Chemotaxis phosphatase, CheZ INR48_RS12140 PF00072 Response regulator receiver domain INR48_RS12145 PF01339 CheB methylesterase INR48_RS12145 PF00072 Response regulator receiver domain INR48_RS12150 PF03705 CheR methyltransferase, all-alpha domain INR48_RS12150 PF01739 CheR methyltransferase, SAM binding domain INR48_RS12155 PF02203 Tar ligand binding domain homologue INR48_RS12155 PF00672 HAMP domain INR48_RS12155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INR48_RS12160 PF00672 HAMP domain INR48_RS12160 PF02203 Tar ligand binding domain homologue INR48_RS12160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INR48_RS12165 PF01584 CheW-like domain INR48_RS12170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS12170 PF09078 CheY binding INR48_RS12170 PF01627 Hpt domain INR48_RS12170 PF02895 Signal transducing histidine kinase, homodimeric domain INR48_RS12170 PF01584 CheW-like domain INR48_RS12175 PF13677 Membrane MotB of proton-channel complex MotA/MotB INR48_RS12175 PF00691 OmpA family INR48_RS12180 PF01618 MotA/TolQ/ExbB proton channel family INR48_RS12185 PF05280 Flagellar transcriptional activator (FlhC) INR48_RS12190 PF05247 Flagellar transcriptional activator (FlhD) INR48_RS12195 PF00582 Universal stress protein family INR48_RS12200 PF00982 Glycosyltransferase family 20 INR48_RS12205 PF02358 Trehalose-phosphatase INR48_RS12210 PF02653 Branched-chain amino acid transport system / permease component INR48_RS12215 PF00005 ABC transporter INR48_RS12220 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family INR48_RS12225 PF00210 Ferritin-like domain INR48_RS12230 PF10964 Protein of unknown function (DUF2766) INR48_RS12240 PF13992 YecR-like lipoprotein INR48_RS12245 PF00210 Ferritin-like domain INR48_RS12250 PF10678 Protein of unknown function (DUF2492) INR48_RS12255 PF03222 Tryptophan/tyrosine permease family INR48_RS12260 PF03695 Uncharacterised protein family (UPF0149) INR48_RS12260 PF02810 SEC-C motif INR48_RS12280 PF01066 CDP-alcohol phosphatidyltransferase INR48_RS12285 PF01541 GIY-YIG catalytic domain INR48_RS12285 PF08459 UvrC Helix-hairpin-helix N-terminal INR48_RS12285 PF02151 UvrB/uvrC motif INR48_RS12290 PF00196 Bacterial regulatory proteins, luxR family INR48_RS12290 PF00072 Response regulator receiver domain INR48_RS12300 PF10769 Protein of unknown function (DUF2594) INR48_RS12305 PF03472 Autoinducer binding domain INR48_RS12305 PF00196 Bacterial regulatory proteins, luxR family INR48_RS12310 PF00005 ABC transporter INR48_RS12315 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS12320 PF00291 Pyridoxal-phosphate dependent enzyme INR48_RS12325 PF00497 Bacterial extracellular solute-binding proteins, family 3 INR48_RS12330 PF02899 Phage integrase, N-terminal SAM-like domain INR48_RS12335 PF04539 Sigma-70 region 3 INR48_RS12335 PF04545 Sigma-70, region 4 INR48_RS12335 PF04542 Sigma-70 region 2 INR48_RS12340 PF00700 Bacterial flagellin C-terminal helical region INR48_RS12340 PF00669 Bacterial flagellin N-terminal helical region INR48_RS12340 PF12445 Flagellin protein INR48_RS12345 PF02465 Flagellar hook-associated protein 2 N-terminus INR48_RS12345 PF07195 Flagellar hook-associated protein 2 C-terminus INR48_RS12350 PF02561 Flagellar protein FliS INR48_RS12355 PF05400 Flagellar protein FliT INR48_RS12360 PF02806 Alpha amylase, C-terminal all-beta domain INR48_RS12360 PF00128 Alpha amylase, catalytic domain INR48_RS12365 PF13987 YedD-like protein INR48_RS12370 PF04143 Sulphur transport INR48_RS12375 PF01206 Sulfurtransferase TusA INR48_RS12380 PF02586 SOS response associated peptidase (SRAP) INR48_RS12390 PF17607 Family of unknown function (DUF5503) INR48_RS12395 PF02049 Flagellar hook-basal body complex protein FliE INR48_RS12400 PF08345 Flagellar M-ring protein C-terminal INR48_RS12400 PF01514 Secretory protein of YscJ/FliF family INR48_RS12405 PF14841 FliG middle domain INR48_RS12405 PF01706 FliG C-terminal domain INR48_RS12405 PF14842 FliG N-terminal domain INR48_RS12410 PF02108 Flagellar assembly protein FliH INR48_RS12415 PF18269 T3SS EscN ATPase C-terminal domain INR48_RS12415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain INR48_RS12420 PF02050 Flagellar FliJ protein INR48_RS12425 PF02120 Flagellar hook-length control protein FliK INR48_RS12430 PF03748 Flagellar basal body-associated protein FliL INR48_RS12435 PF02154 Flagellar motor switch protein FliM INR48_RS12435 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term INR48_RS12440 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term INR48_RS12440 PF16973 Flagellar motor switch protein FliN N-terminal INR48_RS12445 PF04347 Flagellar biosynthesis protein, FliO INR48_RS12450 PF00813 FliP family INR48_RS12455 PF01313 Bacterial export proteins, family 3 INR48_RS12460 PF01311 Bacterial export proteins, family 1 INR48_RS12465 PF00196 Bacterial regulatory proteins, luxR family INR48_RS12470 PF10781 Dextransucrase DSRB INR48_RS12475 PF10733 Protein of unknown function (DUF2525) INR48_RS12485 PF00990 Diguanylate cyclase, GGDEF domain INR48_RS12485 PF17151 Periplasmic sensor domain INR48_RS12490 PF09926 Uncharacterized small protein (DUF2158) INR48_RS12495 PF05661 Protein of unknown function (DUF808) INR48_RS12500 PF00892 EamA-like transporter family INR48_RS12505 PF03852 DNA mismatch endonuclease Vsr INR48_RS12510 PF18284 DNA methylase N-terminal domain INR48_RS12510 PF00145 C-5 cytosine-specific DNA methylase INR48_RS12515 PF01966 HD domain INR48_RS12525 PF00267 Gram-negative porin INR48_RS12540 PF00512 His Kinase A (phospho-acceptor) domain INR48_RS12540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS12545 PF00486 Transcriptional regulatory protein, C terminal INR48_RS12545 PF00072 Response regulator receiver domain INR48_RS12550 PF00576 HIUase/Transthyretin family INR48_RS12555 PF00174 Oxidoreductase molybdopterin binding domain INR48_RS12560 PF01794 Ferric reductase like transmembrane component INR48_RS12565 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment INR48_RS12585 PF08400 Prophage tail fibre N-terminal INR48_RS12585 PF03335 Phage tail fibre repeat INR48_RS12585 PF07484 Phage Tail Collar Domain INR48_RS12615 PF06791 Prophage tail length tape measure protein INR48_RS12655 PF03864 Phage major capsid protein E INR48_RS12665 PF01957 NfeD-like C-terminal, partner-binding INR48_RS12665 PF01972 Serine dehydrogenase proteinase INR48_RS12675 PF02831 gpW INR48_RS12680 PF02413 Caudovirales tail fibre assembly protein, lambda gpK INR48_RS12685 PF07471 Phage DNA packaging protein Nu1 INR48_RS12730 PF07041 Protein of unknown function (DUF1327) INR48_RS12745 PF02258 Shiga-like toxin beta subunit INR48_RS12750 PF00161 Ribosome inactivating protein INR48_RS12770 PF12833 Helix-turn-helix domain INR48_RS12795 PF06147 Protein of unknown function (DUF968) INR48_RS12810 PF01848 Hok/gef family INR48_RS12835 PF07789 Protein of unknown function (DUF1627) INR48_RS12860 PF01381 Helix-turn-helix INR48_RS12865 PF07151 Protein of unknown function (DUF1391) INR48_RS12885 PF05358 DicB protein INR48_RS12915 PF06167 Glucose-regulated metallo-peptidase M90 INR48_RS12925 PF11924 Inverse autotransporter, beta-domain INR48_RS12925 PF02369 Bacterial Ig-like domain (group 1) INR48_RS12925 PF09134 Invasin, domain 3 INR48_RS12935 PF07690 Major Facilitator Superfamily INR48_RS12935 PF00083 Sugar (and other) transporter INR48_RS12940 PF01048 Phosphorylase superfamily INR48_RS12940 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus INR48_RS12945 PF01709 Transcriptional regulator INR48_RS12955 PF01554 MatE INR48_RS12965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS12965 PF03466 LysR substrate binding domain INR48_RS12970 PF03466 LysR substrate binding domain INR48_RS12970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS12980 PF03734 L,D-transpeptidase catalytic domain INR48_RS12980 PF17969 L,D-transpeptidase C-terminal domain INR48_RS12985 PF02277 Phosphoribosyltransferase INR48_RS12990 PF02654 Cobalamin-5-phosphate synthase INR48_RS12995 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase INR48_RS13000 PF01890 Cobalamin synthesis G C-terminus INR48_RS13000 PF11760 Cobalamin synthesis G N-terminal INR48_RS13000 PF11761 Cobalamin biosynthesis central region INR48_RS13005 PF12833 Helix-turn-helix domain INR48_RS13005 PF10114 Sensory domain found in PocR INR48_RS13010 PF00230 Major intrinsic protein INR48_RS13015 PF00936 BMC domain INR48_RS13020 PF00936 BMC domain INR48_RS13025 PF02286 Dehydratase large subunit INR48_RS13030 PF02288 Dehydratase medium subunit INR48_RS13035 PF02287 Dehydratase small subunit INR48_RS13040 PF18427 DD-reactivating factor swiveling domain INR48_RS13040 PF08841 Diol dehydratase reactivase ATPase-like domain INR48_RS13050 PF00936 BMC domain INR48_RS13055 PF00936 BMC domain INR48_RS13060 PF06130 Phosphate propanoyltransferase INR48_RS13070 PF03319 Ethanolamine utilisation protein EutN/carboxysome INR48_RS13075 PF01923 Cobalamin adenosyltransferase INR48_RS13080 PF00171 Aldehyde dehydrogenase family INR48_RS13085 PF00465 Iron-containing alcohol dehydrogenase INR48_RS13090 PF13375 RnfC Barrel sandwich hybrid domain INR48_RS13090 PF10531 SLBB domain INR48_RS13090 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit INR48_RS13090 PF13237 4Fe-4S dicluster domain INR48_RS13100 PF00936 BMC domain INR48_RS13105 PF10662 Ethanolamine utilisation - propanediol utilisation INR48_RS13110 PF04363 Protein of unknown function (DUF496) INR48_RS13115 PF04632 Fusaric acid resistance protein family INR48_RS13120 PF06445 GyrI-like small molecule binding domain INR48_RS13125 PF07943 Penicillin-binding protein 5, C-terminal domain INR48_RS13125 PF00768 D-alanyl-D-alanine carboxypeptidase INR48_RS13130 PF08411 Exonuclease C-terminal INR48_RS13130 PF00929 Exonuclease INR48_RS13135 PF13520 Amino acid permease INR48_RS13145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS13145 PF03466 LysR substrate binding domain INR48_RS13150 PF01370 NAD dependent epimerase/dehydratase family INR48_RS13160 PF08029 HisG, C-terminal domain INR48_RS13160 PF01634 ATP phosphoribosyltransferase INR48_RS13165 PF00815 Histidinol dehydrogenase INR48_RS13170 PF00155 Aminotransferase class I and II INR48_RS13175 PF08645 Polynucleotide kinase 3 phosphatase INR48_RS13175 PF00475 Imidazoleglycerol-phosphate dehydratase INR48_RS13180 PF00117 Glutamine amidotransferase class-I INR48_RS13185 PF00977 Histidine biosynthesis protein INR48_RS13190 PF00977 Histidine biosynthesis protein INR48_RS13195 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase INR48_RS13195 PF01502 Phosphoribosyl-AMP cyclohydrolase INR48_RS13200 PF02706 Chain length determinant protein INR48_RS13205 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain INR48_RS13205 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain INR48_RS13205 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain INR48_RS13210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase INR48_RS13210 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain INR48_RS13225 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II INR48_RS13225 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain INR48_RS13225 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I INR48_RS13225 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III INR48_RS13230 PF01050 Mannose-6-phosphate isomerase INR48_RS13230 PF00483 Nucleotidyl transferase INR48_RS13245 PF00483 Nucleotidyl transferase INR48_RS13255 PF00534 Glycosyl transferases group 1 INR48_RS13255 PF13439 Glycosyltransferase Family 4 INR48_RS13260 PF04230 Polysaccharide pyruvyl transferase INR48_RS13270 PF02397 Bacterial sugar transferase INR48_RS13275 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain INR48_RS13275 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III INR48_RS13275 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II INR48_RS13275 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I INR48_RS13280 PF01050 Mannose-6-phosphate isomerase INR48_RS13280 PF00483 Nucleotidyl transferase INR48_RS13285 PF00534 Glycosyl transferases group 1 INR48_RS13285 PF13579 Glycosyl transferase 4-like domain INR48_RS13290 PF00293 NUDIX domain INR48_RS13295 PF01370 NAD dependent epimerase/dehydratase family INR48_RS13300 PF16363 GDP-mannose 4,6 dehydratase INR48_RS13305 PF00132 Bacterial transferase hexapeptide (six repeats) INR48_RS13310 PF00535 Glycosyl transferase family 2 INR48_RS13320 PF13439 Glycosyltransferase Family 4 INR48_RS13320 PF00534 Glycosyl transferases group 1 INR48_RS13325 PF00132 Bacterial transferase hexapeptide (six repeats) INR48_RS13330 PF00535 Glycosyl transferase family 2 INR48_RS13335 PF13614 AAA domain INR48_RS13335 PF02706 Chain length determinant protein INR48_RS13335 PF13807 G-rich domain on putative tyrosine kinase INR48_RS13340 PF01451 Low molecular weight phosphotyrosine protein phosphatase INR48_RS13345 PF02563 Polysaccharide biosynthesis/export protein INR48_RS13345 PF10531 SLBB domain INR48_RS13345 PF18412 Outer-membrane lipoprotein Wza C-terminal domain INR48_RS13355 PF03741 Integral membrane protein TerC family INR48_RS13355 PF03471 Transporter associated domain INR48_RS13355 PF00571 CBS domain INR48_RS13370 PF05170 AsmA family INR48_RS13375 PF00692 dUTPase INR48_RS13380 PF00485 Phosphoribulokinase / Uridine kinase family INR48_RS13385 PF00563 EAL domain INR48_RS13385 PF13426 PAS domain INR48_RS13385 PF00990 Diguanylate cyclase, GGDEF domain INR48_RS13385 PF08447 PAS fold INR48_RS13385 PF08448 PAS fold INR48_RS13385 PF05231 MASE1 INR48_RS13390 PF06029 AlkA N-terminal domain INR48_RS13390 PF00730 HhH-GPD superfamily base excision DNA repair protein INR48_RS13395 PF00012 Hsp70 protein INR48_RS13405 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) INR48_RS13415 PF00092 von Willebrand factor type A domain INR48_RS13440 PF13533 Biotin-lipoyl like INR48_RS13445 PF00873 AcrB/AcrD/AcrF family INR48_RS13450 PF00873 AcrB/AcrD/AcrF family INR48_RS13455 PF07690 Major Facilitator Superfamily INR48_RS13460 PF00672 HAMP domain INR48_RS13460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS13460 PF00512 His Kinase A (phospho-acceptor) domain INR48_RS13465 PF00072 Response regulator receiver domain INR48_RS13465 PF00486 Transcriptional regulatory protein, C terminal INR48_RS13475 PF16325 Peptidase family U32 C-terminal domain INR48_RS13475 PF01136 Peptidase family U32 INR48_RS13485 PF00781 Diacylglycerol kinase catalytic domain INR48_RS13490 PF08220 DeoR-like helix-turn-helix domain INR48_RS13495 PF00107 Zinc-binding dehydrogenase INR48_RS13495 PF08240 Alcohol dehydrogenase GroES-like domain INR48_RS13500 PF03611 PTS system sugar-specific permease component INR48_RS13505 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INR48_RS13510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INR48_RS13515 PF08013 Tagatose 6 phosphate kinase INR48_RS13520 PF01116 Fructose-bisphosphate aldolase class-II INR48_RS13525 PF01791 DeoC/LacD family aldolase INR48_RS13530 PF03825 Nucleoside H+ symporter INR48_RS13535 PF03747 ADP-ribosylglycohydrolase INR48_RS13540 PF00294 pfkB family carbohydrate kinase INR48_RS13545 PF07702 UTRA domain INR48_RS13545 PF00392 Bacterial regulatory proteins, gntR family INR48_RS13550 PF01183 Glycosyl hydrolases family 25 INR48_RS13555 PF08543 Phosphomethylpyrimidine kinase INR48_RS13560 PF02110 Hydroxyethylthiazole kinase family INR48_RS13565 PF02583 Metal-sensitive transcriptional repressor INR48_RS13570 PF03824 High-affinity nickel-transport protein INR48_RS13575 PF11776 Nickel/cobalt transporter regulator INR48_RS13580 PF00419 Fimbrial protein INR48_RS13585 PF00577 Outer membrane usher protein INR48_RS13585 PF13953 PapC C-terminal domain INR48_RS13585 PF13954 PapC N-terminal domain INR48_RS13590 PF02753 Pili assembly chaperone PapD, C-terminal domain INR48_RS13590 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain INR48_RS13595 PF00419 Fimbrial protein INR48_RS13600 PF10836 Protein of unknown function (DUF2574) INR48_RS13605 PF10609 NUBPL iron-transfer P-loop NTPase INR48_RS13610 PF01588 Putative tRNA binding domain INR48_RS13610 PF09334 tRNA synthetases class I (M) INR48_RS13615 PF13569 Domain of unknown function (DUF4132) INR48_RS13620 PF13569 Domain of unknown function (DUF4132) INR48_RS13625 PF13569 Domain of unknown function (DUF4132) INR48_RS13635 PF07728 AAA domain (dynein-related subfamily) INR48_RS13645 PF05762 VWA domain containing CoxE-like protein INR48_RS13650 PF04434 SWIM zinc finger INR48_RS13655 PF06998 Protein of unknown function (DUF1307) INR48_RS13660 PF07308 Protein of unknown function (DUF1456) INR48_RS13665 PF04397 LytTr DNA-binding domain INR48_RS13665 PF00072 Response regulator receiver domain INR48_RS13670 PF07694 5TMR of 5TMR-LYT INR48_RS13670 PF06580 Histidine kinase INR48_RS13675 PF13411 MerR HTH family regulatory protein INR48_RS13685 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS13690 PF00005 ABC transporter INR48_RS13695 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS13700 PF04069 Substrate binding domain of ABC-type glycine betaine transport system INR48_RS13705 PF14310 Fibronectin type III-like domain INR48_RS13705 PF01915 Glycosyl hydrolase family 3 C-terminal domain INR48_RS13705 PF00933 Glycosyl hydrolase family 3 N terminal domain INR48_RS13710 PF01565 FAD binding domain INR48_RS13710 PF09330 D-lactate dehydrogenase, membrane binding INR48_RS13715 PF00768 D-alanyl-D-alanine carboxypeptidase INR48_RS13720 PF04893 Yip1 domain INR48_RS13725 PF09335 SNARE associated Golgi protein INR48_RS13735 PF02321 Outer membrane efflux protein INR48_RS13745 PF01207 Dihydrouridine synthase (Dus) INR48_RS13750 PF03788 LrgA family INR48_RS13755 PF04172 LrgB-like family INR48_RS13760 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region INR48_RS13760 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region INR48_RS13765 PF02698 DUF218 domain INR48_RS13770 PF10808 Protein of unknown function (DUF2542) INR48_RS13775 PF07992 Pyridine nucleotide-disulphide oxidoreductase INR48_RS13775 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster INR48_RS13780 PF01180 Dihydroorotate dehydrogenase INR48_RS13785 PF02653 Branched-chain amino acid transport system / permease component INR48_RS13790 PF00005 ABC transporter INR48_RS13795 PF13407 Periplasmic binding protein domain INR48_RS13800 PF00356 Bacterial regulatory proteins, lacI family INR48_RS13805 PF04235 Protein of unknown function (DUF418) INR48_RS13810 PF01227 GTP cyclohydrolase I INR48_RS13815 PF00756 Putative esterase INR48_RS13820 PF00593 TonB dependent receptor INR48_RS13820 PF07715 TonB-dependent Receptor Plug Domain INR48_RS13825 PF00324 Amino acid permease INR48_RS13830 PF03466 LysR substrate binding domain INR48_RS13830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS13835 PF03601 Conserved hypothetical protein 698 INR48_RS13840 PF01261 Xylose isomerase-like TIM barrel INR48_RS13845 PF00294 pfkB family carbohydrate kinase INR48_RS13850 PF01773 Na+ dependent nucleoside transporter N-terminus INR48_RS13850 PF07662 Na+ dependent nucleoside transporter C-terminus INR48_RS13855 PF01156 Inosine-uridine preferring nucleoside hydrolase INR48_RS13860 PF00027 Cyclic nucleotide-binding domain INR48_RS13865 PF07662 Na+ dependent nucleoside transporter C-terminus INR48_RS13865 PF01773 Na+ dependent nucleoside transporter N-terminus INR48_RS13870 PF04227 Indigoidine synthase A like protein INR48_RS13875 PF00294 pfkB family carbohydrate kinase INR48_RS13880 PF02378 Phosphotransferase system, EIIC INR48_RS13880 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INR48_RS13885 PF00294 pfkB family carbohydrate kinase INR48_RS13890 PF00381 PTS HPr component phosphorylation site INR48_RS13890 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INR48_RS13895 PF07690 Major Facilitator Superfamily INR48_RS13900 PF03692 Putative zinc- or iron-chelating domain INR48_RS13905 PF09285 Elongation factor P, C-terminal INR48_RS13905 PF08207 Elongation factor P (EF-P) KOW-like domain INR48_RS13905 PF01132 Elongation factor P (EF-P) OB domain INR48_RS13910 PF01232 Mannitol dehydrogenase Rossmann domain INR48_RS13910 PF08125 Mannitol dehydrogenase C-terminal domain INR48_RS13915 PF07683 Cobalamin synthesis protein cobW C-terminal domain INR48_RS13915 PF02492 CobW/HypB/UreG, nucleotide-binding domain INR48_RS13920 PF01569 PAP2 superfamily INR48_RS13925 PF00877 NlpC/P60 family INR48_RS13930 PF00563 EAL domain INR48_RS13930 PF12792 CSS motif domain associated with EAL INR48_RS13935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INR48_RS13940 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS13945 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS13945 PF12911 N-terminal TM domain of oligopeptide transport permease C INR48_RS13950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INR48_RS13950 PF00005 ABC transporter INR48_RS13955 PF13989 YejG-like protein INR48_RS13960 PF07690 Major Facilitator Superfamily INR48_RS13965 PF01479 S4 domain INR48_RS13965 PF00849 RNA pseudouridylate synthase INR48_RS13970 PF00271 Helicase conserved C-terminal domain INR48_RS13970 PF04851 Type III restriction enzyme, res subunit INR48_RS13975 PF01386 Ribosomal L25p family INR48_RS13980 PF04245 37-kD nucleoid-associated bacterial protein INR48_RS13985 PF07208 Protein of unknown function (DUF1414) INR48_RS13990 PF11893 Domain of unknown function (DUF3413) INR48_RS13990 PF00884 Sulfatase INR48_RS14000 PF00589 Phage integrase family INR48_RS14000 PF13356 Arm DNA-binding domain INR48_RS14050 PF03864 Phage major capsid protein E INR48_RS14070 PF07471 Phage DNA packaging protein Nu1 INR48_RS14080 PF16168 Adhesin of bacterial autotransporter system, probable stalk INR48_RS14080 PF03797 Autotransporter beta-domain INR48_RS14080 PF03212 Pertactin INR48_RS14085 PF00196 Bacterial regulatory proteins, luxR family INR48_RS14085 PF00072 Response regulator receiver domain INR48_RS14090 PF03918 Cytochrome C biogenesis protein INR48_RS14095 PF08534 Redoxin INR48_RS14100 PF01578 Cytochrome C assembly protein INR48_RS14100 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal INR48_RS14105 PF03100 CcmE INR48_RS14110 PF04995 Heme exporter protein D (CcmD) INR48_RS14115 PF01578 Cytochrome C assembly protein INR48_RS14120 PF03379 CcmB protein INR48_RS14125 PF00005 ABC transporter INR48_RS14130 PF03264 NapC/NirT cytochrome c family, N-terminal region INR48_RS14135 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) INR48_RS14140 PF12801 4Fe-4S binding domain INR48_RS14140 PF13237 4Fe-4S dicluster domain INR48_RS14145 PF12800 4Fe-4S binding domain INR48_RS14145 PF12838 4Fe-4S dicluster domain INR48_RS14150 PF04879 Molybdopterin oxidoreductase Fe4S4 domain INR48_RS14150 PF00384 Molybdopterin oxidoreductase INR48_RS14150 PF01568 Molydopterin dinucleotide binding domain INR48_RS14155 PF03927 NapD protein INR48_RS14160 PF12800 4Fe-4S binding domain INR48_RS14160 PF13187 4Fe-4S dicluster domain INR48_RS14160 PF00037 4Fe-4S binding domain INR48_RS14165 PF03974 Ecotin INR48_RS14170 PF06039 Malate:quinone oxidoreductase (Mqo) INR48_RS14175 PF00005 ABC transporter INR48_RS14180 PF13532 2OG-Fe(II) oxygenase superfamily INR48_RS14185 PF12833 Helix-turn-helix domain INR48_RS14185 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain INR48_RS14185 PF02805 Metal binding domain of Ada INR48_RS14185 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain INR48_RS14190 PF02424 ApbE family INR48_RS14195 PF00267 Gram-negative porin INR48_RS14200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS14200 PF16359 RcsD-ABL domain INR48_RS14200 PF01627 Hpt domain INR48_RS14205 PF00072 Response regulator receiver domain INR48_RS14205 PF00196 Bacterial regulatory proteins, luxR family INR48_RS14210 PF09456 RcsC Alpha-Beta-Loop (ABL) INR48_RS14210 PF00072 Response regulator receiver domain INR48_RS14210 PF00512 His Kinase A (phospho-acceptor) domain INR48_RS14210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS14215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS14215 PF00512 His Kinase A (phospho-acceptor) domain INR48_RS14215 PF00989 PAS fold INR48_RS14220 PF00072 Response regulator receiver domain INR48_RS14220 PF00158 Sigma-54 interaction domain INR48_RS14220 PF02954 Bacterial regulatory protein, Fis family INR48_RS14225 PF01144 Coenzyme A transferase INR48_RS14230 PF01144 Coenzyme A transferase INR48_RS14235 PF02667 Short chain fatty acid transporter INR48_RS14240 PF02803 Thiolase, C-terminal domain INR48_RS14240 PF00108 Thiolase, N-terminal domain INR48_RS14245 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) INR48_RS14250 PF08486 Stage II sporulation protein INR48_RS14250 PF10062 Predicted secreted protein (DUF2300) INR48_RS14255 PF01835 MG2 domain INR48_RS14255 PF07703 Alpha-2-macroglobulin bait region domain INR48_RS14255 PF00207 Alpha-2-macroglobulin family INR48_RS14260 PF06672 Protein of unknown function (DUF1175) INR48_RS14265 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) INR48_RS14270 PF03989 DNA gyrase C-terminal domain, beta-propeller INR48_RS14270 PF00521 DNA gyrase/topoisomerase IV, subunit A INR48_RS14280 PF03797 Autotransporter beta-domain INR48_RS14280 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat INR48_RS14280 PF12951 Passenger-associated-transport-repeat INR48_RS14285 PF03477 ATP cone domain INR48_RS14285 PF02867 Ribonucleotide reductase, barrel domain INR48_RS14285 PF00317 Ribonucleotide reductase, all-alpha domain INR48_RS14290 PF00268 Ribonucleotide reductase, small chain INR48_RS14295 PF00111 2Fe-2S iron-sulfur cluster binding domain INR48_RS14305 PF07690 Major Facilitator Superfamily INR48_RS14310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS14310 PF03466 LysR substrate binding domain INR48_RS14320 PF03009 Glycerophosphoryl diester phosphodiesterase family INR48_RS14325 PF07690 Major Facilitator Superfamily INR48_RS14330 PF01266 FAD dependent oxidoreductase INR48_RS14330 PF04324 BFD-like [2Fe-2S] binding domain INR48_RS14335 PF00890 FAD binding domain INR48_RS14340 PF13183 4Fe-4S dicluster domain INR48_RS14340 PF02754 Cysteine-rich domain INR48_RS14345 PF04754 Putative transposase, YhgA-like INR48_RS14355 PF03328 HpcH/HpaI aldolase/citrate lyase family INR48_RS14360 PF07690 Major Facilitator Superfamily INR48_RS14365 PF12323 Helix-turn-helix domain INR48_RS14365 PF01385 Probable transposase INR48_RS14365 PF07282 Putative transposase DNA-binding domain INR48_RS14375 PF00994 Probable molybdopterin binding domain INR48_RS14380 PF07437 YfaZ precursor INR48_RS14385 PF00293 NUDIX domain INR48_RS14390 PF00300 Histidine phosphatase superfamily (branch 1) INR48_RS14395 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family INR48_RS14400 PF00535 Glycosyl transferase family 2 INR48_RS14405 PF02911 Formyl transferase, C-terminal domain INR48_RS14405 PF01370 NAD dependent epimerase/dehydratase family INR48_RS14405 PF00551 Formyl transferase INR48_RS14410 PF01522 Polysaccharide deacetylase INR48_RS14415 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase INR48_RS14420 PF00892 EamA-like transporter family INR48_RS14435 PF13193 AMP-binding enzyme C-terminal domain INR48_RS14435 PF00501 AMP-binding enzyme INR48_RS14440 PF13378 Enolase C-terminal domain-like INR48_RS14445 PF00378 Enoyl-CoA hydratase/isomerase INR48_RS14450 PF12697 Alpha/beta hydrolase family INR48_RS14455 PF16582 Middle domain of thiamine pyrophosphate INR48_RS14455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INR48_RS14455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INR48_RS14460 PF00425 chorismate binding enzyme INR48_RS14465 PF05957 Bacterial protein of unknown function (DUF883) INR48_RS14470 PF13673 Acetyltransferase (GNAT) domain INR48_RS14475 PF12706 Beta-lactamase superfamily domain INR48_RS14480 PF02902 Ulp1 protease family, C-terminal catalytic domain INR48_RS14485 PF04389 Peptidase family M28 INR48_RS14490 PF08974 Domain of unknown function (DUF1877) INR48_RS14495 PF00361 Proton-conducting membrane transporter INR48_RS14500 PF00361 Proton-conducting membrane transporter INR48_RS14505 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus INR48_RS14505 PF00361 Proton-conducting membrane transporter INR48_RS14510 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L INR48_RS14515 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 INR48_RS14520 PF12838 4Fe-4S dicluster domain INR48_RS14525 PF00146 NADH dehydrogenase INR48_RS14530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain INR48_RS14530 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region INR48_RS14530 PF01568 Molydopterin dinucleotide binding domain INR48_RS14530 PF00384 Molybdopterin oxidoreductase INR48_RS14535 PF10531 SLBB domain INR48_RS14535 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit INR48_RS14535 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region INR48_RS14545 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit INR48_RS14545 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit INR48_RS14550 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit INR48_RS14555 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 INR48_RS14560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS14560 PF03466 LysR substrate binding domain INR48_RS14565 PF00155 Aminotransferase class I and II INR48_RS14575 PF03600 Citrate transporter INR48_RS14575 PF02080 TrkA-C domain INR48_RS14580 PF13419 Haloacid dehalogenase-like hydrolase INR48_RS14585 PF03887 YfbU domain INR48_RS14590 PF04217 Protein of unknown function, DUF412 INR48_RS14595 PF00871 Acetokinase family INR48_RS14600 PF01515 Phosphate acetyl/butaryl transferase INR48_RS14600 PF07085 DRTGG domain INR48_RS14605 PF03606 C4-dicarboxylate anaerobic carrier INR48_RS14610 PF00293 NUDIX domain INR48_RS14615 PF12850 Calcineurin-like phosphoesterase superfamily domain INR48_RS14620 PF14834 Glutathione S-transferase, C-terminal domain INR48_RS14620 PF02798 Glutathione S-transferase, N-terminal domain INR48_RS14625 PF00043 Glutathione S-transferase, C-terminal domain INR48_RS14625 PF02798 Glutathione S-transferase, N-terminal domain INR48_RS14630 PF02152 Dihydroneopterin aldolase INR48_RS14635 PF08338 Domain of unknown function (DUF1731) INR48_RS14635 PF01370 NAD dependent epimerase/dehydratase family INR48_RS14640 PF04754 Putative transposase, YhgA-like INR48_RS14645 PF00005 ABC transporter INR48_RS14650 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS14655 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS14660 PF00497 Bacterial extracellular solute-binding proteins, family 3 INR48_RS14665 PF00497 Bacterial extracellular solute-binding proteins, family 3 INR48_RS14670 PF02441 Flavoprotein INR48_RS14675 PF00156 Phosphoribosyl transferase domain INR48_RS14680 PF02674 Colicin V production protein INR48_RS14685 PF05036 Sporulation related domain INR48_RS14690 PF02875 Mur ligase family, glutamate ligase domain INR48_RS14690 PF08245 Mur ligase middle domain INR48_RS14695 PF01039 Carboxyl transferase domain INR48_RS14695 PF17848 Acetyl-coA carboxylase zinc finger domain INR48_RS14700 PF09335 SNARE associated Golgi protein INR48_RS14705 PF01416 tRNA pseudouridine synthase INR48_RS14710 PF02774 Semialdehyde dehydrogenase, dimerisation domain INR48_RS14710 PF01118 Semialdehyde dehydrogenase, NAD binding domain INR48_RS14715 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain INR48_RS14715 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INR48_RS14715 PF11890 Domain of unknown function (DUF3410) INR48_RS14725 PF07690 Major Facilitator Superfamily INR48_RS14730 PF02801 Beta-ketoacyl synthase, C-terminal domain INR48_RS14730 PF00109 Beta-ketoacyl synthase, N-terminal domain INR48_RS14735 PF05430 S-adenosyl-L-methionine-dependent methyltransferase INR48_RS14735 PF01266 FAD dependent oxidoreductase INR48_RS14740 PF08891 YfcL protein INR48_RS14745 PF04315 Elongation factor P hydroxylase INR48_RS14750 PF01925 Sulfite exporter TauE/SafE INR48_RS14755 PF03411 Penicillin-insensitive murein endopeptidase INR48_RS14760 PF01264 Chorismate synthase INR48_RS14765 PF05175 Methyltransferase small domain INR48_RS14770 PF01713 Smr domain INR48_RS14775 PF11245 Protein of unknown function (DUF2544) INR48_RS14780 PF00419 Fimbrial protein INR48_RS14785 PF00419 Fimbrial protein INR48_RS14790 PF00419 Fimbrial protein INR48_RS14795 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain INR48_RS14795 PF02753 Pili assembly chaperone PapD, C-terminal domain INR48_RS14800 PF00577 Outer membrane usher protein INR48_RS14800 PF13954 PapC N-terminal domain INR48_RS14800 PF13953 PapC C-terminal domain INR48_RS14805 PF00419 Fimbrial protein INR48_RS14810 PF00300 Histidine phosphatase superfamily (branch 1) INR48_RS14815 PF00378 Enoyl-CoA hydratase/isomerase INR48_RS14815 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain INR48_RS14815 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain INR48_RS14820 PF02803 Thiolase, C-terminal domain INR48_RS14820 PF00108 Thiolase, N-terminal domain INR48_RS14825 PF04175 Protein of unknown function (DUF406) INR48_RS14830 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) INR48_RS14840 PF04333 MlaA lipoprotein INR48_RS14845 PF01226 Formate/nitrite transporter INR48_RS14860 PF01306 LacY proton/sugar symporter INR48_RS14865 PF00294 pfkB family carbohydrate kinase INR48_RS14870 PF08244 Glycosyl hydrolases family 32 C terminal INR48_RS14870 PF00251 Glycosyl hydrolases family 32 N-terminal domain INR48_RS14875 PF00356 Bacterial regulatory proteins, lacI family INR48_RS14875 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family INR48_RS14885 PF00291 Pyridoxal-phosphate dependent enzyme INR48_RS14890 PF07690 Major Facilitator Superfamily INR48_RS14895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INR48_RS14895 PF00529 HlyD membrane-fusion protein of T1SS INR48_RS14900 PF00196 Bacterial regulatory proteins, luxR family INR48_RS14900 PF00072 Response regulator receiver domain INR48_RS14905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS14905 PF00072 Response regulator receiver domain INR48_RS14905 PF00497 Bacterial extracellular solute-binding proteins, family 3 INR48_RS14905 PF00512 His Kinase A (phospho-acceptor) domain INR48_RS14910 PF02515 CoA-transferase family III INR48_RS14915 PF03547 Membrane transport protein INR48_RS14920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INR48_RS14920 PF00205 Thiamine pyrophosphate enzyme, central domain INR48_RS14920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INR48_RS14925 PF02515 CoA-transferase family III INR48_RS14930 PF10938 YfdX protein INR48_RS14940 PF10810 Protein of unknown function (DUF2545) INR48_RS14945 PF03279 Bacterial lipid A biosynthesis acyltransferase INR48_RS14955 PF00155 Aminotransferase class I and II INR48_RS14960 PF07694 5TMR of 5TMR-LYT INR48_RS14960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS14960 PF06580 Histidine kinase INR48_RS14965 PF04397 LytTr DNA-binding domain INR48_RS14965 PF00072 Response regulator receiver domain INR48_RS14970 PF12833 Helix-turn-helix domain INR48_RS14975 PF00381 PTS HPr component phosphorylation site INR48_RS14975 PF02896 PEP-utilising enzyme, TIM barrel domain INR48_RS14975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INR48_RS14975 PF00391 PEP-utilising enzyme, mobile domain INR48_RS14975 PF05524 PEP-utilising enzyme, N-terminal INR48_RS14980 PF05343 M42 glutamyl aminopeptidase INR48_RS14985 PF01321 Creatinase/Prolidase N-terminal domain INR48_RS14985 PF00557 Metallopeptidase family M24 INR48_RS14990 PF02378 Phosphotransferase system, EIIC INR48_RS14995 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INR48_RS15000 PF02685 Glucokinase INR48_RS15005 PF00654 Voltage gated chloride channel INR48_RS15010 PF10697 Protein of unknown function (DUF2502) INR48_RS15015 PF01566 Natural resistance-associated macrophage protein INR48_RS15020 PF07662 Na+ dependent nucleoside transporter C-terminus INR48_RS15020 PF07670 Nucleoside recognition INR48_RS15020 PF01773 Na+ dependent nucleoside transporter N-terminus INR48_RS15025 PF05231 MASE1 INR48_RS15025 PF00563 EAL domain INR48_RS15040 PF07037 Putative transcription regulator (DUF1323) INR48_RS15045 PF07037 Putative transcription regulator (DUF1323) INR48_RS15050 PF00749 tRNA synthetases class I (E and Q), catalytic domain INR48_RS15080 PF03466 LysR substrate binding domain INR48_RS15080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS15085 PF13593 SBF-like CPA transporter family (DUF4137) INR48_RS15090 PF12843 Putative quorum-sensing-regulated virulence factor INR48_RS15095 PF00533 BRCA1 C Terminus (BRCT) domain INR48_RS15095 PF01653 NAD-dependent DNA ligase adenylation domain INR48_RS15095 PF03120 NAD-dependent DNA ligase OB-fold domain INR48_RS15095 PF03119 NAD-dependent DNA ligase C4 zinc finger domain INR48_RS15095 PF12826 Helix-hairpin-helix motif INR48_RS15100 PF04354 ZipA, C-terminal FtsZ-binding domain INR48_RS15110 PF00291 Pyridoxal-phosphate dependent enzyme INR48_RS15115 PF00381 PTS HPr component phosphorylation site INR48_RS15120 PF02896 PEP-utilising enzyme, TIM barrel domain INR48_RS15120 PF05524 PEP-utilising enzyme, N-terminal INR48_RS15120 PF00391 PEP-utilising enzyme, mobile domain INR48_RS15125 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 INR48_RS15130 PF08543 Phosphomethylpyrimidine kinase INR48_RS15135 PF17263 Family of unknown function (DUF5329) INR48_RS15140 PF00291 Pyridoxal-phosphate dependent enzyme INR48_RS15145 PF00005 ABC transporter INR48_RS15150 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS15155 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS15170 PF01380 SIS domain INR48_RS15170 PF01418 Helix-turn-helix domain, rpiR family INR48_RS15175 PF01380 SIS domain INR48_RS15180 PF02378 Phosphotransferase system, EIIC INR48_RS15180 PF00367 phosphotransferase system, EIIB INR48_RS15185 PF00144 Beta-lactamase INR48_RS15190 PF04261 Dyp-type peroxidase family INR48_RS15195 PF06572 Protein of unknown function (DUF1131) INR48_RS15200 PF11143 Protein of unknown function (DUF2919) INR48_RS15205 PF00583 Acetyltransferase (GNAT) family INR48_RS15210 PF01520 N-acetylmuramoyl-L-alanine amidase INR48_RS15215 PF01218 Coproporphyrinogen III oxidase INR48_RS15220 PF12833 Helix-turn-helix domain INR48_RS15225 PF00936 BMC domain INR48_RS15225 PF16365 Ethanolamine utilization protein EutK C-terminus INR48_RS15230 PF00936 BMC domain INR48_RS15235 PF05985 Ethanolamine ammonia-lyase light chain (EutC) INR48_RS15240 PF06751 Ethanolamine ammonia lyase large subunit (EutB) INR48_RS15245 PF06277 Ethanolamine utilisation protein EutA INR48_RS15250 PF04346 Ethanolamine utilisation protein, EutH INR48_RS15255 PF00465 Iron-containing alcohol dehydrogenase INR48_RS15265 PF00171 Aldehyde dehydrogenase family INR48_RS15270 PF03319 Ethanolamine utilisation protein EutN/carboxysome INR48_RS15275 PF00936 BMC domain INR48_RS15280 PF01515 Phosphate acetyl/butaryl transferase INR48_RS15285 PF01923 Cobalamin adenosyltransferase INR48_RS15290 PF06249 Ethanolamine utilisation protein EutQ INR48_RS15295 PF10662 Ethanolamine utilisation - propanediol utilisation INR48_RS15300 PF00936 BMC domain INR48_RS15305 PF01515 Phosphate acetyl/butaryl transferase INR48_RS15305 PF03949 Malic enzyme, NAD binding domain INR48_RS15305 PF00390 Malic enzyme, N-terminal domain INR48_RS15310 PF00923 Transaldolase/Fructose-6-phosphate aldolase INR48_RS15315 PF02779 Transketolase, pyrimidine binding domain INR48_RS15315 PF00456 Transketolase, thiamine diphosphate binding domain INR48_RS15315 PF02780 Transketolase, C-terminal domain INR48_RS15320 PF06674 Protein of unknown function (DUF1176) INR48_RS15325 PF00293 NUDIX domain INR48_RS15330 PF07992 Pyridine nucleotide-disulphide oxidoreductase INR48_RS15330 PF13247 4Fe-4S dicluster domain INR48_RS15330 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster INR48_RS15335 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term INR48_RS15335 PF07730 Histidine kinase INR48_RS15335 PF00672 HAMP domain INR48_RS15335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS15340 PF00873 AcrB/AcrD/AcrF family INR48_RS15350 PF03960 ArsC family INR48_RS15355 PF07687 Peptidase dimerisation domain INR48_RS15355 PF01546 Peptidase family M20/M25/M40 INR48_RS15360 PF13980 Uncharacterised protein family (UPF0370) INR48_RS15365 PF02230 Phospholipase/Carboxylesterase INR48_RS15370 PF05127 Helicase INR48_RS15370 PF17176 tRNA-binding domain INR48_RS15370 PF08351 Domain of unknown function (DUF1726) INR48_RS15370 PF13718 GNAT acetyltransferase 2 INR48_RS15375 PF04228 Putative neutral zinc metallopeptidase INR48_RS15380 PF01259 SAICAR synthetase INR48_RS15385 PF06804 NlpB/DapX lipoprotein INR48_RS15390 PF00701 Dihydrodipicolinate synthetase family INR48_RS15395 PF01842 ACT domain INR48_RS15400 PF00578 AhpC/TSA family INR48_RS15405 PF12798 4Fe-4S binding domain INR48_RS15405 PF00037 4Fe-4S binding domain INR48_RS15410 PF00361 Proton-conducting membrane transporter INR48_RS15415 PF00146 NADH dehydrogenase INR48_RS15420 PF00361 Proton-conducting membrane transporter INR48_RS15420 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus INR48_RS15425 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L INR48_RS15430 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus INR48_RS15430 PF00361 Proton-conducting membrane transporter INR48_RS15440 PF12838 4Fe-4S dicluster domain INR48_RS15445 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit INR48_RS15450 PF07450 Formate hydrogenlyase maturation protein HycH INR48_RS15455 PF01590 GAF domain INR48_RS15455 PF00158 Sigma-54 interaction domain INR48_RS15460 PF01226 Formate/nitrite transporter INR48_RS15465 PF01594 AI-2E family transporter INR48_RS15470 PF01435 Peptidase family M48 INR48_RS15475 PF03960 ArsC family INR48_RS15480 PF00308 Bacterial dnaA protein INR48_RS15485 PF00860 Permease family INR48_RS15495 PF02769 AIR synthase related protein, C-terminal domain INR48_RS15495 PF00586 AIR synthase related protein, N-terminal domain INR48_RS15500 PF00551 Formyl transferase INR48_RS15505 PF13089 Polyphosphate kinase N-terminal domain INR48_RS15505 PF13090 Polyphosphate kinase C-terminal domain 2 INR48_RS15505 PF17941 Polyphosphate kinase C-terminal domain 1 INR48_RS15505 PF02503 Polyphosphate kinase middle domain INR48_RS15510 PF02541 Ppx/GppA phosphatase family INR48_RS15515 PF00563 EAL domain INR48_RS15515 PF05231 MASE1 INR48_RS15525 PF11119 Protein of unknown function (DUF2633) INR48_RS15530 PF05433 Glycine zipper 2TM domain INR48_RS15535 PF17358 Family of unknown function (DUF5384) INR48_RS15540 PF01797 Transposase IS200 like INR48_RS15545 PF00117 Glutamine amidotransferase class-I INR48_RS15545 PF00958 GMP synthase C terminal domain INR48_RS15545 PF02540 NAD synthase INR48_RS15550 PF00571 CBS domain INR48_RS15550 PF00478 IMP dehydrogenase / GMP reductase domain INR48_RS15555 PF13742 OB-fold nucleic acid binding domain INR48_RS15555 PF02601 Exonuclease VII, large subunit INR48_RS15570 PF09134 Invasin, domain 3 INR48_RS15570 PF02369 Bacterial Ig-like domain (group 1) INR48_RS15570 PF11924 Inverse autotransporter, beta-domain INR48_RS15570 PF07979 Intimin C-type lectin domain INR48_RS15575 PF07191 zinc-ribbons INR48_RS15580 PF01926 50S ribosome-binding GTPase INR48_RS15580 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal INR48_RS15585 PF13360 PQQ-like domain INR48_RS15590 PF09976 Tetratricopeptide repeat-like domain INR48_RS15595 PF03129 Anticodon binding domain INR48_RS15595 PF13393 Histidyl-tRNA synthetase INR48_RS15600 PF04551 GcpE protein INR48_RS15605 PF13464 Domain of unknown function (DUF4115) INR48_RS15610 PF04055 Radical SAM superfamily INR48_RS15615 PF00334 Nucleoside diphosphate kinase INR48_RS15620 PF00905 Penicillin binding protein transpeptidase domain INR48_RS15620 PF00912 Transglycosylase INR48_RS15620 PF06832 Penicillin-Binding Protein C-terminus Family INR48_RS15625 PF07703 Alpha-2-macroglobulin bait region domain INR48_RS15625 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain INR48_RS15625 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain INR48_RS15625 PF17962 Bacterial macroglobulin domain 6 INR48_RS15625 PF07678 A-macroglobulin TED domain INR48_RS15625 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain INR48_RS15625 PF11974 Bacterial alpha-2-macroglobulin MG3 domain INR48_RS15625 PF00207 Alpha-2-macroglobulin family INR48_RS15625 PF01835 MG2 domain INR48_RS15630 PF00581 Rhodanese-like domain INR48_RS15635 PF07179 SseB protein N-terminal domain INR48_RS15635 PF14581 SseB protein C-terminal domain INR48_RS15640 PF12404 Peptidase INR48_RS15640 PF00883 Cytosol aminopeptidase family, catalytic domain INR48_RS15645 PF04384 Iron-sulphur cluster assembly INR48_RS15650 PF00111 2Fe-2S iron-sulfur cluster binding domain INR48_RS15655 PF00012 Hsp70 protein INR48_RS15660 PF07743 HSCB C-terminal oligomerisation domain INR48_RS15665 PF01521 Iron-sulphur cluster biosynthesis INR48_RS15670 PF01592 NifU-like N terminal domain INR48_RS15675 PF00266 Aminotransferase class-V INR48_RS15680 PF02082 Transcriptional regulator INR48_RS15685 PF00588 SpoU rRNA Methylase family INR48_RS15690 PF00459 Inositol monophosphatase family INR48_RS15695 PF12146 Serine aminopeptidase, S33 INR48_RS15700 PF00874 PRD domain INR48_RS15705 PF12832 MFS_1 like family INR48_RS15710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS15710 PF03466 LysR substrate binding domain INR48_RS15715 PF00848 Ring hydroxylating alpha subunit (catalytic domain) INR48_RS15715 PF00355 Rieske [2Fe-2S] domain INR48_RS15720 PF00866 Ring hydroxylating beta subunit INR48_RS15725 PF00355 Rieske [2Fe-2S] domain INR48_RS15730 PF00106 short chain dehydrogenase INR48_RS15735 PF14759 Reductase C-terminal INR48_RS15735 PF07992 Pyridine nucleotide-disulphide oxidoreductase INR48_RS15740 PF07681 DoxX INR48_RS15745 PF01263 Aldose 1-epimerase INR48_RS15750 PF00107 Zinc-binding dehydrogenase INR48_RS15750 PF08240 Alcohol dehydrogenase GroES-like domain INR48_RS15755 PF02653 Branched-chain amino acid transport system / permease component INR48_RS15760 PF00005 ABC transporter INR48_RS15765 PF13407 Periplasmic binding protein domain INR48_RS15770 PF13181 Tetratricopeptide repeat INR48_RS15770 PF17128 Domain of unknown function (DUF5107) INR48_RS15775 PF00480 ROK family INR48_RS15780 PF00464 Serine hydroxymethyltransferase INR48_RS15785 PF00042 Globin INR48_RS15785 PF00970 Oxidoreductase FAD-binding domain INR48_RS15785 PF00175 Oxidoreductase NAD-binding domain INR48_RS15790 PF00543 Nitrogen regulatory protein P-II INR48_RS15795 PF00072 Response regulator receiver domain INR48_RS15795 PF00158 Sigma-54 interaction domain INR48_RS15800 PF13942 YfhG lipoprotein INR48_RS15805 PF00512 His Kinase A (phospho-acceptor) domain INR48_RS15805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS15810 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain INR48_RS15810 PF02769 AIR synthase related protein, C-terminal domain INR48_RS15810 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal INR48_RS15815 PF00497 Bacterial extracellular solute-binding proteins, family 3 INR48_RS15815 PF01464 Transglycosylase SLT domain INR48_RS15820 PF14437 MafB19-like deaminase INR48_RS15830 PF01418 Helix-turn-helix domain, rpiR family INR48_RS15830 PF01380 SIS domain INR48_RS15835 PF12838 4Fe-4S dicluster domain INR48_RS15845 PF01648 4'-phosphopantetheinyl transferase superfamily INR48_RS15850 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ INR48_RS15855 PF02565 Recombination protein O C terminal INR48_RS15855 PF11967 Recombination protein O N terminal INR48_RS15860 PF01926 50S ribosome-binding GTPase INR48_RS15860 PF07650 KH domain INR48_RS15865 PF14622 Ribonuclease-III-like INR48_RS15865 PF00035 Double-stranded RNA binding motif INR48_RS15870 PF10502 Signal peptidase, peptidase S26 INR48_RS15875 PF00679 Elongation factor G C-terminus INR48_RS15875 PF00009 Elongation factor Tu GTP binding domain INR48_RS15875 PF06421 GTP-binding protein LepA C-terminus INR48_RS15875 PF03144 Elongation factor Tu domain 2 INR48_RS15885 PF17188 MucB/RseB C-terminal domain INR48_RS15885 PF03888 MucB/RseB N-terminal domain INR48_RS15890 PF03873 Anti sigma-E protein RseA, C-terminal domain INR48_RS15890 PF03872 Anti sigma-E protein RseA, N-terminal domain INR48_RS15895 PF04542 Sigma-70 region 2 INR48_RS15895 PF08281 Sigma-70, region 4 INR48_RS15905 PF02910 Fumarate reductase flavoprotein C-term INR48_RS15905 PF00890 FAD binding domain INR48_RS15910 PF05175 Methyltransferase small domain INR48_RS15915 PF00271 Helicase conserved C-terminal domain INR48_RS15915 PF00270 DEAD/DEAH box helicase INR48_RS15925 PF03466 LysR substrate binding domain INR48_RS15925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS15930 PF01810 LysE type translocator INR48_RS15935 PF01228 Glycine radical INR48_RS15940 PF03167 Uracil DNA glycosylase superfamily INR48_RS15945 PF08032 RNA 2'-O ribose methyltransferase substrate binding INR48_RS15945 PF00588 SpoU rRNA Methylase family INR48_RS15950 PF00085 Thioredoxin INR48_RS15955 PF03942 DTW domain INR48_RS15960 PF13380 CoA binding domain INR48_RS15960 PF13607 Succinyl-CoA ligase like flavodoxin domain INR48_RS15960 PF00583 Acetyltransferase (GNAT) family INR48_RS15965 PF13091 PLD-like domain INR48_RS15970 PF10043 Predicted periplasmic lipoprotein (DUF2279) INR48_RS15975 PF00083 Sugar (and other) transporter INR48_RS16000 PF07724 AAA domain (Cdc48 subfamily) INR48_RS16000 PF00004 ATPase family associated with various cellular activities (AAA) INR48_RS16000 PF10431 C-terminal, D2-small domain, of ClpB protein INR48_RS16000 PF02861 Clp amino terminal domain, pathogenicity island component INR48_RS16000 PF17871 AAA lid domain INR48_RS16005 PF02578 Multi-copper polyphenol oxidoreductase laccase INR48_RS16010 PF00849 RNA pseudouridylate synthase INR48_RS16010 PF01479 S4 domain INR48_RS16015 PF13525 Outer membrane lipoprotein INR48_RS16020 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein INR48_RS16030 PF00800 Prephenate dehydratase INR48_RS16030 PF01817 Chorismate mutase type II INR48_RS16035 PF01817 Chorismate mutase type II INR48_RS16035 PF02153 Prephenate dehydrogenase INR48_RS16040 PF00793 DAHP synthetase I family INR48_RS16045 PF10973 Protein of unknown function (DUF2799) INR48_RS16050 PF13689 YfiR/HmsC-like INR48_RS16055 PF17152 Periplasmic sensor domain INR48_RS16055 PF00990 Diguanylate cyclase, GGDEF domain INR48_RS16060 PF00691 OmpA family INR48_RS16065 PF01245 Ribosomal protein L19 INR48_RS16070 PF01746 tRNA (Guanine-1)-methyltransferase INR48_RS16075 PF01782 RimM N-terminal domain INR48_RS16075 PF05239 PRC-barrel domain INR48_RS16080 PF00886 Ribosomal protein S16 INR48_RS16085 PF02881 SRP54-type protein, helical bundle domain INR48_RS16085 PF02978 Signal peptide binding domain INR48_RS16085 PF00448 SRP54-type protein, GTPase domain INR48_RS16090 PF01578 Cytochrome C assembly protein INR48_RS16095 PF00571 CBS domain INR48_RS16095 PF01595 Cyclin M transmembrane N-terminal domain INR48_RS16095 PF03471 Transporter associated domain INR48_RS16100 PF01025 GrpE INR48_RS16105 PF01513 ATP-NAD kinase INR48_RS16110 PF02463 RecF/RecN/SMC N terminal domain INR48_RS16115 PF04355 SmpA / OmlA family INR48_RS16120 PF03658 RnfH family Ubiquitin INR48_RS16125 PF03364 Polyketide cyclase / dehydrase and lipid transport INR48_RS16130 PF01668 SmpB protein INR48_RS16140 PF00589 Phage integrase family INR48_RS16140 PF13356 Arm DNA-binding domain INR48_RS16160 PF12826 Helix-hairpin-helix motif INR48_RS16160 PF00533 BRCA1 C Terminus (BRCT) domain INR48_RS16160 PF01653 NAD-dependent DNA ligase adenylation domain INR48_RS16160 PF03120 NAD-dependent DNA ligase OB-fold domain INR48_RS16160 PF03119 NAD-dependent DNA ligase C4 zinc finger domain INR48_RS16200 PF03608 PTS system enzyme II sorbitol-specific factor INR48_RS16210 PF03612 Sorbitol phosphotransferase enzyme II N-terminus INR48_RS16210 PF07663 Sorbitol phosphotransferase enzyme II C-terminus INR48_RS16215 PF02894 Oxidoreductase family, C-terminal alpha/beta domain INR48_RS16215 PF01408 Oxidoreductase family, NAD-binding Rossmann fold INR48_RS16225 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family INR48_RS16230 PF01380 SIS domain INR48_RS16240 PF02378 Phosphotransferase system, EIIC INR48_RS16240 PF00367 phosphotransferase system, EIIB INR48_RS16240 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 INR48_RS16255 PF01872 RibD C-terminal domain INR48_RS16285 PF16168 Adhesin of bacterial autotransporter system, probable stalk INR48_RS16285 PF03212 Pertactin INR48_RS16285 PF03797 Autotransporter beta-domain INR48_RS16315 PF00128 Alpha amylase, catalytic domain INR48_RS16320 PF08943 CsiD INR48_RS16325 PF01266 FAD dependent oxidoreductase INR48_RS16330 PF00171 Aldehyde dehydrogenase family INR48_RS16335 PF00202 Aminotransferase class-III INR48_RS16340 PF00324 Amino acid permease INR48_RS16345 PF00392 Bacterial regulatory proteins, gntR family INR48_RS16345 PF07729 FCD domain INR48_RS16350 PF01476 LysM domain INR48_RS16350 PF04972 BON domain INR48_RS16355 PF01679 Proteolipid membrane potential modulator INR48_RS16360 PF01022 Bacterial regulatory protein, arsR family INR48_RS16365 PF00581 Rhodanese-like domain INR48_RS16365 PF11127 Protein of unknown function (DUF2892) INR48_RS16370 PF00816 H-NS histone family INR48_RS16375 PF06610 L-alanine exporter INR48_RS16380 PF09400 Protein of unknown function (DUF2002) INR48_RS16385 PF05957 Bacterial protein of unknown function (DUF883) INR48_RS16390 PF00155 Aminotransferase class I and II INR48_RS16390 PF00392 Bacterial regulatory proteins, gntR family INR48_RS16395 PF02627 Carboxymuconolactone decarboxylase family INR48_RS16400 PF00462 Glutaredoxin INR48_RS16405 PF07972 NrdI Flavodoxin like INR48_RS16410 PF08343 Ribonucleotide reductase N-terminal INR48_RS16410 PF02867 Ribonucleotide reductase, barrel domain INR48_RS16410 PF00317 Ribonucleotide reductase, all-alpha domain INR48_RS16415 PF00268 Ribonucleotide reductase, small chain INR48_RS16420 PF00571 CBS domain INR48_RS16420 PF00005 ABC transporter INR48_RS16425 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS16430 PF04069 Substrate binding domain of ABC-type glycine betaine transport system INR48_RS16435 PF07690 Major Facilitator Superfamily INR48_RS16440 PF03591 AzlC protein INR48_RS16445 PF05437 Branched-chain amino acid transport protein (AzlD) INR48_RS16450 PF01047 MarR family INR48_RS16455 PF00529 HlyD membrane-fusion protein of T1SS INR48_RS16455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INR48_RS16460 PF07690 Major Facilitator Superfamily INR48_RS16465 PF02664 S-Ribosylhomocysteinase (LuxS) INR48_RS16470 PF04262 Glutamate-cysteine ligase INR48_RS16475 PF09335 SNARE associated Golgi protein INR48_RS16480 PF13419 Haloacid dehalogenase-like hydrolase INR48_RS16510 PF02599 Global regulator protein family INR48_RS16515 PF02272 DHHA1 domain INR48_RS16515 PF01411 tRNA synthetases class II (A) INR48_RS16515 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain INR48_RS16520 PF02631 RecX family INR48_RS16525 PF00154 recA bacterial DNA recombination protein INR48_RS16530 PF02464 Competence-damaged protein INR48_RS16535 PF13406 Transglycosylase SLT domain INR48_RS16540 PF03608 PTS system enzyme II sorbitol-specific factor INR48_RS16545 PF07663 Sorbitol phosphotransferase enzyme II C-terminus INR48_RS16545 PF03612 Sorbitol phosphotransferase enzyme II N-terminus INR48_RS16550 PF03829 PTS system glucitol/sorbitol-specific IIA component INR48_RS16555 PF00106 short chain dehydrogenase INR48_RS16560 PF06923 Glucitol operon activator protein (GutM) INR48_RS16565 PF08220 DeoR-like helix-turn-helix domain INR48_RS16565 PF00455 DeoR C terminal sensor domain INR48_RS16570 PF01380 SIS domain INR48_RS16570 PF00571 CBS domain INR48_RS16575 PF00158 Sigma-54 interaction domain INR48_RS16575 PF01590 GAF domain INR48_RS16580 PF00258 Flavodoxin INR48_RS16580 PF00301 Rubredoxin INR48_RS16580 PF00753 Metallo-beta-lactamase superfamily INR48_RS16585 PF07992 Pyridine nucleotide-disulphide oxidoreductase INR48_RS16585 PF18113 Rubredoxin binding C-terminal domain INR48_RS16590 PF07503 HypF finger INR48_RS16590 PF01300 Telomere recombination INR48_RS16590 PF17788 HypF Kae1-like domain INR48_RS16590 PF00708 Acylphosphatase INR48_RS16595 PF13247 4Fe-4S dicluster domain INR48_RS16595 PF12800 4Fe-4S binding domain INR48_RS16600 PF00356 Bacterial regulatory proteins, lacI family INR48_RS16605 PF02378 Phosphotransferase system, EIIC INR48_RS16605 PF00367 phosphotransferase system, EIIB INR48_RS16610 PF00232 Glycosyl hydrolase family 1 INR48_RS16615 PF01750 Hydrogenase maturation protease INR48_RS16620 PF07450 Formate hydrogenlyase maturation protein HycH INR48_RS16625 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit INR48_RS16630 PF12838 4Fe-4S dicluster domain INR48_RS16635 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit INR48_RS16635 PF00374 Nickel-dependent hydrogenase INR48_RS16635 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit INR48_RS16640 PF00146 NADH dehydrogenase INR48_RS16645 PF00361 Proton-conducting membrane transporter INR48_RS16650 PF13247 4Fe-4S dicluster domain INR48_RS16655 PF11046 Transcriptional repressor of hyc and hyp operons INR48_RS16660 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA INR48_RS16665 PF02492 CobW/HypB/UreG, nucleotide-binding domain INR48_RS16670 PF01455 HupF/HypC family INR48_RS16675 PF01924 Hydrogenase formation hypA family INR48_RS16680 PF00586 AIR synthase related protein, N-terminal domain INR48_RS16680 PF02769 AIR synthase related protein, C-terminal domain INR48_RS16685 PF01590 GAF domain INR48_RS16685 PF00158 Sigma-54 interaction domain INR48_RS16695 PF11756 Nitrous oxide-stimulated promoter INR48_RS16705 PF01624 MutS domain I INR48_RS16705 PF05188 MutS domain II INR48_RS16705 PF05192 MutS domain III INR48_RS16705 PF05190 MutS family domain IV INR48_RS16705 PF00488 MutS domain V INR48_RS16725 PF00149 Calcineurin-like phosphoesterase INR48_RS16735 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase INR48_RS16740 PF02441 Flavoprotein INR48_RS16745 PF01047 MarR family INR48_RS16750 PF04545 Sigma-70, region 4 INR48_RS16750 PF00140 Sigma-70 factor, region 1.2 INR48_RS16750 PF04539 Sigma-70 region 3 INR48_RS16750 PF04542 Sigma-70 region 2 INR48_RS16755 PF01551 Peptidase family M23 INR48_RS16755 PF01476 LysM domain INR48_RS16765 PF01975 Survival protein SurE INR48_RS16770 PF01142 tRNA pseudouridine synthase D (TruD) INR48_RS16775 PF02542 YgbB family INR48_RS16780 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase INR48_RS16785 PF04977 Septum formation initiator INR48_RS16790 PF12084 Protein of unknown function (DUF3561) INR48_RS16800 PF00009 Elongation factor Tu GTP binding domain INR48_RS16805 PF01507 Phosphoadenosine phosphosulfate reductase family INR48_RS16810 PF04389 Peptidase family M28 INR48_RS16815 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) INR48_RS16830 PF09704 CRISPR-associated protein (Cas_Cas5) INR48_RS16835 PF09344 CT1975-like protein INR48_RS16845 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) INR48_RS16850 PF18019 HD domain INR48_RS16850 PF00270 DEAD/DEAH box helicase INR48_RS16850 PF00271 Helicase conserved C-terminal domain INR48_RS16855 PF01848 Hok/gef family INR48_RS16860 PF01507 Phosphoadenosine phosphosulfate reductase family INR48_RS16865 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain INR48_RS16865 PF01077 Nitrite and sulphite reductase 4Fe-4S domain INR48_RS16870 PF00667 FAD binding domain INR48_RS16870 PF00175 Oxidoreductase NAD-binding domain INR48_RS16870 PF00258 Flavodoxin INR48_RS16875 PF01242 6-pyruvoyl tetrahydropterin synthase INR48_RS16880 PF01266 FAD dependent oxidoreductase INR48_RS16890 PF04309 Glycerol-3-phosphate responsive antiterminator INR48_RS16895 PF00766 Electron transfer flavoprotein FAD-binding domain INR48_RS16895 PF01012 Electron transfer flavoprotein domain INR48_RS16900 PF01012 Electron transfer flavoprotein domain INR48_RS16905 PF00083 Sugar (and other) transporter INR48_RS16910 PF02913 FAD linked oxidases, C-terminal domain INR48_RS16910 PF01565 FAD binding domain INR48_RS16920 PF07690 Major Facilitator Superfamily INR48_RS16925 PF02782 FGGY family of carbohydrate kinases, C-terminal domain INR48_RS16925 PF00370 FGGY family of carbohydrate kinases, N-terminal domain INR48_RS16930 PF04055 Radical SAM superfamily INR48_RS16940 PF04536 TPM domain INR48_RS16950 PF04536 TPM domain INR48_RS16955 PF03952 Enolase, N-terminal domain INR48_RS16955 PF00113 Enolase, C-terminal TIM barrel domain INR48_RS16960 PF00117 Glutamine amidotransferase class-I INR48_RS16960 PF06418 CTP synthase N-terminus INR48_RS16965 PF03819 MazG nucleotide pyrophosphohydrolase domain INR48_RS16970 PF02824 TGS domain INR48_RS16970 PF04607 Region found in RelA / SpoT proteins INR48_RS16970 PF13291 ACT domain INR48_RS16975 PF01938 TRAM domain INR48_RS16975 PF05958 tRNA (Uracil-5-)-methyltransferase INR48_RS16980 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) INR48_RS16980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS16980 PF00512 His Kinase A (phospho-acceptor) domain INR48_RS16980 PF00072 Response regulator receiver domain INR48_RS16980 PF01627 Hpt domain INR48_RS16980 PF00672 HAMP domain INR48_RS16985 PF13378 Enolase C-terminal domain-like INR48_RS16990 PF13378 Enolase C-terminal domain-like INR48_RS16990 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain INR48_RS16995 PF07690 Major Facilitator Superfamily INR48_RS17000 PF00258 Flavodoxin INR48_RS17005 PF00849 RNA pseudouridylate synthase INR48_RS17010 PF04287 tRNA pseudouridine synthase C INR48_RS17015 PF07348 Syd protein (SUKH-2) INR48_RS17020 PF14489 QueF-like protein INR48_RS17020 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term INR48_RS17025 PF11892 Domain of unknown function (DUF3412) INR48_RS17025 PF03641 Possible lysine decarboxylase INR48_RS17025 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases INR48_RS17035 PF03315 Serine dehydratase beta chain INR48_RS17035 PF03313 Serine dehydratase alpha chain INR48_RS17040 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain INR48_RS17040 PF01367 5'-3' exonuclease, C-terminal SAM fold INR48_RS17045 PF00465 Iron-containing alcohol dehydrogenase INR48_RS17050 PF00596 Class II Aldolase and Adducin N-terminal domain INR48_RS17055 PF07690 Major Facilitator Superfamily INR48_RS17060 PF07882 L-fucose isomerase, second N-terminal domain INR48_RS17060 PF07881 L-fucose isomerase, first N-terminal domain INR48_RS17060 PF02952 L-fucose isomerase, C-terminal domain INR48_RS17065 PF00370 FGGY family of carbohydrate kinases, N-terminal domain INR48_RS17065 PF02782 FGGY family of carbohydrate kinases, C-terminal domain INR48_RS17070 PF05025 RbsD / FucU transport protein family INR48_RS17075 PF00455 DeoR C terminal sensor domain INR48_RS17075 PF08220 DeoR-like helix-turn-helix domain INR48_RS17080 PF18125 RlmM ferredoxin-like domain INR48_RS17080 PF01728 FtsJ-like methyltransferase INR48_RS17085 PF04241 Protein of unknown function (DUF423) INR48_RS17090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS17090 PF03466 LysR substrate binding domain INR48_RS17095 PF06004 Bacterial protein of unknown function (DUF903) INR48_RS17100 PF00266 Aminotransferase class-V INR48_RS17105 PF02657 Fe-S metabolism associated domain INR48_RS17110 PF00899 ThiF family INR48_RS17115 PF03562 MltA specific insert domain INR48_RS17115 PF06725 3D domain INR48_RS17135 PF01520 N-acetylmuramoyl-L-alanine amidase INR48_RS17135 PF11741 AMIN domain INR48_RS17140 PF00583 Acetyltransferase (GNAT) family INR48_RS17140 PF00696 Amino acid kinase family INR48_RS17145 PF13538 UvrD-like helicase C-terminal domain INR48_RS17150 PF00580 UvrD/REP helicase N-terminal domain INR48_RS17150 PF12705 PD-(D/E)XK nuclease superfamily INR48_RS17150 PF13361 UvrD-like helicase C-terminal domain INR48_RS17155 PF16187 Middle or third domain of peptidase_M16 INR48_RS17155 PF00675 Insulinase (Peptidase family M16) INR48_RS17155 PF05193 Peptidase M16 inactive domain INR48_RS17160 PF17946 RecC C-terminal domain INR48_RS17165 PF07963 Prokaryotic N-terminal methylation motif INR48_RS17165 PF12528 Type II secretion prepilin peptidase dependent protein C INR48_RS17170 PF10713 Protein of unknown function (DUF2509) INR48_RS17175 PF07963 Prokaryotic N-terminal methylation motif INR48_RS17180 PF07963 Prokaryotic N-terminal methylation motif INR48_RS17185 PF00303 Thymidylate synthase INR48_RS17190 PF01790 Prolipoprotein diacylglyceryl transferase INR48_RS17195 PF02896 PEP-utilising enzyme, TIM barrel domain INR48_RS17195 PF01590 GAF domain INR48_RS17195 PF05524 PEP-utilising enzyme, N-terminal INR48_RS17195 PF00391 PEP-utilising enzyme, mobile domain INR48_RS17200 PF00293 NUDIX domain INR48_RS17205 PF02976 DNA mismatch repair enzyme MutH INR48_RS17210 PF03741 Integral membrane protein TerC family INR48_RS17215 PF06004 Bacterial protein of unknown function (DUF903) INR48_RS17220 PF00248 Aldo/keto reductase family INR48_RS17225 PF07690 Major Facilitator Superfamily INR48_RS17230 PF00501 AMP-binding enzyme INR48_RS17230 PF01553 Acyltransferase INR48_RS17235 PF00356 Bacterial regulatory proteins, lacI family INR48_RS17240 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain INR48_RS17240 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain INR48_RS17245 PF03466 LysR substrate binding domain INR48_RS17245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS17250 PF01177 Asp/Glu/Hydantoin racemase INR48_RS17255 PF00083 Sugar (and other) transporter INR48_RS17265 PF04962 KduI/IolB family INR48_RS17275 PF03222 Tryptophan/tyrosine permease family INR48_RS17280 PF00196 Bacterial regulatory proteins, luxR family INR48_RS17285 PF00486 Transcriptional regulatory protein, C terminal INR48_RS17310 PF07720 Tetratricopeptide repeat INR48_RS17315 PF00486 Transcriptional regulatory protein, C terminal INR48_RS17325 PF01464 Transglycosylase SLT domain INR48_RS17330 PF00072 Response regulator receiver domain INR48_RS17330 PF00196 Bacterial regulatory proteins, luxR family INR48_RS17340 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) INR48_RS17345 PF01514 Secretory protein of YscJ/FliF family INR48_RS17355 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF INR48_RS17360 PF09480 Type III secretion system protein PrgH-EprH (PrgH) INR48_RS17375 PF01312 FlhB HrpN YscU SpaS Family INR48_RS17380 PF01311 Bacterial export proteins, family 1 INR48_RS17385 PF01313 Bacterial export proteins, family 3 INR48_RS17390 PF00813 FliP family INR48_RS17395 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term INR48_RS17410 PF18269 T3SS EscN ATPase C-terminal domain INR48_RS17410 PF02874 ATP synthase alpha/beta family, beta-barrel domain INR48_RS17410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain INR48_RS17415 PF00771 FHIPEP family INR48_RS17420 PF07201 HrpJ-like domain INR48_RS17425 PF03958 Bacterial type II/III secretion system short domain INR48_RS17425 PF00263 Bacterial type II and III secretion system protein INR48_RS17430 PF12833 Helix-turn-helix domain INR48_RS17450 PF01476 LysM domain INR48_RS17450 PF01551 Peptidase family M23 INR48_RS17455 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase INR48_RS17455 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain INR48_RS17460 PF03450 CO dehydrogenase flavoprotein C-terminal domain INR48_RS17460 PF00941 FAD binding domain in molybdopterin dehydrogenase INR48_RS17465 PF00111 2Fe-2S iron-sulfur cluster binding domain INR48_RS17465 PF01799 [2Fe-2S] binding domain INR48_RS17470 PF02954 Bacterial regulatory protein, Fis family INR48_RS17470 PF00158 Sigma-54 interaction domain INR48_RS17470 PF13188 PAS domain INR48_RS17475 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain INR48_RS17475 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain INR48_RS17480 PF00291 Pyridoxal-phosphate dependent enzyme INR48_RS17485 PF01546 Peptidase family M20/M25/M40 INR48_RS17485 PF07687 Peptidase dimerisation domain INR48_RS17490 PF01979 Amidohydrolase family INR48_RS17495 PF00696 Amino acid kinase family INR48_RS17500 PF13478 XdhC Rossmann domain INR48_RS17500 PF02625 XdhC and CoxI family INR48_RS17510 PF12804 MobA-like NTP transferase domain INR48_RS17515 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster INR48_RS17515 PF07992 Pyridine nucleotide-disulphide oxidoreductase INR48_RS17520 PF01979 Amidohydrolase family INR48_RS17525 PF00941 FAD binding domain in molybdopterin dehydrogenase INR48_RS17530 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase INR48_RS17530 PF01799 [2Fe-2S] binding domain INR48_RS17530 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain INR48_RS17535 PF00860 Permease family INR48_RS17540 PF01979 Amidohydrolase family INR48_RS17545 PF00860 Permease family INR48_RS17550 PF13247 4Fe-4S dicluster domain INR48_RS17560 PF13247 4Fe-4S dicluster domain INR48_RS17565 PF13247 4Fe-4S dicluster domain INR48_RS17565 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster INR48_RS17565 PF07992 Pyridine nucleotide-disulphide oxidoreductase INR48_RS17570 PF00860 Permease family INR48_RS17585 PF00293 NUDIX domain INR48_RS17590 PF00152 tRNA synthetases class II (D, K and N) INR48_RS17590 PF01336 OB-fold nucleic acid binding domain INR48_RS17600 PF17768 RecJ OB domain INR48_RS17600 PF02272 DHHA1 domain INR48_RS17600 PF01368 DHH family INR48_RS17605 PF10411 Disulfide bond isomerase protein N-terminus INR48_RS17605 PF13098 Thioredoxin-like domain INR48_RS17610 PF00589 Phage integrase family INR48_RS17610 PF02899 Phage integrase, N-terminal SAM-like domain INR48_RS17615 PF00258 Flavodoxin INR48_RS17620 PF07254 Membrane-bound toxin component of toxin-antitoxin system INR48_RS17625 PF03937 Flavinator of succinate dehydrogenase INR48_RS17630 PF01571 Aminomethyltransferase folate-binding domain INR48_RS17635 PF03006 Haemolysin-III related INR48_RS17640 PF04266 ASCH domain INR48_RS17645 PF00232 Glycosyl hydrolase family 1 INR48_RS17655 PF02347 Glycine cleavage system P-protein INR48_RS17660 PF01597 Glycine cleavage H-protein INR48_RS17665 PF08669 Glycine cleavage T-protein C-terminal barrel domain INR48_RS17665 PF01571 Aminomethyltransferase folate-binding domain INR48_RS17675 PF01494 FAD binding domain INR48_RS17680 PF01494 FAD binding domain INR48_RS17685 PF00557 Metallopeptidase family M24 INR48_RS17685 PF05195 Aminopeptidase P, N-terminal domain INR48_RS17690 PF03695 Uncharacterised protein family (UPF0149) INR48_RS17695 PF05164 Cell division protein ZapA INR48_RS17705 PF01812 5-formyltetrahydrofolate cyclo-ligase family INR48_RS17715 PF01842 ACT domain INR48_RS17715 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INR48_RS17715 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain INR48_RS17720 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) INR48_RS17725 PF03466 LysR substrate binding domain INR48_RS17730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS17730 PF03466 LysR substrate binding domain INR48_RS17735 PF01642 Methylmalonyl-CoA mutase INR48_RS17735 PF02310 B12 binding domain INR48_RS17745 PF00378 Enoyl-CoA hydratase/isomerase INR48_RS17750 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain INR48_RS17750 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain INR48_RS17755 PF03466 LysR substrate binding domain INR48_RS17755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS17760 PF04402 Protein of unknown function (DUF541) INR48_RS17765 PF01810 LysE type translocator INR48_RS17770 PF05552 Conserved TM helix INR48_RS17770 PF00924 Mechanosensitive ion channel INR48_RS17775 PF01116 Fructose-bisphosphate aldolase class-II INR48_RS17780 PF00162 Phosphoglycerate kinase INR48_RS17785 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain INR48_RS17785 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain INR48_RS17795 PF05068 Mannitol repressor INR48_RS17800 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded INR48_RS17805 PF08240 Alcohol dehydrogenase GroES-like domain INR48_RS17805 PF00107 Zinc-binding dehydrogenase INR48_RS17810 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INR48_RS17810 PF02378 Phosphotransferase system, EIIC INR48_RS17815 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INR48_RS17820 PF00456 Transketolase, thiamine diphosphate binding domain INR48_RS17820 PF02780 Transketolase, C-terminal domain INR48_RS17820 PF02779 Transketolase, pyrimidine binding domain INR48_RS17825 PF01435 Peptidase family M48 INR48_RS17830 PF00491 Arginase family INR48_RS17835 PF17810 Arginine decarboxylase helical bundle domain INR48_RS17835 PF17944 Arginine decarboxylase C-terminal helical extension INR48_RS17835 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain INR48_RS17840 PF11036 Virulence promoting factor INR48_RS17845 PF17430 Uncharacterized YqgC-like INR48_RS17850 PF02772 S-adenosylmethionine synthetase, central domain INR48_RS17850 PF00438 S-adenosylmethionine synthetase, N-terminal domain INR48_RS17850 PF02773 S-adenosylmethionine synthetase, C-terminal domain INR48_RS17855 PF00083 Sugar (and other) transporter INR48_RS17860 PF10263 SprT-like family INR48_RS17860 PF17283 SprT-like zinc ribbon domain INR48_RS17865 PF04231 Endonuclease I INR48_RS17870 PF04452 RNA methyltransferase INR48_RS17875 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain INR48_RS17875 PF02951 Prokaryotic glutathione synthetase, N-terminal domain INR48_RS17880 PF02622 Uncharacterized ACR, COG1678 INR48_RS17885 PF03652 Holliday junction resolvase INR48_RS17890 PF00437 Type II/IV secretion system protein INR48_RS17895 PF01168 Alanine racemase, N-terminal domain INR48_RS17900 PF02325 YGGT family INR48_RS17905 PF02594 Uncharacterised ACR, YggU family COG1872 INR48_RS17910 PF01725 Ham1 family INR48_RS17915 PF06969 HemN C-terminal domain INR48_RS17915 PF04055 Radical SAM superfamily INR48_RS17920 PF06717 Protein of unknown function (DUF1202) INR48_RS17925 PF00710 Asparaginase, N-terminal INR48_RS17925 PF17763 Glutaminase/Asparaginase C-terminal domain INR48_RS17930 PF11101 Protein of unknown function (DUF2884) INR48_RS17935 PF04320 Protein with unknown function (DUF469) INR48_RS17940 PF02390 Putative methyltransferase INR48_RS17945 PF14815 NUDIX domain INR48_RS17945 PF00730 HhH-GPD superfamily base excision DNA repair protein INR48_RS17945 PF00633 Helix-hairpin-helix motif INR48_RS17945 PF10576 Iron-sulfur binding domain of endonuclease III INR48_RS17950 PF04362 Bacterial Fe(2+) trafficking INR48_RS17955 PF01464 Transglycosylase SLT domain INR48_RS17955 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain INR48_RS17960 PF03825 Nucleoside H+ symporter INR48_RS17965 PF01276 Orn/Lys/Arg decarboxylase, major domain INR48_RS17965 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain INR48_RS17965 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain INR48_RS17970 PF04474 Protein of unknown function (DUF554) INR48_RS18000 PF13007 Transposase C of IS166 homeodomain INR48_RS18000 PF03050 Transposase IS66 family INR48_RS18000 PF13817 IS66 C-terminal element INR48_RS18000 PF13005 zinc-finger binding domain of transposase IS66 INR48_RS18005 PF05717 IS66 Orf2 like protein INR48_RS18060 PF13018 Extended Signal Peptide of Type V secretion system INR48_RS18060 PF03797 Autotransporter beta-domain INR48_RS18060 PF16168 Adhesin of bacterial autotransporter system, probable stalk INR48_RS18065 PF06006 Bacterial protein of unknown function (DUF905) INR48_RS18070 PF06067 Domain of unknown function (DUF932) INR48_RS18075 PF03230 Antirestriction protein INR48_RS18080 PF04002 RadC-like JAB domain INR48_RS18085 PF06174 Protein of unknown function (DUF987) INR48_RS18090 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A INR48_RS18095 PF06755 CbtA_toxin of type IV toxin-antitoxin system INR48_RS18115 PF00563 EAL domain INR48_RS18115 PF00196 Bacterial regulatory proteins, luxR family INR48_RS18125 PF01380 SIS domain INR48_RS18125 PF00571 CBS domain INR48_RS18135 PF10531 SLBB domain INR48_RS18135 PF02563 Polysaccharide biosynthesis/export protein INR48_RS18140 PF02348 Cytidylyltransferase INR48_RS18145 PF05159 Capsule polysaccharide biosynthesis protein INR48_RS18150 PF05159 Capsule polysaccharide biosynthesis protein INR48_RS18165 PF02350 UDP-N-acetylglucosamine 2-epimerase INR48_RS18175 PF03102 NeuB family INR48_RS18175 PF08666 SAF domain INR48_RS18185 PF00005 ABC transporter INR48_RS18190 PF01061 ABC-2 type transporter INR48_RS18195 PF04612 Type II secretion system (T2SS), protein M INR48_RS18200 PF12693 GspL periplasmic domain INR48_RS18205 PF03934 Type II secretion system (T2SS), protein K INR48_RS18210 PF07963 Prokaryotic N-terminal methylation motif INR48_RS18210 PF11612 Type II secretion system (T2SS), protein J INR48_RS18215 PF07963 Prokaryotic N-terminal methylation motif INR48_RS18215 PF02501 Type II secretion system (T2SS), protein I INR48_RS18220 PF12019 Type II transport protein GspH INR48_RS18225 PF07963 Prokaryotic N-terminal methylation motif INR48_RS18225 PF08334 Type II secretion system (T2SS), protein G INR48_RS18230 PF00482 Type II secretion system (T2SS), protein F INR48_RS18235 PF00437 Type II/IV secretion system protein INR48_RS18240 PF00263 Bacterial type II and III secretion system protein INR48_RS18240 PF03958 Bacterial type II/III secretion system short domain INR48_RS18245 PF11356 Type II secretion system protein C INR48_RS18250 PF16549 Type II secretion system (T2SS) pilotin, S protein INR48_RS18255 PF01478 Type IV leader peptidase family INR48_RS18255 PF06750 Bacterial Peptidase A24 N-terminal domain INR48_RS18260 PF17291 N-terminal domain of M60-like peptidases INR48_RS18260 PF13402 Peptidase M60, enhancin and enhancin-like INR48_RS18260 PF13322 Domain of unknown function (DUF4092) INR48_RS18265 PF02652 L-lactate permease INR48_RS18270 PF01274 Malate synthase INR48_RS18275 PF03928 Haem-degrading INR48_RS18280 PF13183 4Fe-4S dicluster domain INR48_RS18280 PF02754 Cysteine-rich domain INR48_RS18285 PF01565 FAD binding domain INR48_RS18290 PF01565 FAD binding domain INR48_RS18290 PF02913 FAD linked oxidases, C-terminal domain INR48_RS18295 PF00392 Bacterial regulatory proteins, gntR family INR48_RS18295 PF07729 FCD domain INR48_RS18305 PF14535 AMP-binding enzyme C-terminal domain INR48_RS18305 PF00501 AMP-binding enzyme INR48_RS18315 PF00550 Phosphopantetheine attachment site INR48_RS18320 PF00155 Aminotransferase class I and II INR48_RS18330 PF03739 Lipopolysaccharide export system permease LptF/LptG INR48_RS18335 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) INR48_RS18345 PF01943 Polysaccharide biosynthesis protein INR48_RS18365 PF01384 Phosphate transporter family INR48_RS18370 PF05257 CHAP domain INR48_RS18370 PF03738 Glutathionylspermidine synthase preATP-grasp INR48_RS18375 PF02798 Glutathione S-transferase, N-terminal domain INR48_RS18380 PF01455 HupF/HypC family INR48_RS18385 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA INR48_RS18390 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE INR48_RS18395 PF01750 Hydrogenase maturation protease INR48_RS18400 PF00374 Nickel-dependent hydrogenase INR48_RS18405 PF03916 Polysulphide reductase, NrfD INR48_RS18410 PF13247 4Fe-4S dicluster domain INR48_RS18415 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal INR48_RS18415 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit INR48_RS18420 PF11115 Protein of unknown function (DUF2623) INR48_RS18425 PF01738 Dienelactone hydrolase family INR48_RS18430 PF00248 Aldo/keto reductase family INR48_RS18435 PF03350 Uncharacterized protein family, UPF0114 INR48_RS18445 PF02472 Biopolymer transport protein ExbD/TolR INR48_RS18450 PF01618 MotA/TolQ/ExbB proton channel family INR48_RS18455 PF01053 Cys/Met metabolism PLP-dependent enzyme INR48_RS18460 PF09335 SNARE associated Golgi protein INR48_RS18465 PF12833 Helix-turn-helix domain INR48_RS18465 PF06719 AraC-type transcriptional regulator N-terminus INR48_RS18470 PF00465 Iron-containing alcohol dehydrogenase INR48_RS18475 PF00248 Aldo/keto reductase family INR48_RS18480 PF12883 Protein of unknown function (DUF3828) INR48_RS18485 PF04728 Lipoprotein leucine-zipper INR48_RS18490 PF08497 Radical SAM N-terminal INR48_RS18490 PF11842 Domain of unknown function (DUF3362) INR48_RS18490 PF04055 Radical SAM superfamily INR48_RS18495 PF07731 Multicopper oxidase INR48_RS18495 PF07732 Multicopper oxidase INR48_RS18495 PF00394 Multicopper oxidase INR48_RS18500 PF01553 Acyltransferase INR48_RS18505 PF00521 DNA gyrase/topoisomerase IV, subunit A INR48_RS18505 PF03989 DNA gyrase C-terminal domain, beta-propeller INR48_RS18510 PF06445 GyrI-like small molecule binding domain INR48_RS18515 PF04076 Bacterial OB fold (BOF) protein INR48_RS18520 PF00486 Transcriptional regulatory protein, C terminal INR48_RS18520 PF00072 Response regulator receiver domain INR48_RS18525 PF00512 His Kinase A (phospho-acceptor) domain INR48_RS18525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS18525 PF08521 Two-component sensor kinase N-terminal INR48_RS18530 PF02525 Flavodoxin-like fold INR48_RS18535 PF03992 Antibiotic biosynthesis monooxygenase INR48_RS18540 PF01418 Helix-turn-helix domain, rpiR family INR48_RS18540 PF01380 SIS domain INR48_RS18550 PF01032 FecCD transport family INR48_RS18555 PF01032 FecCD transport family INR48_RS18560 PF00005 ABC transporter INR48_RS18565 PF07715 TonB-dependent Receptor Plug Domain INR48_RS18570 PF01751 Toprim domain INR48_RS18570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS18570 PF00986 DNA gyrase B subunit, carboxyl terminus INR48_RS18570 PF00204 DNA gyrase B INR48_RS18575 PF05728 Uncharacterised protein family (UPF0227) INR48_RS18580 PF00149 Calcineurin-like phosphoesterase INR48_RS18585 PF06853 Protein of unknown function (DUF1249) INR48_RS18590 PF00293 NUDIX domain INR48_RS18595 PF02321 Outer membrane efflux protein INR48_RS18600 PF06693 Protein of unknown function (DUF1190) INR48_RS18605 PF03738 Glutathionylspermidine synthase preATP-grasp INR48_RS18610 PF05935 Arylsulfotransferase (ASST) INR48_RS18610 PF17425 Arylsulfotransferase Ig-like domain INR48_RS18615 PF01323 DSBA-like thioredoxin domain INR48_RS18620 PF02600 Disulfide bond formation protein DsbB INR48_RS18625 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase INR48_RS18630 PF02535 ZIP Zinc transporter INR48_RS18640 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase INR48_RS18645 PF04380 Membrane fusogenic activity INR48_RS18650 PF08971 Glycogen synthesis protein INR48_RS18655 PF07290 Protein of unknown function (DUF1449) INR48_RS18660 PF01145 SPFH domain / Band 7 family INR48_RS18660 PF15975 Flotillin INR48_RS18675 PF01467 Cytidylyltransferase-like INR48_RS18675 PF00294 pfkB family carbohydrate kinase INR48_RS18680 PF08335 GlnD PII-uridylyltransferase INR48_RS18680 PF03710 Glutamate-ammonia ligase adenylyltransferase INR48_RS18685 PF01928 CYTH domain INR48_RS18690 PF08239 Bacterial SH3 domain INR48_RS18695 PF12627 Probable RNA and SrmB- binding site of polymerase A INR48_RS18695 PF01743 Poly A polymerase head domain INR48_RS18695 PF01966 HD domain INR48_RS18700 PF02673 Bacitracin resistance protein BacA INR48_RS18705 PF02152 Dihydroneopterin aldolase INR48_RS18710 PF02660 Glycerol-3-phosphate acyltransferase INR48_RS18715 PF03466 LysR substrate binding domain INR48_RS18715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS18720 PF05681 Fumarate hydratase (Fumerase) INR48_RS18725 PF05683 Fumarase C-terminus INR48_RS18730 PF00939 Sodium:sulfate symporter transmembrane region INR48_RS18735 PF00814 Glycoprotease family INR48_RS18740 PF01165 Ribosomal protein S21 INR48_RS18745 PF08275 DNA primase catalytic core, N-terminal domain INR48_RS18745 PF01807 CHC2 zinc finger INR48_RS18745 PF08278 DNA primase DnaG DnaB-binding INR48_RS18745 PF10410 DnaB-helicase binding domain of primase INR48_RS18750 PF04546 Sigma-70, non-essential region INR48_RS18750 PF03979 Sigma-70 factor, region 1.1 INR48_RS18750 PF04542 Sigma-70 region 2 INR48_RS18750 PF00140 Sigma-70 factor, region 1.2 INR48_RS18750 PF04545 Sigma-70, region 4 INR48_RS18750 PF04539 Sigma-70 region 3 INR48_RS18755 PF03167 Uracil DNA glycosylase superfamily INR48_RS18765 PF04954 Siderophore-interacting protein INR48_RS18765 PF08021 Siderophore-interacting FAD-binding domain INR48_RS18770 PF03551 Transcriptional regulator PadR-like family INR48_RS18775 PF08447 PAS fold INR48_RS18775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INR48_RS18780 PF00202 Aminotransferase class-III INR48_RS18785 PF01588 Putative tRNA binding domain INR48_RS18790 PF00356 Bacterial regulatory proteins, lacI family INR48_RS18795 PF00703 Glycosyl hydrolases family 2 INR48_RS18795 PF02836 Glycosyl hydrolases family 2, TIM barrel domain INR48_RS18795 PF16353 Domain of unknown function(DUF4981) INR48_RS18795 PF02929 Beta galactosidase small chain INR48_RS18795 PF02837 Glycosyl hydrolases family 2, sugar binding domain INR48_RS18800 PF04074 YhcH/YjgK/YiaL INR48_RS18805 PF13520 Amino acid permease INR48_RS18815 PF01204 Trehalase INR48_RS18820 PF07992 Pyridine nucleotide-disulphide oxidoreductase INR48_RS18820 PF00724 NADH:flavin oxidoreductase / NADH oxidase family INR48_RS18825 PF01381 Helix-turn-helix INR48_RS18830 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system INR48_RS18835 PF05175 Methyltransferase small domain INR48_RS18840 PF01863 Protein of unknown function DUF45 INR48_RS18845 PF02698 DUF218 domain INR48_RS18850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold INR48_RS18855 PF03741 Integral membrane protein TerC family INR48_RS18860 PF00375 Sodium:dicarboxylate symporter family INR48_RS18865 PF10688 Bacterial inner membrane protein INR48_RS18870 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus INR48_RS18870 PF08666 SAF domain INR48_RS18875 PF02614 Glucuronate isomerase INR48_RS18880 PF07690 Major Facilitator Superfamily INR48_RS18885 PF07729 FCD domain INR48_RS18885 PF00392 Bacterial regulatory proteins, gntR family INR48_RS18890 PF09335 SNARE associated Golgi protein INR48_RS18895 PF13721 SecD export protein N-terminal TM region INR48_RS18900 PF06476 Protein of unknown function (DUF1090) INR48_RS18905 PF05957 Bacterial protein of unknown function (DUF883) INR48_RS18910 PF07332 Putative Actinobacterial Holin-X, holin superfamily III INR48_RS18915 PF13997 YqjK-like protein INR48_RS18920 PF07681 DoxX INR48_RS18925 PF13409 Glutathione S-transferase, N-terminal domain INR48_RS18930 PF05656 Protein of unknown function (DUF805) INR48_RS18935 PF05656 Protein of unknown function (DUF805) INR48_RS18940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS18940 PF03466 LysR substrate binding domain INR48_RS18945 PF02678 Pirin INR48_RS18945 PF17954 Quercetinase C-terminal cupin domain INR48_RS18955 PF03313 Serine dehydratase alpha chain INR48_RS18965 PF03313 Serine dehydratase alpha chain INR48_RS18965 PF03315 Serine dehydratase beta chain INR48_RS18970 PF01042 Endoribonuclease L-PSP INR48_RS18975 PF01228 Glycine radical INR48_RS18975 PF02901 Pyruvate formate lyase-like INR48_RS18980 PF00871 Acetokinase family INR48_RS18985 PF03222 Tryptophan/tyrosine permease family INR48_RS18990 PF00291 Pyridoxal-phosphate dependent enzyme INR48_RS18995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS18995 PF03466 LysR substrate binding domain INR48_RS19020 PF02595 Glycerate kinase family INR48_RS19025 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase INR48_RS19025 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase INR48_RS19030 PF03328 HpcH/HpaI aldolase/citrate lyase family INR48_RS19035 PF07690 Major Facilitator Superfamily INR48_RS19040 PF08666 SAF domain INR48_RS19040 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus INR48_RS19045 PF15937 prlF antitoxin for toxin YhaV_toxin INR48_RS19050 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system INR48_RS19055 PF08220 DeoR-like helix-turn-helix domain INR48_RS19055 PF00455 DeoR C terminal sensor domain INR48_RS19060 PF08013 Tagatose 6 phosphate kinase INR48_RS19065 PF03830 PTS system sorbose subfamily IIB component INR48_RS19070 PF03609 PTS system sorbose-specific iic component INR48_RS19075 PF03613 PTS system mannose/fructose/sorbose family IID component INR48_RS19080 PF03610 PTS system fructose IIA component INR48_RS19085 PF01979 Amidohydrolase family INR48_RS19090 PF01380 SIS domain INR48_RS19095 PF01116 Fructose-bisphosphate aldolase class-II INR48_RS19100 PF03830 PTS system sorbose subfamily IIB component INR48_RS19105 PF03609 PTS system sorbose-specific iic component INR48_RS19110 PF03613 PTS system mannose/fructose/sorbose family IID component INR48_RS19115 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase INR48_RS19120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases INR48_RS19125 PF04348 LppC putative lipoprotein INR48_RS19130 PF02021 Uncharacterised protein family UPF0102 INR48_RS19135 PF13580 SIS domain INR48_RS19140 PF04972 BON domain INR48_RS19145 PF03773 Predicted permease INR48_RS19150 PF13460 NAD(P)H-binding INR48_RS19155 PF01965 DJ-1/PfpI family INR48_RS19165 PF01541 GIY-YIG catalytic domain INR48_RS19170 PF13508 Acetyltransferase (GNAT) domain INR48_RS19175 PF02036 SCP-2 sterol transfer family INR48_RS19180 PF01136 Peptidase family U32 INR48_RS19185 PF01136 Peptidase family U32 INR48_RS19190 PF00296 Luciferase-like monooxygenase INR48_RS19195 PF03734 L,D-transpeptidase catalytic domain INR48_RS19205 PF03222 Tryptophan/tyrosine permease family INR48_RS19210 PF00270 DEAD/DEAH box helicase INR48_RS19210 PF12343 Cold shock protein DEAD box A INR48_RS19210 PF00271 Helicase conserved C-terminal domain INR48_RS19210 PF03880 DbpA RNA binding domain INR48_RS19220 PF07719 Tetratricopeptide repeat INR48_RS19220 PF13181 Tetratricopeptide repeat INR48_RS19225 PF00013 KH domain INR48_RS19225 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain INR48_RS19225 PF01138 3' exoribonuclease family, domain 1 INR48_RS19225 PF00575 S1 RNA binding domain INR48_RS19225 PF03725 3' exoribonuclease family, domain 2 INR48_RS19230 PF00312 Ribosomal protein S15 INR48_RS19235 PF01509 TruB family pseudouridylate synthase (N terminal domain) INR48_RS19235 PF16198 tRNA pseudouridylate synthase B C-terminal domain INR48_RS19235 PF09157 Pseudouridine synthase II TruB, C-terminal INR48_RS19240 PF02033 Ribosome-binding factor A INR48_RS19245 PF00009 Elongation factor Tu GTP binding domain INR48_RS19245 PF11987 Translation-initiation factor 2 INR48_RS19245 PF08364 Bacterial translation initiation factor IF-2 associated region INR48_RS19245 PF04760 Translation initiation factor IF-2, N-terminal region INR48_RS19250 PF00575 S1 RNA binding domain INR48_RS19250 PF08529 NusA N-terminal domain INR48_RS19250 PF13184 NusA-like KH domain INR48_RS19255 PF02576 RimP N-terminal domain INR48_RS19255 PF17384 RimP C-terminal SH3 domain INR48_RS19265 PF00764 Arginosuccinate synthase INR48_RS19270 PF00884 Sulfatase INR48_RS19280 PF03840 Preprotein translocase SecG subunit INR48_RS19285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain INR48_RS19285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III INR48_RS19285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II INR48_RS19285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I INR48_RS19290 PF00809 Pterin binding enzyme INR48_RS19295 PF00004 ATPase family associated with various cellular activities (AAA) INR48_RS19295 PF17862 AAA+ lid domain INR48_RS19295 PF06480 FtsH Extracellular INR48_RS19295 PF01434 Peptidase family M41 INR48_RS19300 PF01728 FtsJ-like methyltransferase INR48_RS19305 PF01985 CRS1 / YhbY (CRM) domain INR48_RS19310 PF03449 Transcription elongation factor, N-terminal INR48_RS19310 PF01272 Transcription elongation factor, GreA/GreB, C-term INR48_RS19315 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family INR48_RS19320 PF01018 GTP1/OBG INR48_RS19320 PF01926 50S ribosome-binding GTPase INR48_RS19325 PF00892 EamA-like transporter family INR48_RS19330 PF01016 Ribosomal L27 protein INR48_RS19335 PF00829 Ribosomal prokaryotic L21 protein INR48_RS19340 PF00348 Polyprenyl synthetase INR48_RS19345 PF13693 Winged helix-turn-helix DNA-binding INR48_RS19350 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) INR48_RS19355 PF01722 BolA-like protein INR48_RS19360 PF13466 STAS domain INR48_RS19365 PF05494 MlaC protein INR48_RS19370 PF02470 MlaD protein INR48_RS19375 PF02405 Permease MlaE INR48_RS19380 PF00005 ABC transporter INR48_RS19385 PF01699 Sodium/calcium exchanger protein INR48_RS19390 PF01380 SIS domain INR48_RS19390 PF00571 CBS domain INR48_RS19400 PF06835 Lipopolysaccharide-assembly, LptC-related INR48_RS19405 PF03968 OstA-like protein INR48_RS19410 PF00005 ABC transporter INR48_RS19410 PF12399 Branched-chain amino acid ATP-binding cassette transporter INR48_RS19415 PF00309 Sigma-54 factor, Activator interacting domain (AID) INR48_RS19415 PF04963 Sigma-54 factor, core binding domain INR48_RS19415 PF04552 Sigma-54, DNA binding domain INR48_RS19420 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein INR48_RS19425 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INR48_RS19430 PF03668 P-loop ATPase protein family INR48_RS19435 PF00381 PTS HPr component phosphorylation site INR48_RS19440 PF10707 PhoP regulatory network protein YrbL INR48_RS19445 PF00912 Transglycosylase INR48_RS19455 PF00072 Response regulator receiver domain INR48_RS19455 PF18415 Histidine kinase receptor ArcB trans-membrane domain INR48_RS19455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS19455 PF00989 PAS fold INR48_RS19455 PF01627 Hpt domain INR48_RS19455 PF00512 His Kinase A (phospho-acceptor) domain INR48_RS19460 PF04055 Radical SAM superfamily INR48_RS19460 PF16199 Radical_SAM C-terminal domain INR48_RS19465 PF00310 Glutamine amidotransferases class-II INR48_RS19465 PF01645 Conserved region in glutamate synthase INR48_RS19465 PF01493 GXGXG motif INR48_RS19465 PF04898 Glutamate synthase central domain INR48_RS19470 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster INR48_RS19470 PF07992 Pyridine nucleotide-disulphide oxidoreductase INR48_RS19480 PF04074 YhcH/YjgK/YiaL INR48_RS19485 PF00480 ROK family INR48_RS19490 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase INR48_RS19495 PF07690 Major Facilitator Superfamily INR48_RS19500 PF00701 Dihydrodipicolinate synthetase family INR48_RS19505 PF00392 Bacterial regulatory proteins, gntR family INR48_RS19505 PF07729 FCD domain INR48_RS19510 PF03606 C4-dicarboxylate anaerobic carrier INR48_RS19515 PF04386 Stringent starvation protein B INR48_RS19520 PF00043 Glutathione S-transferase, C-terminal domain INR48_RS19520 PF02798 Glutathione S-transferase, N-terminal domain INR48_RS19525 PF00380 Ribosomal protein S9/S16 INR48_RS19530 PF00572 Ribosomal protein L13 INR48_RS19535 PF03969 AFG1-like ATPase INR48_RS19540 PF06295 Protein of unknown function (DUF1043) INR48_RS19545 PF00595 PDZ domain INR48_RS19545 PF13180 PDZ domain INR48_RS19550 PF13180 PDZ domain INR48_RS19555 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain INR48_RS19555 PF00056 lactate/malate dehydrogenase, NAD binding domain INR48_RS19560 PF01316 Arginine repressor, DNA binding domain INR48_RS19560 PF02863 Arginine repressor, C-terminal domain INR48_RS19565 PF07338 Protein of unknown function (DUF1471) INR48_RS19570 PF01337 Barstar (barnase inhibitor) INR48_RS19575 PF04632 Fusaric acid resistance protein family INR48_RS19580 PF13533 Biotin-lipoyl like INR48_RS19585 PF07869 Protein of unknown function (DUF1656) INR48_RS19590 PF03466 LysR substrate binding domain INR48_RS19590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS19595 PF01523 Putative modulator of DNA gyrase INR48_RS19600 PF13502 AsmA-like C-terminal region INR48_RS19600 PF13116 Protein of unknown function INR48_RS19605 PF00575 S1 RNA binding domain INR48_RS19605 PF10150 Ribonuclease E/G family INR48_RS19610 PF02545 Maf-like protein INR48_RS19615 PF04093 rod shape-determining protein MreD INR48_RS19620 PF04085 rod shape-determining protein MreC INR48_RS19630 PF00563 EAL domain INR48_RS19630 PF00990 Diguanylate cyclase, GGDEF domain INR48_RS19630 PF17157 Gammaproteobacterial periplasmic sensor domain INR48_RS19635 PF00107 Zinc-binding dehydrogenase INR48_RS19635 PF08240 Alcohol dehydrogenase GroES-like domain INR48_RS19645 PF00364 Biotin-requiring enzyme INR48_RS19650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain INR48_RS19650 PF00289 Biotin carboxylase, N-terminal domain INR48_RS19650 PF02785 Biotin carboxylase C-terminal domain INR48_RS19655 PF06196 Protein of unknown function (DUF997) INR48_RS19660 PF00474 Sodium:solute symporter family INR48_RS19670 PF01207 Dihydrouridine synthase (Dus) INR48_RS19675 PF02954 Bacterial regulatory protein, Fis family INR48_RS19680 PF01555 DNA methylase INR48_RS19685 PF10831 Protein of unknown function (DUF2556) INR48_RS19690 PF08361 MAATS-type transcriptional repressor, C-terminal region INR48_RS19690 PF00440 Bacterial regulatory proteins, tetR family INR48_RS19695 PF00529 HlyD membrane-fusion protein of T1SS INR48_RS19695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INR48_RS19700 PF00873 AcrB/AcrD/AcrF family INR48_RS19710 PF00497 Bacterial extracellular solute-binding proteins, family 3 INR48_RS19715 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS19720 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS19725 PF00005 ABC transporter INR48_RS19765 PF00132 Bacterial transferase hexapeptide (six repeats) INR48_RS19770 PF07369 Protein of unknown function (DUF1488) INR48_RS19775 PF18317 Shikimate 5'-dehydrogenase C-terminal domain INR48_RS19775 PF01488 Shikimate / quinate 5-dehydrogenase INR48_RS19775 PF08501 Shikimate dehydrogenase substrate binding domain INR48_RS19780 PF01300 Telomere recombination INR48_RS19785 PF01396 Topoisomerase DNA binding C4 zinc finger INR48_RS19790 PF04361 Protein of unknown function (DUF494) INR48_RS19795 PF17782 DprA winged helix domain INR48_RS19795 PF02481 DNA recombination-mediator protein A INR48_RS19800 PF01327 Polypeptide deformylase INR48_RS19805 PF00551 Formyl transferase INR48_RS19805 PF02911 Formyl transferase, C-terminal domain INR48_RS19810 PF01029 NusB family INR48_RS19810 PF01189 16S rRNA methyltransferase RsmB/F INR48_RS19815 PF02080 TrkA-C domain INR48_RS19815 PF02254 TrkA-N domain INR48_RS19820 PF01741 Large-conductance mechanosensitive channel, MscL INR48_RS19825 PF03889 Alternative ribosome-rescue factor A INR48_RS19830 PF13411 MerR HTH family regulatory protein INR48_RS19835 PF09350 Domain of unknown function (DUF1992) INR48_RS19840 PF01196 Ribosomal protein L17 INR48_RS19845 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain INR48_RS19845 PF01000 RNA polymerase Rpb3/RpoA insert domain INR48_RS19845 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain INR48_RS19850 PF00163 Ribosomal protein S4/S9 N-terminal domain INR48_RS19850 PF01479 S4 domain INR48_RS19855 PF00411 Ribosomal protein S11 INR48_RS19860 PF00416 Ribosomal protein S13/S18 INR48_RS19865 PF00444 Ribosomal protein L36 INR48_RS19870 PF00344 SecY translocase INR48_RS19875 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A INR48_RS19880 PF00327 Ribosomal protein L30p/L7e INR48_RS19885 PF03719 Ribosomal protein S5, C-terminal domain INR48_RS19885 PF00333 Ribosomal protein S5, N-terminal domain INR48_RS19890 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast INR48_RS19895 PF00347 Ribosomal protein L6 INR48_RS19900 PF00410 Ribosomal protein S8 INR48_RS19905 PF00253 Ribosomal protein S14p/S29e INR48_RS19910 PF00673 ribosomal L5P family C-terminus INR48_RS19910 PF00281 Ribosomal protein L5 INR48_RS19915 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 INR48_RS19915 PF00467 KOW motif INR48_RS19920 PF00238 Ribosomal protein L14p/L23e INR48_RS19925 PF00366 Ribosomal protein S17 INR48_RS19930 PF00831 Ribosomal L29 protein INR48_RS19935 PF00252 Ribosomal protein L16p/L10e INR48_RS19940 PF00189 Ribosomal protein S3, C-terminal domain INR48_RS19940 PF07650 KH domain INR48_RS19945 PF00237 Ribosomal protein L22p/L17e INR48_RS19950 PF00203 Ribosomal protein S19 INR48_RS19955 PF03947 Ribosomal Proteins L2, C-terminal domain INR48_RS19955 PF00181 Ribosomal Proteins L2, RNA binding domain INR48_RS19960 PF00276 Ribosomal protein L23 INR48_RS19965 PF00573 Ribosomal protein L4/L1 family INR48_RS19970 PF00297 Ribosomal protein L3 INR48_RS19975 PF00338 Ribosomal protein S10p/S20e INR48_RS19980 PF01478 Type IV leader peptidase family INR48_RS19985 PF00210 Ferritin-like domain INR48_RS19990 PF04324 BFD-like [2Fe-2S] binding domain INR48_RS19995 PF03143 Elongation factor Tu C-terminal domain INR48_RS19995 PF00009 Elongation factor Tu GTP binding domain INR48_RS19995 PF03144 Elongation factor Tu domain 2 INR48_RS20000 PF00679 Elongation factor G C-terminus INR48_RS20000 PF14492 Elongation Factor G, domain II INR48_RS20000 PF03764 Elongation factor G, domain IV INR48_RS20000 PF00009 Elongation factor Tu GTP binding domain INR48_RS20000 PF03144 Elongation factor Tu domain 2 INR48_RS20005 PF00177 Ribosomal protein S7p/S5e INR48_RS20010 PF00164 Ribosomal protein S12/S23 INR48_RS20015 PF04077 DsrH like protein INR48_RS20020 PF02635 DsrE/DsrF-like family INR48_RS20025 PF02635 DsrE/DsrF-like family INR48_RS20030 PF08348 YheO-like PAS domain INR48_RS20030 PF13309 HTH domain INR48_RS20035 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase INR48_RS20035 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase INR48_RS20040 PF04102 SlyX INR48_RS20045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase INR48_RS20050 PF09526 Probable metal-binding protein (DUF2387) INR48_RS20055 PF02254 TrkA-N domain INR48_RS20055 PF00999 Sodium/hydrogen exchanger family INR48_RS20060 PF02525 Flavodoxin-like fold INR48_RS20065 PF00005 ABC transporter INR48_RS20065 PF12848 ABC transporter INR48_RS20070 PF00561 alpha/beta hydrolase fold INR48_RS20075 PF06794 Uncharacterised protein family (UPF0270) INR48_RS20080 PF00485 Phosphoribulokinase / Uridine kinase family INR48_RS20085 PF02566 OsmC-like protein INR48_RS20090 PF13545 Crp-like helix-turn-helix domain INR48_RS20090 PF00027 Cyclic nucleotide-binding domain INR48_RS20095 PF12805 FUSC-like inner membrane protein yccS INR48_RS20100 PF00202 Aminotransferase class-III INR48_RS20105 PF00117 Glutamine amidotransferase class-I INR48_RS20110 PF02661 Fic/DOC family INR48_RS20115 PF10832 Protein of unknown function (DUF2559) INR48_RS20120 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD INR48_RS20125 PF07690 Major Facilitator Superfamily INR48_RS20130 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain INR48_RS20130 PF07992 Pyridine nucleotide-disulphide oxidoreductase INR48_RS20130 PF18267 Rubredoxin NAD+ reductase C-terminal domain INR48_RS20130 PF04324 BFD-like [2Fe-2S] binding domain INR48_RS20130 PF01077 Nitrite and sulphite reductase 4Fe-4S domain INR48_RS20135 PF13806 Rieske-like [2Fe-2S] domain INR48_RS20140 PF01226 Formate/nitrite transporter INR48_RS20145 PF10414 Sirohaem synthase dimerisation region INR48_RS20145 PF14824 Sirohaem biosynthesis protein central INR48_RS20145 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases INR48_RS20150 PF13978 Protein of unknown function (DUF4223) INR48_RS20155 PF00155 Aminotransferase class I and II INR48_RS20160 PF10797 Protein of unknown function INR48_RS20165 PF10941 Protein of unknown function DUF2620 INR48_RS20170 PF02126 Phosphotriesterase family INR48_RS20175 PF01676 Metalloenzyme superfamily INR48_RS20180 PF01168 Alanine racemase, N-terminal domain INR48_RS20190 PF14503 YhfZ C-terminal domain INR48_RS20190 PF14502 Helix-turn-helix domain INR48_RS20195 PF00579 tRNA synthetases class I (W and Y) INR48_RS20200 PF13419 Haloacid dehalogenase-like hydrolase INR48_RS20205 PF00834 Ribulose-phosphate 3 epimerase family INR48_RS20210 PF02086 D12 class N6 adenine-specific DNA methyltransferase INR48_RS20215 PF05036 Sporulation related domain INR48_RS20220 PF01761 3-dehydroquinate synthase INR48_RS20225 PF01202 Shikimate kinase INR48_RS20230 PF00263 Bacterial type II and III secretion system protein INR48_RS20230 PF03958 Bacterial type II/III secretion system short domain INR48_RS20235 PF10748 DNA utilization proteins HofP INR48_RS20245 PF05137 Fimbrial assembly protein (PilN) INR48_RS20255 PF17092 Penicillin-binding protein OB-like domain INR48_RS20255 PF00912 Transglycosylase INR48_RS20255 PF00905 Penicillin binding protein transpeptidase domain INR48_RS20260 PF00293 NUDIX domain INR48_RS20265 PF07095 Intracellular growth attenuator protein IgaA INR48_RS20270 PF13419 Haloacid dehalogenase-like hydrolase INR48_RS20275 PF01479 S4 domain INR48_RS20280 PF01430 Hsp33 protein INR48_RS20285 PF13687 Domain of unknown function (DUF4153) INR48_RS20290 PF01293 Phosphoenolpyruvate carboxykinase INR48_RS20295 PF00672 HAMP domain INR48_RS20295 PF00512 His Kinase A (phospho-acceptor) domain INR48_RS20295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS20300 PF00486 Transcriptional regulatory protein, C terminal INR48_RS20300 PF00072 Response regulator receiver domain INR48_RS20305 PF01272 Transcription elongation factor, GreA/GreB, C-term INR48_RS20305 PF03449 Transcription elongation factor, N-terminal INR48_RS20310 PF09371 Tex-like protein N-terminal domain INR48_RS20310 PF00575 S1 RNA binding domain INR48_RS20310 PF16921 Tex protein YqgF-like domain INR48_RS20310 PF17674 HHH domain INR48_RS20315 PF04023 FeoA domain INR48_RS20320 PF07670 Nucleoside recognition INR48_RS20320 PF07664 Ferrous iron transport protein B C terminus INR48_RS20320 PF17910 FeoB cytosolic helical domain INR48_RS20320 PF02421 Ferrous iron transport protein B INR48_RS20325 PF09012 FeoC like transcriptional regulator INR48_RS20330 PF04754 Putative transposase, YhgA-like INR48_RS20335 PF00561 alpha/beta hydrolase fold INR48_RS20340 PF00156 Phosphoribosyl transferase domain INR48_RS20345 PF01106 NifU-like domain INR48_RS20345 PF01521 Iron-sulphur cluster biosynthesis INR48_RS20350 PF02447 GntP family permease INR48_RS20355 PF02446 4-alpha-glucanotransferase INR48_RS20360 PF00343 Carbohydrate phosphorylase INR48_RS20365 PF17874 MalT-like TPR region INR48_RS20365 PF00196 Bacterial regulatory proteins, luxR family INR48_RS20370 PF01137 RNA 3'-terminal phosphate cyclase INR48_RS20370 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain INR48_RS20380 PF06956 Regulator of RNA terminal phosphate cyclase INR48_RS20380 PF00158 Sigma-54 interaction domain INR48_RS20385 PF08220 DeoR-like helix-turn-helix domain INR48_RS20385 PF00455 DeoR C terminal sensor domain INR48_RS20390 PF01694 Rhomboid family INR48_RS20390 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease INR48_RS20395 PF00581 Rhodanese-like domain INR48_RS20400 PF01266 FAD dependent oxidoreductase INR48_RS20400 PF16901 C-terminal domain of alpha-glycerophosphate oxidase INR48_RS20410 PF02753 Pili assembly chaperone PapD, C-terminal domain INR48_RS20410 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain INR48_RS20420 PF00419 Fimbrial protein INR48_RS20425 PF13954 PapC N-terminal domain INR48_RS20425 PF00577 Outer membrane usher protein INR48_RS20425 PF13953 PapC C-terminal domain INR48_RS20430 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain INR48_RS20430 PF02753 Pili assembly chaperone PapD, C-terminal domain INR48_RS20440 PF00343 Carbohydrate phosphorylase INR48_RS20445 PF08323 Starch synthase catalytic domain INR48_RS20445 PF00534 Glycosyl transferases group 1 INR48_RS20450 PF00483 Nucleotidyl transferase INR48_RS20455 PF00128 Alpha amylase, catalytic domain INR48_RS20455 PF18390 Glycogen debranching enzyme C-terminal domain INR48_RS20455 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) INR48_RS20460 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) INR48_RS20460 PF00128 Alpha amylase, catalytic domain INR48_RS20460 PF02806 Alpha amylase, C-terminal all-beta domain INR48_RS20465 PF02774 Semialdehyde dehydrogenase, dimerisation domain INR48_RS20465 PF01118 Semialdehyde dehydrogenase, NAD binding domain INR48_RS20470 PF01914 MarC family integral membrane protein INR48_RS20475 PF02447 GntP family permease INR48_RS20480 PF01202 Shikimate kinase INR48_RS20485 PF00356 Bacterial regulatory proteins, lacI family INR48_RS20485 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family INR48_RS20490 PF17954 Quercetinase C-terminal cupin domain INR48_RS20490 PF02678 Pirin INR48_RS20495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold INR48_RS20495 PF02894 Oxidoreductase family, C-terminal alpha/beta domain INR48_RS20500 PF00583 Acetyltransferase (GNAT) family INR48_RS20505 PF05638 Type VI secretion system effector, Hcp INR48_RS20520 PF15567 Immunity protein 35 INR48_RS20530 PF10956 Protein of unknown function (DUF2756) INR48_RS20535 PF03009 Glycerophosphoryl diester phosphodiesterase family INR48_RS20540 PF17912 MalK OB fold domain INR48_RS20540 PF00005 ABC transporter INR48_RS20545 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS20550 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS20555 PF13416 Bacterial extracellular solute-binding protein INR48_RS20560 PF00005 ABC transporter INR48_RS20565 PF00005 ABC transporter INR48_RS20565 PF12399 Branched-chain amino acid ATP-binding cassette transporter INR48_RS20570 PF02653 Branched-chain amino acid transport system / permease component INR48_RS20570 PF11862 Domain of unknown function (DUF3382) INR48_RS20575 PF02653 Branched-chain amino acid transport system / permease component INR48_RS20580 PF13458 Periplasmic binding protein INR48_RS20585 PF12568 Acetyltransferase (GNAT) domain, PanZ INR48_RS20595 PF13458 Periplasmic binding protein INR48_RS20600 PF04542 Sigma-70 region 2 INR48_RS20600 PF04545 Sigma-70, region 4 INR48_RS20605 PF18075 FtsX extracellular domain INR48_RS20605 PF02687 FtsX-like permease family INR48_RS20610 PF00005 ABC transporter INR48_RS20615 PF00448 SRP54-type protein, GTPase domain INR48_RS20615 PF02881 SRP54-type protein, helical bundle domain INR48_RS20625 PF06611 Protein of unknown function (DUF1145) INR48_RS20630 PF10694 Protein of unknown function (DUF2500) INR48_RS20635 PF07947 YhhN family INR48_RS20640 PF00403 Heavy-metal-associated domain INR48_RS20650 PF01206 Sulfurtransferase TusA INR48_RS20655 PF02592 Putative vitamin uptake transporter INR48_RS20660 PF08786 DcrB INR48_RS20665 PF07690 Major Facilitator Superfamily INR48_RS20670 PF01594 AI-2E family transporter INR48_RS20680 PF00891 O-methyltransferase domain INR48_RS20690 PF01553 Acyltransferase INR48_RS20695 PF00550 Phosphopantetheine attachment site INR48_RS20700 PF00550 Phosphopantetheine attachment site INR48_RS20710 PF13193 AMP-binding enzyme C-terminal domain INR48_RS20710 PF00501 AMP-binding enzyme INR48_RS20710 PF00550 Phosphopantetheine attachment site INR48_RS20710 PF00975 Thioesterase domain INR48_RS20710 PF00668 Condensation domain INR48_RS20720 PF00535 Glycosyl transferase family 2 INR48_RS20745 PF02801 Beta-ketoacyl synthase, C-terminal domain INR48_RS20745 PF00109 Beta-ketoacyl synthase, N-terminal domain INR48_RS20750 PF07977 FabA-like domain INR48_RS20760 PF02801 Beta-ketoacyl synthase, C-terminal domain INR48_RS20760 PF00109 Beta-ketoacyl synthase, N-terminal domain INR48_RS20765 PF01648 4'-phosphopantetheinyl transferase superfamily INR48_RS20770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INR48_RS20775 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS20780 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS20785 PF00005 ABC transporter INR48_RS20790 PF00005 ABC transporter INR48_RS20795 PF01402 Ribbon-helix-helix protein, copG family INR48_RS20795 PF08753 NikR C terminal nickel binding domain INR48_RS20800 PF00392 Bacterial regulatory proteins, gntR family INR48_RS20800 PF07702 UTRA domain INR48_RS20810 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INR48_RS20815 PF03611 PTS system sugar-specific permease component INR48_RS20825 PF00381 PTS HPr component phosphorylation site INR48_RS20830 PF01116 Fructose-bisphosphate aldolase class-II INR48_RS20840 PF00005 ABC transporter INR48_RS20845 PF13533 Biotin-lipoyl like INR48_RS20850 PF13258 Domain of unknown function (DUF4049) INR48_RS20855 PF13258 Domain of unknown function (DUF4049) INR48_RS20860 PF10951 Protein of unknown function (DUF2776) INR48_RS20870 PF01384 Phosphate transporter family INR48_RS20875 PF10625 Universal stress protein B (UspB) INR48_RS20880 PF00582 Universal stress protein family INR48_RS20885 PF00854 POT family INR48_RS20890 PF04445 Putative SAM-dependent methyltransferase INR48_RS20895 PF01432 Peptidase family M3 INR48_RS20900 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ INR48_RS20905 PF07992 Pyridine nucleotide-disulphide oxidoreductase INR48_RS20905 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain INR48_RS20920 PF01022 Bacterial regulatory protein, arsR family INR48_RS20925 PF06953 Arsenical resistance operon trans-acting repressor ArsD INR48_RS20930 PF02374 Anion-transporting ATPase INR48_RS20935 PF02040 Arsenical pump membrane protein INR48_RS20940 PF03960 ArsC family INR48_RS20960 PF03843 Outer membrane lipoprotein Slp family INR48_RS20965 PF00196 Bacterial regulatory proteins, luxR family INR48_RS20970 PF05171 Haemin-degrading HemS.ChuX domain INR48_RS20975 PF07715 TonB-dependent Receptor Plug Domain INR48_RS20975 PF00593 TonB dependent receptor INR48_RS20980 PF01497 Periplasmic binding protein INR48_RS20985 PF04055 Radical SAM superfamily INR48_RS20990 PF06228 Haem utilisation ChuX/HutX INR48_RS21000 PF01032 FecCD transport family INR48_RS21005 PF00005 ABC transporter INR48_RS21010 PF02308 MgtC family INR48_RS21015 PF06411 HdeA/HdeB family INR48_RS21020 PF06411 HdeA/HdeB family INR48_RS21025 PF03729 Short repeat of unknown function (DUF308) INR48_RS21030 PF00196 Bacterial regulatory proteins, luxR family INR48_RS21040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INR48_RS21040 PF00529 HlyD membrane-fusion protein of T1SS INR48_RS21045 PF00873 AcrB/AcrD/AcrF family INR48_RS21050 PF12833 Helix-turn-helix domain INR48_RS21055 PF12833 Helix-turn-helix domain INR48_RS21060 PF00282 Pyridoxal-dependent decarboxylase conserved domain INR48_RS21065 PF00034 Cytochrome c INR48_RS21065 PF03150 Di-haem cytochrome c peroxidase INR48_RS21065 PF14376 Haem-binding domain INR48_RS21070 PF01204 Trehalase INR48_RS21075 PF00196 Bacterial regulatory proteins, luxR family INR48_RS21080 PF03466 LysR substrate binding domain INR48_RS21080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS21085 PF03631 Virulence factor BrkB INR48_RS21090 PF00083 Sugar (and other) transporter INR48_RS21090 PF07690 Major Facilitator Superfamily INR48_RS21095 PF05170 AsmA family INR48_RS21100 PF00563 EAL domain INR48_RS21105 PF00294 pfkB family carbohydrate kinase INR48_RS21135 PF05193 Peptidase M16 inactive domain INR48_RS21135 PF00675 Insulinase (Peptidase family M16) INR48_RS21140 PF00375 Sodium:dicarboxylate symporter family INR48_RS21145 PF00672 HAMP domain INR48_RS21145 PF00990 Diguanylate cyclase, GGDEF domain INR48_RS21145 PF17154 Gammaproteobacterial periplasmic sensor domain INR48_RS21145 PF00563 EAL domain INR48_RS21150 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) INR48_RS21155 PF01270 Glycosyl hydrolases family 8 INR48_RS21160 PF03170 Bacterial cellulose synthase subunit INR48_RS21165 PF07238 PilZ domain INR48_RS21165 PF00535 Glycosyl transferase family 2 INR48_RS21165 PF03552 Cellulose synthase INR48_RS21170 PF06564 Cellulose biosynthesis protein BcsQ INR48_RS21175 PF10945 Cellulose biosynthesis protein BcsR INR48_RS21180 PF10995 Cellulose biosynthesis GIL INR48_RS21185 PF11120 Cellulose biosynthesis protein BcsF INR48_RS21190 PF11658 Cellulose biosynthesis protein BcsG INR48_RS21195 PF13940 Toxin Ldr, type I toxin-antitoxin system INR48_RS21200 PF13940 Toxin Ldr, type I toxin-antitoxin system INR48_RS21205 PF03222 Tryptophan/tyrosine permease family INR48_RS21210 PF00005 ABC transporter INR48_RS21210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INR48_RS21215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INR48_RS21215 PF00005 ABC transporter INR48_RS21220 PF12911 N-terminal TM domain of oligopeptide transport permease C INR48_RS21220 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS21225 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS21230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INR48_RS21245 PF00884 Sulfatase INR48_RS21245 PF08019 Phosphoethanolamine transferase EptA/EptB INR48_RS21250 PF07690 Major Facilitator Superfamily INR48_RS21255 PF03797 Autotransporter beta-domain INR48_RS21260 PF03352 Methyladenine glycosylase INR48_RS21265 PF00583 Acetyltransferase (GNAT) family INR48_RS21270 PF01568 Molydopterin dinucleotide binding domain INR48_RS21270 PF18364 Molybdopterin oxidoreductase N-terminal domain INR48_RS21270 PF00384 Molybdopterin oxidoreductase INR48_RS21275 PF13488 Glycine zipper INR48_RS21275 PF00691 OmpA family INR48_RS21280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INR48_RS21280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain INR48_RS21285 PF11254 Protein of unknown function (DUF3053) INR48_RS21290 PF01381 Helix-turn-helix INR48_RS21295 PF00313 'Cold-shock' DNA-binding domain INR48_RS21300 PF01848 Hok/gef family INR48_RS21305 PF02092 Glycyl-tRNA synthetase beta subunit INR48_RS21305 PF05746 DALR anticodon binding domain INR48_RS21310 PF02091 Glycyl-tRNA synthetase alpha subunit INR48_RS21315 PF13983 YsaB-like lipoprotein INR48_RS21320 PF01757 Acyltransferase family INR48_RS21325 PF05360 yiaA/B two helix domain INR48_RS21330 PF05360 yiaA/B two helix domain INR48_RS21335 PF00370 FGGY family of carbohydrate kinases, N-terminal domain INR48_RS21335 PF02782 FGGY family of carbohydrate kinases, C-terminal domain INR48_RS21345 PF13407 Periplasmic binding protein domain INR48_RS21350 PF00005 ABC transporter INR48_RS21355 PF02653 Branched-chain amino acid transport system / permease component INR48_RS21360 PF12833 Helix-turn-helix domain INR48_RS21365 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase INR48_RS21370 PF00128 Alpha amylase, catalytic domain INR48_RS21375 PF00155 Aminotransferase class I and II INR48_RS21380 PF13247 4Fe-4S dicluster domain INR48_RS21385 PF09339 IclR helix-turn-helix domain INR48_RS21385 PF01614 Bacterial transcriptional regulator INR48_RS21390 PF02615 Malate/L-lactate dehydrogenase INR48_RS21395 PF04074 YhcH/YjgK/YiaL INR48_RS21400 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component INR48_RS21405 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component INR48_RS21410 PF03480 Bacterial extracellular solute-binding protein, family 7 INR48_RS21415 PF00370 FGGY family of carbohydrate kinases, N-terminal domain INR48_RS21415 PF02782 FGGY family of carbohydrate kinases, C-terminal domain INR48_RS21420 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family INR48_RS21425 PF01261 Xylose isomerase-like TIM barrel INR48_RS21430 PF00596 Class II Aldolase and Adducin N-terminal domain INR48_RS21445 PF07944 Beta-L-arabinofuranosidase, GH127 INR48_RS21450 PF01381 Helix-turn-helix INR48_RS21450 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system INR48_RS21460 PF00171 Aldehyde dehydrogenase family INR48_RS21465 PF00465 Iron-containing alcohol dehydrogenase INR48_RS21470 PF09106 Elongation factor SelB, winged helix INR48_RS21470 PF03144 Elongation factor Tu domain 2 INR48_RS21470 PF00009 Elongation factor Tu GTP binding domain INR48_RS21470 PF09107 Elongation factor SelB, winged helix INR48_RS21475 PF03841 L-seryl-tRNA selenium transferase INR48_RS21475 PF12390 Selenocysteine synthase N terminal INR48_RS21480 PF00043 Glutathione S-transferase, C-terminal domain INR48_RS21480 PF13417 Glutathione S-transferase, N-terminal domain INR48_RS21485 PF00529 HlyD membrane-fusion protein of T1SS INR48_RS21485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INR48_RS21490 PF11742 Protein of unknown function (DUF3302) INR48_RS21495 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit INR48_RS21495 PF02378 Phosphotransferase system, EIIC INR48_RS21495 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INR48_RS21500 PF01232 Mannitol dehydrogenase Rossmann domain INR48_RS21500 PF08125 Mannitol dehydrogenase C-terminal domain INR48_RS21505 PF05068 Mannitol repressor INR48_RS21515 PF10928 Protein of unknown function (DUF2810) INR48_RS21520 PF11622 Protein of unknown function (DUF3251) INR48_RS21525 PF05662 Coiled stalk of trimeric autotransporter adhesin INR48_RS21525 PF05658 Head domain of trimeric autotransporter adhesin INR48_RS21525 PF03895 YadA-like membrane anchor domain INR48_RS21525 PF13018 Extended Signal Peptide of Type V secretion system INR48_RS21530 PF02652 L-lactate permease INR48_RS21535 PF00392 Bacterial regulatory proteins, gntR family INR48_RS21535 PF07729 FCD domain INR48_RS21540 PF01070 FMN-dependent dehydrogenase INR48_RS21545 PF00588 SpoU rRNA Methylase family INR48_RS21555 PF06426 Serine acetyltransferase, N-terminal INR48_RS21555 PF00132 Bacterial transferase hexapeptide (six repeats) INR48_RS21560 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus INR48_RS21560 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus INR48_RS21565 PF02556 Preprotein translocase subunit SecB INR48_RS21570 PF00462 Glutaredoxin INR48_RS21575 PF00581 Rhodanese-like domain INR48_RS21580 PF01676 Metalloenzyme superfamily INR48_RS21580 PF06415 BPG-independent PGAM N-terminus (iPGM_N) INR48_RS21585 PF01551 Peptidase family M23 INR48_RS21590 PF04748 Divergent polysaccharide deacetylase INR48_RS21595 PF00535 Glycosyl transferase family 2 INR48_RS21600 PF08240 Alcohol dehydrogenase GroES-like domain INR48_RS21600 PF00107 Zinc-binding dehydrogenase INR48_RS21605 PF00155 Aminotransferase class I and II INR48_RS21610 PF09612 Bacterial protein of unknown function (HtrL_YibB) INR48_RS21615 PF01370 NAD dependent epimerase/dehydratase family INR48_RS21620 PF01075 Glycosyltransferase family 9 (heptosyltransferase) INR48_RS21625 PF01075 Glycosyltransferase family 9 (heptosyltransferase) INR48_RS21630 PF04932 O-Antigen ligase INR48_RS21635 PF00534 Glycosyl transferases group 1 INR48_RS21640 PF08437 Glycosyl transferase family 8 C-terminal INR48_RS21640 PF01501 Glycosyl transferase family 8 INR48_RS21645 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) INR48_RS21650 PF08437 Glycosyl transferase family 8 C-terminal INR48_RS21650 PF01501 Glycosyl transferase family 8 INR48_RS21660 PF00534 Glycosyl transferases group 1 INR48_RS21660 PF13439 Glycosyltransferase Family 4 INR48_RS21665 PF01075 Glycosyltransferase family 9 (heptosyltransferase) INR48_RS21670 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) INR48_RS21675 PF01467 Cytidylyltransferase-like INR48_RS21680 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain INR48_RS21680 PF06827 Zinc finger found in FPG and IleRS INR48_RS21680 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain INR48_RS21685 PF00471 Ribosomal protein L33 INR48_RS21690 PF00830 Ribosomal L28 family INR48_RS21695 PF04002 RadC-like JAB domain INR48_RS21700 PF02441 Flavoprotein INR48_RS21700 PF04127 DNA / pantothenate metabolism flavoprotein INR48_RS21705 PF00692 dUTPase INR48_RS21710 PF00440 Bacterial regulatory proteins, tetR family INR48_RS21715 PF00156 Phosphoribosyl transferase domain INR48_RS21720 PF01138 3' exoribonuclease family, domain 1 INR48_RS21720 PF03725 3' exoribonuclease family, domain 2 INR48_RS21725 PF08340 Domain of unknown function (DUF1732) INR48_RS21725 PF03755 YicC-like family, N-terminal region INR48_RS21735 PF03458 UPF0126 domain INR48_RS21740 PF01653 NAD-dependent DNA ligase adenylation domain INR48_RS21740 PF03120 NAD-dependent DNA ligase OB-fold domain INR48_RS21745 PF00625 Guanylate kinase INR48_RS21750 PF01192 RNA polymerase Rpb6 INR48_RS21755 PF13291 ACT domain INR48_RS21755 PF04607 Region found in RelA / SpoT proteins INR48_RS21755 PF02824 TGS domain INR48_RS21760 PF00588 SpoU rRNA Methylase family INR48_RS21760 PF12105 SpoU, rRNA methylase, C-terminal INR48_RS21765 PF00270 DEAD/DEAH box helicase INR48_RS21765 PF00271 Helicase conserved C-terminal domain INR48_RS21765 PF17191 RecG wedge domain INR48_RS21770 PF03616 Sodium/glutamate symporter INR48_RS21775 PF00860 Permease family INR48_RS21780 PF05170 AsmA family INR48_RS21785 PF01055 Glycosyl hydrolases family 31 INR48_RS21785 PF13802 Galactose mutarotase-like INR48_RS21805 PF07690 Major Facilitator Superfamily INR48_RS21810 PF00892 EamA-like transporter family INR48_RS21815 PF03180 NLPA lipoprotein INR48_RS21825 PF07720 Tetratricopeptide repeat INR48_RS21840 PF06511 Type III secretion systems tip complex components INR48_RS21845 PF00486 Transcriptional regulatory protein, C terminal INR48_RS21850 PF09134 Invasin, domain 3 INR48_RS21850 PF11924 Inverse autotransporter, beta-domain INR48_RS21850 PF02369 Bacterial Ig-like domain (group 1) INR48_RS21855 PF07690 Major Facilitator Superfamily INR48_RS21870 PF06711 Protein of unknown function (DUF1198) INR48_RS21875 PF00860 Permease family INR48_RS21880 PF13382 Adenine deaminase C-terminal domain INR48_RS21880 PF01979 Amidohydrolase family INR48_RS21885 PF01797 Transposase IS200 like INR48_RS21890 PF07690 Major Facilitator Superfamily INR48_RS21895 PF07690 Major Facilitator Superfamily INR48_RS21900 PF07730 Histidine kinase INR48_RS21900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS21900 PF05231 MASE1 INR48_RS21905 PF00196 Bacterial regulatory proteins, luxR family INR48_RS21905 PF00072 Response regulator receiver domain INR48_RS21920 PF01842 ACT domain INR48_RS21925 PF00205 Thiamine pyrophosphate enzyme, central domain INR48_RS21925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INR48_RS21925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INR48_RS21930 PF08049 IlvB leader peptide INR48_RS21935 PF13939 Toxin TisB, type I toxin-antitoxin system INR48_RS21940 PF07690 Major Facilitator Superfamily INR48_RS21950 PF02656 Domain of unknown function (DUF202) INR48_RS21955 PF02656 Domain of unknown function (DUF202) INR48_RS21965 PF16347 Domain of unknown function (DUF4976) INR48_RS21965 PF00884 Sulfatase INR48_RS21975 PF02311 AraC-like ligand binding domain INR48_RS21975 PF12833 Helix-turn-helix domain INR48_RS21980 PF11975 Family 4 glycosyl hydrolase C-terminal domain INR48_RS21980 PF02056 Family 4 glycosyl hydrolase INR48_RS21985 PF00367 phosphotransferase system, EIIB INR48_RS21985 PF02378 Phosphotransferase system, EIIC INR48_RS21990 PF00392 Bacterial regulatory proteins, gntR family INR48_RS21990 PF07702 UTRA domain INR48_RS21995 PF06826 Predicted Permease Membrane Region INR48_RS21995 PF02080 TrkA-C domain INR48_RS22000 PF00011 Hsp20/alpha crystallin family INR48_RS22005 PF00011 Hsp20/alpha crystallin family INR48_RS22010 PF07119 Protein of unknown function (DUF1375) INR48_RS22015 PF12566 Protein of unknown function (DUF3748) INR48_RS22015 PF07676 WD40-like Beta Propeller Repeat INR48_RS22020 PF01494 FAD binding domain INR48_RS22025 PF07690 Major Facilitator Superfamily INR48_RS22030 PF13378 Enolase C-terminal domain-like INR48_RS22030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain INR48_RS22035 PF01081 KDPG and KHG aldolase INR48_RS22040 PF05035 2-keto-3-deoxy-galactonokinase INR48_RS22045 PF00392 Bacterial regulatory proteins, gntR family INR48_RS22045 PF07729 FCD domain INR48_RS22060 PF06078 Bacterial protein of unknown function (DUF937) INR48_RS22065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS22065 PF00986 DNA gyrase B subunit, carboxyl terminus INR48_RS22065 PF18053 DNA gyrase B subunit insert domain INR48_RS22065 PF01751 Toprim domain INR48_RS22065 PF00204 DNA gyrase B INR48_RS22070 PF02463 RecF/RecN/SMC N terminal domain INR48_RS22075 PF02768 DNA polymerase III beta subunit, C-terminal domain INR48_RS22075 PF02767 DNA polymerase III beta subunit, central domain INR48_RS22075 PF00712 DNA polymerase III beta subunit, N-terminal domain INR48_RS22080 PF00308 Bacterial dnaA protein INR48_RS22080 PF08299 Bacterial dnaA protein helix-turn-helix INR48_RS22080 PF11638 DnaA N-terminal domain INR48_RS22090 PF00468 Ribosomal protein L34 INR48_RS22095 PF00825 Ribonuclease P INR48_RS22100 PF01809 Putative membrane protein insertion efficiency factor INR48_RS22105 PF14849 YidC periplasmic domain INR48_RS22105 PF02096 60Kd inner membrane protein INR48_RS22110 PF12631 MnmE helical domain INR48_RS22110 PF01926 50S ribosome-binding GTPase INR48_RS22110 PF10396 GTP-binding protein TrmE N-terminus INR48_RS22115 PF08053 Tryptophanase operon leader peptide INR48_RS22120 PF01212 Beta-eliminating lyase INR48_RS22125 PF03222 Tryptophan/tyrosine permease family INR48_RS22130 PF07690 Major Facilitator Superfamily INR48_RS22135 PF03466 LysR substrate binding domain INR48_RS22135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS22145 PF03358 NADPH-dependent FMN reductase INR48_RS22150 PF00860 Permease family INR48_RS22155 PF13419 Haloacid dehalogenase-like hydrolase INR48_RS22175 PF01895 PhoU domain INR48_RS22180 PF00005 ABC transporter INR48_RS22185 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS22190 PF00528 Binding-protein-dependent transport system inner membrane component INR48_RS22195 PF12849 PBP superfamily domain INR48_RS22205 PF13953 PapC C-terminal domain INR48_RS22205 PF13954 PapC N-terminal domain INR48_RS22205 PF00577 Outer membrane usher protein INR48_RS22210 PF02753 Pili assembly chaperone PapD, C-terminal domain INR48_RS22210 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain INR48_RS22215 PF00419 Fimbrial protein INR48_RS22220 PF01380 SIS domain INR48_RS22225 PF12804 MobA-like NTP transferase domain INR48_RS22225 PF14602 Hexapeptide repeat of succinyl-transferase INR48_RS22225 PF00132 Bacterial transferase hexapeptide (six repeats) INR48_RS22230 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain INR48_RS22230 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain INR48_RS22235 PF02874 ATP synthase alpha/beta family, beta-barrel domain INR48_RS22235 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain INR48_RS22240 PF00231 ATP synthase INR48_RS22245 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain INR48_RS22245 PF00306 ATP synthase alpha/beta chain, C terminal domain INR48_RS22245 PF02874 ATP synthase alpha/beta family, beta-barrel domain INR48_RS22250 PF00213 ATP synthase delta (OSCP) subunit INR48_RS22255 PF00430 ATP synthase B/B' CF(0) INR48_RS22260 PF00137 ATP synthase subunit C INR48_RS22265 PF00119 ATP synthase A chain INR48_RS22270 PF03899 ATP synthase I chain INR48_RS22275 PF02527 rRNA small subunit methyltransferase G INR48_RS22280 PF01134 Glucose inhibited division protein A INR48_RS22280 PF13932 GidA associated domain INR48_RS22285 PF00258 Flavodoxin INR48_RS22290 PF01037 Lrp/AsnC ligand binding domain INR48_RS22295 PF03590 Aspartate-ammonia ligase INR48_RS22300 PF05762 VWA domain containing CoxE-like protein INR48_RS22305 PF17868 AAA lid domain INR48_RS22305 PF07728 AAA domain (dynein-related subfamily) INR48_RS22305 PF12592 Protein of unknown function (DUF3763) INR48_RS22310 PF02705 K+ potassium transporter INR48_RS22315 PF05025 RbsD / FucU transport protein family INR48_RS22320 PF00005 ABC transporter INR48_RS22325 PF02653 Branched-chain amino acid transport system / permease component INR48_RS22330 PF13407 Periplasmic binding protein domain INR48_RS22335 PF00294 pfkB family carbohydrate kinase INR48_RS22340 PF00356 Bacterial regulatory proteins, lacI family INR48_RS22345 PF07690 Major Facilitator Superfamily INR48_RS22350 PF07729 FCD domain INR48_RS22350 PF00392 Bacterial regulatory proteins, gntR family INR48_RS22385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS22385 PF03466 LysR substrate binding domain INR48_RS22390 PF04219 Protein of unknown function, DUF INR48_RS22395 PF01078 Magnesium chelatase, subunit ChlI INR48_RS22395 PF13335 Magnesium chelatase, subunit ChlI C-terminal INR48_RS22400 PF08046 IlvGEDA operon leader peptide INR48_RS22410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INR48_RS22410 PF00205 Thiamine pyrophosphate enzyme, central domain INR48_RS22410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INR48_RS22420 PF01063 Amino-transferase class IV INR48_RS22425 PF00920 Dehydratase family INR48_RS22430 PF00585 C-terminal regulatory domain of Threonine dehydratase INR48_RS22430 PF00291 Pyridoxal-phosphate dependent enzyme INR48_RS22435 PF03466 LysR substrate binding domain INR48_RS22435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS22440 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain INR48_RS22440 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain INR48_RS22450 PF13361 UvrD-like helicase C-terminal domain INR48_RS22450 PF00580 UvrD/REP helicase N-terminal domain INR48_RS22455 PF02541 Ppx/GppA phosphatase family INR48_RS22460 PF00271 Helicase conserved C-terminal domain INR48_RS22460 PF00270 DEAD/DEAH box helicase INR48_RS22465 PF00085 Thioredoxin INR48_RS22475 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain INR48_RS22475 PF07497 Rho termination factor, RNA-binding domain INR48_RS22475 PF07498 Rho termination factor, N-terminal domain INR48_RS22480 PF00953 Glycosyl transferase family 4 INR48_RS22485 PF02706 Chain length determinant protein INR48_RS22490 PF02350 UDP-N-acetylglucosamine 2-epimerase INR48_RS22495 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain INR48_RS22495 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain INR48_RS22495 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain INR48_RS22500 PF16363 GDP-mannose 4,6 dehydratase INR48_RS22505 PF00483 Nucleotidyl transferase INR48_RS22515 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family INR48_RS22520 PF01943 Polysaccharide biosynthesis protein INR48_RS22525 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 INR48_RS22530 PF06899 WzyE protein, O-antigen assembly polymerase INR48_RS22535 PF03808 Glycosyl transferase WecB/TagA/CpsF family INR48_RS22540 PF00324 Amino acid permease INR48_RS22565 PF13186 Iron-sulfur cluster-binding domain INR48_RS22565 PF04055 Radical SAM superfamily INR48_RS22575 PF00884 Sulfatase INR48_RS22580 PF07719 Tetratricopeptide repeat INR48_RS22580 PF07219 HemY protein N-terminus INR48_RS22585 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase INR48_RS22590 PF02602 Uroporphyrinogen-III synthase HemD INR48_RS22595 PF03900 Porphobilinogen deaminase, C-terminal domain INR48_RS22595 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain INR48_RS22600 PF01295 Adenylate cyclase, class-I INR48_RS22600 PF12633 Adenylate cyclase NT domain INR48_RS22605 PF01491 Frataxin-like domain INR48_RS22615 PF13627 Prokaryotic lipoprotein-attachment site INR48_RS22620 PF01678 Diaminopimelate epimerase INR48_RS22625 PF04340 Protein of unknown function, DUF484 INR48_RS22630 PF00589 Phage integrase family INR48_RS22630 PF02899 Phage integrase, N-terminal SAM-like domain INR48_RS22635 PF13419 Haloacid dehalogenase-like hydrolase INR48_RS22640 PF00580 UvrD/REP helicase N-terminal domain INR48_RS22640 PF13361 UvrD-like helicase C-terminal domain INR48_RS22650 PF09992 Phosphodiester glycosidase INR48_RS22655 PF01544 CorA-like Mg2+ transporter protein INR48_RS22660 PF10947 Protein of unknown function (DUF2628) INR48_RS22670 PF00892 EamA-like transporter family INR48_RS22675 PF03061 Thioesterase superfamily INR48_RS22680 PF02253 Phospholipase A1 INR48_RS22685 PF00270 DEAD/DEAH box helicase INR48_RS22685 PF16124 RecQ zinc-binding INR48_RS22685 PF00570 HRDC domain INR48_RS22685 PF09382 RQC domain INR48_RS22685 PF00271 Helicase conserved C-terminal domain INR48_RS22690 PF01810 LysE type translocator INR48_RS22695 PF01810 LysE type translocator INR48_RS22700 PF12146 Serine aminopeptidase, S33 INR48_RS22710 PF00892 EamA-like transporter family INR48_RS22715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INR48_RS22715 PF03466 LysR substrate binding domain INR48_RS22720 PF08267 Cobalamin-independent synthase, N-terminal domain INR48_RS22720 PF01717 Cobalamin-independent synthase, Catalytic domain INR48_RS22725 PF01738 Dienelactone hydrolase family INR48_RS22730 PF01048 Phosphorylase superfamily INR48_RS22735 PF02646 RmuC family INR48_RS22740 PF01209 ubiE/COQ5 methyltransferase family INR48_RS22745 PF02036 SCP-2 sterol transfer family INR48_RS22750 PF03109 ABC1 family INR48_RS22755 PF02416 mttA/Hcf106 family INR48_RS22765 PF00902 Sec-independent protein translocase protein (TatC) INR48_RS22770 PF01026 TatD related DNase INR48_RS22775 PF02357 Transcription termination factor nusG INR48_RS22780 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase INR48_RS22785 PF00970 Oxidoreductase FAD-binding domain INR48_RS22785 PF00175 Oxidoreductase NAD-binding domain INR48_RS22790 PF00108 Thiolase, N-terminal domain INR48_RS22790 PF02803 Thiolase, C-terminal domain INR48_RS22795 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain INR48_RS22795 PF00378 Enoyl-CoA hydratase/isomerase INR48_RS22795 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain INR48_RS22800 PF00557 Metallopeptidase family M24 INR48_RS22805 PF09186 Domain of unknown function (DUF1949) INR48_RS22805 PF01205 Uncharacterized protein family UPF0029 INR48_RS22810 PF02386 Cation transport protein INR48_RS22815 PF12724 Flavodoxin domain INR48_RS22845 PF03205 Molybdopterin guanine dinucleotide synthesis protein B INR48_RS22850 PF12804 MobA-like NTP transferase domain INR48_RS22855 PF06288 Protein of unknown function (DUF1040) INR48_RS22860 PF01636 Phosphotransferase enzyme family INR48_RS22865 PF01323 DSBA-like thioredoxin domain INR48_RS22870 PF06097 Bacterial protein of unknown function (DUF945) INR48_RS22875 PF01553 Acyltransferase INR48_RS22880 PF00476 DNA polymerase family A INR48_RS22880 PF01612 3'-5' exonuclease INR48_RS22880 PF01367 5'-3' exonuclease, C-terminal SAM fold INR48_RS22880 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain INR48_RS22885 PF01926 50S ribosome-binding GTPase INR48_RS22890 PF04220 Der GTPase activator (YihI) INR48_RS22895 PF04055 Radical SAM superfamily INR48_RS22895 PF06969 HemN C-terminal domain INR48_RS22905 PF00158 Sigma-54 interaction domain INR48_RS22905 PF00072 Response regulator receiver domain INR48_RS22905 PF02954 Bacterial regulatory protein, Fis family INR48_RS22910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS22910 PF00512 His Kinase A (phospho-acceptor) domain INR48_RS22910 PF00989 PAS fold INR48_RS22915 PF03951 Glutamine synthetase, beta-Grasp domain INR48_RS22915 PF00120 Glutamine synthetase, catalytic domain INR48_RS22920 PF03144 Elongation factor Tu domain 2 INR48_RS22920 PF00679 Elongation factor G C-terminus INR48_RS22920 PF00009 Elongation factor Tu GTP binding domain INR48_RS22925 PF07702 UTRA domain INR48_RS22925 PF00392 Bacterial regulatory proteins, gntR family INR48_RS22945 PF07690 Major Facilitator Superfamily INR48_RS22950 PF06178 Oligogalacturonate-specific porin protein (KdgM) INR48_RS22965 PF01055 Glycosyl hydrolases family 31 INR48_RS22970 PF01263 Aldose 1-epimerase INR48_RS22980 PF01791 DeoC/LacD family aldolase INR48_RS22985 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase INR48_RS22985 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase INR48_RS22990 PF00294 pfkB family carbohydrate kinase INR48_RS22995 PF08220 DeoR-like helix-turn-helix domain INR48_RS22995 PF00455 DeoR C terminal sensor domain INR48_RS23000 PF13419 Haloacid dehalogenase-like hydrolase INR48_RS23005 PF03631 Virulence factor BrkB INR48_RS23010 PF02580 D-Tyr-tRNA(Tyr) deacylase INR48_RS23015 PF00583 Acetyltransferase (GNAT) family INR48_RS23015 PF09500 Putative thioesterase (yiiD_Cterm) INR48_RS23025 PF01402 Ribbon-helix-helix protein, copG family INR48_RS23035 PF04216 Protein involved in formate dehydrogenase formation INR48_RS23040 PF01292 Prokaryotic cytochrome b561 INR48_RS23045 PF09163 Formate dehydrogenase N, transmembrane INR48_RS23045 PF13247 4Fe-4S dicluster domain INR48_RS23055 PF02634 FdhD/NarQ family INR48_RS23060 PF12889 Protein of unknown function (DUF3829) INR48_RS23070 PF05336 L-rhamnose mutarotase INR48_RS23075 PF00596 Class II Aldolase and Adducin N-terminal domain INR48_RS23080 PF06134 L-rhamnose isomerase (RhaA) INR48_RS23085 PF02782 FGGY family of carbohydrate kinases, C-terminal domain INR48_RS23085 PF00370 FGGY family of carbohydrate kinases, N-terminal domain INR48_RS23090 PF02311 AraC-like ligand binding domain INR48_RS23090 PF12833 Helix-turn-helix domain INR48_RS23095 PF12833 Helix-turn-helix domain INR48_RS23095 PF02311 AraC-like ligand binding domain INR48_RS23100 PF06379 L-rhamnose-proton symport protein (RhaT) INR48_RS23105 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain INR48_RS23105 PF02777 Iron/manganese superoxide dismutases, C-terminal domain INR48_RS23110 PF03812 2-keto-3-deoxygluconate permease INR48_RS23115 PF03475 3-alpha domain INR48_RS23115 PF03473 MOSC domain INR48_RS23120 PF00672 HAMP domain INR48_RS23120 PF00512 His Kinase A (phospho-acceptor) domain INR48_RS23120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INR48_RS23120 PF16527 Two-component sensor protein CpxA, periplasmic domain INR48_RS23125 PF00486 Transcriptional regulatory protein, C terminal INR48_RS23125 PF00072 Response regulator receiver domain INR48_RS23130 PF07813 LTXXQ motif family protein INR48_RS23145 PF02899 Phage integrase, N-terminal SAM-like domain INR48_RS23145 PF00589 Phage integrase family INR48_RS23180 PF01051 Initiator Replication protein INR48_RS23185 PF00589 Phage integrase family INR48_RS23195 PF12833 Helix-turn-helix domain INR48_RS23230 PF00005 ABC transporter INR48_RS23230 PF00664 ABC transporter transmembrane region INR48_RS23245 PF05717 IS66 Orf2 like protein INR48_RS23265 PF07362 Post-segregation antitoxin CcdA INR48_RS23270 PF01845 CcdB protein INR48_RS23280 PF01051 Initiator Replication protein INR48_RS23285 PF13614 AAA domain INR48_RS23290 PF18090 Centromere-binding protein HTH domain INR48_RS23290 PF02195 ParB-like nuclease domain INR48_RS23315 PF07128 Protein of unknown function (DUF1380) INR48_RS23325 PF03230 Antirestriction protein INR48_RS23330 PF07128 Protein of unknown function (DUF1380) INR48_RS23365 PF00436 Single-strand binding protein family INR48_RS23370 PF06006 Bacterial protein of unknown function (DUF905) INR48_RS23380 PF06290 Plasmid SOS inhibition protein (PsiB) INR48_RS23385 PF06952 PsiA protein INR48_RS23390 PF01848 Hok/gef family INR48_RS23405 PF06067 Domain of unknown function (DUF932) INR48_RS23410 PF01464 Transglycosylase SLT domain INR48_RS23415 PF05261 TraM protein, DNA-binding INR48_RS23425 PF05509 TraY domain INR48_RS23430 PF05513 TraA INR48_RS23435 PF07178 TraL protein INR48_RS23440 PF05309 TraE protein INR48_RS23445 PF06586 TraK protein INR48_RS23450 PF03743 Bacterial conjugation TrbI-like protein INR48_RS23465 PF07296 TraP protein INR48_RS23470 PF10894 Protein of unknown function (DUF2689) INR48_RS23480 PF09676 Type IV conjugative transfer system lipoprotein (TraV) INR48_RS23485 PF01258 Prokaryotic dksA/traR C4-type zinc finger INR48_RS23490 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer INR48_RS23495 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) INR48_RS23500 PF12477 Sex factor F TraW protein N terminal INR48_RS23505 PF06834 TraU protein INR48_RS23510 PF09673 Type-F conjugative transfer system pilin assembly protein INR48_RS23515 PF06986 Type-1V conjugative transfer system mating pair stabilisation INR48_RS23520 PF11100 Conjugal transfer protein TrbE INR48_RS23525 PF13728 F plasmid transfer operon protein INR48_RS23540 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) INR48_RS23545 PF13728 F plasmid transfer operon protein INR48_RS23560 PF06122 Conjugative relaxosome accessory transposon protein INR48_RS23565 PF07916 TraG-like protein, N-terminal region INR48_RS23575 PF05818 Enterobacterial TraT complement resistance protein INR48_RS23580 PF12615 F sex factor protein N terminal INR48_RS23580 PF10412 Type IV secretion-system coupling protein DNA-binding domain INR48_RS23585 PF01850 PIN domain INR48_RS23590 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin INR48_RS23595 PF18340 DNA relaxase TraI 2B/2B-like domain INR48_RS23595 PF07057 DNA helicase TraI INR48_RS23595 PF08751 TrwC relaxase INR48_RS23595 PF18272 single-stranded DNA binding TraI N-terminal subdomain INR48_RS23600 PF05857 TraX protein INR48_RS23610 PF04352 ProQ/FINO family INR48_RS23610 PF12602 Fertility inhibition protein N terminal INR48_RS23625 PF05717 IS66 Orf2 like protein INR48_RS23635 PF01075 Glycosyltransferase family 9 (heptosyltransferase) INR48_RS23640 PF16168 Adhesin of bacterial autotransporter system, probable stalk INR48_RS23640 PF03212 Pertactin INR48_RS23640 PF03797 Autotransporter beta-domain INR48_RS23640 PF13018 Extended Signal Peptide of Type V secretion system INR48_RS23650 PF16549 Type II secretion system (T2SS) pilotin, S protein INR48_RS23655 PF11356 Type II secretion system protein C INR48_RS23660 PF00263 Bacterial type II and III secretion system protein INR48_RS23660 PF03958 Bacterial type II/III secretion system short domain INR48_RS23665 PF00437 Type II/IV secretion system protein INR48_RS23670 PF00482 Type II secretion system (T2SS), protein F INR48_RS23675 PF08334 Type II secretion system (T2SS), protein G INR48_RS23675 PF07963 Prokaryotic N-terminal methylation motif INR48_RS23680 PF12019 Type II transport protein GspH INR48_RS23685 PF07963 Prokaryotic N-terminal methylation motif INR48_RS23685 PF02501 Type II secretion system (T2SS), protein I INR48_RS23690 PF11612 Type II secretion system (T2SS), protein J INR48_RS23690 PF07963 Prokaryotic N-terminal methylation motif INR48_RS23695 PF03934 Type II secretion system (T2SS), protein K INR48_RS23700 PF12693 GspL periplasmic domain INR48_RS23705 PF04612 Type II secretion system (T2SS), protein M INR48_RS23715 PF01375 Heat-labile enterotoxin alpha chain INR48_RS23720 PF06453 Type II heat-labile enterotoxin , B subunit (LT-IIB) INR48_RS23745 PF09075 Heat-stable enterotoxin B, secretory INR48_RS23760 PF08534 Redoxin INR48_RS23795 PF00561 alpha/beta hydrolase fold INR48_RS23815 PF00756 Putative esterase INR48_RS23830 PF02652 L-lactate permease INR48_RS23835 PF00392 Bacterial regulatory proteins, gntR family INR48_RS23835 PF07729 FCD domain INR48_RS23850 PF00665 Integrase core domain INR48_RS23850 PF13936 Helix-turn-helix domain INR48_RS23875 PF13936 Helix-turn-helix domain INR48_RS23875 PF00665 Integrase core domain INR48_RS23890 PF05016 ParE toxin of type II toxin-antitoxin system, parDE INR48_RS23905 PF00436 Single-strand binding protein family INR48_RS23960 PF02796 Helix-turn-helix domain of resolvase INR48_RS23960 PF00239 Resolvase, N terminal domain INR48_RS23965 PF07484 Phage Tail Collar Domain INR48_RS23970 PF07484 Phage Tail Collar Domain INR48_RS23975 PF02413 Caudovirales tail fibre assembly protein, lambda gpK INR48_RS23980 PF07484 Phage Tail Collar Domain INR48_RS23985 PF07484 Phage Tail Collar Domain INR48_RS23990 PF07484 Phage Tail Collar Domain INR48_RS23995 PF07484 Phage Tail Collar Domain INR48_RS24020 PF01464 Transglycosylase SLT domain INR48_RS24075 PF01848 Hok/gef family INR48_RS24105 PF02195 ParB-like nuclease domain INR48_RS24105 PF08775 ParB family INR48_RS24110 PF13614 AAA domain INR48_RS24110 PF18607 ParA helix turn helix domain INR48_RS24120 PF01051 Initiator Replication protein INR48_RS24150 PF04381 Putative exonuclease, RdgC INR48_RS24155 PF02086 D12 class N6 adenine-specific DNA methyltransferase INR48_RS24185 PF00772 DnaB-like helicase N terminal domain INR48_RS24185 PF03796 DnaB-like helicase C terminal domain INR48_RS24245 PF00149 Calcineurin-like phosphoesterase INR48_RS24360 PF00717 Peptidase S24-like INR48_RS24465 PF02387 IncFII RepA protein family INR48_RS24470 PF12323 Helix-turn-helix domain INR48_RS24470 PF07282 Putative transposase DNA-binding domain INR48_RS24470 PF01385 Probable transposase INR48_RS24475 PF01848 Hok/gef family INR48_RS24490 PF07015 VirC1 protein INR48_RS24595 PF05321 Haemolysin expression modulating protein INR48_RS24610 PF01131 DNA topoisomerase INR48_RS24610 PF01751 Toprim domain INR48_RS24630 PF00565 Staphylococcal nuclease homologue INR48_RS24640 PF00589 Phage integrase family INR48_RS24645 PF04917 Bacterial shufflon protein, N-terminal constant region INR48_RS24650 PF04917 Bacterial shufflon protein, N-terminal constant region INR48_RS24655 PF04917 Bacterial shufflon protein, N-terminal constant region INR48_RS24680 PF00437 Type II/IV secretion system protein INR48_RS24700 PF00005 ABC transporter INR48_RS24700 PF03412 Peptidase C39 family INR48_RS24700 PF00664 ABC transporter transmembrane region INR48_RS24705 PF02534 Type IV secretory system Conjugative DNA transfer INR48_RS24710 PF00437 Type II/IV secretion system protein INR48_RS24715 PF03743 Bacterial conjugation TrbI-like protein INR48_RS24730 PF03135 CagE, TrbE, VirB family, component of type IV transporter system INR48_RS24825 PF16200 C-terminal region of band_7 INR48_RS24825 PF01145 SPFH domain / Band 7 family