locus-tag class description COG34_RS00010 PF01488 Shikimate / quinate 5-dehydrogenase COG34_RS00010 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain COG34_RS00010 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain COG34_RS00015 PF03550 Outer membrane lipoprotein LolB COG34_RS00020 PF08544 GHMP kinases C terminal COG34_RS00020 PF00288 GHMP kinases N terminal domain COG34_RS00030 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase COG34_RS00030 PF14572 Phosphoribosyl synthetase-associated domain COG34_RS00040 PF01740 STAS domain COG34_RS00040 PF00916 Sulfate permease family COG34_RS00045 PF10762 Protein of unknown function (DUF2583) COG34_RS00050 PF01195 Peptidyl-tRNA hydrolase COG34_RS00055 PF06071 Protein of unknown function (DUF933) COG34_RS00055 PF01926 50S ribosome-binding GTPase COG34_RS00070 PF03212 Pertactin COG34_RS00070 PF03797 Autotransporter beta-domain COG34_RS00075 PF00989 PAS fold COG34_RS00075 PF00158 Sigma-54 interaction domain COG34_RS00075 PF02954 Bacterial regulatory protein, Fis family COG34_RS00080 PF02733 Dak1 domain COG34_RS00085 PF02734 DAK2 domain COG34_RS00090 PF00391 PEP-utilising enzyme, mobile domain COG34_RS00090 PF03610 PTS system fructose IIA component COG34_RS00090 PF00381 PTS HPr component phosphorylation site COG34_RS00090 PF05524 PEP-utilising enzyme, N-terminal COG34_RS00100 PF01204 Trehalase COG34_RS00110 PF04226 Transglycosylase associated protein COG34_RS00115 PF07238 PilZ domain COG34_RS00115 PF07317 Flagellar regulator YcgR COG34_RS00120 PF01464 Transglycosylase SLT domain COG34_RS00130 PF02016 LD-carboxypeptidase N-terminal domain COG34_RS00130 PF17676 LD-carboxypeptidase C-terminal domain COG34_RS00135 PF02080 TrkA-C domain COG34_RS00135 PF00999 Sodium/hydrogen exchanger family COG34_RS00135 PF03471 Transporter associated domain COG34_RS00145 PF00842 Alanine racemase, C-terminal domain COG34_RS00145 PF01168 Alanine racemase, N-terminal domain COG34_RS00150 PF01266 FAD dependent oxidoreductase COG34_RS00155 PF04293 SpoVR like protein COG34_RS00160 PF00392 Bacterial regulatory proteins, gntR family COG34_RS00160 PF07840 FadR C-terminal domain COG34_RS00165 PF06450 Bacterial Na+/H+ antiporter B (NhaB) COG34_RS00170 PF02600 Disulfide bond formation protein DsbB COG34_RS00175 PF11799 impB/mucB/samB family C-terminal domain COG34_RS00175 PF00817 impB/mucB/samB family COG34_RS00175 PF13438 Domain of unknown function (DUF4113) COG34_RS00175 PF11798 IMS family HHH motif COG34_RS00180 PF00717 Peptidase S24-like COG34_RS00185 PF06109 Haemolysin E (HlyE) COG34_RS00190 PF03692 Putative zinc- or iron-chelating domain COG34_RS00195 PF01557 Fumarylacetoacetate (FAA) hydrolase family COG34_RS00200 PF05166 YcgL domain COG34_RS00205 PF04151 Bacterial pre-peptidase C-terminal domain COG34_RS00210 PF05666 Fels-1 Prophage Protein-like COG34_RS00220 PF05209 Septum formation inhibitor MinC, N-terminal domain COG34_RS00220 PF03775 Septum formation inhibitor MinC, C-terminal domain COG34_RS00225 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain COG34_RS00230 PF03776 Septum formation topological specificity factor MinE COG34_RS00240 PF03797 Autotransporter beta-domain COG34_RS00255 PF13436 Glycine-zipper domain COG34_RS00260 PF16456 YmgD protein COG34_RS00265 PF03797 Autotransporter beta-domain COG34_RS00285 PF12792 CSS motif domain associated with EAL COG34_RS00285 PF00563 EAL domain COG34_RS00295 PF10798 Biofilm development protein YmgB/AriR COG34_RS00305 PF10798 Biofilm development protein YmgB/AriR COG34_RS00310 PF00563 EAL domain COG34_RS00310 PF04940 Sensors of blue-light using FAD COG34_RS00315 PF13411 MerR HTH family regulatory protein COG34_RS00320 PF07166 Protein of unknown function (DUF1398) COG34_RS00330 PF00180 Isocitrate/isopropylmalate dehydrogenase COG34_RS00335 PF00849 RNA pseudouridylate synthase COG34_RS00340 PF00293 NUDIX domain COG34_RS00350 PF04356 Protein of unknown function (DUF489) COG34_RS00355 PF00206 Lyase COG34_RS00355 PF08328 Adenylosuccinate lyase C-terminal COG34_RS00360 PF00072 Response regulator receiver domain COG34_RS00360 PF00486 Transcriptional regulatory protein, C terminal COG34_RS00365 PF08918 PhoQ Sensor COG34_RS00365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS00370 PF08007 Cupin superfamily protein COG34_RS00375 PF01546 Peptidase family M20/M25/M40 COG34_RS00375 PF07687 Peptidase dimerisation domain COG34_RS00385 PF08402 TOBE domain COG34_RS00385 PF00005 ABC transporter COG34_RS00390 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS00395 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS00400 PF13416 Bacterial extracellular solute-binding protein COG34_RS00405 PF12158 Protein of unknown function (DUF3592) COG34_RS00410 PF04536 TPM domain COG34_RS00415 PF04536 TPM domain COG34_RS00420 PF02146 Sir2 family COG34_RS00425 PF00480 ROK family COG34_RS00430 PF02687 FtsX-like permease family COG34_RS00430 PF12704 MacB-like periplasmic core domain COG34_RS00435 PF00005 ABC transporter COG34_RS00440 PF02687 FtsX-like permease family COG34_RS00440 PF12704 MacB-like periplasmic core domain COG34_RS00445 PF01757 Acyltransferase family COG34_RS00450 PF17757 UvrB interaction domain COG34_RS00450 PF02559 CarD-like/TRCF domain COG34_RS00450 PF00270 DEAD/DEAH box helicase COG34_RS00450 PF00271 Helicase conserved C-terminal domain COG34_RS00450 PF03461 TRCF domain COG34_RS00455 PF01476 LysM domain COG34_RS00455 PF03734 L,D-transpeptidase catalytic domain COG34_RS00455 PF17969 L,D-transpeptidase C-terminal domain COG34_RS00460 PF07338 Protein of unknown function (DUF1471) COG34_RS00465 PF00440 Bacterial regulatory proteins, tetR family COG34_RS00470 PF05433 Glycine zipper 2TM domain COG34_RS00480 PF07992 Pyridine nucleotide-disulphide oxidoreductase COG34_RS00490 PF05728 Uncharacterised protein family (UPF0227) COG34_RS00495 PF00933 Glycosyl hydrolase family 3 N terminal domain COG34_RS00500 PF01636 Phosphotransferase enzyme family COG34_RS00505 PF13036 Peptidoglycan-synthase activator LpoB COG34_RS00510 PF07233 Protein of unknown function (DUF1425) COG34_RS00515 PF01230 HIT domain COG34_RS00520 PF07715 TonB-dependent Receptor Plug Domain COG34_RS00520 PF00593 TonB dependent receptor COG34_RS00525 PF00367 phosphotransferase system, EIIB COG34_RS00525 PF02378 Phosphotransferase system, EIIC COG34_RS00530 PF01026 TatD related DNase COG34_RS00535 PF09115 DNA polymerase III, delta subunit, C terminal COG34_RS00540 PF02223 Thymidylate kinase COG34_RS00545 PF02618 YceG-like family COG34_RS00550 PF01063 Amino-transferase class IV COG34_RS00555 PF00109 Beta-ketoacyl synthase, N-terminal domain COG34_RS00555 PF02801 Beta-ketoacyl synthase, C-terminal domain COG34_RS00560 PF00550 Phosphopantetheine attachment site COG34_RS00570 PF00698 Acyl transferase domain COG34_RS00575 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal COG34_RS00575 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III COG34_RS00580 PF02504 Fatty acid synthesis protein COG34_RS00585 PF01783 Ribosomal L32p protein family COG34_RS00590 PF02620 Large ribosomal RNA subunit accumulation protein YceD COG34_RS00595 PF02545 Maf-like protein COG34_RS00600 PF01479 S4 domain COG34_RS00600 PF00849 RNA pseudouridylate synthase COG34_RS00610 PF00575 S1 RNA binding domain COG34_RS00610 PF12111 Polyribonucleotide phosphorylase C terminal COG34_RS00610 PF10150 Ribonuclease E/G family COG34_RS00615 PF00669 Bacterial flagellin N-terminal helical region COG34_RS00620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal COG34_RS00620 PF00460 Flagella basal body rod protein COG34_RS00625 PF10135 Rod binding protein COG34_RS00625 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase COG34_RS00630 PF02119 Flagellar P-ring protein COG34_RS00635 PF02107 Flagellar L-ring protein COG34_RS00640 PF06429 Flagellar basal body rod FlgEFG protein C-terminal COG34_RS00640 PF00460 Flagella basal body rod protein COG34_RS00645 PF06429 Flagellar basal body rod FlgEFG protein C-terminal COG34_RS00645 PF00460 Flagella basal body rod protein COG34_RS00650 PF07559 Flagellar basal body protein FlaE COG34_RS00650 PF06429 Flagellar basal body rod FlgEFG protein C-terminal COG34_RS00650 PF00460 Flagella basal body rod protein COG34_RS00655 PF13860 FlgD Ig-like domain COG34_RS00655 PF13861 FlgD Tudor-like domain COG34_RS00655 PF03963 Flagellar hook capping protein - N-terminal region COG34_RS00660 PF06429 Flagellar basal body rod FlgEFG protein C-terminal COG34_RS00660 PF00460 Flagella basal body rod protein COG34_RS00665 PF00460 Flagella basal body rod protein COG34_RS00670 PF13144 Chaperone for flagella basal body P-ring formation COG34_RS00675 PF04316 Anti-sigma-28 factor, FlgM COG34_RS00680 PF05130 FlgN protein COG34_RS00685 PF03023 Lipid II flippase MurJ COG34_RS00690 PF01408 Oxidoreductase family, NAD-binding Rossmann fold COG34_RS00695 PF04337 Protein of unknown function, DUF480 COG34_RS00700 PF13302 Acetyltransferase (GNAT) domain COG34_RS00705 PF07690 Major Facilitator Superfamily COG34_RS00710 PF04399 Glutaredoxin 2, C terminal domain COG34_RS00710 PF13417 Glutathione S-transferase, N-terminal domain COG34_RS00715 PF07273 Protein of unknown function (DUF1439) COG34_RS00720 PF01979 Amidohydrolase family COG34_RS00725 PF06183 DinI-like family COG34_RS00735 PF13991 BssS protein family COG34_RS00740 PF01266 FAD dependent oxidoreductase COG34_RS00745 PF10968 Protein of unknown function (DUF2770) COG34_RS00750 PF01292 Prokaryotic cytochrome b561 COG34_RS00755 PF04264 YceI-like domain COG34_RS00760 PF17773 UPF0176 acylphosphatase like domain COG34_RS00760 PF00581 Rhodanese-like domain COG34_RS00760 PF12368 Rhodanase C-terminal COG34_RS00765 PF03279 Bacterial lipid A biosynthesis acyltransferase COG34_RS00770 PF07690 Major Facilitator Superfamily COG34_RS00775 PF13984 MsyB protein COG34_RS00780 PF07119 Protein of unknown function (DUF1375) COG34_RS00785 PF00535 Glycosyl transferase family 2 COG34_RS00790 PF04349 Periplasmic glucan biosynthesis protein, MdoG COG34_RS00805 PF01757 Acyltransferase family COG34_RS00810 PF13091 PLD-like domain COG34_RS00815 PF01661 Macro domain COG34_RS00825 PF10610 Thin aggregative fimbriae synthesis protein COG34_RS00830 PF07012 Curlin associated repeat COG34_RS00835 PF07012 Curlin associated repeat COG34_RS00850 PF00196 Bacterial regulatory proteins, luxR family COG34_RS00855 PF10627 Curli assembly protein CsgE COG34_RS00860 PF10614 Type VIII secretion system (T8SS), CsgF protein COG34_RS00865 PF03783 Curli production assembly/transport component CsgG COG34_RS00870 PF06496 Protein of unknown function (DUF1097) COG34_RS00875 PF02613 Nitrate reductase delta subunit COG34_RS00880 PF02811 PHP domain COG34_RS00885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain COG34_RS00910 PF00990 Diguanylate cyclase, GGDEF domain COG34_RS00910 PF17158 Membrane-associated sensor, integral membrane domain COG34_RS00920 PF01522 Polysaccharide deacetylase COG34_RS00920 PF14883 Hypothetical glycosyl hydrolase family 13 COG34_RS00925 PF00535 Glycosyl transferase family 2 COG34_RS00930 PF13994 PgaD-like protein COG34_RS00935 PF02562 PhoH-like protein COG34_RS00945 PF04261 Dyp-type peroxidase family COG34_RS00950 PF09375 Imelysin COG34_RS00950 PF13473 Cupredoxin-like domain COG34_RS00955 PF03239 Iron permease FTR1 family COG34_RS00970 PF00474 Sodium:solute symporter family COG34_RS00985 PF00171 Aldehyde dehydrogenase family COG34_RS00985 PF01619 Proline dehydrogenase COG34_RS00985 PF14850 DNA-binding domain of Proline dehydrogenase COG34_RS00985 PF18327 Proline utilization A proline dehydrogenase N-terminal domain COG34_RS00990 PF00440 Bacterial regulatory proteins, tetR family COG34_RS00990 PF08362 YcdC-like protein, C-terminal region COG34_RS00995 PF00296 Luciferase-like monooxygenase COG34_RS01000 PF00857 Isochorismatase family COG34_RS01005 PF01042 Endoribonuclease L-PSP COG34_RS01010 PF00561 alpha/beta hydrolase fold COG34_RS01015 PF00881 Nitroreductase family COG34_RS01020 PF01613 Flavin reductase like domain COG34_RS01025 PF00860 Permease family COG34_RS01030 PF10685 Stress-induced bacterial acidophilic repeat motif COG34_RS01040 PF03358 NADPH-dependent FMN reductase COG34_RS01045 PF13993 YccJ-like protein COG34_RS01050 PF00328 Histidine phosphatase superfamily (branch 2) COG34_RS01060 PF00226 DnaJ domain COG34_RS01060 PF01556 DnaJ C terminal domain COG34_RS01070 PF02613 Nitrate reductase delta subunit COG34_RS01075 PF01568 Molydopterin dinucleotide binding domain COG34_RS01075 PF00384 Molybdopterin oxidoreductase COG34_RS01075 PF18364 Molybdopterin oxidoreductase N-terminal domain COG34_RS01080 PF03264 NapC/NirT cytochrome c family, N-terminal region COG34_RS01085 PF00072 Response regulator receiver domain COG34_RS01085 PF00486 Transcriptional regulatory protein, C terminal COG34_RS01090 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family COG34_RS01095 PF01627 Hpt domain COG34_RS01095 PF00512 His Kinase A (phospho-acceptor) domain COG34_RS01095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS01095 PF00672 HAMP domain COG34_RS01095 PF00072 Response regulator receiver domain COG34_RS01100 PF12801 4Fe-4S binding domain COG34_RS01105 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system COG34_RS01110 PF15939 Putative antitoxin of bacterial toxin-antitoxin system COG34_RS01120 PF00313 'Cold-shock' DNA-binding domain COG34_RS01125 PF00313 'Cold-shock' DNA-binding domain COG34_RS01135 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF COG34_RS01140 PF06251 Capsule biosynthesis GfcC COG34_RS01145 PF06082 Exopolysaccharide biosynthesis protein YbjH COG34_RS01150 PF10531 SLBB domain COG34_RS01150 PF18412 Outer-membrane lipoprotein Wza C-terminal domain COG34_RS01150 PF02563 Polysaccharide biosynthesis/export protein COG34_RS01155 PF01451 Low molecular weight phosphotyrosine protein phosphatase COG34_RS01160 PF02706 Chain length determinant protein COG34_RS01160 PF13807 G-rich domain on putative tyrosine kinase COG34_RS01160 PF13614 AAA domain COG34_RS01165 PF00328 Histidine phosphatase superfamily (branch 2) COG34_RS01170 PF08173 Membrane bound YbgT-like protein COG34_RS01175 PF02322 Cytochrome bd terminal oxidase subunit II COG34_RS01180 PF01654 Cytochrome bd terminal oxidase subunit I COG34_RS01185 PF04809 HupH hydrogenase expression protein, C-terminal conserved region COG34_RS01190 PF07449 Hydrogenase-1 expression protein HyaE COG34_RS01195 PF01750 Hydrogenase maturation protease COG34_RS01200 PF01292 Prokaryotic cytochrome b561 COG34_RS01205 PF00374 Nickel-dependent hydrogenase COG34_RS01210 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit COG34_RS01210 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal COG34_RS01220 PF01027 Inhibitor of apoptosis-promoting Bax1 COG34_RS01225 PF04358 DsrC like protein COG34_RS01230 PF00708 Acylphosphatase COG34_RS01235 PF10672 S-adenosylmethionine-dependent methyltransferase COG34_RS01235 PF17785 PUA-like domain COG34_RS01240 PF08755 Hemimethylated DNA-binding protein YccV like COG34_RS01245 PF13380 CoA binding domain COG34_RS01250 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) COG34_RS01255 PF02142 MGS-like domain COG34_RS01260 PF12462 DNA helicase IV / RNA helicase N terminal COG34_RS01260 PF13361 UvrD-like helicase C-terminal domain COG34_RS01260 PF00580 UvrD/REP helicase N-terminal domain COG34_RS01265 PF03733 Inner membrane component domain COG34_RS01270 PF12805 FUSC-like inner membrane protein yccS COG34_RS01275 PF04994 TfoX C-terminal domain COG34_RS01275 PF04993 TfoX N-terminal domain COG34_RS01280 PF03846 Cell division inhibitor SulA COG34_RS01290 PF00691 OmpA family COG34_RS01290 PF01389 OmpA-like transmembrane domain COG34_RS01295 PF06303 MatP N-terminal domain COG34_RS01295 PF17414 MatP C-terminal ribbon-helix-helix domain COG34_RS01300 PF13654 AAA domain COG34_RS01300 PF05362 Lon protease (S16) C-terminal proteolytic domain COG34_RS01305 PF07977 FabA-like domain COG34_RS01310 PF04957 Ribosome modulation factor COG34_RS01315 PF03886 ABC-type transport auxiliary lipoprotein component COG34_RS01320 PF02470 MlaD protein COG34_RS01325 PF04403 Paraquat-inducible protein A COG34_RS01330 PF00005 ABC transporter COG34_RS01330 PF16326 ABC transporter C-terminal domain COG34_RS01330 PF12848 ABC transporter COG34_RS01335 PF01170 Putative RNA methylase family UPF0020 COG34_RS01335 PF10672 S-adenosylmethionine-dependent methyltransferase COG34_RS01335 PF02926 THUMP domain COG34_RS01340 PF00111 2Fe-2S iron-sulfur cluster binding domain COG34_RS01340 PF03476 MOSC N-terminal beta barrel domain COG34_RS01340 PF03473 MOSC domain COG34_RS01345 PF07126 Cell-division protein ZapC COG34_RS01350 PF01180 Dihydroorotate dehydrogenase COG34_RS01355 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain COG34_RS01355 PF02753 Pili assembly chaperone PapD, C-terminal domain COG34_RS01360 PF00419 Fimbrial protein COG34_RS01365 PF00419 Fimbrial protein COG34_RS01370 PF00419 Fimbrial protein COG34_RS01375 PF00577 Outer membrane usher protein COG34_RS01375 PF13954 PapC N-terminal domain COG34_RS01375 PF13953 PapC C-terminal domain COG34_RS01380 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain COG34_RS01380 PF02753 Pili assembly chaperone PapD, C-terminal domain COG34_RS01385 PF00419 Fimbrial protein COG34_RS01395 PF03358 NADPH-dependent FMN reductase COG34_RS01400 PF09084 NMT1/THI5 like COG34_RS01405 PF00296 Luciferase-like monooxygenase COG34_RS01410 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS01415 PF00005 ABC transporter COG34_RS01420 PF01433 Peptidase family M1 domain COG34_RS01420 PF17432 Domain of unknown function (DUF3458_C) ARM repeats COG34_RS01420 PF11940 Domain of unknown function (DUF3458) Ig-like fold COG34_RS01425 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family COG34_RS01425 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain COG34_RS01430 PF01336 OB-fold nucleic acid binding domain COG34_RS01430 PF00152 tRNA synthetases class II (D, K and N) COG34_RS01435 PF00267 Gram-negative porin COG34_RS01445 PF00155 Aminotransferase class I and II COG34_RS01450 PF00753 Metallo-beta-lactamase superfamily COG34_RS01455 PF05951 Bacterial protein of unknown function (DUF882) COG34_RS01465 PF03734 L,D-transpeptidase catalytic domain COG34_RS01465 PF01471 Putative peptidoglycan binding domain COG34_RS01470 PF04310 MukB N-terminal COG34_RS01470 PF16330 MukB hinge domain COG34_RS01475 PF04288 MukE-like family COG34_RS01480 PF17193 MukF C-terminal domain COG34_RS01480 PF17192 MukF middle domain COG34_RS01480 PF03882 MukF winged-helix domain COG34_RS01485 PF13847 Methyltransferase domain COG34_RS01495 PF02698 DUF218 domain COG34_RS01500 PF01636 Phosphotransferase enzyme family COG34_RS01505 PF02348 Cytidylyltransferase COG34_RS01510 PF03966 Trm112p-like protein COG34_RS01515 PF06224 Winged helix DNA-binding domain COG34_RS01520 PF02606 Tetraacyldisaccharide-1-P 4'-kinase COG34_RS01525 PF00664 ABC transporter transmembrane region COG34_RS01525 PF00005 ABC transporter COG34_RS01530 PF00753 Metallo-beta-lactamase superfamily COG34_RS01530 PF03772 Competence protein COG34_RS01535 PF00216 Bacterial DNA-binding protein COG34_RS01540 PF00575 S1 RNA binding domain COG34_RS01545 PF02224 Cytidylate kinase COG34_RS01550 PF01435 Peptidase family M48 COG34_RS01555 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) COG34_RS01560 PF00266 Aminotransferase class-V COG34_RS01565 PF04239 Protein of unknown function (DUF421) COG34_RS01570 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding COG34_RS01570 PF18381 YcaO cyclodehydratase C-terminal domain COG34_RS01575 PF01226 Formate/nitrite transporter COG34_RS01580 PF02901 Pyruvate formate lyase-like COG34_RS01580 PF01228 Glycine radical COG34_RS01585 PF04055 Radical SAM superfamily COG34_RS01590 PF02525 Flavodoxin-like fold COG34_RS01595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS01595 PF03466 LysR substrate binding domain COG34_RS01600 PF13520 Amino acid permease COG34_RS01605 PF07690 Major Facilitator Superfamily COG34_RS01610 PF00857 Isochorismatase family COG34_RS01615 PF04976 DMSO reductase anchor subunit (DmsC) COG34_RS01620 PF12800 4Fe-4S binding domain COG34_RS01620 PF13247 4Fe-4S dicluster domain COG34_RS01625 PF01568 Molydopterin dinucleotide binding domain COG34_RS01625 PF00384 Molybdopterin oxidoreductase COG34_RS01625 PF04879 Molybdopterin oxidoreductase Fe4S4 domain COG34_RS01630 PF02403 Seryl-tRNA synthetase N-terminal domain COG34_RS01630 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) COG34_RS01635 PF16193 AAA C-terminal domain COG34_RS01635 PF12002 MgsA AAA+ ATPase C terminal COG34_RS01635 PF00004 ATPase family associated with various cellular activities (AAA) COG34_RS01640 PF03548 Outer membrane lipoprotein carrier protein LolA COG34_RS01645 PF09397 Ftsk gamma domain COG34_RS01645 PF01580 FtsK/SpoIIIE family COG34_RS01645 PF13491 4TM region of DNA translocase FtsK/SpoIIIE COG34_RS01645 PF17854 FtsK alpha domain COG34_RS01650 PF01037 Lrp/AsnC ligand binding domain COG34_RS01660 PF07992 Pyridine nucleotide-disulphide oxidoreductase COG34_RS01665 PF00664 ABC transporter transmembrane region COG34_RS01665 PF00005 ABC transporter COG34_RS01670 PF00664 ABC transporter transmembrane region COG34_RS01670 PF00005 ABC transporter COG34_RS01675 PF03588 Leucyl/phenylalanyl-tRNA protein transferase COG34_RS01680 PF01176 Translation initiation factor 1A / IF-1 COG34_RS01690 PF02861 Clp amino terminal domain, pathogenicity island component COG34_RS01690 PF00004 ATPase family associated with various cellular activities (AAA) COG34_RS01690 PF10431 C-terminal, D2-small domain, of ClpB protein COG34_RS01690 PF07724 AAA domain (Cdc48 subfamily) COG34_RS01690 PF17871 AAA lid domain COG34_RS01695 PF02617 ATP-dependent Clp protease adaptor protein ClpS COG34_RS01700 PF00313 'Cold-shock' DNA-binding domain COG34_RS01705 PF12704 MacB-like periplasmic core domain COG34_RS01705 PF02687 FtsX-like permease family COG34_RS01705 PF00005 ABC transporter COG34_RS01710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion COG34_RS01715 PF04393 Protein of unknown function (DUF535) COG34_RS01720 PF11398 Protein of unknown function (DUF2813) COG34_RS01725 PF00230 Major intrinsic protein COG34_RS01735 PF03956 Lysine exporter LysO COG34_RS01740 PF03063 Prismane/CO dehydrogenase family COG34_RS01745 PF00111 2Fe-2S iron-sulfur cluster binding domain COG34_RS01745 PF00175 Oxidoreductase NAD-binding domain COG34_RS01745 PF00970 Oxidoreductase FAD-binding domain COG34_RS01750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain COG34_RS01750 PF00205 Thiamine pyrophosphate enzyme, central domain COG34_RS01750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain COG34_RS01755 PF01212 Beta-eliminating lyase COG34_RS01760 PF13460 NAD(P)H-binding COG34_RS01760 PF11066 Protein of unknown function (DUF2867) COG34_RS01765 PF01370 NAD dependent epimerase/dehydratase family COG34_RS01770 PF01510 N-acetylmuramoyl-L-alanine amidase COG34_RS01775 PF01906 Putative heavy-metal-binding COG34_RS01780 PF12883 Protein of unknown function (DUF3828) COG34_RS01785 PF00005 ABC transporter COG34_RS01790 PF00497 Bacterial extracellular solute-binding proteins, family 3 COG34_RS01795 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS01800 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS01805 PF00497 Bacterial extracellular solute-binding proteins, family 3 COG34_RS01810 PF05958 tRNA (Uracil-5-)-methyltransferase COG34_RS01815 PF10767 Protein of unknown function (DUF2593) COG34_RS01820 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS01825 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS01830 PF08402 TOBE domain COG34_RS01830 PF00005 ABC transporter COG34_RS01835 PF13416 Bacterial extracellular solute-binding protein COG34_RS01845 PF10722 Putative bacterial sensory transduction regulator COG34_RS01850 PF08443 RimK-like ATP-grasp domain COG34_RS01850 PF18030 RimK PreATP-grasp domain COG34_RS01855 PF00881 Nitroreductase family COG34_RS01860 PF07214 Protein of unknown function (DUF1418) COG34_RS01865 PF00462 Glutaredoxin COG34_RS01870 PF11045 Putative inner membrane protein of Enterobacteriaceae COG34_RS01875 PF02080 TrkA-C domain COG34_RS01875 PF06826 Predicted Permease Membrane Region COG34_RS01880 PF00440 Bacterial regulatory proteins, tetR family COG34_RS01885 PF07690 Major Facilitator Superfamily COG34_RS01900 PF07690 Major Facilitator Superfamily COG34_RS01905 PF01569 PAP2 superfamily COG34_RS01910 PF00455 DeoR C terminal sensor domain COG34_RS01910 PF08220 DeoR-like helix-turn-helix domain COG34_RS01915 PF00768 D-alanyl-D-alanine carboxypeptidase COG34_RS01915 PF07943 Penicillin-binding protein 5, C-terminal domain COG34_RS01920 PF13417 Glutathione S-transferase, N-terminal domain COG34_RS01920 PF00043 Glutathione S-transferase, C-terminal domain COG34_RS01925 PF07995 Glucose / Sorbosone dehydrogenase COG34_RS01930 PF10799 Biofilm formation protein (YliH/bssR) COG34_RS01935 PF00919 Uncharacterized protein family UPF0004 COG34_RS01935 PF18693 TRAM domain COG34_RS01935 PF04055 Radical SAM superfamily COG34_RS01940 PF17156 Gammaproteobacterial periplasmic sensor domain COG34_RS01940 PF00990 Diguanylate cyclase, GGDEF domain COG34_RS01945 PF00563 EAL domain COG34_RS01945 PF17153 Periplasmic sensor domain, extracellular COG34_RS01950 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS01950 PF12911 N-terminal TM domain of oligopeptide transport permease C COG34_RS01955 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS01960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle COG34_RS01965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region COG34_RS01965 PF00005 ABC transporter COG34_RS01970 PF01112 Asparaginase COG34_RS01975 PF03454 MoeA C-terminal region (domain IV) COG34_RS01975 PF00994 Probable molybdopterin binding domain COG34_RS01975 PF03453 MoeA N-terminal region (domain I and II) COG34_RS01980 PF00899 ThiF family COG34_RS01985 PF00923 Transaldolase/Fructose-6-phosphate aldolase COG34_RS01990 PF04055 Radical SAM superfamily COG34_RS01995 PF02901 Pyruvate formate lyase-like COG34_RS01995 PF01228 Glycine radical COG34_RS02005 PF07350 Protein of unknown function (DUF1479) COG34_RS02010 PF01548 Transposase COG34_RS02010 PF02371 Transposase IS116/IS110/IS902 family COG34_RS02020 PF00005 ABC transporter COG34_RS02020 PF12848 ABC transporter COG34_RS02025 PF03734 L,D-transpeptidase catalytic domain COG34_RS02025 PF17969 L,D-transpeptidase C-terminal domain COG34_RS02030 PF03600 Citrate transporter COG34_RS02035 PF01325 Iron dependent repressor, N-terminal DNA binding domain COG34_RS02035 PF02742 Iron dependent repressor, metal binding and dimerisation domain COG34_RS02045 PF00884 Sulfatase COG34_RS02050 PF13505 Outer membrane protein beta-barrel domain COG34_RS02055 PF00892 EamA-like transporter family COG34_RS02065 PF00210 Ferritin-like domain COG34_RS02080 PF00497 Bacterial extracellular solute-binding proteins, family 3 COG34_RS02085 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS02090 PF00005 ABC transporter COG34_RS02095 PF00924 Mechanosensitive ion channel COG34_RS02100 PF05971 RNA methyltransferase COG34_RS02105 PF07338 Protein of unknown function (DUF1471) COG34_RS02110 PF00593 TonB dependent receptor COG34_RS02110 PF07715 TonB-dependent Receptor Plug Domain COG34_RS02115 PF18331 PKHD-type hydroxylase C-terminal domain COG34_RS02115 PF13640 2OG-Fe(II) oxygenase superfamily COG34_RS02120 PF01258 Prokaryotic dksA/traR C4-type zinc finger COG34_RS02125 PF07338 Protein of unknown function (DUF1471) COG34_RS02130 PF02615 Malate/L-lactate dehydrogenase COG34_RS02135 PF02885 Glycosyl transferase family, helical bundle domain COG34_RS02140 PF00270 DEAD/DEAH box helicase COG34_RS02140 PF13307 Helicase C-terminal domain COG34_RS02140 PF06733 DEAD_2 COG34_RS02150 PF08719 Domain of unknown function (DUF1768) COG34_RS02155 PF00270 DEAD/DEAH box helicase COG34_RS02155 PF00271 Helicase conserved C-terminal domain COG34_RS02160 PF09209 Tetracyclin repressor-like, C-terminal domain COG34_RS02160 PF00440 Bacterial regulatory proteins, tetR family COG34_RS02165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion COG34_RS02170 PF00005 ABC transporter COG34_RS02185 PF11076 Putative inner membrane protein YbhQ COG34_RS02190 PF03372 Endonuclease/Exonuclease/phosphatase family COG34_RS02195 PF13091 PLD-like domain COG34_RS02200 PF03706 Lysylphosphatidylglycerol synthase TM region COG34_RS02205 PF01027 Inhibitor of apoptosis-promoting Bax1 COG34_RS02215 PF01027 Inhibitor of apoptosis-promoting Bax1 COG34_RS02220 PF02391 MoaE protein COG34_RS02225 PF02597 ThiS family COG34_RS02230 PF01967 MoaC family COG34_RS02235 PF00994 Probable molybdopterin binding domain COG34_RS02240 PF06463 Molybdenum Cofactor Synthesis C COG34_RS02240 PF04055 Radical SAM superfamily COG34_RS02245 PF01933 Uncharacterised protein family UPF0052 COG34_RS02250 PF17757 UvrB interaction domain COG34_RS02250 PF02151 UvrB/uvrC motif COG34_RS02250 PF04851 Type III restriction enzyme, res subunit COG34_RS02250 PF00271 Helicase conserved C-terminal domain COG34_RS02250 PF12344 Ultra-violet resistance protein B COG34_RS02260 PF08241 Methyltransferase domain COG34_RS02265 PF00155 Aminotransferase class I and II COG34_RS02270 PF06968 Biotin and Thiamin Synthesis associated domain COG34_RS02270 PF04055 Radical SAM superfamily COG34_RS02275 PF00202 Aminotransferase class-III COG34_RS02280 PF01161 Phosphatidylethanolamine-binding protein COG34_RS02290 PF17158 Membrane-associated sensor, integral membrane domain COG34_RS02290 PF00990 Diguanylate cyclase, GGDEF domain COG34_RS02295 PF02413 Caudovirales tail fibre assembly protein, lambda gpK COG34_RS02300 PF08400 Prophage tail fibre N-terminal COG34_RS02300 PF03335 Phage tail fibre repeat COG34_RS02300 PF07484 Phage Tail Collar Domain COG34_RS02305 PF06316 Enterobacterial Ail/Lom protein COG34_RS02335 PF06791 Prophage tail length tape measure protein COG34_RS02375 PF03864 Phage major capsid protein E COG34_RS02385 PF01957 NfeD-like C-terminal, partner-binding COG34_RS02385 PF01972 Serine dehydrogenase proteinase COG34_RS02395 PF02831 gpW COG34_RS02400 PF02413 Caudovirales tail fibre assembly protein, lambda gpK COG34_RS02405 PF07471 Phage DNA packaging protein Nu1 COG34_RS02415 PF13132 Domain of unknown function (DUF3950) COG34_RS02420 PF06291 Bor protein COG34_RS02425 PF03245 Bacteriophage Rz lysis protein COG34_RS02430 PF00959 Phage lysozyme COG34_RS02435 PF04971 Bacteriophage P21 holin S COG34_RS02440 PF00267 Gram-negative porin COG34_RS02445 PF06530 Phage antitermination protein Q COG34_RS02455 PF05866 Endodeoxyribonuclease RusA COG34_RS02460 PF07102 Protein of unknown function (DUF1364) COG34_RS02490 PF13408 Recombinase zinc beta ribbon domain COG34_RS02490 PF00239 Resolvase, N terminal domain COG34_RS02490 PF07508 Recombinase COG34_RS02495 PF00893 Small Multidrug Resistance protein COG34_RS02505 PF06992 Replication protein P COG34_RS02525 PF01381 Helix-turn-helix COG34_RS02525 PF00717 Peptidase S24-like COG34_RS02610 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain COG34_RS02610 PF00589 Phage integrase family COG34_RS02615 PF01095 Pectinesterase COG34_RS02620 PF00330 Aconitase family (aconitate hydratase) COG34_RS02620 PF00694 Aconitase C-terminal domain COG34_RS02625 PF00939 Sodium:sulfate symporter transmembrane region COG34_RS02630 PF04303 PrpF protein COG34_RS02635 PF03466 LysR substrate binding domain COG34_RS02635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS02640 PF10282 Lactonase, 7-bladed beta-propeller COG34_RS02650 PF03459 TOBE domain COG34_RS02650 PF00005 ABC transporter COG34_RS02655 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS02670 PF10766 Multidrug efflux pump-associated protein AcrZ COG34_RS02675 PF03459 TOBE domain COG34_RS02675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS02680 PF00005 ABC transporter COG34_RS02685 PF16363 GDP-mannose 4,6 dehydratase COG34_RS02690 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain COG34_RS02690 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain COG34_RS02695 PF10509 Galactokinase galactose-binding signature COG34_RS02695 PF00288 GHMP kinases N terminal domain COG34_RS02695 PF08544 GHMP kinases C terminal COG34_RS02700 PF01263 Aldose 1-epimerase COG34_RS02705 PF00300 Histidine phosphatase superfamily (branch 1) COG34_RS02710 PF00793 DAHP synthetase I family COG34_RS02720 PF13985 YbgS-like protein COG34_RS02725 PF01545 Cation efflux family COG34_RS02730 PF04973 Nicotinamide mononucleotide transporter COG34_RS02735 PF02445 Quinolinate synthetase A protein COG34_RS02780 PF13174 Tetratricopeptide repeat COG34_RS02780 PF16331 TolA binding protein trimerisation COG34_RS02785 PF00691 OmpA family COG34_RS02790 PF07676 WD40-like Beta Propeller Repeat COG34_RS02790 PF04052 TolB amino-terminal domain COG34_RS02795 PF06519 TolA C-terminal COG34_RS02800 PF02472 Biopolymer transport protein ExbD/TolR COG34_RS02805 PF01618 MotA/TolQ/ExbB proton channel family COG34_RS02810 PF03061 Thioesterase superfamily COG34_RS02815 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) COG34_RS02820 PF08173 Membrane bound YbgT-like protein COG34_RS02825 PF02322 Cytochrome bd terminal oxidase subunit II COG34_RS02830 PF01654 Cytochrome bd terminal oxidase subunit I COG34_RS02840 PF09261 Alpha mannosidase middle domain COG34_RS02840 PF07748 Glycosyl hydrolases family 38 C-terminal domain COG34_RS02840 PF01074 Glycosyl hydrolases family 38 N-terminal domain COG34_RS02845 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit COG34_RS02845 PF02378 Phosphotransferase system, EIIC COG34_RS02845 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 COG34_RS02850 PF07702 UTRA domain COG34_RS02850 PF00392 Bacterial regulatory proteins, gntR family COG34_RS02855 PF02629 CoA binding domain COG34_RS02855 PF00549 CoA-ligase COG34_RS02860 PF00549 CoA-ligase COG34_RS02860 PF08442 ATP-grasp domain COG34_RS02865 PF02817 e3 binding domain COG34_RS02865 PF00364 Biotin-requiring enzyme COG34_RS02865 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) COG34_RS02870 PF16078 2-oxoglutarate dehydrogenase N-terminus COG34_RS02870 PF00676 Dehydrogenase E1 component COG34_RS02870 PF02779 Transketolase, pyrimidine binding domain COG34_RS02870 PF16870 2-oxoglutarate dehydrogenase C-terminal COG34_RS02875 PF13085 2Fe-2S iron-sulfur cluster binding domain COG34_RS02880 PF00890 FAD binding domain COG34_RS02880 PF02910 Fumarate reductase flavoprotein C-term COG34_RS02885 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit COG34_RS02890 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit COG34_RS02905 PF00285 Citrate synthase, C-terminal domain COG34_RS02910 PF00419 Fimbrial protein COG34_RS02915 PF13954 PapC N-terminal domain COG34_RS02915 PF00577 Outer membrane usher protein COG34_RS02915 PF13953 PapC C-terminal domain COG34_RS02920 PF02753 Pili assembly chaperone PapD, C-terminal domain COG34_RS02920 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain COG34_RS02925 PF00419 Fimbrial protein COG34_RS02930 PF05145 Transition state regulatory protein AbrB COG34_RS02935 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain COG34_RS02935 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain COG34_RS02935 PF06827 Zinc finger found in FPG and IleRS COG34_RS02940 PF03746 LamB/YcsF family COG34_RS02945 PF02626 Carboxyltransferase domain, subdomain A and B COG34_RS02950 PF02682 Carboxyltransferase domain, subdomain C and D COG34_RS02955 PF01784 NIF3 (NGG1p interacting factor 3) COG34_RS02960 PF00854 POT family COG34_RS02965 PF00875 DNA photolyase COG34_RS02965 PF03441 FAD binding domain of DNA photolyase COG34_RS02970 PF08349 Protein of unknown function (DUF1722) COG34_RS03000 PF05593 RHS Repeat COG34_RS03000 PF03527 RHS protein COG34_RS03005 PF10725 Protein of unknown function (DUF2517) COG34_RS03010 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) COG34_RS03015 PF03814 Potassium-transporting ATPase A subunit COG34_RS03025 PF02669 K+-transporting ATPase, c chain COG34_RS03030 PF02702 Osmosensitive K+ channel His kinase sensor domain COG34_RS03030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS03030 PF13492 GAF domain COG34_RS03030 PF13493 Domain of unknown function (DUF4118) COG34_RS03030 PF00512 His Kinase A (phospho-acceptor) domain COG34_RS03035 PF00486 Transcriptional regulatory protein, C terminal COG34_RS03035 PF00072 Response regulator receiver domain COG34_RS03045 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain COG34_RS03045 PF01276 Orn/Lys/Arg decarboxylase, major domain COG34_RS03045 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain COG34_RS03050 PF13520 Amino acid permease COG34_RS03055 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain COG34_RS03055 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I COG34_RS03055 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III COG34_RS03055 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II COG34_RS03060 PF03925 SeqA protein C-terminal domain COG34_RS03060 PF17206 SeqA protein N-terminal domain COG34_RS03065 PF12697 Alpha/beta hydrolase family COG34_RS03070 PF01402 Ribbon-helix-helix protein, copG family COG34_RS03075 PF00258 Flavodoxin COG34_RS03085 PF01475 Ferric uptake regulator family COG34_RS03090 PF13982 YbfN-like lipoprotein COG34_RS03095 PF03573 outer membrane porin, OprD family COG34_RS03105 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain COG34_RS03105 PF00749 tRNA synthetases class I (E and Q), catalytic domain COG34_RS03110 PF02378 Phosphotransferase system, EIIC COG34_RS03110 PF00367 phosphotransferase system, EIIB COG34_RS03110 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 COG34_RS03115 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase COG34_RS03120 PF01979 Amidohydrolase family COG34_RS03125 PF01047 MarR family COG34_RS03125 PF00480 ROK family COG34_RS03130 PF13344 Haloacid dehalogenase-like hydrolase COG34_RS03140 PF13537 Glutamine amidotransferase domain COG34_RS03140 PF00733 Asparagine synthase COG34_RS03185 PF01494 FAD binding domain COG34_RS03190 PF01938 TRAM domain COG34_RS03190 PF00919 Uncharacterized protein family UPF0004 COG34_RS03190 PF04055 Radical SAM superfamily COG34_RS03195 PF02562 PhoH-like protein COG34_RS03200 PF02130 Uncharacterized protein family UPF0054 COG34_RS03205 PF00571 CBS domain COG34_RS03205 PF03471 Transporter associated domain COG34_RS03210 PF00795 Carbon-nitrogen hydrolase COG34_RS03220 PF01694 Rhomboid family COG34_RS03225 PF00497 Bacterial extracellular solute-binding proteins, family 3 COG34_RS03230 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS03235 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS03240 PF00005 ABC transporter COG34_RS03245 PF01156 Inosine-uridine preferring nucleoside hydrolase COG34_RS03250 PF00012 Hsp70 protein COG34_RS03260 PF06889 Protein of unknown function (DUF1266) COG34_RS03265 PF08238 Sel1 repeat COG34_RS03275 PF06889 Protein of unknown function (DUF1266) COG34_RS03280 PF08238 Sel1 repeat COG34_RS03285 PF07295 Zinc-ribbon containing domain COG34_RS03290 PF13603 Leucyl-tRNA synthetase, Domain 2 COG34_RS03290 PF00133 tRNA synthetases class I (I, L, M and V) COG34_RS03290 PF08264 Anticodon-binding domain of tRNA COG34_RS03295 PF04390 Lipopolysaccharide-assembly COG34_RS03300 PF06144 DNA polymerase III, delta subunit COG34_RS03300 PF14840 Processivity clamp loader gamma complex DNA pol III C-term COG34_RS03305 PF01467 Cytidylyltransferase-like COG34_RS03310 PF00300 Histidine phosphatase superfamily (branch 1) COG34_RS03320 PF02590 Predicted SPOUT methyltransferase COG34_RS03325 PF03717 Penicillin-binding Protein dimerisation domain COG34_RS03325 PF00905 Penicillin binding protein transpeptidase domain COG34_RS03330 PF01098 Cell cycle protein COG34_RS03335 PF03330 Lytic transglycolase COG34_RS03335 PF05036 Sporulation related domain COG34_RS03340 PF07943 Penicillin-binding protein 5, C-terminal domain COG34_RS03340 PF00768 D-alanyl-D-alanine carboxypeptidase COG34_RS03345 PF04359 Protein of unknown function (DUF493) COG34_RS03350 PF03099 Biotin/lipoate A/B protein ligase family COG34_RS03360 PF03466 LysR substrate binding domain COG34_RS03360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS03370 PF04055 Radical SAM superfamily COG34_RS03370 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family COG34_RS03375 PF02416 mttA/Hcf106 family COG34_RS03380 PF00795 Carbon-nitrogen hydrolase COG34_RS03385 PF02537 CrcB-like protein, Camphor Resistance (CrcB) COG34_RS03390 PF00313 'Cold-shock' DNA-binding domain COG34_RS03395 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP COG34_RS03405 PF03606 C4-dicarboxylate anaerobic carrier COG34_RS03410 PF00072 Response regulator receiver domain COG34_RS03410 PF12431 Transcriptional regulator COG34_RS03415 PF17203 Single cache domain 3 COG34_RS03415 PF00989 PAS fold COG34_RS03415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS03415 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain COG34_RS03420 PF08218 Citrate lyase ligase C-terminal domain COG34_RS03425 PF06857 Malonate decarboxylase delta subunit (MdcD) COG34_RS03430 PF03328 HpcH/HpaI aldolase/citrate lyase family COG34_RS03435 PF04223 Citrate lyase, alpha subunit (CitF) COG34_RS03440 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase COG34_RS03445 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase COG34_RS03450 PF00939 Sodium:sulfate symporter transmembrane region COG34_RS03455 PF00445 Ribonuclease T2 family COG34_RS03465 PF14760 Rnk N-terminus COG34_RS03465 PF01272 Transcription elongation factor, GreA/GreB, C-term COG34_RS03475 PF00107 Zinc-binding dehydrogenase COG34_RS03475 PF08240 Alcohol dehydrogenase GroES-like domain COG34_RS03475 PF13823 Alcohol dehydrogenase GroES-associated COG34_RS03480 PF00582 Universal stress protein family COG34_RS03485 PF07992 Pyridine nucleotide-disulphide oxidoreductase COG34_RS03485 PF13192 Thioredoxin domain COG34_RS03495 PF10417 C-terminal domain of 1-Cys peroxiredoxin COG34_RS03495 PF00578 AhpC/TSA family COG34_RS03500 PF13098 Thioredoxin-like domain COG34_RS03505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS03505 PF03466 LysR substrate binding domain COG34_RS03510 PF11922 Domain of unknown function (DUF3440) COG34_RS03510 PF01507 Phosphoadenosine phosphosulfate reductase family COG34_RS03515 PF02195 ParB-like nuclease domain COG34_RS03520 PF00155 Aminotransferase class I and II COG34_RS03525 PF00465 Iron-containing alcohol dehydrogenase COG34_RS03530 PF04328 Selenoprotein, putative COG34_RS03535 PF13722 5TM C-terminal transporter carbon starvation CstA COG34_RS03535 PF02554 Carbon starvation protein CstA COG34_RS03540 PF03061 Thioesterase superfamily COG34_RS03550 PF00550 Phosphopantetheine attachment site COG34_RS03550 PF00857 Isochorismatase family COG34_RS03555 PF13193 AMP-binding enzyme C-terminal domain COG34_RS03555 PF00501 AMP-binding enzyme COG34_RS03560 PF00425 chorismate binding enzyme COG34_RS03570 PF01497 Periplasmic binding protein COG34_RS03575 PF05977 Transmembrane secretion effector COG34_RS03580 PF01032 FecCD transport family COG34_RS03585 PF01032 FecCD transport family COG34_RS03590 PF00005 ABC transporter COG34_RS03595 PF02706 Chain length determinant protein COG34_RS03600 PF00501 AMP-binding enzyme COG34_RS03600 PF13193 AMP-binding enzyme C-terminal domain COG34_RS03600 PF00668 Condensation domain COG34_RS03600 PF00975 Thioesterase domain COG34_RS03600 PF00550 Phosphopantetheine attachment site COG34_RS03605 PF03621 MbtH-like protein COG34_RS03610 PF00756 Putative esterase COG34_RS03610 PF11806 Domain of unknown function (DUF3327) COG34_RS03620 PF00593 TonB dependent receptor COG34_RS03620 PF07715 TonB-dependent Receptor Plug Domain COG34_RS03625 PF01648 4'-phosphopantetheinyl transferase superfamily COG34_RS03625 PF17837 4'-phosphopantetheinyl transferase N-terminal domain COG34_RS03630 PF01848 Hok/gef family COG34_RS03645 PF04107 Glutamate-cysteine ligase family 2(GCS2) COG34_RS03650 PF06643 Protein of unknown function (DUF1158) COG34_RS03655 PF04237 YjbR COG34_RS03660 PF00881 Nitroreductase family COG34_RS03665 PF00924 Mechanosensitive ion channel COG34_RS03670 PF00324 Amino acid permease COG34_RS03675 PF00873 AcrB/AcrD/AcrF family COG34_RS03680 PF00529 HlyD membrane-fusion protein of T1SS COG34_RS03680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion COG34_RS03685 PF11604 Copper binding periplasmic protein CusF COG34_RS03690 PF02321 Outer membrane efflux protein COG34_RS03700 PF00072 Response regulator receiver domain COG34_RS03700 PF00486 Transcriptional regulatory protein, C terminal COG34_RS03705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS03705 PF00512 His Kinase A (phospho-acceptor) domain COG34_RS03705 PF00672 HAMP domain COG34_RS03710 PF04717 Type VI secretion system, phage-baseplate injector COG34_RS03725 PF05488 PAAR motif COG34_RS03725 PF05593 RHS Repeat COG34_RS03745 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain COG34_RS03745 PF13632 Glycosyl transferase family group 2 COG34_RS03755 PF14488 Domain of unknown function (DUF4434) COG34_RS03765 PF12833 Helix-turn-helix domain COG34_RS03780 PF00196 Bacterial regulatory proteins, luxR family COG34_RS03780 PF00072 Response regulator receiver domain COG34_RS03785 PF00419 Fimbrial protein COG34_RS03790 PF00419 Fimbrial protein COG34_RS03795 PF00577 Outer membrane usher protein COG34_RS03795 PF13954 PapC N-terminal domain COG34_RS03795 PF13953 PapC C-terminal domain COG34_RS03800 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain COG34_RS03800 PF02753 Pili assembly chaperone PapD, C-terminal domain COG34_RS03805 PF00419 Fimbrial protein COG34_RS03810 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain COG34_RS03810 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain COG34_RS03820 PF04307 LexA-binding, inner membrane-associated putative hydrolase COG34_RS03825 PF01406 tRNA synthetases class I (C) catalytic domain COG34_RS03825 PF09190 DALR domain COG34_RS03830 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD COG34_RS03835 PF12850 Calcineurin-like phosphoesterase superfamily domain COG34_RS03845 PF00731 AIR carboxylase COG34_RS03850 PF02222 ATP-grasp domain COG34_RS03850 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain COG34_RS03855 PF00696 Amino acid kinase family COG34_RS03860 PF11392 Protein of unknown function (DUF2877) COG34_RS03865 PF06545 Protein of unknown function (DUF1116) COG34_RS03870 PF00549 CoA-ligase COG34_RS03870 PF02629 CoA binding domain COG34_RS03875 PF02615 Malate/L-lactate dehydrogenase COG34_RS03880 PF01546 Peptidase family M20/M25/M40 COG34_RS03885 PF05899 Protein of unknown function (DUF861) COG34_RS03885 PF07883 Cupin domain COG34_RS03890 PF02595 Glycerate kinase family COG34_RS03895 PF00860 Permease family COG34_RS03900 PF01979 Amidohydrolase family COG34_RS03905 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin COG34_RS03910 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase COG34_RS03910 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase COG34_RS03915 PF01261 Xylose isomerase-like TIM barrel COG34_RS03920 PF00205 Thiamine pyrophosphate enzyme, central domain COG34_RS03920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain COG34_RS03920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain COG34_RS03925 PF09339 IclR helix-turn-helix domain COG34_RS03925 PF01614 Bacterial transcriptional regulator COG34_RS03930 PF04115 Ureidoglycolate lyase COG34_RS03935 PF03466 LysR substrate binding domain COG34_RS03935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS03950 PF00005 ABC transporter COG34_RS03955 PF13472 GDSL-like Lipase/Acylhydrolase family COG34_RS03960 PF00106 short chain dehydrogenase COG34_RS03965 PF00085 Thioredoxin COG34_RS03970 PF03649 Uncharacterised protein family (UPF0014) COG34_RS03975 PF00005 ABC transporter COG34_RS03980 PF16200 C-terminal region of band_7 COG34_RS03980 PF01145 SPFH domain / Band 7 family COG34_RS03985 PF01957 NfeD-like C-terminal, partner-binding COG34_RS03990 PF13411 MerR HTH family regulatory protein COG34_RS03995 PF13520 Amino acid permease COG34_RS04000 PF04960 Glutaminase COG34_RS04005 PF00403 Heavy-metal-associated domain COG34_RS04010 PF01381 Helix-turn-helix COG34_RS04020 PF01963 TraB family COG34_RS04030 PF04073 Aminoacyl-tRNA editing domain COG34_RS04035 PF00149 Calcineurin-like phosphoesterase COG34_RS04035 PF02872 5'-nucleotidase, C-terminal domain COG34_RS04045 PF07690 Major Facilitator Superfamily COG34_RS04050 PF02254 TrkA-N domain COG34_RS04050 PF00999 Sodium/hydrogen exchanger family COG34_RS04055 PF00294 pfkB family carbohydrate kinase COG34_RS04060 PF07859 alpha/beta hydrolase fold COG34_RS04065 PF00762 Ferrochelatase COG34_RS04070 PF05191 Adenylate kinase, active site lid COG34_RS04080 PF00183 Hsp90 protein COG34_RS04080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS04085 PF13662 Toprim domain COG34_RS04085 PF02132 RecR protein COG34_RS04090 PF02575 YbaB/EbfC DNA-binding family COG34_RS04095 PF12169 DNA polymerase III subunits gamma and tau domain III COG34_RS04095 PF12170 DNA polymerase III tau subunit V interacting with alpha COG34_RS04095 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding COG34_RS04100 PF00156 Phosphoribosyl transferase domain COG34_RS04110 PF04304 Protein of unknown function (DUF454) COG34_RS04115 PF07445 Primosomal replication protein priC COG34_RS04120 PF10689 Protein of unknown function (DUF2496) COG34_RS04125 PF12795 Mechanosensitive ion channel porin domain COG34_RS04125 PF00924 Mechanosensitive ion channel COG34_RS04125 PF12794 Mechanosensitive ion channel inner membrane domain 1 COG34_RS04135 PF00440 Bacterial regulatory proteins, tetR family COG34_RS04135 PF08361 MAATS-type transcriptional repressor, C-terminal region COG34_RS04140 PF00529 HlyD membrane-fusion protein of T1SS COG34_RS04140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion COG34_RS04145 PF00873 AcrB/AcrD/AcrF family COG34_RS04150 PF10757 Biofilm formation regulator YbaJ COG34_RS04155 PF05321 Haemolysin expression modulating protein COG34_RS04160 PF14602 Hexapeptide repeat of succinyl-transferase COG34_RS04160 PF12464 Maltose acetyltransferase COG34_RS04165 PF10777 Inner membrane protein YlaC COG34_RS04170 PF12792 CSS motif domain associated with EAL COG34_RS04170 PF00563 EAL domain COG34_RS04175 PF07237 Protein of unknown function (DUF1428) COG34_RS04185 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain COG34_RS04190 PF09619 Type III secretion system lipoprotein chaperone (YscW) COG34_RS04200 PF00909 Ammonium Transporter Family COG34_RS04205 PF00543 Nitrogen regulatory protein P-II COG34_RS04210 PF00664 ABC transporter transmembrane region COG34_RS04210 PF00005 ABC transporter COG34_RS04215 PF00664 ABC transporter transmembrane region COG34_RS04215 PF00005 ABC transporter COG34_RS04220 PF01037 Lrp/AsnC ligand binding domain COG34_RS04220 PF13404 AsnC-type helix-turn-helix domain COG34_RS04230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle COG34_RS04230 PF12793 Sugar transport-related sRNA regulator N-term COG34_RS04235 PF06508 Queuosine biosynthesis protein QueC COG34_RS04250 PF13145 PPIC-type PPIASE domain COG34_RS04255 PF00216 Bacterial DNA-binding protein COG34_RS04260 PF02190 ATP-dependent protease La (LON) substrate-binding domain COG34_RS04260 PF00004 ATPase family associated with various cellular activities (AAA) COG34_RS04260 PF05362 Lon protease (S16) C-terminal proteolytic domain COG34_RS04265 PF10431 C-terminal, D2-small domain, of ClpB protein COG34_RS04265 PF07724 AAA domain (Cdc48 subfamily) COG34_RS04265 PF06689 ClpX C4-type zinc finger COG34_RS04270 PF00574 Clp protease COG34_RS04275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase COG34_RS04275 PF05697 Bacterial trigger factor protein (TF) COG34_RS04275 PF05698 Bacterial trigger factor protein (TF) C-terminus COG34_RS04285 PF01722 BolA-like protein COG34_RS04290 PF03923 Uncharacterized lipoprotein COG34_RS04290 PF08139 Prokaryotic membrane lipoprotein lipid attachment site COG34_RS04295 PF07690 Major Facilitator Superfamily COG34_RS04300 PF00116 Cytochrome C oxidase subunit II, periplasmic domain COG34_RS04300 PF06481 COX Aromatic Rich Motif COG34_RS04305 PF00115 Cytochrome C and Quinol oxidase polypeptide I COG34_RS04310 PF00510 Cytochrome c oxidase subunit III COG34_RS04315 PF03626 Prokaryotic Cytochrome C oxidase subunit IV COG34_RS04320 PF01040 UbiA prenyltransferase family COG34_RS04340 PF07690 Major Facilitator Superfamily COG34_RS04345 PF04461 Protein of unknown function (DUF520) COG34_RS04350 PF02558 Ketopantoate reductase PanE/ApbA COG34_RS04350 PF08546 Ketopantoate reductase PanE/ApbA C terminal COG34_RS04355 PF01965 DJ-1/PfpI family COG34_RS04360 PF02568 Thiamine biosynthesis protein (ThiI) COG34_RS04360 PF02926 THUMP domain COG34_RS04365 PF02609 Exonuclease VII small subunit COG34_RS04370 PF00348 Polyprenyl synthetase COG34_RS04375 PF13292 1-deoxy-D-xylulose-5-phosphate synthase COG34_RS04375 PF02779 Transketolase, pyrimidine binding domain COG34_RS04375 PF02780 Transketolase, C-terminal domain COG34_RS04380 PF00248 Aldo/keto reductase family COG34_RS04385 PF04608 Phosphatidylglycerophosphatase A COG34_RS04390 PF02769 AIR synthase related protein, C-terminal domain COG34_RS04390 PF00586 AIR synthase related protein, N-terminal domain COG34_RS04395 PF01029 NusB family COG34_RS04400 PF00885 6,7-dimethyl-8-ribityllumazine synthase COG34_RS04405 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region COG34_RS04405 PF01872 RibD C-terminal domain COG34_RS04410 PF03477 ATP cone domain COG34_RS04415 PF11622 Protein of unknown function (DUF3251) COG34_RS04425 PF03502 Nucleoside-specific channel-forming protein, Tsx COG34_RS04430 PF01844 HNH endonuclease COG34_RS04435 PF07549 SecD/SecF GG Motif COG34_RS04435 PF02355 Protein export membrane protein COG34_RS04440 PF07549 SecD/SecF GG Motif COG34_RS04440 PF02355 Protein export membrane protein COG34_RS04440 PF13721 SecD export protein N-terminal TM region COG34_RS04445 PF02699 Preprotein translocase subunit COG34_RS04450 PF01702 Queuine tRNA-ribosyltransferase COG34_RS04455 PF02547 Queuosine biosynthesis protein COG34_RS04460 PF04336 Acyl carrier protein phosphodiesterase COG34_RS04465 PF02903 Alpha amylase, N-terminal ig-like domain COG34_RS04465 PF00128 Alpha amylase, catalytic domain COG34_RS04470 PF00324 Amino acid permease COG34_RS04475 PF05525 Branched-chain amino acid transport protein COG34_RS04480 PF00989 PAS fold COG34_RS04480 PF11808 Phosphate regulon sensor protein PhoR COG34_RS04480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS04480 PF00512 His Kinase A (phospho-acceptor) domain COG34_RS04485 PF00486 Transcriptional regulatory protein, C terminal COG34_RS04485 PF00072 Response regulator receiver domain COG34_RS04490 PF00149 Calcineurin-like phosphoesterase COG34_RS04490 PF12320 Type 5 capsule protein repressor C-terminal domain COG34_RS04495 PF13476 AAA domain COG34_RS04500 PF07690 Major Facilitator Superfamily COG34_RS04505 PF00480 ROK family COG34_RS04510 PF04381 Putative exonuclease, RdgC COG34_RS04520 PF06865 Pyrimidine/purine nucleoside phosphorylase COG34_RS04525 PF07302 AroM protein COG34_RS04535 PF16362 YaiA protein COG34_RS04540 PF01202 Shikimate kinase COG34_RS04545 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 COG34_RS04550 PF03807 NADP oxidoreductase coenzyme F420-dependent COG34_RS04550 PF14748 Pyrroline-5-carboxylate reductase dimerisation COG34_RS04555 PF00990 Diguanylate cyclase, GGDEF domain COG34_RS04555 PF05230 MASE2 domain COG34_RS04560 PF07769 psiF repeat COG34_RS04565 PF00245 Alkaline phosphatase COG34_RS04570 PF10796 Sigma-S stabilisation anti-adaptor protein COG34_RS04580 PF01820 D-ala D-ala ligase N-terminus COG34_RS04580 PF07478 D-ala D-ala ligase C-terminus COG34_RS04585 PF10953 Protein of unknown function (DUF2754) COG34_RS04590 PF10954 Protein of unknown function (DUF2755) COG34_RS04595 PF07759 Protein of unknown function (DUF1615) COG34_RS04600 PF05992 SbmA/BacA-like family COG34_RS04610 PF00144 Beta-lactamase COG34_RS04615 PF15977 Winged helix-turn-helix DNA binding COG34_RS04640 PF00490 Delta-aminolevulinic acid dehydratase COG34_RS04645 PF02668 Taurine catabolism dioxygenase TauD, TfdA family COG34_RS04650 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS04655 PF00005 ABC transporter COG34_RS04660 PF04069 Substrate binding domain of ABC-type glycine betaine transport system COG34_RS04670 PF02585 GlcNAc-PI de-N-acetylase COG34_RS04675 PF00535 Glycosyl transferase family 2 COG34_RS04680 PF00132 Bacterial transferase hexapeptide (six repeats) COG34_RS04690 PF02583 Metal-sensitive transcriptional repressor COG34_RS04695 PF08240 Alcohol dehydrogenase GroES-like domain COG34_RS04695 PF00107 Zinc-binding dehydrogenase COG34_RS04700 PF00756 Putative esterase COG34_RS04705 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) COG34_RS04710 PF07690 Major Facilitator Superfamily COG34_RS04715 PF07836 DmpG-like communication domain COG34_RS04715 PF00682 HMGL-like COG34_RS04720 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation COG34_RS04720 PF01118 Semialdehyde dehydrogenase, NAD binding domain COG34_RS04725 PF01557 Fumarylacetoacetate (FAA) hydrolase family COG34_RS04730 PF12697 Alpha/beta hydrolase family COG34_RS04735 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase COG34_RS04740 PF01494 FAD binding domain COG34_RS04745 PF01614 Bacterial transcriptional regulator COG34_RS04745 PF09339 IclR helix-turn-helix domain COG34_RS04750 PF00356 Bacterial regulatory proteins, lacI family COG34_RS04760 PF02837 Glycosyl hydrolases family 2, sugar binding domain COG34_RS04760 PF02929 Beta galactosidase small chain COG34_RS04760 PF02836 Glycosyl hydrolases family 2, TIM barrel domain COG34_RS04760 PF16353 Domain of unknown function(DUF4981) COG34_RS04760 PF00703 Glycosyl hydrolases family 2 COG34_RS04765 PF01306 LacY proton/sugar symporter COG34_RS04770 PF00132 Bacterial transferase hexapeptide (six repeats) COG34_RS04770 PF12464 Maltose acetyltransferase COG34_RS04775 PF07690 Major Facilitator Superfamily COG34_RS04780 PF02560 Cyanate lyase C-terminal domain COG34_RS04785 PF00484 Carbonic anhydrase COG34_RS04790 PF03466 LysR substrate binding domain COG34_RS04790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS04795 PF07969 Amidohydrolase family COG34_RS04800 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin COG34_RS04805 PF16177 Acetyl-coenzyme A synthetase N-terminus COG34_RS04805 PF00501 AMP-binding enzyme COG34_RS04805 PF13193 AMP-binding enzyme C-terminal domain COG34_RS04810 PF03972 MmgE/PrpD family COG34_RS04815 PF00285 Citrate synthase, C-terminal domain COG34_RS04825 PF00158 Sigma-54 interaction domain COG34_RS04825 PF06506 Propionate catabolism activator COG34_RS04825 PF02954 Bacterial regulatory protein, Fis family COG34_RS04830 PF07338 Protein of unknown function (DUF1471) COG34_RS04835 PF01810 LysE type translocator COG34_RS04850 PF08240 Alcohol dehydrogenase GroES-like domain COG34_RS04850 PF00107 Zinc-binding dehydrogenase COG34_RS04855 PF02653 Branched-chain amino acid transport system / permease component COG34_RS04860 PF02653 Branched-chain amino acid transport system / permease component COG34_RS04865 PF00005 ABC transporter COG34_RS04870 PF13407 Periplasmic binding protein domain COG34_RS04880 PF07969 Amidohydrolase family COG34_RS04885 PF00696 Amino acid kinase family COG34_RS04890 PF06545 Protein of unknown function (DUF1116) COG34_RS04895 PF00549 CoA-ligase COG34_RS04895 PF02629 CoA binding domain COG34_RS04900 PF11392 Protein of unknown function (DUF2877) COG34_RS04905 PF12796 Ankyrin repeats (3 copies) COG34_RS04920 PF03466 LysR substrate binding domain COG34_RS04920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS04925 PF00196 Bacterial regulatory proteins, luxR family COG34_RS04925 PF00563 EAL domain COG34_RS04930 PF03797 Autotransporter beta-domain COG34_RS04935 PF02028 BCCT, betaine/carnitine/choline family transporter COG34_RS04945 PF00440 Bacterial regulatory proteins, tetR family COG34_RS04945 PF13977 BetI-type transcriptional repressor, C-terminal COG34_RS04950 PF00171 Aldehyde dehydrogenase family COG34_RS04955 PF00732 GMC oxidoreductase COG34_RS04955 PF05199 GMC oxidoreductase COG34_RS04965 PF00589 Phage integrase family COG34_RS04970 PF00563 EAL domain COG34_RS04970 PF00196 Bacterial regulatory proteins, luxR family COG34_RS04985 PF03797 Autotransporter beta-domain COG34_RS04985 PF03212 Pertactin COG34_RS05005 PF02589 LUD domain COG34_RS05010 PF11870 Domain of unknown function (DUF3390) COG34_RS05010 PF02589 LUD domain COG34_RS05010 PF13183 4Fe-4S dicluster domain COG34_RS05015 PF02754 Cysteine-rich domain COG34_RS05020 PF12833 Helix-turn-helix domain COG34_RS05020 PF12852 Cupin COG34_RS05025 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain COG34_RS05025 PF07992 Pyridine nucleotide-disulphide oxidoreductase COG34_RS05030 PF07338 Protein of unknown function (DUF1471) COG34_RS05035 PF04224 Protein of unknown function, DUF417 COG34_RS05040 PF00248 Aldo/keto reductase family COG34_RS05045 PF12833 Helix-turn-helix domain COG34_RS05050 PF11924 Inverse autotransporter, beta-domain COG34_RS05070 PF01197 Ribosomal protein L31 COG34_RS05075 PF00444 Ribosomal protein L36 COG34_RS05090 PF00196 Bacterial regulatory proteins, luxR family COG34_RS05095 PF16449 Fimbrillin MatB COG34_RS05100 PF18649 EcpB C-terminal domain COG34_RS05105 PF15976 CS1-pili formation C-terminal COG34_RS05105 PF16967 E-set like domain COG34_RS05120 PF03692 Putative zinc- or iron-chelating domain COG34_RS05130 PF07274 Protein of unknown function (DUF1440) COG34_RS05140 PF00111 2Fe-2S iron-sulfur cluster binding domain COG34_RS05140 PF01799 [2Fe-2S] binding domain COG34_RS05145 PF03450 CO dehydrogenase flavoprotein C-terminal domain COG34_RS05145 PF00941 FAD binding domain in molybdopterin dehydrogenase COG34_RS05150 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain COG34_RS05150 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase COG34_RS05155 PF02625 XdhC and CoxI family COG34_RS05155 PF13478 XdhC Rossmann domain COG34_RS05160 PF03466 LysR substrate binding domain COG34_RS05175 PF01381 Helix-turn-helix COG34_RS05185 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) COG34_RS05220 PF13166 AAA domain COG34_RS05240 PF12833 Helix-turn-helix domain COG34_RS05255 PF00239 Resolvase, N terminal domain COG34_RS05255 PF02796 Helix-turn-helix domain of resolvase COG34_RS05280 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) COG34_RS05285 PF04865 Baseplate J-like protein COG34_RS05335 PF17482 Phage tail sheath C-terminal domain COG34_RS05335 PF04984 Phage tail sheath protein subtilisin-like domain COG34_RS05380 PF04860 Phage portal protein COG34_RS05390 PF03354 Phage Terminase COG34_RS05425 PF00149 Calcineurin-like phosphoesterase COG34_RS05440 PF06147 Protein of unknown function (DUF968) COG34_RS05450 PF05866 Endodeoxyribonuclease RusA COG34_RS05455 PF00717 Peptidase S24-like COG34_RS05455 PF01726 LexA DNA binding domain COG34_RS05460 PF05869 DNA N-6-adenine-methyltransferase (Dam) COG34_RS05465 PF06069 PerC transcriptional activator COG34_RS05485 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT COG34_RS05490 PF00717 Peptidase S24-like COG34_RS05515 PF10065 Uncharacterized conserved protein (DUF2303) COG34_RS05545 PF00589 Phage integrase family COG34_RS05555 PF00171 Aldehyde dehydrogenase family COG34_RS05560 PF01472 PUA domain COG34_RS05560 PF00696 Amino acid kinase family COG34_RS05565 PF00267 Gram-negative porin COG34_RS05570 PF07417 Sigma factor-binding transcriptional regulator Crl COG34_RS05575 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) COG34_RS05580 PF00156 Phosphoribosyl transferase domain COG34_RS05585 PF07687 Peptidase dimerisation domain COG34_RS05585 PF01546 Peptidase family M20/M25/M40 COG34_RS05590 PF00472 RF-1 domain COG34_RS05605 PF13673 Acetyltransferase (GNAT) domain COG34_RS05610 PF11798 IMS family HHH motif COG34_RS05610 PF00817 impB/mucB/samB family COG34_RS05610 PF11799 impB/mucB/samB family C-terminal domain COG34_RS05615 PF00691 OmpA family COG34_RS05615 PF13677 Membrane MotB of proton-channel complex MotA/MotB COG34_RS05620 PF00771 FHIPEP family COG34_RS05635 PF00877 NlpC/P60 family COG34_RS05640 PF04221 RelB antitoxin COG34_RS05645 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ COG34_RS05650 PF03734 L,D-transpeptidase catalytic domain COG34_RS05655 PF13230 Glutamine amidotransferases class-II COG34_RS05660 PF13580 SIS domain COG34_RS05665 PF09317 Domain of unknown function (DUF1974) COG34_RS05665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain COG34_RS05665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain COG34_RS05665 PF02770 Acyl-CoA dehydrogenase, middle domain COG34_RS05675 PF00795 Carbon-nitrogen hydrolase COG34_RS05715 PF04717 Type VI secretion system, phage-baseplate injector COG34_RS05725 PF05638 Type VI secretion system effector, Hcp COG34_RS05740 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath COG34_RS05750 PF05947 Type VI secretion system, TssF COG34_RS05770 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE COG34_RS05780 PF10431 C-terminal, D2-small domain, of ClpB protein COG34_RS05780 PF07724 AAA domain (Cdc48 subfamily) COG34_RS05780 PF17871 AAA lid domain COG34_RS05780 PF00004 ATPase family associated with various cellular activities (AAA) COG34_RS05795 PF06761 Intracellular multiplication and human macrophage-killing COG34_RS05795 PF14331 ImcF-related N-terminal domain COG34_RS05795 PF06744 Type VI secretion protein IcmF C-terminal COG34_RS05805 PF05638 Type VI secretion system effector, Hcp COG34_RS05835 PF00929 Exonuclease COG34_RS05840 PF00075 RNase H COG34_RS05845 PF08241 Methyltransferase domain COG34_RS05850 PF16123 Hydroxyacylglutathione hydrolase C-terminus COG34_RS05850 PF00753 Metallo-beta-lactamase superfamily COG34_RS05855 PF01464 Transglycosylase SLT domain COG34_RS05855 PF01476 LysM domain COG34_RS05860 PF08241 Methyltransferase domain COG34_RS05865 PF03372 Endonuclease/Exonuclease/phosphatase family COG34_RS05870 PF03466 LysR substrate binding domain COG34_RS05870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS05875 PF00248 Aldo/keto reductase family COG34_RS05915 PF00005 ABC transporter COG34_RS05915 PF09383 NIL domain COG34_RS05920 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS05925 PF03180 NLPA lipoprotein COG34_RS05930 PF16358 RcsF lipoprotein COG34_RS05935 PF01980 tRNA-methyltransferase O COG34_RS05935 PF18389 TrmO C-terminal domain COG34_RS05940 PF04073 Aminoacyl-tRNA editing domain COG34_RS05940 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) COG34_RS05940 PF03129 Anticodon binding domain COG34_RS05950 PF01548 Transposase COG34_RS05950 PF02371 Transposase IS116/IS110/IS902 family COG34_RS05960 PF04170 NlpE N-terminal domain COG34_RS05960 PF17185 NlpE C-terminal OB domain COG34_RS05965 PF00472 RF-1 domain COG34_RS05970 PF07152 YaeQ protein COG34_RS05975 PF06786 Uncharacterised protein family (UPF0253) COG34_RS05980 PF07073 Modulator of Rho-dependent transcription termination (ROF) COG34_RS05985 PF09179 TilS substrate binding domain COG34_RS05985 PF11734 TilS substrate C-terminal domain COG34_RS05985 PF01171 PP-loop family COG34_RS05990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily COG34_RS05995 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain COG34_RS05995 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain COG34_RS05995 PF01276 Orn/Lys/Arg decarboxylase, major domain COG34_RS06000 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit COG34_RS06005 PF17657 Bacterial DNA polymerase III alpha subunit finger domain COG34_RS06005 PF01336 OB-fold nucleic acid binding domain COG34_RS06005 PF14579 Helix-hairpin-helix motif COG34_RS06005 PF07733 Bacterial DNA polymerase III alpha NTPase domain COG34_RS06005 PF02811 PHP domain COG34_RS06010 PF01351 Ribonuclease HII COG34_RS06015 PF02684 Lipid-A-disaccharide synthetase COG34_RS06020 PF00132 Bacterial transferase hexapeptide (six repeats) COG34_RS06020 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 COG34_RS06025 PF07977 FabA-like domain COG34_RS06030 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD COG34_RS06030 PF00132 Bacterial transferase hexapeptide (six repeats) COG34_RS06035 PF03938 Outer membrane protein (OmpH-like) COG34_RS06040 PF07244 Surface antigen variable number repeat COG34_RS06040 PF01103 Surface antigen COG34_RS06045 PF17820 PDZ domain COG34_RS06045 PF02163 Peptidase family M50 COG34_RS06055 PF01255 Putative undecaprenyl diphosphate synthase COG34_RS06060 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase COG34_RS06060 PF13288 DXP reductoisomerase C-terminal domain COG34_RS06060 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain COG34_RS06065 PF01765 Ribosome recycling factor COG34_RS06070 PF00696 Amino acid kinase family COG34_RS06075 PF00889 Elongation factor TS COG34_RS06085 PF00318 Ribosomal protein S2 COG34_RS06095 PF00557 Metallopeptidase family M24 COG34_RS06100 PF01966 HD domain COG34_RS06100 PF01842 ACT domain COG34_RS06100 PF01909 Nucleotidyltransferase domain COG34_RS06100 PF08335 GlnD PII-uridylyltransferase COG34_RS06105 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal COG34_RS06105 PF14602 Hexapeptide repeat of succinyl-transferase COG34_RS06105 PF00132 Bacterial transferase hexapeptide (six repeats) COG34_RS06110 PF11944 Protein of unknown function (DUF3461) COG34_RS06115 PF05651 Putative sugar diacid recognition COG34_RS06115 PF17853 GGDEF-like domain COG34_RS06115 PF13556 PucR C-terminal helix-turn-helix domain COG34_RS06120 PF00595 PDZ domain COG34_RS06130 PF13286 Phosphohydrolase-associated domain COG34_RS06130 PF01966 HD domain COG34_RS06135 PF01048 Phosphorylase superfamily COG34_RS06140 PF01497 Periplasmic binding protein COG34_RS06145 PF03458 UPF0126 domain COG34_RS06150 PF01521 Iron-sulphur cluster biosynthesis COG34_RS06155 PF00654 Voltage gated chloride channel COG34_RS06160 PF00202 Aminotransferase class-III COG34_RS06165 PF01032 FecCD transport family COG34_RS06170 PF01497 Periplasmic binding protein COG34_RS06175 PF00005 ABC transporter COG34_RS06180 PF00593 TonB dependent receptor COG34_RS06180 PF07715 TonB-dependent Receptor Plug Domain COG34_RS06185 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal COG34_RS06185 PF00912 Transglycosylase COG34_RS06185 PF14814 Bifunctional transglycosylase second domain COG34_RS06185 PF00905 Penicillin binding protein transpeptidase domain COG34_RS06195 PF04408 Helicase associated domain (HA2) COG34_RS06195 PF08482 ATP-dependent helicase C-terminal COG34_RS06195 PF00270 DEAD/DEAH box helicase COG34_RS06195 PF00271 Helicase conserved C-terminal domain COG34_RS06200 PF02834 LigT like Phosphoesterase COG34_RS06205 PF03749 Sugar fermentation stimulation protein RE domain COG34_RS06205 PF17746 SfsA N-terminal OB domain COG34_RS06210 PF01258 Prokaryotic dksA/traR C4-type zinc finger COG34_RS06215 PF00749 tRNA synthetases class I (E and Q), catalytic domain COG34_RS06220 PF12626 Polymerase A arginine-rich C-terminus COG34_RS06220 PF12627 Probable RNA and SrmB- binding site of polymerase A COG34_RS06220 PF01743 Poly A polymerase head domain COG34_RS06225 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) COG34_RS06230 PF00419 Fimbrial protein COG34_RS06235 PF02753 Pili assembly chaperone PapD, C-terminal domain COG34_RS06235 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain COG34_RS06240 PF13953 PapC C-terminal domain COG34_RS06240 PF13954 PapC N-terminal domain COG34_RS06240 PF00577 Outer membrane usher protein COG34_RS06245 PF00419 Fimbrial protein COG34_RS06250 PF00419 Fimbrial protein COG34_RS06255 PF00419 Fimbrial protein COG34_RS06260 PF00419 Fimbrial protein COG34_RS06265 PF02548 Ketopantoate hydroxymethyltransferase COG34_RS06270 PF02569 Pantoate-beta-alanine ligase COG34_RS06275 PF04754 Putative transposase, YhgA-like COG34_RS06290 PF02261 Aspartate decarboxylase COG34_RS06295 PF01522 Polysaccharide deacetylase COG34_RS06300 PF03610 PTS system fructose IIA component COG34_RS06305 PF01061 ABC-2 type transporter COG34_RS06310 PF00005 ABC transporter COG34_RS06315 PF00484 Carbonic anhydrase COG34_RS06320 PF00156 Phosphoribosyl transferase domain COG34_RS06325 PF01011 PQQ enzyme repeat COG34_RS06330 PF01548 Transposase COG34_RS06330 PF02371 Transposase IS116/IS110/IS902 family COG34_RS06340 PF00394 Multicopper oxidase COG34_RS06340 PF07731 Multicopper oxidase COG34_RS06340 PF07732 Multicopper oxidase COG34_RS06345 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) COG34_RS06350 PF17284 Spermidine synthase tetramerisation domain COG34_RS06355 PF02675 S-adenosylmethionine decarboxylase COG34_RS06360 PF06062 Uncharacterised protein family (UPF0231) COG34_RS06365 PF11791 Aconitate B N-terminal domain COG34_RS06365 PF06434 Aconitate hydratase 2 N-terminus COG34_RS06365 PF00330 Aconitase family (aconitate hydratase) COG34_RS06375 PF11737 Protein of unknown function (DUF3300) COG34_RS06380 PF07992 Pyridine nucleotide-disulphide oxidoreductase COG34_RS06380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain COG34_RS06385 PF02817 e3 binding domain COG34_RS06385 PF00364 Biotin-requiring enzyme COG34_RS06385 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) COG34_RS06390 PF17831 Pyruvate dehydrogenase E1 component middle domain COG34_RS06390 PF00456 Transketolase, thiamine diphosphate binding domain COG34_RS06400 PF00392 Bacterial regulatory proteins, gntR family COG34_RS06400 PF07729 FCD domain COG34_RS06405 PF00324 Amino acid permease COG34_RS06410 PF17113 Regulatory signalling modulator protein AmpE COG34_RS06415 PF01510 N-acetylmuramoyl-L-alanine amidase COG34_RS06420 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain COG34_RS06420 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain COG34_RS06430 PF07963 Prokaryotic N-terminal methylation motif COG34_RS06435 PF00437 Type II/IV secretion system protein COG34_RS06435 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain COG34_RS06440 PF00482 Type II secretion system (T2SS), protein F COG34_RS06445 PF00478 IMP dehydrogenase / GMP reductase domain COG34_RS06450 PF01121 Dephospho-CoA kinase COG34_RS06455 PF07072 Cell division protein COG34_RS06460 PF03884 DNA gyrase inhibitor YacG COG34_RS06465 PF00293 NUDIX domain COG34_RS06470 PF02810 SEC-C motif COG34_RS06470 PF07517 SecA DEAD-like domain COG34_RS06470 PF07516 SecA Wing and Scaffold domain COG34_RS06470 PF01043 SecA preprotein cross-linking domain COG34_RS06475 PF06558 Secretion monitor precursor protein (SecM) COG34_RS06480 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase COG34_RS06485 PF12327 FtsZ family, C-terminal domain COG34_RS06485 PF00091 Tubulin/FtsZ family, GTPase domain COG34_RS06490 PF02491 SHS2 domain inserted in FTSA COG34_RS06495 PF03799 Cell division protein FtsQ COG34_RS06495 PF08478 POTRA domain, FtsQ-type COG34_RS06500 PF07478 D-ala D-ala ligase C-terminus COG34_RS06500 PF01820 D-ala D-ala ligase N-terminus COG34_RS06505 PF08245 Mur ligase middle domain COG34_RS06505 PF01225 Mur ligase family, catalytic domain COG34_RS06505 PF02875 Mur ligase family, glutamate ligase domain COG34_RS06510 PF03033 Glycosyltransferase family 28 N-terminal domain COG34_RS06510 PF04101 Glycosyltransferase family 28 C-terminal domain COG34_RS06515 PF01098 Cell cycle protein COG34_RS06520 PF02875 Mur ligase family, glutamate ligase domain COG34_RS06520 PF08245 Mur ligase middle domain COG34_RS06525 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 COG34_RS06525 PF00953 Glycosyl transferase family 4 COG34_RS06530 PF02875 Mur ligase family, glutamate ligase domain COG34_RS06530 PF08245 Mur ligase middle domain COG34_RS06530 PF01225 Mur ligase family, catalytic domain COG34_RS06535 PF01225 Mur ligase family, catalytic domain COG34_RS06535 PF02875 Mur ligase family, glutamate ligase domain COG34_RS06535 PF08245 Mur ligase middle domain COG34_RS06540 PF00905 Penicillin binding protein transpeptidase domain COG34_RS06540 PF03717 Penicillin-binding Protein dimerisation domain COG34_RS06545 PF04999 Cell division protein FtsL COG34_RS06550 PF01795 MraW methylase family COG34_RS06555 PF02381 MraZ protein, putative antitoxin-like COG34_RS06570 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family COG34_RS06570 PF00356 Bacterial regulatory proteins, lacI family COG34_RS06580 PF10369 Small subunit of acetolactate synthase COG34_RS06585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain COG34_RS06585 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain COG34_RS06585 PF00205 Thiamine pyrophosphate enzyme, central domain COG34_RS06590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS06590 PF03466 LysR substrate binding domain COG34_RS06595 PF08054 Leucine operon leader peptide COG34_RS06600 PF08502 LeuA allosteric (dimerisation) domain COG34_RS06600 PF00682 HMGL-like COG34_RS06605 PF00180 Isocitrate/isopropylmalate dehydrogenase COG34_RS06610 PF00330 Aconitase family (aconitate hydratase) COG34_RS06615 PF00694 Aconitase C-terminal domain COG34_RS06620 PF07690 Major Facilitator Superfamily COG34_RS06630 PF12793 Sugar transport-related sRNA regulator N-term COG34_RS06630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle COG34_RS06640 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS06645 PF00005 ABC transporter COG34_RS06650 PF09335 SNARE associated Golgi protein COG34_RS06655 PF12833 Helix-turn-helix domain COG34_RS06655 PF02311 AraC-like ligand binding domain COG34_RS06665 PF02782 FGGY family of carbohydrate kinases, C-terminal domain COG34_RS06670 PF02610 L-arabinose isomerase COG34_RS06670 PF11762 L-arabinose isomerase C-terminal domain COG34_RS06675 PF00596 Class II Aldolase and Adducin N-terminal domain COG34_RS06680 PF00136 DNA polymerase family B COG34_RS06680 PF03104 DNA polymerase family B, exonuclease domain COG34_RS06685 PF00176 SNF2 family N-terminal domain COG34_RS06685 PF12137 RNA polymerase recycling family C-terminal COG34_RS06685 PF18339 RapA N-terminal Tudor like domain 1 COG34_RS06685 PF18337 RapA N-terminal Tudor like domain COG34_RS06685 PF00271 Helicase conserved C-terminal domain COG34_RS06690 PF00849 RNA pseudouridylate synthase COG34_RS06695 PF00226 DnaJ domain COG34_RS06695 PF05099 Tellurite resistance protein TerB COG34_RS06700 PF03968 OstA-like protein COG34_RS06700 PF04453 LPS transport system D COG34_RS06705 PF00639 PPIC-type PPIASE domain COG34_RS06705 PF09312 SurA N-terminal domain COG34_RS06710 PF04166 Pyridoxal phosphate biosynthetic protein PdxA COG34_RS06715 PF00398 Ribosomal RNA adenine dimethylase COG34_RS06720 PF04379 ApaG domain COG34_RS06725 PF00149 Calcineurin-like phosphoesterase COG34_RS06730 PF00186 Dihydrofolate reductase COG34_RS06735 PF02254 TrkA-N domain COG34_RS06735 PF00999 Sodium/hydrogen exchanger family COG34_RS06740 PF02525 Flavodoxin-like fold COG34_RS06745 PF00083 Sugar (and other) transporter COG34_RS06755 PF01494 FAD binding domain COG34_RS06760 PF01012 Electron transfer flavoprotein domain COG34_RS06760 PF00766 Electron transfer flavoprotein FAD-binding domain COG34_RS06765 PF01012 Electron transfer flavoprotein domain COG34_RS06770 PF02028 BCCT, betaine/carnitine/choline family transporter COG34_RS06775 PF02770 Acyl-CoA dehydrogenase, middle domain COG34_RS06775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain COG34_RS06775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain COG34_RS06780 PF02515 CoA-transferase family III COG34_RS06785 PF00501 AMP-binding enzyme COG34_RS06785 PF13193 AMP-binding enzyme C-terminal domain COG34_RS06790 PF00378 Enoyl-CoA hydratase/isomerase COG34_RS06795 PF00132 Bacterial transferase hexapeptide (six repeats) COG34_RS06800 PF07180 CaiF/GrlA transcriptional regulator COG34_RS06810 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain COG34_RS06810 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain COG34_RS06810 PF02142 MGS-like domain COG34_RS06815 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain COG34_RS06815 PF00117 Glutamine amidotransferase class-I COG34_RS06825 PF01113 Dihydrodipicolinate reductase, N-terminus COG34_RS06825 PF05173 Dihydrodipicolinate reductase, C-terminus COG34_RS06830 PF01156 Inosine-uridine preferring nucleoside hydrolase COG34_RS06835 PF02401 LytB protein COG34_RS06840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase COG34_RS06845 PF01252 Signal peptidase (SPase) II COG34_RS06850 PF08264 Anticodon-binding domain of tRNA COG34_RS06850 PF00133 tRNA synthetases class I (I, L, M and V) COG34_RS06850 PF06827 Zinc finger found in FPG and IleRS COG34_RS06855 PF06574 FAD synthetase COG34_RS06855 PF01687 Riboflavin kinase COG34_RS06860 PF10837 Protein of unknown function (DUF2575) COG34_RS06865 PF01649 Ribosomal protein S20 COG34_RS06890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS06890 PF03466 LysR substrate binding domain COG34_RS06895 PF06965 Na+/H+ antiporter 1 COG34_RS06900 PF01848 Hok/gef family COG34_RS06905 PF00684 DnaJ central domain COG34_RS06905 PF00226 DnaJ domain COG34_RS06905 PF01556 DnaJ C terminal domain COG34_RS06910 PF00012 Hsp70 protein COG34_RS06915 PF10807 Protein of unknown function (DUF2541) COG34_RS06920 PF13099 Domain of unknown function (DUF3944) COG34_RS06920 PF03981 Ubiquinol-cytochrome C chaperone COG34_RS06925 PF01184 GPR1/FUN34/yaaH family COG34_RS06930 PF00994 Probable molybdopterin binding domain COG34_RS06935 PF00923 Transaldolase/Fructose-6-phosphate aldolase COG34_RS06940 PF01235 Sodium:alanine symporter family COG34_RS06945 PF03883 Peroxide stress protein YaaA COG34_RS06950 PF02371 Transposase IS116/IS110/IS902 family COG34_RS06950 PF01548 Transposase COG34_RS06960 PF10697 Protein of unknown function (DUF2502) COG34_RS06965 PF00291 Pyridoxal-phosphate dependent enzyme COG34_RS06965 PF14821 Threonine synthase N terminus COG34_RS06970 PF08544 GHMP kinases C terminal COG34_RS06970 PF00288 GHMP kinases N terminal domain COG34_RS06975 PF03447 Homoserine dehydrogenase, NAD binding domain COG34_RS06975 PF00742 Homoserine dehydrogenase COG34_RS06975 PF13840 ACT domain COG34_RS06975 PF00696 Amino acid kinase family COG34_RS06975 PF01842 ACT domain COG34_RS06980 PF08254 Threonine leader peptide COG34_RS06985 PF00588 SpoU rRNA Methylase family COG34_RS06995 PF00486 Transcriptional regulatory protein, C terminal COG34_RS06995 PF00072 Response regulator receiver domain COG34_RS07000 PF06123 Inner membrane protein CreD COG34_RS07005 PF00672 HAMP domain COG34_RS07005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS07005 PF00512 His Kinase A (phospho-acceptor) domain COG34_RS07010 PF00486 Transcriptional regulatory protein, C terminal COG34_RS07010 PF00072 Response regulator receiver domain COG34_RS07015 PF05981 CreA protein COG34_RS07020 PF12833 Helix-turn-helix domain COG34_RS07020 PF06445 GyrI-like small molecule binding domain COG34_RS07025 PF00300 Histidine phosphatase superfamily (branch 1) COG34_RS07030 PF01931 Protein of unknown function DUF84 COG34_RS07035 PF01371 Trp repressor protein COG34_RS07040 PF14718 Soluble lytic murein transglycosylase L domain COG34_RS07040 PF01464 Transglycosylase SLT domain COG34_RS07050 PF00005 ABC transporter COG34_RS07050 PF12848 ABC transporter COG34_RS07055 PF01381 Helix-turn-helix COG34_RS07055 PF13521 AAA domain COG34_RS07060 PF18073 Rubredoxin metal binding domain COG34_RS07065 PF18429 Domain of unknown function (DUF5609) COG34_RS07070 PF10144 Bacterial virulence factor haemolysin COG34_RS07075 PF10437 Bacterial lipoate protein ligase C-terminus COG34_RS07075 PF03099 Biotin/lipoate A/B protein ligase family COG34_RS07085 PF01048 Phosphorylase superfamily COG34_RS07090 PF01676 Metalloenzyme superfamily COG34_RS07095 PF02885 Glycosyl transferase family, helical bundle domain COG34_RS07095 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain COG34_RS07095 PF00591 Glycosyl transferase family, a/b domain COG34_RS07100 PF01791 DeoC/LacD family aldolase COG34_RS07105 PF11230 Protein of unknown function (DUF3029) COG34_RS07110 PF04055 Radical SAM superfamily COG34_RS07115 PF01026 TatD related DNase COG34_RS07120 PF01734 Patatin-like phospholipase COG34_RS07125 PF07043 Protein of unknown function (DUF1328) COG34_RS07130 PF04972 BON domain COG34_RS07135 PF00009 Elongation factor Tu GTP binding domain COG34_RS07135 PF16658 Class II release factor RF3, C-terminal domain COG34_RS07135 PF03144 Elongation factor Tu domain 2 COG34_RS07140 PF13419 Haloacid dehalogenase-like hydrolase COG34_RS07145 PF00583 Acetyltransferase (GNAT) family COG34_RS07150 PF03603 DNA polymerase III psi subunit COG34_RS07155 PF05175 Methyltransferase small domain COG34_RS07155 PF08468 Methyltransferase small domain N-terminal COG34_RS07175 PF07256 Protein of unknown function (DUF1435) COG34_RS07180 PF06276 Ferric iron reductase FhuF-like transporter COG34_RS07180 PF11575 FhuF 2Fe-2S C-terminal domain COG34_RS07185 PF00196 Bacterial regulatory proteins, luxR family COG34_RS07190 PF00196 Bacterial regulatory proteins, luxR family COG34_RS07195 PF06738 Putative threonine/serine exporter COG34_RS07200 PF12821 Threonine/Serine exporter, ThrE COG34_RS07205 PF17948 DnaT DNA-binding domain COG34_RS07210 PF01695 IstB-like ATP binding protein COG34_RS07215 PF10696 Protein of unknown function (DUF2501) COG34_RS07220 PF00884 Sulfatase COG34_RS07225 PF00107 Zinc-binding dehydrogenase COG34_RS07225 PF08240 Alcohol dehydrogenase GroES-like domain COG34_RS07230 PF00392 Bacterial regulatory proteins, gntR family COG34_RS07230 PF07729 FCD domain COG34_RS07235 PF07690 Major Facilitator Superfamily COG34_RS07240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain COG34_RS07240 PF02203 Tar ligand binding domain homologue COG34_RS07240 PF00672 HAMP domain COG34_RS07250 PF13722 5TM C-terminal transporter carbon starvation CstA COG34_RS07250 PF02554 Carbon starvation protein CstA COG34_RS07255 PF04328 Selenoprotein, putative COG34_RS07260 PF07683 Cobalamin synthesis protein cobW C-terminal domain COG34_RS07260 PF02492 CobW/HypB/UreG, nucleotide-binding domain COG34_RS07275 PF04471 Restriction endonuclease COG34_RS07275 PF14338 Mrr N-terminal domain COG34_RS07280 PF02384 N-6 DNA Methylase COG34_RS07285 PF01420 Type I restriction modification DNA specificity domain COG34_RS07290 PF11867 Domain of unknown function (DUF3387) COG34_RS07290 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) COG34_RS07290 PF18766 SWI2/SNF2 ATPase COG34_RS07295 PF08845 Toxin SymE, type I toxin-antitoxin system COG34_RS07300 PF06568 Domain of unknown function (DUF1127) COG34_RS07305 PF00155 Aminotransferase class I and II COG34_RS07305 PF00392 Bacterial regulatory proteins, gntR family COG34_RS07310 PF04754 Putative transposase, YhgA-like COG34_RS07325 PF07690 Major Facilitator Superfamily COG34_RS07335 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component COG34_RS07340 PF01869 BadF/BadG/BcrA/BcrD ATPase family COG34_RS07345 PF11823 Protein of unknown function (DUF3343) COG34_RS07350 PF06977 SdiA-regulated COG34_RS07355 PF06779 Uncharacterised MFS-type transporter YbfB COG34_RS07360 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family COG34_RS07365 PF07670 Nucleoside recognition COG34_RS07370 PF07670 Nucleoside recognition COG34_RS07375 PF01979 Amidohydrolase family COG34_RS07380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS07380 PF03466 LysR substrate binding domain COG34_RS07385 PF04965 Gene 25-like lysozyme COG34_RS07400 PF00392 Bacterial regulatory proteins, gntR family COG34_RS07400 PF07729 FCD domain COG34_RS07410 PF08125 Mannitol dehydrogenase C-terminal domain COG34_RS07410 PF01232 Mannitol dehydrogenase Rossmann domain COG34_RS07415 PF03786 D-mannonate dehydratase (UxuA) COG34_RS07425 PF02447 GntP family permease COG34_RS07465 PF05717 IS66 Orf2 like protein COG34_RS07470 PF03050 Transposase IS66 family COG34_RS07470 PF13817 IS66 C-terminal element COG34_RS07470 PF13007 Transposase C of IS166 homeodomain COG34_RS07470 PF13005 zinc-finger binding domain of transposase IS66 COG34_RS07490 PF13737 Transposase DDE domain COG34_RS07510 PF08281 Sigma-70, region 4 COG34_RS07510 PF04542 Sigma-70 region 2 COG34_RS07515 PF04773 FecR protein COG34_RS07515 PF16220 Domain of unknown function (DUF4880) COG34_RS07520 PF07715 TonB-dependent Receptor Plug Domain COG34_RS07520 PF07660 Secretin and TonB N terminus short domain COG34_RS07520 PF00593 TonB dependent receptor COG34_RS07525 PF01497 Periplasmic binding protein COG34_RS07530 PF01032 FecCD transport family COG34_RS07535 PF01032 FecCD transport family COG34_RS07540 PF00005 ABC transporter COG34_RS07555 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) COG34_RS07570 PF01522 Polysaccharide deacetylase COG34_RS07575 PF13439 Glycosyltransferase Family 4 COG34_RS07575 PF00534 Glycosyl transferases group 1 COG34_RS07580 PF04393 Protein of unknown function (DUF535) COG34_RS07585 PF03279 Bacterial lipid A biosynthesis acyltransferase COG34_RS07590 PF13333 Integrase core domain COG34_RS07590 PF00665 Integrase core domain COG34_RS07590 PF13276 HTH-like domain COG34_RS07595 PF02028 BCCT, betaine/carnitine/choline family transporter COG34_RS07605 PF10011 Predicted membrane protein (DUF2254) COG34_RS07610 PF00440 Bacterial regulatory proteins, tetR family COG34_RS07610 PF16925 Tetracyclin repressor-like, C-terminal domain COG34_RS07620 PF08240 Alcohol dehydrogenase GroES-like domain COG34_RS07620 PF00107 Zinc-binding dehydrogenase COG34_RS07640 PF01842 ACT domain COG34_RS07660 PF02661 Fic/DOC family COG34_RS07660 PF13784 Fic/DOC family N-terminal COG34_RS07675 PF13358 DDE superfamily endonuclease COG34_RS07685 PF00145 C-5 cytosine-specific DNA methylase COG34_RS07690 PF13755 Sensor N-terminal transmembrane domain COG34_RS07690 PF00512 His Kinase A (phospho-acceptor) domain COG34_RS07690 PF13756 Stimulus-sensing domain COG34_RS07690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS07690 PF00672 HAMP domain COG34_RS07710 PF18818 Metallopeptidase superfamily domain COG34_RS07710 PF08401 Domain of unknown function (DUF1738) COG34_RS07720 PF02899 Phage integrase, N-terminal SAM-like domain COG34_RS07720 PF00589 Phage integrase family COG34_RS07730 PF00107 Zinc-binding dehydrogenase COG34_RS07730 PF08240 Alcohol dehydrogenase GroES-like domain COG34_RS07735 PF01202 Shikimate kinase COG34_RS07740 PF00107 Zinc-binding dehydrogenase COG34_RS07740 PF08240 Alcohol dehydrogenase GroES-like domain COG34_RS07745 PF00106 short chain dehydrogenase COG34_RS07750 PF02447 GntP family permease COG34_RS07755 PF00356 Bacterial regulatory proteins, lacI family COG34_RS07760 PF05872 Bacterial protein of unknown function (DUF853) COG34_RS07765 PF03739 Lipopolysaccharide export system permease LptF/LptG COG34_RS07770 PF03739 Lipopolysaccharide export system permease LptF/LptG COG34_RS07775 PF02789 Cytosol aminopeptidase family, N-terminal domain COG34_RS07775 PF00883 Cytosol aminopeptidase family, catalytic domain COG34_RS07780 PF04364 DNA polymerase III chi subunit, HolC COG34_RS07785 PF08264 Anticodon-binding domain of tRNA COG34_RS07785 PF10458 Valyl tRNA synthetase tRNA binding arm COG34_RS07785 PF00133 tRNA synthetases class I (I, L, M and V) COG34_RS07790 PF05987 Bacterial protein of unknown function (DUF898) COG34_RS07795 PF00583 Acetyltransferase (GNAT) family COG34_RS07800 PF06877 Regulator of ribonuclease activity B COG34_RS07805 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain COG34_RS07805 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain COG34_RS07835 PF04074 YhcH/YjgK/YiaL COG34_RS07840 PF00440 Bacterial regulatory proteins, tetR family COG34_RS07850 PF01042 Endoribonuclease L-PSP COG34_RS07860 PF08052 PyrBI operon leader peptide COG34_RS07865 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain COG34_RS07865 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain COG34_RS07870 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain COG34_RS07870 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain COG34_RS07875 PF01042 Endoribonuclease L-PSP COG34_RS07885 PF00690 Cation transporter/ATPase, N-terminus COG34_RS07885 PF00689 Cation transporting ATPase, C-terminus COG34_RS07890 PF17059 MgtA leader peptide COG34_RS07895 PF00356 Bacterial regulatory proteins, lacI family COG34_RS07900 PF02378 Phosphotransferase system, EIIC COG34_RS07900 PF00367 phosphotransferase system, EIIB COG34_RS07905 PF11941 Domain of unknown function (DUF3459) COG34_RS07905 PF00128 Alpha amylase, catalytic domain COG34_RS07910 PF13597 Anaerobic ribonucleoside-triphosphate reductase COG34_RS07910 PF03477 ATP cone domain COG34_RS07920 PF07361 Cytochrome b562 COG34_RS07925 PF01523 Putative modulator of DNA gyrase COG34_RS07930 PF04751 Protein of unknown function (DUF615) COG34_RS07935 PF01225 Mur ligase family, catalytic domain COG34_RS07935 PF02875 Mur ligase family, glutamate ligase domain COG34_RS07935 PF08245 Mur ligase middle domain COG34_RS07940 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain COG34_RS07945 PF02653 Branched-chain amino acid transport system / permease component COG34_RS07950 PF02653 Branched-chain amino acid transport system / permease component COG34_RS07955 PF00005 ABC transporter COG34_RS07965 PF13407 Periplasmic binding protein domain COG34_RS07970 PF00719 Inorganic pyrophosphatase COG34_RS07975 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system COG34_RS07980 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin COG34_RS07985 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like COG34_RS07990 PF04357 TamB, inner membrane protein subunit of TAM complex COG34_RS07995 PF07244 Surface antigen variable number repeat COG34_RS07995 PF01103 Surface antigen COG34_RS07995 PF17243 POTRA domain TamA domain 1 COG34_RS08005 PF01625 Peptide methionine sulfoxide reductase COG34_RS08010 PF01595 Cyclin M transmembrane N-terminal domain COG34_RS08010 PF00571 CBS domain COG34_RS08010 PF03471 Transporter associated domain COG34_RS08015 PF06526 Protein of unknown function (DUF1107) COG34_RS08020 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) COG34_RS08025 PF00459 Inositol monophosphatase family COG34_RS08030 PF02872 5'-nucleotidase, C-terminal domain COG34_RS08030 PF00149 Calcineurin-like phosphoesterase COG34_RS08035 PF01638 HxlR-like helix-turn-helix COG34_RS08040 PF05368 NmrA-like family COG34_RS08045 PF00892 EamA-like transporter family COG34_RS08050 PF01814 Hemerythrin HHE cation binding domain COG34_RS08050 PF04405 Domain of Unknown function (DUF542) COG34_RS08055 PF00324 Amino acid permease COG34_RS08060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase COG34_RS08060 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase COG34_RS08065 PF08525 Opacity-associated protein A N-terminal motif COG34_RS08065 PF04225 Opacity-associated protein A LysM-like domain COG34_RS08070 PF17938 Tetracyclin repressor-like, C-terminal domain COG34_RS08085 PF00378 Enoyl-CoA hydratase/isomerase COG34_RS08090 PF01144 Coenzyme A transferase COG34_RS08095 PF00890 FAD binding domain COG34_RS08095 PF02910 Fumarate reductase flavoprotein C-term COG34_RS08105 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component COG34_RS08110 PF03480 Bacterial extracellular solute-binding protein, family 7 COG34_RS08115 PF03948 Ribosomal protein L9, C-terminal domain COG34_RS08115 PF01281 Ribosomal protein L9, N-terminal domain COG34_RS08120 PF01084 Ribosomal protein S18 COG34_RS08125 PF00436 Single-strand binding protein family COG34_RS08130 PF01250 Ribosomal protein S6 COG34_RS08135 PF07338 Protein of unknown function (DUF1471) COG34_RS08140 PF00596 Class II Aldolase and Adducin N-terminal domain COG34_RS08145 PF01261 Xylose isomerase-like TIM barrel COG34_RS08150 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family COG34_RS08155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 COG34_RS08160 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit COG34_RS08165 PF03611 PTS system sugar-specific permease component COG34_RS08175 PF00455 DeoR C terminal sensor domain COG34_RS08175 PF08220 DeoR-like helix-turn-helix domain COG34_RS08180 PF00326 Prolyl oligopeptidase family COG34_RS08185 PF07338 Protein of unknown function (DUF1471) COG34_RS08190 PF07338 Protein of unknown function (DUF1471) COG34_RS08195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain COG34_RS08195 PF18158 Adaptive response protein AidB N-terminal domain COG34_RS08195 PF02770 Acyl-CoA dehydrogenase, middle domain COG34_RS08200 PF03738 Glutathionylspermidine synthase preATP-grasp COG34_RS08205 PF06693 Protein of unknown function (DUF1190) COG34_RS08210 PF03994 Domain of Unknown Function (DUF350) COG34_RS08215 PF10679 Protein of unknown function (DUF2491) COG34_RS08220 PF04012 PspA/IM30 family COG34_RS08225 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) COG34_RS08235 PF08032 RNA 2'-O ribose methyltransferase substrate binding COG34_RS08235 PF00588 SpoU rRNA Methylase family COG34_RS08240 PF08461 Ribonuclease R winged-helix domain COG34_RS08240 PF00575 S1 RNA binding domain COG34_RS08240 PF08206 Ribonuclease B OB domain COG34_RS08240 PF17876 Cold shock domain COG34_RS08240 PF00773 RNB domain COG34_RS08245 PF02082 Transcriptional regulator COG34_RS08250 PF00709 Adenylosuccinate synthetase COG34_RS08255 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) COG34_RS08260 PF01145 SPFH domain / Band 7 family COG34_RS08265 PF12221 Bacterial membrane protein N terminal COG34_RS08265 PF01145 SPFH domain / Band 7 family COG34_RS08270 PF13167 GTP-binding GTPase N-terminal COG34_RS08270 PF01926 50S ribosome-binding GTPase COG34_RS08270 PF16360 GTP-binding GTPase Middle Region COG34_RS08275 PF17209 Hfq protein COG34_RS08285 PF01119 DNA mismatch repair protein, C-terminal domain COG34_RS08285 PF08676 MutL C terminal dimerisation domain COG34_RS08290 PF01520 N-acetylmuramoyl-L-alanine amidase COG34_RS08295 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE COG34_RS08300 PF03853 YjeF-related protein N-terminus COG34_RS08300 PF01256 Carbohydrate kinase COG34_RS08305 PF08331 Domain of unknown function (DUF1730) COG34_RS08325 PF00929 Exonuclease COG34_RS08335 PF03193 RsgA GTPase COG34_RS08340 PF02666 Phosphatidylserine decarboxylase COG34_RS08345 PF00924 Mechanosensitive ion channel COG34_RS08345 PF12794 Mechanosensitive ion channel inner membrane domain 1 COG34_RS08345 PF12795 Mechanosensitive ion channel porin domain COG34_RS08350 PF13520 Amino acid permease COG34_RS08355 PF00152 tRNA synthetases class II (D, K and N) COG34_RS08360 PF00890 FAD binding domain COG34_RS08360 PF02910 Fumarate reductase flavoprotein C-term COG34_RS08365 PF13183 4Fe-4S dicluster domain COG34_RS08365 PF13085 2Fe-2S iron-sulfur cluster binding domain COG34_RS08370 PF02300 Fumarate reductase subunit C COG34_RS08375 PF02313 Fumarate reductase subunit D COG34_RS08380 PF00144 Beta-lactamase COG34_RS08385 PF08212 Lipocalin-like domain COG34_RS08390 PF00893 Small Multidrug Resistance protein COG34_RS08395 PF08085 Entericidin EcnA/B family COG34_RS08400 PF08085 Entericidin EcnA/B family COG34_RS08405 PF09285 Elongation factor P, C-terminal COG34_RS08405 PF08207 Elongation factor P (EF-P) KOW-like domain COG34_RS08405 PF01132 Elongation factor P (EF-P) OB domain COG34_RS08410 PF04055 Radical SAM superfamily COG34_RS08415 PF15922 YjeJ-like COG34_RS08420 PF01548 Transposase COG34_RS08420 PF02371 Transposase IS116/IS110/IS902 family COG34_RS08430 PF13698 Domain of unknown function (DUF4156) COG34_RS08435 PF00118 TCP-1/cpn60 chaperonin family COG34_RS08440 PF00166 Chaperonin 10 Kd subunit COG34_RS08445 PF13520 Amino acid permease COG34_RS08450 PF04186 FxsA cytoplasmic membrane protein COG34_RS08455 PF10415 Fumarase C C-terminus COG34_RS08455 PF00206 Lyase COG34_RS08460 PF03605 Anaerobic c4-dicarboxylate membrane transporter COG34_RS08465 PF03091 CutA1 divalent ion tolerance protein COG34_RS08470 PF02683 Cytochrome C biogenesis protein transmembrane region COG34_RS08470 PF11412 Disulphide bond corrector protein DsbC COG34_RS08485 PF00589 Phage integrase family COG34_RS08485 PF14659 Phage integrase, N-terminal SAM-like domain COG34_RS08485 PF13356 Arm DNA-binding domain COG34_RS08495 PF00884 Sulfatase COG34_RS08530 PF13505 Outer membrane protein beta-barrel domain COG34_RS08535 PF00589 Phage integrase family COG34_RS08535 PF13356 Arm DNA-binding domain COG34_RS08540 PF13005 zinc-finger binding domain of transposase IS66 COG34_RS08540 PF13007 Transposase C of IS166 homeodomain COG34_RS08540 PF13817 IS66 C-terminal element COG34_RS08540 PF03050 Transposase IS66 family COG34_RS08545 PF05717 IS66 Orf2 like protein COG34_RS08605 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath COG34_RS08620 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) COG34_RS08710 PF01926 50S ribosome-binding GTPase COG34_RS08720 PF06006 Bacterial protein of unknown function (DUF905) COG34_RS08730 PF06067 Domain of unknown function (DUF932) COG34_RS08735 PF03230 Antirestriction protein COG34_RS08740 PF04002 RadC-like JAB domain COG34_RS08745 PF06174 Protein of unknown function (DUF987) COG34_RS08750 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A COG34_RS08755 PF06755 CbtA_toxin of type IV toxin-antitoxin system COG34_RS08785 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH COG34_RS08800 PF00486 Transcriptional regulatory protein, C terminal COG34_RS08800 PF18500 CadC C-terminal domain 1 COG34_RS08810 PF13520 Amino acid permease COG34_RS08815 PF01276 Orn/Lys/Arg decarboxylase, major domain COG34_RS08815 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain COG34_RS08815 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain COG34_RS08820 PF00854 POT family COG34_RS08825 PF00152 tRNA synthetases class II (D, K and N) COG34_RS08825 PF01336 OB-fold nucleic acid binding domain COG34_RS08830 PF10753 Toxin GhoT_OrtT COG34_RS08835 PF11080 Endoribonuclease GhoS COG34_RS08850 PF06902 Divergent 4Fe-4S mono-cluster COG34_RS08855 PF17203 Single cache domain 3 COG34_RS08855 PF00989 PAS fold COG34_RS08855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS08855 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain COG34_RS08860 PF00072 Response regulator receiver domain COG34_RS08870 PF03605 Anaerobic c4-dicarboxylate membrane transporter COG34_RS08875 PF05681 Fumarate hydratase (Fumerase) COG34_RS08875 PF05683 Fumarase C-terminus COG34_RS08880 PF09997 Predicted membrane protein (DUF2238) COG34_RS08895 PF11975 Family 4 glycosyl hydrolase C-terminal domain COG34_RS08895 PF02056 Family 4 glycosyl hydrolase COG34_RS08905 PF12833 Helix-turn-helix domain COG34_RS08910 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain COG34_RS08910 PF01276 Orn/Lys/Arg decarboxylase, major domain COG34_RS08910 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain COG34_RS08915 PF12833 Helix-turn-helix domain COG34_RS08920 PF13520 Amino acid permease COG34_RS08925 PF08019 Phosphoethanolamine transferase EptA/EptB COG34_RS08925 PF00884 Sulfatase COG34_RS08930 PF00486 Transcriptional regulatory protein, C terminal COG34_RS08930 PF00072 Response regulator receiver domain COG34_RS08935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS08935 PF00512 His Kinase A (phospho-acceptor) domain COG34_RS08945 PF00083 Sugar (and other) transporter COG34_RS08945 PF08946 Osmosensory transporter coiled coil COG34_RS08950 PF13990 YjcZ-like protein COG34_RS08955 PF00350 Dynamin family COG34_RS08965 PF03831 PhnA domain COG34_RS08965 PF08274 PhnA Zinc-Ribbon COG34_RS08970 PF06983 3-demethylubiquinone-9 3-methyltransferase COG34_RS08975 PF00005 ABC transporter COG34_RS08990 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS08995 PF00392 Bacterial regulatory proteins, gntR family COG34_RS08995 PF07702 UTRA domain COG34_RS09000 PF06754 Phosphonate metabolism protein PhnG COG34_RS09005 PF05845 Bacterial phosphonate metabolism protein (PhnH) COG34_RS09010 PF05861 Bacterial phosphonate metabolism protein (PhnI) COG34_RS09015 PF06007 Phosphonate metabolism protein PhnJ COG34_RS09020 PF00005 ABC transporter COG34_RS09025 PF00005 ABC transporter COG34_RS09030 PF07969 Amidohydrolase family COG34_RS09040 PF00583 Acetyltransferase (GNAT) family COG34_RS09045 PF12706 Beta-lactamase superfamily domain COG34_RS09055 PF02502 Ribose/Galactose Isomerase COG34_RS09060 PF14863 Alkyl sulfatase dimerisation COG34_RS09060 PF14864 Alkyl sulfatase C-terminal COG34_RS09060 PF00753 Metallo-beta-lactamase superfamily COG34_RS09065 PF17090 Uncharacterised protein family COG34_RS09070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion COG34_RS09070 PF00529 HlyD membrane-fusion protein of T1SS COG34_RS09075 PF04632 Fusaric acid resistance protein family COG34_RS09080 PF02321 Outer membrane efflux protein COG34_RS09090 PF08238 Sel1 repeat COG34_RS09095 PF00375 Sodium:dicarboxylate symporter family COG34_RS09110 PF03918 Cytochrome C biogenesis protein COG34_RS09115 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal COG34_RS09115 PF01578 Cytochrome C assembly protein COG34_RS09120 PF03916 Polysulphide reductase, NrfD COG34_RS09125 PF13247 4Fe-4S dicluster domain COG34_RS09125 PF00037 4Fe-4S binding domain COG34_RS09130 PF13435 Cytochrome c554 and c-prime COG34_RS09130 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) COG34_RS09135 PF02335 Cytochrome c552 COG34_RS09145 PF13193 AMP-binding enzyme C-terminal domain COG34_RS09145 PF00501 AMP-binding enzyme COG34_RS09145 PF16177 Acetyl-coenzyme A synthetase N-terminus COG34_RS09150 PF04341 Protein of unknown function, DUF485 COG34_RS09155 PF00474 Sodium:solute symporter family COG34_RS09160 PF00805 Pentapeptide repeats (8 copies) COG34_RS09165 PF00999 Sodium/hydrogen exchanger family COG34_RS09170 PF00860 Permease family COG34_RS09190 PF00376 MerR family regulatory protein COG34_RS09190 PF09278 MerR, DNA binding COG34_RS09195 PF12833 Helix-turn-helix domain COG34_RS09200 PF00563 EAL domain COG34_RS09200 PF12792 CSS motif domain associated with EAL COG34_RS09210 PF15940 Family of unknown function COG34_RS09215 PF00436 Single-strand binding protein family COG34_RS09220 PF17760 UvrA interaction domain COG34_RS09220 PF17755 UvrA DNA-binding domain COG34_RS09220 PF00005 ABC transporter COG34_RS09225 PF04237 YjbR COG34_RS09230 PF01894 Uncharacterised protein family UPF0047 COG34_RS09235 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) COG34_RS09245 PF00155 Aminotransferase class I and II COG34_RS09250 PF00842 Alanine racemase, C-terminal domain COG34_RS09250 PF01168 Alanine racemase, N-terminal domain COG34_RS09255 PF03796 DnaB-like helicase C terminal domain COG34_RS09255 PF00772 DnaB-like helicase N terminal domain COG34_RS09260 PF08240 Alcohol dehydrogenase GroES-like domain COG34_RS09260 PF00107 Zinc-binding dehydrogenase COG34_RS09265 PF09583 Phage shock protein G (Phageshock_PspG) COG34_RS09270 PF01207 Dihydrouridine synthase (Dus) COG34_RS09285 PF01475 Ferric uptake regulator family COG34_RS09290 PF05532 CsbD-like COG34_RS09295 PF01554 MatE COG34_RS09300 PF01726 LexA DNA binding domain COG34_RS09300 PF00717 Peptidase S24-like COG34_RS09305 PF01219 Prokaryotic diacylglycerol kinase COG34_RS09310 PF01553 Acyltransferase COG34_RS09315 PF01040 UbiA prenyltransferase family COG34_RS09320 PF04345 Chorismate lyase COG34_RS09330 PF13599 Pentapeptide repeats (9 copies) COG34_RS09330 PF13981 SopA-like central domain COG34_RS09340 PF07148 Maltose operon periplasmic protein precursor (MalM) COG34_RS09345 PF02264 LamB porin COG34_RS09350 PF00005 ABC transporter COG34_RS09350 PF17912 MalK OB fold domain COG34_RS09360 PF01547 Bacterial extracellular solute-binding protein COG34_RS09365 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS09365 PF14785 Maltose transport system permease protein MalF P2 domain COG34_RS09370 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS09375 PF00083 Sugar (and other) transporter COG34_RS09380 PF06146 Phosphate-starvation-inducible E COG34_RS09385 PF17089 Uncharacterised protein family COG34_RS09390 PF06082 Exopolysaccharide biosynthesis protein YbjH COG34_RS09395 PF06251 Capsule biosynthesis GfcC COG34_RS09400 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF COG34_RS09405 PF11106 Exopolysaccharide production protein YjbE COG34_RS09410 PF00342 Phosphoglucose isomerase COG34_RS09420 PF00696 Amino acid kinase family COG34_RS09420 PF01842 ACT domain COG34_RS09425 PF06414 Zeta toxin COG34_RS09430 PF10127 RNA repair pathway DNA polymerase beta family COG34_RS09440 PF11656 YjbD family (DUF3811) COG34_RS09445 PF00849 RNA pseudouridylate synthase COG34_RS09445 PF01479 S4 domain COG34_RS09450 PF03575 Peptidase family S51 COG34_RS09455 PF02690 Na+/Pi-cotransporter COG34_RS09460 PF02310 B12 binding domain COG34_RS09460 PF02965 Vitamin B12 dependent methionine synthase, activation domain COG34_RS09460 PF00809 Pterin binding enzyme COG34_RS09460 PF02574 Homocysteine S-methyltransferase COG34_RS09460 PF02607 B12 binding domain COG34_RS09465 PF01614 Bacterial transcriptional regulator COG34_RS09465 PF09339 IclR helix-turn-helix domain COG34_RS09470 PF07906 ShET2 enterotoxin, N-terminal region COG34_RS09475 PF07906 ShET2 enterotoxin, N-terminal region COG34_RS09480 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) COG34_RS09485 PF00463 Isocitrate lyase family COG34_RS09490 PF01274 Malate synthase COG34_RS09495 PF04204 Homoserine O-succinyltransferase COG34_RS09500 PF13673 Acetyltransferase (GNAT) domain COG34_RS09530 PF01808 AICARFT/IMPCHase bienzyme COG34_RS09530 PF02142 MGS-like domain COG34_RS09535 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain COG34_RS09535 PF02843 Phosphoribosylglycinamide synthetase, C domain COG34_RS09535 PF02844 Phosphoribosylglycinamide synthetase, N domain COG34_RS09540 PF02954 Bacterial regulatory protein, Fis family COG34_RS09540 PF00072 Response regulator receiver domain COG34_RS09540 PF00158 Sigma-54 interaction domain COG34_RS09545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS09545 PF00512 His Kinase A (phospho-acceptor) domain COG34_RS09555 PF13801 Heavy-metal resistance COG34_RS09560 PF07356 Protein of unknown function (DUF1481) COG34_RS09565 PF00216 Bacterial DNA-binding protein COG34_RS09570 PF04222 Protein of unknown function (DUF416) COG34_RS09575 PF04493 Endonuclease V COG34_RS09580 PF01208 Uroporphyrinogen decarboxylase (URO-D) COG34_RS09585 PF00293 NUDIX domain COG34_RS09585 PF09297 NADH pyrophosphatase zinc ribbon domain COG34_RS09590 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ COG34_RS09595 PF13667 ThiC-associated domain COG34_RS09595 PF01964 Radical SAM ThiC family COG34_RS09600 PF02581 Thiamine monophosphate synthase COG34_RS09605 PF00899 ThiF family COG34_RS09610 PF02597 ThiS family COG34_RS09615 PF05690 Thiazole biosynthesis protein ThiG COG34_RS09620 PF06968 Biotin and Thiamin Synthesis associated domain COG34_RS09620 PF04055 Radical SAM superfamily COG34_RS09630 PF05000 RNA polymerase Rpb1, domain 4 COG34_RS09630 PF04983 RNA polymerase Rpb1, domain 3 COG34_RS09630 PF00623 RNA polymerase Rpb1, domain 2 COG34_RS09630 PF04997 RNA polymerase Rpb1, domain 1 COG34_RS09630 PF04998 RNA polymerase Rpb1, domain 5 COG34_RS09635 PF04565 RNA polymerase Rpb2, domain 3 COG34_RS09635 PF00562 RNA polymerase Rpb2, domain 6 COG34_RS09635 PF04560 RNA polymerase Rpb2, domain 7 COG34_RS09635 PF10385 RNA polymerase beta subunit external 1 domain COG34_RS09635 PF04561 RNA polymerase Rpb2, domain 2 COG34_RS09635 PF04563 RNA polymerase beta subunit COG34_RS09640 PF00542 Ribosomal protein L7/L12 C-terminal domain COG34_RS09640 PF16320 Ribosomal protein L7/L12 dimerisation domain COG34_RS09645 PF00466 Ribosomal protein L10 COG34_RS09655 PF00687 Ribosomal protein L1p/L10e family COG34_RS09660 PF00298 Ribosomal protein L11, RNA binding domain COG34_RS09660 PF03946 Ribosomal protein L11, N-terminal domain COG34_RS09665 PF02357 Transcription termination factor nusG COG34_RS09665 PF00467 KOW motif COG34_RS09670 PF00584 SecE/Sec61-gamma subunits of protein translocation complex COG34_RS09675 PF00009 Elongation factor Tu GTP binding domain COG34_RS09675 PF03144 Elongation factor Tu domain 2 COG34_RS09675 PF03143 Elongation factor Tu C-terminal domain COG34_RS09710 PF00485 Phosphoribulokinase / Uridine kinase family COG34_RS09715 PF02237 Biotin protein ligase C terminal domain COG34_RS09715 PF03099 Biotin/lipoate A/B protein ligase family COG34_RS09715 PF08279 HTH domain COG34_RS09720 PF01565 FAD binding domain COG34_RS09720 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain COG34_RS09745 PF01177 Asp/Glu/Hydantoin racemase COG34_RS09750 PF00593 TonB dependent receptor COG34_RS09750 PF07715 TonB-dependent Receptor Plug Domain COG34_RS09755 PF05958 tRNA (Uracil-5-)-methyltransferase COG34_RS09760 PF07226 Protein of unknown function (DUF1422) COG34_RS09765 PF00440 Bacterial regulatory proteins, tetR family COG34_RS09775 PF07992 Pyridine nucleotide-disulphide oxidoreductase COG34_RS09775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain COG34_RS09780 PF03466 LysR substrate binding domain COG34_RS09780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS09785 PF07690 Major Facilitator Superfamily COG34_RS09790 PF13378 Enolase C-terminal domain-like COG34_RS09790 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain COG34_RS09800 PF14698 Argininosuccinate lyase C-terminal COG34_RS09800 PF00206 Lyase COG34_RS09805 PF00696 Amino acid kinase family COG34_RS09810 PF01118 Semialdehyde dehydrogenase, NAD binding domain COG34_RS09810 PF02774 Semialdehyde dehydrogenase, dimerisation domain COG34_RS09815 PF07687 Peptidase dimerisation domain COG34_RS09815 PF01546 Peptidase family M20/M25/M40 COG34_RS09820 PF00311 Phosphoenolpyruvate carboxylase COG34_RS09825 PF00884 Sulfatase COG34_RS09830 PF12833 Helix-turn-helix domain COG34_RS09835 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit COG34_RS09840 PF04055 Radical SAM superfamily COG34_RS09845 PF02901 Pyruvate formate lyase-like COG34_RS09845 PF01228 Glycine radical COG34_RS09850 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit COG34_RS09860 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 COG34_RS09860 PF05524 PEP-utilising enzyme, N-terminal COG34_RS09860 PF00391 PEP-utilising enzyme, mobile domain COG34_RS09860 PF02896 PEP-utilising enzyme, TIM barrel domain COG34_RS09860 PF00381 PTS HPr component phosphorylation site COG34_RS09865 PF00923 Transaldolase/Fructose-6-phosphate aldolase COG34_RS09870 PF00465 Iron-containing alcohol dehydrogenase COG34_RS09875 PF06940 Domain of unknown function (DUF1287) COG34_RS09880 PF00892 EamA-like transporter family COG34_RS09885 PF00141 Peroxidase COG34_RS09890 PF02219 Methylenetetrahydrofolate reductase COG34_RS09895 PF03447 Homoserine dehydrogenase, NAD binding domain COG34_RS09895 PF00742 Homoserine dehydrogenase COG34_RS09895 PF00696 Amino acid kinase family COG34_RS09900 PF01053 Cys/Met metabolism PLP-dependent enzyme COG34_RS09905 PF01340 Met Apo-repressor, MetJ COG34_RS09910 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family COG34_RS09925 PF05593 RHS Repeat COG34_RS09925 PF03527 RHS protein COG34_RS09925 PF14220 Domain of unknown function (DUF4329) COG34_RS09930 PF01197 Ribosomal protein L31 COG34_RS09935 PF18319 PriA DNA helicase Cys-rich region (CRR) domain COG34_RS09935 PF18074 Primosomal protein N C-terminal domain COG34_RS09935 PF17764 3′ DNA-binding domain (3′BD) COG34_RS09935 PF00271 Helicase conserved C-terminal domain COG34_RS09935 PF00270 DEAD/DEAH box helicase COG34_RS09940 PF00356 Bacterial regulatory proteins, lacI family COG34_RS09945 PF05036 Sporulation related domain COG34_RS09950 PF00227 Proteasome subunit COG34_RS09955 PF07724 AAA domain (Cdc48 subfamily) COG34_RS09955 PF10431 C-terminal, D2-small domain, of ClpB protein COG34_RS09955 PF00004 ATPase family associated with various cellular activities (AAA) COG34_RS09960 PF01040 UbiA prenyltransferase family COG34_RS09965 PF03737 Aldolase/RraA COG34_RS09970 PF06005 Cell division protein ZapB COG34_RS09975 PF00230 Major intrinsic protein COG34_RS09980 PF00370 FGGY family of carbohydrate kinases, N-terminal domain COG34_RS09980 PF02782 FGGY family of carbohydrate kinases, C-terminal domain COG34_RS09985 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded COG34_RS09990 PF00175 Oxidoreductase NAD-binding domain COG34_RS09990 PF00970 Oxidoreductase FAD-binding domain COG34_RS09995 PF00582 Universal stress protein family COG34_RS10000 PF04175 Protein of unknown function (DUF406) COG34_RS10005 PF05656 Protein of unknown function (DUF805) COG34_RS10010 PF07305 Protein of unknown function (DUF1454) COG34_RS10015 PF00121 Triosephosphate isomerase COG34_RS10020 PF02611 CDP-diacylglycerol pyrophosphatase COG34_RS10030 PF00365 Phosphofructokinase COG34_RS10035 PF01545 Cation efflux family COG34_RS10035 PF16916 Dimerisation domain of Zinc Transporter COG34_RS10040 PF07813 LTXXQ motif family protein COG34_RS10045 PF00072 Response regulator receiver domain COG34_RS10045 PF00486 Transcriptional regulatory protein, C terminal COG34_RS10050 PF00672 HAMP domain COG34_RS10050 PF00512 His Kinase A (phospho-acceptor) domain COG34_RS10050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS10050 PF16527 Two-component sensor protein CpxA, periplasmic domain COG34_RS10055 PF03473 MOSC domain COG34_RS10055 PF03475 3-alpha domain COG34_RS10060 PF03812 2-keto-3-deoxygluconate permease COG34_RS10070 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain COG34_RS10070 PF02777 Iron/manganese superoxide dismutases, C-terminal domain COG34_RS10075 PF06379 L-rhamnose-proton symport protein (RhaT) COG34_RS10080 PF12833 Helix-turn-helix domain COG34_RS10080 PF02311 AraC-like ligand binding domain COG34_RS10085 PF02311 AraC-like ligand binding domain COG34_RS10085 PF12833 Helix-turn-helix domain COG34_RS10090 PF00370 FGGY family of carbohydrate kinases, N-terminal domain COG34_RS10090 PF02782 FGGY family of carbohydrate kinases, C-terminal domain COG34_RS10095 PF06134 L-rhamnose isomerase (RhaA) COG34_RS10100 PF00596 Class II Aldolase and Adducin N-terminal domain COG34_RS10105 PF05336 L-rhamnose mutarotase COG34_RS10110 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 COG34_RS10115 PF02378 Phosphotransferase system, EIIC COG34_RS10115 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit COG34_RS10120 PF05343 M42 glutamyl aminopeptidase COG34_RS10125 PF08279 HTH domain COG34_RS10125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 COG34_RS10130 PF12889 Protein of unknown function (DUF3829) COG34_RS10135 PF02634 FdhD/NarQ family COG34_RS10145 PF04879 Molybdopterin oxidoreductase Fe4S4 domain COG34_RS10145 PF01568 Molydopterin dinucleotide binding domain COG34_RS10145 PF00384 Molybdopterin oxidoreductase COG34_RS10150 PF00384 Molybdopterin oxidoreductase COG34_RS10150 PF01568 Molydopterin dinucleotide binding domain COG34_RS10150 PF04879 Molybdopterin oxidoreductase Fe4S4 domain COG34_RS10155 PF09163 Formate dehydrogenase N, transmembrane COG34_RS10155 PF13247 4Fe-4S dicluster domain COG34_RS10160 PF01292 Prokaryotic cytochrome b561 COG34_RS10165 PF04216 Protein involved in formate dehydrogenase formation COG34_RS10175 PF01402 Ribbon-helix-helix protein, copG family COG34_RS10190 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system COG34_RS10195 PF07859 alpha/beta hydrolase fold COG34_RS10200 PF09500 Putative thioesterase (yiiD_Cterm) COG34_RS10200 PF00583 Acetyltransferase (GNAT) family COG34_RS10205 PF02580 D-Tyr-tRNA(Tyr) deacylase COG34_RS10210 PF03631 Virulence factor BrkB COG34_RS10215 PF13419 Haloacid dehalogenase-like hydrolase COG34_RS10220 PF00455 DeoR C terminal sensor domain COG34_RS10220 PF08220 DeoR-like helix-turn-helix domain COG34_RS10225 PF00294 pfkB family carbohydrate kinase COG34_RS10230 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase COG34_RS10230 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase COG34_RS10235 PF01791 DeoC/LacD family aldolase COG34_RS10245 PF01263 Aldose 1-epimerase COG34_RS10250 PF01055 Glycosyl hydrolases family 31 COG34_RS10265 PF06178 Oligogalacturonate-specific porin protein (KdgM) COG34_RS10270 PF07690 Major Facilitator Superfamily COG34_RS10275 PF01261 Xylose isomerase-like TIM barrel COG34_RS10280 PF07702 UTRA domain COG34_RS10280 PF00392 Bacterial regulatory proteins, gntR family COG34_RS10285 PF00679 Elongation factor G C-terminus COG34_RS10285 PF00009 Elongation factor Tu GTP binding domain COG34_RS10285 PF03144 Elongation factor Tu domain 2 COG34_RS10295 PF00120 Glutamine synthetase, catalytic domain COG34_RS10295 PF03951 Glutamine synthetase, beta-Grasp domain COG34_RS10305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS10305 PF00512 His Kinase A (phospho-acceptor) domain COG34_RS10305 PF00989 PAS fold COG34_RS10310 PF00072 Response regulator receiver domain COG34_RS10310 PF00158 Sigma-54 interaction domain COG34_RS10310 PF02954 Bacterial regulatory protein, Fis family COG34_RS10320 PF06969 HemN C-terminal domain COG34_RS10320 PF04055 Radical SAM superfamily COG34_RS10325 PF04220 Der GTPase activator (YihI) COG34_RS10335 PF01926 50S ribosome-binding GTPase COG34_RS10340 PF01367 5'-3' exonuclease, C-terminal SAM fold COG34_RS10340 PF01612 3'-5' exonuclease COG34_RS10340 PF00476 DNA polymerase family A COG34_RS10340 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain COG34_RS10350 PF01553 Acyltransferase COG34_RS10355 PF06097 Bacterial protein of unknown function (DUF945) COG34_RS10360 PF01323 DSBA-like thioredoxin domain COG34_RS10365 PF01636 Phosphotransferase enzyme family COG34_RS10370 PF06288 Protein of unknown function (DUF1040) COG34_RS10375 PF12804 MobA-like NTP transferase domain COG34_RS10380 PF03205 Molybdopterin guanine dinucleotide synthesis protein B COG34_RS10410 PF12724 Flavodoxin domain COG34_RS10415 PF02386 Cation transport protein COG34_RS10420 PF09186 Domain of unknown function (DUF1949) COG34_RS10420 PF01205 Uncharacterized protein family UPF0029 COG34_RS10425 PF00557 Metallopeptidase family M24 COG34_RS10430 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain COG34_RS10430 PF00378 Enoyl-CoA hydratase/isomerase COG34_RS10430 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain COG34_RS10435 PF00108 Thiolase, N-terminal domain COG34_RS10435 PF02803 Thiolase, C-terminal domain COG34_RS10440 PF00175 Oxidoreductase NAD-binding domain COG34_RS10440 PF00970 Oxidoreductase FAD-binding domain COG34_RS10445 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase COG34_RS10450 PF02357 Transcription termination factor nusG COG34_RS10455 PF01026 TatD related DNase COG34_RS10460 PF00902 Sec-independent protein translocase protein (TatC) COG34_RS10470 PF02416 mttA/Hcf106 family COG34_RS10475 PF03109 ABC1 family COG34_RS10480 PF02036 SCP-2 sterol transfer family COG34_RS10485 PF01209 ubiE/COQ5 methyltransferase family COG34_RS10490 PF02646 RmuC family COG34_RS10495 PF01048 Phosphorylase superfamily COG34_RS10500 PF01738 Dienelactone hydrolase family COG34_RS10505 PF08267 Cobalamin-independent synthase, N-terminal domain COG34_RS10505 PF01717 Cobalamin-independent synthase, Catalytic domain COG34_RS10510 PF03466 LysR substrate binding domain COG34_RS10510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS10515 PF00892 EamA-like transporter family COG34_RS10525 PF12146 Serine aminopeptidase, S33 COG34_RS10530 PF01810 LysE type translocator COG34_RS10535 PF01810 LysE type translocator COG34_RS10540 PF16124 RecQ zinc-binding COG34_RS10540 PF00570 HRDC domain COG34_RS10540 PF00271 Helicase conserved C-terminal domain COG34_RS10540 PF09382 RQC domain COG34_RS10540 PF00270 DEAD/DEAH box helicase COG34_RS10545 PF02253 Phospholipase A1 COG34_RS10550 PF03061 Thioesterase superfamily COG34_RS10555 PF00892 EamA-like transporter family COG34_RS10570 PF01544 CorA-like Mg2+ transporter protein COG34_RS10585 PF01544 CorA-like Mg2+ transporter protein COG34_RS10590 PF09992 Phosphodiester glycosidase COG34_RS10595 PF13361 UvrD-like helicase C-terminal domain COG34_RS10595 PF00580 UvrD/REP helicase N-terminal domain COG34_RS10600 PF13419 Haloacid dehalogenase-like hydrolase COG34_RS10605 PF00589 Phage integrase family COG34_RS10605 PF02899 Phage integrase, N-terminal SAM-like domain COG34_RS10610 PF04340 Protein of unknown function, DUF484 COG34_RS10615 PF01678 Diaminopimelate epimerase COG34_RS10620 PF13627 Prokaryotic lipoprotein-attachment site COG34_RS10640 PF01491 Frataxin-like domain COG34_RS10645 PF12633 Adenylate cyclase NT domain COG34_RS10645 PF01295 Adenylate cyclase, class-I COG34_RS10655 PF03900 Porphobilinogen deaminase, C-terminal domain COG34_RS10655 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain COG34_RS10660 PF02602 Uroporphyrinogen-III synthase HemD COG34_RS10665 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase COG34_RS10670 PF07219 HemY protein N-terminus COG34_RS10670 PF07719 Tetratricopeptide repeat COG34_RS10675 PF04055 Radical SAM superfamily COG34_RS10675 PF13186 Iron-sulfur cluster-binding domain COG34_RS10700 PF00324 Amino acid permease COG34_RS10705 PF03808 Glycosyl transferase WecB/TagA/CpsF family COG34_RS10710 PF06899 WzyE protein, O-antigen assembly polymerase COG34_RS10715 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 COG34_RS10720 PF01943 Polysaccharide biosynthesis protein COG34_RS10725 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family COG34_RS10735 PF00483 Nucleotidyl transferase COG34_RS10740 PF16363 GDP-mannose 4,6 dehydratase COG34_RS10745 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain COG34_RS10745 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain COG34_RS10745 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain COG34_RS10750 PF02350 UDP-N-acetylglucosamine 2-epimerase COG34_RS10755 PF02706 Chain length determinant protein COG34_RS10760 PF00953 Glycosyl transferase family 4 COG34_RS10770 PF07498 Rho termination factor, N-terminal domain COG34_RS10770 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain COG34_RS10770 PF07497 Rho termination factor, RNA-binding domain COG34_RS10780 PF00085 Thioredoxin COG34_RS10785 PF00271 Helicase conserved C-terminal domain COG34_RS10785 PF00270 DEAD/DEAH box helicase COG34_RS10795 PF02541 Ppx/GppA phosphatase family COG34_RS10800 PF13361 UvrD-like helicase C-terminal domain COG34_RS10800 PF00580 UvrD/REP helicase N-terminal domain COG34_RS10805 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system COG34_RS10815 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain COG34_RS10815 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain COG34_RS10820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS10820 PF03466 LysR substrate binding domain COG34_RS10825 PF01548 Transposase COG34_RS10825 PF02371 Transposase IS116/IS110/IS902 family COG34_RS10835 PF00291 Pyridoxal-phosphate dependent enzyme COG34_RS10835 PF00585 C-terminal regulatory domain of Threonine dehydratase COG34_RS10840 PF00920 Dehydratase family COG34_RS10845 PF01063 Amino-transferase class IV COG34_RS10855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain COG34_RS10855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain COG34_RS10855 PF00205 Thiamine pyrophosphate enzyme, central domain COG34_RS10860 PF08046 IlvGEDA operon leader peptide COG34_RS10870 PF01078 Magnesium chelatase, subunit ChlI COG34_RS10870 PF13335 Magnesium chelatase, subunit ChlI C-terminal COG34_RS10875 PF04219 Protein of unknown function, DUF COG34_RS10880 PF03466 LysR substrate binding domain COG34_RS10880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS10915 PF07729 FCD domain COG34_RS10915 PF00392 Bacterial regulatory proteins, gntR family COG34_RS10920 PF07690 Major Facilitator Superfamily COG34_RS10925 PF00356 Bacterial regulatory proteins, lacI family COG34_RS10930 PF00294 pfkB family carbohydrate kinase COG34_RS10935 PF13407 Periplasmic binding protein domain COG34_RS10940 PF02653 Branched-chain amino acid transport system / permease component COG34_RS10945 PF00005 ABC transporter COG34_RS10950 PF05025 RbsD / FucU transport protein family COG34_RS10955 PF02705 K+ potassium transporter COG34_RS10960 PF12592 Protein of unknown function (DUF3763) COG34_RS10960 PF17868 AAA lid domain COG34_RS10960 PF07728 AAA domain (dynein-related subfamily) COG34_RS10965 PF05762 VWA domain containing CoxE-like protein COG34_RS10970 PF03590 Aspartate-ammonia ligase COG34_RS10975 PF01037 Lrp/AsnC ligand binding domain COG34_RS10980 PF00258 Flavodoxin COG34_RS10985 PF01134 Glucose inhibited division protein A COG34_RS10985 PF13932 GidA associated domain COG34_RS10990 PF02527 rRNA small subunit methyltransferase G COG34_RS10995 PF03899 ATP synthase I chain COG34_RS11000 PF00119 ATP synthase A chain COG34_RS11005 PF00137 ATP synthase subunit C COG34_RS11010 PF00430 ATP synthase B/B' CF(0) COG34_RS11015 PF00213 ATP synthase delta (OSCP) subunit COG34_RS11020 PF00306 ATP synthase alpha/beta chain, C terminal domain COG34_RS11020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain COG34_RS11020 PF02874 ATP synthase alpha/beta family, beta-barrel domain COG34_RS11025 PF00231 ATP synthase COG34_RS11030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain COG34_RS11030 PF02874 ATP synthase alpha/beta family, beta-barrel domain COG34_RS11035 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain COG34_RS11035 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain COG34_RS11045 PF12804 MobA-like NTP transferase domain COG34_RS11045 PF00132 Bacterial transferase hexapeptide (six repeats) COG34_RS11045 PF14602 Hexapeptide repeat of succinyl-transferase COG34_RS11050 PF01380 SIS domain COG34_RS11055 PF00419 Fimbrial protein COG34_RS11060 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain COG34_RS11060 PF02753 Pili assembly chaperone PapD, C-terminal domain COG34_RS11065 PF13953 PapC C-terminal domain COG34_RS11065 PF13954 PapC N-terminal domain COG34_RS11065 PF00577 Outer membrane usher protein COG34_RS11075 PF12849 PBP superfamily domain COG34_RS11080 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS11085 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS11090 PF00005 ABC transporter COG34_RS11095 PF01895 PhoU domain COG34_RS11100 PF03123 CAT RNA binding domain COG34_RS11100 PF00874 PRD domain COG34_RS11105 PF02378 Phosphotransferase system, EIIC COG34_RS11105 PF00367 phosphotransferase system, EIIB COG34_RS11105 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 COG34_RS11110 PF00232 Glycosyl hydrolase family 1 COG34_RS11115 PF11471 Maltoporin periplasmic N-terminal extension COG34_RS11115 PF02264 LamB porin COG34_RS11120 PF00756 Putative esterase COG34_RS11120 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) COG34_RS11125 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase COG34_RS11130 PF03691 Uncharacterised protein family (UPF0167) COG34_RS11140 PF13419 Haloacid dehalogenase-like hydrolase COG34_RS11145 PF00860 Permease family COG34_RS11150 PF03358 NADPH-dependent FMN reductase COG34_RS11160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS11160 PF03466 LysR substrate binding domain COG34_RS11165 PF07690 Major Facilitator Superfamily COG34_RS11170 PF03222 Tryptophan/tyrosine permease family COG34_RS11175 PF01212 Beta-eliminating lyase COG34_RS11180 PF08053 Tryptophanase operon leader peptide COG34_RS11185 PF10396 GTP-binding protein TrmE N-terminus COG34_RS11185 PF01926 50S ribosome-binding GTPase COG34_RS11185 PF12631 MnmE helical domain COG34_RS11190 PF14849 YidC periplasmic domain COG34_RS11190 PF02096 60Kd inner membrane protein COG34_RS11195 PF01809 Putative membrane protein insertion efficiency factor COG34_RS11200 PF00825 Ribonuclease P COG34_RS11205 PF00468 Ribosomal protein L34 COG34_RS11215 PF00308 Bacterial dnaA protein COG34_RS11215 PF08299 Bacterial dnaA protein helix-turn-helix COG34_RS11215 PF11638 DnaA N-terminal domain COG34_RS11220 PF02768 DNA polymerase III beta subunit, C-terminal domain COG34_RS11220 PF02767 DNA polymerase III beta subunit, central domain COG34_RS11220 PF00712 DNA polymerase III beta subunit, N-terminal domain COG34_RS11225 PF02463 RecF/RecN/SMC N terminal domain COG34_RS11230 PF00204 DNA gyrase B COG34_RS11230 PF18053 DNA gyrase B subunit insert domain COG34_RS11230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS11230 PF00986 DNA gyrase B subunit, carboxyl terminus COG34_RS11230 PF01751 Toprim domain COG34_RS11235 PF06078 Bacterial protein of unknown function (DUF937) COG34_RS11250 PF07729 FCD domain COG34_RS11250 PF00392 Bacterial regulatory proteins, gntR family COG34_RS11255 PF05035 2-keto-3-deoxy-galactonokinase COG34_RS11260 PF01081 KDPG and KHG aldolase COG34_RS11265 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain COG34_RS11265 PF13378 Enolase C-terminal domain-like COG34_RS11270 PF07690 Major Facilitator Superfamily COG34_RS11275 PF01494 FAD binding domain COG34_RS11280 PF07676 WD40-like Beta Propeller Repeat COG34_RS11280 PF12566 Protein of unknown function (DUF3748) COG34_RS11285 PF07119 Protein of unknown function (DUF1375) COG34_RS11290 PF00011 Hsp20/alpha crystallin family COG34_RS11295 PF00011 Hsp20/alpha crystallin family COG34_RS11300 PF06826 Predicted Permease Membrane Region COG34_RS11300 PF02080 TrkA-C domain COG34_RS11305 PF00392 Bacterial regulatory proteins, gntR family COG34_RS11305 PF07702 UTRA domain COG34_RS11310 PF02378 Phosphotransferase system, EIIC COG34_RS11310 PF00367 phosphotransferase system, EIIB COG34_RS11315 PF02056 Family 4 glycosyl hydrolase COG34_RS11325 PF02311 AraC-like ligand binding domain COG34_RS11325 PF12833 Helix-turn-helix domain COG34_RS11330 PF00474 Sodium:solute symporter family COG34_RS11335 PF16347 Domain of unknown function (DUF4976) COG34_RS11335 PF00884 Sulfatase COG34_RS11345 PF02656 Domain of unknown function (DUF202) COG34_RS11350 PF02656 Domain of unknown function (DUF202) COG34_RS11360 PF07690 Major Facilitator Superfamily COG34_RS11370 PF13939 Toxin TisB, type I toxin-antitoxin system COG34_RS11390 PF08049 IlvB leader peptide COG34_RS11395 PF00205 Thiamine pyrophosphate enzyme, central domain COG34_RS11395 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain COG34_RS11395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain COG34_RS11400 PF01842 ACT domain COG34_RS11405 PF00072 Response regulator receiver domain COG34_RS11405 PF00196 Bacterial regulatory proteins, luxR family COG34_RS11410 PF05231 MASE1 COG34_RS11410 PF07730 Histidine kinase COG34_RS11410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS11415 PF07690 Major Facilitator Superfamily COG34_RS11420 PF07690 Major Facilitator Superfamily COG34_RS11425 PF01979 Amidohydrolase family COG34_RS11425 PF13382 Adenine deaminase C-terminal domain COG34_RS11430 PF00860 Permease family COG34_RS11435 PF06711 Protein of unknown function (DUF1198) COG34_RS11445 PF07690 Major Facilitator Superfamily COG34_RS11460 PF03180 NLPA lipoprotein COG34_RS11465 PF00892 EamA-like transporter family COG34_RS11470 PF07690 Major Facilitator Superfamily COG34_RS11495 PF13802 Galactose mutarotase-like COG34_RS11495 PF01055 Glycosyl hydrolases family 31 COG34_RS11500 PF05170 AsmA family COG34_RS11505 PF00860 Permease family COG34_RS11510 PF03616 Sodium/glutamate symporter COG34_RS11520 PF17191 RecG wedge domain COG34_RS11520 PF00271 Helicase conserved C-terminal domain COG34_RS11520 PF00270 DEAD/DEAH box helicase COG34_RS11525 PF12105 SpoU, rRNA methylase, C-terminal COG34_RS11525 PF00588 SpoU rRNA Methylase family COG34_RS11530 PF02824 TGS domain COG34_RS11530 PF04607 Region found in RelA / SpoT proteins COG34_RS11530 PF13291 ACT domain COG34_RS11535 PF01192 RNA polymerase Rpb6 COG34_RS11540 PF00625 Guanylate kinase COG34_RS11545 PF03120 NAD-dependent DNA ligase OB-fold domain COG34_RS11545 PF01653 NAD-dependent DNA ligase adenylation domain COG34_RS11550 PF03458 UPF0126 domain COG34_RS11560 PF03755 YicC-like family, N-terminal region COG34_RS11560 PF08340 Domain of unknown function (DUF1732) COG34_RS11570 PF03725 3' exoribonuclease family, domain 2 COG34_RS11570 PF01138 3' exoribonuclease family, domain 1 COG34_RS11575 PF00156 Phosphoribosyl transferase domain COG34_RS11580 PF00440 Bacterial regulatory proteins, tetR family COG34_RS11585 PF00692 dUTPase COG34_RS11590 PF04127 DNA / pantothenate metabolism flavoprotein COG34_RS11590 PF02441 Flavoprotein COG34_RS11595 PF04002 RadC-like JAB domain COG34_RS11600 PF00830 Ribosomal L28 family COG34_RS11605 PF00471 Ribosomal protein L33 COG34_RS11610 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain COG34_RS11610 PF06827 Zinc finger found in FPG and IleRS COG34_RS11610 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain COG34_RS11615 PF01467 Cytidylyltransferase-like COG34_RS11620 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) COG34_RS11625 PF01075 Glycosyltransferase family 9 (heptosyltransferase) COG34_RS11630 PF00534 Glycosyl transferases group 1 COG34_RS11630 PF13439 Glycosyltransferase Family 4 COG34_RS11640 PF08437 Glycosyl transferase family 8 C-terminal COG34_RS11640 PF01501 Glycosyl transferase family 8 COG34_RS11645 PF01501 Glycosyl transferase family 8 COG34_RS11645 PF08437 Glycosyl transferase family 8 C-terminal COG34_RS11650 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) COG34_RS11655 PF08437 Glycosyl transferase family 8 C-terminal COG34_RS11655 PF01501 Glycosyl transferase family 8 COG34_RS11660 PF00535 Glycosyl transferase family 2 COG34_RS11665 PF04932 O-Antigen ligase COG34_RS11670 PF01075 Glycosyltransferase family 9 (heptosyltransferase) COG34_RS11675 PF01075 Glycosyltransferase family 9 (heptosyltransferase) COG34_RS11680 PF01370 NAD dependent epimerase/dehydratase family COG34_RS11685 PF00155 Aminotransferase class I and II COG34_RS11690 PF08240 Alcohol dehydrogenase GroES-like domain COG34_RS11690 PF00107 Zinc-binding dehydrogenase COG34_RS11695 PF00535 Glycosyl transferase family 2 COG34_RS11700 PF04748 Divergent polysaccharide deacetylase COG34_RS11705 PF01551 Peptidase family M23 COG34_RS11710 PF01676 Metalloenzyme superfamily COG34_RS11710 PF06415 BPG-independent PGAM N-terminus (iPGM_N) COG34_RS11720 PF00581 Rhodanese-like domain COG34_RS11725 PF00462 Glutaredoxin COG34_RS11730 PF02556 Preprotein translocase subunit SecB COG34_RS11735 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus COG34_RS11735 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus COG34_RS11740 PF06426 Serine acetyltransferase, N-terminal COG34_RS11740 PF00132 Bacterial transferase hexapeptide (six repeats) COG34_RS11745 PF00588 SpoU rRNA Methylase family COG34_RS11750 PF01070 FMN-dependent dehydrogenase COG34_RS11755 PF07729 FCD domain COG34_RS11755 PF00392 Bacterial regulatory proteins, gntR family COG34_RS11760 PF02652 L-lactate permease COG34_RS11770 PF05658 Head domain of trimeric autotransporter adhesin COG34_RS11770 PF13018 Extended Signal Peptide of Type V secretion system COG34_RS11770 PF03895 YadA-like membrane anchor domain COG34_RS11770 PF05662 Coiled stalk of trimeric autotransporter adhesin COG34_RS11775 PF11622 Protein of unknown function (DUF3251) COG34_RS11785 PF10928 Protein of unknown function (DUF2810) COG34_RS11795 PF05068 Mannitol repressor COG34_RS11800 PF01232 Mannitol dehydrogenase Rossmann domain COG34_RS11800 PF08125 Mannitol dehydrogenase C-terminal domain COG34_RS11805 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit COG34_RS11805 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 COG34_RS11805 PF02378 Phosphotransferase system, EIIC COG34_RS11810 PF11742 Protein of unknown function (DUF3302) COG34_RS11815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion COG34_RS11815 PF00529 HlyD membrane-fusion protein of T1SS COG34_RS11820 PF15596 Immunity protein 57 COG34_RS11845 PF03130 PBS lyase HEAT-like repeat COG34_RS11850 PF15631 NTF2 fold immunity protein COG34_RS11855 PF14220 Domain of unknown function (DUF4329) COG34_RS11855 PF03527 RHS protein COG34_RS11855 PF05593 RHS Repeat COG34_RS11860 PF13417 Glutathione S-transferase, N-terminal domain COG34_RS11860 PF00043 Glutathione S-transferase, C-terminal domain COG34_RS11865 PF03841 L-seryl-tRNA selenium transferase COG34_RS11865 PF12390 Selenocysteine synthase N terminal COG34_RS11870 PF09107 Elongation factor SelB, winged helix COG34_RS11870 PF09106 Elongation factor SelB, winged helix COG34_RS11870 PF00009 Elongation factor Tu GTP binding domain COG34_RS11870 PF03144 Elongation factor Tu domain 2 COG34_RS11875 PF00465 Iron-containing alcohol dehydrogenase COG34_RS11880 PF00171 Aldehyde dehydrogenase family COG34_RS11895 PF11742 Protein of unknown function (DUF3302) COG34_RS11900 PF00529 HlyD membrane-fusion protein of T1SS COG34_RS11900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion COG34_RS11905 PF03466 LysR substrate binding domain COG34_RS11905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS11910 PF06629 MltA-interacting protein MipA COG34_RS11915 PF07944 Beta-L-arabinofuranosidase, GH127 COG34_RS11930 PF00596 Class II Aldolase and Adducin N-terminal domain COG34_RS11935 PF01261 Xylose isomerase-like TIM barrel COG34_RS11940 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family COG34_RS11945 PF00370 FGGY family of carbohydrate kinases, N-terminal domain COG34_RS11945 PF02782 FGGY family of carbohydrate kinases, C-terminal domain COG34_RS11950 PF03480 Bacterial extracellular solute-binding protein, family 7 COG34_RS11955 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component COG34_RS11960 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component COG34_RS11965 PF04074 YhcH/YjgK/YiaL COG34_RS11970 PF02615 Malate/L-lactate dehydrogenase COG34_RS11975 PF01614 Bacterial transcriptional regulator COG34_RS11975 PF09339 IclR helix-turn-helix domain COG34_RS11980 PF13247 4Fe-4S dicluster domain COG34_RS11985 PF00155 Aminotransferase class I and II COG34_RS11990 PF00128 Alpha amylase, catalytic domain COG34_RS11995 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase COG34_RS12000 PF12833 Helix-turn-helix domain COG34_RS12005 PF02653 Branched-chain amino acid transport system / permease component COG34_RS12010 PF00005 ABC transporter COG34_RS12015 PF13407 Periplasmic binding protein domain COG34_RS12025 PF02782 FGGY family of carbohydrate kinases, C-terminal domain COG34_RS12025 PF00370 FGGY family of carbohydrate kinases, N-terminal domain COG34_RS12030 PF05360 yiaA/B two helix domain COG34_RS12035 PF05360 yiaA/B two helix domain COG34_RS12040 PF01757 Acyltransferase family COG34_RS12045 PF13983 YsaB-like lipoprotein COG34_RS12050 PF02091 Glycyl-tRNA synthetase alpha subunit COG34_RS12055 PF05746 DALR anticodon binding domain COG34_RS12055 PF02092 Glycyl-tRNA synthetase beta subunit COG34_RS12060 PF01848 Hok/gef family COG34_RS12065 PF00313 'Cold-shock' DNA-binding domain COG34_RS12070 PF01381 Helix-turn-helix COG34_RS12075 PF11254 Protein of unknown function (DUF3053) COG34_RS12080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain COG34_RS12080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain COG34_RS12085 PF13488 Glycine zipper COG34_RS12085 PF00691 OmpA family COG34_RS12090 PF01568 Molydopterin dinucleotide binding domain COG34_RS12090 PF00384 Molybdopterin oxidoreductase COG34_RS12090 PF18364 Molybdopterin oxidoreductase N-terminal domain COG34_RS12095 PF00583 Acetyltransferase (GNAT) family COG34_RS12100 PF03352 Methyladenine glycosylase COG34_RS12105 PF03797 Autotransporter beta-domain COG34_RS12115 PF07690 Major Facilitator Superfamily COG34_RS12120 PF08019 Phosphoethanolamine transferase EptA/EptB COG34_RS12120 PF00884 Sulfatase COG34_RS12140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle COG34_RS12145 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS12150 PF12911 N-terminal TM domain of oligopeptide transport permease C COG34_RS12150 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS12155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region COG34_RS12155 PF00005 ABC transporter COG34_RS12160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region COG34_RS12160 PF00005 ABC transporter COG34_RS12165 PF03222 Tryptophan/tyrosine permease family COG34_RS12180 PF13940 Toxin Ldr, type I toxin-antitoxin system COG34_RS12190 PF13940 Toxin Ldr, type I toxin-antitoxin system COG34_RS12200 PF13940 Toxin Ldr, type I toxin-antitoxin system COG34_RS12205 PF11658 Cellulose biosynthesis protein BcsG COG34_RS12210 PF11120 Cellulose biosynthesis protein BcsF COG34_RS12215 PF10995 Cellulose biosynthesis GIL COG34_RS12220 PF10945 Cellulose biosynthesis protein BcsR COG34_RS12225 PF06564 Cellulose biosynthesis protein BcsQ COG34_RS12230 PF00535 Glycosyl transferase family 2 COG34_RS12230 PF07238 PilZ domain COG34_RS12230 PF03552 Cellulose synthase COG34_RS12235 PF03170 Bacterial cellulose synthase subunit COG34_RS12240 PF01270 Glycosyl hydrolases family 8 COG34_RS12245 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) COG34_RS12250 PF00672 HAMP domain COG34_RS12250 PF00990 Diguanylate cyclase, GGDEF domain COG34_RS12250 PF00563 EAL domain COG34_RS12250 PF17154 Gammaproteobacterial periplasmic sensor domain COG34_RS12260 PF00375 Sodium:dicarboxylate symporter family COG34_RS12265 PF05193 Peptidase M16 inactive domain COG34_RS12265 PF00675 Insulinase (Peptidase family M16) COG34_RS12270 PF00294 pfkB family carbohydrate kinase COG34_RS12280 PF00563 EAL domain COG34_RS12285 PF05170 AsmA family COG34_RS12290 PF07690 Major Facilitator Superfamily COG34_RS12290 PF00083 Sugar (and other) transporter COG34_RS12295 PF03631 Virulence factor BrkB COG34_RS12300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS12300 PF03466 LysR substrate binding domain COG34_RS12305 PF00196 Bacterial regulatory proteins, luxR family COG34_RS12310 PF01204 Trehalase COG34_RS12315 PF14376 Haem-binding domain COG34_RS12315 PF00034 Cytochrome c COG34_RS12315 PF03150 Di-haem cytochrome c peroxidase COG34_RS12320 PF00282 Pyridoxal-dependent decarboxylase conserved domain COG34_RS12325 PF12833 Helix-turn-helix domain COG34_RS12330 PF12833 Helix-turn-helix domain COG34_RS12340 PF00873 AcrB/AcrD/AcrF family COG34_RS12345 PF00529 HlyD membrane-fusion protein of T1SS COG34_RS12345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion COG34_RS12355 PF00196 Bacterial regulatory proteins, luxR family COG34_RS12360 PF03729 Short repeat of unknown function (DUF308) COG34_RS12365 PF06411 HdeA/HdeB family COG34_RS12370 PF06411 HdeA/HdeB family COG34_RS12375 PF02308 MgtC family COG34_RS12380 PF00196 Bacterial regulatory proteins, luxR family COG34_RS12390 PF03843 Outer membrane lipoprotein Slp family COG34_RS12410 PF03960 ArsC family COG34_RS12415 PF02040 Arsenical pump membrane protein COG34_RS12420 PF01022 Bacterial regulatory protein, arsR family COG34_RS12435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain COG34_RS12435 PF07992 Pyridine nucleotide-disulphide oxidoreductase COG34_RS12440 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ COG34_RS12445 PF01432 Peptidase family M3 COG34_RS12450 PF04445 Putative SAM-dependent methyltransferase COG34_RS12455 PF00854 POT family COG34_RS12465 PF00582 Universal stress protein family COG34_RS12470 PF10625 Universal stress protein B (UspB) COG34_RS12475 PF01384 Phosphate transporter family COG34_RS12485 PF08722 TnsA endonuclease N terminal COG34_RS12485 PF08721 TnsA endonuclease C terminal COG34_RS12490 PF00665 Integrase core domain COG34_RS12495 PF13401 AAA domain COG34_RS12495 PF11426 Tn7 transposition regulator TnsC COG34_RS12530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS12530 PF00512 His Kinase A (phospho-acceptor) domain COG34_RS12530 PF00672 HAMP domain COG34_RS12535 PF00072 Response regulator receiver domain COG34_RS12535 PF00486 Transcriptional regulatory protein, C terminal COG34_RS12540 PF02321 Outer membrane efflux protein COG34_RS12545 PF11604 Copper binding periplasmic protein CusF COG34_RS12550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion COG34_RS12555 PF00873 AcrB/AcrD/AcrF family COG34_RS12565 PF04945 YHS domain COG34_RS12580 PF13817 IS66 C-terminal element COG34_RS12580 PF03050 Transposase IS66 family COG34_RS12580 PF13005 zinc-finger binding domain of transposase IS66 COG34_RS12580 PF13007 Transposase C of IS166 homeodomain COG34_RS12585 PF05717 IS66 Orf2 like protein COG34_RS12590 PF00665 Integrase core domain COG34_RS12590 PF13276 HTH-like domain COG34_RS12590 PF01527 Transposase COG34_RS12595 PF04225 Opacity-associated protein A LysM-like domain COG34_RS12595 PF01551 Peptidase family M23 COG34_RS12605 PF07731 Multicopper oxidase COG34_RS12605 PF00394 Multicopper oxidase COG34_RS12605 PF07732 Multicopper oxidase COG34_RS12610 PF05275 Copper resistance protein B precursor (CopB) COG34_RS12615 PF04234 CopC domain COG34_RS12620 PF05425 Copper resistance protein D COG34_RS12625 PF00072 Response regulator receiver domain COG34_RS12625 PF00486 Transcriptional regulatory protein, C terminal COG34_RS12630 PF00512 His Kinase A (phospho-acceptor) domain COG34_RS12630 PF00672 HAMP domain COG34_RS12630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS12640 PF10951 Protein of unknown function (DUF2776) COG34_RS12655 PF13258 Domain of unknown function (DUF4049) COG34_RS12660 PF13533 Biotin-lipoyl like COG34_RS12665 PF00005 ABC transporter COG34_RS12685 PF08753 NikR C terminal nickel binding domain COG34_RS12685 PF01402 Ribbon-helix-helix protein, copG family COG34_RS12690 PF00005 ABC transporter COG34_RS12695 PF00005 ABC transporter COG34_RS12700 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS12705 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS12710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle COG34_RS12715 PF01648 4'-phosphopantetheinyl transferase superfamily COG34_RS12720 PF01594 AI-2E family transporter COG34_RS12725 PF07690 Major Facilitator Superfamily COG34_RS12730 PF08786 DcrB COG34_RS12735 PF02592 Putative vitamin uptake transporter COG34_RS12740 PF01206 Sulfurtransferase TusA COG34_RS12745 PF00403 Heavy-metal-associated domain COG34_RS12750 PF07947 YhhN family COG34_RS12755 PF10694 Protein of unknown function (DUF2500) COG34_RS12760 PF06611 Protein of unknown function (DUF1145) COG34_RS12770 PF00448 SRP54-type protein, GTPase domain COG34_RS12770 PF02881 SRP54-type protein, helical bundle domain COG34_RS12775 PF00005 ABC transporter COG34_RS12780 PF18075 FtsX extracellular domain COG34_RS12780 PF02687 FtsX-like permease family COG34_RS12785 PF04545 Sigma-70, region 4 COG34_RS12785 PF04542 Sigma-70 region 2 COG34_RS12790 PF13458 Periplasmic binding protein COG34_RS12805 PF12568 Acetyltransferase (GNAT) domain, PanZ COG34_RS12815 PF13458 Periplasmic binding protein COG34_RS12820 PF02653 Branched-chain amino acid transport system / permease component COG34_RS12825 PF02653 Branched-chain amino acid transport system / permease component COG34_RS12825 PF11862 Domain of unknown function (DUF3382) COG34_RS12830 PF00005 ABC transporter COG34_RS12830 PF12399 Branched-chain amino acid ATP-binding cassette transporter COG34_RS12835 PF00005 ABC transporter COG34_RS12840 PF13416 Bacterial extracellular solute-binding protein COG34_RS12845 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS12850 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS12855 PF17912 MalK OB fold domain COG34_RS12855 PF00005 ABC transporter COG34_RS12860 PF03009 Glycerophosphoryl diester phosphodiesterase family COG34_RS12865 PF10956 Protein of unknown function (DUF2756) COG34_RS12875 PF15567 Immunity protein 35 COG34_RS12890 PF05638 Type VI secretion system effector, Hcp COG34_RS12895 PF00583 Acetyltransferase (GNAT) family COG34_RS12905 PF01408 Oxidoreductase family, NAD-binding Rossmann fold COG34_RS12905 PF02894 Oxidoreductase family, C-terminal alpha/beta domain COG34_RS12910 PF02678 Pirin COG34_RS12910 PF17954 Quercetinase C-terminal cupin domain COG34_RS12915 PF00356 Bacterial regulatory proteins, lacI family COG34_RS12915 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family COG34_RS12920 PF01202 Shikimate kinase COG34_RS12925 PF02447 GntP family permease COG34_RS12930 PF01914 MarC family integral membrane protein COG34_RS12935 PF02774 Semialdehyde dehydrogenase, dimerisation domain COG34_RS12935 PF01118 Semialdehyde dehydrogenase, NAD binding domain COG34_RS12940 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) COG34_RS12940 PF02806 Alpha amylase, C-terminal all-beta domain COG34_RS12940 PF00128 Alpha amylase, catalytic domain COG34_RS12945 PF00128 Alpha amylase, catalytic domain COG34_RS12945 PF18390 Glycogen debranching enzyme C-terminal domain COG34_RS12945 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) COG34_RS12950 PF00483 Nucleotidyl transferase COG34_RS12955 PF08323 Starch synthase catalytic domain COG34_RS12955 PF00534 Glycosyl transferases group 1 COG34_RS12960 PF00343 Carbohydrate phosphorylase COG34_RS12990 PF16901 C-terminal domain of alpha-glycerophosphate oxidase COG34_RS12990 PF01266 FAD dependent oxidoreductase COG34_RS12995 PF00581 Rhodanese-like domain COG34_RS13000 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease COG34_RS13000 PF01694 Rhomboid family COG34_RS13005 PF00455 DeoR C terminal sensor domain COG34_RS13005 PF08220 DeoR-like helix-turn-helix domain COG34_RS13010 PF00158 Sigma-54 interaction domain COG34_RS13010 PF06956 Regulator of RNA terminal phosphate cyclase COG34_RS13015 PF01139 tRNA-splicing ligase RtcB COG34_RS13030 PF01139 tRNA-splicing ligase RtcB COG34_RS13035 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain COG34_RS13035 PF01137 RNA 3'-terminal phosphate cyclase COG34_RS13040 PF17874 MalT-like TPR region COG34_RS13040 PF00196 Bacterial regulatory proteins, luxR family COG34_RS13045 PF00343 Carbohydrate phosphorylase COG34_RS13050 PF02446 4-alpha-glucanotransferase COG34_RS13055 PF02447 GntP family permease COG34_RS13060 PF01521 Iron-sulphur cluster biosynthesis COG34_RS13060 PF01106 NifU-like domain COG34_RS13065 PF00156 Phosphoribosyl transferase domain COG34_RS13070 PF00561 alpha/beta hydrolase fold COG34_RS13075 PF04754 Putative transposase, YhgA-like COG34_RS13085 PF09012 FeoC like transcriptional regulator COG34_RS13090 PF02421 Ferrous iron transport protein B COG34_RS13090 PF17910 FeoB cytosolic helical domain COG34_RS13090 PF07664 Ferrous iron transport protein B C terminus COG34_RS13090 PF07670 Nucleoside recognition COG34_RS13095 PF04023 FeoA domain COG34_RS13105 PF17674 HHH domain COG34_RS13105 PF09371 Tex-like protein N-terminal domain COG34_RS13105 PF16921 Tex protein YqgF-like domain COG34_RS13105 PF00575 S1 RNA binding domain COG34_RS13110 PF01272 Transcription elongation factor, GreA/GreB, C-term COG34_RS13110 PF03449 Transcription elongation factor, N-terminal COG34_RS13120 PF00072 Response regulator receiver domain COG34_RS13120 PF00486 Transcriptional regulatory protein, C terminal COG34_RS13125 PF00512 His Kinase A (phospho-acceptor) domain COG34_RS13125 PF00672 HAMP domain COG34_RS13125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS13140 PF01293 Phosphoenolpyruvate carboxykinase COG34_RS13150 PF13687 Domain of unknown function (DUF4153) COG34_RS13155 PF01430 Hsp33 protein COG34_RS13160 PF01479 S4 domain COG34_RS13165 PF13419 Haloacid dehalogenase-like hydrolase COG34_RS13170 PF07095 Intracellular growth attenuator protein IgaA COG34_RS13175 PF00293 NUDIX domain COG34_RS13180 PF17092 Penicillin-binding protein OB-like domain COG34_RS13180 PF00905 Penicillin binding protein transpeptidase domain COG34_RS13180 PF00912 Transglycosylase COG34_RS13190 PF05137 Fimbrial assembly protein (PilN) COG34_RS13200 PF10748 DNA utilization proteins HofP COG34_RS13205 PF00263 Bacterial type II and III secretion system protein COG34_RS13205 PF03958 Bacterial type II/III secretion system short domain COG34_RS13215 PF01202 Shikimate kinase COG34_RS13220 PF01761 3-dehydroquinate synthase COG34_RS13225 PF05036 Sporulation related domain COG34_RS13230 PF02086 D12 class N6 adenine-specific DNA methyltransferase COG34_RS13235 PF00834 Ribulose-phosphate 3 epimerase family COG34_RS13240 PF13419 Haloacid dehalogenase-like hydrolase COG34_RS13245 PF00579 tRNA synthetases class I (W and Y) COG34_RS13250 PF14502 Helix-turn-helix domain COG34_RS13250 PF14503 YhfZ C-terminal domain COG34_RS13260 PF01168 Alanine racemase, N-terminal domain COG34_RS13265 PF01676 Metalloenzyme superfamily COG34_RS13270 PF02126 Phosphotriesterase family COG34_RS13275 PF10941 Protein of unknown function DUF2620 COG34_RS13280 PF10797 Protein of unknown function COG34_RS13285 PF00155 Aminotransferase class I and II COG34_RS13290 PF00392 Bacterial regulatory proteins, gntR family COG34_RS13290 PF07702 UTRA domain COG34_RS13295 PF00294 pfkB family carbohydrate kinase COG34_RS13300 PF01261 Xylose isomerase-like TIM barrel COG34_RS13310 PF01380 SIS domain COG34_RS13315 PF13520 Amino acid permease COG34_RS13320 PF13978 Protein of unknown function (DUF4223) COG34_RS13325 PF10414 Sirohaem synthase dimerisation region COG34_RS13325 PF14824 Sirohaem biosynthesis protein central COG34_RS13325 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases COG34_RS13330 PF01226 Formate/nitrite transporter COG34_RS13335 PF13806 Rieske-like [2Fe-2S] domain COG34_RS13340 PF04324 BFD-like [2Fe-2S] binding domain COG34_RS13340 PF01077 Nitrite and sulphite reductase 4Fe-4S domain COG34_RS13340 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain COG34_RS13340 PF18267 Rubredoxin NAD+ reductase C-terminal domain COG34_RS13340 PF07992 Pyridine nucleotide-disulphide oxidoreductase COG34_RS13345 PF07690 Major Facilitator Superfamily COG34_RS13350 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD COG34_RS13355 PF10832 Protein of unknown function (DUF2559) COG34_RS13360 PF02661 Fic/DOC family COG34_RS13365 PF00117 Glutamine amidotransferase class-I COG34_RS13370 PF00202 Aminotransferase class-III COG34_RS13375 PF12805 FUSC-like inner membrane protein yccS COG34_RS13380 PF00027 Cyclic nucleotide-binding domain COG34_RS13380 PF13545 Crp-like helix-turn-helix domain COG34_RS13390 PF02566 OsmC-like protein COG34_RS13395 PF00485 Phosphoribulokinase / Uridine kinase family COG34_RS13400 PF06794 Uncharacterised protein family (UPF0270) COG34_RS13405 PF00561 alpha/beta hydrolase fold COG34_RS13410 PF12848 ABC transporter COG34_RS13410 PF00005 ABC transporter COG34_RS13420 PF02525 Flavodoxin-like fold COG34_RS13425 PF00999 Sodium/hydrogen exchanger family COG34_RS13425 PF02254 TrkA-N domain COG34_RS13430 PF09526 Probable metal-binding protein (DUF2387) COG34_RS13435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase COG34_RS13440 PF04102 SlyX COG34_RS13445 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase COG34_RS13445 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase COG34_RS13450 PF13309 HTH domain COG34_RS13450 PF08348 YheO-like PAS domain COG34_RS13455 PF02635 DsrE/DsrF-like family COG34_RS13460 PF02635 DsrE/DsrF-like family COG34_RS13465 PF04077 DsrH like protein COG34_RS13470 PF00164 Ribosomal protein S12/S23 COG34_RS13475 PF00177 Ribosomal protein S7p/S5e COG34_RS13480 PF00009 Elongation factor Tu GTP binding domain COG34_RS13480 PF03144 Elongation factor Tu domain 2 COG34_RS13480 PF03764 Elongation factor G, domain IV COG34_RS13480 PF00679 Elongation factor G C-terminus COG34_RS13480 PF14492 Elongation Factor G, domain II COG34_RS13485 PF03144 Elongation factor Tu domain 2 COG34_RS13485 PF03143 Elongation factor Tu C-terminal domain COG34_RS13485 PF00009 Elongation factor Tu GTP binding domain COG34_RS13495 PF04324 BFD-like [2Fe-2S] binding domain COG34_RS13500 PF00210 Ferritin-like domain COG34_RS13505 PF01478 Type IV leader peptidase family COG34_RS13515 PF00338 Ribosomal protein S10p/S20e COG34_RS13520 PF00297 Ribosomal protein L3 COG34_RS13525 PF00573 Ribosomal protein L4/L1 family COG34_RS13530 PF00276 Ribosomal protein L23 COG34_RS13535 PF00181 Ribosomal Proteins L2, RNA binding domain COG34_RS13535 PF03947 Ribosomal Proteins L2, C-terminal domain COG34_RS13540 PF00203 Ribosomal protein S19 COG34_RS13545 PF00237 Ribosomal protein L22p/L17e COG34_RS13550 PF07650 KH domain COG34_RS13550 PF00189 Ribosomal protein S3, C-terminal domain COG34_RS13555 PF00252 Ribosomal protein L16p/L10e COG34_RS13560 PF00831 Ribosomal L29 protein COG34_RS13565 PF00366 Ribosomal protein S17 COG34_RS13570 PF00238 Ribosomal protein L14p/L23e COG34_RS13575 PF00467 KOW motif COG34_RS13575 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 COG34_RS13580 PF00673 ribosomal L5P family C-terminus COG34_RS13580 PF00281 Ribosomal protein L5 COG34_RS13585 PF00253 Ribosomal protein S14p/S29e COG34_RS13590 PF00410 Ribosomal protein S8 COG34_RS13595 PF00347 Ribosomal protein L6 COG34_RS13600 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast COG34_RS13605 PF03719 Ribosomal protein S5, C-terminal domain COG34_RS13605 PF00333 Ribosomal protein S5, N-terminal domain COG34_RS13610 PF00327 Ribosomal protein L30p/L7e COG34_RS13615 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A COG34_RS13620 PF00344 SecY translocase COG34_RS13625 PF00444 Ribosomal protein L36 COG34_RS13630 PF00416 Ribosomal protein S13/S18 COG34_RS13635 PF00411 Ribosomal protein S11 COG34_RS13640 PF00163 Ribosomal protein S4/S9 N-terminal domain COG34_RS13640 PF01479 S4 domain COG34_RS13645 PF01000 RNA polymerase Rpb3/RpoA insert domain COG34_RS13645 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain COG34_RS13645 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain COG34_RS13650 PF01196 Ribosomal protein L17 COG34_RS13655 PF09350 Domain of unknown function (DUF1992) COG34_RS13660 PF13411 MerR HTH family regulatory protein COG34_RS13665 PF03889 Alternative ribosome-rescue factor A COG34_RS13670 PF01741 Large-conductance mechanosensitive channel, MscL COG34_RS13675 PF02254 TrkA-N domain COG34_RS13675 PF02080 TrkA-C domain COG34_RS13680 PF01189 16S rRNA methyltransferase RsmB/F COG34_RS13680 PF01029 NusB family COG34_RS13685 PF00551 Formyl transferase COG34_RS13685 PF02911 Formyl transferase, C-terminal domain COG34_RS13690 PF01327 Polypeptide deformylase COG34_RS13695 PF17782 DprA winged helix domain COG34_RS13695 PF02481 DNA recombination-mediator protein A COG34_RS13700 PF04361 Protein of unknown function (DUF494) COG34_RS13705 PF01396 Topoisomerase DNA binding C4 zinc finger COG34_RS13710 PF01300 Telomere recombination COG34_RS13715 PF18317 Shikimate 5'-dehydrogenase C-terminal domain COG34_RS13715 PF08501 Shikimate dehydrogenase substrate binding domain COG34_RS13715 PF01488 Shikimate / quinate 5-dehydrogenase COG34_RS13720 PF07369 Protein of unknown function (DUF1488) COG34_RS13725 PF00132 Bacterial transferase hexapeptide (six repeats) COG34_RS13765 PF00005 ABC transporter COG34_RS13770 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS13775 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS13780 PF00497 Bacterial extracellular solute-binding proteins, family 3 COG34_RS13795 PF00873 AcrB/AcrD/AcrF family COG34_RS13800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion COG34_RS13800 PF00529 HlyD membrane-fusion protein of T1SS COG34_RS13810 PF08361 MAATS-type transcriptional repressor, C-terminal region COG34_RS13810 PF00440 Bacterial regulatory proteins, tetR family COG34_RS13815 PF10831 Protein of unknown function (DUF2556) COG34_RS13820 PF01555 DNA methylase COG34_RS13825 PF02954 Bacterial regulatory protein, Fis family COG34_RS13830 PF01207 Dihydrouridine synthase (Dus) COG34_RS13840 PF00474 Sodium:solute symporter family COG34_RS13845 PF06196 Protein of unknown function (DUF997) COG34_RS13850 PF02785 Biotin carboxylase C-terminal domain COG34_RS13850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain COG34_RS13850 PF00289 Biotin carboxylase, N-terminal domain COG34_RS13855 PF00364 Biotin-requiring enzyme COG34_RS13865 PF00107 Zinc-binding dehydrogenase COG34_RS13865 PF08240 Alcohol dehydrogenase GroES-like domain COG34_RS13870 PF00990 Diguanylate cyclase, GGDEF domain COG34_RS13870 PF17157 Gammaproteobacterial periplasmic sensor domain COG34_RS13870 PF00563 EAL domain COG34_RS13890 PF04085 rod shape-determining protein MreC COG34_RS13895 PF04093 rod shape-determining protein MreD COG34_RS13900 PF02545 Maf-like protein COG34_RS13905 PF00575 S1 RNA binding domain COG34_RS13905 PF10150 Ribonuclease E/G family COG34_RS13910 PF13116 Protein of unknown function COG34_RS13910 PF13502 AsmA-like C-terminal region COG34_RS13915 PF01523 Putative modulator of DNA gyrase COG34_RS13920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS13920 PF03466 LysR substrate binding domain COG34_RS13925 PF07869 Protein of unknown function (DUF1656) COG34_RS13930 PF13533 Biotin-lipoyl like COG34_RS13935 PF04632 Fusaric acid resistance protein family COG34_RS13940 PF01337 Barstar (barnase inhibitor) COG34_RS13945 PF07338 Protein of unknown function (DUF1471) COG34_RS13950 PF01316 Arginine repressor, DNA binding domain COG34_RS13950 PF02863 Arginine repressor, C-terminal domain COG34_RS13955 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain COG34_RS13955 PF00056 lactate/malate dehydrogenase, NAD binding domain COG34_RS13960 PF13180 PDZ domain COG34_RS13965 PF13180 PDZ domain COG34_RS13965 PF00595 PDZ domain COG34_RS13970 PF06295 Protein of unknown function (DUF1043) COG34_RS13975 PF03969 AFG1-like ATPase COG34_RS13980 PF00572 Ribosomal protein L13 COG34_RS13985 PF00380 Ribosomal protein S9/S16 COG34_RS14005 PF02798 Glutathione S-transferase, N-terminal domain COG34_RS14005 PF00043 Glutathione S-transferase, C-terminal domain COG34_RS14010 PF04386 Stringent starvation protein B COG34_RS14015 PF03606 C4-dicarboxylate anaerobic carrier COG34_RS14025 PF07729 FCD domain COG34_RS14025 PF00392 Bacterial regulatory proteins, gntR family COG34_RS14030 PF00701 Dihydrodipicolinate synthetase family COG34_RS14035 PF07690 Major Facilitator Superfamily COG34_RS14040 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase COG34_RS14045 PF00480 ROK family COG34_RS14050 PF04074 YhcH/YjgK/YiaL COG34_RS14055 PF06250 YhcG PDDEXK nuclease domain COG34_RS14055 PF17761 DUF1016 N-terminal domain COG34_RS14060 PF07992 Pyridine nucleotide-disulphide oxidoreductase COG34_RS14060 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster COG34_RS14065 PF01493 GXGXG motif COG34_RS14065 PF04898 Glutamate synthase central domain COG34_RS14065 PF01645 Conserved region in glutamate synthase COG34_RS14065 PF00310 Glutamine amidotransferases class-II COG34_RS14080 PF04055 Radical SAM superfamily COG34_RS14080 PF16199 Radical_SAM C-terminal domain COG34_RS14085 PF00512 His Kinase A (phospho-acceptor) domain COG34_RS14085 PF01627 Hpt domain COG34_RS14085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS14085 PF00989 PAS fold COG34_RS14085 PF00072 Response regulator receiver domain COG34_RS14085 PF18415 Histidine kinase receptor ArcB trans-membrane domain COG34_RS14095 PF00912 Transglycosylase COG34_RS14100 PF10707 PhoP regulatory network protein YrbL COG34_RS14105 PF00381 PTS HPr component phosphorylation site COG34_RS14110 PF03668 P-loop ATPase protein family COG34_RS14115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 COG34_RS14120 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein COG34_RS14125 PF00309 Sigma-54 factor, Activator interacting domain (AID) COG34_RS14125 PF04552 Sigma-54, DNA binding domain COG34_RS14125 PF04963 Sigma-54 factor, core binding domain COG34_RS14130 PF12399 Branched-chain amino acid ATP-binding cassette transporter COG34_RS14130 PF00005 ABC transporter COG34_RS14135 PF03968 OstA-like protein COG34_RS14140 PF06835 Lipopolysaccharide-assembly, LptC-related COG34_RS14150 PF00571 CBS domain COG34_RS14150 PF01380 SIS domain COG34_RS14155 PF01699 Sodium/calcium exchanger protein COG34_RS14160 PF00005 ABC transporter COG34_RS14165 PF02405 Permease MlaE COG34_RS14170 PF02470 MlaD protein COG34_RS14175 PF05494 MlaC protein COG34_RS14180 PF13466 STAS domain COG34_RS14185 PF01722 BolA-like protein COG34_RS14190 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) COG34_RS14195 PF13693 Winged helix-turn-helix DNA-binding COG34_RS14200 PF00348 Polyprenyl synthetase COG34_RS14205 PF00829 Ribosomal prokaryotic L21 protein COG34_RS14210 PF01016 Ribosomal L27 protein COG34_RS14215 PF00892 EamA-like transporter family COG34_RS14220 PF01926 50S ribosome-binding GTPase COG34_RS14220 PF01018 GTP1/OBG COG34_RS14225 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family COG34_RS14230 PF03449 Transcription elongation factor, N-terminal COG34_RS14230 PF01272 Transcription elongation factor, GreA/GreB, C-term COG34_RS14235 PF01985 CRS1 / YhbY (CRM) domain COG34_RS14240 PF01728 FtsJ-like methyltransferase COG34_RS14245 PF00004 ATPase family associated with various cellular activities (AAA) COG34_RS14245 PF17862 AAA+ lid domain COG34_RS14245 PF01434 Peptidase family M41 COG34_RS14245 PF06480 FtsH Extracellular COG34_RS14250 PF00809 Pterin binding enzyme COG34_RS14255 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III COG34_RS14255 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I COG34_RS14255 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain COG34_RS14255 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II COG34_RS14260 PF03840 Preprotein translocase SecG subunit COG34_RS14270 PF00884 Sulfatase COG34_RS14275 PF00764 Arginosuccinate synthase COG34_RS14285 PF02576 RimP N-terminal domain COG34_RS14285 PF17384 RimP C-terminal SH3 domain COG34_RS14290 PF00575 S1 RNA binding domain COG34_RS14290 PF08529 NusA N-terminal domain COG34_RS14290 PF13184 NusA-like KH domain COG34_RS14295 PF08364 Bacterial translation initiation factor IF-2 associated region COG34_RS14295 PF04760 Translation initiation factor IF-2, N-terminal region COG34_RS14295 PF00009 Elongation factor Tu GTP binding domain COG34_RS14295 PF11987 Translation-initiation factor 2 COG34_RS14300 PF02033 Ribosome-binding factor A COG34_RS14305 PF16198 tRNA pseudouridylate synthase B C-terminal domain COG34_RS14305 PF09157 Pseudouridine synthase II TruB, C-terminal COG34_RS14305 PF01509 TruB family pseudouridylate synthase (N terminal domain) COG34_RS14310 PF00312 Ribosomal protein S15 COG34_RS14315 PF01138 3' exoribonuclease family, domain 1 COG34_RS14315 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain COG34_RS14315 PF00013 KH domain COG34_RS14315 PF00575 S1 RNA binding domain COG34_RS14315 PF03725 3' exoribonuclease family, domain 2 COG34_RS14320 PF13181 Tetratricopeptide repeat COG34_RS14320 PF07719 Tetratricopeptide repeat COG34_RS14330 PF00271 Helicase conserved C-terminal domain COG34_RS14330 PF03880 DbpA RNA binding domain COG34_RS14330 PF00270 DEAD/DEAH box helicase COG34_RS14330 PF12343 Cold shock protein DEAD box A COG34_RS14335 PF03222 Tryptophan/tyrosine permease family COG34_RS14345 PF01548 Transposase COG34_RS14345 PF02371 Transposase IS116/IS110/IS902 family COG34_RS14350 PF00296 Luciferase-like monooxygenase COG34_RS14355 PF01136 Peptidase family U32 COG34_RS14360 PF01136 Peptidase family U32 COG34_RS14365 PF02036 SCP-2 sterol transfer family COG34_RS14370 PF13508 Acetyltransferase (GNAT) domain COG34_RS14375 PF01541 GIY-YIG catalytic domain COG34_RS14385 PF01965 DJ-1/PfpI family COG34_RS14390 PF13460 NAD(P)H-binding COG34_RS14395 PF03773 Predicted permease COG34_RS14400 PF04972 BON domain COG34_RS14405 PF13580 SIS domain COG34_RS14410 PF02021 Uncharacterised protein family UPF0102 COG34_RS14415 PF04348 LppC putative lipoprotein COG34_RS14420 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases COG34_RS14425 PF00419 Fimbrial protein COG34_RS14430 PF00577 Outer membrane usher protein COG34_RS14430 PF13953 PapC C-terminal domain COG34_RS14430 PF13954 PapC N-terminal domain COG34_RS14435 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain COG34_RS14435 PF02753 Pili assembly chaperone PapD, C-terminal domain COG34_RS14440 PF00419 Fimbrial protein COG34_RS14445 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase COG34_RS14450 PF03613 PTS system mannose/fructose/sorbose family IID component COG34_RS14455 PF03609 PTS system sorbose-specific iic component COG34_RS14460 PF03830 PTS system sorbose subfamily IIB component COG34_RS14465 PF01116 Fructose-bisphosphate aldolase class-II COG34_RS14470 PF01380 SIS domain COG34_RS14475 PF01979 Amidohydrolase family COG34_RS14480 PF03610 PTS system fructose IIA component COG34_RS14485 PF03613 PTS system mannose/fructose/sorbose family IID component COG34_RS14490 PF03609 PTS system sorbose-specific iic component COG34_RS14495 PF03830 PTS system sorbose subfamily IIB component COG34_RS14500 PF08013 Tagatose 6 phosphate kinase COG34_RS14510 PF00455 DeoR C terminal sensor domain COG34_RS14510 PF08220 DeoR-like helix-turn-helix domain COG34_RS14515 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system COG34_RS14520 PF15937 prlF antitoxin for toxin YhaV_toxin COG34_RS14525 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus COG34_RS14525 PF08666 SAF domain COG34_RS14530 PF07690 Major Facilitator Superfamily COG34_RS14535 PF03328 HpcH/HpaI aldolase/citrate lyase family COG34_RS14540 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase COG34_RS14540 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase COG34_RS14545 PF02595 Glycerate kinase family COG34_RS14570 PF03466 LysR substrate binding domain COG34_RS14570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS14580 PF00291 Pyridoxal-phosphate dependent enzyme COG34_RS14585 PF03222 Tryptophan/tyrosine permease family COG34_RS14590 PF00871 Acetokinase family COG34_RS14595 PF02901 Pyruvate formate lyase-like COG34_RS14595 PF01228 Glycine radical COG34_RS14600 PF01042 Endoribonuclease L-PSP COG34_RS14605 PF03315 Serine dehydratase beta chain COG34_RS14605 PF03313 Serine dehydratase alpha chain COG34_RS14620 PF03313 Serine dehydratase alpha chain COG34_RS14630 PF02678 Pirin COG34_RS14630 PF17954 Quercetinase C-terminal cupin domain COG34_RS14635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS14635 PF03466 LysR substrate binding domain COG34_RS14645 PF05656 Protein of unknown function (DUF805) COG34_RS14650 PF05656 Protein of unknown function (DUF805) COG34_RS14655 PF13409 Glutathione S-transferase, N-terminal domain COG34_RS14660 PF07681 DoxX COG34_RS14665 PF13997 YqjK-like protein COG34_RS14670 PF07332 Putative Actinobacterial Holin-X, holin superfamily III COG34_RS14675 PF05957 Bacterial protein of unknown function (DUF883) COG34_RS14680 PF06476 Protein of unknown function (DUF1090) COG34_RS14685 PF13721 SecD export protein N-terminal TM region COG34_RS14690 PF09335 SNARE associated Golgi protein COG34_RS14695 PF07729 FCD domain COG34_RS14695 PF00392 Bacterial regulatory proteins, gntR family COG34_RS14710 PF04449 CS1 type fimbrial major subunit COG34_RS14715 PF16967 E-set like domain COG34_RS14715 PF15976 CS1-pili formation C-terminal COG34_RS14715 PF17271 TcfC Usher-like barrel domain COG34_RS14725 PF07690 Major Facilitator Superfamily COG34_RS14730 PF02614 Glucuronate isomerase COG34_RS14735 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus COG34_RS14735 PF08666 SAF domain COG34_RS14740 PF10688 Bacterial inner membrane protein COG34_RS14745 PF00375 Sodium:dicarboxylate symporter family COG34_RS14755 PF03741 Integral membrane protein TerC family COG34_RS14760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold COG34_RS14765 PF02698 DUF218 domain COG34_RS14770 PF01863 Protein of unknown function DUF45 COG34_RS14775 PF05175 Methyltransferase small domain COG34_RS14780 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system COG34_RS14785 PF01381 Helix-turn-helix COG34_RS14790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family COG34_RS14790 PF07992 Pyridine nucleotide-disulphide oxidoreductase COG34_RS14795 PF01204 Trehalase COG34_RS14805 PF13520 Amino acid permease COG34_RS14810 PF04074 YhcH/YjgK/YiaL COG34_RS14815 PF00703 Glycosyl hydrolases family 2 COG34_RS14815 PF02837 Glycosyl hydrolases family 2, sugar binding domain COG34_RS14815 PF02836 Glycosyl hydrolases family 2, TIM barrel domain COG34_RS14815 PF16353 Domain of unknown function(DUF4981) COG34_RS14815 PF02929 Beta galactosidase small chain COG34_RS14820 PF00356 Bacterial regulatory proteins, lacI family COG34_RS14830 PF01588 Putative tRNA binding domain COG34_RS14835 PF00202 Aminotransferase class-III COG34_RS14845 PF08447 PAS fold COG34_RS14845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain COG34_RS14850 PF03551 Transcriptional regulator PadR-like family COG34_RS14855 PF08021 Siderophore-interacting FAD-binding domain COG34_RS14855 PF04954 Siderophore-interacting protein COG34_RS14865 PF03167 Uracil DNA glycosylase superfamily COG34_RS14870 PF04545 Sigma-70, region 4 COG34_RS14870 PF04542 Sigma-70 region 2 COG34_RS14870 PF00140 Sigma-70 factor, region 1.2 COG34_RS14870 PF03979 Sigma-70 factor, region 1.1 COG34_RS14870 PF04539 Sigma-70 region 3 COG34_RS14870 PF04546 Sigma-70, non-essential region COG34_RS14880 PF08275 DNA primase catalytic core, N-terminal domain COG34_RS14880 PF10410 DnaB-helicase binding domain of primase COG34_RS14880 PF08278 DNA primase DnaG DnaB-binding COG34_RS14880 PF01807 CHC2 zinc finger COG34_RS14885 PF01165 Ribosomal protein S21 COG34_RS14890 PF00814 Glycoprotease family COG34_RS14895 PF00939 Sodium:sulfate symporter transmembrane region COG34_RS14900 PF05683 Fumarase C-terminus COG34_RS14905 PF05681 Fumarate hydratase (Fumerase) COG34_RS14915 PF03466 LysR substrate binding domain COG34_RS14915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS14920 PF02660 Glycerol-3-phosphate acyltransferase COG34_RS14925 PF02152 Dihydroneopterin aldolase COG34_RS14930 PF02673 Bacitracin resistance protein BacA COG34_RS14935 PF12627 Probable RNA and SrmB- binding site of polymerase A COG34_RS14935 PF01743 Poly A polymerase head domain COG34_RS14935 PF01966 HD domain COG34_RS14940 PF08239 Bacterial SH3 domain COG34_RS14950 PF01928 CYTH domain COG34_RS14955 PF03710 Glutamate-ammonia ligase adenylyltransferase COG34_RS14955 PF08335 GlnD PII-uridylyltransferase COG34_RS14960 PF01467 Cytidylyltransferase-like COG34_RS14960 PF00294 pfkB family carbohydrate kinase COG34_RS14970 PF01145 SPFH domain / Band 7 family COG34_RS14970 PF15975 Flotillin COG34_RS14975 PF07290 Protein of unknown function (DUF1449) COG34_RS14980 PF08971 Glycogen synthesis protein COG34_RS14990 PF02753 Pili assembly chaperone PapD, C-terminal domain COG34_RS14990 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain COG34_RS14995 PF13954 PapC N-terminal domain COG34_RS14995 PF00577 Outer membrane usher protein COG34_RS14995 PF13953 PapC C-terminal domain COG34_RS15000 PF00419 Fimbrial protein COG34_RS15005 PF04380 Membrane fusogenic activity COG34_RS15010 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase COG34_RS15020 PF02535 ZIP Zinc transporter COG34_RS15025 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase COG34_RS15030 PF03738 Glutathionylspermidine synthase preATP-grasp COG34_RS15035 PF06693 Protein of unknown function (DUF1190) COG34_RS15045 PF02321 Outer membrane efflux protein COG34_RS15050 PF00293 NUDIX domain COG34_RS15055 PF06853 Protein of unknown function (DUF1249) COG34_RS15060 PF00149 Calcineurin-like phosphoesterase COG34_RS15065 PF05728 Uncharacterised protein family (UPF0227) COG34_RS15070 PF00204 DNA gyrase B COG34_RS15070 PF00986 DNA gyrase B subunit, carboxyl terminus COG34_RS15070 PF01751 Toprim domain COG34_RS15070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS15090 PF00294 pfkB family carbohydrate kinase COG34_RS15120 PF03992 Antibiotic biosynthesis monooxygenase COG34_RS15125 PF02525 Flavodoxin-like fold COG34_RS15130 PF10840 Protein of unknown function (DUF2645) COG34_RS15135 PF08521 Two-component sensor kinase N-terminal COG34_RS15135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS15135 PF00512 His Kinase A (phospho-acceptor) domain COG34_RS15140 PF00486 Transcriptional regulatory protein, C terminal COG34_RS15140 PF00072 Response regulator receiver domain COG34_RS15145 PF04076 Bacterial OB fold (BOF) protein COG34_RS15150 PF06445 GyrI-like small molecule binding domain COG34_RS15160 PF00521 DNA gyrase/topoisomerase IV, subunit A COG34_RS15160 PF03989 DNA gyrase C-terminal domain, beta-propeller COG34_RS15165 PF01553 Acyltransferase COG34_RS15170 PF07732 Multicopper oxidase COG34_RS15170 PF07731 Multicopper oxidase COG34_RS15170 PF00394 Multicopper oxidase COG34_RS15175 PF11842 Domain of unknown function (DUF3362) COG34_RS15175 PF08497 Radical SAM N-terminal COG34_RS15175 PF04055 Radical SAM superfamily COG34_RS15180 PF04728 Lipoprotein leucine-zipper COG34_RS15185 PF12883 Protein of unknown function (DUF3828) COG34_RS15190 PF00248 Aldo/keto reductase family COG34_RS15195 PF00465 Iron-containing alcohol dehydrogenase COG34_RS15200 PF06719 AraC-type transcriptional regulator N-terminus COG34_RS15200 PF12833 Helix-turn-helix domain COG34_RS15205 PF09335 SNARE associated Golgi protein COG34_RS15210 PF01053 Cys/Met metabolism PLP-dependent enzyme COG34_RS15220 PF01618 MotA/TolQ/ExbB proton channel family COG34_RS15225 PF02472 Biopolymer transport protein ExbD/TolR COG34_RS15235 PF01548 Transposase COG34_RS15235 PF02371 Transposase IS116/IS110/IS902 family COG34_RS15245 PF03350 Uncharacterized protein family, UPF0114 COG34_RS15250 PF00248 Aldo/keto reductase family COG34_RS15255 PF01738 Dienelactone hydrolase family COG34_RS15260 PF11115 Protein of unknown function (DUF2623) COG34_RS15270 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit COG34_RS15270 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal COG34_RS15275 PF13247 4Fe-4S dicluster domain COG34_RS15280 PF03916 Polysulphide reductase, NrfD COG34_RS15285 PF00374 Nickel-dependent hydrogenase COG34_RS15290 PF01750 Hydrogenase maturation protease COG34_RS15295 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE COG34_RS15300 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA COG34_RS15305 PF01455 HupF/HypC family COG34_RS15310 PF02371 Transposase IS116/IS110/IS902 family COG34_RS15310 PF01548 Transposase COG34_RS15320 PF02798 Glutathione S-transferase, N-terminal domain COG34_RS15325 PF05257 CHAP domain COG34_RS15325 PF03738 Glutathionylspermidine synthase preATP-grasp COG34_RS15330 PF01384 Phosphate transporter family COG34_RS15350 PF01943 Polysaccharide biosynthesis protein COG34_RS15360 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) COG34_RS15365 PF03739 Lipopolysaccharide export system permease LptF/LptG COG34_RS15375 PF00155 Aminotransferase class I and II COG34_RS15380 PF00550 Phosphopantetheine attachment site COG34_RS15390 PF00501 AMP-binding enzyme COG34_RS15390 PF14535 AMP-binding enzyme C-terminal domain COG34_RS15405 PF00392 Bacterial regulatory proteins, gntR family COG34_RS15405 PF07729 FCD domain COG34_RS15410 PF02913 FAD linked oxidases, C-terminal domain COG34_RS15410 PF01565 FAD binding domain COG34_RS15415 PF01565 FAD binding domain COG34_RS15420 PF13183 4Fe-4S dicluster domain COG34_RS15420 PF02754 Cysteine-rich domain COG34_RS15425 PF03928 Haem-degrading COG34_RS15430 PF01274 Malate synthase COG34_RS15435 PF02652 L-lactate permease COG34_RS15445 PF17291 N-terminal domain of M60-like peptidases COG34_RS15445 PF13402 Peptidase M60, enhancin and enhancin-like COG34_RS15445 PF13322 Domain of unknown function (DUF4092) COG34_RS15450 PF01478 Type IV leader peptidase family COG34_RS15450 PF06750 Bacterial Peptidase A24 N-terminal domain COG34_RS15455 PF16549 Type II secretion system (T2SS) pilotin, S protein COG34_RS15460 PF11356 Type II secretion system protein C COG34_RS15465 PF00263 Bacterial type II and III secretion system protein COG34_RS15465 PF03958 Bacterial type II/III secretion system short domain COG34_RS15470 PF00437 Type II/IV secretion system protein COG34_RS15480 PF08334 Type II secretion system (T2SS), protein G COG34_RS15480 PF07963 Prokaryotic N-terminal methylation motif COG34_RS15485 PF12019 Type II transport protein GspH COG34_RS15490 PF02501 Type II secretion system (T2SS), protein I COG34_RS15490 PF07963 Prokaryotic N-terminal methylation motif COG34_RS15495 PF07963 Prokaryotic N-terminal methylation motif COG34_RS15495 PF11612 Type II secretion system (T2SS), protein J COG34_RS15500 PF03934 Type II secretion system (T2SS), protein K COG34_RS15505 PF12693 GspL periplasmic domain COG34_RS15510 PF04612 Type II secretion system (T2SS), protein M COG34_RS15520 PF04474 Protein of unknown function (DUF554) COG34_RS15530 PF01276 Orn/Lys/Arg decarboxylase, major domain COG34_RS15530 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain COG34_RS15530 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain COG34_RS15535 PF03825 Nucleoside H+ symporter COG34_RS15540 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain COG34_RS15540 PF01464 Transglycosylase SLT domain COG34_RS15545 PF04362 Bacterial Fe(2+) trafficking COG34_RS15550 PF00633 Helix-hairpin-helix motif COG34_RS15550 PF14815 NUDIX domain COG34_RS15550 PF10576 Iron-sulfur binding domain of endonuclease III COG34_RS15550 PF00730 HhH-GPD superfamily base excision DNA repair protein COG34_RS15560 PF02390 Putative methyltransferase COG34_RS15565 PF04320 Protein with unknown function (DUF469) COG34_RS15570 PF11101 Protein of unknown function (DUF2884) COG34_RS15575 PF17763 Glutaminase/Asparaginase C-terminal domain COG34_RS15575 PF00710 Asparaginase, N-terminal COG34_RS15580 PF06717 Protein of unknown function (DUF1202) COG34_RS15585 PF06969 HemN C-terminal domain COG34_RS15585 PF04055 Radical SAM superfamily COG34_RS15590 PF01725 Ham1 family COG34_RS15595 PF02594 Uncharacterised ACR, YggU family COG1872 COG34_RS15600 PF02325 YGGT family COG34_RS15605 PF01168 Alanine racemase, N-terminal domain COG34_RS15610 PF00437 Type II/IV secretion system protein COG34_RS15620 PF02371 Transposase IS116/IS110/IS902 family COG34_RS15620 PF01548 Transposase COG34_RS15625 PF03652 Holliday junction resolvase COG34_RS15630 PF02622 Uncharacterized ACR, COG1678 COG34_RS15635 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain COG34_RS15635 PF02951 Prokaryotic glutathione synthetase, N-terminal domain COG34_RS15640 PF04452 RNA methyltransferase COG34_RS15645 PF04231 Endonuclease I COG34_RS15650 PF17283 SprT-like zinc ribbon domain COG34_RS15650 PF10263 SprT-like family COG34_RS15655 PF00083 Sugar (and other) transporter COG34_RS15660 PF00438 S-adenosylmethionine synthetase, N-terminal domain COG34_RS15660 PF02772 S-adenosylmethionine synthetase, central domain COG34_RS15660 PF02773 S-adenosylmethionine synthetase, C-terminal domain COG34_RS15670 PF17430 Uncharacterized YqgC-like COG34_RS15675 PF11036 Virulence promoting factor COG34_RS15680 PF17944 Arginine decarboxylase C-terminal helical extension COG34_RS15680 PF17810 Arginine decarboxylase helical bundle domain COG34_RS15680 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain COG34_RS15690 PF00491 Arginase family COG34_RS15695 PF01435 Peptidase family M48 COG34_RS15700 PF02779 Transketolase, pyrimidine binding domain COG34_RS15700 PF02780 Transketolase, C-terminal domain COG34_RS15700 PF00456 Transketolase, thiamine diphosphate binding domain COG34_RS15705 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 COG34_RS15710 PF02378 Phosphotransferase system, EIIC COG34_RS15710 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit COG34_RS15715 PF08240 Alcohol dehydrogenase GroES-like domain COG34_RS15715 PF00107 Zinc-binding dehydrogenase COG34_RS15720 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded COG34_RS15725 PF05068 Mannitol repressor COG34_RS15735 PF00005 ABC transporter COG34_RS15740 PF00005 ABC transporter COG34_RS15765 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain COG34_RS15765 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain COG34_RS15770 PF00162 Phosphoglycerate kinase COG34_RS15775 PF01116 Fructose-bisphosphate aldolase class-II COG34_RS15785 PF00924 Mechanosensitive ion channel COG34_RS15785 PF05552 Conserved TM helix COG34_RS15790 PF01810 LysE type translocator COG34_RS15795 PF04402 Protein of unknown function (DUF541) COG34_RS15800 PF03466 LysR substrate binding domain COG34_RS15800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS15805 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain COG34_RS15805 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain COG34_RS15820 PF02310 B12 binding domain COG34_RS15820 PF01642 Methylmalonyl-CoA mutase COG34_RS15825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS15825 PF03466 LysR substrate binding domain COG34_RS15830 PF03466 LysR substrate binding domain COG34_RS15835 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) COG34_RS15840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain COG34_RS15840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain COG34_RS15840 PF01842 ACT domain COG34_RS15855 PF01812 5-formyltetrahydrofolate cyclo-ligase family COG34_RS15865 PF05164 Cell division protein ZapA COG34_RS15875 PF03695 Uncharacterised protein family (UPF0149) COG34_RS15880 PF00557 Metallopeptidase family M24 COG34_RS15880 PF05195 Aminopeptidase P, N-terminal domain COG34_RS15885 PF01494 FAD binding domain COG34_RS15890 PF01494 FAD binding domain COG34_RS15895 PF01571 Aminomethyltransferase folate-binding domain COG34_RS15895 PF08669 Glycine cleavage T-protein C-terminal barrel domain COG34_RS15900 PF01597 Glycine cleavage H-protein COG34_RS15905 PF02347 Glycine cleavage system P-protein COG34_RS15915 PF00232 Glycosyl hydrolase family 1 COG34_RS15920 PF04266 ASCH domain COG34_RS15925 PF03006 Haemolysin-III related COG34_RS15930 PF01571 Aminomethyltransferase folate-binding domain COG34_RS15935 PF03937 Flavinator of succinate dehydrogenase COG34_RS15940 PF07254 Membrane-bound toxin component of toxin-antitoxin system COG34_RS15945 PF00258 Flavodoxin COG34_RS15950 PF02899 Phage integrase, N-terminal SAM-like domain COG34_RS15950 PF00589 Phage integrase family COG34_RS15955 PF10411 Disulfide bond isomerase protein N-terminus COG34_RS15955 PF13098 Thioredoxin-like domain COG34_RS15960 PF02272 DHHA1 domain COG34_RS15960 PF01368 DHH family COG34_RS15960 PF17768 RecJ OB domain COG34_RS15970 PF01336 OB-fold nucleic acid binding domain COG34_RS15970 PF00152 tRNA synthetases class II (D, K and N) COG34_RS15975 PF00293 NUDIX domain COG34_RS15985 PF00860 Permease family COG34_RS15995 PF07992 Pyridine nucleotide-disulphide oxidoreductase COG34_RS15995 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster COG34_RS15995 PF13247 4Fe-4S dicluster domain COG34_RS16000 PF13247 4Fe-4S dicluster domain COG34_RS16005 PF00860 Permease family COG34_RS16010 PF01979 Amidohydrolase family COG34_RS16015 PF00860 Permease family COG34_RS16020 PF01799 [2Fe-2S] binding domain COG34_RS16020 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase COG34_RS16020 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain COG34_RS16025 PF00941 FAD binding domain in molybdopterin dehydrogenase COG34_RS16030 PF01979 Amidohydrolase family COG34_RS16035 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster COG34_RS16035 PF07992 Pyridine nucleotide-disulphide oxidoreductase COG34_RS16040 PF12804 MobA-like NTP transferase domain COG34_RS16050 PF02625 XdhC and CoxI family COG34_RS16050 PF13478 XdhC Rossmann domain COG34_RS16055 PF00696 Amino acid kinase family COG34_RS16060 PF01979 Amidohydrolase family COG34_RS16065 PF07687 Peptidase dimerisation domain COG34_RS16065 PF01546 Peptidase family M20/M25/M40 COG34_RS16070 PF00291 Pyridoxal-phosphate dependent enzyme COG34_RS16075 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain COG34_RS16075 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain COG34_RS16080 PF13188 PAS domain COG34_RS16080 PF00158 Sigma-54 interaction domain COG34_RS16080 PF02954 Bacterial regulatory protein, Fis family COG34_RS16085 PF01799 [2Fe-2S] binding domain COG34_RS16085 PF00111 2Fe-2S iron-sulfur cluster binding domain COG34_RS16090 PF03450 CO dehydrogenase flavoprotein C-terminal domain COG34_RS16090 PF00941 FAD binding domain in molybdopterin dehydrogenase COG34_RS16095 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase COG34_RS16095 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain COG34_RS16105 PF01476 LysM domain COG34_RS16105 PF01551 Peptidase family M23 COG34_RS16125 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term COG34_RS16135 PF01313 Bacterial export proteins, family 3 COG34_RS16140 PF01311 Bacterial export proteins, family 1 COG34_RS16145 PF01312 FlhB HrpN YscU SpaS Family COG34_RS16150 PF01312 FlhB HrpN YscU SpaS Family COG34_RS16165 PF09480 Type III secretion system protein PrgH-EprH (PrgH) COG34_RS16170 PF09480 Type III secretion system protein PrgH-EprH (PrgH) COG34_RS16190 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) COG34_RS16205 PF00072 Response regulator receiver domain COG34_RS16205 PF00196 Bacterial regulatory proteins, luxR family COG34_RS16210 PF00072 Response regulator receiver domain COG34_RS16210 PF00196 Bacterial regulatory proteins, luxR family COG34_RS16215 PF01464 Transglycosylase SLT domain COG34_RS16225 PF00486 Transcriptional regulatory protein, C terminal COG34_RS16230 PF07720 Tetratricopeptide repeat COG34_RS16260 PF00486 Transcriptional regulatory protein, C terminal COG34_RS16265 PF00196 Bacterial regulatory proteins, luxR family COG34_RS16270 PF03222 Tryptophan/tyrosine permease family COG34_RS16275 PF00108 Thiolase, N-terminal domain COG34_RS16275 PF02803 Thiolase, C-terminal domain COG34_RS16280 PF04962 KduI/IolB family COG34_RS16290 PF00083 Sugar (and other) transporter COG34_RS16295 PF01177 Asp/Glu/Hydantoin racemase COG34_RS16300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS16300 PF03466 LysR substrate binding domain COG34_RS16305 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain COG34_RS16305 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain COG34_RS16310 PF00356 Bacterial regulatory proteins, lacI family COG34_RS16315 PF00501 AMP-binding enzyme COG34_RS16315 PF01553 Acyltransferase COG34_RS16320 PF07690 Major Facilitator Superfamily COG34_RS16325 PF00248 Aldo/keto reductase family COG34_RS16330 PF06004 Bacterial protein of unknown function (DUF903) COG34_RS16335 PF03741 Integral membrane protein TerC family COG34_RS16340 PF02976 DNA mismatch repair enzyme MutH COG34_RS16345 PF00293 NUDIX domain COG34_RS16350 PF05524 PEP-utilising enzyme, N-terminal COG34_RS16350 PF02896 PEP-utilising enzyme, TIM barrel domain COG34_RS16350 PF00391 PEP-utilising enzyme, mobile domain COG34_RS16350 PF01590 GAF domain COG34_RS16355 PF01790 Prolipoprotein diacylglyceryl transferase COG34_RS16360 PF00303 Thymidylate synthase COG34_RS16365 PF07963 Prokaryotic N-terminal methylation motif COG34_RS16370 PF07963 Prokaryotic N-terminal methylation motif COG34_RS16375 PF10713 Protein of unknown function (DUF2509) COG34_RS16380 PF12528 Type II secretion prepilin peptidase dependent protein C COG34_RS16380 PF07963 Prokaryotic N-terminal methylation motif COG34_RS16385 PF17946 RecC C-terminal domain COG34_RS16390 PF05193 Peptidase M16 inactive domain COG34_RS16390 PF00675 Insulinase (Peptidase family M16) COG34_RS16390 PF16187 Middle or third domain of peptidase_M16 COG34_RS16395 PF00580 UvrD/REP helicase N-terminal domain COG34_RS16395 PF12705 PD-(D/E)XK nuclease superfamily COG34_RS16395 PF13361 UvrD-like helicase C-terminal domain COG34_RS16400 PF13538 UvrD-like helicase C-terminal domain COG34_RS16405 PF00583 Acetyltransferase (GNAT) family COG34_RS16405 PF00696 Amino acid kinase family COG34_RS16410 PF01520 N-acetylmuramoyl-L-alanine amidase COG34_RS16410 PF11741 AMIN domain COG34_RS16435 PF06725 3D domain COG34_RS16435 PF03562 MltA specific insert domain COG34_RS16440 PF00899 ThiF family COG34_RS16445 PF02657 Fe-S metabolism associated domain COG34_RS16450 PF00266 Aminotransferase class-V COG34_RS16455 PF06004 Bacterial protein of unknown function (DUF903) COG34_RS16460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS16460 PF03466 LysR substrate binding domain COG34_RS16465 PF04241 Protein of unknown function (DUF423) COG34_RS16470 PF18125 RlmM ferredoxin-like domain COG34_RS16470 PF01728 FtsJ-like methyltransferase COG34_RS16475 PF00455 DeoR C terminal sensor domain COG34_RS16475 PF08220 DeoR-like helix-turn-helix domain COG34_RS16480 PF05025 RbsD / FucU transport protein family COG34_RS16485 PF00370 FGGY family of carbohydrate kinases, N-terminal domain COG34_RS16485 PF02782 FGGY family of carbohydrate kinases, C-terminal domain COG34_RS16490 PF07881 L-fucose isomerase, first N-terminal domain COG34_RS16490 PF02952 L-fucose isomerase, C-terminal domain COG34_RS16490 PF07882 L-fucose isomerase, second N-terminal domain COG34_RS16495 PF07690 Major Facilitator Superfamily COG34_RS16500 PF00596 Class II Aldolase and Adducin N-terminal domain COG34_RS16505 PF00465 Iron-containing alcohol dehydrogenase COG34_RS16510 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain COG34_RS16510 PF01367 5'-3' exonuclease, C-terminal SAM fold COG34_RS16515 PF03315 Serine dehydratase beta chain COG34_RS16515 PF03313 Serine dehydratase alpha chain COG34_RS16525 PF11892 Domain of unknown function (DUF3412) COG34_RS16525 PF03641 Possible lysine decarboxylase COG34_RS16525 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases COG34_RS16530 PF14489 QueF-like protein COG34_RS16530 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term COG34_RS16535 PF07348 Syd protein (SUKH-2) COG34_RS16540 PF04287 tRNA pseudouridine synthase C COG34_RS16545 PF00849 RNA pseudouridylate synthase COG34_RS16550 PF00258 Flavodoxin COG34_RS16555 PF07690 Major Facilitator Superfamily COG34_RS16560 PF13378 Enolase C-terminal domain-like COG34_RS16560 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain COG34_RS16565 PF13378 Enolase C-terminal domain-like COG34_RS16590 PF05958 tRNA (Uracil-5-)-methyltransferase COG34_RS16590 PF01938 TRAM domain COG34_RS16595 PF13291 ACT domain COG34_RS16595 PF04607 Region found in RelA / SpoT proteins COG34_RS16595 PF02824 TGS domain COG34_RS16600 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin COG34_RS16605 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system COG34_RS16610 PF03819 MazG nucleotide pyrophosphohydrolase domain COG34_RS16615 PF06418 CTP synthase N-terminus COG34_RS16615 PF00117 Glutamine amidotransferase class-I COG34_RS16620 PF03952 Enolase, N-terminal domain COG34_RS16620 PF00113 Enolase, C-terminal TIM barrel domain COG34_RS16630 PF04536 TPM domain COG34_RS16640 PF04055 Radical SAM superfamily COG34_RS16650 PF01242 6-pyruvoyl tetrahydropterin synthase COG34_RS16655 PF00258 Flavodoxin COG34_RS16655 PF00175 Oxidoreductase NAD-binding domain COG34_RS16655 PF00667 FAD binding domain COG34_RS16660 PF01077 Nitrite and sulphite reductase 4Fe-4S domain COG34_RS16660 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain COG34_RS16665 PF01507 Phosphoadenosine phosphosulfate reductase family COG34_RS16675 PF01848 Hok/gef family COG34_RS16680 PF00270 DEAD/DEAH box helicase COG34_RS16680 PF00271 Helicase conserved C-terminal domain COG34_RS16680 PF18019 HD domain COG34_RS16685 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) COG34_RS16695 PF09344 CT1975-like protein COG34_RS16700 PF09704 CRISPR-associated protein (Cas_Cas5) COG34_RS16710 PF01867 CRISPR associated protein Cas1 COG34_RS16715 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) COG34_RS16720 PF04389 Peptidase family M28 COG34_RS16725 PF01507 Phosphoadenosine phosphosulfate reductase family COG34_RS16730 PF00009 Elongation factor Tu GTP binding domain COG34_RS16740 PF12084 Protein of unknown function (DUF3561) COG34_RS16745 PF04977 Septum formation initiator COG34_RS16750 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase COG34_RS16755 PF02542 YgbB family COG34_RS16760 PF01142 tRNA pseudouridine synthase D (TruD) COG34_RS16765 PF01975 Survival protein SurE COG34_RS16775 PF01551 Peptidase family M23 COG34_RS16775 PF01476 LysM domain COG34_RS16780 PF04545 Sigma-70, region 4 COG34_RS16780 PF04539 Sigma-70 region 3 COG34_RS16780 PF04542 Sigma-70 region 2 COG34_RS16780 PF00140 Sigma-70 factor, region 1.2 COG34_RS16785 PF01047 MarR family COG34_RS16790 PF02441 Flavoprotein COG34_RS16795 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase COG34_RS16805 PF02447 GntP family permease COG34_RS16810 PF01261 Xylose isomerase-like TIM barrel COG34_RS16815 PF00596 Class II Aldolase and Adducin N-terminal domain COG34_RS16820 PF07005 Sugar-binding N-terminal domain COG34_RS16820 PF17042 Nucleotide-binding C-terminal domain COG34_RS16825 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase COG34_RS16825 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase COG34_RS16830 PF08220 DeoR-like helix-turn-helix domain COG34_RS16830 PF00455 DeoR C terminal sensor domain COG34_RS16835 PF00149 Calcineurin-like phosphoesterase COG34_RS16840 PF01624 MutS domain I COG34_RS16840 PF05188 MutS domain II COG34_RS16840 PF05192 MutS domain III COG34_RS16840 PF05190 MutS family domain IV COG34_RS16840 PF00488 MutS domain V COG34_RS16850 PF11756 Nitrous oxide-stimulated promoter COG34_RS16855 PF01590 GAF domain COG34_RS16855 PF00158 Sigma-54 interaction domain COG34_RS16860 PF00586 AIR synthase related protein, N-terminal domain COG34_RS16860 PF02769 AIR synthase related protein, C-terminal domain COG34_RS16865 PF01924 Hydrogenase formation hypA family COG34_RS16870 PF01455 HupF/HypC family COG34_RS16875 PF02492 CobW/HypB/UreG, nucleotide-binding domain COG34_RS16880 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA COG34_RS16885 PF11046 Transcriptional repressor of hyc and hyp operons COG34_RS16890 PF13247 4Fe-4S dicluster domain COG34_RS16895 PF00361 Proton-conducting membrane transporter COG34_RS16900 PF00146 NADH dehydrogenase COG34_RS16905 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit COG34_RS16905 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit COG34_RS16905 PF00374 Nickel-dependent hydrogenase COG34_RS16910 PF12838 4Fe-4S dicluster domain COG34_RS16915 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit COG34_RS16920 PF07450 Formate hydrogenlyase maturation protein HycH COG34_RS16925 PF01750 Hydrogenase maturation protease COG34_RS16930 PF00232 Glycosyl hydrolase family 1 COG34_RS16935 PF00367 phosphotransferase system, EIIB COG34_RS16935 PF02378 Phosphotransferase system, EIIC COG34_RS16940 PF00356 Bacterial regulatory proteins, lacI family COG34_RS16945 PF13247 4Fe-4S dicluster domain COG34_RS16945 PF12800 4Fe-4S binding domain COG34_RS16950 PF00708 Acylphosphatase COG34_RS16950 PF17788 HypF Kae1-like domain COG34_RS16950 PF07503 HypF finger COG34_RS16950 PF01300 Telomere recombination COG34_RS16955 PF18113 Rubredoxin binding C-terminal domain COG34_RS16955 PF07992 Pyridine nucleotide-disulphide oxidoreductase COG34_RS16960 PF00301 Rubredoxin COG34_RS16960 PF00258 Flavodoxin COG34_RS16960 PF00753 Metallo-beta-lactamase superfamily COG34_RS16965 PF00158 Sigma-54 interaction domain COG34_RS16965 PF01590 GAF domain COG34_RS16970 PF01380 SIS domain COG34_RS16970 PF00571 CBS domain COG34_RS16975 PF08220 DeoR-like helix-turn-helix domain COG34_RS16975 PF00455 DeoR C terminal sensor domain COG34_RS16980 PF06923 Glucitol operon activator protein (GutM) COG34_RS16985 PF00106 short chain dehydrogenase COG34_RS16990 PF03829 PTS system glucitol/sorbitol-specific IIA component COG34_RS16995 PF03612 Sorbitol phosphotransferase enzyme II N-terminus COG34_RS16995 PF07663 Sorbitol phosphotransferase enzyme II C-terminus COG34_RS17000 PF03608 PTS system enzyme II sorbitol-specific factor COG34_RS17005 PF13406 Transglycosylase SLT domain COG34_RS17010 PF02464 Competence-damaged protein COG34_RS17015 PF00154 recA bacterial DNA recombination protein COG34_RS17020 PF02631 RecX family COG34_RS17025 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain COG34_RS17025 PF01411 tRNA synthetases class II (A) COG34_RS17025 PF02272 DHHA1 domain COG34_RS17030 PF02599 Global regulator protein family COG34_RS17060 PF13419 Haloacid dehalogenase-like hydrolase COG34_RS17065 PF09335 SNARE associated Golgi protein COG34_RS17070 PF04262 Glutamate-cysteine ligase COG34_RS17075 PF02664 S-Ribosylhomocysteinase (LuxS) COG34_RS17080 PF07690 Major Facilitator Superfamily COG34_RS17085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion COG34_RS17085 PF00529 HlyD membrane-fusion protein of T1SS COG34_RS17090 PF01047 MarR family COG34_RS17095 PF05437 Branched-chain amino acid transport protein (AzlD) COG34_RS17100 PF03591 AzlC protein COG34_RS17105 PF07690 Major Facilitator Superfamily COG34_RS17110 PF04069 Substrate binding domain of ABC-type glycine betaine transport system COG34_RS17115 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS17120 PF00005 ABC transporter COG34_RS17120 PF00571 CBS domain COG34_RS17125 PF00268 Ribonucleotide reductase, small chain COG34_RS17130 PF08343 Ribonucleotide reductase N-terminal COG34_RS17130 PF00317 Ribonucleotide reductase, all-alpha domain COG34_RS17130 PF02867 Ribonucleotide reductase, barrel domain COG34_RS17135 PF07972 NrdI Flavodoxin like COG34_RS17140 PF00462 Glutaredoxin COG34_RS17145 PF05957 Bacterial protein of unknown function (DUF883) COG34_RS17150 PF09400 Protein of unknown function (DUF2002) COG34_RS17155 PF06610 L-alanine exporter COG34_RS17160 PF00816 H-NS histone family COG34_RS17165 PF11127 Protein of unknown function (DUF2892) COG34_RS17165 PF00581 Rhodanese-like domain COG34_RS17170 PF01022 Bacterial regulatory protein, arsR family COG34_RS17175 PF01679 Proteolipid membrane potential modulator COG34_RS17180 PF04972 BON domain COG34_RS17180 PF01476 LysM domain COG34_RS17185 PF07729 FCD domain COG34_RS17185 PF00392 Bacterial regulatory proteins, gntR family COG34_RS17190 PF00324 Amino acid permease COG34_RS17195 PF00202 Aminotransferase class-III COG34_RS17200 PF00171 Aldehyde dehydrogenase family COG34_RS17205 PF01266 FAD dependent oxidoreductase COG34_RS17210 PF08943 CsiD COG34_RS17225 PF17612 Family of unknown function (DUF5507) COG34_RS17230 PF17621 Family of unknown function (DUF5508) COG34_RS17250 PF03212 Pertactin COG34_RS17250 PF16168 Adhesin of bacterial autotransporter system, probable stalk COG34_RS17250 PF03797 Autotransporter beta-domain COG34_RS17260 PF01926 50S ribosome-binding GTPase COG34_RS17265 PF05930 Prophage CP4-57 regulatory protein (AlpA) COG34_RS17305 PF00589 Phage integrase family COG34_RS17305 PF13356 Arm DNA-binding domain COG34_RS17315 PF01668 SmpB protein COG34_RS17320 PF03364 Polyketide cyclase / dehydrase and lipid transport COG34_RS17325 PF03658 RnfH family Ubiquitin COG34_RS17330 PF04355 SmpA / OmlA family COG34_RS17335 PF02463 RecF/RecN/SMC N terminal domain COG34_RS17340 PF01513 ATP-NAD kinase COG34_RS17350 PF01025 GrpE COG34_RS17355 PF00571 CBS domain COG34_RS17355 PF01595 Cyclin M transmembrane N-terminal domain COG34_RS17355 PF03471 Transporter associated domain COG34_RS17360 PF01578 Cytochrome C assembly protein COG34_RS17365 PF00448 SRP54-type protein, GTPase domain COG34_RS17365 PF02978 Signal peptide binding domain COG34_RS17365 PF02881 SRP54-type protein, helical bundle domain COG34_RS17370 PF00886 Ribosomal protein S16 COG34_RS17375 PF05239 PRC-barrel domain COG34_RS17375 PF01782 RimM N-terminal domain COG34_RS17380 PF01746 tRNA (Guanine-1)-methyltransferase COG34_RS17385 PF01245 Ribosomal protein L19 COG34_RS17390 PF00691 OmpA family COG34_RS17395 PF00990 Diguanylate cyclase, GGDEF domain COG34_RS17395 PF17152 Periplasmic sensor domain COG34_RS17400 PF13689 YfiR/HmsC-like COG34_RS17405 PF10973 Protein of unknown function (DUF2799) COG34_RS17410 PF00793 DAHP synthetase I family COG34_RS17415 PF02153 Prephenate dehydrogenase COG34_RS17415 PF01817 Chorismate mutase type II COG34_RS17420 PF01817 Chorismate mutase type II COG34_RS17420 PF00800 Prephenate dehydratase COG34_RS17425 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein COG34_RS17435 PF13525 Outer membrane lipoprotein COG34_RS17440 PF00849 RNA pseudouridylate synthase COG34_RS17440 PF01479 S4 domain COG34_RS17445 PF02578 Multi-copper polyphenol oxidoreductase laccase COG34_RS17450 PF00004 ATPase family associated with various cellular activities (AAA) COG34_RS17450 PF07724 AAA domain (Cdc48 subfamily) COG34_RS17450 PF10431 C-terminal, D2-small domain, of ClpB protein COG34_RS17450 PF02861 Clp amino terminal domain, pathogenicity island component COG34_RS17450 PF17871 AAA lid domain COG34_RS17480 PF00083 Sugar (and other) transporter COG34_RS17485 PF10043 Predicted periplasmic lipoprotein (DUF2279) COG34_RS17490 PF13091 PLD-like domain COG34_RS17495 PF00583 Acetyltransferase (GNAT) family COG34_RS17495 PF13607 Succinyl-CoA ligase like flavodoxin domain COG34_RS17495 PF13380 CoA binding domain COG34_RS17500 PF03942 DTW domain COG34_RS17505 PF00085 Thioredoxin COG34_RS17515 PF00588 SpoU rRNA Methylase family COG34_RS17515 PF08032 RNA 2'-O ribose methyltransferase substrate binding COG34_RS17520 PF03167 Uracil DNA glycosylase superfamily COG34_RS17525 PF01228 Glycine radical COG34_RS17530 PF01810 LysE type translocator COG34_RS17535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS17535 PF03466 LysR substrate binding domain COG34_RS17540 PF00271 Helicase conserved C-terminal domain COG34_RS17540 PF00270 DEAD/DEAH box helicase COG34_RS17545 PF05175 Methyltransferase small domain COG34_RS17550 PF00890 FAD binding domain COG34_RS17550 PF02910 Fumarate reductase flavoprotein C-term COG34_RS17555 PF04542 Sigma-70 region 2 COG34_RS17555 PF08281 Sigma-70, region 4 COG34_RS17560 PF03872 Anti sigma-E protein RseA, N-terminal domain COG34_RS17560 PF03873 Anti sigma-E protein RseA, C-terminal domain COG34_RS17565 PF03888 MucB/RseB N-terminal domain COG34_RS17565 PF17188 MucB/RseB C-terminal domain COG34_RS17575 PF03144 Elongation factor Tu domain 2 COG34_RS17575 PF06421 GTP-binding protein LepA C-terminus COG34_RS17575 PF00009 Elongation factor Tu GTP binding domain COG34_RS17575 PF00679 Elongation factor G C-terminus COG34_RS17580 PF10502 Signal peptidase, peptidase S26 COG34_RS17590 PF00035 Double-stranded RNA binding motif COG34_RS17590 PF14622 Ribonuclease-III-like COG34_RS17595 PF07650 KH domain COG34_RS17595 PF01926 50S ribosome-binding GTPase COG34_RS17600 PF11967 Recombination protein O N terminal COG34_RS17600 PF02565 Recombination protein O C terminal COG34_RS17605 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ COG34_RS17610 PF01648 4'-phosphopantetheinyl transferase superfamily COG34_RS17630 PF12838 4Fe-4S dicluster domain COG34_RS17635 PF01418 Helix-turn-helix domain, rpiR family COG34_RS17635 PF01380 SIS domain COG34_RS17645 PF14437 MafB19-like deaminase COG34_RS17650 PF01464 Transglycosylase SLT domain COG34_RS17650 PF00497 Bacterial extracellular solute-binding proteins, family 3 COG34_RS17655 PF02769 AIR synthase related protein, C-terminal domain COG34_RS17655 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal COG34_RS17655 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain COG34_RS17660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS17660 PF00512 His Kinase A (phospho-acceptor) domain COG34_RS17665 PF13942 YfhG lipoprotein COG34_RS17670 PF00158 Sigma-54 interaction domain COG34_RS17670 PF00072 Response regulator receiver domain COG34_RS17675 PF00543 Nitrogen regulatory protein P-II COG34_RS17680 PF00042 Globin COG34_RS17680 PF00175 Oxidoreductase NAD-binding domain COG34_RS17680 PF00970 Oxidoreductase FAD-binding domain COG34_RS17685 PF00464 Serine hydroxymethyltransferase COG34_RS17690 PF00480 ROK family COG34_RS17695 PF17128 Domain of unknown function (DUF5107) COG34_RS17695 PF13181 Tetratricopeptide repeat COG34_RS17700 PF13407 Periplasmic binding protein domain COG34_RS17705 PF00005 ABC transporter COG34_RS17710 PF02653 Branched-chain amino acid transport system / permease component COG34_RS17715 PF08240 Alcohol dehydrogenase GroES-like domain COG34_RS17715 PF00107 Zinc-binding dehydrogenase COG34_RS17720 PF01263 Aldose 1-epimerase COG34_RS17725 PF07681 DoxX COG34_RS17730 PF07992 Pyridine nucleotide-disulphide oxidoreductase COG34_RS17730 PF14759 Reductase C-terminal COG34_RS17735 PF00106 short chain dehydrogenase COG34_RS17740 PF00355 Rieske [2Fe-2S] domain COG34_RS17745 PF00866 Ring hydroxylating beta subunit COG34_RS17750 PF00355 Rieske [2Fe-2S] domain COG34_RS17750 PF00848 Ring hydroxylating alpha subunit (catalytic domain) COG34_RS17755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS17755 PF03466 LysR substrate binding domain COG34_RS17760 PF12832 MFS_1 like family COG34_RS17765 PF00874 PRD domain COG34_RS17770 PF12146 Serine aminopeptidase, S33 COG34_RS17775 PF00459 Inositol monophosphatase family COG34_RS17780 PF00588 SpoU rRNA Methylase family COG34_RS17785 PF02082 Transcriptional regulator COG34_RS17790 PF00266 Aminotransferase class-V COG34_RS17795 PF01592 NifU-like N terminal domain COG34_RS17800 PF01521 Iron-sulphur cluster biosynthesis COG34_RS17805 PF07743 HSCB C-terminal oligomerisation domain COG34_RS17810 PF00012 Hsp70 protein COG34_RS17815 PF00111 2Fe-2S iron-sulfur cluster binding domain COG34_RS17820 PF04384 Iron-sulphur cluster assembly COG34_RS17825 PF12404 Peptidase COG34_RS17825 PF00883 Cytosol aminopeptidase family, catalytic domain COG34_RS17830 PF14581 SseB protein C-terminal domain COG34_RS17830 PF07179 SseB protein N-terminal domain COG34_RS17835 PF00581 Rhodanese-like domain COG34_RS17840 PF17962 Bacterial macroglobulin domain 6 COG34_RS17840 PF07678 A-macroglobulin TED domain COG34_RS17840 PF07703 Alpha-2-macroglobulin bait region domain COG34_RS17840 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain COG34_RS17840 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain COG34_RS17840 PF11974 Bacterial alpha-2-macroglobulin MG3 domain COG34_RS17840 PF00207 Alpha-2-macroglobulin family COG34_RS17840 PF01835 MG2 domain COG34_RS17840 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain COG34_RS17845 PF00905 Penicillin binding protein transpeptidase domain COG34_RS17845 PF00912 Transglycosylase COG34_RS17845 PF06832 Penicillin-Binding Protein C-terminus Family COG34_RS17850 PF00334 Nucleoside diphosphate kinase COG34_RS17855 PF04055 Radical SAM superfamily COG34_RS17865 PF13464 Domain of unknown function (DUF4115) COG34_RS17870 PF04551 GcpE protein COG34_RS17875 PF13393 Histidyl-tRNA synthetase COG34_RS17875 PF03129 Anticodon binding domain COG34_RS17880 PF09976 Tetratricopeptide repeat-like domain COG34_RS17885 PF13360 PQQ-like domain COG34_RS17890 PF01926 50S ribosome-binding GTPase COG34_RS17890 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal COG34_RS17895 PF07191 zinc-ribbons COG34_RS17900 PF02601 Exonuclease VII, large subunit COG34_RS17900 PF13742 OB-fold nucleic acid binding domain COG34_RS17905 PF00478 IMP dehydrogenase / GMP reductase domain COG34_RS17905 PF00571 CBS domain COG34_RS17910 PF02540 NAD synthase COG34_RS17910 PF00117 Glutamine amidotransferase class-I COG34_RS17910 PF00958 GMP synthase C terminal domain COG34_RS17915 PF17358 Family of unknown function (DUF5384) COG34_RS17920 PF05433 Glycine zipper 2TM domain COG34_RS17930 PF11119 Protein of unknown function (DUF2633) COG34_RS17940 PF00563 EAL domain COG34_RS17940 PF05231 MASE1 COG34_RS17945 PF02541 Ppx/GppA phosphatase family COG34_RS17950 PF02503 Polyphosphate kinase middle domain COG34_RS17950 PF13089 Polyphosphate kinase N-terminal domain COG34_RS17950 PF17941 Polyphosphate kinase C-terminal domain 1 COG34_RS17950 PF13090 Polyphosphate kinase C-terminal domain 2 COG34_RS17955 PF00551 Formyl transferase COG34_RS17960 PF02769 AIR synthase related protein, C-terminal domain COG34_RS17960 PF00586 AIR synthase related protein, N-terminal domain COG34_RS17975 PF00860 Permease family COG34_RS17980 PF00308 Bacterial dnaA protein COG34_RS17985 PF03960 ArsC family COG34_RS17990 PF01435 Peptidase family M48 COG34_RS17995 PF01594 AI-2E family transporter COG34_RS18015 PF07450 Formate hydrogenlyase maturation protein HycH COG34_RS18025 PF12838 4Fe-4S dicluster domain COG34_RS18030 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit COG34_RS18030 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit COG34_RS18030 PF00374 Nickel-dependent hydrogenase COG34_RS18035 PF00361 Proton-conducting membrane transporter COG34_RS18035 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus COG34_RS18040 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L COG34_RS18050 PF00146 NADH dehydrogenase COG34_RS18055 PF00361 Proton-conducting membrane transporter COG34_RS18060 PF00037 4Fe-4S binding domain COG34_RS18060 PF12798 4Fe-4S binding domain COG34_RS18065 PF00578 AhpC/TSA family COG34_RS18070 PF01842 ACT domain COG34_RS18075 PF00701 Dihydrodipicolinate synthetase family COG34_RS18080 PF06804 NlpB/DapX lipoprotein COG34_RS18085 PF01259 SAICAR synthetase COG34_RS18090 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin COG34_RS18095 PF01850 PIN domain COG34_RS18100 PF04228 Putative neutral zinc metallopeptidase COG34_RS18105 PF13718 GNAT acetyltransferase 2 COG34_RS18105 PF05127 Helicase COG34_RS18105 PF08351 Domain of unknown function (DUF1726) COG34_RS18105 PF17176 tRNA-binding domain COG34_RS18110 PF02230 Phospholipase/Carboxylesterase COG34_RS18115 PF13980 Uncharacterised protein family (UPF0370) COG34_RS18120 PF07687 Peptidase dimerisation domain COG34_RS18120 PF01546 Peptidase family M20/M25/M40 COG34_RS18125 PF03960 ArsC family COG34_RS18140 PF00873 AcrB/AcrD/AcrF family COG34_RS18145 PF00672 HAMP domain COG34_RS18145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS18145 PF07730 Histidine kinase COG34_RS18145 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term COG34_RS18150 PF07992 Pyridine nucleotide-disulphide oxidoreductase COG34_RS18150 PF13247 4Fe-4S dicluster domain COG34_RS18150 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster COG34_RS18155 PF00293 NUDIX domain COG34_RS18160 PF06674 Protein of unknown function (DUF1176) COG34_RS18165 PF02780 Transketolase, C-terminal domain COG34_RS18165 PF02779 Transketolase, pyrimidine binding domain COG34_RS18165 PF00456 Transketolase, thiamine diphosphate binding domain COG34_RS18170 PF00923 Transaldolase/Fructose-6-phosphate aldolase COG34_RS18175 PF01515 Phosphate acetyl/butaryl transferase COG34_RS18175 PF03949 Malic enzyme, NAD binding domain COG34_RS18175 PF00390 Malic enzyme, N-terminal domain COG34_RS18185 PF00936 BMC domain COG34_RS18190 PF10662 Ethanolamine utilisation - propanediol utilisation COG34_RS18195 PF06249 Ethanolamine utilisation protein EutQ COG34_RS18200 PF01923 Cobalamin adenosyltransferase COG34_RS18205 PF01515 Phosphate acetyl/butaryl transferase COG34_RS18210 PF00936 BMC domain COG34_RS18215 PF03319 Ethanolamine utilisation protein EutN/carboxysome COG34_RS18220 PF00171 Aldehyde dehydrogenase family COG34_RS18230 PF00465 Iron-containing alcohol dehydrogenase COG34_RS18235 PF04346 Ethanolamine utilisation protein, EutH COG34_RS18240 PF06277 Ethanolamine utilisation protein EutA COG34_RS18245 PF06751 Ethanolamine ammonia lyase large subunit (EutB) COG34_RS18250 PF05985 Ethanolamine ammonia-lyase light chain (EutC) COG34_RS18255 PF00936 BMC domain COG34_RS18260 PF16365 Ethanolamine utilization protein EutK C-terminus COG34_RS18260 PF00936 BMC domain COG34_RS18265 PF12833 Helix-turn-helix domain COG34_RS18270 PF01218 Coproporphyrinogen III oxidase COG34_RS18275 PF01520 N-acetylmuramoyl-L-alanine amidase COG34_RS18280 PF00583 Acetyltransferase (GNAT) family COG34_RS18285 PF11143 Protein of unknown function (DUF2919) COG34_RS18290 PF06572 Protein of unknown function (DUF1131) COG34_RS18295 PF04261 Dyp-type peroxidase family COG34_RS18300 PF00144 Beta-lactamase COG34_RS18305 PF00367 phosphotransferase system, EIIB COG34_RS18305 PF02378 Phosphotransferase system, EIIC COG34_RS18310 PF01380 SIS domain COG34_RS18315 PF01418 Helix-turn-helix domain, rpiR family COG34_RS18315 PF01380 SIS domain COG34_RS18330 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS18335 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS18340 PF00005 ABC transporter COG34_RS18345 PF00291 Pyridoxal-phosphate dependent enzyme COG34_RS18350 PF17263 Family of unknown function (DUF5329) COG34_RS18355 PF08543 Phosphomethylpyrimidine kinase COG34_RS18360 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 COG34_RS18365 PF00391 PEP-utilising enzyme, mobile domain COG34_RS18365 PF05524 PEP-utilising enzyme, N-terminal COG34_RS18365 PF02896 PEP-utilising enzyme, TIM barrel domain COG34_RS18370 PF00381 PTS HPr component phosphorylation site COG34_RS18375 PF00291 Pyridoxal-phosphate dependent enzyme COG34_RS18385 PF04354 ZipA, C-terminal FtsZ-binding domain COG34_RS18390 PF03120 NAD-dependent DNA ligase OB-fold domain COG34_RS18390 PF03119 NAD-dependent DNA ligase C4 zinc finger domain COG34_RS18390 PF12826 Helix-hairpin-helix motif COG34_RS18390 PF01653 NAD-dependent DNA ligase adenylation domain COG34_RS18390 PF00533 BRCA1 C Terminus (BRCT) domain COG34_RS18395 PF12843 Putative quorum-sensing-regulated virulence factor COG34_RS18400 PF13593 SBF-like CPA transporter family (DUF4137) COG34_RS18405 PF03466 LysR substrate binding domain COG34_RS18405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS18410 PF03502 Nucleoside-specific channel-forming protein, Tsx COG34_RS18415 PF01048 Phosphorylase superfamily COG34_RS18420 PF03825 Nucleoside H+ symporter COG34_RS18430 PF03466 LysR substrate binding domain COG34_RS18430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS18465 PF00749 tRNA synthetases class I (E and Q), catalytic domain COG34_RS18470 PF07037 Putative transcription regulator (DUF1323) COG34_RS18475 PF07037 Putative transcription regulator (DUF1323) COG34_RS18490 PF00563 EAL domain COG34_RS18490 PF05231 MASE1 COG34_RS18495 PF01773 Na+ dependent nucleoside transporter N-terminus COG34_RS18495 PF07662 Na+ dependent nucleoside transporter C-terminus COG34_RS18495 PF07670 Nucleoside recognition COG34_RS18500 PF01566 Natural resistance-associated macrophage protein COG34_RS18505 PF10697 Protein of unknown function (DUF2502) COG34_RS18510 PF00654 Voltage gated chloride channel COG34_RS18515 PF02685 Glucokinase COG34_RS18520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit COG34_RS18525 PF02378 Phosphotransferase system, EIIC COG34_RS18530 PF01321 Creatinase/Prolidase N-terminal domain COG34_RS18530 PF00557 Metallopeptidase family M24 COG34_RS18535 PF05343 M42 glutamyl aminopeptidase COG34_RS18540 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 COG34_RS18540 PF05524 PEP-utilising enzyme, N-terminal COG34_RS18540 PF02896 PEP-utilising enzyme, TIM barrel domain COG34_RS18540 PF00391 PEP-utilising enzyme, mobile domain COG34_RS18540 PF00381 PTS HPr component phosphorylation site COG34_RS18545 PF12833 Helix-turn-helix domain COG34_RS18550 PF04397 LytTr DNA-binding domain COG34_RS18550 PF00072 Response regulator receiver domain COG34_RS18555 PF06580 Histidine kinase COG34_RS18555 PF07694 5TMR of 5TMR-LYT COG34_RS18555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS18560 PF00155 Aminotransferase class I and II COG34_RS18570 PF03279 Bacterial lipid A biosynthesis acyltransferase COG34_RS18575 PF10810 Protein of unknown function (DUF2545) COG34_RS18590 PF10938 YfdX protein COG34_RS18595 PF02515 CoA-transferase family III COG34_RS18600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain COG34_RS18600 PF00205 Thiamine pyrophosphate enzyme, central domain COG34_RS18600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain COG34_RS18605 PF03547 Membrane transport protein COG34_RS18610 PF02515 CoA-transferase family III COG34_RS18615 PF00072 Response regulator receiver domain COG34_RS18615 PF01627 Hpt domain COG34_RS18615 PF00497 Bacterial extracellular solute-binding proteins, family 3 COG34_RS18615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS18615 PF00512 His Kinase A (phospho-acceptor) domain COG34_RS18620 PF00196 Bacterial regulatory proteins, luxR family COG34_RS18620 PF00072 Response regulator receiver domain COG34_RS18625 PF00529 HlyD membrane-fusion protein of T1SS COG34_RS18625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion COG34_RS18630 PF07690 Major Facilitator Superfamily COG34_RS18635 PF00291 Pyridoxal-phosphate dependent enzyme COG34_RS18645 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family COG34_RS18645 PF00356 Bacterial regulatory proteins, lacI family COG34_RS18650 PF08244 Glycosyl hydrolases family 32 C terminal COG34_RS18650 PF00251 Glycosyl hydrolases family 32 N-terminal domain COG34_RS18655 PF00294 pfkB family carbohydrate kinase COG34_RS18660 PF01306 LacY proton/sugar symporter COG34_RS18760 PF01381 Helix-turn-helix COG34_RS18760 PF00717 Peptidase S24-like COG34_RS18765 PF01381 Helix-turn-helix COG34_RS18765 PF00717 Peptidase S24-like COG34_RS18780 PF00772 DnaB-like helicase N terminal domain COG34_RS18780 PF03796 DnaB-like helicase C terminal domain COG34_RS18785 PF05772 NinB protein COG34_RS18810 PF07102 Protein of unknown function (DUF1364) COG34_RS18850 PF03245 Bacteriophage Rz lysis protein COG34_RS18950 PF03869 Arc-like DNA binding domain COG34_RS18965 PF00535 Glycosyl transferase family 2 COG34_RS18970 PF04138 GtrA-like protein COG34_RS18975 PF14659 Phage integrase, N-terminal SAM-like domain COG34_RS18975 PF13356 Arm DNA-binding domain COG34_RS18975 PF00589 Phage integrase family COG34_RS18985 PF01226 Formate/nitrite transporter COG34_RS18995 PF04333 MlaA lipoprotein COG34_RS19010 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) COG34_RS19020 PF04175 Protein of unknown function (DUF406) COG34_RS19025 PF00108 Thiolase, N-terminal domain COG34_RS19025 PF02803 Thiolase, C-terminal domain COG34_RS19030 PF00378 Enoyl-CoA hydratase/isomerase COG34_RS19030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain COG34_RS19030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain COG34_RS19035 PF00300 Histidine phosphatase superfamily (branch 1) COG34_RS19040 PF00419 Fimbrial protein COG34_RS19045 PF00577 Outer membrane usher protein COG34_RS19045 PF13954 PapC N-terminal domain COG34_RS19045 PF13953 PapC C-terminal domain COG34_RS19050 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain COG34_RS19050 PF02753 Pili assembly chaperone PapD, C-terminal domain COG34_RS19055 PF00419 Fimbrial protein COG34_RS19060 PF00419 Fimbrial protein COG34_RS19065 PF00419 Fimbrial protein COG34_RS19070 PF11245 Protein of unknown function (DUF2544) COG34_RS19075 PF01713 Smr domain COG34_RS19080 PF05175 Methyltransferase small domain COG34_RS19085 PF01264 Chorismate synthase COG34_RS19090 PF03411 Penicillin-insensitive murein endopeptidase COG34_RS19095 PF01925 Sulfite exporter TauE/SafE COG34_RS19100 PF04315 Elongation factor P hydroxylase COG34_RS19105 PF08891 YfcL protein COG34_RS19110 PF01266 FAD dependent oxidoreductase COG34_RS19110 PF05430 S-adenosyl-L-methionine-dependent methyltransferase COG34_RS19115 PF00109 Beta-ketoacyl synthase, N-terminal domain COG34_RS19115 PF02801 Beta-ketoacyl synthase, C-terminal domain COG34_RS19125 PF07690 Major Facilitator Superfamily COG34_RS19135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain COG34_RS19135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain COG34_RS19135 PF11890 Domain of unknown function (DUF3410) COG34_RS19140 PF01118 Semialdehyde dehydrogenase, NAD binding domain COG34_RS19140 PF02774 Semialdehyde dehydrogenase, dimerisation domain COG34_RS19145 PF01416 tRNA pseudouridine synthase COG34_RS19150 PF09335 SNARE associated Golgi protein COG34_RS19155 PF01039 Carboxyl transferase domain COG34_RS19155 PF17848 Acetyl-coA carboxylase zinc finger domain COG34_RS19160 PF02875 Mur ligase family, glutamate ligase domain COG34_RS19160 PF08245 Mur ligase middle domain COG34_RS19165 PF05036 Sporulation related domain COG34_RS19170 PF02674 Colicin V production protein COG34_RS19175 PF00156 Phosphoribosyl transferase domain COG34_RS19180 PF02441 Flavoprotein COG34_RS19185 PF00497 Bacterial extracellular solute-binding proteins, family 3 COG34_RS19190 PF00497 Bacterial extracellular solute-binding proteins, family 3 COG34_RS19195 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS19200 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS19205 PF00005 ABC transporter COG34_RS19210 PF04754 Putative transposase, YhgA-like COG34_RS19215 PF01370 NAD dependent epimerase/dehydratase family COG34_RS19215 PF08338 Domain of unknown function (DUF1731) COG34_RS19220 PF02152 Dihydroneopterin aldolase COG34_RS19225 PF00043 Glutathione S-transferase, C-terminal domain COG34_RS19225 PF02798 Glutathione S-transferase, N-terminal domain COG34_RS19230 PF02798 Glutathione S-transferase, N-terminal domain COG34_RS19230 PF14834 Glutathione S-transferase, C-terminal domain COG34_RS19235 PF12850 Calcineurin-like phosphoesterase superfamily domain COG34_RS19240 PF00293 NUDIX domain COG34_RS19245 PF03606 C4-dicarboxylate anaerobic carrier COG34_RS19250 PF07085 DRTGG domain COG34_RS19250 PF01515 Phosphate acetyl/butaryl transferase COG34_RS19255 PF00871 Acetokinase family COG34_RS19260 PF04217 Protein of unknown function, DUF412 COG34_RS19265 PF03887 YfbU domain COG34_RS19270 PF13419 Haloacid dehalogenase-like hydrolase COG34_RS19275 PF03600 Citrate transporter COG34_RS19275 PF02080 TrkA-C domain COG34_RS19285 PF00155 Aminotransferase class I and II COG34_RS19295 PF03466 LysR substrate binding domain COG34_RS19295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS19300 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 COG34_RS19305 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit COG34_RS19310 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit COG34_RS19310 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit COG34_RS19320 PF10531 SLBB domain COG34_RS19320 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region COG34_RS19320 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit COG34_RS19325 PF01568 Molydopterin dinucleotide binding domain COG34_RS19325 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region COG34_RS19325 PF00384 Molybdopterin oxidoreductase COG34_RS19325 PF04879 Molybdopterin oxidoreductase Fe4S4 domain COG34_RS19330 PF00146 NADH dehydrogenase COG34_RS19335 PF12838 4Fe-4S dicluster domain COG34_RS19340 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 COG34_RS19345 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L COG34_RS19350 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus COG34_RS19350 PF00361 Proton-conducting membrane transporter COG34_RS19355 PF00361 Proton-conducting membrane transporter COG34_RS19360 PF00361 Proton-conducting membrane transporter COG34_RS19365 PF08974 Domain of unknown function (DUF1877) COG34_RS19370 PF04389 Peptidase family M28 COG34_RS19380 PF02902 Ulp1 protease family, C-terminal catalytic domain COG34_RS19385 PF12706 Beta-lactamase superfamily domain COG34_RS19390 PF13673 Acetyltransferase (GNAT) domain COG34_RS19395 PF05957 Bacterial protein of unknown function (DUF883) COG34_RS19400 PF00425 chorismate binding enzyme COG34_RS19405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain COG34_RS19405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain COG34_RS19405 PF16582 Middle domain of thiamine pyrophosphate COG34_RS19410 PF12697 Alpha/beta hydrolase family COG34_RS19415 PF00378 Enoyl-CoA hydratase/isomerase COG34_RS19420 PF13378 Enolase C-terminal domain-like COG34_RS19425 PF00501 AMP-binding enzyme COG34_RS19425 PF13193 AMP-binding enzyme C-terminal domain COG34_RS19440 PF00892 EamA-like transporter family COG34_RS19445 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase COG34_RS19450 PF01522 Polysaccharide deacetylase COG34_RS19455 PF02911 Formyl transferase, C-terminal domain COG34_RS19455 PF01370 NAD dependent epimerase/dehydratase family COG34_RS19455 PF00551 Formyl transferase COG34_RS19460 PF00535 Glycosyl transferase family 2 COG34_RS19465 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family COG34_RS19470 PF00300 Histidine phosphatase superfamily (branch 1) COG34_RS19475 PF00293 NUDIX domain COG34_RS19480 PF07437 YfaZ precursor COG34_RS19485 PF00994 Probable molybdopterin binding domain COG34_RS19490 PF03328 HpcH/HpaI aldolase/citrate lyase family COG34_RS19495 PF04754 Putative transposase, YhgA-like COG34_RS19500 PF02754 Cysteine-rich domain COG34_RS19500 PF13183 4Fe-4S dicluster domain COG34_RS19505 PF00890 FAD binding domain COG34_RS19510 PF04324 BFD-like [2Fe-2S] binding domain COG34_RS19510 PF01266 FAD dependent oxidoreductase COG34_RS19515 PF07690 Major Facilitator Superfamily COG34_RS19520 PF03009 Glycerophosphoryl diester phosphodiesterase family COG34_RS19535 PF00111 2Fe-2S iron-sulfur cluster binding domain COG34_RS19540 PF00268 Ribonucleotide reductase, small chain COG34_RS19545 PF03477 ATP cone domain COG34_RS19545 PF02867 Ribonucleotide reductase, barrel domain COG34_RS19545 PF00317 Ribonucleotide reductase, all-alpha domain COG34_RS19555 PF03797 Autotransporter beta-domain COG34_RS19555 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat COG34_RS19555 PF12951 Passenger-associated-transport-repeat COG34_RS19565 PF03989 DNA gyrase C-terminal domain, beta-propeller COG34_RS19565 PF00521 DNA gyrase/topoisomerase IV, subunit A COG34_RS19570 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) COG34_RS19575 PF06672 Protein of unknown function (DUF1175) COG34_RS19585 PF08486 Stage II sporulation protein COG34_RS19585 PF10062 Predicted secreted protein (DUF2300) COG34_RS19590 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) COG34_RS19595 PF00072 Response regulator receiver domain COG34_RS19595 PF00512 His Kinase A (phospho-acceptor) domain COG34_RS19595 PF09456 RcsC Alpha-Beta-Loop (ABL) COG34_RS19595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS19600 PF00196 Bacterial regulatory proteins, luxR family COG34_RS19600 PF00072 Response regulator receiver domain COG34_RS19605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS19605 PF01627 Hpt domain COG34_RS19605 PF16359 RcsD-ABL domain COG34_RS19620 PF00267 Gram-negative porin COG34_RS19625 PF02424 ApbE family COG34_RS19630 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain COG34_RS19630 PF02805 Metal binding domain of Ada COG34_RS19630 PF12833 Helix-turn-helix domain COG34_RS19630 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain COG34_RS19635 PF13532 2OG-Fe(II) oxygenase superfamily COG34_RS19640 PF00005 ABC transporter COG34_RS19645 PF06039 Malate:quinone oxidoreductase (Mqo) COG34_RS19650 PF03974 Ecotin COG34_RS19660 PF12800 4Fe-4S binding domain COG34_RS19660 PF13187 4Fe-4S dicluster domain COG34_RS19660 PF00037 4Fe-4S binding domain COG34_RS19665 PF03927 NapD protein COG34_RS19670 PF01568 Molydopterin dinucleotide binding domain COG34_RS19670 PF00384 Molybdopterin oxidoreductase COG34_RS19670 PF04879 Molybdopterin oxidoreductase Fe4S4 domain COG34_RS19675 PF12838 4Fe-4S dicluster domain COG34_RS19675 PF12800 4Fe-4S binding domain COG34_RS19680 PF13237 4Fe-4S dicluster domain COG34_RS19680 PF12801 4Fe-4S binding domain COG34_RS19685 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) COG34_RS19690 PF03264 NapC/NirT cytochrome c family, N-terminal region COG34_RS19695 PF00005 ABC transporter COG34_RS19700 PF03379 CcmB protein COG34_RS19705 PF01578 Cytochrome C assembly protein COG34_RS19710 PF04995 Heme exporter protein D (CcmD) COG34_RS19715 PF03100 CcmE COG34_RS19720 PF01578 Cytochrome C assembly protein COG34_RS19720 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal COG34_RS19725 PF08534 Redoxin COG34_RS19730 PF03918 Cytochrome C biogenesis protein COG34_RS19735 PF00196 Bacterial regulatory proteins, luxR family COG34_RS19735 PF00072 Response regulator receiver domain COG34_RS19745 PF03212 Pertactin COG34_RS19745 PF16168 Adhesin of bacterial autotransporter system, probable stalk COG34_RS19745 PF03797 Autotransporter beta-domain COG34_RS19750 PF03797 Autotransporter beta-domain COG34_RS19750 PF03212 Pertactin COG34_RS19750 PF16168 Adhesin of bacterial autotransporter system, probable stalk COG34_RS19760 PF11893 Domain of unknown function (DUF3413) COG34_RS19760 PF00884 Sulfatase COG34_RS19765 PF07208 Protein of unknown function (DUF1414) COG34_RS19770 PF04245 37-kD nucleoid-associated bacterial protein COG34_RS19775 PF01386 Ribosomal L25p family COG34_RS19780 PF00271 Helicase conserved C-terminal domain COG34_RS19780 PF04851 Type III restriction enzyme, res subunit COG34_RS19790 PF01479 S4 domain COG34_RS19790 PF00849 RNA pseudouridylate synthase COG34_RS19795 PF07690 Major Facilitator Superfamily COG34_RS19805 PF13989 YejG-like protein COG34_RS19810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region COG34_RS19810 PF00005 ABC transporter COG34_RS19815 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS19815 PF12911 N-terminal TM domain of oligopeptide transport permease C COG34_RS19820 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS19825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle COG34_RS19830 PF00563 EAL domain COG34_RS19830 PF12792 CSS motif domain associated with EAL COG34_RS19835 PF00877 NlpC/P60 family COG34_RS19840 PF01569 PAP2 superfamily COG34_RS19845 PF07683 Cobalamin synthesis protein cobW C-terminal domain COG34_RS19845 PF02492 CobW/HypB/UreG, nucleotide-binding domain COG34_RS19850 PF08125 Mannitol dehydrogenase C-terminal domain COG34_RS19850 PF01232 Mannitol dehydrogenase Rossmann domain COG34_RS19855 PF09285 Elongation factor P, C-terminal COG34_RS19855 PF01132 Elongation factor P (EF-P) OB domain COG34_RS19855 PF08207 Elongation factor P (EF-P) KOW-like domain COG34_RS19860 PF03692 Putative zinc- or iron-chelating domain COG34_RS19865 PF07690 Major Facilitator Superfamily COG34_RS19870 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 COG34_RS19870 PF00381 PTS HPr component phosphorylation site COG34_RS19875 PF00294 pfkB family carbohydrate kinase COG34_RS19880 PF02378 Phosphotransferase system, EIIC COG34_RS19880 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit COG34_RS19885 PF00294 pfkB family carbohydrate kinase COG34_RS19890 PF04227 Indigoidine synthase A like protein COG34_RS19895 PF07662 Na+ dependent nucleoside transporter C-terminus COG34_RS19895 PF01773 Na+ dependent nucleoside transporter N-terminus COG34_RS19900 PF00027 Cyclic nucleotide-binding domain COG34_RS19905 PF01156 Inosine-uridine preferring nucleoside hydrolase COG34_RS19910 PF07662 Na+ dependent nucleoside transporter C-terminus COG34_RS19910 PF01773 Na+ dependent nucleoside transporter N-terminus COG34_RS19915 PF00294 pfkB family carbohydrate kinase COG34_RS19920 PF01261 Xylose isomerase-like TIM barrel COG34_RS19925 PF03601 Conserved hypothetical protein 698 COG34_RS19930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS19930 PF03466 LysR substrate binding domain COG34_RS19940 PF00324 Amino acid permease COG34_RS19950 PF00593 TonB dependent receptor COG34_RS19950 PF07715 TonB-dependent Receptor Plug Domain COG34_RS19955 PF00756 Putative esterase COG34_RS19970 PF01227 GTP cyclohydrolase I COG34_RS19975 PF04235 Protein of unknown function (DUF418) COG34_RS19985 PF00356 Bacterial regulatory proteins, lacI family COG34_RS19990 PF13407 Periplasmic binding protein domain COG34_RS19995 PF00005 ABC transporter COG34_RS20000 PF02653 Branched-chain amino acid transport system / permease component COG34_RS20005 PF01180 Dihydroorotate dehydrogenase COG34_RS20010 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster COG34_RS20010 PF07992 Pyridine nucleotide-disulphide oxidoreductase COG34_RS20015 PF10808 Protein of unknown function (DUF2542) COG34_RS20020 PF02698 DUF218 domain COG34_RS20025 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region COG34_RS20025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region COG34_RS20030 PF04172 LrgB-like family COG34_RS20035 PF03788 LrgA family COG34_RS20040 PF01207 Dihydrouridine synthase (Dus) COG34_RS20060 PF02321 Outer membrane efflux protein COG34_RS20070 PF09335 SNARE associated Golgi protein COG34_RS20075 PF04893 Yip1 domain COG34_RS20080 PF00768 D-alanyl-D-alanine carboxypeptidase COG34_RS20085 PF01565 FAD binding domain COG34_RS20085 PF09330 D-lactate dehydrogenase, membrane binding COG34_RS20090 PF01915 Glycosyl hydrolase family 3 C-terminal domain COG34_RS20090 PF00933 Glycosyl hydrolase family 3 N terminal domain COG34_RS20090 PF14310 Fibronectin type III-like domain COG34_RS20095 PF04069 Substrate binding domain of ABC-type glycine betaine transport system COG34_RS20100 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS20105 PF00005 ABC transporter COG34_RS20110 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS20120 PF13411 MerR HTH family regulatory protein COG34_RS20125 PF07694 5TMR of 5TMR-LYT COG34_RS20125 PF06580 Histidine kinase COG34_RS20130 PF00072 Response regulator receiver domain COG34_RS20130 PF04397 LytTr DNA-binding domain COG34_RS20135 PF07308 Protein of unknown function (DUF1456) COG34_RS20140 PF06998 Protein of unknown function (DUF1307) COG34_RS20145 PF04434 SWIM zinc finger COG34_RS20150 PF05762 VWA domain containing CoxE-like protein COG34_RS20160 PF07728 AAA domain (dynein-related subfamily) COG34_RS20170 PF13569 Domain of unknown function (DUF4132) COG34_RS20175 PF13569 Domain of unknown function (DUF4132) COG34_RS20180 PF01588 Putative tRNA binding domain COG34_RS20180 PF09334 tRNA synthetases class I (M) COG34_RS20185 PF10609 NUBPL iron-transfer P-loop NTPase COG34_RS20190 PF10836 Protein of unknown function (DUF2574) COG34_RS20200 PF00419 Fimbrial protein COG34_RS20205 PF02753 Pili assembly chaperone PapD, C-terminal domain COG34_RS20205 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain COG34_RS20210 PF00577 Outer membrane usher protein COG34_RS20210 PF13954 PapC N-terminal domain COG34_RS20210 PF13953 PapC C-terminal domain COG34_RS20215 PF00419 Fimbrial protein COG34_RS20220 PF11776 Nickel/cobalt transporter regulator COG34_RS20225 PF03824 High-affinity nickel-transport protein COG34_RS20230 PF02583 Metal-sensitive transcriptional repressor COG34_RS20235 PF02110 Hydroxyethylthiazole kinase family COG34_RS20240 PF08543 Phosphomethylpyrimidine kinase COG34_RS20245 PF01183 Glycosyl hydrolases family 25 COG34_RS20250 PF00392 Bacterial regulatory proteins, gntR family COG34_RS20250 PF07702 UTRA domain COG34_RS20255 PF00294 pfkB family carbohydrate kinase COG34_RS20260 PF03747 ADP-ribosylglycohydrolase COG34_RS20265 PF03825 Nucleoside H+ symporter COG34_RS20270 PF01791 DeoC/LacD family aldolase COG34_RS20275 PF01116 Fructose-bisphosphate aldolase class-II COG34_RS20280 PF08013 Tagatose 6 phosphate kinase COG34_RS20285 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 COG34_RS20290 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit COG34_RS20295 PF03611 PTS system sugar-specific permease component COG34_RS20305 PF08220 DeoR-like helix-turn-helix domain COG34_RS20310 PF00781 Diacylglycerol kinase catalytic domain COG34_RS20325 PF02899 Phage integrase, N-terminal SAM-like domain COG34_RS20325 PF00589 Phage integrase family COG34_RS20365 PF05840 Bacteriophage replication gene A protein (GPA) COG34_RS20395 PF17862 AAA+ lid domain COG34_RS20395 PF01434 Peptidase family M41 COG34_RS20395 PF00004 ATPase family associated with various cellular activities (AAA) COG34_RS20395 PF06480 FtsH Extracellular COG34_RS20510 PF02796 Helix-turn-helix domain of resolvase COG34_RS20510 PF00239 Resolvase, N terminal domain COG34_RS20550 PF04606 Ogr/Delta-like zinc finger COG34_RS20555 PF01136 Peptidase family U32 COG34_RS20555 PF16325 Peptidase family U32 C-terminal domain COG34_RS20560 PF07411 Domain of unknown function (DUF1508) COG34_RS20565 PF00072 Response regulator receiver domain COG34_RS20565 PF00486 Transcriptional regulatory protein, C terminal COG34_RS20570 PF00672 HAMP domain COG34_RS20570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS20570 PF00512 His Kinase A (phospho-acceptor) domain COG34_RS20575 PF07690 Major Facilitator Superfamily COG34_RS20580 PF00873 AcrB/AcrD/AcrF family COG34_RS20585 PF00873 AcrB/AcrD/AcrF family COG34_RS20590 PF13533 Biotin-lipoyl like COG34_RS20600 PF00092 von Willebrand factor type A domain COG34_RS20615 PF00012 Hsp70 protein COG34_RS20620 PF00730 HhH-GPD superfamily base excision DNA repair protein COG34_RS20620 PF06029 AlkA N-terminal domain COG34_RS20625 PF00563 EAL domain COG34_RS20625 PF08448 PAS fold COG34_RS20625 PF05231 MASE1 COG34_RS20625 PF13426 PAS domain COG34_RS20625 PF00990 Diguanylate cyclase, GGDEF domain COG34_RS20625 PF08447 PAS fold COG34_RS20630 PF00485 Phosphoribulokinase / Uridine kinase family COG34_RS20635 PF00692 dUTPase COG34_RS20640 PF05170 AsmA family COG34_RS20645 PF02371 Transposase IS116/IS110/IS902 family COG34_RS20645 PF01548 Transposase COG34_RS20655 PF00571 CBS domain COG34_RS20655 PF03471 Transporter associated domain COG34_RS20655 PF03741 Integral membrane protein TerC family COG34_RS20660 PF02563 Polysaccharide biosynthesis/export protein COG34_RS20660 PF18412 Outer-membrane lipoprotein Wza C-terminal domain COG34_RS20660 PF10531 SLBB domain COG34_RS20665 PF01451 Low molecular weight phosphotyrosine protein phosphatase COG34_RS20670 PF13614 AAA domain COG34_RS20670 PF13807 G-rich domain on putative tyrosine kinase COG34_RS20670 PF02706 Chain length determinant protein COG34_RS20675 PF00535 Glycosyl transferase family 2 COG34_RS20680 PF00132 Bacterial transferase hexapeptide (six repeats) COG34_RS20685 PF13439 Glycosyltransferase Family 4 COG34_RS20685 PF00534 Glycosyl transferases group 1 COG34_RS20695 PF00535 Glycosyl transferase family 2 COG34_RS20700 PF00132 Bacterial transferase hexapeptide (six repeats) COG34_RS20705 PF16363 GDP-mannose 4,6 dehydratase COG34_RS20710 PF01370 NAD dependent epimerase/dehydratase family COG34_RS20715 PF00293 NUDIX domain COG34_RS20720 PF13579 Glycosyl transferase 4-like domain COG34_RS20720 PF00534 Glycosyl transferases group 1 COG34_RS20725 PF00483 Nucleotidyl transferase COG34_RS20725 PF01050 Mannose-6-phosphate isomerase COG34_RS20730 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II COG34_RS20730 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III COG34_RS20730 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I COG34_RS20730 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain COG34_RS20735 PF02397 Bacterial sugar transferase COG34_RS20745 PF04230 Polysaccharide pyruvyl transferase COG34_RS20750 PF13439 Glycosyltransferase Family 4 COG34_RS20750 PF00534 Glycosyl transferases group 1 COG34_RS20760 PF01370 NAD dependent epimerase/dehydratase family COG34_RS20765 PF00483 Nucleotidyl transferase COG34_RS20770 PF16363 GDP-mannose 4,6 dehydratase COG34_RS20775 PF00534 Glycosyl transferases group 1 COG34_RS20775 PF13439 Glycosyltransferase Family 4 COG34_RS20780 PF16363 GDP-mannose 4,6 dehydratase COG34_RS20785 PF01370 NAD dependent epimerase/dehydratase family COG34_RS20790 PF00293 NUDIX domain COG34_RS20795 PF01050 Mannose-6-phosphate isomerase COG34_RS20795 PF00483 Nucleotidyl transferase COG34_RS20800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain COG34_RS20800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III COG34_RS20800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II COG34_RS20800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I COG34_RS20820 PF01531 Glycosyl transferase family 11 COG34_RS20825 PF00535 Glycosyl transferase family 2 COG34_RS20840 PF01370 NAD dependent epimerase/dehydratase family COG34_RS20845 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain COG34_RS20845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase COG34_RS20850 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain COG34_RS20850 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain COG34_RS20850 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain COG34_RS20855 PF02706 Chain length determinant protein COG34_RS20860 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase COG34_RS20860 PF01502 Phosphoribosyl-AMP cyclohydrolase COG34_RS20865 PF00977 Histidine biosynthesis protein COG34_RS20870 PF00977 Histidine biosynthesis protein COG34_RS20875 PF00117 Glutamine amidotransferase class-I COG34_RS20880 PF00475 Imidazoleglycerol-phosphate dehydratase COG34_RS20885 PF00155 Aminotransferase class I and II COG34_RS20890 PF00815 Histidinol dehydrogenase COG34_RS20895 PF01634 ATP phosphoribosyltransferase COG34_RS20895 PF08029 HisG, C-terminal domain COG34_RS20910 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system COG34_RS20915 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system COG34_RS20920 PF01370 NAD dependent epimerase/dehydratase family COG34_RS20925 PF03466 LysR substrate binding domain COG34_RS20925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS20935 PF13520 Amino acid permease COG34_RS20940 PF04143 Sulphur transport COG34_RS20945 PF01206 Sulfurtransferase TusA COG34_RS20950 PF08411 Exonuclease C-terminal COG34_RS20950 PF00929 Exonuclease COG34_RS20955 PF07943 Penicillin-binding protein 5, C-terminal domain COG34_RS20955 PF00768 D-alanyl-D-alanine carboxypeptidase COG34_RS20965 PF01610 Transposase COG34_RS20965 PF13542 Helix-turn-helix domain of transposase family ISL3 COG34_RS20965 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 COG34_RS20980 PF04363 Protein of unknown function (DUF496) COG34_RS20985 PF10662 Ethanolamine utilisation - propanediol utilisation COG34_RS20990 PF01695 IstB-like ATP binding protein COG34_RS20995 PF02796 Helix-turn-helix domain of resolvase COG34_RS20995 PF00665 Integrase core domain COG34_RS21005 PF13276 HTH-like domain COG34_RS21005 PF00665 Integrase core domain COG34_RS21005 PF01527 Transposase COG34_RS21010 PF05717 IS66 Orf2 like protein COG34_RS21015 PF13817 IS66 C-terminal element COG34_RS21015 PF03050 Transposase IS66 family COG34_RS21015 PF13007 Transposase C of IS166 homeodomain COG34_RS21015 PF13005 zinc-finger binding domain of transposase IS66 COG34_RS21020 PF05717 IS66 Orf2 like protein COG34_RS21025 PF13817 IS66 C-terminal element COG34_RS21025 PF13007 Transposase C of IS166 homeodomain COG34_RS21025 PF13005 zinc-finger binding domain of transposase IS66 COG34_RS21025 PF03050 Transposase IS66 family COG34_RS21035 PF00196 Bacterial regulatory proteins, luxR family COG34_RS21035 PF00563 EAL domain COG34_RS21040 PF13018 Extended Signal Peptide of Type V secretion system COG34_RS21040 PF03797 Autotransporter beta-domain COG34_RS21040 PF03212 Pertactin COG34_RS21040 PF16168 Adhesin of bacterial autotransporter system, probable stalk COG34_RS21045 PF01075 Glycosyltransferase family 9 (heptosyltransferase) COG34_RS21060 PF00589 Phage integrase family COG34_RS21080 PF06755 CbtA_toxin of type IV toxin-antitoxin system COG34_RS21085 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A COG34_RS21090 PF06174 Protein of unknown function (DUF987) COG34_RS21095 PF04002 RadC-like JAB domain COG34_RS21100 PF03230 Antirestriction protein COG34_RS21110 PF06067 Domain of unknown function (DUF932) COG34_RS21120 PF06006 Bacterial protein of unknown function (DUF905) COG34_RS21125 PF03797 Autotransporter beta-domain COG34_RS21125 PF16168 Adhesin of bacterial autotransporter system, probable stalk COG34_RS21125 PF13018 Extended Signal Peptide of Type V secretion system COG34_RS21175 PF05321 Haemolysin expression modulating protein COG34_RS21230 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase COG34_RS21235 PF02654 Cobalamin-5-phosphate synthase COG34_RS21240 PF02277 Phosphoribosyltransferase COG34_RS21245 PF17969 L,D-transpeptidase C-terminal domain COG34_RS21245 PF03734 L,D-transpeptidase catalytic domain COG34_RS21285 PF00816 H-NS histone family COG34_RS21370 PF04851 Type III restriction enzyme, res subunit COG34_RS21370 PF08774 VRR-NUC domain COG34_RS21375 PF01555 DNA methylase COG34_RS21375 PF18273 Type III R-M EcoP15I C-terminal domain COG34_RS21380 PF00589 Phage integrase family COG34_RS21380 PF13356 Arm DNA-binding domain COG34_RS21390 PF03466 LysR substrate binding domain COG34_RS21390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS21395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS21395 PF03466 LysR substrate binding domain COG34_RS21405 PF01554 MatE COG34_RS21425 PF01709 Transcriptional regulator COG34_RS21430 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus COG34_RS21430 PF01048 Phosphorylase superfamily COG34_RS21435 PF00083 Sugar (and other) transporter COG34_RS21435 PF07690 Major Facilitator Superfamily COG34_RS21445 PF09134 Invasin, domain 3 COG34_RS21445 PF02369 Bacterial Ig-like domain (group 1) COG34_RS21445 PF11924 Inverse autotransporter, beta-domain COG34_RS21450 PF02369 Bacterial Ig-like domain (group 1) COG34_RS21450 PF11924 Inverse autotransporter, beta-domain COG34_RS21450 PF09134 Invasin, domain 3 COG34_RS21455 PF02369 Bacterial Ig-like domain (group 1) COG34_RS21455 PF09134 Invasin, domain 3 COG34_RS21455 PF11924 Inverse autotransporter, beta-domain COG34_RS21460 PF11924 Inverse autotransporter, beta-domain COG34_RS21460 PF02369 Bacterial Ig-like domain (group 1) COG34_RS21460 PF09134 Invasin, domain 3 COG34_RS21465 PF07715 TonB-dependent Receptor Plug Domain COG34_RS21465 PF00593 TonB dependent receptor COG34_RS21470 PF13193 AMP-binding enzyme C-terminal domain COG34_RS21470 PF00501 AMP-binding enzyme COG34_RS21475 PF00975 Thioesterase domain COG34_RS21500 PF00664 ABC transporter transmembrane region COG34_RS21500 PF04954 Siderophore-interacting protein COG34_RS21500 PF08021 Siderophore-interacting FAD-binding domain COG34_RS21500 PF00005 ABC transporter COG34_RS21505 PF00005 ABC transporter COG34_RS21505 PF00664 ABC transporter transmembrane region COG34_RS21510 PF07690 Major Facilitator Superfamily COG34_RS21515 PF00425 chorismate binding enzyme COG34_RS21520 PF13356 Arm DNA-binding domain COG34_RS21520 PF00589 Phage integrase family COG34_RS21565 PF00816 H-NS histone family COG34_RS21670 PF00589 Phage integrase family COG34_RS21670 PF13356 Arm DNA-binding domain COG34_RS21680 PF06167 Glucose-regulated metallo-peptidase M90 COG34_RS21695 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment COG34_RS21700 PF01794 Ferric reductase like transmembrane component COG34_RS21705 PF00174 Oxidoreductase molybdopterin binding domain COG34_RS21710 PF00576 HIUase/Transthyretin family COG34_RS21715 PF00072 Response regulator receiver domain COG34_RS21715 PF00486 Transcriptional regulatory protein, C terminal COG34_RS21720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS21720 PF00512 His Kinase A (phospho-acceptor) domain COG34_RS21735 PF00267 Gram-negative porin COG34_RS21745 PF01966 HD domain COG34_RS21750 PF18284 DNA methylase N-terminal domain COG34_RS21750 PF00145 C-5 cytosine-specific DNA methylase COG34_RS21755 PF03852 DNA mismatch endonuclease Vsr COG34_RS21760 PF00892 EamA-like transporter family COG34_RS21765 PF05661 Protein of unknown function (DUF808) COG34_RS21770 PF09926 Uncharacterized small protein (DUF2158) COG34_RS21790 PF10733 Protein of unknown function (DUF2525) COG34_RS21795 PF10781 Dextransucrase DSRB COG34_RS21800 PF00196 Bacterial regulatory proteins, luxR family COG34_RS21805 PF01311 Bacterial export proteins, family 1 COG34_RS21810 PF01313 Bacterial export proteins, family 3 COG34_RS21815 PF00813 FliP family COG34_RS21820 PF04347 Flagellar biosynthesis protein, FliO COG34_RS21825 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term COG34_RS21825 PF16973 Flagellar motor switch protein FliN N-terminal COG34_RS21830 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term COG34_RS21830 PF02154 Flagellar motor switch protein FliM COG34_RS21835 PF03748 Flagellar basal body-associated protein FliL COG34_RS21840 PF02120 Flagellar hook-length control protein FliK COG34_RS21845 PF02050 Flagellar FliJ protein COG34_RS21850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain COG34_RS21850 PF18269 T3SS EscN ATPase C-terminal domain COG34_RS21855 PF02108 Flagellar assembly protein FliH COG34_RS21860 PF01706 FliG C-terminal domain COG34_RS21860 PF14841 FliG middle domain COG34_RS21860 PF14842 FliG N-terminal domain COG34_RS21865 PF08345 Flagellar M-ring protein C-terminal COG34_RS21865 PF01514 Secretory protein of YscJ/FliF family COG34_RS21870 PF02049 Flagellar hook-basal body complex protein FliE COG34_RS21880 PF02586 SOS response associated peptidase (SRAP) COG34_RS21885 PF01206 Sulfurtransferase TusA COG34_RS21890 PF04143 Sulphur transport COG34_RS21900 PF13987 YedD-like protein COG34_RS21905 PF00128 Alpha amylase, catalytic domain COG34_RS21905 PF02806 Alpha amylase, C-terminal all-beta domain COG34_RS21910 PF05400 Flagellar protein FliT COG34_RS21915 PF02561 Flagellar protein FliS COG34_RS21920 PF07196 Flagellin hook IN motif COG34_RS21920 PF02465 Flagellar hook-associated protein 2 N-terminus COG34_RS21920 PF07195 Flagellar hook-associated protein 2 C-terminus COG34_RS21925 PF00669 Bacterial flagellin N-terminal helical region COG34_RS21925 PF00700 Bacterial flagellin C-terminal helical region COG34_RS21930 PF04545 Sigma-70, region 4 COG34_RS21930 PF04539 Sigma-70 region 3 COG34_RS21930 PF04542 Sigma-70 region 2 COG34_RS21935 PF02899 Phage integrase, N-terminal SAM-like domain COG34_RS21940 PF00497 Bacterial extracellular solute-binding proteins, family 3 COG34_RS21945 PF00291 Pyridoxal-phosphate dependent enzyme COG34_RS21950 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS21955 PF00005 ABC transporter COG34_RS21960 PF00196 Bacterial regulatory proteins, luxR family COG34_RS21960 PF03472 Autoinducer binding domain COG34_RS21965 PF10769 Protein of unknown function (DUF2594) COG34_RS21970 PF00072 Response regulator receiver domain COG34_RS21970 PF00196 Bacterial regulatory proteins, luxR family COG34_RS21975 PF01541 GIY-YIG catalytic domain COG34_RS21975 PF02151 UvrB/uvrC motif COG34_RS21975 PF08459 UvrC Helix-hairpin-helix N-terminal COG34_RS21980 PF01066 CDP-alcohol phosphatidyltransferase COG34_RS22000 PF02810 SEC-C motif COG34_RS22000 PF03695 Uncharacterised protein family (UPF0149) COG34_RS22005 PF03222 Tryptophan/tyrosine permease family COG34_RS22010 PF10678 Protein of unknown function (DUF2492) COG34_RS22015 PF00210 Ferritin-like domain COG34_RS22020 PF13992 YecR-like lipoprotein COG34_RS22035 PF10964 Protein of unknown function (DUF2766) COG34_RS22040 PF00210 Ferritin-like domain COG34_RS22050 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family COG34_RS22055 PF00005 ABC transporter COG34_RS22060 PF02653 Branched-chain amino acid transport system / permease component COG34_RS22065 PF02358 Trehalose-phosphatase COG34_RS22070 PF00982 Glycosyltransferase family 20 COG34_RS22075 PF00582 Universal stress protein family COG34_RS22080 PF05247 Flagellar transcriptional activator (FlhD) COG34_RS22085 PF05280 Flagellar transcriptional activator (FlhC) COG34_RS22090 PF01618 MotA/TolQ/ExbB proton channel family COG34_RS22095 PF00691 OmpA family COG34_RS22095 PF13677 Membrane MotB of proton-channel complex MotA/MotB COG34_RS22100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS22100 PF01627 Hpt domain COG34_RS22100 PF01584 CheW-like domain COG34_RS22100 PF09078 CheY binding COG34_RS22100 PF02895 Signal transducing histidine kinase, homodimeric domain COG34_RS22105 PF01584 CheW-like domain COG34_RS22110 PF02203 Tar ligand binding domain homologue COG34_RS22110 PF00672 HAMP domain COG34_RS22110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain COG34_RS22115 PF02203 Tar ligand binding domain homologue COG34_RS22115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain COG34_RS22115 PF00672 HAMP domain COG34_RS22120 PF01739 CheR methyltransferase, SAM binding domain COG34_RS22120 PF03705 CheR methyltransferase, all-alpha domain COG34_RS22125 PF01339 CheB methylesterase COG34_RS22125 PF00072 Response regulator receiver domain COG34_RS22130 PF00072 Response regulator receiver domain COG34_RS22135 PF04344 Chemotaxis phosphatase, CheZ COG34_RS22140 PF01312 FlhB HrpN YscU SpaS Family COG34_RS22145 PF00771 FHIPEP family COG34_RS22150 PF06366 Flagellar protein FlhE COG34_RS22155 PF07007 Lysozyme inhibitor LprI COG34_RS22160 PF00750 tRNA synthetases class I (R) COG34_RS22160 PF05746 DALR anticodon binding domain COG34_RS22160 PF03485 Arginyl tRNA synthetase N terminal domain COG34_RS22170 PF06185 YecM protein COG34_RS22175 PF03932 CutC family COG34_RS22180 PF03264 NapC/NirT cytochrome c family, N-terminal region COG34_RS22185 PF18364 Molybdopterin oxidoreductase N-terminal domain COG34_RS22185 PF01568 Molydopterin dinucleotide binding domain COG34_RS22185 PF00384 Molybdopterin oxidoreductase COG34_RS22195 PF02371 Transposase IS116/IS110/IS902 family COG34_RS22195 PF01548 Transposase COG34_RS22200 PF08003 Protein of unknown function (DUF1698) COG34_RS22205 PF13649 Methyltransferase domain COG34_RS22210 PF01124 MAPEG family COG34_RS22215 PF01904 Protein of unknown function DUF72 COG34_RS22220 PF00857 Isochorismatase family COG34_RS22225 PF00152 tRNA synthetases class II (D, K and N) COG34_RS22225 PF02938 GAD domain COG34_RS22225 PF01336 OB-fold nucleic acid binding domain COG34_RS22230 PF00293 NUDIX domain COG34_RS22235 PF01709 Transcriptional regulator COG34_RS22240 PF02075 Crossover junction endodeoxyribonuclease RuvC COG34_RS22245 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family COG34_RS22255 PF07499 RuvA, C-terminal domain COG34_RS22255 PF01330 RuvA N terminal domain COG34_RS22260 PF17864 RuvB AAA lid domain COG34_RS22260 PF05496 Holliday junction DNA helicase RuvB P-loop domain COG34_RS22260 PF05491 RuvB C-terminal winged helix domain COG34_RS22265 PF00950 ABC 3 transport family COG34_RS22270 PF00005 ABC transporter COG34_RS22275 PF01297 Zinc-uptake complex component A periplasmic COG34_RS22280 PF08525 Opacity-associated protein A N-terminal motif COG34_RS22280 PF01476 LysM domain COG34_RS22280 PF01551 Peptidase family M23 COG34_RS22285 PF03279 Bacterial lipid A biosynthesis acyltransferase COG34_RS22290 PF02887 Pyruvate kinase, alpha/beta domain COG34_RS22290 PF00224 Pyruvate kinase, barrel domain COG34_RS22295 PF01380 SIS domain COG34_RS22295 PF01418 Helix-turn-helix domain, rpiR family COG34_RS22300 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain COG34_RS22300 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain COG34_RS22305 PF00920 Dehydratase family COG34_RS22310 PF01081 KDPG and KHG aldolase COG34_RS22315 PF02222 ATP-grasp domain COG34_RS22320 PF07130 YebG protein COG34_RS22325 PF13995 YebF-like protein COG34_RS22330 PF04391 Protein of unknown function (DUF533) COG34_RS22335 PF00326 Prolyl oligopeptidase family COG34_RS22335 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain COG34_RS22340 PF00929 Exonuclease COG34_RS22345 PF00795 Carbon-nitrogen hydrolase COG34_RS22350 PF06440 DNA polymerase III, theta subunit COG34_RS22355 PF04234 CopC domain COG34_RS22360 PF05425 Copper resistance protein D COG34_RS22365 PF10709 Protein of unknown function (DUF2511) COG34_RS22370 PF00149 Calcineurin-like phosphoesterase COG34_RS22375 PF07358 Protein of unknown function (DUF1482) COG34_RS22380 PF07351 Protein of unknown function (DUF1480) COG34_RS22385 PF01189 16S rRNA methyltransferase RsmB/F COG34_RS22385 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF COG34_RS22385 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF COG34_RS22390 PF02470 MlaD protein COG34_RS22395 PF04403 Paraquat-inducible protein A COG34_RS22400 PF13185 GAF domain COG34_RS22405 PF04352 ProQ/FINO family COG34_RS22405 PF17516 ProQ C-terminal domain COG34_RS22410 PF17804 Tail specific protease N-terminal domain COG34_RS22410 PF03572 Peptidase family S41 COG34_RS22410 PF00595 PDZ domain COG34_RS22410 PF11818 C-terminal domain of tail specific protease (DUF3340) COG34_RS22415 PF01435 Peptidase family M48 COG34_RS22420 PF07690 Major Facilitator Superfamily COG34_RS22425 PF01614 Bacterial transcriptional regulator COG34_RS22425 PF09339 IclR helix-turn-helix domain COG34_RS22430 PF13996 YobH-like protein COG34_RS22435 PF13998 MgrB protein COG34_RS22440 PF13974 YebO-like protein COG34_RS22450 PF10736 Protein of unknown function (DUF2627) COG34_RS22455 PF00313 'Cold-shock' DNA-binding domain COG34_RS22460 PF13847 Methyltransferase domain COG34_RS22465 PF02659 Putative manganese efflux pump COG34_RS22475 PF06173 Protein of unknown function (DUF986) COG34_RS22480 PF03613 PTS system mannose/fructose/sorbose family IID component COG34_RS22485 PF03609 PTS system sorbose-specific iic component COG34_RS22490 PF03610 PTS system fructose IIA component COG34_RS22490 PF03830 PTS system sorbose subfamily IIB component COG34_RS22505 PF03741 Integral membrane protein TerC family COG34_RS22505 PF03471 Transporter associated domain COG34_RS22510 PF00563 EAL domain COG34_RS22510 PF12792 CSS motif domain associated with EAL COG34_RS22515 PF03315 Serine dehydratase beta chain COG34_RS22515 PF03313 Serine dehydratase alpha chain COG34_RS22520 PF00293 NUDIX domain COG34_RS22525 PF00425 chorismate binding enzyme COG34_RS22525 PF04715 Anthranilate synthase component I, N terminal region COG34_RS22530 PF03701 Uncharacterised protein family (UPF0181) COG34_RS22535 PF08986 Domain of unknown function (DUF1889) COG34_RS22540 PF01042 Endoribonuclease L-PSP COG34_RS22545 PF04851 Type III restriction enzyme, res subunit COG34_RS22545 PF13307 Helicase C-terminal domain COG34_RS22550 PF00814 Glycoprotease family COG34_RS22555 PF03843 Outer membrane lipoprotein Slp family COG34_RS22560 PF00501 AMP-binding enzyme COG34_RS22560 PF13193 AMP-binding enzyme C-terminal domain COG34_RS22565 PF01612 3'-5' exonuclease COG34_RS22565 PF00570 HRDC domain COG34_RS22570 PF00111 2Fe-2S iron-sulfur cluster binding domain COG34_RS22570 PF00970 Oxidoreductase FAD-binding domain COG34_RS22570 PF00175 Oxidoreductase NAD-binding domain COG34_RS22575 PF00355 Rieske [2Fe-2S] domain COG34_RS22575 PF00848 Ring hydroxylating alpha subunit (catalytic domain) COG34_RS22580 PF02028 BCCT, betaine/carnitine/choline family transporter COG34_RS22585 PF00180 Isocitrate/isopropylmalate dehydrogenase COG34_RS22590 PF03466 LysR substrate binding domain COG34_RS22590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS22595 PF01810 LysE type translocator COG34_RS22600 PF09313 Domain of unknown function (DUF1971) COG34_RS22605 PF08956 Domain of unknown function (DUF1869) COG34_RS22615 PF07282 Putative transposase DNA-binding domain COG34_RS22615 PF12323 Helix-turn-helix domain COG34_RS22615 PF01385 Probable transposase COG34_RS22620 PF04226 Transglycosylase associated protein COG34_RS22635 PF00990 Diguanylate cyclase, GGDEF domain COG34_RS22635 PF13185 GAF domain COG34_RS22640 PF03891 Domain of unknown function (DUF333) COG34_RS22645 PF04343 Protein of unknown function, DUF488 COG34_RS22650 PF07690 Major Facilitator Superfamily COG34_RS22655 PF02311 AraC-like ligand binding domain COG34_RS22655 PF12833 Helix-turn-helix domain COG34_RS22660 PF04284 Protein of unknown function (DUF441) COG34_RS22670 PF04073 Aminoacyl-tRNA editing domain COG34_RS22675 PF17155 Gammaproteobacterial periplasmic sensor domain COG34_RS22675 PF00990 Diguanylate cyclase, GGDEF domain COG34_RS22680 PF17158 Membrane-associated sensor, integral membrane domain COG34_RS22680 PF00990 Diguanylate cyclase, GGDEF domain COG34_RS22685 PF04285 Protein of unknown function (DUF444) COG34_RS22690 PF08298 PrkA AAA domain COG34_RS22690 PF06798 PrkA serine protein kinase C-terminal domain COG34_RS22695 PF06629 MltA-interacting protein MipA COG34_RS22700 PF00248 Aldo/keto reductase family COG34_RS22705 PF01263 Aldose 1-epimerase COG34_RS22710 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain COG34_RS22710 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain COG34_RS22715 PF01641 SelR domain COG34_RS22720 PF07023 Protein of unknown function (DUF1315) COG34_RS22725 PF00857 Isochorismatase family COG34_RS22730 PF00710 Asparaginase, N-terminal COG34_RS22730 PF17763 Glutaminase/Asparaginase C-terminal domain COG34_RS22735 PF01343 Peptidase family S49 COG34_RS22745 PF00881 Nitroreductase family COG34_RS22755 PF00586 AIR synthase related protein, N-terminal domain COG34_RS22755 PF02769 AIR synthase related protein, C-terminal domain COG34_RS22760 PF01131 DNA topoisomerase COG34_RS22760 PF01751 Toprim domain COG34_RS22770 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase COG34_RS22770 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain COG34_RS22775 PF07383 Protein of unknown function (DUF1496) COG34_RS22780 PF00293 NUDIX domain COG34_RS22785 PF01066 CDP-alcohol phosphatidyltransferase COG34_RS22790 PF00581 Rhodanese-like domain COG34_RS22795 PF00005 ABC transporter COG34_RS22800 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS22805 PF13416 Bacterial extracellular solute-binding protein COG34_RS22810 PF02627 Carboxymuconolactone decarboxylase family COG34_RS22815 PF09335 SNARE associated Golgi protein COG34_RS22825 PF09335 SNARE associated Golgi protein COG34_RS22830 PF03372 Endonuclease/Exonuclease/phosphatase family COG34_RS22840 PF00202 Aminotransferase class-III COG34_RS22845 PF04958 Arginine N-succinyltransferase beta subunit COG34_RS22850 PF00171 Aldehyde dehydrogenase family COG34_RS22855 PF04996 Succinylarginine dihydrolase COG34_RS22860 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family COG34_RS22865 PF07813 LTXXQ motif family protein COG34_RS22870 PF05962 HutD COG34_RS22880 PF02540 NAD synthase COG34_RS22885 PF04355 SmpA / OmlA family COG34_RS22895 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit COG34_RS22900 PF02378 Phosphotransferase system, EIIC COG34_RS22905 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit COG34_RS22910 PF07883 Cupin domain COG34_RS22910 PF12833 Helix-turn-helix domain COG34_RS22915 PF11975 Family 4 glycosyl hydrolase C-terminal domain COG34_RS22915 PF02056 Family 4 glycosyl hydrolase COG34_RS22920 PF04794 YdjC-like protein COG34_RS22925 PF18011 C-terminal domain found in long catalases COG34_RS22925 PF06628 Catalase-related immune-responsive COG34_RS22925 PF00199 Catalase COG34_RS22930 PF10729 Cell division activator CedA COG34_RS22945 PF00375 Sodium:dicarboxylate symporter family COG34_RS22950 PF04307 LexA-binding, inner membrane-associated putative hydrolase COG34_RS22955 PF13419 Haloacid dehalogenase-like hydrolase COG34_RS22960 PF14002 YniB-like protein COG34_RS22965 PF03881 Fructosamine kinase COG34_RS22970 PF11080 Endoribonuclease GhoS COG34_RS22975 PF00294 pfkB family carbohydrate kinase COG34_RS22980 PF04338 Protein of unknown function, DUF481 COG34_RS23000 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain COG34_RS23000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) COG34_RS23000 PF03129 Anticodon binding domain COG34_RS23000 PF02824 TGS domain COG34_RS23005 PF00707 Translation initiation factor IF-3, C-terminal domain COG34_RS23005 PF05198 Translation initiation factor IF-3, N-terminal domain COG34_RS23010 PF01632 Ribosomal protein L35 COG34_RS23015 PF00453 Ribosomal protein L20 COG34_RS23020 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain COG34_RS23020 PF01409 tRNA synthetases class II core domain (F) COG34_RS23025 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain COG34_RS23025 PF01588 Putative tRNA binding domain COG34_RS23025 PF03147 Ferredoxin-fold anticodon binding domain COG34_RS23025 PF03483 B3/4 domain COG34_RS23025 PF03484 tRNA synthetase B5 domain COG34_RS23030 PF00216 Bacterial DNA-binding protein COG34_RS23035 PF01032 FecCD transport family COG34_RS23040 PF00255 Glutathione peroxidase COG34_RS23045 PF00005 ABC transporter COG34_RS23050 PF00877 NlpC/P60 family COG34_RS23055 PF00563 EAL domain COG34_RS23060 PF02696 Uncharacterized ACR, YdiU/UPF0061 family COG34_RS23065 PF10636 Hemin uptake protein hemP COG34_RS23070 PF00793 DAHP synthetase I family COG34_RS23075 PF03618 Kinase/pyrophosphorylase COG34_RS23085 PF00391 PEP-utilising enzyme, mobile domain COG34_RS23085 PF02896 PEP-utilising enzyme, TIM barrel domain COG34_RS23085 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain COG34_RS23090 PF13193 AMP-binding enzyme C-terminal domain COG34_RS23090 PF00501 AMP-binding enzyme COG34_RS23100 PF01494 FAD binding domain COG34_RS23105 PF01012 Electron transfer flavoprotein domain COG34_RS23105 PF00766 Electron transfer flavoprotein FAD-binding domain COG34_RS23110 PF01012 Electron transfer flavoprotein domain COG34_RS23120 PF12833 Helix-turn-helix domain COG34_RS23120 PF02311 AraC-like ligand binding domain COG34_RS23125 PF00441 Acyl-CoA dehydrogenase, C-terminal domain COG34_RS23125 PF02770 Acyl-CoA dehydrogenase, middle domain COG34_RS23125 PF02771 Acyl-CoA dehydrogenase, N-terminal domain COG34_RS23130 PF01144 Coenzyme A transferase COG34_RS23135 PF01487 Type I 3-dehydroquinase COG34_RS23140 PF18317 Shikimate 5'-dehydrogenase C-terminal domain COG34_RS23140 PF08501 Shikimate dehydrogenase substrate binding domain COG34_RS23145 PF07690 Major Facilitator Superfamily COG34_RS23150 PF07690 Major Facilitator Superfamily COG34_RS23155 PF08965 Domain of unknown function (DUF1870) COG34_RS23165 PF01594 AI-2E family transporter COG34_RS23175 PF01565 FAD binding domain COG34_RS23175 PF02913 FAD linked oxidases, C-terminal domain COG34_RS23175 PF13183 4Fe-4S dicluster domain COG34_RS23180 PF03061 Thioesterase superfamily COG34_RS23185 PF15930 Domain of unknown function COG34_RS23190 PF01521 Iron-sulphur cluster biosynthesis COG34_RS23195 PF01458 Uncharacterized protein family (UPF0051) COG34_RS23200 PF00005 ABC transporter COG34_RS23205 PF01458 Uncharacterized protein family (UPF0051) COG34_RS23210 PF00266 Aminotransferase class-V COG34_RS23215 PF02657 Fe-S metabolism associated domain COG34_RS23220 PF17969 L,D-transpeptidase C-terminal domain COG34_RS23220 PF03734 L,D-transpeptidase catalytic domain COG34_RS23220 PF01476 LysM domain COG34_RS23225 PF04728 Lipoprotein leucine-zipper COG34_RS23230 PF00224 Pyruvate kinase, barrel domain COG34_RS23230 PF02887 Pyruvate kinase, alpha/beta domain COG34_RS23235 PF10965 Protein of unknown function (DUF2767) COG34_RS23240 PF13247 4Fe-4S dicluster domain COG34_RS23240 PF12800 4Fe-4S binding domain COG34_RS23245 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 COG34_RS23245 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain COG34_RS23255 PF13247 4Fe-4S dicluster domain COG34_RS23260 PF01292 Prokaryotic cytochrome b561 COG34_RS23270 PF13454 FAD-NAD(P)-binding COG34_RS23275 PF08803 Putative mono-oxygenase ydhR COG34_RS23290 PF16168 Adhesin of bacterial autotransporter system, probable stalk COG34_RS23290 PF03212 Pertactin COG34_RS23295 PF01554 MatE COG34_RS23300 PF00677 Lumazine binding domain COG34_RS23310 PF07690 Major Facilitator Superfamily COG34_RS23315 PF03466 LysR substrate binding domain COG34_RS23315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS23320 PF00356 Bacterial regulatory proteins, lacI family COG34_RS23335 PF07690 Major Facilitator Superfamily COG34_RS23340 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain COG34_RS23340 PF02777 Iron/manganese superoxide dismutases, C-terminal domain COG34_RS23345 PF00877 NlpC/P60 family COG34_RS23350 PF00462 Glutaredoxin COG34_RS23355 PF08494 DEAD/H associated COG34_RS23355 PF00271 Helicase conserved C-terminal domain COG34_RS23355 PF00270 DEAD/DEAH box helicase COG34_RS23360 PF00929 Exonuclease COG34_RS23365 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily COG34_RS23370 PF00724 NADH:flavin oxidoreductase / NADH oxidase family COG34_RS23375 PF16925 Tetracyclin repressor-like, C-terminal domain COG34_RS23375 PF00440 Bacterial regulatory proteins, tetR family COG34_RS23380 PF06945 Protein of unknown function (DUF1289) COG34_RS23385 PF00248 Aldo/keto reductase family COG34_RS23390 PF00080 Copper/zinc superoxide dismutase (SODC) COG34_RS23395 PF04632 Fusaric acid resistance protein family COG34_RS23400 PF00529 HlyD membrane-fusion protein of T1SS COG34_RS23400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion COG34_RS23405 PF07869 Protein of unknown function (DUF1656) COG34_RS23410 PF01047 MarR family COG34_RS23415 PF05433 Glycine zipper 2TM domain COG34_RS23420 PF03702 Anhydro-N-acetylmuramic acid kinase COG34_RS23425 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme COG34_RS23430 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region COG34_RS23430 PF01243 Pyridoxamine 5'-phosphate oxidase COG34_RS23435 PF00579 tRNA synthetases class I (W and Y) COG34_RS23435 PF01479 S4 domain COG34_RS23440 PF08543 Phosphomethylpyrimidine kinase COG34_RS23445 PF00043 Glutathione S-transferase, C-terminal domain COG34_RS23445 PF02798 Glutathione S-transferase, N-terminal domain COG34_RS23450 PF00854 POT family COG34_RS23460 PF00730 HhH-GPD superfamily base excision DNA repair protein COG34_RS23460 PF00633 Helix-hairpin-helix motif COG34_RS23460 PF10576 Iron-sulfur binding domain of endonuclease III COG34_RS23465 PF02508 Rnf-Nqr subunit, membrane protein COG34_RS23470 PF04205 FMN-binding domain COG34_RS23475 PF03116 NQR2, RnfD, RnfE family COG34_RS23480 PF13375 RnfC Barrel sandwich hybrid domain COG34_RS23480 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit COG34_RS23480 PF10531 SLBB domain COG34_RS23480 PF12838 4Fe-4S dicluster domain COG34_RS23485 PF04060 Putative Fe-S cluster COG34_RS23490 PF02508 Rnf-Nqr subunit, membrane protein COG34_RS23495 PF10754 Protein of unknown function (DUF2569) COG34_RS23500 PF05321 Haemolysin expression modulating protein COG34_RS23515 PF02894 Oxidoreductase family, C-terminal alpha/beta domain COG34_RS23515 PF01408 Oxidoreductase family, NAD-binding Rossmann fold COG34_RS23520 PF00962 Adenosine/AMP deaminase COG34_RS23525 PF00155 Aminotransferase class I and II COG34_RS23530 PF00367 phosphotransferase system, EIIB COG34_RS23530 PF02378 Phosphotransferase system, EIIC COG34_RS23535 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family COG34_RS23535 PF00356 Bacterial regulatory proteins, lacI family COG34_RS23545 PF00440 Bacterial regulatory proteins, tetR family COG34_RS23550 PF02836 Glycosyl hydrolases family 2, TIM barrel domain COG34_RS23550 PF00703 Glycosyl hydrolases family 2 COG34_RS23550 PF02837 Glycosyl hydrolases family 2, sugar binding domain COG34_RS23560 PF03573 outer membrane porin, OprD family COG34_RS23565 PF06097 Bacterial protein of unknown function (DUF945) COG34_RS23570 PF01238 Phosphomannose isomerase type I COG34_RS23575 PF05683 Fumarase C-terminus COG34_RS23575 PF05681 Fumarate hydratase (Fumerase) COG34_RS23580 PF10415 Fumarase C C-terminus COG34_RS23580 PF00206 Lyase COG34_RS23585 PF05472 DNA replication terminus site-binding protein (Ter protein) COG34_RS23590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS23590 PF00672 HAMP domain COG34_RS23590 PF00512 His Kinase A (phospho-acceptor) domain COG34_RS23595 PF00072 Response regulator receiver domain COG34_RS23595 PF00486 Transcriptional regulatory protein, C terminal COG34_RS23600 PF06942 GlpM protein COG34_RS23610 PF13520 Amino acid permease COG34_RS23620 PF07338 Protein of unknown function (DUF1471) COG34_RS23625 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch COG34_RS23625 PF05222 Alanine dehydrogenase/PNT, N-terminal domain COG34_RS23625 PF01262 Alanine dehydrogenase/PNT, C-terminal domain COG34_RS23630 PF02233 NAD(P) transhydrogenase beta subunit COG34_RS23635 PF01594 AI-2E family transporter COG34_RS23645 PF00893 Small Multidrug Resistance protein COG34_RS23650 PF00893 Small Multidrug Resistance protein COG34_RS23655 PF00089 Trypsin COG34_RS23675 PF07690 Major Facilitator Superfamily COG34_RS23680 PF03466 LysR substrate binding domain COG34_RS23680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS23685 PF00480 ROK family COG34_RS23695 PF00654 Voltage gated chloride channel COG34_RS23700 PF02613 Nitrate reductase delta subunit COG34_RS23705 PF04976 DMSO reductase anchor subunit (DmsC) COG34_RS23710 PF13247 4Fe-4S dicluster domain COG34_RS23710 PF12800 4Fe-4S binding domain COG34_RS23715 PF04879 Molybdopterin oxidoreductase Fe4S4 domain COG34_RS23715 PF00384 Molybdopterin oxidoreductase COG34_RS23715 PF01568 Molydopterin dinucleotide binding domain COG34_RS23720 PF01568 Molydopterin dinucleotide binding domain COG34_RS23720 PF00384 Molybdopterin oxidoreductase COG34_RS23720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain COG34_RS23725 PF06649 Protein of unknown function (DUF1161) COG34_RS23730 PF06788 Uncharacterised protein family (UPF0257) COG34_RS23735 PF13302 Acetyltransferase (GNAT) domain COG34_RS23740 PF06932 Protein of unknown function (DUF1283) COG34_RS23745 PF02694 Uncharacterised BCR, YnfA/UPF0060 family COG34_RS23755 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain COG34_RS23755 PF13378 Enolase C-terminal domain-like COG34_RS23760 PF00107 Zinc-binding dehydrogenase COG34_RS23760 PF08240 Alcohol dehydrogenase GroES-like domain COG34_RS23770 PF00589 Phage integrase family COG34_RS23770 PF12167 Arm DNA-binding domain COG34_RS23785 PF07358 Protein of unknown function (DUF1482) COG34_RS23790 PF05358 DicB protein COG34_RS23800 PF07151 Protein of unknown function (DUF1391) COG34_RS23825 PF17948 DnaT DNA-binding domain COG34_RS23845 PF01848 Hok/gef family COG34_RS23855 PF06147 Protein of unknown function (DUF968) COG34_RS23860 PF05866 Endodeoxyribonuclease RusA COG34_RS23865 PF03589 Antitermination protein COG34_RS23895 PF06519 TolA C-terminal COG34_RS23905 PF04971 Bacteriophage P21 holin S COG34_RS23910 PF07041 Protein of unknown function (DUF1327) COG34_RS23915 PF00959 Phage lysozyme COG34_RS23920 PF10721 Protein of unknown function (DUF2514) COG34_RS23925 PF00313 'Cold-shock' DNA-binding domain COG34_RS23940 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system COG34_RS23990 PF00574 Clp protease COG34_RS24060 PF06316 Enterobacterial Ail/Lom protein COG34_RS24065 PF08400 Prophage tail fibre N-terminal COG34_RS24065 PF03335 Phage tail fibre repeat COG34_RS24065 PF07484 Phage Tail Collar Domain COG34_RS24070 PF02413 Caudovirales tail fibre assembly protein, lambda gpK COG34_RS24080 PF00083 Sugar (and other) transporter COG34_RS24080 PF07690 Major Facilitator Superfamily COG34_RS24085 PF01232 Mannitol dehydrogenase Rossmann domain COG34_RS24085 PF08125 Mannitol dehydrogenase C-terminal domain COG34_RS24090 PF14001 YdfZ protein COG34_RS24095 PF00392 Bacterial regulatory proteins, gntR family COG34_RS24095 PF07729 FCD domain COG34_RS24100 PF00106 short chain dehydrogenase COG34_RS24110 PF01432 Peptidase family M3 COG34_RS24120 PF02464 Competence-damaged protein COG34_RS24125 PF04076 Bacterial OB fold (BOF) protein COG34_RS24130 PF00990 Diguanylate cyclase, GGDEF domain COG34_RS24140 PF07690 Major Facilitator Superfamily COG34_RS24145 PF00892 EamA-like transporter family COG34_RS24150 PF07702 UTRA domain COG34_RS24150 PF00392 Bacterial regulatory proteins, gntR family COG34_RS24155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit COG34_RS24160 PF02378 Phosphotransferase system, EIIC COG34_RS24165 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit COG34_RS24170 PF02264 LamB porin COG34_RS24170 PF11471 Maltoporin periplasmic N-terminal extension COG34_RS24180 PF13999 MarB protein COG34_RS24185 PF12833 Helix-turn-helix domain COG34_RS24190 PF01047 MarR family COG34_RS24195 PF01914 MarC family integral membrane protein COG34_RS24200 PF07690 Major Facilitator Superfamily COG34_RS24215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS24215 PF03466 LysR substrate binding domain COG34_RS24220 PF00171 Aldehyde dehydrogenase family COG34_RS24225 PF04960 Glutaminase COG34_RS24230 PF13811 Domain of unknown function (DUF4186) COG34_RS24240 PF00990 Diguanylate cyclase, GGDEF domain COG34_RS24250 PF08125 Mannitol dehydrogenase C-terminal domain COG34_RS24250 PF01232 Mannitol dehydrogenase Rossmann domain COG34_RS24260 PF01062 Bestrophin, RFP-TM, chloride channel COG34_RS24265 PF13649 Methyltransferase domain COG34_RS24270 PF03992 Antibiotic biosynthesis monooxygenase COG34_RS24275 PF01791 DeoC/LacD family aldolase COG34_RS24280 PF13407 Periplasmic binding protein domain COG34_RS24285 PF02653 Branched-chain amino acid transport system / permease component COG34_RS24290 PF02653 Branched-chain amino acid transport system / permease component COG34_RS24295 PF00005 ABC transporter COG34_RS24300 PF04198 Putative sugar-binding domain COG34_RS24305 PF02782 FGGY family of carbohydrate kinases, C-terminal domain COG34_RS24305 PF00370 FGGY family of carbohydrate kinases, N-terminal domain COG34_RS24310 PF13018 Extended Signal Peptide of Type V secretion system COG34_RS24315 PF01381 Helix-turn-helix COG34_RS24320 PF07804 HipA-like C-terminal domain COG34_RS24320 PF13657 HipA N-terminal domain COG34_RS24340 PF00419 Fimbrial protein COG34_RS24345 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain COG34_RS24345 PF02753 Pili assembly chaperone PapD, C-terminal domain COG34_RS24350 PF13953 PapC C-terminal domain COG34_RS24350 PF00577 Outer membrane usher protein COG34_RS24350 PF13954 PapC N-terminal domain COG34_RS24355 PF00419 Fimbrial protein COG34_RS24360 PF00419 Fimbrial protein COG34_RS24365 PF09160 FimH, mannose binding COG34_RS24370 PF00384 Molybdopterin oxidoreductase COG34_RS24375 PF17073 Two-component-system connector protein COG34_RS24380 PF12833 Helix-turn-helix domain COG34_RS24385 PF00884 Sulfatase COG34_RS24395 PF00005 ABC transporter COG34_RS24395 PF06472 ABC transporter transmembrane region 2 COG34_RS24400 PF07715 TonB-dependent Receptor Plug Domain COG34_RS24405 PF05193 Peptidase M16 inactive domain COG34_RS24405 PF00675 Insulinase (Peptidase family M16) COG34_RS24410 PF00282 Pyridoxal-dependent decarboxylase conserved domain COG34_RS24415 PF13520 Amino acid permease COG34_RS24420 PF02638 Glycosyl hydrolase-like 10 COG34_RS24425 PF00990 Diguanylate cyclase, GGDEF domain COG34_RS24430 PF13426 PAS domain COG34_RS24430 PF00563 EAL domain COG34_RS24430 PF00990 Diguanylate cyclase, GGDEF domain COG34_RS24435 PF01427 D-ala-D-ala dipeptidase COG34_RS24440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle COG34_RS24445 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS24450 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS24450 PF12911 N-terminal TM domain of oligopeptide transport permease C COG34_RS24455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region COG34_RS24455 PF00005 ABC transporter COG34_RS24460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region COG34_RS24460 PF00005 ABC transporter COG34_RS24465 PF02566 OsmC-like protein COG34_RS24475 PF10684 Putative biofilm-dependent modulation protein COG34_RS24480 PF08136 30S ribosomal protein subunit S22 family COG34_RS24485 PF03949 Malic enzyme, NAD binding domain COG34_RS24485 PF00390 Malic enzyme, N-terminal domain COG34_RS24490 PF08240 Alcohol dehydrogenase GroES-like domain COG34_RS24490 PF00107 Zinc-binding dehydrogenase COG34_RS24495 PF01381 Helix-turn-helix COG34_RS24500 PF01292 Prokaryotic cytochrome b561 COG34_RS24505 PF13247 4Fe-4S dicluster domain COG34_RS24505 PF12800 4Fe-4S binding domain COG34_RS24505 PF09163 Formate dehydrogenase N, transmembrane COG34_RS24515 PF00892 EamA-like transporter family COG34_RS24520 PF00267 Gram-negative porin COG34_RS24530 PF07690 Major Facilitator Superfamily COG34_RS24535 PF01568 Molydopterin dinucleotide binding domain COG34_RS24535 PF14710 Respiratory nitrate reductase alpha N-terminal COG34_RS24535 PF00384 Molybdopterin oxidoreductase COG34_RS24540 PF13247 4Fe-4S dicluster domain COG34_RS24540 PF14711 Respiratory nitrate reductase beta C-terminal COG34_RS24545 PF02613 Nitrate reductase delta subunit COG34_RS24550 PF02665 Nitrate reductase gamma subunit COG34_RS24555 PF02567 Phenazine biosynthesis-like protein COG34_RS24560 PF00797 N-acetyltransferase COG34_RS24565 PF01613 Flavin reductase like domain COG34_RS24570 PF01361 Tautomerase enzyme COG34_RS24590 PF13007 Transposase C of IS166 homeodomain COG34_RS24590 PF13817 IS66 C-terminal element COG34_RS24590 PF03050 Transposase IS66 family COG34_RS24590 PF13005 zinc-finger binding domain of transposase IS66 COG34_RS24595 PF05717 IS66 Orf2 like protein COG34_RS24605 PF13007 Transposase C of IS166 homeodomain COG34_RS24605 PF13005 zinc-finger binding domain of transposase IS66 COG34_RS24605 PF13817 IS66 C-terminal element COG34_RS24605 PF03050 Transposase IS66 family COG34_RS24610 PF05717 IS66 Orf2 like protein COG34_RS24615 PF00665 Integrase core domain COG34_RS24615 PF13276 HTH-like domain COG34_RS24615 PF01527 Transposase COG34_RS24660 PF14220 Domain of unknown function (DUF4329) COG34_RS24660 PF03527 RHS protein COG34_RS24660 PF05593 RHS Repeat COG34_RS24670 PF17520 Family of unknown function (DUF5445) COG34_RS24675 PF13417 Glutathione S-transferase, N-terminal domain COG34_RS24680 PF00324 Amino acid permease COG34_RS24700 PF00593 TonB dependent receptor COG34_RS24700 PF07715 TonB-dependent Receptor Plug Domain COG34_RS24705 PF00392 Bacterial regulatory proteins, gntR family COG34_RS24705 PF07729 FCD domain COG34_RS24710 PF16884 N-terminal domain of oxidoreductase COG34_RS24710 PF00107 Zinc-binding dehydrogenase COG34_RS24720 PF00583 Acetyltransferase (GNAT) family COG34_RS24725 PF04657 Putative inner membrane exporter, YdcZ COG34_RS24730 PF10735 Protein of unknown function (DUF2526) COG34_RS24735 PF10753 Toxin GhoT_OrtT COG34_RS24750 PF00171 Aldehyde dehydrogenase family COG34_RS24755 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS24760 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS24765 PF08402 TOBE domain COG34_RS24765 PF00005 ABC transporter COG34_RS24785 PF00155 Aminotransferase class I and II COG34_RS24785 PF00392 Bacterial regulatory proteins, gntR family COG34_RS24790 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system COG34_RS24790 PF01381 Helix-turn-helix COG34_RS24795 PF07927 HicA toxin of bacterial toxin-antitoxin, COG34_RS24800 PF10829 Protein of unknown function (DUF2554) COG34_RS24805 PF12392 Collagenase COG34_RS24805 PF01136 Peptidase family U32 COG34_RS24810 PF07883 Cupin domain COG34_RS24810 PF01381 Helix-turn-helix COG34_RS24815 PF03594 Benzoate membrane transport protein COG34_RS24820 PF01385 Probable transposase COG34_RS24820 PF07282 Putative transposase DNA-binding domain COG34_RS24820 PF12323 Helix-turn-helix domain COG34_RS24830 PF11769 Protein of unknown function (DUF3313) COG34_RS24835 PF03848 Tellurite resistance protein TehB COG34_RS24840 PF03595 Voltage-dependent anion channel COG34_RS24845 PF18836 Beta solenoid repeat from YDCK COG34_RS24850 PF13302 Acetyltransferase (GNAT) domain COG34_RS24855 PF04325 Protein of unknown function (DUF465) COG34_RS24865 PF04349 Periplasmic glucan biosynthesis protein, MdoG COG34_RS24875 PF07063 Domain of unknown function (DUF1338) COG34_RS24880 PF03466 LysR substrate binding domain COG34_RS24880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS24885 PF00672 HAMP domain COG34_RS24885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain COG34_RS24885 PF02203 Tar ligand binding domain homologue COG34_RS24890 PF01848 Hok/gef family COG34_RS24900 PF01292 Prokaryotic cytochrome b561 COG34_RS24905 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain COG34_RS24905 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain COG34_RS24910 PF00171 Aldehyde dehydrogenase family COG34_RS24915 PF02698 DUF218 domain COG34_RS24920 PF11898 Domain of unknown function (DUF3418) COG34_RS24920 PF04408 Helicase associated domain (HA2) COG34_RS24920 PF00270 DEAD/DEAH box helicase COG34_RS24920 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold COG34_RS24920 PF00271 Helicase conserved C-terminal domain COG34_RS24925 PF02525 Flavodoxin-like fold COG34_RS24930 PF00782 Dual specificity phosphatase, catalytic domain COG34_RS24935 PF12146 Serine aminopeptidase, S33 COG34_RS24935 PF12147 Putative methyltransferase COG34_RS24945 PF01066 CDP-alcohol phosphatidyltransferase COG34_RS24955 PF00248 Aldo/keto reductase family COG34_RS24960 PF00132 Bacterial transferase hexapeptide (six repeats) COG34_RS24965 PF08223 PaaX-like protein C-terminal domain COG34_RS24965 PF07848 PaaX-like protein COG34_RS24970 PF14535 AMP-binding enzyme C-terminal domain COG34_RS24970 PF00501 AMP-binding enzyme COG34_RS24975 PF00108 Thiolase, N-terminal domain COG34_RS24975 PF02803 Thiolase, C-terminal domain COG34_RS24980 PF03061 Thioesterase superfamily COG34_RS24985 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain COG34_RS24985 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain COG34_RS24985 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain COG34_RS24990 PF00378 Enoyl-CoA hydratase/isomerase COG34_RS24995 PF00378 Enoyl-CoA hydratase/isomerase COG34_RS25000 PF00970 Oxidoreductase FAD-binding domain COG34_RS25000 PF00175 Oxidoreductase NAD-binding domain COG34_RS25000 PF00111 2Fe-2S iron-sulfur cluster binding domain COG34_RS25005 PF01883 Iron-sulfur cluster assembly protein COG34_RS25010 PF05138 Phenylacetic acid catabolic protein COG34_RS25015 PF06243 Phenylacetic acid degradation B COG34_RS25020 PF05138 Phenylacetic acid catabolic protein COG34_RS25025 PF01575 MaoC like domain COG34_RS25025 PF00171 Aldehyde dehydrogenase family COG34_RS25030 PF02727 Copper amine oxidase, N2 domain COG34_RS25030 PF07833 Copper amine oxidase N-terminal domain COG34_RS25030 PF01179 Copper amine oxidase, enzyme domain COG34_RS25030 PF02728 Copper amine oxidase, N3 domain COG34_RS25035 PF00171 Aldehyde dehydrogenase family COG34_RS25040 PF14525 AraC-binding-like domain COG34_RS25040 PF12833 Helix-turn-helix domain COG34_RS25045 PF07027 Protein of unknown function (DUF1318) COG34_RS25050 PF13617 YnbE-like lipoprotein COG34_RS25055 PF11739 Dicarboxylate transport COG34_RS25060 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain COG34_RS25060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain COG34_RS25065 PF03724 META domain COG34_RS25070 PF03891 Domain of unknown function (DUF333) COG34_RS25075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain COG34_RS25075 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase COG34_RS25075 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II COG34_RS25075 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg COG34_RS25075 PF10371 Domain of unknown function COG34_RS25080 PF00267 Gram-negative porin COG34_RS25085 PF00582 Universal stress protein family COG34_RS25090 PF01171 PP-loop family COG34_RS25095 PF00270 DEAD/DEAH box helicase COG34_RS25095 PF00271 Helicase conserved C-terminal domain COG34_RS25095 PF03880 DbpA RNA binding domain COG34_RS25105 PF01544 CorA-like Mg2+ transporter protein COG34_RS25110 PF00990 Diguanylate cyclase, GGDEF domain COG34_RS25110 PF08448 PAS fold COG34_RS25115 PF01713 Smr domain COG34_RS25125 PF03466 LysR substrate binding domain COG34_RS25125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS25130 PF01546 Peptidase family M20/M25/M40 COG34_RS25130 PF07687 Peptidase dimerisation domain COG34_RS25135 PF01546 Peptidase family M20/M25/M40 COG34_RS25150 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain COG34_RS25150 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain COG34_RS25155 PF00027 Cyclic nucleotide-binding domain COG34_RS25155 PF00325 Bacterial regulatory proteins, crp family COG34_RS25160 PF00582 Universal stress protein family COG34_RS25165 PF10749 Protein of unknown function (DUF2534) COG34_RS25170 PF00924 Mechanosensitive ion channel COG34_RS25175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle COG34_RS25180 PF03466 LysR substrate binding domain COG34_RS25180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS25185 PF12146 Serine aminopeptidase, S33 COG34_RS25195 PF00246 Zinc carboxypeptidase COG34_RS25200 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain COG34_RS25200 PF13378 Enolase C-terminal domain-like COG34_RS25205 PF08534 Redoxin COG34_RS25210 PF00158 Sigma-54 interaction domain COG34_RS25210 PF13188 PAS domain COG34_RS25210 PF18024 Helix-turn-helix domain COG34_RS25215 PF05128 Domain of unknown function (DUF697) COG34_RS25220 PF04317 YcjX-like family, DUF463 COG34_RS25225 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family COG34_RS25225 PF00356 Bacterial regulatory proteins, lacI family COG34_RS25230 PF09381 Outer membrane protein G (OmpG) COG34_RS25235 PF17912 MalK OB fold domain COG34_RS25235 PF00005 ABC transporter COG34_RS25235 PF03459 TOBE domain COG34_RS25240 PF13419 Haloacid dehalogenase-like hydrolase COG34_RS25245 PF03632 Glycosyl hydrolase family 65 central catalytic domain COG34_RS25245 PF03636 Glycosyl hydrolase family 65, N-terminal domain COG34_RS25245 PF03633 Glycosyl hydrolase family 65, C-terminal domain COG34_RS25250 PF02894 Oxidoreductase family, C-terminal alpha/beta domain COG34_RS25250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold COG34_RS25255 PF01261 Xylose isomerase-like TIM barrel COG34_RS25260 PF00107 Zinc-binding dehydrogenase COG34_RS25265 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS25270 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS25275 PF01547 Bacterial extracellular solute-binding protein COG34_RS25285 PF00581 Rhodanese-like domain COG34_RS25290 PF09584 Phage shock protein PspD (Phageshock_PspD) COG34_RS25295 PF04024 PspC domain COG34_RS25300 PF06667 Phage shock protein B COG34_RS25305 PF04012 PspA/IM30 family COG34_RS25310 PF00158 Sigma-54 interaction domain COG34_RS25310 PF02954 Bacterial regulatory protein, Fis family COG34_RS25315 PF00202 Aminotransferase class-III COG34_RS25320 PF01266 FAD dependent oxidoreductase COG34_RS25325 PF00171 Aldehyde dehydrogenase family COG34_RS25335 PF07883 Cupin domain COG34_RS25335 PF01381 Helix-turn-helix COG34_RS25340 PF07722 Peptidase C26 COG34_RS25345 PF00120 Glutamine synthetase, catalytic domain COG34_RS25355 PF10820 Protein of unknown function (DUF2543) COG34_RS25365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle COG34_RS25370 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS25375 PF12911 N-terminal TM domain of oligopeptide transport permease C COG34_RS25375 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS25380 PF00005 ABC transporter COG34_RS25380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region COG34_RS25385 PF00005 ABC transporter COG34_RS25390 PF04480 Protein of unknown function (DUF559) COG34_RS25410 PF17876 Cold shock domain COG34_RS25410 PF08206 Ribonuclease B OB domain COG34_RS25410 PF00773 RNB domain COG34_RS25410 PF00575 S1 RNA binding domain COG34_RS25420 PF13426 PAS domain COG34_RS25420 PF00563 EAL domain COG34_RS25420 PF00990 Diguanylate cyclase, GGDEF domain COG34_RS25430 PF00455 DeoR C terminal sensor domain COG34_RS25430 PF08220 DeoR-like helix-turn-helix domain COG34_RS25435 PF05433 Glycine zipper 2TM domain COG34_RS25440 PF01253 Translation initiation factor SUI1 COG34_RS25445 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family COG34_RS25450 PF18073 Rubredoxin metal binding domain COG34_RS25455 PF06305 Lipopolysaccharide assembly protein A domain COG34_RS25460 PF01569 PAP2 superfamily COG34_RS25465 PF00925 GTP cyclohydrolase II COG34_RS25470 PF00330 Aconitase family (aconitate hydratase) COG34_RS25470 PF00694 Aconitase C-terminal domain COG34_RS25490 PF03466 LysR substrate binding domain COG34_RS25490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COG34_RS25500 PF01396 Topoisomerase DNA binding C4 zinc finger COG34_RS25500 PF01751 Toprim domain COG34_RS25500 PF01131 DNA topoisomerase COG34_RS25500 PF08272 Topoisomerase I zinc-ribbon-like COG34_RS25510 PF10692 Protein of unknown function (DUF2498) COG34_RS25515 PF08496 Peptidase family S49 N-terminal COG34_RS25515 PF01343 Peptidase family S49 COG34_RS25520 PF00106 short chain dehydrogenase COG34_RS25525 PF12557 Cob(I)alamin adenosyltransferase N terminal COG34_RS25525 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP COG34_RS25530 PF01479 S4 domain COG34_RS25530 PF00849 RNA pseudouridylate synthase COG34_RS25535 PF01300 Telomere recombination COG34_RS25540 PF02811 PHP domain COG34_RS25545 PF08255 Trp-operon Leader Peptide COG34_RS25550 PF00425 chorismate binding enzyme COG34_RS25550 PF04715 Anthranilate synthase component I, N terminal region COG34_RS25555 PF00117 Glutamine amidotransferase class-I COG34_RS25555 PF02885 Glycosyl transferase family, helical bundle domain COG34_RS25555 PF00591 Glycosyl transferase family, a/b domain COG34_RS25560 PF00218 Indole-3-glycerol phosphate synthase COG34_RS25560 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase COG34_RS25565 PF00291 Pyridoxal-phosphate dependent enzyme COG34_RS25570 PF00290 Tryptophan synthase alpha chain COG34_RS25575 PF10685 Stress-induced bacterial acidophilic repeat motif COG34_RS25580 PF05974 Domain of unknown function (DUF892) COG34_RS25585 PF05974 Domain of unknown function (DUF892) COG34_RS25590 PF03922 OmpW family COG34_RS25605 PF04279 Intracellular septation protein A COG34_RS25610 PF03061 Thioesterase superfamily COG34_RS25615 PF03544 Gram-negative bacterial TonB protein C-terminal COG34_RS25620 PF03795 YCII-related domain COG34_RS25625 PF07885 Ion channel COG34_RS25625 PF02254 TrkA-N domain COG34_RS25635 PF13091 PLD-like domain COG34_RS25635 PF13396 Phospholipase_D-nuclease N-terminal COG34_RS25640 PF04269 Protein of unknown function, DUF440 COG34_RS25645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region COG34_RS25645 PF00005 ABC transporter COG34_RS25650 PF00005 ABC transporter COG34_RS25650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region COG34_RS25655 PF12911 N-terminal TM domain of oligopeptide transport permease C COG34_RS25655 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS25660 PF00528 Binding-protein-dependent transport system inner membrane component COG34_RS25665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle COG34_RS25675 PF01914 MarC family integral membrane protein COG34_RS25680 PF00465 Iron-containing alcohol dehydrogenase COG34_RS25680 PF00171 Aldehyde dehydrogenase family COG34_RS25685 PF00265 Thymidine kinase COG34_RS25690 PF00816 H-NS histone family COG34_RS25695 PF00483 Nucleotidyl transferase COG34_RS25700 PF00072 Response regulator receiver domain COG34_RS25705 PF01734 Patatin-like phospholipase COG34_RS25710 PF02810 SEC-C motif COG34_RS25715 PF01842 ACT domain COG34_RS25715 PF00551 Formyl transferase COG34_RS25735 PF02665 Nitrate reductase gamma subunit COG34_RS25740 PF02613 Nitrate reductase delta subunit COG34_RS25745 PF14711 Respiratory nitrate reductase beta C-terminal COG34_RS25745 PF13247 4Fe-4S dicluster domain COG34_RS25750 PF00384 Molybdopterin oxidoreductase COG34_RS25750 PF01568 Molydopterin dinucleotide binding domain COG34_RS25750 PF14710 Respiratory nitrate reductase alpha N-terminal COG34_RS25755 PF07690 Major Facilitator Superfamily COG34_RS25765 PF07730 Histidine kinase COG34_RS25765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COG34_RS25765 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term COG34_RS25765 PF00672 HAMP domain COG34_RS25770 PF00196 Bacterial regulatory proteins, luxR family COG34_RS25770 PF00072 Response regulator receiver domain COG34_RS25775 PF11924 Inverse autotransporter, beta-domain COG34_RS25780 PF02635 DsrE/DsrF-like family COG34_RS25785 PF04752 ChaC-like protein COG34_RS25790 PF06150 ChaB COG34_RS25795 PF01699 Sodium/calcium exchanger protein COG34_RS25800 PF13940 Toxin Ldr, type I toxin-antitoxin system COG34_RS25805 PF13940 Toxin Ldr, type I toxin-antitoxin system COG34_RS25815 PF00793 DAHP synthetase I family COG34_RS25820 PF13369 Transglutaminase-like superfamily COG34_RS25825 PF04247 Invasion gene expression up-regulator, SirB COG34_RS25830 PF17827 PrmC N-terminal domain COG34_RS25830 PF13847 Methyltransferase domain COG34_RS25835 PF18071 HMW1C N-terminal COG34_RS25835 PF18254 HMW1 domain 2 COG34_RS25850 PF02796 Helix-turn-helix domain of resolvase COG34_RS25850 PF00239 Resolvase, N terminal domain COG34_RS25860 PF13007 Transposase C of IS166 homeodomain COG34_RS25860 PF13817 IS66 C-terminal element COG34_RS25860 PF13005 zinc-finger binding domain of transposase IS66 COG34_RS25860 PF03050 Transposase IS66 family COG34_RS25865 PF05717 IS66 Orf2 like protein COG34_RS25870 PF01527 Transposase COG34_RS25870 PF13276 HTH-like domain COG34_RS25870 PF00665 Integrase core domain COG34_RS25885 PF00665 Integrase core domain COG34_RS25915 PF01526 Tn3 transposase DDE domain COG34_RS25915 PF13700 Domain of unknown function (DUF4158) COG34_RS25920 PF13700 Domain of unknown function (DUF4158) COG34_RS25920 PF01526 Tn3 transposase DDE domain COG34_RS25930 PF00005 ABC transporter COG34_RS25960 PF02048 Heat-stable enterotoxin ST COG34_RS25965 PF01695 IstB-like ATP binding protein COG34_RS25985 PF05717 IS66 Orf2 like protein COG34_RS25995 PF01609 Transposase DDE domain COG34_RS25995 PF05598 Transposase domain (DUF772) COG34_RS26040 PF00436 Single-strand binding protein family COG34_RS26045 PF06006 Bacterial protein of unknown function (DUF905) COG34_RS26050 PF02195 ParB-like nuclease domain COG34_RS26055 PF06290 Plasmid SOS inhibition protein (PsiB) COG34_RS26060 PF06952 PsiA protein COG34_RS26070 PF01848 Hok/gef family COG34_RS26100 PF01464 Transglycosylase SLT domain COG34_RS26105 PF05261 TraM protein, DNA-binding COG34_RS26115 PF05513 TraA COG34_RS26120 PF07178 TraL protein COG34_RS26125 PF05309 TraE protein COG34_RS26135 PF03743 Bacterial conjugation TrbI-like protein COG34_RS26140 PF01258 Prokaryotic dksA/traR C4-type zinc finger COG34_RS26155 PF09676 Type IV conjugative transfer system lipoprotein (TraV) COG34_RS26160 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer COG34_RS26165 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) COG34_RS26170 PF12477 Sex factor F TraW protein N terminal COG34_RS26175 PF06834 TraU protein COG34_RS26185 PF09673 Type-F conjugative transfer system pilin assembly protein COG34_RS26190 PF06986 Type-1V conjugative transfer system mating pair stabilisation COG34_RS26200 PF13728 F plasmid transfer operon protein COG34_RS26205 PF06122 Conjugative relaxosome accessory transposon protein COG34_RS26210 PF07916 TraG-like protein, N-terminal region COG34_RS26220 PF05818 Enterobacterial TraT complement resistance protein COG34_RS26225 PF10412 Type IV secretion-system coupling protein DNA-binding domain COG34_RS26225 PF12615 F sex factor protein N terminal COG34_RS26230 PF18272 single-stranded DNA binding TraI N-terminal subdomain COG34_RS26230 PF18340 DNA relaxase TraI 2B/2B-like domain COG34_RS26230 PF08751 TrwC relaxase COG34_RS26230 PF07057 DNA helicase TraI COG34_RS26240 PF05857 TraX protein COG34_RS26250 PF10723 Replication regulatory protein RepB COG34_RS26260 PF08048 Tap RepA1 leader peptide COG34_RS26265 PF02387 IncFII RepA protein family COG34_RS26325 PF03050 Transposase IS66 family COG34_RS26325 PF13817 IS66 C-terminal element COG34_RS26325 PF13007 Transposase C of IS166 homeodomain COG34_RS26325 PF13005 zinc-finger binding domain of transposase IS66 COG34_RS26330 PF05717 IS66 Orf2 like protein COG34_RS26335 PF01527 Transposase COG34_RS26335 PF00665 Integrase core domain COG34_RS26335 PF13276 HTH-like domain COG34_RS26355 PF00589 Phage integrase family COG34_RS26390 PF04449 CS1 type fimbrial major subunit COG34_RS26395 PF04449 CS1 type fimbrial major subunit COG34_RS26400 PF15976 CS1-pili formation C-terminal COG34_RS26400 PF16967 E-set like domain COG34_RS26400 PF17271 TcfC Usher-like barrel domain COG34_RS26405 PF07434 CblD like pilus biogenesis initiator COG34_RS26410 PF12833 Helix-turn-helix domain COG34_RS26420 PF06445 GyrI-like small molecule binding domain COG34_RS26420 PF12833 Helix-turn-helix domain COG34_RS26455 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH COG34_RS26470 PF00589 Phage integrase family COG34_RS26475 PF01051 Initiator Replication protein COG34_RS26540 PF10609 NUBPL iron-transfer P-loop NTPase COG34_RS26620 PF03526 Colicin E1 (microcin) immunity protein COG34_RS26625 PF11504 Colicin Ia COG34_RS26625 PF01024 Colicin pore forming domain COG34_RS26630 PF00665 Integrase core domain COG34_RS26630 PF13276 HTH-like domain COG34_RS26630 PF01527 Transposase COG34_RS26635 PF05717 IS66 Orf2 like protein COG34_RS26640 PF13007 Transposase C of IS166 homeodomain COG34_RS26640 PF13817 IS66 C-terminal element COG34_RS26640 PF13005 zinc-finger binding domain of transposase IS66 COG34_RS26640 PF03050 Transposase IS66 family COG34_RS26655 PF13542 Helix-turn-helix domain of transposase family ISL3 COG34_RS26655 PF01610 Transposase COG34_RS26655 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 COG34_RS26660 PF06183 DinI-like family COG34_RS26665 PF00717 Peptidase S24-like COG34_RS26670 PF00817 impB/mucB/samB family COG34_RS26670 PF13438 Domain of unknown function (DUF4113) COG34_RS26670 PF11799 impB/mucB/samB family C-terminal domain COG34_RS26680 PF06406 StbA protein COG34_RS26695 PF00589 Phage integrase family COG34_RS26715 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin COG34_RS26720 PF01850 PIN domain COG34_RS26795 PF08479 POTRA domain, ShlB-type COG34_RS26795 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB