locus-tag	class	description
ILQ59_RS00015	COG3312	ion transport
ILQ59_RS00065	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ILQ59_RS00090	COG3539	Fimbrial protein
ILQ59_RS00100	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ILQ59_RS00105	COG0573	inorganic phosphate transmembrane transporter activity
ILQ59_RS00110	COG0581	inorganic phosphate transmembrane transporter activity
ILQ59_RS00115	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
ILQ59_RS00120	COG0704	Plays a role in the regulation of phosphate uptake
ILQ59_RS00145	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ILQ59_RS00150	COG2252	PERMEase
ILQ59_RS00155	COG0431	NADPH-dependent FMN reductase
ILQ59_RS00160	COG2091	lysine biosynthetic process via aminoadipic acid
ILQ59_RS00175	COG0814	amino acid
ILQ59_RS00230	COG0592	DNA-directed DNA polymerase activity
ILQ59_RS00240	COG0187	DNA topoisomerase II activity
ILQ59_RS00245	COG3753	Protein conserved in bacteria
ILQ59_RS00250	COG0561	phosphatase activity
ILQ59_RS00260	COG0644	oxidoreductase
ILQ59_RS00265	COG0823	Involved in the tonB-independent uptake of proteins
ILQ59_RS00270	COG5645	(Lipo)protein
ILQ59_RS00290	COG2188	Transcriptional regulator
ILQ59_RS00305	COG2207	Transcriptional regulator
ILQ59_RS00310	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ILQ59_RS00315	COG3119	arylsulfatase activity
ILQ59_RS00325	COG2149	membrane
ILQ59_RS00335	COG0641	radical SAM
ILQ59_RS00340	COG2814	Major facilitator Superfamily
ILQ59_RS00355	COG0028	Belongs to the TPP enzyme family
ILQ59_RS00360	COG0440	acetolactate synthase activity
ILQ59_RS00380	COG2197	response regulator
ILQ59_RS00385	COG3851	Histidine kinase
ILQ59_RS00390	COG2271	Major facilitator Superfamily
ILQ59_RS00395	COG2271	Major facilitator Superfamily
ILQ59_RS00425	COG2814	Major facilitator Superfamily
ILQ59_RS00435	COG1464	Belongs to the NlpA lipoprotein family
ILQ59_RS00440	COG0697	spore germination
ILQ59_RS00445	COG2814	Major facilitator Superfamily
ILQ59_RS00670	COG4372	Transposase
ILQ59_RS00675	COG3436	PFAM IS66 Orf2 family protein
ILQ59_RS00740	COG0582	viral genome integration into host DNA
ILQ59_RS00750	COG2211	Major facilitator Superfamily
ILQ59_RS00755	COG1501	Belongs to the glycosyl hydrolase 31 family
ILQ59_RS00760	COG2982	Protein involved in outer membrane biogenesis
ILQ59_RS00765	COG2233	PERMEase
ILQ59_RS00770	COG0786	glutamate:sodium symporter activity
ILQ59_RS00780	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ILQ59_RS00785	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ILQ59_RS00790	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ILQ59_RS00800	COG0194	GDP metabolic process
ILQ59_RS00810	COG2860	membrane
ILQ59_RS00830	COG1561	YicC-like family, N-terminal region
ILQ59_RS00855	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ILQ59_RS00885	COG1519	Transferase
ILQ59_RS00890	COG0859	PFAM glycosyl transferase family 9
ILQ59_RS00895	COG0438	transferase activity, transferring glycosyl groups
ILQ59_RS00900	COG0515	serine threonine protein kinase
ILQ59_RS00910	COG3642	lipopolysaccharide core region biosynthetic process
ILQ59_RS00930	COG0859	PFAM glycosyl transferase family 9
ILQ59_RS00935	COG0859	PFAM glycosyl transferase family 9
ILQ59_RS00950	COG0156	8-amino-7-oxononanoate synthase activity
ILQ59_RS00960	COG1216	Glycosyl transferase, family 2
ILQ59_RS00965	COG2861	carbohydrate metabolic process
ILQ59_RS00970	COG4942	peptidase
ILQ59_RS00980	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ILQ59_RS00985	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
ILQ59_RS01000	COG1045	serine acetyltransferase
ILQ59_RS01005	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
ILQ59_RS01015	COG2186	Transcriptional regulator
ILQ59_RS01020	COG1620	l-lactate permease
ILQ59_RS01025	COG5295	Hep Hag repeat protein
ILQ59_RS01045	COG3722	fumarate hydratase activity
ILQ59_RS01055	COG2213	PTS system mannitol-specific
ILQ59_RS01055	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ59_RS01065	COG1566	PFAM secretion protein HlyD family protein
ILQ59_RS01075	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
ILQ59_RS01080	COG3209	COG3209 Rhs family protein
ILQ59_RS01085	COG0625	glutathione transferase activity
ILQ59_RS01095	COG3276	selenocysteine insertion sequence binding
ILQ59_RS01100	COG1454	alcohol dehydrogenase
ILQ59_RS01110	COG1012	belongs to the aldehyde dehydrogenase family
ILQ59_RS01120	COG1566	PFAM secretion protein HlyD family protein
ILQ59_RS01125	COG0583	DNA-binding transcription factor activity
ILQ59_RS01130	COG3713	MltA-interacting MipA family protein
ILQ59_RS01140	COG2211	Major facilitator Superfamily
ILQ59_RS01155	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
ILQ59_RS01160	COG3977	Valine--pyruvate aminotransferase
ILQ59_RS01165	COG0366	Alpha amylase catalytic
ILQ59_RS01170	COG2992	FlgJ-related protein
ILQ59_RS01175	COG1609	Transcriptional regulator
ILQ59_RS01175	COG2207	Transcriptional regulator
ILQ59_RS01180	COG4214	carbohydrate transport
ILQ59_RS01190	COG4213	ABC transporter substrate-binding protein
ILQ59_RS01200	COG1070	Carbohydrate kinase
ILQ59_RS01205	COG4682	membrane
ILQ59_RS01210	COG4682	membrane
ILQ59_RS01215	COG3274	enterobacterial common antigen metabolic process
ILQ59_RS01240	COG1278	Cold shock
ILQ59_RS01245	COG2944	sequence-specific DNA binding
ILQ59_RS01260	COG2885	chlorophyll binding
ILQ59_RS01265	COG0243	molybdopterin cofactor binding
ILQ59_RS01270	COG0456	acetyltransferase
ILQ59_RS01275	COG2818	Glycosylase
ILQ59_RS01280	COG5571	outer membrane autotransporter
ILQ59_RS01285	COG2223	nitrite transmembrane transporter activity
ILQ59_RS01290	COG3539	Fimbrial protein
ILQ59_RS01295	COG3121	Chaperone
ILQ59_RS01305	COG3539	Fimbrial protein
ILQ59_RS01310	COG3539	Fimbrial protein
ILQ59_RS01315	COG2194	sulfuric ester hydrolase activity
ILQ59_RS01325	COG0747	negative chemotaxis
ILQ59_RS01330	COG0601	transmembrane transport
ILQ59_RS01335	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ILQ59_RS01340	COG0444	Belongs to the ABC transporter superfamily
ILQ59_RS01345	COG4608	Belongs to the ABC transporter superfamily
ILQ59_RS01350	COG0814	amino acid
ILQ59_RS01360	COG2194	sulfuric ester hydrolase activity
ILQ59_RS01390	COG1215	transferase activity, transferring glycosyl groups
ILQ59_RS01395	COG1215	transferase activity, transferring glycosyl groups
ILQ59_RS01400	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
ILQ59_RS01405	COG3118	belongs to the thioredoxin family
ILQ59_RS01405	COG0457	Tetratricopeptide repeat
ILQ59_RS01410	COG2200	EAL domain
ILQ59_RS01410	COG2199	diguanylate cyclase activity
ILQ59_RS01420	COG0612	Peptidase, M16
ILQ59_RS01430	COG2200	EAL domain
ILQ59_RS01435	COG2982	Protein involved in outer membrane biogenesis
ILQ59_RS01440	COG0477	Major facilitator Superfamily
ILQ59_RS01445	COG1295	ribonuclease BN
ILQ59_RS01450	COG0583	DNA-binding transcription factor activity
ILQ59_RS01455	COG2197	response regulator
ILQ59_RS01465	COG1858	cytochrome C peroxidase
ILQ59_RS01470	COG0076	glutamate decarboxylase activity
ILQ59_RS01475	COG2207	Transcriptional regulator
ILQ59_RS01480	COG2207	Transcriptional regulator
ILQ59_RS01485	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ILQ59_RS01490	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ILQ59_RS01500	COG2771	luxR family
ILQ59_RS01505	COG3247	response to pH
ILQ59_RS01520	COG1285	pathogenesis
ILQ59_RS01525	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
ILQ59_RS01530	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ILQ59_RS01540	COG3721	Heme iron utilization protein
ILQ59_RS01550	COG4558	Periplasmic binding protein
ILQ59_RS01555	COG4771	TonB-dependent receptor
ILQ59_RS01560	COG3720	iron ion transport
ILQ59_RS01565	COG2197	response regulator
ILQ59_RS01570	COG3065	identical protein binding
ILQ59_RS01580	COG1393	Belongs to the ArsC family
ILQ59_RS01585	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
ILQ59_RS01590	COG0640	Transcriptional regulator
ILQ59_RS01600	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ILQ59_RS01605	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
ILQ59_RS01610	COG0339	signal peptide processing
ILQ59_RS01620	COG3104	oligopeptide transport
ILQ59_RS01625	COG0589	response to stress
ILQ59_RS01635	COG0306	phosphate transporter
ILQ59_RS01640	COG2081	HI0933 family
ILQ59_RS01660	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ILQ59_RS01665	COG0842	Transport permease protein
ILQ59_RS01665	COG1129	ABC transporter
ILQ59_RS01670	COG0842	Transport permease protein
ILQ59_RS01685	COG0191	fructose-bisphosphate aldolase activity
ILQ59_RS01700	COG3775	system Galactitol-specific IIC component
ILQ59_RS01705	COG3414	Phosphotransferase system galactitol-specific IIB component
ILQ59_RS01715	COG2188	Transcriptional regulator
ILQ59_RS01725	COG1124	(ABC) transporter
ILQ59_RS01730	COG0444	Belongs to the ABC transporter superfamily
ILQ59_RS01735	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ILQ59_RS01740	COG0601	transmembrane transport
ILQ59_RS01745	COG0747	negative chemotaxis
ILQ59_RS01750	COG2091	lysine biosynthetic process via aminoadipic acid
ILQ59_RS01755	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ILQ59_RS01760	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ59_RS01770	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ILQ59_RS01795	COG1216	Glycosyl transferase, family 2
ILQ59_RS01815	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ILQ59_RS01825	COG0204	Acyl-transferase
ILQ59_RS01845	COG0628	permease
ILQ59_RS01860	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
ILQ59_RS01875	COG3714	YhhN family
ILQ59_RS01885	COG3776	membrane
ILQ59_RS01890	COG0742	ribosomal rna small subunit methyltransferase
ILQ59_RS01895	COG0552	protein localization to endoplasmic reticulum
ILQ59_RS01900	COG2884	Cell division ATP-binding protein ftsE
ILQ59_RS01905	COG2177	Part of the ABC transporter FtsEX involved in
ILQ59_RS01910	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ILQ59_RS01915	COG0683	leucine binding
ILQ59_RS01930	COG0456	acetyltransferase
ILQ59_RS01935	COG0683	leucine binding
ILQ59_RS01940	COG0559	Belongs to the binding-protein-dependent transport system permease family
ILQ59_RS01945	COG4177	L-phenylalanine transmembrane transporter activity
ILQ59_RS01950	COG0411	ABC transporter
ILQ59_RS01955	COG0410	ABC transporter
ILQ59_RS01965	COG1653	transport
ILQ59_RS01970	COG1175	transmembrane transport
ILQ59_RS01980	COG3842	ATPase activity
ILQ59_RS01985	COG0584	glycerophosphoryl diester phosphodiesterase
ILQ59_RS01995	COG0405	Gamma-glutamyltransferase
ILQ59_RS02005	COG1247	-acetyltransferase
ILQ59_RS02010	COG0673	inositol 2-dehydrogenase activity
ILQ59_RS02015	COG1741	Belongs to the pirin family
ILQ59_RS02020	COG1609	Transcriptional regulator
ILQ59_RS02025	COG3265	gluconokinase activity
ILQ59_RS02030	COG2610	gluconate transmembrane transporter activity
ILQ59_RS02035	COG0514	ATP-dependent DNA helicase (RecQ)
ILQ59_RS02055	COG2095	MarC family integral membrane protein
ILQ59_RS02060	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
ILQ59_RS02065	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
ILQ59_RS02085	COG0058	SHG alpha-glucan phosphorylase activity
ILQ59_RS02090	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ILQ59_RS02105	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
ILQ59_RS02120	COG1349	DNA-binding transcription factor activity
ILQ59_RS02125	COG4650	regulator
ILQ59_RS02130	COG1690	Belongs to the RtcB family
ILQ59_RS02155	COG0058	SHG alpha-glucan phosphorylase activity
ILQ59_RS02160	COG1640	4-alpha-glucanotransferase
ILQ59_RS02165	COG2610	gluconate transmembrane transporter activity
ILQ59_RS02175	COG1040	competence protein
ILQ59_RS02185	COG5464	transposase or invertase
ILQ59_RS02195	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
ILQ59_RS02200	COG1918	ferrous iron import across plasma membrane
ILQ59_RS02205	COG2183	response to ionizing radiation
ILQ59_RS02210	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ILQ59_RS02230	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
ILQ59_RS02240	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
ILQ59_RS02245	COG1011	Hydrolase
ILQ59_RS02255	COG0494	nUDIX hydrolase
ILQ59_RS02260	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
ILQ59_RS02265	COG4972	Pilus assembly protein
ILQ59_RS02270	COG3166	PFAM Fimbrial assembly family protein
ILQ59_RS02285	COG4796	Type ii and iii secretion system protein
ILQ59_RS02300	COG3266	domain, Protein
ILQ59_RS02305	COG0338	D12 class N6 adenine-specific DNA methyltransferase
ILQ59_RS02310	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ILQ59_RS02315	COG0546	phosphoglycolate phosphatase activity
ILQ59_RS02320	COG0180	Tryptophanyl-tRNA synthetase
ILQ59_RS02325	COG2188	Transcriptional regulator
ILQ59_RS02335	COG1082	Xylose isomerase domain protein TIM barrel
ILQ59_RS02340	COG2222	sugar isomerase
ILQ59_RS02345	COG0531	amino acid
ILQ59_RS02360	COG2116	formate transmembrane transporter activity
ILQ59_RS02365	COG2146	nitrite reductase [NAD(P)H] activity
ILQ59_RS02370	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ILQ59_RS02380	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ILQ59_RS02390	COG2184	nucleotidyltransferase activity
ILQ59_RS02395	COG0512	Glutamine amidotransferase of anthranilate synthase
ILQ59_RS02400	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ILQ59_RS02405	COG1289	transmembrane transporter activity
ILQ59_RS02410	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ILQ59_RS02415	COG1765	OsmC-like protein
ILQ59_RS02420	COG3954	Phosphoribulokinase
ILQ59_RS02430	COG0429	hydrolase of the alpha beta-hydrolase fold
ILQ59_RS02435	COG0488	(ABC) transporter
ILQ59_RS02450	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
ILQ59_RS02455	COG1047	Peptidyl-prolyl cis-trans
ILQ59_RS02465	COG0545	Peptidyl-prolyl cis-trans isomerase
ILQ59_RS02470	COG2964	Protein conserved in bacteria
ILQ59_RS02540	COG0089	rRNA binding
ILQ59_RS02630	COG0201	protein transport
ILQ59_RS02670	COG0789	Transcriptional regulator
ILQ59_RS02675	COG3036	rescue of stalled ribosome
ILQ59_RS02685	COG0569	domain protein
ILQ59_RS02705	COG0758	DNA mediated transformation
ILQ59_RS02715	COG0551	DNA topoisomerase type I activity
ILQ59_RS02720	COG0009	L-threonylcarbamoyladenylate synthase
ILQ59_RS02735	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ILQ59_RS02775	COG1126	abc transporter atp-binding protein
ILQ59_RS02780	COG0765	amino acid transport
ILQ59_RS02785	COG4597	amino acid ABC transporter
ILQ59_RS02790	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ILQ59_RS02805	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ILQ59_RS02810	COG1309	transcriptional regulator
ILQ59_RS02820	COG2189	Belongs to the N(4) N(6)-methyltransferase family
ILQ59_RS02830	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ILQ59_RS02840	COG4145	pantothenate transmembrane transporter activity
ILQ59_RS02845	COG3924	membrane
ILQ59_RS02850	COG0439	Biotin carboxylase
ILQ59_RS02855	COG0511	ligase activity, forming carbon-carbon bonds
ILQ59_RS02860	COG0604	alcohol dehydrogenase
ILQ59_RS02865	COG2200	EAL domain
ILQ59_RS02865	COG2199	diguanylate cyclase activity
ILQ59_RS02870	COG1077	Cell shape determining protein MreB Mrl
ILQ59_RS02875	COG1792	Involved in formation and maintenance of cell shape
ILQ59_RS02880	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
ILQ59_RS02885	COG0424	maF-like protein
ILQ59_RS02890	COG1530	ribonuclease E activity
ILQ59_RS02895	COG3164	Protein of unknown function
ILQ59_RS02900	COG0312	modulator of DNA gyrase
ILQ59_RS02905	COG0583	DNA-binding transcription factor activity
ILQ59_RS02925	COG2732	(Barnase) inhibitor
ILQ59_RS02945	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ILQ59_RS02950	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ILQ59_RS02955	COG3105	Protein conserved in bacteria
ILQ59_RS02960	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
ILQ59_RS02975	COG0625	glutathione transferase activity
ILQ59_RS02980	COG2969	positive regulation of protein catabolic process
ILQ59_RS02985	COG3069	C4-dicarboxylate transmembrane transporter activity
ILQ59_RS03015	COG2731	YhcH YjgK YiaL family protein
ILQ59_RS03020	COG4804	nuclease activity
ILQ59_RS03025	COG0493	'glutamate synthase
ILQ59_RS03030	COG0070	glutamate synthase
ILQ59_RS03030	COG0069	glutamate synthase activity
ILQ59_RS03030	COG0067	glutamate synthase
ILQ59_RS03035	COG1242	4 iron, 4 sulfur cluster binding
ILQ59_RS03040	COG0784	Response regulator, receiver
ILQ59_RS03040	COG2198	Histidine kinase
ILQ59_RS03040	COG5002	protein histidine kinase activity
ILQ59_RS03045	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
ILQ59_RS03055	COG0515	serine threonine protein kinase
ILQ59_RS03060	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ59_RS03075	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
ILQ59_RS03080	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
ILQ59_RS03085	COG1137	ATPase activity
ILQ59_RS03090	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
ILQ59_RS03095	COG3117	lipopolysaccharide transmembrane transporter activity
ILQ59_RS03100	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
ILQ59_RS03105	COG0517	IMP dehydrogenase activity
ILQ59_RS03105	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
ILQ59_RS03110	COG0530	calcium, potassium:sodium antiporter activity
ILQ59_RS03115	COG1127	ABC transporter
ILQ59_RS03120	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ILQ59_RS03125	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ILQ59_RS03130	COG2854	intermembrane phospholipid transfer
ILQ59_RS03135	COG3113	response to antibiotic
ILQ59_RS03140	COG5007	Belongs to the BolA IbaG family
ILQ59_RS03150	COG3423	Transcriptional regulator
ILQ59_RS03155	COG0142	geranyltranstransferase activity
ILQ59_RS03170	COG0697	spore germination
ILQ59_RS03180	COG2027	D-alanyl-D-alanine carboxypeptidase
ILQ59_RS03185	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ILQ59_RS03190	COG1534	Rna-binding protein
ILQ59_RS03200	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ILQ59_RS03205	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ILQ59_RS03215	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ILQ59_RS03225	COG2194	sulfuric ester hydrolase activity
ILQ59_RS03245	COG0195	Participates in both transcription termination and antitermination
ILQ59_RS03285	COG0513	Belongs to the DEAD box helicase family
ILQ59_RS03290	COG0814	amino acid
ILQ59_RS03295	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ILQ59_RS03300	COG0826	peptidase U32
ILQ59_RS03305	COG0826	peptidase U32
ILQ59_RS03310	COG3154	lipid carrier protein
ILQ59_RS03315	COG3153	acetyltransferase
ILQ59_RS03325	COG3787	Belongs to the UPF0306 family
ILQ59_RS03330	COG0693	protein deglycase activity
ILQ59_RS03335	COG0702	epimerase
ILQ59_RS03340	COG0701	Predicted permease
ILQ59_RS03345	COG2823	Periplasmic or secreted lipoprotein
ILQ59_RS03365	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
ILQ59_RS03385	COG3188	usher protein
ILQ59_RS03390	COG3121	Chaperone
ILQ59_RS03395	COG3539	Fimbrial protein
ILQ59_RS03405	COG3716	PTS system mannose fructose sorbose family IID component
ILQ59_RS03415	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ILQ59_RS03425	COG2222	sugar isomerase
ILQ59_RS03430	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
ILQ59_RS03435	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ59_RS03440	COG3716	PTS system mannose fructose sorbose family IID component
ILQ59_RS03450	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ILQ59_RS03460	COG1349	DNA-binding transcription factor activity
ILQ59_RS03470	COG2002	toxin-antitoxin pair type II binding
ILQ59_RS03475	COG2721	sulfolactate sulfo-lyase activity
ILQ59_RS03480	COG2271	Major facilitator Superfamily
ILQ59_RS03490	COG2084	Dehydrogenase
ILQ59_RS03495	COG1929	Belongs to the glycerate kinase type-1 family
ILQ59_RS03520	COG0583	DNA-binding transcription factor activity
ILQ59_RS03525	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ILQ59_RS03535	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ILQ59_RS03540	COG1882	Formate acetyltransferase
ILQ59_RS03545	COG0251	oxidation-reduction process
ILQ59_RS03550	COG1760	l-serine dehydratase
ILQ59_RS03555	COG0814	amino acid
ILQ59_RS03570	COG1741	Belongs to the pirin family
ILQ59_RS03575	COG0583	DNA-binding transcription factor activity
ILQ59_RS03580	COG3152	Membrane
ILQ59_RS03585	COG3152	Membrane
ILQ59_RS03590	COG0435	Glutathione S-transferase
ILQ59_RS03595	COG2259	Doxx family
ILQ59_RS03605	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
ILQ59_RS03610	COG4575	ribosome binding
ILQ59_RS03615	COG1422	Protein of unknown function (DUF1090)
ILQ59_RS03625	COG0586	Pfam SNARE associated Golgi protein
ILQ59_RS03630	COG2186	Transcriptional regulator
ILQ59_RS03635	COG2271	Major facilitator Superfamily
ILQ59_RS03645	COG2721	sulfolactate sulfo-lyase activity
ILQ59_RS03655	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
ILQ59_RS03660	COG0861	Integral membrane protein TerC family
ILQ59_RS03665	COG0673	inositol 2-dehydrogenase activity
ILQ59_RS03670	COG2949	membrane
ILQ59_RS03675	COG1451	nucleotide metabolic process
ILQ59_RS03685	COG4680	protein conserved in bacteria
ILQ59_RS03690	COG5499	transcription regulator containing HTH domain
ILQ59_RS03695	COG0446	pyridine nucleotide-disulphide oxidoreductase
ILQ59_RS03695	COG1902	pentaerythritol trinitrate reductase activity
ILQ59_RS03700	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
ILQ59_RS03700	COG3408	Glycogen debranching enzyme
ILQ59_RS03710	COG0531	amino acid
ILQ59_RS03715	COG2731	YhcH YjgK YiaL family protein
ILQ59_RS03720	COG3250	beta-galactosidase activity
ILQ59_RS03725	COG1609	Transcriptional regulator
ILQ59_RS03730	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ILQ59_RS03740	COG0840	transmembrane signaling receptor activity
ILQ59_RS03745	COG1695	Transcriptional regulator
ILQ59_RS03750	COG2375	cellular response to nickel ion
ILQ59_RS03765	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ILQ59_RS03770	COG0358	DNA primase activity
ILQ59_RS03775	COG0828	Belongs to the bacterial ribosomal protein bS21 family
ILQ59_RS03785	COG0471	metal ion transport
ILQ59_RS03790	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
ILQ59_RS03795	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
ILQ59_RS03800	COG0583	DNA-binding transcription factor activity
ILQ59_RS03810	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
ILQ59_RS03825	COG4991	sh3 domain protein
ILQ59_RS03830	COG3025	triphosphatase activity
ILQ59_RS03855	COG2268	Band 7 protein
ILQ59_RS03860	COG1585	Membrane protein implicated in regulation of membrane protease activity
ILQ59_RS03890	COG3384	dioxygenase
ILQ59_RS03895	COG0754	glutathionylspermidine amidase activity
ILQ59_RS03905	COG1538	Outer membrane efflux protein
ILQ59_RS03910	COG0494	nUDIX hydrolase
ILQ59_RS03915	COG3151	Protein conserved in bacteria
ILQ59_RS03920	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ILQ59_RS03925	COG3150	esterase
ILQ59_RS03930	COG0187	DNA topoisomerase II activity
ILQ59_RS03935	COG4774	siderophore transport
ILQ59_RS03940	COG1120	ATPase activity
ILQ59_RS03950	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ILQ59_RS03960	COG1737	Transcriptional regulator
ILQ59_RS03965	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
ILQ59_RS03970	COG2249	NAD(P)H dehydrogenase (quinone) activity
ILQ59_RS03975	COG0642	Histidine kinase
ILQ59_RS03980	COG0745	RESPONSE REGULATOR receiver
ILQ59_RS03985	COG3111	PFAM Bacterial OB fold (BOF) protein
ILQ59_RS03990	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
ILQ59_RS03995	COG4166	transmembrane transport
ILQ59_RS04000	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
ILQ59_RS04005	COG0204	Acyl-transferase
ILQ59_RS04010	COG2132	Multicopper oxidase
ILQ59_RS04015	COG1032	radical SAM domain protein
ILQ59_RS04020	COG4238	major outer membrane lipoprotein
ILQ59_RS04030	COG0656	L-ascorbic acid biosynthetic process
ILQ59_RS04035	COG1979	alcohol dehydrogenase
ILQ59_RS04040	COG2207	Transcriptional regulator
ILQ59_RS04045	COG0586	Pfam SNARE associated Golgi protein
ILQ59_RS04050	COG0626	cystathionine gamma-synthase activity
ILQ59_RS04055	COG0811	peptide transport
ILQ59_RS04060	COG0848	biopolymer transport protein
ILQ59_RS04065	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ59_RS04075	COG0667	Aldo Keto reductase
ILQ59_RS04090	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
ILQ59_RS04095	COG0437	4 iron, 4 sulfur cluster binding
ILQ59_RS04100	COG5557	Pfam Polysulphide reductase, NrfD
ILQ59_RS04105	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
ILQ59_RS04110	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
ILQ59_RS04115	COG1773	rubredoxin
ILQ59_RS04120	COG0375	protein maturation
ILQ59_RS04125	COG0298	carbon dioxide binding
ILQ59_RS04130	COG0625	glutathione transferase activity
ILQ59_RS04135	COG0754	glutathionylspermidine amidase activity
ILQ59_RS04160	COG3436	PFAM IS66 Orf2 family protein
ILQ59_RS04165	COG4372	Transposase
ILQ59_RS04170	COG3436	PFAM IS66 Orf2 family protein
ILQ59_RS04240	COG3436	PFAM IS66 Orf2 family protein
ILQ59_RS04255	COG0582	viral genome integration into host DNA
ILQ59_RS04265	COG1811	Na channel or pump
ILQ59_RS04270	COG1982	Orn Lys Arg decarboxylase major
ILQ59_RS04275	COG2211	Major facilitator Superfamily
ILQ59_RS04290	COG1194	a g-specific adenine glycosylase
ILQ59_RS04300	COG3171	Protein conserved in bacteria
ILQ59_RS04310	COG0252	asparaginase activity
ILQ59_RS04320	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ILQ59_RS04325	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
ILQ59_RS04335	COG0762	integral membrane protein
ILQ59_RS04340	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
ILQ59_RS04345	COG2805	Type II/IV secretion system protein
ILQ59_RS04360	COG0189	ligase activity
ILQ59_RS04365	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ILQ59_RS04370	COG2356	endonuclease I
ILQ59_RS04375	COG3091	SprT-like family
ILQ59_RS04380	COG2814	Major facilitator Superfamily
ILQ59_RS04400	COG1166	arginine decarboxylase activity
ILQ59_RS04415	COG0501	Belongs to the peptidase M48B family
ILQ59_RS04420	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ILQ59_RS04425	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ59_RS04430	COG2213	PTS system mannitol-specific
ILQ59_RS04435	COG1063	alcohol dehydrogenase
ILQ59_RS04440	COG1494	fructose-1,6-bisphosphatase
ILQ59_RS04450	COG1072	(Pantothenic acid kinase))
ILQ59_RS04455	COG1122	ATPase activity
ILQ59_RS04460	COG1122	ATPase activity
ILQ59_RS04485	COG0126	phosphoglycerate kinase activity
ILQ59_RS04490	COG0191	fructose-bisphosphate aldolase activity
ILQ59_RS04495	COG0668	transmembrane transport
ILQ59_RS04505	COG2968	Membrane
ILQ59_RS04515	COG0427	acetyl-CoA hydrolase
ILQ59_RS04520	COG1024	Enoyl-CoA hydratase
ILQ59_RS04525	COG1703	isobutyryl-CoA mutase activity
ILQ59_RS04530	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
ILQ59_RS04530	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
ILQ59_RS04545	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ILQ59_RS04560	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
ILQ59_RS04580	COG0006	proline dipeptidase activity
ILQ59_RS04585	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ILQ59_RS04590	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ILQ59_RS04615	COG2723	6-phospho-beta-galactosidase activity
ILQ59_RS04625	COG1272	protein, Hemolysin III
ILQ59_RS04635	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
ILQ59_RS04645	COG0716	FMN binding
ILQ59_RS04650	COG4974	Belongs to the 'phage' integrase family
ILQ59_RS04655	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ILQ59_RS04660	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ILQ59_RS04670	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
ILQ59_RS04690	COG2233	PERMEase
ILQ59_RS04715	COG2252	PERMEase
ILQ59_RS04720	COG0402	S-adenosylhomocysteine deaminase activity
ILQ59_RS04725	COG2233	PERMEase
ILQ59_RS04730	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ILQ59_RS04730	COG2080	2 iron, 2 sulfur cluster binding
ILQ59_RS04735	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
ILQ59_RS04740	COG0402	S-adenosylhomocysteine deaminase activity
ILQ59_RS04745	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ILQ59_RS04745	COG0493	'glutamate synthase
ILQ59_RS04750	COG2068	MobA-Related Protein
ILQ59_RS04755	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ILQ59_RS04760	COG3608	succinylglutamate desuccinylase aspartoacylase
ILQ59_RS04760	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
ILQ59_RS04765	COG0549	Belongs to the carbamate kinase family
ILQ59_RS04775	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ILQ59_RS04780	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ILQ59_RS04785	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
ILQ59_RS04790	COG3829	transcription factor binding
ILQ59_RS04795	COG2080	2 iron, 2 sulfur cluster binding
ILQ59_RS04800	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
ILQ59_RS04805	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ILQ59_RS04810	COG4942	peptidase
ILQ59_RS04830	COG2207	Transcriptional regulator
ILQ59_RS04935	COG2197	response regulator
ILQ59_RS04940	COG0741	lytic transglycosylase activity
ILQ59_RS04950	COG0457	Tetratricopeptide repeat
ILQ59_RS04950	COG3710	Transcriptional regulator
ILQ59_RS04955	COG0457	Tetratricopeptide repeat
ILQ59_RS04980	COG3710	Transcriptional regulator
ILQ59_RS04985	COG2771	luxR family
ILQ59_RS04990	COG0814	amino acid
ILQ59_RS04995	COG0183	Belongs to the thiolase family
ILQ59_RS05005	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ59_RS05010	COG2814	Major facilitator Superfamily
ILQ59_RS05015	COG1794	racemase activity, acting on amino acids and derivatives
ILQ59_RS05020	COG0583	DNA-binding transcription factor activity
ILQ59_RS05030	COG1609	Transcriptional regulator
ILQ59_RS05045	COG0667	Aldo Keto reductase
ILQ59_RS05055	COG0861	Integral membrane protein TerC family
ILQ59_RS05070	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
ILQ59_RS05085	COG2165	general secretion pathway protein
ILQ59_RS05090	COG4795	General secretion pathway protein
ILQ59_RS05100	COG4967	type IV pilus modification protein PilV
ILQ59_RS05105	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
ILQ59_RS05110	COG1025	Belongs to the peptidase M16 family
ILQ59_RS05115	COG1074	ATP-dependent DNA helicase activity
ILQ59_RS05120	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ILQ59_RS05125	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
ILQ59_RS05125	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
ILQ59_RS05130	COG0860	N-Acetylmuramoyl-L-alanine amidase
ILQ59_RS05150	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
ILQ59_RS05155	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ILQ59_RS05160	COG2166	iron-sulfur cluster assembly
ILQ59_RS05165	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ILQ59_RS05175	COG0583	DNA-binding transcription factor activity
ILQ59_RS05180	COG2363	Small membrane protein
ILQ59_RS05190	COG1349	DNA-binding transcription factor activity
ILQ59_RS05200	COG1070	Carbohydrate kinase
ILQ59_RS05210	COG0738	Major facilitator superfamily
ILQ59_RS05215	COG0235	Class ii aldolase
ILQ59_RS05220	COG1454	alcohol dehydrogenase
ILQ59_RS05230	COG1760	l-serine dehydratase
ILQ59_RS05235	COG0814	amino acid
ILQ59_RS05240	COG1611	Belongs to the LOG family
ILQ59_RS05255	COG3098	single-species biofilm formation
ILQ59_RS05260	COG0564	pseudouridine synthase activity
ILQ59_RS05265	COG0716	FMN binding
ILQ59_RS05270	COG2271	Major facilitator Superfamily
ILQ59_RS05280	COG4948	Mandelate Racemase Muconate Lactonizing
ILQ59_RS05285	COG3437	response regulator, receiver
ILQ59_RS05285	COG2205	protein histidine kinase activity
ILQ59_RS05285	COG3850	Histidine kinase
ILQ59_RS05285	COG4999	Histidine kinase
ILQ59_RS05290	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ILQ59_RS05295	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ILQ59_RS05300	COG2336	PFAM SpoVT AbrB
ILQ59_RS05305	COG2337	Toxic component of a toxin-antitoxin (TA) module
ILQ59_RS05310	COG3956	TIGRFAM MazG family protein
ILQ59_RS05325	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
ILQ59_RS05335	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
ILQ59_RS05345	COG0602	queuosine metabolic process
ILQ59_RS05350	COG1070	Carbohydrate kinase
ILQ59_RS05355	COG2223	nitrite transmembrane transporter activity
ILQ59_RS05360	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ59_RS05365	COG0277	FAD linked oxidase domain protein
ILQ59_RS05375	COG2086	electron transfer activity
ILQ59_RS05385	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
ILQ59_RS05390	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
ILQ59_RS05395	COG0644	oxidoreductase
ILQ59_RS05400	COG0720	synthase
ILQ59_RS05405	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
ILQ59_RS05425	COG1203	CRISPR-associated helicase, Cas3
ILQ59_RS05440	COG1857	crispr-associated protein
ILQ59_RS05455	COG1518	maintenance of DNA repeat elements
ILQ59_RS05460	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ILQ59_RS05465	COG2234	aminopeptidase activity
ILQ59_RS05520	COG4942	peptidase
ILQ59_RS05520	COG1388	LysM domain
ILQ59_RS05525	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ILQ59_RS05530	COG1846	Transcriptional regulator
ILQ59_RS05535	COG0163	prenyltransferase activity
ILQ59_RS05540	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
ILQ59_RS05550	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
ILQ59_RS05570	COG3604	Transcriptional regulator
ILQ59_RS05575	COG0309	Hydrogenase expression formation protein (HypE)
ILQ59_RS05580	COG0409	Hydrogenase expression formation protein
ILQ59_RS05585	COG0298	carbon dioxide binding
ILQ59_RS05590	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
ILQ59_RS05595	COG0375	protein maturation
ILQ59_RS05605	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
ILQ59_RS05610	COG0651	ATP synthesis coupled electron transport
ILQ59_RS05615	COG0650	Formate hydrogenlyase subunit 4
ILQ59_RS05620	COG3261	NADH dehydrogenase
ILQ59_RS05620	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
ILQ59_RS05625	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ILQ59_RS05630	COG3260	NADH ubiquinone oxidoreductase 20
ILQ59_RS05640	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
ILQ59_RS05645	COG2723	6-phospho-beta-galactosidase activity
ILQ59_RS05650	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ILQ59_RS05650	COG1263	PTS System
ILQ59_RS05655	COG1609	Transcriptional regulator
ILQ59_RS05660	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
ILQ59_RS05665	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
ILQ59_RS05685	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
ILQ59_RS05685	COG0517	IMP dehydrogenase activity
ILQ59_RS05690	COG1349	DNA-binding transcription factor activity
ILQ59_RS05695	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ59_RS05700	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ59_RS05720	COG2951	lytic endotransglycosylase activity
ILQ59_RS05725	COG1546	Belongs to the CinA family
ILQ59_RS05740	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ILQ59_RS05745	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
ILQ59_RS05775	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ILQ59_RS05780	COG1238	metal cluster binding
ILQ59_RS05795	COG2814	Major facilitator Superfamily
ILQ59_RS05800	COG1566	PFAM secretion protein HlyD family protein
ILQ59_RS05805	COG1846	Transcriptional regulator
ILQ59_RS05815	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ILQ59_RS05820	COG2814	Major facilitator Superfamily
ILQ59_RS05825	COG2113	Glycine betaine
ILQ59_RS05830	COG4176	ABC-type proline glycine betaine transport system permease component
ILQ59_RS05835	COG4175	Glycine betaine
ILQ59_RS05840	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ILQ59_RS05845	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ILQ59_RS05855	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
ILQ59_RS05860	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ILQ59_RS05870	COG4575	ribosome binding
ILQ59_RS05885	COG2916	Histone family protein nucleoid-structuring protein H-NS
ILQ59_RS05890	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ILQ59_RS05895	COG0640	Transcriptional regulator
ILQ59_RS05900	COG0401	homolog of Blt101
ILQ59_RS05905	COG1652	LysM domain
ILQ59_RS05910	COG1802	Transcriptional regulator
ILQ59_RS05915	COG1113	amino acid transport
ILQ59_RS05920	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ILQ59_RS05925	COG1012	belongs to the aldehyde dehydrogenase family
ILQ59_RS05930	COG0579	oxidoreductase
ILQ59_RS05955	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
ILQ59_RS06080	COG3436	PFAM IS66 Orf2 family protein
ILQ59_RS06140	COG2867	negative regulation of translational initiation
ILQ59_RS06150	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ILQ59_RS06155	COG0497	DNA recombination
ILQ59_RS06170	COG4536	flavin adenine dinucleotide binding
ILQ59_RS06175	COG4137	Cytochrome C assembly protein
ILQ59_RS06180	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ILQ59_RS06205	COG2885	chlorophyll binding
ILQ59_RS06210	COG2199	diguanylate cyclase activity
ILQ59_RS06225	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ILQ59_RS06230	COG1605	Chorismate mutase
ILQ59_RS06230	COG0287	Prephenate dehydrogenase
ILQ59_RS06235	COG1605	Chorismate mutase
ILQ59_RS06235	COG0077	Prephenate dehydratase
ILQ59_RS06245	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
ILQ59_RS06250	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ILQ59_RS06255	COG0564	pseudouridine synthase activity
ILQ59_RS06265	COG0542	response to heat
ILQ59_RS06290	COG0477	Major facilitator Superfamily
ILQ59_RS06295	COG5544	Lipoprotein
ILQ59_RS06300	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ILQ59_RS06305	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ILQ59_RS06305	COG1042	CoA-binding domain protein
ILQ59_RS06305	COG0045	succinate-CoA ligase (ADP-forming) activity
ILQ59_RS06310	COG3148	PFAM DTW domain containing protein
ILQ59_RS06315	COG3118	belongs to the thioredoxin family
ILQ59_RS06320	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ILQ59_RS06335	COG1280	lysine exporter protein (LysE YggA)
ILQ59_RS06340	COG0583	DNA-binding transcription factor activity
ILQ59_RS06345	COG0513	Belongs to the DEAD box helicase family
ILQ59_RS06350	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
ILQ59_RS06355	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
ILQ59_RS06365	COG1595	DNA-templated transcription, initiation
ILQ59_RS06370	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
ILQ59_RS06375	COG3026	antisigma factor binding
ILQ59_RS06380	COG3086	response to oxidative stress
ILQ59_RS06390	COG0681	Belongs to the peptidase S26 family
ILQ59_RS06410	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
ILQ59_RS06425	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ILQ59_RS06430	COG1737	Transcriptional regulator
ILQ59_RS06435	COG0560	Phosphoserine phosphatase
ILQ59_RS06440	COG0590	tRNA wobble adenosine to inosine editing
ILQ59_RS06445	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
ILQ59_RS06450	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ILQ59_RS06450	COG0047	phosphoribosylformylglycinamidine synthase activity
ILQ59_RS06455	COG2205	protein histidine kinase activity
ILQ59_RS06460	COG3170	Tfp pilus assembly protein FimV
ILQ59_RS06465	COG2204	response regulator
ILQ59_RS06470	COG0347	Belongs to the P(II) protein family
ILQ59_RS06475	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ILQ59_RS06475	COG1017	nitric oxide dioxygenase activity
ILQ59_RS06485	COG1940	carbohydrate kinase activity
ILQ59_RS06490	COG0457	Tetratricopeptide repeat
ILQ59_RS06495	COG1879	ABC-type sugar transport system periplasmic component
ILQ59_RS06500	COG1129	ABC transporter
ILQ59_RS06505	COG1172	Belongs to the binding-protein-dependent transport system permease family
ILQ59_RS06515	COG2017	converts alpha-aldose to the beta-anomer
ILQ59_RS06520	COG2259	Doxx family
ILQ59_RS06545	COG4638	Rieske (2fe-2S)
ILQ59_RS06550	COG0583	DNA-binding transcription factor activity
ILQ59_RS06555	COG2814	Major facilitator Superfamily
ILQ59_RS06560	COG3711	transcriptional antiterminator
ILQ59_RS06565	COG1073	alpha beta
ILQ59_RS06570	COG0483	inositol monophosphate 1-phosphatase activity
ILQ59_RS06590	COG0822	iron-sulfur transferase activity
ILQ59_RS06610	COG0633	Ferredoxin
ILQ59_RS06615	COG2975	iron-sulfur cluster assembly
ILQ59_RS06630	COG2897	thiosulfate sulfurtransferase activity
ILQ59_RS06640	COG4953	penicillin-binding protein 1C
ILQ59_RS06645	COG0243	molybdopterin cofactor binding
ILQ59_RS06650	COG0437	4 iron, 4 sulfur cluster binding
ILQ59_RS06655	COG3302	dmso reductase anchor subunit
ILQ59_RS06690	COG2976	Protein conserved in bacteria
ILQ59_RS06705	COG1645	bacterial-type flagellum-dependent swarming motility
ILQ59_RS06715	COG0517	IMP dehydrogenase activity
ILQ59_RS06715	COG0516	GMP reductase activity
ILQ59_RS06730	COG3133	Outer membrane lipoprotein
ILQ59_RS06745	COG2200	EAL domain
ILQ59_RS06750	COG0248	Ppx GppA phosphatase
ILQ59_RS06755	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
ILQ59_RS06760	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
ILQ59_RS06775	COG2233	PERMEase
ILQ59_RS06785	COG1393	Belongs to the ArsC family
ILQ59_RS06790	COG4783	chaperone-mediated protein folding
ILQ59_RS06795	COG0628	permease
ILQ59_RS06800	COG2116	formate transmembrane transporter activity
ILQ59_RS06805	COG3604	Transcriptional regulator
ILQ59_RS06815	COG3260	NADH ubiquinone oxidoreductase 20
ILQ59_RS06820	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ILQ59_RS06825	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
ILQ59_RS06825	COG3261	NADH dehydrogenase
ILQ59_RS06830	COG0651	ATP synthesis coupled electron transport
ILQ59_RS06835	COG4237	Hydrogenase 4 membrane
ILQ59_RS06840	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ILQ59_RS06845	COG0650	Formate hydrogenlyase subunit 4
ILQ59_RS06855	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
ILQ59_RS06860	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ILQ59_RS06865	COG2716	regulation of RNA biosynthetic process
ILQ59_RS06875	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
ILQ59_RS06885	COG2321	neutral zinc metallopeptidase
ILQ59_RS06895	COG0400	carboxylic ester hydrolase activity
ILQ59_RS06910	COG1393	Belongs to the ArsC family
ILQ59_RS06920	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ILQ59_RS06925	COG3850	Histidine kinase
ILQ59_RS06930	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
ILQ59_RS06930	COG0493	'glutamate synthase
ILQ59_RS06940	COG5342	invasion associated locus B
ILQ59_RS06945	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ILQ59_RS06950	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ILQ59_RS06955	COG0280	phosphate acetyltransferase
ILQ59_RS06955	COG0281	malic enzyme
ILQ59_RS06960	COG4810	utilization protein
ILQ59_RS06965	COG4917	ethanolamine utilization protein
ILQ59_RS06970	COG4766	ethanolamine catabolic process
ILQ59_RS06975	COG4812	Cobalamin adenosyltransferase
ILQ59_RS06980	COG0280	phosphate acetyltransferase
ILQ59_RS06985	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
ILQ59_RS06990	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
ILQ59_RS06995	COG1012	belongs to the aldehyde dehydrogenase family
ILQ59_RS07000	COG4820	ethanolamine utilization protein (EutJ)
ILQ59_RS07005	COG1454	alcohol dehydrogenase
ILQ59_RS07010	COG3192	ethanolamine utilization protein
ILQ59_RS07015	COG4819	ethanolamine utilization protein
ILQ59_RS07020	COG4303	Ethanolamine ammonia lyase large subunit
ILQ59_RS07030	COG4816	utilization protein
ILQ59_RS07035	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
ILQ59_RS07040	COG2207	Transcriptional regulator
ILQ59_RS07050	COG0860	N-Acetylmuramoyl-L-alanine amidase
ILQ59_RS07070	COG2837	iron assimilation
ILQ59_RS07075	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ILQ59_RS07080	COG1263	PTS System
ILQ59_RS07080	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ILQ59_RS07095	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ59_RS07100	COG4150	thiosulfate binding
ILQ59_RS07105	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
ILQ59_RS07110	COG4208	sulfate ABC transporter
ILQ59_RS07115	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
ILQ59_RS07120	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ILQ59_RS07135	COG2190	(PTS) system
ILQ59_RS07140	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ILQ59_RS07145	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ59_RS07150	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ILQ59_RS07170	COG3530	Putative quorum-sensing-regulated virulence factor
ILQ59_RS07175	COG0385	Bile acid
ILQ59_RS07180	COG0583	DNA-binding transcription factor activity
ILQ59_RS07225	COG4372	Transposase
ILQ59_RS07230	COG3436	PFAM IS66 Orf2 family protein
ILQ59_RS07245	COG3415	Transposase
ILQ59_RS07250	COG3415	Transposase
ILQ59_RS07265	COG2199	diguanylate cyclase activity
ILQ59_RS07265	COG2200	EAL domain
ILQ59_RS07270	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
ILQ59_RS07295	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ILQ59_RS07300	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ILQ59_RS07305	COG0006	proline dipeptidase activity
ILQ59_RS07310	COG1363	Peptidase, m42
ILQ59_RS07315	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ59_RS07315	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ILQ59_RS07315	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ59_RS07320	COG2207	Transcriptional regulator
ILQ59_RS07325	COG3279	Response regulator of the LytR AlgR family
ILQ59_RS07330	COG3275	phosphorelay sensor kinase activity
ILQ59_RS07335	COG0436	Aminotransferase
ILQ59_RS07345	COG1560	Kdo2-lipid A biosynthetic process
ILQ59_RS07370	COG0028	Belongs to the TPP enzyme family
ILQ59_RS07375	COG0679	Auxin Efflux Carrier
ILQ59_RS07385	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ILQ59_RS07385	COG0784	Response regulator, receiver
ILQ59_RS07385	COG2198	Histidine kinase
ILQ59_RS07385	COG2205	protein histidine kinase activity
ILQ59_RS07390	COG2197	response regulator
ILQ59_RS07395	COG1566	PFAM secretion protein HlyD family protein
ILQ59_RS07400	COG0477	Major facilitator Superfamily
ILQ59_RS07475	COG0582	viral genome integration into host DNA
ILQ59_RS07620	COG2815	serine threonine protein kinase
ILQ59_RS07620	COG0515	serine threonine protein kinase
ILQ59_RS07760	COG3772	lysozyme
ILQ59_RS07915	COG2116	formate transmembrane transporter activity
ILQ59_RS07920	COG2853	Lipoprotein
ILQ59_RS07930	COG2067	long-chain fatty acid transport protein
ILQ59_RS07935	COG3691	Protein conserved in bacteria
ILQ59_RS07950	COG2062	phosphohistidine phosphatase, SixA
ILQ59_RS07955	COG3539	Fimbrial protein
ILQ59_RS07960	COG3188	usher protein
ILQ59_RS07965	COG3121	Chaperone
ILQ59_RS07970	COG3539	Fimbrial protein
ILQ59_RS07975	COG3539	Fimbrial protein
ILQ59_RS07980	COG3539	Fimbrial protein
ILQ59_RS08010	COG0730	response to heat
ILQ59_RS08015	COG3101	peptidyl-lysine hydroxylation
ILQ59_RS08025	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
ILQ59_RS08025	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ILQ59_RS08030	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ILQ59_RS08035	COG2814	Major facilitator Superfamily
ILQ59_RS08050	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
ILQ59_RS08060	COG0586	Pfam SNARE associated Golgi protein
ILQ59_RS08070	COG0285	dihydrofolate synthase activity
ILQ59_RS08075	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
ILQ59_RS08080	COG1286	toxin biosynthetic process
ILQ59_RS08085	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
ILQ59_RS08090	COG0163	prenyltransferase activity
ILQ59_RS08095	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ILQ59_RS08100	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ILQ59_RS08105	COG4215	(ABC) transporter
ILQ59_RS08110	COG4160	amino acid transport
ILQ59_RS08115	COG4598	ABC transporter
ILQ59_RS08120	COG5464	transposase or invertase
ILQ59_RS08125	COG1090	epimerase
ILQ59_RS08130	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
ILQ59_RS08135	COG0625	glutathione transferase activity
ILQ59_RS08140	COG0625	glutathione transferase activity
ILQ59_RS08145	COG0622	Phosphoesterase
ILQ59_RS08150	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
ILQ59_RS08155	COG1288	antiporter activity
ILQ59_RS08160	COG0857	belongs to the CobB CobQ family
ILQ59_RS08160	COG0280	phosphate acetyltransferase
ILQ59_RS08165	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ILQ59_RS08180	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ILQ59_RS08185	COG0471	metal ion transport
ILQ59_RS08185	COG0490	domain, Protein
ILQ59_RS08195	COG0436	Aminotransferase
ILQ59_RS08200	COG0583	DNA-binding transcription factor activity
ILQ59_RS08220	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
ILQ59_RS08225	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
ILQ59_RS08230	COG1034	ATP synthesis coupled electron transport
ILQ59_RS08245	COG0839	Belongs to the complex I subunit 6 family
ILQ59_RS08255	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ILQ59_RS08260	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ILQ59_RS08280	COG5160	protein modification by small protein removal
ILQ59_RS08285	COG1234	tRNA 3'-trailer cleavage
ILQ59_RS08290	COG2153	protein acetylation
ILQ59_RS08295	COG4575	ribosome binding
ILQ59_RS08300	COG1169	isochorismate synthase
ILQ59_RS08315	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
ILQ59_RS08325	COG0318	PFAM AMP-dependent synthetase and ligase
ILQ59_RS08370	COG0406	alpha-ribazole phosphatase activity
ILQ59_RS08390	COG1414	Transcriptional regulator
ILQ59_RS08395	COG4948	Mandelate Racemase Muconate Lactonizing
ILQ59_RS08400	COG2271	Major facilitator Superfamily
ILQ59_RS08410	COG5464	transposase or invertase
ILQ59_RS08415	COG0247	lactate metabolic process
ILQ59_RS08425	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
ILQ59_RS08430	COG2271	Major facilitator Superfamily
ILQ59_RS08435	COG0584	glycerophosphoryl diester phosphodiesterase
ILQ59_RS08445	COG0583	DNA-binding transcription factor activity
ILQ59_RS08450	COG2814	Major facilitator Superfamily
ILQ59_RS08455	COG3642	lipopolysaccharide core region biosynthetic process
ILQ59_RS08460	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ILQ59_RS08465	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ILQ59_RS08470	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ILQ59_RS08475	COG3468	outer membrane autotransporter barrel domain protein
ILQ59_RS08485	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
ILQ59_RS08490	COG4685	Uncharacterized protein conserved in bacteria (DUF2138)
ILQ59_RS08495	COG3234	Protein of unknown function (DUF1175)
ILQ59_RS08505	COG5445	Predicted secreted protein (DUF2300)
ILQ59_RS08510	COG5445	Predicted secreted protein (DUF2300)
ILQ59_RS08515	COG4676	Protein conserved in bacteria
ILQ59_RS08520	COG2205	protein histidine kinase activity
ILQ59_RS08520	COG0784	Response regulator, receiver
ILQ59_RS08525	COG2197	response regulator
ILQ59_RS08530	COG0642	Histidine kinase
ILQ59_RS08530	COG2198	Histidine kinase
ILQ59_RS08535	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
ILQ59_RS08540	COG1477	protein flavinylation
ILQ59_RS08545	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ILQ59_RS08545	COG2169	Transcriptional regulator
ILQ59_RS08550	COG3145	DNA-N1-methyladenine dioxygenase activity
ILQ59_RS08555	COG4615	Cyclic peptide transporter
ILQ59_RS08570	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
ILQ59_RS08570	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ILQ59_RS08575	COG3062	negative regulation of establishment of protein localization
ILQ59_RS08585	COG0437	4 iron, 4 sulfur cluster binding
ILQ59_RS08590	COG0348	domain, Protein
ILQ59_RS08595	COG3043	anaerobic respiration
ILQ59_RS08600	COG3005	denitrification pathway
ILQ59_RS08605	COG4133	protoheme IX ABC transporter activity
ILQ59_RS08610	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ILQ59_RS08615	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ILQ59_RS08620	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ILQ59_RS08630	COG1138	Cytochrome C-type biogenesis protein
ILQ59_RS08635	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ILQ59_RS08640	COG3088	subunit of a heme lyase
ILQ59_RS08640	COG4235	cytochrome complex assembly
ILQ59_RS08645	COG2197	response regulator
ILQ59_RS08650	COG3468	outer membrane autotransporter barrel domain protein
ILQ59_RS08660	COG3083	sulfuric ester hydrolase activity
ILQ59_RS08680	COG1061	Type III restriction enzyme res subunit
ILQ59_RS08685	COG1187	pseudouridine synthase activity
ILQ59_RS08690	COG2814	Major facilitator Superfamily
ILQ59_RS08700	COG4172	Belongs to the ABC transporter superfamily
ILQ59_RS08705	COG4239	(ABC) transporter, permease
ILQ59_RS08710	COG4174	ABC transporter (Permease)
ILQ59_RS08715	COG4166	transmembrane transport
ILQ59_RS08720	COG2200	EAL domain
ILQ59_RS08725	COG0791	NLP P60 protein
ILQ59_RS08730	COG0671	phosphoesterase, PA-phosphatase related
ILQ59_RS08735	COG0523	cobalamin synthesis protein
ILQ59_RS08740	COG0246	Mannitol dehydrogenase
ILQ59_RS08755	COG2814	Major facilitator Superfamily
ILQ59_RS08760	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ59_RS08760	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ59_RS08765	COG1105	Belongs to the carbohydrate kinase PfkB family
ILQ59_RS08770	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ILQ59_RS08770	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ILQ59_RS08770	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
ILQ59_RS08775	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ILQ59_RS08780	COG2313	pseudouridylate synthase activity
ILQ59_RS08785	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
ILQ59_RS08790	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ILQ59_RS08800	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
ILQ59_RS08805	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ILQ59_RS08805	COG1522	sequence-specific DNA binding
ILQ59_RS08815	COG2855	membrane
ILQ59_RS08820	COG0583	DNA-binding transcription factor activity
ILQ59_RS08825	COG0833	amino acid
ILQ59_RS08830	COG4771	TonB-dependent receptor
ILQ59_RS08835	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
ILQ59_RS08845	COG2311	Membrane
ILQ59_RS08850	COG1609	Transcriptional regulator
ILQ59_RS08855	COG1879	ABC-type sugar transport system periplasmic component
ILQ59_RS08860	COG1129	ABC transporter
ILQ59_RS08865	COG4211	Belongs to the binding-protein-dependent transport system permease family
ILQ59_RS08870	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
ILQ59_RS08870	COG0167	dihydroorotate dehydrogenase activity
ILQ59_RS08875	COG0493	'glutamate synthase
ILQ59_RS08885	COG2949	membrane
ILQ59_RS08895	COG1346	cytolysis
ILQ59_RS08910	COG2271	Major facilitator Superfamily
ILQ59_RS08925	COG0625	glutathione transferase activity
ILQ59_RS08930	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ILQ59_RS08935	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ILQ59_RS08945	COG1538	Outer membrane efflux protein
ILQ59_RS08950	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ59_RS08955	COG0586	Pfam SNARE associated Golgi protein
ILQ59_RS08965	COG1686	Belongs to the peptidase S11 family
ILQ59_RS08970	COG0277	FAD linked oxidase domain protein
ILQ59_RS08975	COG1472	Belongs to the glycosyl hydrolase 3 family
ILQ59_RS08980	COG1732	Glycine betaine
ILQ59_RS08985	COG1174	glycine betaine transport
ILQ59_RS08990	COG1125	glycine betaine transport
ILQ59_RS08995	COG1174	glycine betaine transport
ILQ59_RS09005	COG0789	Transcriptional regulator
ILQ59_RS09010	COG0582	viral genome integration into host DNA
ILQ59_RS09220	COG3772	lysozyme
ILQ59_RS09265	COG0740	serine-type endopeptidase activity
ILQ59_RS09340	COG5301	cellulose 1,4-beta-cellobiosidase activity
ILQ59_RS09355	COG3275	phosphorelay sensor kinase activity
ILQ59_RS09360	COG3279	Response regulator of the LytR AlgR family
ILQ59_RS09365	COG4807	Protein conserved in bacteria
ILQ59_RS09370	COG4808	Protein conserved in bacteria
ILQ59_RS09375	COG4715	Zinc finger, swim domain protein
ILQ59_RS09380	COG3552	Protein containing von Willebrand factor type A (VWA) domain
ILQ59_RS09385	COG2425	protein containing a von Willebrand factor type A (vWA) domain
ILQ59_RS09390	COG2425	protein containing a von Willebrand factor type A (vWA) domain
ILQ59_RS09395	COG0714	Associated with various cellular activities
ILQ59_RS09405	COG3831	ATPase activity
ILQ59_RS09425	COG0489	protein tyrosine kinase activity
ILQ59_RS09435	COG3539	Fimbrial protein
ILQ59_RS09440	COG3121	Chaperone
ILQ59_RS09450	COG3539	Fimbrial protein
ILQ59_RS09455	COG5455	response to cobalt ion
ILQ59_RS09460	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
ILQ59_RS09490	COG0351	phosphomethylpyrimidine kinase
ILQ59_RS09495	COG3757	hydrolase, family 25
ILQ59_RS09500	COG2188	Transcriptional regulator
ILQ59_RS09505	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ILQ59_RS09510	COG1397	ADP-ribosylglycohydrolase
ILQ59_RS09515	COG2211	Major facilitator Superfamily
ILQ59_RS09520	COG1830	Aldolase
ILQ59_RS09535	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ59_RS09540	COG3414	Phosphotransferase system galactitol-specific IIB component
ILQ59_RS09545	COG3775	system Galactitol-specific IIC component
ILQ59_RS09550	COG1063	alcohol dehydrogenase
ILQ59_RS09570	COG0826	peptidase U32
ILQ59_RS09575	COG3422	double-strand break repair
ILQ59_RS09580	COG0745	RESPONSE REGULATOR receiver
ILQ59_RS09585	COG2205	protein histidine kinase activity
ILQ59_RS09600	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ILQ59_RS09625	COG4245	von Willebrand factor, type A
ILQ59_RS09630	COG0631	protein serine/threonine phosphatase activity
ILQ59_RS09635	COG4248	protein with protein kinase and helix-hairpin-helix DNA-binding domains
ILQ59_RS09640	COG0443	Heat shock 70 kDa protein
ILQ59_RS09645	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
ILQ59_RS09655	COG0572	uridine kinase
ILQ59_RS09665	COG2982	Protein involved in outer membrane biogenesis
ILQ59_RS09680	COG1253	flavin adenine dinucleotide binding
ILQ59_RS09690	COG1596	polysaccharide export
ILQ59_RS09695	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ILQ59_RS09700	COG0489	protein tyrosine kinase activity
ILQ59_RS09700	COG3206	protein involved in exopolysaccharide biosynthesis
ILQ59_RS09705	COG0463	Glycosyl transferase, family 2
ILQ59_RS09710	COG1045	serine acetyltransferase
ILQ59_RS09715	COG0438	transferase activity, transferring glycosyl groups
ILQ59_RS09725	COG1216	Glycosyl transferase, family 2
ILQ59_RS09730	COG0110	maltose O-acetyltransferase activity
ILQ59_RS09735	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
ILQ59_RS09740	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ILQ59_RS09745	COG1051	belongs to the nudix hydrolase family
ILQ59_RS09750	COG0297	glycogen (starch) synthase activity
ILQ59_RS09755	COG0662	Cupin 2, conserved barrel domain protein
ILQ59_RS09755	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
ILQ59_RS09760	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ILQ59_RS09765	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ILQ59_RS09770	COG2244	polysaccharide biosynthetic process
ILQ59_RS09775	COG2327	Polysaccharide pyruvyl transferase
ILQ59_RS09780	COG0438	transferase activity, transferring glycosyl groups
ILQ59_RS09790	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ILQ59_RS09795	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ILQ59_RS09820	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ILQ59_RS09830	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
ILQ59_RS09835	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ILQ59_RS09840	COG1051	belongs to the nudix hydrolase family
ILQ59_RS09845	COG0662	Cupin 2, conserved barrel domain protein
ILQ59_RS09845	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
ILQ59_RS09850	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ILQ59_RS09860	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
ILQ59_RS09865	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
ILQ59_RS09890	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
ILQ59_RS09895	COG0131	Imidazoleglycerol-phosphate dehydratase
ILQ59_RS09895	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
ILQ59_RS09905	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
ILQ59_RS09920	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ILQ59_RS09925	COG0583	DNA-binding transcription factor activity
ILQ59_RS09935	COG0531	amino acid
ILQ59_RS09940	COG2391	methyltransferase activity
ILQ59_RS09945	COG0425	Belongs to the sulfur carrier protein TusA family
ILQ59_RS09950	COG2925	Exonuclease
ILQ59_RS10215	COG3772	lysozyme
ILQ59_RS10340	COG5301	cellulose 1,4-beta-cellobiosidase activity
ILQ59_RS10350	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
ILQ59_RS10360	COG1686	Belongs to the peptidase S11 family
ILQ59_RS10370	COG1289	transmembrane transporter activity
ILQ59_RS10380	COG4917	ethanolamine utilization protein
ILQ59_RS10415	COG2003	Belongs to the UPF0758 family
ILQ59_RS10475	COG4372	Transposase
ILQ59_RS10480	COG3436	PFAM IS66 Orf2 family protein
ILQ59_RS10490	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
ILQ59_RS10505	COG1376	ErfK ybiS ycfS ynhG family protein
ILQ59_RS10515	COG0583	DNA-binding transcription factor activity
ILQ59_RS10520	COG0583	DNA-binding transcription factor activity
ILQ59_RS10530	COG0534	Mate efflux family protein
ILQ59_RS10540	COG0217	transcriptional regulatory protein
ILQ59_RS10545	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ILQ59_RS10550	COG0477	Major facilitator Superfamily
ILQ59_RS10600	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ILQ59_RS10645	COG1846	Transcriptional regulator
ILQ59_RS10690	COG1403	HNH endonuclease
ILQ59_RS10695	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
ILQ59_RS10750	COG3772	lysozyme
ILQ59_RS10780	COG4220	transposase activity
ILQ59_RS10865	COG5301	cellulose 1,4-beta-cellobiosidase activity
ILQ59_RS10895	COG0582	viral genome integration into host DNA
ILQ59_RS10905	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ILQ59_RS10950	COG1846	Transcriptional regulator
ILQ59_RS10955	COG1484	DNA-dependent DNA replication
ILQ59_RS10960	COG1846	Transcriptional regulator
ILQ59_RS10970	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ILQ59_RS10990	COG1403	HNH endonuclease
ILQ59_RS10995	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
ILQ59_RS11000	COG0484	heat shock protein binding
ILQ59_RS11035	COG3772	lysozyme
ILQ59_RS11070	COG0740	serine-type endopeptidase activity
ILQ59_RS11145	COG5301	cellulose 1,4-beta-cellobiosidase activity
ILQ59_RS11165	COG3038	cytochrome b561
ILQ59_RS11170	COG3443	Belongs to the bacterial solute-binding protein 9 family
ILQ59_RS11185	COG2351	hydroxyisourate hydrolase activity
ILQ59_RS11190	COG0745	RESPONSE REGULATOR receiver
ILQ59_RS11195	COG2205	protein histidine kinase activity
ILQ59_RS11215	COG1418	mRNA catabolic process
ILQ59_RS11220	COG0270	DNA (cytosine-5-)-methyltransferase activity
ILQ59_RS11225	COG3727	T/G mismatch-specific endonuclease activity
ILQ59_RS11230	COG0697	spore germination
ILQ59_RS11235	COG2354	Protein conserved in bacteria
ILQ59_RS11240	COG5475	Uncharacterized small protein (DUF2158)
ILQ59_RS11245	COG3706	GGDEF domain
ILQ59_RS11265	COG2197	response regulator
ILQ59_RS11270	COG1684	flagellar biosynthetic protein fliR
ILQ59_RS11275	COG1987	bacterial-type flagellum assembly
ILQ59_RS11280	COG1338	Plays a role in the flagellum-specific transport system
ILQ59_RS11285	COG3190	flagellar
ILQ59_RS11290	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ILQ59_RS11295	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ILQ59_RS11300	COG1580	Controls the rotational direction of flagella during chemotaxis
ILQ59_RS11305	COG3144	bacterial-type flagellum assembly
ILQ59_RS11310	COG2882	bacterial-type flagellum organization
ILQ59_RS11315	COG1157	protein secretion by the type III secretion system
ILQ59_RS11320	COG1317	bacterial-type flagellum organization
ILQ59_RS11325	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ILQ59_RS11330	COG1766	The M ring may be actively involved in energy transduction
ILQ59_RS11345	COG0454	-acetyltransferase
ILQ59_RS11355	COG0454	-acetyltransferase
ILQ59_RS11360	COG2135	peptidase activity
ILQ59_RS11365	COG0425	Belongs to the sulfur carrier protein TusA family
ILQ59_RS11370	COG2391	methyltransferase activity
ILQ59_RS11380	COG0366	Alpha amylase catalytic
ILQ59_RS11390	COG1516	flagellar protein fliS
ILQ59_RS11395	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
ILQ59_RS11405	COG1191	sigma factor activity
ILQ59_RS11415	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ILQ59_RS11425	COG0765	amino acid transport
ILQ59_RS11430	COG1126	abc transporter atp-binding protein
ILQ59_RS11435	COG2197	response regulator
ILQ59_RS11450	COG2197	response regulator
ILQ59_RS11490	COG2826	transposase and inactivated derivatives, IS30 family
ILQ59_RS11535	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
ILQ59_RS11635	COG4974	Belongs to the 'phage' integrase family
ILQ59_RS11640	COG3318	Belongs to the UPF0149 family
ILQ59_RS11640	COG3012	SEC-C Motif Domain Protein
ILQ59_RS11645	COG0814	amino acid
ILQ59_RS11655	COG1528	Iron-storage protein
ILQ59_RS11675	COG1528	Iron-storage protein
ILQ59_RS11680	COG1879	ABC-type sugar transport system periplasmic component
ILQ59_RS11685	COG1129	ABC transporter
ILQ59_RS11690	COG1172	Belongs to the binding-protein-dependent transport system permease family
ILQ59_RS11695	COG1877	trehalose-phosphatase activity
ILQ59_RS11705	COG0589	response to stress
ILQ59_RS11720	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
ILQ59_RS11725	COG1360	Flagellar Motor Protein
ILQ59_RS11730	COG2198	Histidine kinase
ILQ59_RS11730	COG0643	Histidine kinase
ILQ59_RS11735	COG0835	chemotaxis
ILQ59_RS11740	COG0840	transmembrane signaling receptor activity
ILQ59_RS11745	COG0840	transmembrane signaling receptor activity
ILQ59_RS11750	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
ILQ59_RS11755	COG2201	protein-glutamate methylesterase activity
ILQ59_RS11760	COG0745	RESPONSE REGULATOR receiver
ILQ59_RS11770	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
ILQ59_RS11775	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
ILQ59_RS11785	COG3755	Protein conserved in bacteria
ILQ59_RS11795	COG3102	Protein conserved in bacteria
ILQ59_RS11805	COG3005	denitrification pathway
ILQ59_RS11810	COG0243	molybdopterin cofactor binding
ILQ59_RS11825	COG3788	relative of glutathione S-transferase, MAPEG superfamily
ILQ59_RS11830	COG1801	Protein of unknown function DUF72
ILQ59_RS11835	COG1335	isochorismatase
ILQ59_RS11840	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
ILQ59_RS11845	COG0494	nUDIX hydrolase
ILQ59_RS11850	COG0217	transcriptional regulatory protein
ILQ59_RS11880	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ILQ59_RS11890	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
ILQ59_RS11895	COG0739	heme binding
ILQ59_RS11900	COG1560	Kdo2-lipid A biosynthetic process
ILQ59_RS11905	COG0469	pyruvate kinase activity
ILQ59_RS11910	COG1737	Transcriptional regulator
ILQ59_RS11915	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
ILQ59_RS11920	COG0129	dihydroxy-acid dehydratase activity
ILQ59_RS11925	COG0800	Aldolase
ILQ59_RS11930	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
ILQ59_RS11935	COG3141	response to X-ray
ILQ59_RS11945	COG2979	Protein of unknown function (DUF533)
ILQ59_RS11950	COG1770	oligopeptidase
ILQ59_RS11955	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ILQ59_RS11960	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ILQ59_RS11970	COG2372	response to copper ion
ILQ59_RS11975	COG1276	copper resistance
ILQ59_RS11985	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
ILQ59_RS12005	COG3008	intermembrane lipid transfer
ILQ59_RS12010	COG2995	paraquat-inducible protein a
ILQ59_RS12015	COG1956	GAF domain-containing protein
ILQ59_RS12025	COG0793	Belongs to the peptidase S41A family
ILQ59_RS12035	COG2814	Major facilitator Superfamily
ILQ59_RS12040	COG1414	Transcriptional regulator
ILQ59_RS12070	COG2226	methyltransferase
ILQ59_RS12085	COG3716	PTS system mannose fructose sorbose family IID component
ILQ59_RS12090	COG3715	PTS system
ILQ59_RS12095	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ILQ59_RS12095	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ59_RS12100	COG1253	flavin adenine dinucleotide binding
ILQ59_RS12105	COG2200	EAL domain
ILQ59_RS12110	COG1760	l-serine dehydratase
ILQ59_RS12120	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
ILQ59_RS12135	COG0251	oxidation-reduction process
ILQ59_RS12140	COG1199	ATP-dependent helicase activity
ILQ59_RS12145	COG1214	PFAM Peptidase M22, glycoprotease
ILQ59_RS12150	COG3065	identical protein binding
ILQ59_RS12155	COG0318	PFAM AMP-dependent synthetase and ligase
ILQ59_RS12160	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
ILQ59_RS12165	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ILQ59_RS12170	COG4638	Rieske (2fe-2S)
ILQ59_RS12175	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ILQ59_RS12180	COG0473	3-isopropylmalate dehydrogenase activity
ILQ59_RS12185	COG0583	DNA-binding transcription factor activity
ILQ59_RS12190	COG1280	lysine exporter protein (LysE YggA)
ILQ59_RS12195	COG3615	Tellurite resistance protein tehB
ILQ59_RS12205	COG2261	transglycosylase associated protein
ILQ59_RS12225	COG3042	response to heat
ILQ59_RS12230	COG3189	MarR family transcriptional regulator
ILQ59_RS12235	COG2807	transmembrane transport
ILQ59_RS12240	COG2207	Transcriptional regulator
ILQ59_RS12255	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ILQ59_RS12260	COG2199	diguanylate cyclase activity
ILQ59_RS12265	COG2199	diguanylate cyclase activity
ILQ59_RS12275	COG2766	serine protein kinase
ILQ59_RS12280	COG3713	MltA-interacting MipA family protein
ILQ59_RS12285	COG0656	L-ascorbic acid biosynthetic process
ILQ59_RS12290	COG0676	glucose-6-phosphate 1-epimerase activity
ILQ59_RS12295	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ILQ59_RS12305	COG3139	Protein of unknown function (DUF1315)
ILQ59_RS12310	COG1063	alcohol dehydrogenase
ILQ59_RS12315	COG2271	Major facilitator Superfamily
ILQ59_RS12320	COG1063	alcohol dehydrogenase
ILQ59_RS12325	COG0191	fructose-bisphosphate aldolase activity
ILQ59_RS12330	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ILQ59_RS12335	COG0667	Aldo Keto reductase
ILQ59_RS12340	COG1349	DNA-binding transcription factor activity
ILQ59_RS12355	COG1335	isochorismatase
ILQ59_RS12360	COG0252	asparaginase activity
ILQ59_RS12370	COG0616	signal peptide processing
ILQ59_RS12375	COG0778	Nitroreductase
ILQ59_RS12380	COG0709	Synthesizes selenophosphate from selenide and ATP
ILQ59_RS12385	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
ILQ59_RS12395	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ILQ59_RS12405	COG0494	nUDIX hydrolase
ILQ59_RS12410	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ILQ59_RS12415	COG2897	thiosulfate sulfurtransferase activity
ILQ59_RS12420	COG4136	ATPase activity
ILQ59_RS12425	COG4135	transport system, permease component
ILQ59_RS12430	COG4134	Bacterial extracellular solute-binding protein
ILQ59_RS12435	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ILQ59_RS12440	COG0398	Pfam SNARE associated Golgi protein
ILQ59_RS12450	COG0398	Pfam SNARE associated Golgi protein
ILQ59_RS12455	COG0708	Exodeoxyribonuclease III
ILQ59_RS12485	COG3678	ATP-independent chaperone mediated protein folding
ILQ59_RS12495	COG0322	excinuclease ABC activity
ILQ59_RS12505	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ILQ59_RS12510	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
ILQ59_RS12515	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
ILQ59_RS12520	COG1447	Phosphotransferase system cellobiose-specific component IIA
ILQ59_RS12525	COG1917	Cupin 2, conserved barrel domain protein
ILQ59_RS12525	COG2169	Transcriptional regulator
ILQ59_RS12530	COG1486	melibiose metabolic process
ILQ59_RS12540	COG0753	catalase activity
ILQ59_RS12555	COG1823	symporter activity
ILQ59_RS12560	COG1988	membrane-bound metal-dependent
ILQ59_RS12565	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ILQ59_RS12575	COG3001	Fructosamine kinase
ILQ59_RS12585	COG1105	Belongs to the carbohydrate kinase PfkB family
ILQ59_RS12590	COG3137	Salt-induced outer membrane protein
ILQ59_RS12635	COG0072	phenylalanine-tRNA ligase activity
ILQ59_RS12635	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ILQ59_RS12650	COG0386	Belongs to the glutathione peroxidase family
ILQ59_RS12660	COG0791	NLP P60 protein
ILQ59_RS12665	COG2200	EAL domain
ILQ59_RS12675	COG4256	Hemin uptake protein
ILQ59_RS12680	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ILQ59_RS12690	COG0574	Belongs to the PEP-utilizing enzyme family
ILQ59_RS12690	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ILQ59_RS12695	COG0318	PFAM AMP-dependent synthetase and ligase
ILQ59_RS12700	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
ILQ59_RS12705	COG0644	oxidoreductase
ILQ59_RS12710	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
ILQ59_RS12715	COG2086	electron transfer activity
ILQ59_RS12720	COG2207	Transcriptional regulator
ILQ59_RS12720	COG1917	Cupin 2, conserved barrel domain protein
ILQ59_RS12725	COG1960	acyl-CoA dehydrogenase activity
ILQ59_RS12730	COG4670	ketone body catabolic process
ILQ59_RS12745	COG2271	Major facilitator Superfamily
ILQ59_RS12750	COG0738	Major facilitator superfamily
ILQ59_RS12765	COG0628	permease
ILQ59_RS12770	COG0247	lactate metabolic process
ILQ59_RS12770	COG0277	FAD linked oxidase domain protein
ILQ59_RS12775	COG2050	protein possibly involved in aromatic compounds catabolism
ILQ59_RS12785	COG0316	Belongs to the HesB IscA family
ILQ59_RS12790	COG0719	Fe-S assembly protein
ILQ59_RS12795	COG0396	ATPase activity
ILQ59_RS12800	COG0719	Fe-S assembly protein
ILQ59_RS12815	COG1376	ErfK ybiS ycfS ynhG family protein
ILQ59_RS12820	COG4238	major outer membrane lipoprotein
ILQ59_RS12825	COG0469	pyruvate kinase activity
ILQ59_RS12835	COG0437	4 iron, 4 sulfur cluster binding
ILQ59_RS12840	COG2414	aldehyde ferredoxin oxidoreductase
ILQ59_RS12850	COG0437	4 iron, 4 sulfur cluster binding
ILQ59_RS12855	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
ILQ59_RS12865	COG4529	Protein conserved in bacteria
ILQ59_RS12885	COG3468	outer membrane autotransporter barrel domain protein
ILQ59_RS12895	COG0307	riboflavin synthase, alpha
ILQ59_RS12900	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
ILQ59_RS12905	COG2814	Major facilitator Superfamily
ILQ59_RS12910	COG0583	DNA-binding transcription factor activity
ILQ59_RS12925	COG2814	Major facilitator Superfamily
ILQ59_RS12930	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ILQ59_RS12935	COG0791	NLP P60 protein
ILQ59_RS12940	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
ILQ59_RS12945	COG1201	RNA secondary structure unwinding
ILQ59_RS12955	COG0346	lactoylglutathione lyase activity
ILQ59_RS12960	COG1902	pentaerythritol trinitrate reductase activity
ILQ59_RS12965	COG1309	transcriptional regulator
ILQ59_RS12970	COG3313	Fe-S protein
ILQ59_RS12980	COG2032	superoxide dismutase activity
ILQ59_RS12985	COG1289	transmembrane transporter activity
ILQ59_RS12990	COG1566	PFAM secretion protein HlyD family protein
ILQ59_RS13005	COG3133	Outer membrane lipoprotein
ILQ59_RS13015	COG3895	Periplasmic Protein
ILQ59_RS13030	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
ILQ59_RS13035	COG0625	glutathione transferase activity
ILQ59_RS13040	COG3104	oligopeptide transport
ILQ59_RS13045	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ILQ59_RS13055	COG4659	FMN binding
ILQ59_RS13065	COG4656	Part of a membrane complex involved in electron transport
ILQ59_RS13095	COG0673	inositol 2-dehydrogenase activity
ILQ59_RS13105	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
ILQ59_RS13110	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ILQ59_RS13110	COG1263	PTS System
ILQ59_RS13115	COG1609	Transcriptional regulator
ILQ59_RS13120	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ59_RS13125	COG1309	transcriptional regulator
ILQ59_RS13145	COG5339	Protein conserved in bacteria
ILQ59_RS13150	COG1482	cell wall glycoprotein biosynthetic process
ILQ59_RS13155	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
ILQ59_RS13155	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
ILQ59_RS13160	COG0114	fumarate hydratase activity
ILQ59_RS13170	COG2205	protein histidine kinase activity
ILQ59_RS13175	COG0745	RESPONSE REGULATOR receiver
ILQ59_RS13180	COG3136	membrane protein required for alginate biosynthesis
ILQ59_RS13190	COG0531	amino acid
ILQ59_RS13200	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
ILQ59_RS13205	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
ILQ59_RS13210	COG0628	permease
ILQ59_RS13225	COG3591	Belongs to the peptidase S1B family
ILQ59_RS13240	COG2814	Major facilitator Superfamily
ILQ59_RS13245	COG0583	DNA-binding transcription factor activity
ILQ59_RS13250	COG1940	carbohydrate kinase activity
ILQ59_RS13255	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
ILQ59_RS13265	COG3381	protein complex oligomerization
ILQ59_RS13270	COG3302	dmso reductase anchor subunit
ILQ59_RS13275	COG0437	4 iron, 4 sulfur cluster binding
ILQ59_RS13280	COG0243	molybdopterin cofactor binding
ILQ59_RS13285	COG0243	molybdopterin cofactor binding
ILQ59_RS13300	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ILQ59_RS13325	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ILQ59_RS13360	COG1396	sequence-specific DNA binding
ILQ59_RS13415	COG1403	HNH endonuclease
ILQ59_RS13420	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
ILQ59_RS13465	COG3772	lysozyme
ILQ59_RS13590	COG5301	cellulose 1,4-beta-cellobiosidase activity
ILQ59_RS13615	COG4372	Transposase
ILQ59_RS13620	COG3436	PFAM IS66 Orf2 family protein
ILQ59_RS13700	COG1846	Transcriptional regulator
ILQ59_RS13735	COG3111	PFAM Bacterial OB fold (BOF) protein
ILQ59_RS13745	COG1403	HNH endonuclease
ILQ59_RS13750	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
ILQ59_RS13765	COG2207	Transcriptional regulator
ILQ59_RS13805	COG3772	lysozyme
ILQ59_RS13835	COG4220	transposase activity
ILQ59_RS13855	COG1030	water channel activity
ILQ59_RS13950	COG5301	cellulose 1,4-beta-cellobiosidase activity
ILQ59_RS13975	COG0246	Mannitol dehydrogenase
ILQ59_RS13985	COG1802	Transcriptional regulator
ILQ59_RS13990	COG4221	oxidoreductase activity
ILQ59_RS13995	COG0339	signal peptide processing
ILQ59_RS14000	COG1546	Belongs to the CinA family
ILQ59_RS14005	COG3111	PFAM Bacterial OB fold (BOF) protein
ILQ59_RS14010	COG3706	GGDEF domain
ILQ59_RS14030	COG2814	Major facilitator Superfamily
ILQ59_RS14035	COG0697	spore germination
ILQ59_RS14045	COG4977	sequence-specific DNA binding
ILQ59_RS14050	COG1846	Transcriptional regulator
ILQ59_RS14055	COG2095	MarC family integral membrane protein
ILQ59_RS14060	COG2814	Major facilitator Superfamily
ILQ59_RS14070	COG0583	DNA-binding transcription factor activity
ILQ59_RS14075	COG1012	belongs to the aldehyde dehydrogenase family
ILQ59_RS14080	COG2066	Belongs to the glutaminase family
ILQ59_RS14090	COG2199	diguanylate cyclase activity
ILQ59_RS14100	COG3781	membrane
ILQ59_RS14115	COG1830	Aldolase
ILQ59_RS14125	COG1172	Belongs to the binding-protein-dependent transport system permease family
ILQ59_RS14130	COG1172	Belongs to the binding-protein-dependent transport system permease family
ILQ59_RS14135	COG1129	ABC transporter
ILQ59_RS14145	COG1070	Carbohydrate kinase
ILQ59_RS14150	COG2911	Protein conserved in bacteria
ILQ59_RS14150	COG3210	domain, Protein
ILQ59_RS14180	COG2207	Transcriptional regulator
ILQ59_RS14185	COG3119	arylsulfatase activity
ILQ59_RS14190	COG0641	radical SAM
ILQ59_RS14200	COG4178	(ABC) transporter
ILQ59_RS14205	COG4771	TonB-dependent receptor
ILQ59_RS14210	COG0612	Peptidase, M16
ILQ59_RS14215	COG0076	glutamate decarboxylase activity
ILQ59_RS14220	COG0531	amino acid
ILQ59_RS14225	COG1649	PFAM Uncharacterised BCR, COG1649
ILQ59_RS14235	COG3706	GGDEF domain
ILQ59_RS14245	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
ILQ59_RS14250	COG0747	negative chemotaxis
ILQ59_RS14255	COG0601	transmembrane transport
ILQ59_RS14260	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ILQ59_RS14265	COG0444	Belongs to the ABC transporter superfamily
ILQ59_RS14270	COG4608	Belongs to the ABC transporter superfamily
ILQ59_RS14275	COG1764	response to oxidative stress
ILQ59_RS14295	COG1064	alcohol dehydrogenase
ILQ59_RS14300	COG3093	addiction module antidote protein HigA
ILQ59_RS14305	COG2864	formate dehydrogenase
ILQ59_RS14310	COG0437	4 iron, 4 sulfur cluster binding
ILQ59_RS14320	COG0697	spore germination
ILQ59_RS14335	COG4886	Leucine-rich repeat (LRR) protein
ILQ59_RS14340	COG4886	Leucine-rich repeat (LRR) protein
ILQ59_RS14345	COG2223	nitrite transmembrane transporter activity
ILQ59_RS14350	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
ILQ59_RS14355	COG1140	nitrate reductase beta subunit
ILQ59_RS14360	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
ILQ59_RS14365	COG2181	nitrate reductase activity
ILQ59_RS14370	COG0384	phenazine biosynthesis protein PhzF
ILQ59_RS14380	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ILQ59_RS14410	COG3209	COG3209 Rhs family protein
ILQ59_RS14425	COG0625	glutathione transferase activity
ILQ59_RS14430	COG1113	amino acid transport
ILQ59_RS14435	COG3391	amine dehydrogenase activity
ILQ59_RS14440	COG4772	TonB-dependent receptor
ILQ59_RS14445	COG1802	Transcriptional regulator
ILQ59_RS14450	COG2130	NADP-dependent
ILQ59_RS14455	COG1247	-acetyltransferase
ILQ59_RS14460	COG3238	Protein conserved in bacteria
ILQ59_RS14485	COG1177	transmembrane transport
ILQ59_RS14490	COG1176	ABC-type spermidine putrescine transport system, permease component I
ILQ59_RS14495	COG3842	ATPase activity
ILQ59_RS14500	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
ILQ59_RS14505	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ILQ59_RS14510	COG1598	PFAM Uncharacterised protein family UPF0150
ILQ59_RS14515	COG1724	mRNA binding
ILQ59_RS14525	COG0826	peptidase U32
ILQ59_RS14530	COG1396	sequence-specific DNA binding
ILQ59_RS14535	COG3135	benzoate transporter
ILQ59_RS14545	COG0500	methyltransferase
ILQ59_RS14550	COG1275	C4-dicarboxylate transporter malic acid transport protein
ILQ59_RS14555	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ILQ59_RS14565	COG2841	Protein conserved in bacteria
ILQ59_RS14575	COG5383	Protein conserved in bacteria
ILQ59_RS14580	COG0583	DNA-binding transcription factor activity
ILQ59_RS14585	COG0840	transmembrane signaling receptor activity
ILQ59_RS14600	COG3038	cytochrome b561
ILQ59_RS14605	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ILQ59_RS14610	COG1012	belongs to the aldehyde dehydrogenase family
ILQ59_RS14615	COG1434	Gram-negative-bacterium-type cell wall biogenesis
ILQ59_RS14640	COG1643	Atp-dependent helicase
ILQ59_RS14645	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ILQ59_RS14650	COG0671	phosphoesterase, PA-phosphatase related
ILQ59_RS14650	COG2453	phosphatase
ILQ59_RS14655	COG2267	carboxylic ester hydrolase activity
ILQ59_RS14660	COG4589	Belongs to the CDS family
ILQ59_RS14665	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ILQ59_RS14675	COG0667	Aldo Keto reductase
ILQ59_RS14685	COG3784	Protein of unknown function (DUF1318)
ILQ59_RS14695	COG2911	Protein conserved in bacteria
ILQ59_RS14700	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ILQ59_RS14705	COG3187	Heat shock protein
ILQ59_RS14710	COG3042	response to heat
ILQ59_RS14715	COG0674	pyruvate-flavodoxin oxidoreductase activity
ILQ59_RS14715	COG1013	pyruvate-flavodoxin oxidoreductase activity
ILQ59_RS14715	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
ILQ59_RS14715	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ILQ59_RS14725	COG0589	response to stress
ILQ59_RS14735	COG0513	Belongs to the DEAD box helicase family
ILQ59_RS14750	COG3706	GGDEF domain
ILQ59_RS14755	COG2840	Smr protein MutS2
ILQ59_RS14760	COG0583	DNA-binding transcription factor activity
ILQ59_RS14765	COG1473	amidohydrolase
ILQ59_RS14770	COG1473	amidohydrolase
ILQ59_RS14780	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ILQ59_RS14785	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ILQ59_RS14790	COG0589	response to stress
ILQ59_RS14795	COG3182	Iron-regulated membrane protein
ILQ59_RS14800	COG0668	transmembrane transport
ILQ59_RS14805	COG4166	transmembrane transport
ILQ59_RS14810	COG0583	DNA-binding transcription factor activity
ILQ59_RS14815	COG1073	alpha beta
ILQ59_RS14825	COG0702	epimerase
ILQ59_RS14830	COG2866	Carboxypeptidase
ILQ59_RS14835	COG4948	Mandelate Racemase Muconate Lactonizing
ILQ59_RS14840	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
ILQ59_RS14845	COG3283	Transcriptional regulator of aromatic amino acids metabolism
ILQ59_RS14855	COG3106	COG3106 Predicted ATPase
ILQ59_RS14860	COG1609	Transcriptional regulator
ILQ59_RS14870	COG3842	ATPase activity
ILQ59_RS14875	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ILQ59_RS14880	COG1554	hydrolase, family 65, central catalytic
ILQ59_RS14885	COG0673	inositol 2-dehydrogenase activity
ILQ59_RS14890	COG1082	Xylose isomerase domain protein TIM barrel
ILQ59_RS14895	COG1063	alcohol dehydrogenase
ILQ59_RS14900	COG0395	ABC-type sugar transport system, permease component
ILQ59_RS14905	COG1175	transmembrane transport
ILQ59_RS14920	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ILQ59_RS14930	COG1983	PspC domain protein
ILQ59_RS14940	COG1842	Phage shock protein A
ILQ59_RS14945	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
ILQ59_RS14950	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ILQ59_RS14955	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ILQ59_RS14960	COG1012	belongs to the aldehyde dehydrogenase family
ILQ59_RS14965	COG1396	sequence-specific DNA binding
ILQ59_RS14965	COG1917	Cupin 2, conserved barrel domain protein
ILQ59_RS14975	COG0174	glutamine synthetase
ILQ59_RS14985	COG0531	amino acid
ILQ59_RS14995	COG4166	transmembrane transport
ILQ59_RS15000	COG4168	peptide transport system, permease
ILQ59_RS15005	COG4171	peptide transport system, permease
ILQ59_RS15010	COG4172	Belongs to the ABC transporter superfamily
ILQ59_RS15015	COG4172	Belongs to the ABC transporter superfamily
ILQ59_RS15020	COG2814	Major facilitator Superfamily
ILQ59_RS15035	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ILQ59_RS15045	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
ILQ59_RS15050	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ILQ59_RS15050	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ILQ59_RS15060	COG5001	Diguanylate cyclase
ILQ59_RS15070	COG1349	DNA-binding transcription factor activity
ILQ59_RS15080	COG0023	Translation Initiation Factor
ILQ59_RS15090	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
ILQ59_RS15095	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
ILQ59_RS15100	COG0671	phosphoesterase, PA-phosphatase related
ILQ59_RS15110	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ILQ59_RS15130	COG0583	DNA-binding transcription factor activity
ILQ59_RS15135	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
ILQ59_RS15145	COG0616	signal peptide processing
ILQ59_RS15150	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ59_RS15155	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
ILQ59_RS15160	COG1187	pseudouridine synthase activity
ILQ59_RS15165	COG4907	membrane protein (DUF2207)
ILQ59_RS15170	COG0009	L-threonylcarbamoyladenylate synthase
ILQ59_RS15175	COG0613	PHP domain protein
ILQ59_RS15185	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
ILQ59_RS15190	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ILQ59_RS15190	COG0512	Glutamine amidotransferase of anthranilate synthase
ILQ59_RS15195	COG0134	indole-3-glycerol-phosphate synthase activity
ILQ59_RS15195	COG0135	phosphoribosylanthranilate isomerase activity
ILQ59_RS15210	COG3729	General stress protein
ILQ59_RS15215	COG3685	Protein conserved in bacteria
ILQ59_RS15220	COG3685	Protein conserved in bacteria
ILQ59_RS15270	COG3436	PFAM IS66 Orf2 family protein
ILQ59_RS15275	COG4372	Transposase
ILQ59_RS15320	COG5301	cellulose 1,4-beta-cellobiosidase activity
ILQ59_RS15450	COG3772	lysozyme
ILQ59_RS15500	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
ILQ59_RS15505	COG1403	HNH endonuclease
ILQ59_RS15540	COG1484	DNA-dependent DNA replication
ILQ59_RS15545	COG1846	Transcriptional regulator
ILQ59_RS15595	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ILQ59_RS15605	COG0582	viral genome integration into host DNA
ILQ59_RS15610	COG3047	cAMP biosynthetic process
ILQ59_RS15630	COG1607	acyl-coa hydrolase
ILQ59_RS15635	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
ILQ59_RS15640	COG2350	Protein conserved in bacteria
ILQ59_RS15645	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ILQ59_RS15665	COG4608	Belongs to the ABC transporter superfamily
ILQ59_RS15670	COG0444	Belongs to the ABC transporter superfamily
ILQ59_RS15675	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ILQ59_RS15680	COG0601	transmembrane transport
ILQ59_RS15685	COG4166	transmembrane transport
ILQ59_RS15690	COG2095	MarC family integral membrane protein
ILQ59_RS15695	COG1454	alcohol dehydrogenase
ILQ59_RS15695	COG1012	belongs to the aldehyde dehydrogenase family
ILQ59_RS15700	COG1435	thymidine kinase activity
ILQ59_RS15710	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ILQ59_RS15715	COG0745	RESPONSE REGULATOR receiver
ILQ59_RS15720	COG1752	Esterase of the alpha-beta hydrolase superfamily
ILQ59_RS15730	COG0788	formyltetrahydrofolate deformylase activity
ILQ59_RS15760	COG2181	nitrate reductase activity
ILQ59_RS15765	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
ILQ59_RS15770	COG1140	nitrate reductase beta subunit
ILQ59_RS15775	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
ILQ59_RS15780	COG2223	nitrite transmembrane transporter activity
ILQ59_RS15785	COG3850	Histidine kinase
ILQ59_RS15790	COG2197	response regulator
ILQ59_RS15795	COG4932	domain protein
ILQ59_RS15800	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
ILQ59_RS15805	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
ILQ59_RS15810	COG4572	Cation transport regulator
ILQ59_RS15815	COG0387	Pfam Sodium calcium exchanger
ILQ59_RS15835	COG2912	Transglutaminase-like superfamily
ILQ59_RS15840	COG3094	Invasion gene expression up-regulator, SirB
ILQ59_RS15870	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ILQ59_RS15875	COG0659	secondary active sulfate transmembrane transporter activity
ILQ59_RS15890	COG0012	GTP binding
ILQ59_RS15900	COG2376	Dihydroxyacetone kinase
ILQ59_RS15905	COG1461	Dihydroxyacetone kinase
ILQ59_RS15910	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ILQ59_RS15910	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
ILQ59_RS15910	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ59_RS15920	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ILQ59_RS15925	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ILQ59_RS15930	COG1120	ATPase activity
ILQ59_RS15940	COG0157	Belongs to the NadC ModD family
ILQ59_RS15975	COG1619	proteins homologs of microcin C7 resistance protein MccF
ILQ59_RS15990	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ILQ59_RS16000	COG2719	SpoVR family
ILQ59_RS16015	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
ILQ59_RS16020	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ILQ59_RS16025	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
ILQ59_RS16040	COG0179	Fumarylacetoacetate (FAA) hydrolase
ILQ59_RS16070	COG2894	cell division
ILQ59_RS16095	COG4571	Outer membrane protease
ILQ59_RS16105	COG4372	Transposase
ILQ59_RS16110	COG3436	PFAM IS66 Orf2 family protein
ILQ59_RS16125	COG0500	methyltransferase
ILQ59_RS16130	COG3729	General stress protein
ILQ59_RS16135	COG3685	Protein conserved in bacteria
ILQ59_RS16140	COG3685	Protein conserved in bacteria
ILQ59_RS16145	COG3546	catalase activity
ILQ59_RS16150	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
ILQ59_RS16155	COG5301	cellulose 1,4-beta-cellobiosidase activity
ILQ59_RS16190	COG1196	nuclear chromosome segregation
ILQ59_RS16240	COG1030	water channel activity
ILQ59_RS16260	COG4220	transposase activity
ILQ59_RS16275	COG5562	phage envelope protein
ILQ59_RS16310	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
ILQ59_RS16330	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
ILQ59_RS16340	COG2076	Multidrug Resistance protein
ILQ59_RS16365	COG0582	viral genome integration into host DNA
ILQ59_RS16370	COG0538	isocitrate dehydrogenase activity
ILQ59_RS16375	COG1187	pseudouridine synthase activity
ILQ59_RS16385	COG0482	sulfurtransferase activity
ILQ59_RS16395	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ILQ59_RS16400	COG0745	RESPONSE REGULATOR receiver
ILQ59_RS16405	COG2205	protein histidine kinase activity
ILQ59_RS16415	COG4220	transposase activity
ILQ59_RS16505	COG2850	peptidyl-arginine hydroxylation
ILQ59_RS16515	COG3842	ATPase activity
ILQ59_RS16705	COG3772	lysozyme
ILQ59_RS16745	COG0484	heat shock protein binding
ILQ59_RS16750	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
ILQ59_RS16755	COG1403	HNH endonuclease
ILQ59_RS16810	COG1846	Transcriptional regulator
ILQ59_RS16830	COG4197	protein conserved in bacteria, prophage-related
ILQ59_RS16860	COG0582	viral genome integration into host DNA
ILQ59_RS16865	COG1177	transmembrane transport
ILQ59_RS16870	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
ILQ59_RS16875	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
ILQ59_RS16885	COG4591	ABC-type transport system involved in lipoprotein release permease component
ILQ59_RS16890	COG1136	(ABC) transporter
ILQ59_RS16895	COG4591	ABC-type transport system involved in lipoprotein release permease component
ILQ59_RS16900	COG4763	Acyl-transferase
ILQ59_RS16905	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ILQ59_RS16910	COG1388	LysM domain
ILQ59_RS16910	COG1376	ErfK ybiS ycfS ynhG family protein
ILQ59_RS16920	COG1309	transcriptional regulator
ILQ59_RS16925	COG3134	Outer membrane lipoprotein
ILQ59_RS16930	COG1252	NADH dehydrogenase
ILQ59_RS16945	COG0510	thiamine kinase activity
ILQ59_RS16950	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
ILQ59_RS16955	COG5633	Lipoprotein
ILQ59_RS16960	COG0537	adenosine 5'-monophosphoramidase activity
ILQ59_RS16970	COG4773	Receptor
ILQ59_RS16975	COG1263	PTS System
ILQ59_RS16975	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ILQ59_RS16980	COG0084	hydrolase, TatD family'
ILQ59_RS16985	COG0470	DNA polymerase III
ILQ59_RS16995	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ILQ59_RS17000	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ILQ59_RS17005	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ILQ59_RS17015	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ59_RS17020	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
ILQ59_RS17040	COG1399	metal-binding, possibly nucleic acid-binding protein
ILQ59_RS17045	COG0424	maF-like protein
ILQ59_RS17050	COG0564	pseudouridine synthase activity
ILQ59_RS17055	COG1530	ribonuclease E activity
ILQ59_RS17060	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
ILQ59_RS17065	COG1256	bacterial-type flagellum assembly
ILQ59_RS17070	COG1705	Flagellar rod assembly protein muramidase FlgJ
ILQ59_RS17070	COG3951	Flagellar rod assembly protein muramidase FlgJ
ILQ59_RS17085	COG4786	Flagellar basal body rod
ILQ59_RS17090	COG4787	bacterial-type flagellum-dependent cell motility
ILQ59_RS17095	COG1749	Flagellar hook protein flgE
ILQ59_RS17100	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
ILQ59_RS17105	COG1558	bacterial-type flagellum-dependent cell motility
ILQ59_RS17110	COG1815	bacterial-type flagellum-dependent cell motility
ILQ59_RS17115	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
ILQ59_RS17120	COG2747	anti-sigma28 factor FlgM
ILQ59_RS17125	COG3418	PFAM FlgN family protein
ILQ59_RS17130	COG0728	peptidoglycan biosynthetic process
ILQ59_RS17135	COG0673	inositol 2-dehydrogenase activity
ILQ59_RS17145	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ILQ59_RS17155	COG2999	glutathione oxidoreductase activity
ILQ59_RS17190	COG3038	cytochrome b561
ILQ59_RS17195	COG2353	YceI-like domain
ILQ59_RS17205	COG1560	Kdo2-lipid A biosynthetic process
ILQ59_RS17220	COG5645	(Lipo)protein
ILQ59_RS17225	COG2943	transferase activity, transferring hexosyl groups
ILQ59_RS17240	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ILQ59_RS17245	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
ILQ59_RS17270	COG2197	response regulator
ILQ59_RS17285	COG1462	curli production assembly transport component CsgG
ILQ59_RS17295	COG3381	protein complex oligomerization
ILQ59_RS17345	COG2003	Belongs to the UPF0758 family
ILQ59_RS17375	COG3468	outer membrane autotransporter barrel domain protein
ILQ59_RS17415	COG1475	DNA binding
ILQ59_RS17420	COG3969	phosphoadenosine phosphosulfate
ILQ59_RS17425	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
ILQ59_RS17435	COG2831	hemolysin activation secretion protein
ILQ59_RS17520	COG4771	TonB-dependent receptor
ILQ59_RS17580	COG1358	cellular component organization or biogenesis
ILQ59_RS17615	COG4372	Transposase
ILQ59_RS17620	COG3436	PFAM IS66 Orf2 family protein
ILQ59_RS17650	COG0254	rRNA binding
ILQ59_RS17695	COG0829	nickel cation binding
ILQ59_RS17705	COG2194	sulfuric ester hydrolase activity
ILQ59_RS17710	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
ILQ59_RS17745	COG3436	PFAM IS66 Orf2 family protein
ILQ59_RS17750	COG4372	Transposase
ILQ59_RS17775	COG4983	Phage plasmid primase, P4 family domain protein
ILQ59_RS17800	COG0582	viral genome integration into host DNA
ILQ59_RS17850	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ILQ59_RS17855	COG0404	The glycine cleavage system catalyzes the degradation of glycine
ILQ59_RS17865	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ILQ59_RS17875	COG0736	holo-[acyl-carrier-protein] synthase activity
ILQ59_RS17880	COG2831	hemolysin activation secretion protein
ILQ59_RS17885	COG3210	domain, Protein
ILQ59_RS17895	COG3539	Fimbrial protein
ILQ59_RS17905	COG3188	usher protein
ILQ59_RS17915	COG3121	Chaperone
ILQ59_RS17920	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ59_RS17925	COG3710	Transcriptional regulator
ILQ59_RS17935	COG2200	EAL domain
ILQ59_RS17940	COG3706	GGDEF domain
ILQ59_RS17945	COG0457	Tetratricopeptide repeat
ILQ59_RS17950	COG0726	polysaccharide deacetylase
ILQ59_RS17950	COG1649	PFAM Uncharacterised BCR, COG1649
ILQ59_RS17955	COG1215	transferase activity, transferring glycosyl groups
ILQ59_RS17960	COG3658	cytochrome
ILQ59_RS17965	COG1702	phosphate starvation-inducible protein PhoH
ILQ59_RS17970	COG2837	iron assimilation
ILQ59_RS17975	COG2822	iron ion transport
ILQ59_RS17990	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ILQ59_RS18000	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ILQ59_RS18000	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ILQ59_RS18000	COG0506	proline dehydrogenase activity
ILQ59_RS18005	COG1309	transcriptional regulator
ILQ59_RS18040	COG2233	PERMEase
ILQ59_RS18045	COG3729	General stress protein
ILQ59_RS18085	COG0243	molybdopterin cofactor binding
ILQ59_RS18090	COG3005	denitrification pathway
ILQ59_RS18095	COG0745	RESPONSE REGULATOR receiver
ILQ59_RS18100	COG1879	ABC-type sugar transport system periplasmic component
ILQ59_RS18105	COG2198	Histidine kinase
ILQ59_RS18105	COG2205	protein histidine kinase activity
ILQ59_RS18105	COG0784	Response regulator, receiver
ILQ59_RS18110	COG0348	domain, Protein
ILQ59_RS18130	COG1278	Cold shock
ILQ59_RS18135	COG1278	Cold shock
ILQ59_RS18155	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ILQ59_RS18160	COG1596	polysaccharide export
ILQ59_RS18165	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ILQ59_RS18170	COG3206	protein involved in exopolysaccharide biosynthesis
ILQ59_RS18170	COG0489	protein tyrosine kinase activity
ILQ59_RS18185	COG1294	oxidase, subunit
ILQ59_RS18190	COG1271	oxidase subunit
ILQ59_RS18195	COG1773	rubredoxin
ILQ59_RS18200	COG1999	signal sequence binding
ILQ59_RS18205	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
ILQ59_RS18210	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
ILQ59_RS18215	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
ILQ59_RS18220	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
ILQ59_RS18240	COG5301	cellulose 1,4-beta-cellobiosidase activity
ILQ59_RS18255	COG2032	superoxide dismutase activity
ILQ59_RS18335	COG4372	Transposase
ILQ59_RS18340	COG3436	PFAM IS66 Orf2 family protein
ILQ59_RS18365	COG3772	lysozyme
ILQ59_RS18405	COG2207	Transcriptional regulator
ILQ59_RS18425	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
ILQ59_RS18430	COG1403	HNH endonuclease
ILQ59_RS18455	COG1846	Transcriptional regulator
ILQ59_RS18460	COG1484	DNA-dependent DNA replication
ILQ59_RS18525	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ILQ59_RS18540	COG0670	Belongs to the BI1 family
ILQ59_RS18545	COG2920	part of a sulfur-relay system
ILQ59_RS18550	COG1254	Belongs to the acylphosphatase family
ILQ59_RS18565	COG1832	CoA-binding protein
ILQ59_RS18580	COG0210	DNA helicase
ILQ59_RS18585	COG3304	Inner membrane component domain
ILQ59_RS18590	COG1289	transmembrane transporter activity
ILQ59_RS18595	COG3070	regulator of competence-specific genes
ILQ59_RS18605	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ILQ59_RS18605	COG2885	chlorophyll binding
ILQ59_RS18615	COG1067	ATP-dependent peptidase activity
ILQ59_RS18625	COG3130	regulation of translation
ILQ59_RS18630	COG3009	Protein conserved in bacteria
ILQ59_RS18635	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ILQ59_RS18635	COG3008	intermembrane lipid transfer
ILQ59_RS18640	COG2995	paraquat-inducible protein a
ILQ59_RS18645	COG0488	(ABC) transporter
ILQ59_RS18655	COG3217	Mosc domain protein beta barrel domain protein
ILQ59_RS18655	COG0633	Ferredoxin
ILQ59_RS18675	COG3539	Fimbrial protein
ILQ59_RS18680	COG3539	Fimbrial protein
ILQ59_RS18685	COG3539	Fimbrial protein
ILQ59_RS18695	COG3121	Chaperone
ILQ59_RS18700	COG3539	Fimbrial protein
ILQ59_RS18705	COG0431	NADPH-dependent FMN reductase
ILQ59_RS18710	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ILQ59_RS18720	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ILQ59_RS18725	COG1116	anion transmembrane transporter activity
ILQ59_RS18730	COG0308	aminopeptidase N
ILQ59_RS18740	COG0017	Asparaginyl-tRNA synthetase
ILQ59_RS18750	COG1448	Aminotransferase
ILQ59_RS18755	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ILQ59_RS18760	COG3108	Peptidase M15
ILQ59_RS18765	COG2989	Protein conserved in bacteria
ILQ59_RS18775	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
ILQ59_RS18785	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ILQ59_RS18790	COG1434	Gram-negative-bacterium-type cell wall biogenesis
ILQ59_RS18795	COG3173	Aminoglycoside phosphotransferase
ILQ59_RS18810	COG3214	Protein conserved in bacteria
ILQ59_RS18820	COG1132	(ABC) transporter
ILQ59_RS18825	COG0658	competence protein
ILQ59_RS18825	COG2333	competence protein COMEC
ILQ59_RS18835	COG0539	negative regulation of cytoplasmic translation
ILQ59_RS18845	COG0501	Belongs to the peptidase M48B family
ILQ59_RS18860	COG2323	membrane
ILQ59_RS18865	COG1944	ATP diphosphatase activity
ILQ59_RS18870	COG2116	formate transmembrane transporter activity
ILQ59_RS18875	COG1882	Formate acetyltransferase
ILQ59_RS18880	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
ILQ59_RS18890	COG0531	amino acid
ILQ59_RS18900	COG1335	isochorismatase
ILQ59_RS18905	COG3302	dmso reductase anchor subunit
ILQ59_RS18910	COG0437	4 iron, 4 sulfur cluster binding
ILQ59_RS18915	COG0243	molybdopterin cofactor binding
ILQ59_RS18925	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ILQ59_RS18935	COG1178	ABC-type Fe3 transport system permease component
ILQ59_RS18935	COG1674	ftsk spoiiie
ILQ59_RS18940	COG1522	sequence-specific DNA binding
ILQ59_RS18945	COG0492	ferredoxin-NADP+ reductase activity
ILQ59_RS18950	COG4988	ABC transporter
ILQ59_RS18955	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
ILQ59_RS18975	COG0542	response to heat
ILQ59_RS18985	COG1278	Cold shock
ILQ59_RS18990	COG0577	efflux transmembrane transporter activity
ILQ59_RS18990	COG1136	(ABC) transporter
ILQ59_RS18995	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ILQ59_RS19000	COG2990	Protein conserved in bacteria
ILQ59_RS19005	COG3593	DNA synthesis involved in DNA repair
ILQ59_RS19010	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
ILQ59_RS19015	COG2431	L-lysine efflux transmembrane transporter activity
ILQ59_RS19025	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ILQ59_RS19030	COG0028	Belongs to the TPP enzyme family
ILQ59_RS19035	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
ILQ59_RS19040	COG0702	epimerase
ILQ59_RS19045	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ILQ59_RS19050	COG3023	N-Acetylmuramoyl-L-alanine amidase
ILQ59_RS19070	COG1126	abc transporter atp-binding protein
ILQ59_RS19075	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ILQ59_RS19080	COG4215	(ABC) transporter
ILQ59_RS19085	COG4160	amino acid transport
ILQ59_RS19090	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ILQ59_RS19120	COG1177	transmembrane transport
ILQ59_RS19125	COG1176	ABC-type spermidine putrescine transport system, permease component I
ILQ59_RS19130	COG3842	ATPase activity
ILQ59_RS19135	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
ILQ59_RS19150	COG0778	Nitroreductase
ILQ59_RS19160	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
ILQ59_RS19175	COG3226	Transcriptional regulator
ILQ59_RS19180	COG0738	Major facilitator superfamily
ILQ59_RS19185	COG0561	phosphatase activity
ILQ59_RS19195	COG2814	Major facilitator Superfamily
ILQ59_RS19200	COG0671	phosphoesterase, PA-phosphatase related
ILQ59_RS19205	COG1349	DNA-binding transcription factor activity
ILQ59_RS19210	COG1686	Belongs to the peptidase S11 family
ILQ59_RS19215	COG0625	glutathione transferase activity
ILQ59_RS19220	COG2133	pyrroloquinoline quinone binding
ILQ59_RS19245	COG2199	diguanylate cyclase activity
ILQ59_RS19250	COG2200	EAL domain
ILQ59_RS19260	COG0601	transmembrane transport
ILQ59_RS19265	COG0747	negative chemotaxis
ILQ59_RS19270	COG4172	Belongs to the ABC transporter superfamily
ILQ59_RS19280	COG0303	'Molybdopterin
ILQ59_RS19285	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
ILQ59_RS19290	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ILQ59_RS19295	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
ILQ59_RS19305	COG0561	phosphatase activity
ILQ59_RS19315	COG0488	(ABC) transporter
ILQ59_RS19320	COG1376	ErfK ybiS ycfS ynhG family protein
ILQ59_RS19325	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
ILQ59_RS19330	COG1321	iron dependent repressor
ILQ59_RS19340	COG2194	sulfuric ester hydrolase activity
ILQ59_RS19345	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ILQ59_RS19355	COG5006	permease, DMT superfamily
ILQ59_RS19365	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ILQ59_RS19370	COG0765	amino acid transport
ILQ59_RS19375	COG1126	abc transporter atp-binding protein
ILQ59_RS19380	COG0668	transmembrane transport
ILQ59_RS19395	COG4774	siderophore transport
ILQ59_RS19405	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
ILQ59_RS19415	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
ILQ59_RS19420	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ILQ59_RS19425	COG1199	ATP-dependent helicase activity
ILQ59_RS19435	COG0513	Belongs to the DEAD box helicase family
ILQ59_RS19440	COG1309	transcriptional regulator
ILQ59_RS19450	COG1131	(ABC) transporter
ILQ59_RS19455	COG0842	Transport permease protein
ILQ59_RS19460	COG0842	Transport permease protein
ILQ59_RS19470	COG3568	Endonuclease Exonuclease Phosphatase
ILQ59_RS19475	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ILQ59_RS19480	COG0392	lysyltransferase activity
ILQ59_RS19485	COG0670	Belongs to the BI1 family
ILQ59_RS19490	COG0670	Belongs to the BI1 family
ILQ59_RS19495	COG0314	molybdopterin synthase activity
ILQ59_RS19500	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
ILQ59_RS19510	COG0521	Mo-molybdopterin cofactor biosynthetic process
ILQ59_RS19520	COG0391	Required for morphogenesis under gluconeogenic growth conditions
ILQ59_RS19530	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
ILQ59_RS19535	COG2226	methyltransferase
ILQ59_RS19550	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
ILQ59_RS19555	COG1881	PFAM PEBP family protein
ILQ59_RS19595	COG5301	cellulose 1,4-beta-cellobiosidase activity
ILQ59_RS19670	COG0740	serine-type endopeptidase activity
ILQ59_RS19710	COG3772	lysozyme
ILQ59_RS19830	COG0582	viral genome integration into host DNA
ILQ59_RS19835	COG4677	pectinesterase activity
ILQ59_RS19840	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ILQ59_RS19845	COG0471	metal ion transport
ILQ59_RS19855	COG2828	Protein conserved in bacteria
ILQ59_RS19860	COG0583	DNA-binding transcription factor activity
ILQ59_RS19870	COG0561	phosphatase activity
ILQ59_RS19880	COG4149	molybdate abc transporter
ILQ59_RS19885	COG0725	ABC transporter, periplasmic molybdate-binding protein
ILQ59_RS19895	COG2005	Transcriptional regulator
ILQ59_RS19895	COG3585	molybdate ion transport
ILQ59_RS19900	COG1119	ATPase activity
ILQ59_RS19905	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ILQ59_RS19910	COG1085	galactose-1-phosphate uridylyltransferase
ILQ59_RS19920	COG2017	converts alpha-aldose to the beta-anomer
ILQ59_RS19930	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ILQ59_RS19940	COG1230	cation diffusion facilitator family transporter
ILQ59_RS19945	COG3201	nicotinamide mononucleotide transporter
ILQ59_RS19950	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
ILQ59_RS19985	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
ILQ59_RS19990	COG2885	chlorophyll binding
ILQ59_RS20000	COG3064	Membrane
ILQ59_RS20005	COG0848	biopolymer transport protein
ILQ59_RS20010	COG0811	peptide transport
ILQ59_RS20015	COG0824	Thioesterase
ILQ59_RS20020	COG3790	cyd operon protein YbgE
ILQ59_RS20025	COG4890	Cyd operon protein YbgT
ILQ59_RS20030	COG1294	oxidase, subunit
ILQ59_RS20035	COG1271	oxidase subunit
ILQ59_RS20050	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
ILQ59_RS20060	COG4865	methylaspartate mutase activity
ILQ59_RS20065	COG3799	methylaspartate ammonia-lyase activity
ILQ59_RS20080	COG1301	dicarboxylic acid transport
ILQ59_RS20085	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
ILQ59_RS20085	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
ILQ59_RS20090	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
ILQ59_RS20095	COG0583	DNA-binding transcription factor activity
ILQ59_RS20100	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
ILQ59_RS20110	COG0508	dehydrogenase complex catalyzes the overall conversion of
ILQ59_RS20115	COG0567	Dehydrogenase, E1 component
ILQ59_RS20120	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ILQ59_RS20125	COG1053	succinate dehydrogenase
ILQ59_RS20130	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
ILQ59_RS20135	COG2009	succinate dehydrogenase
ILQ59_RS20145	COG0372	Belongs to the citrate synthase family
ILQ59_RS20150	COG3539	Fimbrial protein
ILQ59_RS20155	COG3188	usher protein
ILQ59_RS20160	COG3121	Chaperone
ILQ59_RS20165	COG3539	Fimbrial protein
ILQ59_RS20170	COG3180	Ammonia monooxygenase
ILQ59_RS20175	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
ILQ59_RS20185	COG1984	allophanate hydrolase subunit 2
ILQ59_RS20190	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
ILQ59_RS20195	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ILQ59_RS20200	COG3104	oligopeptide transport
ILQ59_RS20205	COG0415	Belongs to the DNA photolyase family
ILQ59_RS20210	COG3272	Protein of unknown function (DUF1722)
ILQ59_RS20230	COG3209	COG3209 Rhs family protein
ILQ59_RS20260	COG2205	protein histidine kinase activity
ILQ59_RS20265	COG0745	RESPONSE REGULATOR receiver
ILQ59_RS20275	COG1982	Orn Lys Arg decarboxylase major
ILQ59_RS20280	COG0531	amino acid
ILQ59_RS20285	COG0033	Phosphoglucomutase
ILQ59_RS20290	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
ILQ59_RS20295	COG0596	Alpha beta hydrolase
ILQ59_RS20305	COG0716	FMN binding
ILQ59_RS20315	COG0735	belongs to the Fur family
ILQ59_RS20335	COG2190	(PTS) system
ILQ59_RS20335	COG1263	PTS System
ILQ59_RS20335	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ILQ59_RS20345	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
ILQ59_RS20350	COG1846	Transcriptional regulator
ILQ59_RS20350	COG1940	carbohydrate kinase activity
ILQ59_RS20355	COG0647	UMP catabolic process
ILQ59_RS20360	COG0367	asparagine synthase
ILQ59_RS20400	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ILQ59_RS20410	COG1702	phosphate starvation-inducible protein PhoH
ILQ59_RS20420	COG4535	Mg2 and Co2 transporter CorC
ILQ59_RS20425	COG0815	Transfers the fatty acyl group on membrane lipoproteins
ILQ59_RS20430	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ILQ59_RS20435	COG0765	amino acid transport
ILQ59_RS20440	COG0765	amino acid transport
ILQ59_RS20445	COG1126	abc transporter atp-binding protein
ILQ59_RS20455	COG0443	Heat shock 70 kDa protein
ILQ59_RS20470	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
ILQ59_RS20475	COG2214	Heat shock protein DnaJ domain protein
ILQ59_RS20490	COG2888	peptidyl-tyrosine sulfation
ILQ59_RS20505	COG1466	dna polymerase III delta subunit
ILQ59_RS20515	COG0406	alpha-ribazole phosphatase activity
ILQ59_RS20520	COG0799	negative regulation of ribosome biogenesis
ILQ59_RS20530	COG0768	penicillin binding
ILQ59_RS20535	COG0772	Belongs to the SEDS family
ILQ59_RS20540	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ILQ59_RS20545	COG1686	Belongs to the peptidase S11 family
ILQ59_RS20560	COG0583	DNA-binding transcription factor activity
ILQ59_RS20570	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ILQ59_RS20575	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ILQ59_RS20595	COG3069	C4-dicarboxylate transmembrane transporter activity
ILQ59_RS20600	COG4565	transcriptional regulatory protein
ILQ59_RS20605	COG3290	protein histidine kinase activity
ILQ59_RS20610	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
ILQ59_RS20620	COG2301	Belongs to the HpcH HpaI aldolase family
ILQ59_RS20625	COG3051	citrate lyase alpha subunit
ILQ59_RS20635	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
ILQ59_RS20640	COG0471	metal ion transport
ILQ59_RS20645	COG3719	Belongs to the RNase T2 family
ILQ59_RS20650	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ILQ59_RS20655	COG1063	alcohol dehydrogenase
ILQ59_RS20660	COG0589	response to stress
ILQ59_RS20665	COG3634	alkyl hydroperoxide reductase activity
ILQ59_RS20670	COG0450	alkyl hydroperoxide reductase
ILQ59_RS20675	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ILQ59_RS20680	COG0583	DNA-binding transcription factor activity
ILQ59_RS20685	COG3969	phosphoadenosine phosphosulfate
ILQ59_RS20690	COG1475	DNA binding
ILQ59_RS20695	COG0436	Aminotransferase
ILQ59_RS20700	COG0371	Dehydrogenase
ILQ59_RS20705	COG2879	small protein
ILQ59_RS20710	COG1966	Carbon starvation protein
ILQ59_RS20720	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ59_RS20725	COG3433	isochorismatase activity
ILQ59_RS20725	COG1535	isochorismatase
ILQ59_RS20730	COG1021	2,3-dihydroxybenzoate-AMP ligase
ILQ59_RS20735	COG1169	isochorismate synthase
ILQ59_RS20740	COG4592	Periplasmic binding protein
ILQ59_RS20750	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ILQ59_RS20755	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ILQ59_RS20760	COG1120	ATPase activity
ILQ59_RS20765	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
ILQ59_RS20770	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ILQ59_RS20770	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
ILQ59_RS20775	COG3251	PFAM MbtH domain protein
ILQ59_RS20780	COG2382	esterase
ILQ59_RS20785	COG4771	TonB-dependent receptor
ILQ59_RS20790	COG2977	Belongs to the P-Pant transferase superfamily
ILQ59_RS20815	COG2315	Protein conserved in bacteria
ILQ59_RS20820	COG0778	Nitroreductase
ILQ59_RS20825	COG0668	transmembrane transport
ILQ59_RS20830	COG1113	amino acid transport
ILQ59_RS20835	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ILQ59_RS20840	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ILQ59_RS20845	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ILQ59_RS20850	COG1538	Outer membrane efflux protein
ILQ59_RS20855	COG0745	RESPONSE REGULATOR receiver
ILQ59_RS20860	COG5002	protein histidine kinase activity
ILQ59_RS20875	COG3209	COG3209 Rhs family protein
ILQ59_RS20875	COG4104	PAAR repeat-containing protein
ILQ59_RS20885	COG4104	PAAR repeat-containing protein
ILQ59_RS20885	COG3209	COG3209 Rhs family protein
ILQ59_RS20895	COG5433	transposase activity
ILQ59_RS20900	COG1215	transferase activity, transferring glycosyl groups
ILQ59_RS20905	COG4783	chaperone-mediated protein folding
ILQ59_RS20915	COG2207	Transcriptional regulator
ILQ59_RS20925	COG2197	response regulator
ILQ59_RS20930	COG3539	Fimbrial protein
ILQ59_RS20935	COG3539	Fimbrial protein
ILQ59_RS20940	COG3188	usher protein
ILQ59_RS20945	COG3121	Chaperone
ILQ59_RS20950	COG3539	Fimbrial protein
ILQ59_RS20960	COG2501	S4 domain
ILQ59_RS20965	COG1988	membrane-bound metal-dependent
ILQ59_RS20975	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ILQ59_RS20985	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
ILQ59_RS20990	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
ILQ59_RS20995	COG0549	Belongs to the carbamate kinase family
ILQ59_RS21005	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
ILQ59_RS21010	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
ILQ59_RS21015	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
ILQ59_RS21020	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ILQ59_RS21025	COG3257	ureidoglycine aminohydrolase activity
ILQ59_RS21030	COG1929	Belongs to the glycerate kinase type-1 family
ILQ59_RS21035	COG2233	PERMEase
ILQ59_RS21045	COG1953	Uracil, thiamine, allantoin
ILQ59_RS21050	COG2084	Dehydrogenase
ILQ59_RS21055	COG3622	Belongs to the hyi family
ILQ59_RS21060	COG3960	tartronate-semialdehyde synthase activity
ILQ59_RS21065	COG1414	Transcriptional regulator
ILQ59_RS21075	COG0583	DNA-binding transcription factor activity
ILQ59_RS21095	COG3209	COG3209 Rhs family protein
ILQ59_RS21100	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
ILQ59_RS21105	COG4181	ATPase activity
ILQ59_RS21110	COG2755	lipolytic protein G-D-S-L family
ILQ59_RS21115	COG0300	oxidoreductase activity
ILQ59_RS21120	COG3118	belongs to the thioredoxin family
ILQ59_RS21125	COG0390	transport system, permease component
ILQ59_RS21130	COG4619	ABC transporter
ILQ59_RS21135	COG0330	HflC and HflK could
ILQ59_RS21140	COG1585	Membrane protein implicated in regulation of membrane protease activity
ILQ59_RS21160	COG0789	Transcriptional regulator
ILQ59_RS21195	COG0531	amino acid
ILQ59_RS21200	COG2066	Belongs to the glutaminase family
ILQ59_RS21205	COG2217	Heavy metal translocating P-type atpase
ILQ59_RS21210	COG3093	addiction module antidote protein HigA
ILQ59_RS21215	COG3735	TraB family
ILQ59_RS21220	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ILQ59_RS21225	COG0737	Belongs to the 5'-nucleotidase family
ILQ59_RS21230	COG2223	nitrite transmembrane transporter activity
ILQ59_RS21235	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ILQ59_RS21235	COG4651	solute:proton antiporter activity
ILQ59_RS21240	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ILQ59_RS21275	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ILQ59_RS21285	COG2832	Protein of unknown function (DUF454)
ILQ59_RS21290	COG3923	Primosomal replication protein n
ILQ59_RS21300	COG3264	Mechanosensitive ion channel
ILQ59_RS21300	COG1196	nuclear chromosome segregation
ILQ59_RS21305	COG1309	transcriptional regulator
ILQ59_RS21310	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ILQ59_RS21315	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ILQ59_RS21330	COG0110	maltose O-acetyltransferase activity
ILQ59_RS21340	COG4943	cyclic-guanylate-specific phosphodiesterase activity
ILQ59_RS21345	COG5507	3-demethylubiquinone-9 3-methyltransferase
ILQ59_RS21355	COG3695	enzyme binding
ILQ59_RS21360	COG3126	Type III secretion system lipoprotein chaperone (YscW)
ILQ59_RS21365	COG1946	Acyl-CoA thioesterase
ILQ59_RS21370	COG0004	ammonium transporteR
ILQ59_RS21375	COG0347	Belongs to the P(II) protein family
ILQ59_RS21380	COG1132	(ABC) transporter
ILQ59_RS21385	COG1132	(ABC) transporter
ILQ59_RS21390	COG1522	sequence-specific DNA binding
ILQ59_RS21400	COG4533	DNA binding
ILQ59_RS21410	COG0824	Thioesterase
ILQ59_RS21415	COG1555	photosystem II stabilization
ILQ59_RS21420	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ILQ59_RS21425	COG0776	regulation of translation
ILQ59_RS21430	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
ILQ59_RS21450	COG0271	Belongs to the BolA IbaG family
ILQ59_RS21455	COG3056	Lipoprotein
ILQ59_RS21460	COG2223	nitrite transmembrane transporter activity
ILQ59_RS21465	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
ILQ59_RS21470	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ILQ59_RS21475	COG1845	cytochrome c oxidase, subunit III
ILQ59_RS21480	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ILQ59_RS21490	COG2814	Major facilitator Superfamily
ILQ59_RS21500	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
ILQ59_RS21505	COG0693	protein deglycase activity
ILQ59_RS21520	COG0142	geranyltranstransferase activity
ILQ59_RS21530	COG0667	Aldo Keto reductase
ILQ59_RS21540	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
ILQ59_RS21545	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
ILQ59_RS21560	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ILQ59_RS21560	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ILQ59_RS21570	COG4238	major outer membrane lipoprotein
ILQ59_RS21575	COG3248	Nucleoside-binding outer membrane protein
ILQ59_RS21580	COG1403	HNH endonuclease
ILQ59_RS21590	COG3609	addiction module antidote protein, CC2985 family
ILQ59_RS21595	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ILQ59_RS21600	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ILQ59_RS21605	COG1862	Preprotein translocase
ILQ59_RS21630	COG0366	Alpha amylase catalytic
ILQ59_RS21635	COG1113	amino acid transport
ILQ59_RS21640	COG1114	Component of the transport system for branched-chain amino acids
ILQ59_RS21645	COG5002	protein histidine kinase activity
ILQ59_RS21650	COG0745	RESPONSE REGULATOR receiver
ILQ59_RS21655	COG0420	3'-5' exonuclease activity
ILQ59_RS21660	COG0419	ATPase involved in DNA repair
ILQ59_RS21665	COG2814	Major facilitator Superfamily
ILQ59_RS21670	COG1940	carbohydrate kinase activity
ILQ59_RS21695	COG4126	flavin adenine dinucleotide binding
ILQ59_RS21715	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
ILQ59_RS21720	COG3706	GGDEF domain
ILQ59_RS21730	COG1785	Belongs to the alkaline phosphatase family
ILQ59_RS21745	COG1181	Belongs to the D-alanine--D-alanine ligase family
ILQ59_RS21765	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
ILQ59_RS21770	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ILQ59_RS21775	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ILQ59_RS21780	COG3468	outer membrane autotransporter barrel domain protein
ILQ59_RS21785	COG0113	porphobilinogen synthase activity
ILQ59_RS21790	COG2175	clavaminate synthase activity
ILQ59_RS21795	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ILQ59_RS21800	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
ILQ59_RS21805	COG4521	taurine ABC transporter
ILQ59_RS21820	COG2271	Major facilitator Superfamily
ILQ59_RS21825	COG1840	ABC-type Fe3 transport system, periplasmic component
ILQ59_RS21835	COG3842	ATPase activity
ILQ59_RS21850	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
ILQ59_RS21855	COG3122	Protein conserved in bacteria
ILQ59_RS21860	COG2814	Major facilitator Superfamily
ILQ59_RS21865	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ILQ59_RS21880	COG0596	Alpha beta hydrolase
ILQ59_RS21895	COG1414	Transcriptional regulator
ILQ59_RS21900	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
ILQ59_RS21910	COG1609	Transcriptional regulator
ILQ59_RS21915	COG3250	beta-galactosidase activity
ILQ59_RS21920	COG2223	nitrite transmembrane transporter activity
ILQ59_RS21925	COG0110	maltose O-acetyltransferase activity
ILQ59_RS21930	COG2807	transmembrane transport
ILQ59_RS21940	COG0288	reversible hydration of carbon dioxide
ILQ59_RS21945	COG0583	DNA-binding transcription factor activity
ILQ59_RS21950	COG0402	S-adenosylhomocysteine deaminase activity
ILQ59_RS21955	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
ILQ59_RS21960	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ILQ59_RS21965	COG2079	MmgE PrpD family protein
ILQ59_RS21970	COG0372	Belongs to the citrate synthase family
ILQ59_RS21975	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
ILQ59_RS21980	COG3829	transcription factor binding
ILQ59_RS21990	COG1280	lysine exporter protein (LysE YggA)
ILQ59_RS22005	COG1064	alcohol dehydrogenase
ILQ59_RS22015	COG1172	Belongs to the binding-protein-dependent transport system permease family
ILQ59_RS22025	COG1879	ABC-type sugar transport system periplasmic component
ILQ59_RS22035	COG0402	S-adenosylhomocysteine deaminase activity
ILQ59_RS22040	COG0549	Belongs to the carbamate kinase family
ILQ59_RS22050	COG1304	FMN binding
ILQ59_RS22055	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
ILQ59_RS22065	COG0666	response to abiotic stimulus
ILQ59_RS22080	COG2200	EAL domain
ILQ59_RS22080	COG2771	luxR family
ILQ59_RS22090	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ILQ59_RS22145	COG1556	Lactate utilization protein
ILQ59_RS22150	COG1139	Iron-sulfur cluster binding protein
ILQ59_RS22155	COG0247	lactate metabolic process
ILQ59_RS22160	COG2207	Transcriptional regulator
ILQ59_RS22165	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ILQ59_RS22175	COG3059	membrane
ILQ59_RS22180	COG0656	L-ascorbic acid biosynthetic process
ILQ59_RS22185	COG2207	Transcriptional regulator
ILQ59_RS22185	COG3708	Transcriptional regulator
ILQ59_RS22190	COG1388	LysM domain
ILQ59_RS22205	COG0583	DNA-binding transcription factor activity
ILQ59_RS22210	COG1073	alpha beta
ILQ59_RS22215	COG1902	pentaerythritol trinitrate reductase activity
ILQ59_RS22225	COG4372	Transposase
ILQ59_RS22230	COG3436	PFAM IS66 Orf2 family protein
ILQ59_RS22270	COG3188	usher protein
ILQ59_RS22280	COG3121	Chaperone
ILQ59_RS22285	COG0727	PFAM Uncharacterised protein family (UPF0153)
ILQ59_RS22290	COG3477	response to acidic pH
ILQ59_RS22295	COG2080	2 iron, 2 sulfur cluster binding
ILQ59_RS22300	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
ILQ59_RS22305	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ILQ59_RS22310	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
ILQ59_RS22325	COG0583	DNA-binding transcription factor activity
ILQ59_RS22335	COG4221	oxidoreductase activity
ILQ59_RS22340	COG0583	DNA-binding transcription factor activity
ILQ59_RS22420	COG0582	viral genome integration into host DNA
ILQ59_RS22440	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
ILQ59_RS22455	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
ILQ59_RS22525	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
ILQ59_RS22545	COG2195	Cleaves the N-terminal amino acid of tripeptides
ILQ59_RS22560	COG0454	-acetyltransferase
ILQ59_RS22570	COG2161	toxin-antitoxin pair type II binding
ILQ59_RS22575	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ILQ59_RS22595	COG0791	NLP P60 protein
ILQ59_RS22600	COG3077	Addiction module antitoxin, RelB DinJ family
ILQ59_RS22605	COG3041	Addiction module toxin RelE StbE family
ILQ59_RS22610	COG3034	peptidoglycan biosynthetic process
ILQ59_RS22615	COG0121	glutamine amidotransferase
ILQ59_RS22625	COG1960	acyl-CoA dehydrogenase activity
ILQ59_RS22635	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ILQ59_RS22640	COG5433	transposase activity
ILQ59_RS22660	COG5433	transposase activity
ILQ59_RS22680	COG3209	COG3209 Rhs family protein
ILQ59_RS22800	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ILQ59_RS22810	COG2226	methyltransferase
ILQ59_RS22820	COG0741	lytic transglycosylase activity
ILQ59_RS22820	COG1388	LysM domain
ILQ59_RS22825	COG2226	methyltransferase
ILQ59_RS22835	COG0583	DNA-binding transcription factor activity
ILQ59_RS22840	COG0656	L-ascorbic acid biosynthetic process
ILQ59_RS22875	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
ILQ59_RS22880	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ILQ59_RS22885	COG2011	ABC-type metal ion transport system permease component
ILQ59_RS22890	COG1464	Belongs to the NlpA lipoprotein family
ILQ59_RS22900	COG1720	tRNA m6t6A37 methyltransferase activity
ILQ59_RS22910	COG0791	NLP P60 protein
ILQ59_RS22915	COG3015	lipoprotein NlpE involved in copper resistance
ILQ59_RS22920	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
ILQ59_RS22925	COG4681	YaeQ
ILQ59_RS22935	COG4568	rho-dependent transcription termination
ILQ59_RS22940	COG0037	tRNA processing
ILQ59_RS22945	COG0346	lactoylglutathione lyase activity
ILQ59_RS22950	COG1982	Orn Lys Arg decarboxylase major
ILQ59_RS22960	COG0587	DNA-directed DNA polymerase activity
ILQ59_RS22985	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ILQ59_RS22990	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
ILQ59_RS23000	COG0750	zinc metalloprotease
ILQ59_RS23005	COG0575	Belongs to the CDS family
ILQ59_RS23010	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ILQ59_RS23015	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
ILQ59_RS23040	COG0024	Methionine aminopeptidase
ILQ59_RS23060	COG3835	regulator
ILQ59_RS23065	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ILQ59_RS23080	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ILQ59_RS23085	COG2860	membrane
ILQ59_RS23110	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ILQ59_RS23115	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ILQ59_RS23120	COG1120	ATPase activity
ILQ59_RS23125	COG4774	siderophore transport
ILQ59_RS23130	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ILQ59_RS23135	COG1643	Atp-dependent helicase
ILQ59_RS23140	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
ILQ59_RS23150	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
ILQ59_RS23155	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ILQ59_RS23160	COG0617	tRNA 3'-terminal CCA addition
ILQ59_RS23165	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ILQ59_RS23175	COG3121	Chaperone
ILQ59_RS23180	COG3188	usher protein
ILQ59_RS23185	COG3539	Fimbrial protein
ILQ59_RS23190	COG3539	Fimbrial protein
ILQ59_RS23215	COG5464	transposase or invertase
ILQ59_RS23225	COG0726	polysaccharide deacetylase
ILQ59_RS23230	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ59_RS23235	COG0842	Transport permease protein
ILQ59_RS23240	COG1131	(ABC) transporter
ILQ59_RS23245	COG0288	reversible hydration of carbon dioxide
ILQ59_RS23250	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
ILQ59_RS23255	COG4993	Dehydrogenase
ILQ59_RS23260	COG2132	Multicopper oxidase
ILQ59_RS23285	COG1049	propionate catabolic process, 2-methylcitrate cycle
ILQ59_RS23290	COG3064	Membrane
ILQ59_RS23295	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ILQ59_RS23300	COG0508	dehydrogenase complex catalyzes the overall conversion of
ILQ59_RS23305	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
ILQ59_RS23310	COG2186	Transcriptional regulator
ILQ59_RS23315	COG1113	amino acid transport
ILQ59_RS23320	COG3725	Membrane protein required for beta-lactamase induction
ILQ59_RS23325	COG3023	N-Acetylmuramoyl-L-alanine amidase
ILQ59_RS23330	COG0157	Belongs to the NadC ModD family
ILQ59_RS23335	COG4969	Belongs to the N-Me-Phe pilin family
ILQ59_RS23340	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ILQ59_RS23345	COG1459	type II secretion system
ILQ59_RS23360	COG0237	dephospho-CoA kinase activity
ILQ59_RS23375	COG0494	nUDIX hydrolase
ILQ59_RS23395	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ILQ59_RS23400	COG0849	cell division
ILQ59_RS23405	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
ILQ59_RS23410	COG1181	Belongs to the D-alanine--D-alanine ligase family
ILQ59_RS23425	COG0772	Belongs to the SEDS family
ILQ59_RS23430	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
ILQ59_RS23440	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ILQ59_RS23445	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ILQ59_RS23450	COG0768	penicillin binding
ILQ59_RS23455	COG3116	cell division
ILQ59_RS23470	COG1609	Transcriptional regulator
ILQ59_RS23480	COG0440	acetolactate synthase activity
ILQ59_RS23485	COG0028	Belongs to the TPP enzyme family
ILQ59_RS23490	COG0583	DNA-binding transcription factor activity
ILQ59_RS23505	COG0473	3-isopropylmalate dehydrogenase activity
ILQ59_RS23525	COG4533	DNA binding
ILQ59_RS23535	COG4143	(ABC) transporter
ILQ59_RS23540	COG1178	ABC-type Fe3 transport system permease component
ILQ59_RS23545	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
ILQ59_RS23550	COG0586	Pfam SNARE associated Golgi protein
ILQ59_RS23555	COG4977	sequence-specific DNA binding
ILQ59_RS23570	COG0235	Class ii aldolase
ILQ59_RS23575	COG0417	DNA replication proofreading
ILQ59_RS23585	COG0564	pseudouridine synthase activity
ILQ59_RS23595	COG1357	PFAM Pentapeptide repeats (8 copies)
ILQ59_RS23600	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
ILQ59_RS23605	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
ILQ59_RS23610	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ILQ59_RS23645	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
ILQ59_RS23660	COG2271	Major facilitator Superfamily
ILQ59_RS23665	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
ILQ59_RS23670	COG0644	oxidoreductase
ILQ59_RS23705	COG1024	Enoyl-CoA hydratase
ILQ59_RS23720	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
ILQ59_RS23725	COG0505	Belongs to the CarA family
ILQ59_RS23745	COG1047	Peptidyl-prolyl cis-trans
ILQ59_RS23760	COG0196	riboflavin kinase activity
ILQ59_RS23785	COG3121	Chaperone
ILQ59_RS23790	COG3188	usher protein
ILQ59_RS23800	COG0583	DNA-binding transcription factor activity
ILQ59_RS23830	COG4735	regulation of single-species biofilm formation
ILQ59_RS23835	COG1584	GPR1 FUN34 yaaH family protein
ILQ59_RS23840	COG0521	Mo-molybdopterin cofactor biosynthetic process
ILQ59_RS23845	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ILQ59_RS23850	COG1115	amino acid carrier protein
ILQ59_RS23865	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
ILQ59_RS23875	COG0527	aspartate kinase activity
ILQ59_RS23875	COG0460	homoserine dehydrogenase
ILQ59_RS23885	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
ILQ59_RS23895	COG0745	RESPONSE REGULATOR receiver
ILQ59_RS23900	COG4452	Inner membrane protein CreD
ILQ59_RS23905	COG2205	protein histidine kinase activity
ILQ59_RS23910	COG0745	RESPONSE REGULATOR receiver
ILQ59_RS23915	COG3045	CreA protein
ILQ59_RS23920	COG3708	Transcriptional regulator
ILQ59_RS23920	COG2207	Transcriptional regulator
ILQ59_RS23930	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
ILQ59_RS23940	COG0741	lytic transglycosylase activity
ILQ59_RS23945	COG0488	(ABC) transporter
ILQ59_RS23955	COG3172	ATPase kinase involved in NAD metabolism
ILQ59_RS23955	COG1056	cytidyltransferase-related domain
ILQ59_RS23960	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
ILQ59_RS23965	COG0560	Phosphoserine phosphatase
ILQ59_RS23975	COG3726	membrane protein affecting hemolysin expression
ILQ59_RS23975	COG0095	Lipoate-protein ligase
ILQ59_RS24010	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
ILQ59_RS24015	COG0084	hydrolase, TatD family'
ILQ59_RS24020	COG4667	esterase of the alpha-beta hydrolase superfamily
ILQ59_RS24030	COG2823	Periplasmic or secreted lipoprotein
ILQ59_RS24040	COG1011	Hydrolase
ILQ59_RS24045	COG0456	acetyltransferase
ILQ59_RS24050	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
ILQ59_RS24070	COG4114	ferric iron reductase
ILQ59_RS24075	COG2197	response regulator
ILQ59_RS24080	COG2197	response regulator
ILQ59_RS24085	COG2966	Psort location CytoplasmicMembrane, score
ILQ59_RS24100	COG1484	DNA-dependent DNA replication
ILQ59_RS24115	COG1063	alcohol dehydrogenase
ILQ59_RS24120	COG1802	Transcriptional regulator
ILQ59_RS24125	COG2271	Major facilitator Superfamily
ILQ59_RS24130	COG0840	transmembrane signaling receptor activity
ILQ59_RS24140	COG1966	Carbon starvation protein
ILQ59_RS24145	COG2879	small protein
ILQ59_RS24150	COG0523	cobalamin synthesis protein
ILQ59_RS24175	COG0732	type I restriction modification DNA specificity domain
ILQ59_RS24195	COG5457	Domain of unknown function (DUF1127)
ILQ59_RS24200	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ILQ59_RS24215	COG2814	Major facilitator Superfamily
ILQ59_RS24220	COG2733	membrane
ILQ59_RS24225	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
ILQ59_RS24230	COG1924	4 iron, 4 sulfur cluster binding
ILQ59_RS24245	COG3204	pilus organization
ILQ59_RS24250	COG0477	Major facilitator Superfamily
ILQ59_RS24265	COG3366	ferrous iron transmembrane transporter activity
ILQ59_RS24270	COG0700	Nucleoside recognition
ILQ59_RS24275	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
ILQ59_RS24300	COG2186	Transcriptional regulator
ILQ59_RS24305	COG0246	Mannitol dehydrogenase
ILQ59_RS24315	COG2610	gluconate transmembrane transporter activity
ILQ59_RS24320	COG3539	Fimbrial protein
ILQ59_RS24325	COG3539	Fimbrial protein
ILQ59_RS24330	COG3539	Fimbrial protein
ILQ59_RS24345	COG3436	PFAM IS66 Orf2 family protein
ILQ59_RS24350	COG4372	Transposase
ILQ59_RS24355	COG3121	Chaperone
ILQ59_RS24360	COG3539	Fimbrial protein
ILQ59_RS24365	COG3539	Fimbrial protein
ILQ59_RS24370	COG4974	Belongs to the 'phage' integrase family
ILQ59_RS24375	COG0582	viral genome integration into host DNA
ILQ59_RS24380	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
ILQ59_RS24385	COG3055	Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
ILQ59_RS24400	COG0210	DNA helicase
ILQ59_RS24405	COG1111	helicase
ILQ59_RS24405	COG1205	dead DEAH box helicase
ILQ59_RS24415	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
ILQ59_RS24510	COG1064	alcohol dehydrogenase
ILQ59_RS24515	COG0433	COG0433 Predicted ATPase
ILQ59_RS24520	COG0795	lipopolysaccharide-transporting ATPase activity
ILQ59_RS24525	COG0795	lipopolysaccharide-transporting ATPase activity
ILQ59_RS24535	COG2927	DNA polymerase III (CHI subunit)
ILQ59_RS24545	COG4269	membrane
ILQ59_RS24550	COG0456	acetyltransferase
ILQ59_RS24555	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
ILQ59_RS24560	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
ILQ59_RS24570	COG2731	YhcH YjgK YiaL family protein
ILQ59_RS24575	COG1309	transcriptional regulator
ILQ59_RS24580	COG1028	Short-chain dehydrogenase reductase Sdr
ILQ59_RS24585	COG0251	oxidation-reduction process
ILQ59_RS24605	COG0251	oxidation-reduction process
ILQ59_RS24610	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
ILQ59_RS24620	COG1609	Transcriptional regulator
ILQ59_RS24625	COG1263	PTS System
ILQ59_RS24625	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ILQ59_RS24630	COG0366	Alpha amylase catalytic
ILQ59_RS24635	COG1328	CTP reductase activity
ILQ59_RS24640	COG0602	queuosine metabolic process
ILQ59_RS24645	COG3783	Cytochrome b(562)
ILQ59_RS24650	COG0312	modulator of DNA gyrase
ILQ59_RS24660	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ILQ59_RS24670	COG1172	Belongs to the binding-protein-dependent transport system permease family
ILQ59_RS24675	COG1172	Belongs to the binding-protein-dependent transport system permease family
ILQ59_RS24680	COG1129	ABC transporter
ILQ59_RS24685	COG1879	ABC-type sugar transport system periplasmic component
ILQ59_RS24690	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
ILQ59_RS24695	COG2337	Toxic component of a toxin-antitoxin (TA) module
ILQ59_RS24700	COG2336	PFAM SpoVT AbrB
ILQ59_RS24705	COG2105	PFAM AIG2 family protein
ILQ59_RS24710	COG2911	Protein conserved in bacteria
ILQ59_RS24715	COG0729	surface antigen
ILQ59_RS24725	COG1253	flavin adenine dinucleotide binding
ILQ59_RS24735	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
ILQ59_RS24745	COG1218	3'(2'),5'-bisphosphate nucleotidase
ILQ59_RS24750	COG0737	Belongs to the 5'-nucleotidase family
ILQ59_RS24755	COG1733	regulation of RNA biosynthetic process
ILQ59_RS24760	COG0702	epimerase
ILQ59_RS24765	COG0697	spore germination
ILQ59_RS24775	COG1113	amino acid transport
ILQ59_RS24780	COG0545	Peptidyl-prolyl cis-trans isomerase
ILQ59_RS24785	COG3061	Opacity-associated protein A
ILQ59_RS24795	COG0675	Transposase, IS605 OrfB family
ILQ59_RS24820	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
ILQ59_RS24855	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ59_RS24860	COG3414	Phosphotransferase system galactitol-specific IIB component
ILQ59_RS24865	COG3037	sugar-specific permease SgaT UlaA
ILQ59_RS24880	COG1073	alpha beta
ILQ59_RS24885	COG3650	response to hydrogen peroxide
ILQ59_RS24895	COG1960	acyl-CoA dehydrogenase activity
ILQ59_RS24900	COG0754	glutathionylspermidine amidase activity
ILQ59_RS24905	COG5463	Belongs to the UPF0441 family
ILQ59_RS24910	COG3766	membrane
ILQ59_RS24920	COG1842	Phage shock protein A
ILQ59_RS24925	COG3789	protein conserved in bacteria
ILQ59_RS24930	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ILQ59_RS24935	COG0557	exoribonuclease II activity
ILQ59_RS24950	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
ILQ59_RS24955	COG0330	HflC and HflK could
ILQ59_RS24960	COG0330	HflC and HflK could
ILQ59_RS24965	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ILQ59_RS24985	COG0860	N-Acetylmuramoyl-L-alanine amidase
ILQ59_RS24990	COG0802	atpase or kinase
ILQ59_RS24995	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ILQ59_RS24995	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ILQ59_RS25025	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
ILQ59_RS25040	COG1511	domain protein
ILQ59_RS25040	COG3264	Mechanosensitive ion channel
ILQ59_RS25045	COG0531	amino acid
ILQ59_RS25055	COG1053	succinate dehydrogenase
ILQ59_RS25060	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ILQ59_RS25075	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ILQ59_RS25080	COG3040	lipid binding
ILQ59_RS25085	COG2076	Multidrug Resistance protein
ILQ59_RS25090	COG5510	response to toxic substance
ILQ59_RS25095	COG5510	response to toxic substance
ILQ59_RS25105	COG1509	lysine 2,3-aminomutase activity
ILQ59_RS25130	COG0531	amino acid
ILQ59_RS25135	COG3030	protein affecting phage T7 exclusion by the F plasmid
ILQ59_RS25140	COG1027	Aspartate ammonia-lyase
ILQ59_RS25145	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
ILQ59_RS25155	COG4232	protein-disulfide reductase activity
ILQ59_RS25160	COG1309	transcriptional regulator
ILQ59_RS25170	COG3710	Transcriptional regulator
ILQ59_RS25175	COG0531	amino acid
ILQ59_RS25180	COG1982	Orn Lys Arg decarboxylase major
ILQ59_RS25185	COG3104	oligopeptide transport
ILQ59_RS25190	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
ILQ59_RS25205	COG2388	GCN5-related N-acetyl-transferase
ILQ59_RS25210	COG3592	Divergent 4Fe-4S mono-cluster
ILQ59_RS25215	COG3290	protein histidine kinase activity
ILQ59_RS25220	COG4565	transcriptional regulatory protein
ILQ59_RS25225	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
ILQ59_RS25230	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
ILQ59_RS25230	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
ILQ59_RS25235	COG3647	Membrane
ILQ59_RS25240	COG2211	Major facilitator Superfamily
ILQ59_RS25245	COG1486	melibiose metabolic process
ILQ59_RS25250	COG2169	Transcriptional regulator
ILQ59_RS25255	COG1982	Orn Lys Arg decarboxylase major
ILQ59_RS25260	COG2207	Transcriptional regulator
ILQ59_RS25265	COG0531	amino acid
ILQ59_RS25270	COG2194	sulfuric ester hydrolase activity
ILQ59_RS25275	COG0745	RESPONSE REGULATOR receiver
ILQ59_RS25280	COG0642	Histidine kinase
ILQ59_RS25290	COG0477	Major facilitator Superfamily
ILQ59_RS25300	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
ILQ59_RS25305	COG2824	Alkylphosphonate utilization operon protein PhnA
ILQ59_RS25310	COG2764	glyoxalase bleomycin resistance protein dioxygenase
ILQ59_RS25315	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
ILQ59_RS25320	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
ILQ59_RS25325	COG3639	organic phosphonate transmembrane transporter activity
ILQ59_RS25330	COG2188	Transcriptional regulator
ILQ59_RS25335	COG3624	Phosphonate C-P lyase system protein PhnG
ILQ59_RS25340	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
ILQ59_RS25345	COG3626	phosphonate metabolism
ILQ59_RS25350	COG3627	carbon phosphorus lyase activity
ILQ59_RS25355	COG4107	phosphonate C-P lyase system protein PhnK
ILQ59_RS25360	COG4778	phosphonate C-P lyase system protein PhnL
ILQ59_RS25365	COG3454	Phosphonate metabolism
ILQ59_RS25370	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
ILQ59_RS25375	COG0456	acetyltransferase
ILQ59_RS25380	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
ILQ59_RS25395	COG1129	ABC transporter
ILQ59_RS25400	COG1172	Belongs to the binding-protein-dependent transport system permease family
ILQ59_RS25420	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ILQ59_RS25430	COG2015	COG2015, Alkyl sulfatase and related hydrolases
ILQ59_RS25440	COG1566	PFAM secretion protein HlyD family protein
ILQ59_RS25445	COG1289	transmembrane transporter activity
ILQ59_RS25450	COG1538	Outer membrane efflux protein
ILQ59_RS25460	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
ILQ59_RS25465	COG1301	dicarboxylic acid transport
ILQ59_RS25470	COG4235	cytochrome complex assembly
ILQ59_RS25475	COG3088	subunit of a heme lyase
ILQ59_RS25480	COG1138	Cytochrome C-type biogenesis protein
ILQ59_RS25485	COG3301	Polysulphide reductase, NrfD
ILQ59_RS25490	COG0437	4 iron, 4 sulfur cluster binding
ILQ59_RS25495	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
ILQ59_RS25505	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ILQ59_RS25510	COG3162	membrane
ILQ59_RS25520	COG1357	PFAM Pentapeptide repeats (8 copies)
ILQ59_RS25525	COG0025	NhaP-type Na H and K H
ILQ59_RS25530	COG2252	PERMEase
ILQ59_RS25535	COG0789	Transcriptional regulator
ILQ59_RS25540	COG2207	Transcriptional regulator
ILQ59_RS25545	COG4943	cyclic-guanylate-specific phosphodiesterase activity
ILQ59_RS25555	COG0629	single-stranded DNA binding
ILQ59_RS25560	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
ILQ59_RS25565	COG2315	Protein conserved in bacteria
ILQ59_RS25570	COG0432	Pfam Uncharacterised protein family UPF0047
ILQ59_RS25575	COG3700	Belongs to the class B bacterial acid phosphatase family
ILQ59_RS25585	COG1448	Aminotransferase
ILQ59_RS25590	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ILQ59_RS25595	COG0305	Participates in initiation and elongation during chromosome replication
ILQ59_RS25600	COG0604	alcohol dehydrogenase
ILQ59_RS25610	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ILQ59_RS25650	COG5301	cellulose 1,4-beta-cellobiosidase activity
ILQ59_RS25670	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
ILQ59_RS25710	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ILQ59_RS25720	COG0735	belongs to the Fur family
ILQ59_RS25725	COG3237	CsbD-like
ILQ59_RS25730	COG0534	Mate efflux family protein
ILQ59_RS25740	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
ILQ59_RS25760	COG1357	PFAM Pentapeptide repeats (8 copies)
ILQ59_RS25775	COG3842	ATPase activity
ILQ59_RS25780	COG2182	Extracellular solute-binding protein
ILQ59_RS25785	COG1175	transmembrane transport
ILQ59_RS25790	COG3833	ABC-type maltose transport systems, permease component
ILQ59_RS25795	COG0477	Major facilitator Superfamily
ILQ59_RS25795	COG2814	Major facilitator Superfamily
ILQ59_RS25815	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ILQ59_RS25840	COG0527	aspartate kinase activity
ILQ59_RS25850	COG1187	pseudouridine synthase activity
ILQ59_RS25895	COG1283	sodium-dependent phosphate transmembrane transporter activity
ILQ59_RS25900	COG0646	methionine synthase
ILQ59_RS25900	COG1410	methionine synthase
ILQ59_RS25905	COG1414	Transcriptional regulator
ILQ59_RS25920	COG2224	Isocitrate lyase
ILQ59_RS25925	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
ILQ59_RS25935	COG0456	acetyltransferase
ILQ59_RS25965	COG0151	Belongs to the GarS family
ILQ59_RS25970	COG2204	response regulator
ILQ59_RS25975	COG4191	Histidine kinase
ILQ59_RS25980	COG3678	ATP-independent chaperone mediated protein folding
ILQ59_RS25995	COG3068	Protein conserved in bacteria
ILQ59_RS26035	COG2104	thiamine diphosphate biosynthetic process
ILQ59_RS26040	COG2022	thiamine diphosphate biosynthetic process
ILQ59_RS26045	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
ILQ59_RS26085	COG0250	Participates in transcription elongation, termination and antitermination
ILQ59_RS26090	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ILQ59_RS26125	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
ILQ59_RS26125	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
ILQ59_RS26130	COG0812	UDP-N-acetylmuramate dehydrogenase activity
ILQ59_RS26155	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ILQ59_RS26160	COG4206	TonB-dependent receptor
ILQ59_RS26165	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ILQ59_RS26175	COG1309	transcriptional regulator
ILQ59_RS26180	COG0477	Major facilitator Superfamily
ILQ59_RS26185	COG1473	amidohydrolase
ILQ59_RS26195	COG0583	DNA-binding transcription factor activity
ILQ59_RS26210	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
ILQ59_RS26225	COG2194	sulfuric ester hydrolase activity
ILQ59_RS26230	COG2207	Transcriptional regulator
ILQ59_RS26235	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ILQ59_RS26240	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
ILQ59_RS26245	COG1882	Formate acetyltransferase
ILQ59_RS26250	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ILQ59_RS26255	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ILQ59_RS26260	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ILQ59_RS26260	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ59_RS26260	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ59_RS26265	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ILQ59_RS26270	COG0371	Dehydrogenase
ILQ59_RS26275	COG3738	Protein conserved in bacteria
ILQ59_RS26280	COG0697	spore germination
ILQ59_RS26290	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
ILQ59_RS26295	COG0527	aspartate kinase activity
ILQ59_RS26295	COG0460	homoserine dehydrogenase
ILQ59_RS26300	COG0626	cystathionine gamma-synthase activity
ILQ59_RS26310	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
ILQ59_RS26325	COG3209	COG3209 Rhs family protein
ILQ59_RS26335	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ILQ59_RS26340	COG1609	Transcriptional regulator
ILQ59_RS26345	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ILQ59_RS26360	COG1575	Belongs to the MenA family. Type 1 subfamily
ILQ59_RS26385	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
ILQ59_RS26395	COG1494	fructose-1,6-bisphosphatase
ILQ59_RS26405	COG0589	response to stress
ILQ59_RS26410	COG3691	Protein conserved in bacteria
ILQ59_RS26415	COG3152	Membrane
ILQ59_RS26435	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
ILQ59_RS26450	COG3678	ATP-independent chaperone mediated protein folding
ILQ59_RS26455	COG0745	RESPONSE REGULATOR receiver
ILQ59_RS26460	COG2205	protein histidine kinase activity
ILQ59_RS26465	COG2258	MOSC domain
ILQ59_RS26475	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ILQ59_RS26485	COG4977	sequence-specific DNA binding
ILQ59_RS26485	COG1917	Cupin 2, conserved barrel domain protein
ILQ59_RS26520	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ59_RS26525	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ILQ59_RS26525	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ILQ59_RS26530	COG1363	Peptidase, m42
ILQ59_RS26535	COG3711	transcriptional antiterminator
ILQ59_RS26535	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ILQ59_RS26555	COG0437	4 iron, 4 sulfur cluster binding
ILQ59_RS26560	COG2864	formate dehydrogenase
ILQ59_RS26570	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ILQ59_RS26575	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ILQ59_RS26590	COG0456	acetyltransferase
ILQ59_RS26605	COG1011	Hydrolase
ILQ59_RS26610	COG1349	DNA-binding transcription factor activity
ILQ59_RS26615	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ILQ59_RS26620	COG2084	Dehydrogenase
ILQ59_RS26625	COG3684	Belongs to the aldolase LacD family
ILQ59_RS26630	COG2942	2-epimerase
ILQ59_RS26635	COG2017	converts alpha-aldose to the beta-anomer
ILQ59_RS26645	COG1501	Belongs to the glycosyl hydrolase 31 family
ILQ59_RS26650	COG2211	Major facilitator Superfamily
ILQ59_RS26655	COG2211	Major facilitator Superfamily
ILQ59_RS26660	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
ILQ59_RS26665	COG2271	Major facilitator Superfamily
ILQ59_RS26670	COG1082	Xylose isomerase domain protein TIM barrel
ILQ59_RS26675	COG2188	Transcriptional regulator
ILQ59_RS26680	COG1217	gtp-binding protein TYPA
ILQ59_RS26685	COG0174	glutamine synthetase
ILQ59_RS26690	COG3852	Histidine kinase
ILQ59_RS26695	COG2204	response regulator
ILQ59_RS26705	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ILQ59_RS26710	COG3078	GTPase activator activity
ILQ59_RS26720	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ILQ59_RS26720	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ILQ59_RS26730	COG5339	Protein conserved in bacteria
ILQ59_RS26735	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ILQ59_RS26740	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
ILQ59_RS26745	COG3084	Protein conserved in bacteria
ILQ59_RS26750	COG0746	molybdenum cofactor guanylyltransferase activity
ILQ59_RS26755	COG1763	Mo-molybdopterin cofactor biosynthetic process
ILQ59_RS26785	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
ILQ59_RS26790	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ILQ59_RS26795	COG1739	Uncharacterized protein family UPF0029
ILQ59_RS26810	COG0183	Belongs to the thiolase family
ILQ59_RS26815	COG0543	2 iron, 2 sulfur cluster binding
ILQ59_RS26820	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
ILQ59_RS26825	COG0250	Participates in transcription elongation, termination and antitermination
ILQ59_RS26830	COG0084	hydrolase, TatD family'
ILQ59_RS26835	COG0805	protein transport
ILQ59_RS26840	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ILQ59_RS26845	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ILQ59_RS26855	COG3165	ubiquinone biosynthetic process from chorismate
ILQ59_RS26865	COG1322	Protein conserved in bacteria
ILQ59_RS26870	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
ILQ59_RS26875	COG0412	Dienelactone hydrolase
ILQ59_RS26885	COG0583	DNA-binding transcription factor activity
ILQ59_RS26890	COG0697	spore germination
ILQ59_RS26895	COG0561	phosphatase activity
ILQ59_RS26900	COG2267	carboxylic ester hydrolase activity
ILQ59_RS26905	COG1280	lysine exporter protein (LysE YggA)
ILQ59_RS26910	COG1280	lysine exporter protein (LysE YggA)
ILQ59_RS26915	COG0514	ATP-dependent DNA helicase (RecQ)
ILQ59_RS26920	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
ILQ59_RS26925	COG2050	protein possibly involved in aromatic compounds catabolism
ILQ59_RS26930	COG2962	Rard protein
ILQ59_RS26955	COG0598	Magnesium transport protein CorA
ILQ59_RS26960	COG3698	Phosphodiester glycosidase
ILQ59_RS26965	COG1912	Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase
ILQ59_RS26970	COG0210	DNA helicase
ILQ59_RS26975	COG1011	Hydrolase
ILQ59_RS26985	COG3159	Protein conserved in bacteria
ILQ59_RS26995	COG5567	small periplasmic lipoprotein
ILQ59_RS27010	COG3072	Adenylate cyclase
ILQ59_RS27020	COG1587	Uroporphyrinogen-III synthase
ILQ59_RS27025	COG2959	enzyme of heme biosynthesis
ILQ59_RS27030	COG3071	HemY protein
ILQ59_RS27035	COG3119	arylsulfatase activity
ILQ59_RS27040	COG0641	radical SAM
ILQ59_RS27070	COG1113	amino acid transport
ILQ59_RS27090	COG2244	polysaccharide biosynthetic process
ILQ59_RS27095	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ILQ59_RS27100	COG0456	acetyltransferase
ILQ59_RS27105	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
ILQ59_RS27110	COG1088	dTDP-glucose 4,6-dehydratase activity
ILQ59_RS27115	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ILQ59_RS27120	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
ILQ59_RS27125	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
ILQ59_RS27130	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ILQ59_RS27135	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
ILQ59_RS27145	COG3118	belongs to the thioredoxin family
ILQ59_RS27160	COG0210	DNA helicase
ILQ59_RS27165	COG3692	DNA binding
ILQ59_RS27170	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ILQ59_RS27180	COG0583	DNA-binding transcription factor activity
ILQ59_RS27185	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ILQ59_RS27195	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ILQ59_RS27200	COG3978	acetolactate synthase activity
ILQ59_RS27220	COG0606	chelatase, subunit chli
ILQ59_RS27225	COG3085	chromosome segregation
ILQ59_RS27265	COG2186	Transcriptional regulator
ILQ59_RS27270	COG0477	Major facilitator Superfamily
ILQ59_RS27275	COG1609	Transcriptional regulator
ILQ59_RS27280	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ILQ59_RS27285	COG1879	ABC-type sugar transport system periplasmic component
ILQ59_RS27290	COG1172	Belongs to the binding-protein-dependent transport system permease family
ILQ59_RS27295	COG1129	ABC transporter
ILQ59_RS27305	COG3158	transport of potassium into the cell
ILQ59_RS27325	COG1522	sequence-specific DNA binding
ILQ59_RS27330	COG0716	FMN binding
ILQ59_RS27395	COG3468	outer membrane autotransporter barrel domain protein
ILQ59_RS27405	COG0726	polysaccharide deacetylase
ILQ59_RS27410	COG0297	glycogen (starch) synthase activity
ILQ59_RS27415	COG2194	sulfuric ester hydrolase activity
ILQ59_RS27420	COG1560	Kdo2-lipid A biosynthetic process
ILQ59_RS27440	COG3436	PFAM IS66 Orf2 family protein
ILQ59_RS27445	COG4372	Transposase
ILQ59_RS27465	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ILQ59_RS27535	COG2274	protein secretion by the type I secretion system
ILQ59_RS27700	COG1475	DNA binding
ILQ59_RS27785	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
ILQ59_RS27795	COG1525	nuclease