A9Z04_RS00045 SM00530 Helix-turn-helix XRE-family like proteins A9Z04_RS00095 SM00530 Helix-turn-helix XRE-family like proteins A9Z04_RS00115 SM00530 Helix-turn-helix XRE-family like proteins A9Z04_RS00140 SM00267 diguanylate cyclase A9Z04_RS00175 SM00347 helix_turn_helix multiple antibiotic resistance protein A9Z04_RS00180 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS00215 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9Z04_RS00215 SM00866 A9Z04_RS00215 A9Z04_RS00235 SM00267 diguanylate cyclase A9Z04_RS00255 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9Z04_RS00255 SM00895 A9Z04_RS00255 A9Z04_RS00280 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A9Z04_RS00310 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A9Z04_RS00315 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A9Z04_RS00395 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A9Z04_RS00395 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A9Z04_RS00420 SM00448 cheY-homologous receiver domain A9Z04_RS00420 SM00862 Transcriptional regulatory protein, C terminal A9Z04_RS00425 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9Z04_RS00425 SM00387 Histidine kinase-like ATPases A9Z04_RS00425 SM00388 His Kinase A (phosphoacceptor) domain A9Z04_RS00480 SM00354 helix_turn _helix lactose operon repressor A9Z04_RS00540 SM00900 A9Z04_RS00540 A9Z04_RS00550 SM00478 endonuclease III A9Z04_RS00550 SM00525 A9Z04_RS00550 A9Z04_RS00575 SM00363 S4 RNA-binding domain A9Z04_RS00600 SM00347 helix_turn_helix multiple antibiotic resistance protein A9Z04_RS00650 SM00479 A9Z04_RS00650 A9Z04_RS00685 SM00354 helix_turn _helix lactose operon repressor A9Z04_RS00760 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain A9Z04_RS00785 SM00257 Lysin motif A9Z04_RS00805 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS00870 SM00882 Coenzyme A transferase A9Z04_RS00880 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS00890 SM00893 Electron transfer flavoprotein domain A9Z04_RS00895 SM00893 Electron transfer flavoprotein domain A9Z04_RS00955 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS00970 SM00411 bacterial (prokaryotic) histone like domain A9Z04_RS00975 SM00873 B3/4 domain A9Z04_RS00975 SM00874 tRNA synthetase B5 domain A9Z04_RS00975 SM00896 Ferredoxin-fold anticodon binding domain A9Z04_RS01005 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A9Z04_RS01065 SM01060 A9Z04_RS01065 A9Z04_RS01080 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS01115 SM00465 GIY-YIG type nucleases (URI domain) A9Z04_RS01190 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS01195 SM00450 Rhodanese Homology Domain A9Z04_RS01215 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A9Z04_RS01220 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A9Z04_RS01220 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A9Z04_RS01220 SM00493 A9Z04_RS01220 A9Z04_RS01250 SM00870 A9Z04_RS01250 A9Z04_RS01265 SM00420 helix_turn_helix, Deoxyribose operon repressor A9Z04_RS01265 SM01134 A9Z04_RS01265 A9Z04_RS01285 SM00829 Enoylreductase A9Z04_RS01310 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A9Z04_RS01330 SM00763 PrkA AAA domain A9Z04_RS01340 SM00267 diguanylate cyclase A9Z04_RS01345 SM00267 diguanylate cyclase A9Z04_RS01365 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS01385 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A9Z04_RS01385 SM00267 diguanylate cyclase A9Z04_RS01425 SM00341 Helicase and RNase D C-terminal A9Z04_RS01425 SM00474 3'-5' exonuclease A9Z04_RS01445 SM00487 DEAD-like helicases superfamily A9Z04_RS01445 SM00491 A9Z04_RS01445 A9Z04_RS01485 SM00052 Putative diguanylate phosphodiesterase A9Z04_RS01490 SM01091 Transporter associated domain A9Z04_RS01535 SM00357 Cold shock protein domain A9Z04_RS01565 SM00346 helix_turn_helix isocitrate lyase regulation A9Z04_RS01580 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A9Z04_RS01580 SM00245 tail specific protease A9Z04_RS01585 SM00945 ProQ/FINO family A9Z04_RS01590 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A9Z04_RS01655 SM00479 A9Z04_RS01655 A9Z04_RS01725 SM00257 Lysin motif A9Z04_RS01735 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS01745 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS01750 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A9Z04_RS01825 SM00836 DALR anticodon binding domain A9Z04_RS01825 SM01016 Arginyl tRNA synthetase N terminal dom A9Z04_RS01850 SM00448 cheY-homologous receiver domain A9Z04_RS01855 SM00448 cheY-homologous receiver domain A9Z04_RS01860 SM00138 Methyltransferase, chemotaxis proteins A9Z04_RS01865 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9Z04_RS01865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9Z04_RS01865 SM00319 Homologues of the ligand binding domain of Tar A9Z04_RS01870 SM00260 Two component signalling adaptor domain A9Z04_RS01875 SM00073 Histidine Phosphotransfer domain A9Z04_RS01875 SM00260 Two component signalling adaptor domain A9Z04_RS01875 SM00387 Histidine kinase-like ATPases A9Z04_RS01875 SM01231 A9Z04_RS01875 A9Z04_RS01920 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS01990 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A9Z04_RS01990 SM00465 GIY-YIG type nucleases (URI domain) A9Z04_RS01995 SM00421 helix_turn_helix, Lux Regulon A9Z04_RS01995 SM00448 cheY-homologous receiver domain A9Z04_RS02010 SM00421 helix_turn_helix, Lux Regulon A9Z04_RS02015 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS02030 SM00062 Bacterial periplasmic substrate-binding proteins A9Z04_RS02030 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A9Z04_RS02065 SM00642 Alpha-amylase domain A9Z04_RS02095 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS02135 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS02185 SM00421 helix_turn_helix, Lux Regulon A9Z04_RS02205 SM00267 diguanylate cyclase A9Z04_RS02235 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9Z04_RS02260 SM00387 Histidine kinase-like ATPases A9Z04_RS02260 SM00388 His Kinase A (phosphoacceptor) domain A9Z04_RS02265 SM00448 cheY-homologous receiver domain A9Z04_RS02265 SM00862 Transcriptional regulatory protein, C terminal A9Z04_RS02270 SM00095 Transthyretin A9Z04_RS02325 SM00255 Toll - interleukin 1 - resistance A9Z04_RS02385 SM00528 Domain in histone-like proteins of HNS family A9Z04_RS02445 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS02450 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS02455 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS02460 SM00823 Phosphopantetheine attachment site A9Z04_RS02465 SM00822 A9Z04_RS02465 A9Z04_RS02465 SM00823 Phosphopantetheine attachment site A9Z04_RS02465 SM00824 Thioesterase A9Z04_RS02465 SM00825 Beta-ketoacyl synthase A9Z04_RS02465 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A9Z04_RS02500 SM00634 Bacterial Ig-like domain (group 1) A9Z04_RS02585 SM00825 Beta-ketoacyl synthase A9Z04_RS02605 SM00823 Phosphopantetheine attachment site A9Z04_RS02605 SM00825 Beta-ketoacyl synthase A9Z04_RS02610 SM00823 Phosphopantetheine attachment site A9Z04_RS02615 SM00825 Beta-ketoacyl synthase A9Z04_RS02615 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A9Z04_RS02620 SM00823 Phosphopantetheine attachment site A9Z04_RS02625 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A9Z04_RS02645 SM00823 Phosphopantetheine attachment site A9Z04_RS02645 SM00825 Beta-ketoacyl synthase A9Z04_RS02650 SM00822 A9Z04_RS02650 A9Z04_RS02650 SM00823 Phosphopantetheine attachment site A9Z04_RS02650 SM00825 Beta-ketoacyl synthase A9Z04_RS02650 SM00826 A9Z04_RS02650 A9Z04_RS02650 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A9Z04_RS02650 SM00829 Enoylreductase A9Z04_RS02655 SM00421 helix_turn_helix, Lux Regulon A9Z04_RS02705 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS02715 SM00877 A9Z04_RS02715 A9Z04_RS02720 SM00877 A9Z04_RS02720 A9Z04_RS02750 SM00877 A9Z04_RS02750 A9Z04_RS02755 SM00877 A9Z04_RS02755 A9Z04_RS02795 SM00877 A9Z04_RS02795 A9Z04_RS02800 SM00877 A9Z04_RS02800 A9Z04_RS02820 SM00871 Bacterial transcription activator, effector binding domain A9Z04_RS02825 SM00936 Penicillin-binding protein 5, C-terminal domain A9Z04_RS02830 SM00479 A9Z04_RS02830 A9Z04_RS02905 SM00984 UDP binding domain A9Z04_RS02910 SM01350 A9Z04_RS02910 A9Z04_RS03080 SM00226 Low molecular weight phosphatase family A9Z04_RS03090 SM00116 Domain in cystathionine beta-synthase and other proteins. A9Z04_RS03090 SM01091 Transporter associated domain A9Z04_RS03110 SM00052 Putative diguanylate phosphodiesterase A9Z04_RS03110 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A9Z04_RS03110 SM00091 PAS domain A9Z04_RS03110 SM00267 diguanylate cyclase A9Z04_RS03115 SM00478 endonuclease III A9Z04_RS03115 SM01009 AlkA N-terminal domain A9Z04_RS03135 SM00327 von Willebrand factor (vWF) type A domain A9Z04_RS03160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9Z04_RS03160 SM00387 Histidine kinase-like ATPases A9Z04_RS03160 SM00388 His Kinase A (phosphoacceptor) domain A9Z04_RS03165 SM00448 cheY-homologous receiver domain A9Z04_RS03165 SM00862 Transcriptional regulatory protein, C terminal A9Z04_RS03185 SM00046 Diacylglycerol kinase catalytic domain (presumed) A9Z04_RS03190 SM00420 helix_turn_helix, Deoxyribose operon repressor A9Z04_RS03190 SM01134 A9Z04_RS03190 A9Z04_RS03195 SM00829 Enoylreductase A9Z04_RS03225 SM01133 A9Z04_RS03225 A9Z04_RS03245 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9Z04_RS03245 SM00866 A9Z04_RS03245 A9Z04_RS03250 SM00641 Glycosyl hydrolases family 25 A9Z04_RS03320 SM00773 Proposed nucleic acid binding domain A9Z04_RS03340 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS03350 SM00327 von Willebrand factor (vWF) type A domain A9Z04_RS03370 SM00448 cheY-homologous receiver domain A9Z04_RS03370 SM00850 LytTr DNA-binding domain A9Z04_RS03375 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A9Z04_RS03380 SM00422 helix_turn_helix, mercury resistance A9Z04_RS03395 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS03410 SM01217 A9Z04_RS03410 A9Z04_RS03495 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS03505 SM00354 helix_turn _helix lactose operon repressor A9Z04_RS03560 SM00518 AP endonuclease family 2 A9Z04_RS03575 SM00100 Cyclic nucleotide-monophosphate binding domain A9Z04_RS03620 SM00841 Elongation factor P, C-terminal A9Z04_RS03620 SM01185 A9Z04_RS03620 A9Z04_RS03630 SM00833 Cobalamin synthesis protein cobW C-terminal domain A9Z04_RS03635 SM00014 Acid phosphatase homologues A9Z04_RS03645 SM00052 Putative diguanylate phosphodiesterase A9Z04_RS03665 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS03680 SM00363 S4 RNA-binding domain A9Z04_RS03685 SM00487 DEAD-like helicases superfamily A9Z04_RS03685 SM00490 helicase superfamily c-terminal domain A9Z04_RS03730 SM00421 helix_turn_helix, Lux Regulon A9Z04_RS03730 SM00448 cheY-homologous receiver domain A9Z04_RS03770 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS03795 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A9Z04_RS03825 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS03835 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS03855 SM00387 Histidine kinase-like ATPases A9Z04_RS03860 SM00421 helix_turn_helix, Lux Regulon A9Z04_RS03860 SM00448 cheY-homologous receiver domain A9Z04_RS03865 SM00387 Histidine kinase-like ATPases A9Z04_RS03865 SM00388 His Kinase A (phosphoacceptor) domain A9Z04_RS03865 SM00448 cheY-homologous receiver domain A9Z04_RS03870 SM00091 PAS domain A9Z04_RS03870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9Z04_RS03870 SM00387 Histidine kinase-like ATPases A9Z04_RS03870 SM00388 His Kinase A (phosphoacceptor) domain A9Z04_RS03875 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS03875 SM00448 cheY-homologous receiver domain A9Z04_RS03880 SM00882 Coenzyme A transferase A9Z04_RS03885 SM00882 Coenzyme A transferase A9Z04_RS03910 SM01359 A9Z04_RS03910 A9Z04_RS03910 SM01360 A9Z04_RS03910 A9Z04_RS03925 SM00434 DNA Topoisomerase IV A9Z04_RS03935 SM00869 Autotransporter beta-domain A9Z04_RS04010 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A9Z04_RS04015 SM00346 helix_turn_helix isocitrate lyase regulation A9Z04_RS04020 SM00852 Probable molybdopterin binding domain A9Z04_RS04085 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A9Z04_RS04125 SM00327 von Willebrand factor (vWF) type A domain A9Z04_RS04175 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A9Z04_RS04175 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A9Z04_RS04180 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A9Z04_RS04215 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9Z04_RS04280 SM00905 Dihydroneopterin aldolase A9Z04_RS04295 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS04310 SM00062 Bacterial periplasmic substrate-binding proteins A9Z04_RS04315 SM00062 Bacterial periplasmic substrate-binding proteins A9Z04_RS04360 SM00859 Semialdehyde dehydrogenase, NAD binding domain A9Z04_RS04380 SM00825 Beta-ketoacyl synthase A9Z04_RS04420 SM00463 Small MutS-related domain A9Z04_RS04530 SM00421 helix_turn_helix, Lux Regulon A9Z04_RS04530 SM00448 cheY-homologous receiver domain A9Z04_RS04535 SM00062 Bacterial periplasmic substrate-binding proteins A9Z04_RS04535 SM00073 Histidine Phosphotransfer domain A9Z04_RS04535 SM00387 Histidine kinase-like ATPases A9Z04_RS04535 SM00388 His Kinase A (phosphoacceptor) domain A9Z04_RS04535 SM00448 cheY-homologous receiver domain A9Z04_RS04590 SM00387 Histidine kinase-like ATPases A9Z04_RS04595 SM00448 cheY-homologous receiver domain A9Z04_RS04595 SM00850 LytTr DNA-binding domain A9Z04_RS04600 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS04660 SM00052 Putative diguanylate phosphodiesterase A9Z04_RS04660 SM00267 diguanylate cyclase A9Z04_RS04750 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A9Z04_RS04750 SM00292 breast cancer carboxy-terminal domain A9Z04_RS04750 SM00532 Ligase N family A9Z04_RS04755 SM00771 ZipA, C-terminal domain (FtsZ-binding) A9Z04_RS04800 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS04820 SM00822 A9Z04_RS04820 A9Z04_RS04855 SM00646 A9Z04_RS04855 A9Z04_RS04865 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS04870 SM00877 A9Z04_RS04870 A9Z04_RS04875 SM00877 A9Z04_RS04875 A9Z04_RS04920 SM00877 A9Z04_RS04920 A9Z04_RS04945 SM00877 A9Z04_RS04945 A9Z04_RS04950 SM00919 Malic enzyme, NAD binding domain A9Z04_RS04950 SM01274 A9Z04_RS04950 A9Z04_RS04960 SM00861 Transketolase, pyrimidine binding domain A9Z04_RS04980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9Z04_RS04980 SM00387 Histidine kinase-like ATPases A9Z04_RS05040 SM01130 A9Z04_RS05040 A9Z04_RS05105 SM00052 Putative diguanylate phosphodiesterase A9Z04_RS05105 SM00267 diguanylate cyclase A9Z04_RS05135 SM00116 Domain in cystathionine beta-synthase and other proteins. A9Z04_RS05135 SM01240 A9Z04_RS05135 A9Z04_RS05170 SM00564 beta-propeller repeat A9Z04_RS05190 SM00530 Helix-turn-helix XRE-family like proteins A9Z04_RS05200 SM00562 A9Z04_RS05200 A9Z04_RS05210 SM01359 A9Z04_RS05210 A9Z04_RS05210 SM01360 A9Z04_RS05210 A9Z04_RS05215 SM00450 Rhodanese Homology Domain A9Z04_RS05245 SM00271 DnaJ molecular chaperone homology domain A9Z04_RS05305 SM00829 Enoylreductase A9Z04_RS05315 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS05325 SM00028 Tetratricopeptide repeats A9Z04_RS05345 SM00938 Nitrogen regulatory protein P-II A9Z04_RS05350 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS05350 SM00448 cheY-homologous receiver domain A9Z04_RS05360 SM00387 Histidine kinase-like ATPases A9Z04_RS05360 SM00388 His Kinase A (phosphoacceptor) domain A9Z04_RS05365 SM01211 A9Z04_RS05365 A9Z04_RS05370 SM00062 Bacterial periplasmic substrate-binding proteins A9Z04_RS05425 SM00358 Double-stranded RNA binding motif A9Z04_RS05425 SM00535 Ribonuclease III family A9Z04_RS05475 SM00487 DEAD-like helicases superfamily A9Z04_RS05475 SM00490 helicase superfamily c-terminal domain A9Z04_RS05495 SM00986 Uracil DNA glycosylase superfamily A9Z04_RS05495 SM00987 UreE urease accessory protein, C-terminal domain A9Z04_RS05500 SM00967 RNA 2'-O ribose methyltransferase substrate binding A9Z04_RS05515 SM01144 A9Z04_RS05515 A9Z04_RS05520 SM00881 CoA binding domain A9Z04_RS05525 SM00155 Phospholipase D. Active site motifs. A9Z04_RS05590 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS05590 SM01086 C-terminal, D2-small domain, of ClpB protein A9Z04_RS05600 SM00363 S4 RNA-binding domain A9Z04_RS05620 SM00830 Chorismate mutase type II A9Z04_RS05625 SM00830 Chorismate mutase type II A9Z04_RS05645 SM00267 diguanylate cyclase A9Z04_RS05675 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS05675 SM00962 SRP54-type protein, GTPase domain A9Z04_RS05675 SM00963 SRP54-type protein, helical bundle domain A9Z04_RS05685 SM01091 Transporter associated domain A9Z04_RS05755 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9Z04_RS05755 SM00895 A9Z04_RS05755 A9Z04_RS05760 SM00257 Lysin motif A9Z04_RS05760 SM00749 bacterial OsmY and nodulation domain A9Z04_RS05770 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A9Z04_RS05775 SM00450 Rhodanese Homology Domain A9Z04_RS05780 SM00528 Domain in histone-like proteins of HNS family A9Z04_RS05800 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9Z04_RS05830 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS05860 SM00347 helix_turn_helix multiple antibiotic resistance protein A9Z04_RS05935 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A9Z04_RS05950 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS05990 SM00420 helix_turn_helix, Deoxyribose operon repressor A9Z04_RS05990 SM01134 A9Z04_RS05990 A9Z04_RS06000 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A9Z04_RS06000 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS06005 SM00849 Metallo-beta-lactamase superfamily A9Z04_RS06025 SM00354 helix_turn _helix lactose operon repressor A9Z04_RS06115 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A9Z04_RS06115 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS06130 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A9Z04_RS06130 SM00534 ATPase domain of DNA mismatch repair MUTS family A9Z04_RS06140 SM00420 helix_turn_helix, Deoxyribose operon repressor A9Z04_RS06140 SM01134 A9Z04_RS06140 A9Z04_RS06155 SM01007 Class II Aldolase and Adducin N-terminal domain A9Z04_RS06170 SM00849 Metallo-beta-lactamase superfamily A9Z04_RS06185 SM00257 Lysin motif A9Z04_RS06290 SM00893 Electron transfer flavoprotein domain A9Z04_RS06335 SM00640 Glycosyl hydrolases family 32 A9Z04_RS06340 SM00354 helix_turn _helix lactose operon repressor A9Z04_RS06360 SM01192 A9Z04_RS06360 A9Z04_RS06360 SM01193 A9Z04_RS06360 A9Z04_RS06380 SM00966 SpoVT / AbrB like domain A9Z04_RS06385 SM00954 Region found in RelA / SpoT proteins A9Z04_RS06395 SM00073 Histidine Phosphotransfer domain A9Z04_RS06395 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9Z04_RS06395 SM00387 Histidine kinase-like ATPases A9Z04_RS06395 SM00388 His Kinase A (phosphoacceptor) domain A9Z04_RS06395 SM00448 cheY-homologous receiver domain A9Z04_RS06400 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A9Z04_RS06405 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A9Z04_RS06460 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A9Z04_RS06460 SM00475 5'-3' exonuclease A9Z04_RS06470 SM01007 Class II Aldolase and Adducin N-terminal domain A9Z04_RS06495 SM00420 helix_turn_helix, Deoxyribose operon repressor A9Z04_RS06495 SM01134 A9Z04_RS06495 A9Z04_RS06535 SM00925 MltA specific insert domain A9Z04_RS06585 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS06585 SM01086 C-terminal, D2-small domain, of ClpB protein A9Z04_RS06680 SM01061 CAT RNA binding domain A9Z04_RS06685 SM00646 A9Z04_RS06685 A9Z04_RS06695 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS06745 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A9Z04_RS06765 SM00927 DNA mismatch repair enzyme MutH A9Z04_RS06790 SM00563 Phosphate acyltransferases A9Z04_RS06795 SM00354 helix_turn _helix lactose operon repressor A9Z04_RS06900 SM00857 Resolvase, N terminal domain A9Z04_RS06915 SM00257 Lysin motif A9Z04_RS06920 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A9Z04_RS06925 SM01092 CO dehydrogenase flavoprotein C-terminal domain A9Z04_RS06935 SM00091 PAS domain A9Z04_RS06935 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS06990 SM01092 CO dehydrogenase flavoprotein C-terminal domain A9Z04_RS06995 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A9Z04_RS07050 SM00937 A9Z04_RS07050 A9Z04_RS07095 SM01022 A9Z04_RS07095 A9Z04_RS07130 SM01011 Aminopeptidase P, N-terminal domain A9Z04_RS07210 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A9Z04_RS07230 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS07235 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS07270 SM00244 prohibitin homologues A9Z04_RS07275 SM00861 Transketolase, pyrimidine binding domain A9Z04_RS07325 SM00731 SprT homologues. A9Z04_RS07350 SM00732 Likely ribonuclease with RNase H fold. A9Z04_RS07355 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS07370 SM01152 A9Z04_RS07370 A9Z04_RS07380 SM00729 Elongator protein 3, MiaB family, Radical SAM A9Z04_RS07390 SM00870 A9Z04_RS07390 A9Z04_RS07415 SM00478 endonuclease III A9Z04_RS07415 SM00525 A9Z04_RS07415 A9Z04_RS07470 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS07525 SM00421 helix_turn_helix, Lux Regulon A9Z04_RS07545 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS07560 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS07585 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS07605 SM00448 cheY-homologous receiver domain A9Z04_RS07610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9Z04_RS07610 SM00387 Histidine kinase-like ATPases A9Z04_RS07610 SM00388 His Kinase A (phosphoacceptor) domain A9Z04_RS07705 SM00710 Parallel beta-helix repeats A9Z04_RS07705 SM00912 haemagglutination activity domain A9Z04_RS07730 SM00563 Phosphate acyltransferases A9Z04_RS07785 SM00825 Beta-ketoacyl synthase A9Z04_RS07800 SM00825 Beta-ketoacyl synthase A9Z04_RS07805 SM00354 helix_turn _helix lactose operon repressor A9Z04_RS07845 SM00420 helix_turn_helix, Deoxyribose operon repressor A9Z04_RS07845 SM01134 A9Z04_RS07845 A9Z04_RS07915 SM00869 Autotransporter beta-domain A9Z04_RS08040 SM00858 A9Z04_RS08040 A9Z04_RS08050 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS08100 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS08125 SM01276 A9Z04_RS08125 A9Z04_RS08165 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9Z04_RS08165 SM00895 A9Z04_RS08165 A9Z04_RS08345 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS08375 SM00729 Elongator protein 3, MiaB family, Radical SAM A9Z04_RS08380 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9Z04_RS08380 SM00895 A9Z04_RS08380 A9Z04_RS08420 SM00563 Phosphate acyltransferases A9Z04_RS08425 SM00434 DNA Topoisomerase IV A9Z04_RS08435 SM00871 Bacterial transcription activator, effector binding domain A9Z04_RS08445 SM00448 cheY-homologous receiver domain A9Z04_RS08445 SM00862 Transcriptional regulatory protein, C terminal A9Z04_RS08450 SM00387 Histidine kinase-like ATPases A9Z04_RS08450 SM00388 His Kinase A (phosphoacceptor) domain A9Z04_RS08500 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS08510 SM00387 Histidine kinase-like ATPases A9Z04_RS08510 SM00433 TopoisomeraseII A9Z04_RS08625 SM00244 prohibitin homologues A9Z04_RS08645 SM01118 A9Z04_RS08645 A9Z04_RS08655 SM00287 Bacterial SH3 domain homologues A9Z04_RS08670 SM00905 Dihydroneopterin aldolase A9Z04_RS08675 SM01207 A9Z04_RS08675 A9Z04_RS08710 SM00400 zinc finger A9Z04_RS08710 SM00493 A9Z04_RS08710 A9Z04_RS08710 SM00766 DNA primase DnaG DnaB-binding A9Z04_RS08740 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A9Z04_RS08740 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9Z04_RS08755 SM00354 helix_turn _helix lactose operon repressor A9Z04_RS08760 SM01038 Beta galactosidase small chain A9Z04_RS08790 SM00530 Helix-turn-helix XRE-family like proteins A9Z04_RS08835 SM00858 A9Z04_RS08835 A9Z04_RS08850 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9Z04_RS08850 SM00895 A9Z04_RS08850 A9Z04_RS08990 SM00858 A9Z04_RS08990 A9Z04_RS09005 SM00420 helix_turn_helix, Deoxyribose operon repressor A9Z04_RS09005 SM01134 A9Z04_RS09005 A9Z04_RS09090 SM00749 bacterial OsmY and nodulation domain A9Z04_RS09100 SM00859 Semialdehyde dehydrogenase, NAD binding domain A9Z04_RS09115 SM00465 GIY-YIG type nucleases (URI domain) A9Z04_RS09155 SM00487 DEAD-like helicases superfamily A9Z04_RS09155 SM00490 helicase superfamily c-terminal domain A9Z04_RS09160 SM00028 Tetratricopeptide repeats A9Z04_RS09165 SM00316 Ribosomal protein S1-like RNA-binding domain A9Z04_RS09165 SM00322 K homology RNA-binding domain A9Z04_RS09170 SM01387 A9Z04_RS09170 A9Z04_RS09190 SM00316 Ribosomal protein S1-like RNA-binding domain A9Z04_RS09235 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS09245 SM01103 A9Z04_RS09245 A9Z04_RS09320 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS09350 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS09395 SM00073 Histidine Phosphotransfer domain A9Z04_RS09395 SM00091 PAS domain A9Z04_RS09395 SM00387 Histidine kinase-like ATPases A9Z04_RS09395 SM00388 His Kinase A (phosphoacceptor) domain A9Z04_RS09395 SM00448 cheY-homologous receiver domain A9Z04_RS09400 SM00729 Elongator protein 3, MiaB family, Radical SAM A9Z04_RS09435 SM01130 A9Z04_RS09435 A9Z04_RS09440 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9Z04_RS09440 SM00895 A9Z04_RS09440 A9Z04_RS09475 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A9Z04_RS09480 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A9Z04_RS09535 SM00316 Ribosomal protein S1-like RNA-binding domain A9Z04_RS09565 SM00052 Putative diguanylate phosphodiesterase A9Z04_RS09565 SM00267 diguanylate cyclase A9Z04_RS09570 SM00829 Enoylreductase A9Z04_RS09590 SM00878 Biotin carboxylase C-terminal domain A9Z04_RS09610 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS09625 SM00420 helix_turn_helix, Deoxyribose operon repressor A9Z04_RS09625 SM01134 A9Z04_RS09625 A9Z04_RS09700 SM00062 Bacterial periplasmic substrate-binding proteins A9Z04_RS09715 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS09820 SM00422 helix_turn_helix, mercury resistance A9Z04_RS09835 SM00662 RNA polymerases D A9Z04_RS09840 SM00363 S4 RNA-binding domain A9Z04_RS09840 SM01390 A9Z04_RS09840 A9Z04_RS09905 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A9Z04_RS09910 SM01374 A9Z04_RS09910 A9Z04_RS09930 SM00322 K homology RNA-binding domain A9Z04_RS09945 SM01382 A9Z04_RS09945 A9Z04_RS09945 SM01383 A9Z04_RS09945 A9Z04_RS09965 SM01403 A9Z04_RS09965 A9Z04_RS09990 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS10050 SM00495 Chitin-binding domain type 3 A9Z04_RS10060 SM00838 Elongation factor G C-terminus A9Z04_RS10060 SM00889 Elongation factor G, domain IV A9Z04_RS10125 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS10155 SM00100 Cyclic nucleotide-monophosphate binding domain A9Z04_RS10155 SM00419 helix_turn_helix, cAMP Regulatory protein A9Z04_RS10295 SM00965 Secretin and TonB N terminus short domain A9Z04_RS10340 SM00363 S4 RNA-binding domain A9Z04_RS10365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9Z04_RS10365 SM00387 Histidine kinase-like ATPases A9Z04_RS10365 SM00388 His Kinase A (phosphoacceptor) domain A9Z04_RS10370 SM00448 cheY-homologous receiver domain A9Z04_RS10370 SM00862 Transcriptional regulatory protein, C terminal A9Z04_RS10380 SM00316 Ribosomal protein S1-like RNA-binding domain A9Z04_RS10380 SM00732 Likely ribonuclease with RNase H fold. A9Z04_RS10385 SM00899 A9Z04_RS10385 A9Z04_RS10435 SM00421 helix_turn_helix, Lux Regulon A9Z04_RS10450 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS10455 SM00420 helix_turn_helix, Deoxyribose operon repressor A9Z04_RS10455 SM01134 A9Z04_RS10455 A9Z04_RS10465 SM00450 Rhodanese Homology Domain A9Z04_RS10540 SM00642 Alpha-amylase domain A9Z04_RS10545 SM00642 Alpha-amylase domain A9Z04_RS10550 SM00859 Semialdehyde dehydrogenase, NAD binding domain A9Z04_RS10570 SM00354 helix_turn _helix lactose operon repressor A9Z04_RS10625 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS10650 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS10655 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS10700 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS10705 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS10705 SM00962 SRP54-type protein, GTPase domain A9Z04_RS10705 SM00963 SRP54-type protein, helical bundle domain A9Z04_RS10780 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS10785 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS10795 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9Z04_RS10795 SM00866 A9Z04_RS10795 A9Z04_RS10835 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS10915 SM00421 helix_turn_helix, Lux Regulon A9Z04_RS10940 SM00729 Elongator protein 3, MiaB family, Radical SAM A9Z04_RS10960 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS11005 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS11010 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS11020 SM01235 A9Z04_RS11020 A9Z04_RS11030 SM00421 helix_turn_helix, Lux Regulon A9Z04_RS11055 SM00052 Putative diguanylate phosphodiesterase A9Z04_RS11080 SM00052 Putative diguanylate phosphodiesterase A9Z04_RS11080 SM00267 diguanylate cyclase A9Z04_RS11085 SM00028 Tetratricopeptide repeats A9Z04_RS11145 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS11150 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS11230 SM00530 Helix-turn-helix XRE-family like proteins A9Z04_RS11235 SM00357 Cold shock protein domain A9Z04_RS11290 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS11300 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS11305 SM00047 Lysozyme subfamily 2 A9Z04_RS11310 SM00642 Alpha-amylase domain A9Z04_RS11330 SM00346 helix_turn_helix isocitrate lyase regulation A9Z04_RS11370 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A9Z04_RS11380 SM01007 Class II Aldolase and Adducin N-terminal domain A9Z04_RS11465 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9Z04_RS11465 SM00895 A9Z04_RS11465 A9Z04_RS11480 SM00971 Serine acetyltransferase, N-terminal A9Z04_RS11500 SM00450 Rhodanese Homology Domain A9Z04_RS11525 SM00829 Enoylreductase A9Z04_RS11605 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A9Z04_RS11605 SM01232 A9Z04_RS11605 A9Z04_RS11665 SM00532 Ligase N family A9Z04_RS11670 SM00072 Guanylate kinase homologues. A9Z04_RS11675 SM01409 A9Z04_RS11675 A9Z04_RS11680 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9Z04_RS11680 SM00954 Region found in RelA / SpoT proteins A9Z04_RS11690 SM00487 DEAD-like helicases superfamily A9Z04_RS11690 SM00490 helicase superfamily c-terminal domain A9Z04_RS11830 SM00387 Histidine kinase-like ATPases A9Z04_RS11835 SM00421 helix_turn_helix, Lux Regulon A9Z04_RS11835 SM00448 cheY-homologous receiver domain A9Z04_RS11895 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS11935 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A9Z04_RS11950 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9Z04_RS11950 SM00895 A9Z04_RS11950 A9Z04_RS11975 SM00387 Histidine kinase-like ATPases A9Z04_RS11975 SM00433 TopoisomeraseII A9Z04_RS11985 SM00480 DNA polymerase III beta subunit A9Z04_RS11990 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS11990 SM00760 Bacterial dnaA protein helix-turn-helix domain A9Z04_RS12005 SM01234 A9Z04_RS12005 A9Z04_RS12095 SM01061 CAT RNA binding domain A9Z04_RS12105 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS12140 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS12185 SM01228 A9Z04_RS12185 A9Z04_RS12195 SM00344 helix_turn_helix ASNC type A9Z04_RS12205 SM00327 von Willebrand factor (vWF) type A domain A9Z04_RS12210 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS12225 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS12245 SM00354 helix_turn _helix lactose operon repressor A9Z04_RS12255 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9Z04_RS12255 SM00895 A9Z04_RS12255 A9Z04_RS12300 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS12360 SM00487 DEAD-like helicases superfamily A9Z04_RS12360 SM00490 helicase superfamily c-terminal domain A9Z04_RS12375 SM00357 Cold shock protein domain A9Z04_RS12375 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS12375 SM00959 Rho termination factor, N-terminal domain A9Z04_RS12400 SM00984 UDP binding domain A9Z04_RS12515 SM01219 A9Z04_RS12515 A9Z04_RS12605 SM00341 Helicase and RNase D C-terminal A9Z04_RS12605 SM00487 DEAD-like helicases superfamily A9Z04_RS12605 SM00490 helicase superfamily c-terminal domain A9Z04_RS12605 SM00956 A9Z04_RS12605 A9Z04_RS12675 SM00861 Transketolase, pyrimidine binding domain A9Z04_RS12765 SM00346 helix_turn_helix isocitrate lyase regulation A9Z04_RS12810 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A9Z04_RS12910 SM00563 Phosphate acyltransferases A9Z04_RS12920 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A9Z04_RS12920 SM00474 3'-5' exonuclease A9Z04_RS12920 SM00475 5'-3' exonuclease A9Z04_RS12920 SM00482 DNA polymerase A domain A9Z04_RS12935 SM00729 Elongator protein 3, MiaB family, Radical SAM A9Z04_RS12945 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS12945 SM00448 cheY-homologous receiver domain A9Z04_RS12950 SM00091 PAS domain A9Z04_RS12950 SM00387 Histidine kinase-like ATPases A9Z04_RS12950 SM00388 His Kinase A (phosphoacceptor) domain A9Z04_RS12955 SM01230 A9Z04_RS12955 A9Z04_RS12970 SM00420 helix_turn_helix, Deoxyribose operon repressor A9Z04_RS12970 SM01134 A9Z04_RS12970 A9Z04_RS12985 SM01133 A9Z04_RS12985 A9Z04_RS12990 SM00829 Enoylreductase A9Z04_RS13040 SM00530 Helix-turn-helix XRE-family like proteins A9Z04_RS13080 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A9Z04_RS13105 SM01007 Class II Aldolase and Adducin N-terminal domain A9Z04_RS13125 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS13130 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS13160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9Z04_RS13160 SM00387 Histidine kinase-like ATPases A9Z04_RS13160 SM00388 His Kinase A (phosphoacceptor) domain A9Z04_RS13165 SM00448 cheY-homologous receiver domain A9Z04_RS13165 SM00862 Transcriptional regulatory protein, C terminal A9Z04_RS13255 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS13255 SM01086 C-terminal, D2-small domain, of ClpB protein A9Z04_RS13270 SM00354 helix_turn _helix lactose operon repressor A9Z04_RS13275 SM00487 DEAD-like helicases superfamily A9Z04_RS13275 SM00490 helicase superfamily c-terminal domain A9Z04_RS13395 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS13415 SM00859 Semialdehyde dehydrogenase, NAD binding domain A9Z04_RS13430 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A9Z04_RS13555 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A9Z04_RS13555 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A9Z04_RS13560 SM00649 Ribosomal protein L11/L12 A9Z04_RS13585 SM00663 RNA polymerase I subunit A N-terminus A9Z04_RS13590 SM00876 Biotin and Thiamin Synthesis associated domain A9Z04_RS13645 SM00411 bacterial (prokaryotic) histone like domain A9Z04_RS13660 SM00387 Histidine kinase-like ATPases A9Z04_RS13660 SM00388 His Kinase A (phosphoacceptor) domain A9Z04_RS13665 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS13665 SM00448 cheY-homologous receiver domain A9Z04_RS13670 SM01209 A9Z04_RS13670 A9Z04_RS13670 SM01210 A9Z04_RS13670 A9Z04_RS13675 SM00798 AICARFT/IMPCHase bienzyme A9Z04_RS13675 SM00851 MGS-like domain A9Z04_RS13740 SM00346 helix_turn_helix isocitrate lyase regulation A9Z04_RS13745 SM01018 B12 binding domain A9Z04_RS13800 SM00822 A9Z04_RS13800 A9Z04_RS13810 SM00363 S4 RNA-binding domain A9Z04_RS13885 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS13910 SM00563 Phosphate acyltransferases A9Z04_RS13950 SM00829 Enoylreductase A9Z04_RS13955 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS13960 SM01005 Alanine racemase, C-terminal domain A9Z04_RS13970 SM00861 Transketolase, pyrimidine binding domain A9Z04_RS13990 SM00881 CoA binding domain A9Z04_RS14005 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS14005 SM00448 cheY-homologous receiver domain A9Z04_RS14010 SM00387 Histidine kinase-like ATPases A9Z04_RS14045 SM00052 Putative diguanylate phosphodiesterase A9Z04_RS14050 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS14055 SM00422 helix_turn_helix, mercury resistance A9Z04_RS14130 SM00028 Tetratricopeptide repeats A9Z04_RS14140 SM00671 Sel1-like repeats. A9Z04_RS14145 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS14150 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS14175 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A9Z04_RS14205 SM00849 Metallo-beta-lactamase superfamily A9Z04_RS14225 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS14260 SM00072 Guanylate kinase homologues. A9Z04_RS14270 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS14275 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS14300 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9Z04_RS14300 SM00866 A9Z04_RS14300 A9Z04_RS14315 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS14350 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9Z04_RS14350 SM00387 Histidine kinase-like ATPases A9Z04_RS14350 SM00388 His Kinase A (phosphoacceptor) domain A9Z04_RS14355 SM00448 cheY-homologous receiver domain A9Z04_RS14355 SM00862 Transcriptional regulatory protein, C terminal A9Z04_RS14370 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS14380 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS14415 SM00448 cheY-homologous receiver domain A9Z04_RS14420 SM00091 PAS domain A9Z04_RS14420 SM00387 Histidine kinase-like ATPases A9Z04_RS14465 SM00862 Transcriptional regulatory protein, C terminal A9Z04_RS14540 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A9Z04_RS14540 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A9Z04_RS14540 SM00493 A9Z04_RS14540 A9Z04_RS14835 SM00634 Bacterial Ig-like domain (group 1) A9Z04_RS14895 SM00883 Chaperonin 10 Kd subunit A9Z04_RS14920 SM00841 Elongation factor P, C-terminal A9Z04_RS14920 SM01185 A9Z04_RS14920 A9Z04_RS14995 SM00479 A9Z04_RS14995 A9Z04_RS15030 SM00646 A9Z04_RS15030 A9Z04_RS15035 SM00853 MutL C terminal dimerisation domain A9Z04_RS15035 SM01340 A9Z04_RS15035 A9Z04_RS15055 SM00244 prohibitin homologues A9Z04_RS15060 SM00244 prohibitin homologues A9Z04_RS15070 SM00788 Adenylosuccinate synthetase A9Z04_RS15080 SM00316 Ribosomal protein S1-like RNA-binding domain A9Z04_RS15080 SM00357 Cold shock protein domain A9Z04_RS15080 SM00955 A9Z04_RS15080 A9Z04_RS15085 SM00967 RNA 2'-O ribose methyltransferase substrate binding A9Z04_RS15140 SM00420 helix_turn_helix, Deoxyribose operon repressor A9Z04_RS15140 SM01134 A9Z04_RS15140 A9Z04_RS15165 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A9Z04_RS15175 SM01007 Class II Aldolase and Adducin N-terminal domain A9Z04_RS15210 SM00530 Helix-turn-helix XRE-family like proteins A9Z04_RS15230 SM00882 Coenzyme A transferase A9Z04_RS15310 SM01091 Transporter associated domain A9Z04_RS15340 SM00671 Sel1-like repeats. A9Z04_RS15355 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS15410 SM00642 Alpha-amylase domain A9Z04_RS15420 SM00354 helix_turn _helix lactose operon repressor A9Z04_RS15425 SM00831 Cation transporter/ATPase, N-terminus A9Z04_RS15530 SM00829 Enoylreductase A9Z04_RS15540 SM00487 DEAD-like helicases superfamily A9Z04_RS15570 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS15680 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9Z04_RS15680 SM00895 A9Z04_RS15680 A9Z04_RS15700 SM01120 A9Z04_RS15700 A9Z04_RS15830 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9Z04_RS15845 SM00487 DEAD-like helicases superfamily A9Z04_RS15875 SM00833 Cobalamin synthesis protein cobW C-terminal domain A9Z04_RS15895 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9Z04_RS15895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9Z04_RS15895 SM00319 Homologues of the ligand binding domain of Tar A9Z04_RS15920 SM00895 A9Z04_RS15920 A9Z04_RS15925 SM00829 Enoylreductase A9Z04_RS15940 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS15960 SM00421 helix_turn_helix, Lux Regulon A9Z04_RS15965 SM00421 helix_turn_helix, Lux Regulon A9Z04_RS16025 SM00749 bacterial OsmY and nodulation domain A9Z04_RS16060 SM01133 A9Z04_RS16060 A9Z04_RS16065 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain A9Z04_RS16100 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS16105 SM00530 Helix-turn-helix XRE-family like proteins A9Z04_RS16115 SM00530 Helix-turn-helix XRE-family like proteins A9Z04_RS16120 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS16140 SM00855 Phosphoglycerate mutase family A9Z04_RS16145 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS16145 SM00871 Bacterial transcription activator, effector binding domain A9Z04_RS16155 SM00448 cheY-homologous receiver domain A9Z04_RS16155 SM00862 Transcriptional regulatory protein, C terminal A9Z04_RS16160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9Z04_RS16160 SM00387 Histidine kinase-like ATPases A9Z04_RS16160 SM00388 His Kinase A (phosphoacceptor) domain A9Z04_RS16170 SM00448 cheY-homologous receiver domain A9Z04_RS16170 SM00862 Transcriptional regulatory protein, C terminal A9Z04_RS16230 SM00852 Probable molybdopterin binding domain A9Z04_RS16260 SM00271 DnaJ molecular chaperone homology domain A9Z04_RS16305 SM00904 Riboflavin kinase A9Z04_RS16355 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A9Z04_RS16360 SM00851 MGS-like domain A9Z04_RS16360 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A9Z04_RS16405 SM00893 Electron transfer flavoprotein domain A9Z04_RS16410 SM00893 Electron transfer flavoprotein domain A9Z04_RS16465 SM00650 Ribosomal RNA adenine dimethylases A9Z04_RS16485 SM00271 DnaJ molecular chaperone homology domain A9Z04_RS16495 SM00487 DEAD-like helicases superfamily A9Z04_RS16495 SM00490 helicase superfamily c-terminal domain A9Z04_RS16500 SM00486 DNA polymerase type-B family A9Z04_RS16505 SM01007 Class II Aldolase and Adducin N-terminal domain A9Z04_RS16520 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS16540 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS16575 SM01329 A9Z04_RS16575 A9Z04_RS16580 SM00917 LeuA allosteric (dimerisation) domain A9Z04_RS16610 SM00354 helix_turn _helix lactose operon repressor A9Z04_RS16680 SM00842 Cell division protein FtsA A9Z04_RS16685 SM00864 Tubulin/FtsZ family, GTPase domain A9Z04_RS16685 SM00865 Tubulin/FtsZ family, C-terminal domain A9Z04_RS16700 SM00957 SecA DEAD-like domain A9Z04_RS16700 SM00958 SecA preprotein cross-linking domain A9Z04_RS16725 SM01240 A9Z04_RS16725 A9Z04_RS16755 SM00644 A9Z04_RS16755 A9Z04_RS16800 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9Z04_RS16800 SM00895 A9Z04_RS16800 A9Z04_RS16860 SM00564 beta-propeller repeat A9Z04_RS16870 SM00947 Carbonic anhydrase A9Z04_RS16875 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS16980 SM00487 DEAD-like helicases superfamily A9Z04_RS16980 SM00490 helicase superfamily c-terminal domain A9Z04_RS16980 SM00847 Helicase associated domain (HA2) Add an annotation A9Z04_RS16995 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS17040 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9Z04_RS17045 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A9Z04_RS17065 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A9Z04_RS17110 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A9Z04_RS17120 SM00935 Outer membrane protein (OmpH-like) A9Z04_RS17150 SM00481 DNA polymerase alpha chain like domain A9Z04_RS17170 SM00977 TilS substrate C-terminal domain A9Z04_RS17185 SM01322 A9Z04_RS17185 A9Z04_RS17230 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS17230 SM00930 A9Z04_RS17230 A9Z04_RS17290 SM00257 Lysin motif A9Z04_RS17295 SM00849 Metallo-beta-lactamase superfamily A9Z04_RS17310 SM00479 A9Z04_RS17310 A9Z04_RS17350 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS17350 SM01086 C-terminal, D2-small domain, of ClpB protein A9Z04_RS17495 SM01321 A9Z04_RS17495 A9Z04_RS17535 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS17560 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS17605 SM00858 A9Z04_RS17605 A9Z04_RS17670 SM00862 Transcriptional regulatory protein, C terminal A9Z04_RS17730 SM00857 Resolvase, N terminal domain A9Z04_RS17740 SM00857 Resolvase, N terminal domain A9Z04_RS17800 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A9Z04_RS17875 SM00778 Zinc-binding domain of primase-helicase A9Z04_RS17945 SM00347 helix_turn_helix multiple antibiotic resistance protein A9Z04_RS17950 SM00869 Autotransporter beta-domain A9Z04_RS18005 SM00421 helix_turn_helix, Lux Regulon A9Z04_RS18055 SM00634 Bacterial Ig-like domain (group 1) A9Z04_RS18060 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS18060 SM00871 Bacterial transcription activator, effector binding domain A9Z04_RS18085 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS18115 SM00869 Autotransporter beta-domain A9Z04_RS18125 SM00421 helix_turn_helix, Lux Regulon A9Z04_RS18165 SM00052 Putative diguanylate phosphodiesterase A9Z04_RS18165 SM00421 helix_turn_helix, Lux Regulon A9Z04_RS18180 SM00248 ankyrin repeats A9Z04_RS18215 SM00829 Enoylreductase A9Z04_RS18235 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS18270 SM01266 A9Z04_RS18270 A9Z04_RS18280 SM01038 Beta galactosidase small chain A9Z04_RS18300 SM00829 Enoylreductase A9Z04_RS18330 SM00062 Bacterial periplasmic substrate-binding proteins A9Z04_RS18335 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS18350 SM01004 Delta-aminolevulinic acid dehydratase A9Z04_RS18355 SM00869 Autotransporter beta-domain A9Z04_RS18405 SM00098 Alkaline phosphatase homologues A9Z04_RS18415 SM00267 diguanylate cyclase A9Z04_RS18490 SM00448 cheY-homologous receiver domain A9Z04_RS18490 SM00862 Transcriptional regulatory protein, C terminal A9Z04_RS18495 SM00091 PAS domain A9Z04_RS18495 SM00387 Histidine kinase-like ATPases A9Z04_RS18495 SM00388 His Kinase A (phosphoacceptor) domain A9Z04_RS18510 SM00642 Alpha-amylase domain A9Z04_RS18530 SM01323 A9Z04_RS18530 A9Z04_RS18545 SM00507 HNH nucleases A9Z04_RS18595 SM00861 Transketolase, pyrimidine binding domain A9Z04_RS18610 SM00981 A9Z04_RS18610 A9Z04_RS18690 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS18690 SM00994 ClpX C4-type zinc finger A9Z04_RS18690 SM01086 C-terminal, D2-small domain, of ClpB protein A9Z04_RS18695 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS18695 SM00464 Found in ATP-dependent protease La (LON) A9Z04_RS18700 SM00411 bacterial (prokaryotic) histone like domain A9Z04_RS18710 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A9Z04_RS18735 SM00344 helix_turn_helix ASNC type A9Z04_RS18740 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS18745 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS18750 SM00938 Nitrogen regulatory protein P-II A9Z04_RS18785 SM00052 Putative diguanylate phosphodiesterase A9Z04_RS18795 SM01266 A9Z04_RS18795 A9Z04_RS18855 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS18865 SM00493 A9Z04_RS18865 A9Z04_RS18870 SM00387 Histidine kinase-like ATPases A9Z04_RS18930 SM00530 Helix-turn-helix XRE-family like proteins A9Z04_RS18950 SM00422 helix_turn_helix, mercury resistance A9Z04_RS18970 SM00244 prohibitin homologues A9Z04_RS18975 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS18990 SM00822 A9Z04_RS18990 A9Z04_RS19000 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS19010 SM00450 Rhodanese Homology Domain A9Z04_RS19025 SM00346 helix_turn_helix isocitrate lyase regulation A9Z04_RS19105 SM01001 AIR carboxylase A9Z04_RS19125 SM00840 A9Z04_RS19125 A9Z04_RS19180 SM00028 Tetratricopeptide repeats A9Z04_RS19190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9Z04_RS19190 SM00387 Histidine kinase-like ATPases A9Z04_RS19190 SM00388 His Kinase A (phosphoacceptor) domain A9Z04_RS19195 SM00448 cheY-homologous receiver domain A9Z04_RS19195 SM00862 Transcriptional regulatory protein, C terminal A9Z04_RS19280 SM00923 MbtH-like protein A9Z04_RS19285 SM00823 Phosphopantetheine attachment site A9Z04_RS19285 SM00824 Thioesterase A9Z04_RS19295 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS19335 SM00822 A9Z04_RS19335 A9Z04_RS19365 SM00470 ParB-like nuclease domain A9Z04_RS19440 SM00764 Citrate lyase ligase C-terminal domain A9Z04_RS19445 SM00091 PAS domain A9Z04_RS19445 SM00387 Histidine kinase-like ATPases A9Z04_RS19450 SM00448 cheY-homologous receiver domain A9Z04_RS19465 SM00357 Cold shock protein domain A9Z04_RS19485 SM00729 Elongator protein 3, MiaB family, Radical SAM A9Z04_RS19510 SM00936 Penicillin-binding protein 5, C-terminal domain A9Z04_RS19540 SM00855 Phosphoglycerate mutase family A9Z04_RS19575 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS19590 SM00062 Bacterial periplasmic substrate-binding proteins A9Z04_RS19605 SM00116 Domain in cystathionine beta-synthase and other proteins. A9Z04_RS19605 SM01091 Transporter associated domain A9Z04_RS19620 SM00729 Elongator protein 3, MiaB family, Radical SAM A9Z04_RS19715 SM01130 A9Z04_RS19715 A9Z04_RS19735 SM00420 helix_turn_helix, Deoxyribose operon repressor A9Z04_RS19735 SM01134 A9Z04_RS19735 A9Z04_RS19810 SM00448 cheY-homologous receiver domain A9Z04_RS19810 SM00862 Transcriptional regulatory protein, C terminal A9Z04_RS19815 SM00387 Histidine kinase-like ATPases A9Z04_RS19815 SM00388 His Kinase A (phosphoacceptor) domain A9Z04_RS19865 SM00796 Allophanate hydrolase subunit 1 A9Z04_RS19870 SM00797 Allophanate hydrolase subunit 2 A9Z04_RS19880 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A9Z04_RS19880 SM01232 A9Z04_RS19880 A9Z04_RS19930 SM00861 Transketolase, pyrimidine binding domain A9Z04_RS19945 SM00881 CoA binding domain A9Z04_RS19950 SM00028 Tetratricopeptide repeats A9Z04_RS20075 SM00855 Phosphoglycerate mutase family A9Z04_RS20100 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS20130 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS20185 SM00729 Elongator protein 3, MiaB family, Radical SAM A9Z04_RS20185 SM00876 Biotin and Thiamin Synthesis associated domain A9Z04_RS20205 SM00487 DEAD-like helicases superfamily A9Z04_RS20205 SM00490 helicase superfamily c-terminal domain A9Z04_RS20215 SM00729 Elongator protein 3, MiaB family, Radical SAM A9Z04_RS20220 SM00852 Probable molybdopterin binding domain A9Z04_RS20255 SM00155 Phospholipase D. Active site motifs. A9Z04_RS20280 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS20295 SM00487 DEAD-like helicases superfamily A9Z04_RS20295 SM00490 helicase superfamily c-terminal domain A9Z04_RS20305 SM00487 DEAD-like helicases superfamily A9Z04_RS20305 SM00488 A9Z04_RS20305 A9Z04_RS20305 SM00491 A9Z04_RS20305 A9Z04_RS20330 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. A9Z04_RS20360 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS20370 SM00062 Bacterial periplasmic substrate-binding proteins A9Z04_RS20370 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A9Z04_RS20405 SM00529 Helix-turn-helix diphteria tox regulatory element A9Z04_RS20420 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS20450 SM00852 Probable molybdopterin binding domain A9Z04_RS20460 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS20480 SM00052 Putative diguanylate phosphodiesterase A9Z04_RS20485 SM00267 diguanylate cyclase A9Z04_RS20490 SM00729 Elongator protein 3, MiaB family, Radical SAM A9Z04_RS20510 SM00936 Penicillin-binding protein 5, C-terminal domain A9Z04_RS20515 SM00420 helix_turn_helix, Deoxyribose operon repressor A9Z04_RS20515 SM01134 A9Z04_RS20515 A9Z04_RS20520 SM00014 Acid phosphatase homologues A9Z04_RS20810 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS20835 SM00062 Bacterial periplasmic substrate-binding proteins A9Z04_RS20835 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A9Z04_RS20850 SM00062 Bacterial periplasmic substrate-binding proteins A9Z04_RS20850 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A9Z04_RS20855 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS20870 SM00644 A9Z04_RS20870 A9Z04_RS20935 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS20940 SM00357 Cold shock protein domain A9Z04_RS20950 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS20950 SM01086 C-terminal, D2-small domain, of ClpB protein A9Z04_RS20990 SM00316 Ribosomal protein S1-like RNA-binding domain A9Z04_RS21000 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS21005 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS21015 SM00344 helix_turn_helix ASNC type A9Z04_RS21020 SM00843 A9Z04_RS21020 A9Z04_RS21030 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS21040 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A9Z04_RS21110 SM00316 Ribosomal protein S1-like RNA-binding domain A9Z04_RS21115 SM00411 bacterial (prokaryotic) histone like domain A9Z04_RS21120 SM00849 Metallo-beta-lactamase superfamily A9Z04_RS21125 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS21190 SM00849 Metallo-beta-lactamase superfamily A9Z04_RS21225 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS21240 SM00062 Bacterial periplasmic substrate-binding proteins A9Z04_RS21265 SM00981 A9Z04_RS21265 A9Z04_RS21270 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS21345 SM00851 MGS-like domain A9Z04_RS21360 SM00881 CoA binding domain A9Z04_RS21365 SM00992 Hemimethylated DNA-binding protein YccV like A9Z04_RS21370 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A9Z04_RS21445 SM00357 Cold shock protein domain A9Z04_RS21450 SM00357 Cold shock protein domain A9Z04_RS21470 SM00073 Histidine Phosphotransfer domain A9Z04_RS21470 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9Z04_RS21470 SM00387 Histidine kinase-like ATPases A9Z04_RS21470 SM00388 His Kinase A (phosphoacceptor) domain A9Z04_RS21470 SM00448 cheY-homologous receiver domain A9Z04_RS21480 SM00448 cheY-homologous receiver domain A9Z04_RS21480 SM00862 Transcriptional regulatory protein, C terminal A9Z04_RS21505 SM00271 DnaJ molecular chaperone homology domain A9Z04_RS21540 SM00903 Flavin reductase like domain A9Z04_RS21630 SM00028 Tetratricopeptide repeats A9Z04_RS21635 SM00267 diguanylate cyclase A9Z04_RS21700 SM00420 helix_turn_helix, Deoxyribose operon repressor A9Z04_RS21780 SM00052 Putative diguanylate phosphodiesterase A9Z04_RS21785 SM00347 helix_turn_helix multiple antibiotic resistance protein A9Z04_RS21805 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS21845 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS21860 SM00833 Cobalamin synthesis protein cobW C-terminal domain A9Z04_RS21870 SM00671 Sel1-like repeats. A9Z04_RS21900 SM00869 Autotransporter beta-domain A9Z04_RS21970 SM00481 DNA polymerase alpha chain like domain A9Z04_RS22000 SM00421 helix_turn_helix, Lux Regulon A9Z04_RS22030 SM00506 Appr-1"-p processing enzyme A9Z04_RS22035 SM00155 Phospholipase D. Active site motifs. A9Z04_RS22090 SM00450 Rhodanese Homology Domain A9Z04_RS22095 SM00867 YceI-like domain A9Z04_RS22175 SM00858 A9Z04_RS22175 A9Z04_RS22220 SM00047 Lysozyme subfamily 2 A9Z04_RS22235 SM00316 Ribosomal protein S1-like RNA-binding domain A9Z04_RS22245 SM00363 S4 RNA-binding domain A9Z04_RS22275 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A9Z04_RS22280 SM00822 A9Z04_RS22280 A9Z04_RS22290 SM00825 Beta-ketoacyl synthase A9Z04_RS22380 SM00257 Lysin motif A9Z04_RS22385 SM00487 DEAD-like helicases superfamily A9Z04_RS22385 SM00490 helicase superfamily c-terminal domain A9Z04_RS22385 SM00982 A9Z04_RS22385 A9Z04_RS22385 SM01058 CarD-like/TRCF domain A9Z04_RS22400 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS22445 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS22460 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. A9Z04_RS22465 SM00387 Histidine kinase-like ATPases A9Z04_RS22470 SM00448 cheY-homologous receiver domain A9Z04_RS22470 SM00862 Transcriptional regulatory protein, C terminal A9Z04_RS22500 SM01329 A9Z04_RS22500 A9Z04_RS22570 SM00530 Helix-turn-helix XRE-family like proteins A9Z04_RS22750 SM00635 Bacterial Ig-like domain 2 A9Z04_RS22780 SM00232 JAB/MPN domain A9Z04_RS22830 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS22865 SM00422 helix_turn_helix, mercury resistance A9Z04_RS22870 SM00052 Putative diguanylate phosphodiesterase A9Z04_RS22870 SM01034 Sensors of blue-light using FAD A9Z04_RS22895 SM00052 Putative diguanylate phosphodiesterase A9Z04_RS23005 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9Z04_RS23020 SM01005 Alanine racemase, C-terminal domain A9Z04_RS23025 SM01091 Transporter associated domain A9Z04_RS23065 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS23090 SM01120 A9Z04_RS23090 A9Z04_RS23100 SM00091 PAS domain A9Z04_RS23100 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS23130 SM01400 A9Z04_RS23130 A9Z04_RS23150 SM00937 A9Z04_RS23150 A9Z04_RS23205 SM00421 helix_turn_helix, Lux Regulon A9Z04_RS23205 SM00448 cheY-homologous receiver domain A9Z04_RS23210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A9Z04_RS23210 SM00387 Histidine kinase-like ATPases A9Z04_RS23225 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A9Z04_RS23280 SM00448 cheY-homologous receiver domain A9Z04_RS23290 SM00528 Domain in histone-like proteins of HNS family A9Z04_RS23330 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS23335 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS23345 SM00155 Phospholipase D. Active site motifs. A9Z04_RS23430 SM00481 DNA polymerase alpha chain like domain A9Z04_RS23445 SM00363 S4 RNA-binding domain A9Z04_RS23455 SM00822 A9Z04_RS23455 A9Z04_RS23480 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A9Z04_RS23480 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A9Z04_RS23480 SM00493 A9Z04_RS23480 A9Z04_RS23515 SM00014 Acid phosphatase homologues A9Z04_RS23525 SM00028 Tetratricopeptide repeats A9Z04_RS23530 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A9Z04_RS23545 SM00420 helix_turn_helix, Deoxyribose operon repressor A9Z04_RS23545 SM01134 A9Z04_RS23545 A9Z04_RS23555 SM00052 Putative diguanylate phosphodiesterase A9Z04_RS23555 SM00091 PAS domain A9Z04_RS23555 SM00267 diguanylate cyclase A9Z04_RS23565 SM00357 Cold shock protein domain A9Z04_RS23565 SM00955 A9Z04_RS23565 A9Z04_RS23605 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS23610 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS23640 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS23665 SM00450 Rhodanese Homology Domain A9Z04_RS23670 SM00642 Alpha-amylase domain A9Z04_RS23715 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS23725 SM00354 helix_turn _helix lactose operon repressor A9Z04_RS23740 SM00091 PAS domain A9Z04_RS23740 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS23750 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A9Z04_RS23800 SM00100 Cyclic nucleotide-monophosphate binding domain A9Z04_RS23800 SM00419 helix_turn_helix, cAMP Regulatory protein A9Z04_RS23820 SM00342 helix_turn_helix, arabinose operon control protein A9Z04_RS23835 SM00463 Small MutS-related domain A9Z04_RS23840 SM00091 PAS domain A9Z04_RS23840 SM00267 diguanylate cyclase A9Z04_RS23855 SM00487 DEAD-like helicases superfamily A9Z04_RS23855 SM00490 helicase superfamily c-terminal domain A9Z04_RS23885 SM00890 Domain of unknown function A9Z04_RS23935 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS23935 SM00487 DEAD-like helicases superfamily A9Z04_RS23935 SM00490 helicase superfamily c-terminal domain A9Z04_RS23935 SM00847 Helicase associated domain (HA2) Add an annotation A9Z04_RS23950 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A9Z04_RS23965 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A9Z04_RS23975 SM01150 A9Z04_RS23975 A9Z04_RS24025 SM00530 Helix-turn-helix XRE-family like proteins A9Z04_RS24040 SM00530 Helix-turn-helix XRE-family like proteins A9Z04_RS24045 SM00345 helix_turn_helix gluconate operon transcriptional repressor A9Z04_RS24055 SM00382 ATPases associated with a variety of cellular activities A9Z04_RS24180 SM01351 A9Z04_RS24180 A9Z04_RS24205 SM00903 Flavin reductase like domain A9Z04_RS24235 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A9Z04_RS24250 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A9Z04_RS24270 SM00530 Helix-turn-helix XRE-family like proteins A9Z04_RS24280 SM00829 Enoylreductase A9Z04_RS24285 SM00919 Malic enzyme, NAD binding domain A9Z04_RS24285 SM01274 A9Z04_RS24285 A9Z04_RS24305 SM00052 Putative diguanylate phosphodiesterase A9Z04_RS24305 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A9Z04_RS24305 SM00091 PAS domain A9Z04_RS24305 SM00267 diguanylate cyclase A9Z04_RS24360 SM00342 helix_turn_helix, arabinose operon control protein