locus-tag	class	description
FYA05_RS00020	COG4206	TonB-dependent receptor
FYA05_RS00035	COG1309	transcriptional regulator
FYA05_RS00045	COG0583	DNA-binding transcription factor activity
FYA05_RS00060	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FYA05_RS00075	COG2194	sulfuric ester hydrolase activity
FYA05_RS00080	COG2207	Transcriptional regulator
FYA05_RS00085	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYA05_RS00090	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FYA05_RS00095	COG1882	Formate acetyltransferase
FYA05_RS00100	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYA05_RS00105	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYA05_RS00110	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA05_RS00110	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA05_RS00110	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FYA05_RS00115	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FYA05_RS00120	COG0371	Dehydrogenase
FYA05_RS00125	COG3738	Protein conserved in bacteria
FYA05_RS00130	COG0697	spore germination
FYA05_RS00140	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FYA05_RS00145	COG0460	homoserine dehydrogenase
FYA05_RS00145	COG0527	aspartate kinase activity
FYA05_RS00150	COG0626	cystathionine gamma-synthase activity
FYA05_RS00160	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
FYA05_RS00170	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FYA05_RS00175	COG1609	Transcriptional regulator
FYA05_RS00180	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FYA05_RS00195	COG1575	Belongs to the MenA family. Type 1 subfamily
FYA05_RS00210	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FYA05_RS00220	COG1494	fructose-1,6-bisphosphatase
FYA05_RS00225	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FYA05_RS00230	COG0589	response to stress
FYA05_RS00235	COG3691	Protein conserved in bacteria
FYA05_RS00240	COG3152	Membrane
FYA05_RS00260	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
FYA05_RS00275	COG3678	ATP-independent chaperone mediated protein folding
FYA05_RS00280	COG0745	RESPONSE REGULATOR receiver
FYA05_RS00285	COG2205	protein histidine kinase activity
FYA05_RS00290	COG2258	MOSC domain
FYA05_RS00300	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FYA05_RS00340	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA05_RS00345	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYA05_RS00345	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYA05_RS00350	COG1363	Peptidase, m42
FYA05_RS00355	COG3711	transcriptional antiterminator
FYA05_RS00355	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA05_RS00375	COG0437	4 iron, 4 sulfur cluster binding
FYA05_RS00380	COG2864	formate dehydrogenase
FYA05_RS00390	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FYA05_RS00395	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FYA05_RS00400	COG0456	acetyltransferase
FYA05_RS00415	COG1011	Hydrolase
FYA05_RS00420	COG1349	DNA-binding transcription factor activity
FYA05_RS00425	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYA05_RS00430	COG2084	Dehydrogenase
FYA05_RS00435	COG3684	Belongs to the aldolase LacD family
FYA05_RS00440	COG2942	2-epimerase
FYA05_RS00445	COG2017	converts alpha-aldose to the beta-anomer
FYA05_RS00450	COG1501	Belongs to the glycosyl hydrolase 31 family
FYA05_RS00455	COG2211	Major facilitator Superfamily
FYA05_RS00460	COG2211	Major facilitator Superfamily
FYA05_RS00465	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FYA05_RS00470	COG2271	Major facilitator Superfamily
FYA05_RS00475	COG1082	Xylose isomerase domain protein TIM barrel
FYA05_RS00480	COG2188	Transcriptional regulator
FYA05_RS00485	COG1217	gtp-binding protein TYPA
FYA05_RS00490	COG0174	glutamine synthetase
FYA05_RS00495	COG3852	Histidine kinase
FYA05_RS00500	COG2204	response regulator
FYA05_RS00510	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FYA05_RS00525	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FYA05_RS00525	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FYA05_RS00535	COG0204	Acyl-transferase
FYA05_RS00540	COG5339	Protein conserved in bacteria
FYA05_RS00545	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FYA05_RS00550	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FYA05_RS00555	COG3084	Protein conserved in bacteria
FYA05_RS00560	COG0746	molybdenum cofactor guanylyltransferase activity
FYA05_RS00565	COG1763	Mo-molybdopterin cofactor biosynthetic process
FYA05_RS00600	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
FYA05_RS00605	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FYA05_RS00610	COG1739	Uncharacterized protein family UPF0029
FYA05_RS00625	COG0183	Belongs to the thiolase family
FYA05_RS00630	COG0543	2 iron, 2 sulfur cluster binding
FYA05_RS00635	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FYA05_RS00640	COG0250	Participates in transcription elongation, termination and antitermination
FYA05_RS00645	COG0084	hydrolase, TatD family'
FYA05_RS00650	COG0805	protein transport
FYA05_RS00655	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FYA05_RS00660	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FYA05_RS00670	COG3165	ubiquinone biosynthetic process from chorismate
FYA05_RS00680	COG1322	Protein conserved in bacteria
FYA05_RS00685	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
FYA05_RS00690	COG0412	Dienelactone hydrolase
FYA05_RS00700	COG0583	DNA-binding transcription factor activity
FYA05_RS00705	COG0697	spore germination
FYA05_RS00710	COG0561	phosphatase activity
FYA05_RS00715	COG2267	carboxylic ester hydrolase activity
FYA05_RS00720	COG1280	lysine exporter protein (LysE YggA)
FYA05_RS00725	COG1280	lysine exporter protein (LysE YggA)
FYA05_RS00730	COG0514	ATP-dependent DNA helicase (RecQ)
FYA05_RS00735	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
FYA05_RS00740	COG2050	protein possibly involved in aromatic compounds catabolism
FYA05_RS00745	COG2962	Rard protein
FYA05_RS00760	COG0598	Magnesium transport protein CorA
FYA05_RS00765	COG3698	Phosphodiester glycosidase
FYA05_RS00770	COG0210	DNA helicase
FYA05_RS00775	COG1011	Hydrolase
FYA05_RS00785	COG3159	Protein conserved in bacteria
FYA05_RS00795	COG5567	small periplasmic lipoprotein
FYA05_RS00810	COG3072	Adenylate cyclase
FYA05_RS00820	COG1587	Uroporphyrinogen-III synthase
FYA05_RS00825	COG2959	enzyme of heme biosynthesis
FYA05_RS00830	COG3071	HemY protein
FYA05_RS00835	COG3119	arylsulfatase activity
FYA05_RS00840	COG0641	radical SAM
FYA05_RS00865	COG1113	amino acid transport
FYA05_RS00885	COG2244	polysaccharide biosynthetic process
FYA05_RS00890	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FYA05_RS00895	COG0456	acetyltransferase
FYA05_RS00900	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
FYA05_RS00905	COG1088	dTDP-glucose 4,6-dehydratase activity
FYA05_RS00910	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FYA05_RS00915	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FYA05_RS00920	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
FYA05_RS00925	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FYA05_RS00930	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FYA05_RS00940	COG3118	belongs to the thioredoxin family
FYA05_RS00955	COG0210	DNA helicase
FYA05_RS00965	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FYA05_RS00975	COG0583	DNA-binding transcription factor activity
FYA05_RS00980	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FYA05_RS00990	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FYA05_RS00995	COG3978	acetolactate synthase activity
FYA05_RS01015	COG0606	chelatase, subunit chli
FYA05_RS01020	COG3085	chromosome segregation
FYA05_RS01060	COG2186	Transcriptional regulator
FYA05_RS01065	COG0477	Major facilitator Superfamily
FYA05_RS01070	COG1609	Transcriptional regulator
FYA05_RS01075	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYA05_RS01080	COG1879	ABC-type sugar transport system periplasmic component
FYA05_RS01085	COG1172	Belongs to the binding-protein-dependent transport system permease family
FYA05_RS01090	COG1129	ABC transporter
FYA05_RS01120	COG1522	sequence-specific DNA binding
FYA05_RS01125	COG0716	FMN binding
FYA05_RS01140	COG3312	ion transport
FYA05_RS01190	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FYA05_RS01195	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FYA05_RS01200	COG0573	inorganic phosphate transmembrane transporter activity
FYA05_RS01205	COG0581	inorganic phosphate transmembrane transporter activity
FYA05_RS01210	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FYA05_RS01215	COG0704	Plays a role in the regulation of phosphate uptake
FYA05_RS01220	COG3711	transcriptional antiterminator
FYA05_RS01225	COG2190	(PTS) system
FYA05_RS01225	COG1263	PTS System
FYA05_RS01225	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYA05_RS01230	COG2723	6-phospho-beta-galactosidase activity
FYA05_RS01240	COG2382	esterase
FYA05_RS01245	COG0363	glucosamine-6-phosphate deaminase activity
FYA05_RS01250	COG3196	Protein conserved in bacteria
FYA05_RS01260	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FYA05_RS01265	COG2252	PERMEase
FYA05_RS01270	COG0431	NADPH-dependent FMN reductase
FYA05_RS01275	COG2091	lysine biosynthetic process via aminoadipic acid
FYA05_RS01290	COG0814	amino acid
FYA05_RS01340	COG0592	DNA-directed DNA polymerase activity
FYA05_RS01350	COG0187	DNA topoisomerase II activity
FYA05_RS01355	COG3753	Protein conserved in bacteria
FYA05_RS01360	COG0561	phosphatase activity
FYA05_RS01370	COG2186	Transcriptional regulator
FYA05_RS01375	COG3734	2-keto-3-deoxy-galactonokinase
FYA05_RS01380	COG0800	Aldolase
FYA05_RS01390	COG2271	Major facilitator Superfamily
FYA05_RS01395	COG0644	oxidoreductase
FYA05_RS01400	COG0823	Involved in the tonB-independent uptake of proteins
FYA05_RS01405	COG5645	(Lipo)protein
FYA05_RS01425	COG2188	Transcriptional regulator
FYA05_RS01430	COG1263	PTS System
FYA05_RS01435	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYA05_RS01435	COG1263	PTS System
FYA05_RS01445	COG2207	Transcriptional regulator
FYA05_RS01450	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FYA05_RS01455	COG3119	arylsulfatase activity
FYA05_RS01465	COG2149	membrane
FYA05_RS01475	COG0641	radical SAM
FYA05_RS01480	COG2814	Major facilitator Superfamily
FYA05_RS01495	COG0028	Belongs to the TPP enzyme family
FYA05_RS01500	COG0440	acetolactate synthase activity
FYA05_RS01505	COG2197	response regulator
FYA05_RS01510	COG3851	Histidine kinase
FYA05_RS01515	COG2271	Major facilitator Superfamily
FYA05_RS01520	COG2271	Major facilitator Superfamily
FYA05_RS01530	COG2252	PERMEase
FYA05_RS01550	COG1464	Belongs to the NlpA lipoprotein family
FYA05_RS01555	COG0697	spore germination
FYA05_RS01560	COG2814	Major facilitator Superfamily
FYA05_RS01575	COG2211	Major facilitator Superfamily
FYA05_RS01580	COG1501	Belongs to the glycosyl hydrolase 31 family
FYA05_RS01585	COG2982	Protein involved in outer membrane biogenesis
FYA05_RS01590	COG2233	PERMEase
FYA05_RS01595	COG0786	glutamate:sodium symporter activity
FYA05_RS01600	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FYA05_RS01605	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FYA05_RS01610	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FYA05_RS01620	COG0194	GDP metabolic process
FYA05_RS01630	COG2860	membrane
FYA05_RS01635	COG3645	SOS response
FYA05_RS01640	COG1561	YicC-like family, N-terminal region
FYA05_RS01665	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FYA05_RS01695	COG1519	Transferase
FYA05_RS01700	COG0859	PFAM glycosyl transferase family 9
FYA05_RS01705	COG0438	transferase activity, transferring glycosyl groups
FYA05_RS01710	COG0515	serine threonine protein kinase
FYA05_RS01715	COG0438	transferase activity, transferring glycosyl groups
FYA05_RS01715	COG4641	Protein conserved in bacteria
FYA05_RS01720	COG0438	transferase activity, transferring glycosyl groups
FYA05_RS01725	COG1442	glycosyl transferase family 8
FYA05_RS01730	COG1442	glycosyl transferase family 8
FYA05_RS01735	COG3642	lipopolysaccharide core region biosynthetic process
FYA05_RS01745	COG0859	PFAM glycosyl transferase family 9
FYA05_RS01750	COG3307	-O-antigen
FYA05_RS01755	COG0859	PFAM glycosyl transferase family 9
FYA05_RS01760	COG0859	PFAM glycosyl transferase family 9
FYA05_RS01775	COG0156	8-amino-7-oxononanoate synthase activity
FYA05_RS01785	COG1216	Glycosyl transferase, family 2
FYA05_RS01790	COG2861	carbohydrate metabolic process
FYA05_RS01795	COG4942	peptidase
FYA05_RS01800	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
FYA05_RS01805	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FYA05_RS01810	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FYA05_RS01825	COG1045	serine acetyltransferase
FYA05_RS01830	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FYA05_RS01840	COG2186	Transcriptional regulator
FYA05_RS01845	COG1620	l-lactate permease
FYA05_RS01860	COG3722	fumarate hydratase activity
FYA05_RS01870	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA05_RS01870	COG2213	PTS system mannitol-specific
FYA05_RS01880	COG1566	PFAM secretion protein HlyD family protein
FYA05_RS01900	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
FYA05_RS01910	COG1413	lyase activity
FYA05_RS01915	COG3209	COG3209 Rhs family protein
FYA05_RS01920	COG0625	glutathione transferase activity
FYA05_RS01930	COG3276	selenocysteine insertion sequence binding
FYA05_RS01935	COG1454	alcohol dehydrogenase
FYA05_RS01940	COG1012	belongs to the aldehyde dehydrogenase family
FYA05_RS01955	COG1566	PFAM secretion protein HlyD family protein
FYA05_RS01960	COG0583	DNA-binding transcription factor activity
FYA05_RS01965	COG3713	MltA-interacting MipA family protein
FYA05_RS01975	COG0235	Class ii aldolase
FYA05_RS01980	COG3623	hexulose-6-phosphate isomerase
FYA05_RS01985	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
FYA05_RS01990	COG1070	Carbohydrate kinase
FYA05_RS01995	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FYA05_RS02000	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FYA05_RS02005	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FYA05_RS02010	COG2731	YhcH YjgK YiaL family protein
FYA05_RS02020	COG1414	Transcriptional regulator
FYA05_RS02025	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA05_RS02030	COG3977	Valine--pyruvate aminotransferase
FYA05_RS02035	COG0366	Alpha amylase catalytic
FYA05_RS02040	COG2992	FlgJ-related protein
FYA05_RS02045	COG1609	Transcriptional regulator
FYA05_RS02045	COG2207	Transcriptional regulator
FYA05_RS02050	COG4214	carbohydrate transport
FYA05_RS02055	COG1129	ABC transporter
FYA05_RS02060	COG4213	ABC transporter substrate-binding protein
FYA05_RS02070	COG1070	Carbohydrate kinase
FYA05_RS02075	COG4682	membrane
FYA05_RS02080	COG4682	membrane
FYA05_RS02085	COG3274	enterobacterial common antigen metabolic process
FYA05_RS02115	COG1278	Cold shock
FYA05_RS02120	COG2944	sequence-specific DNA binding
FYA05_RS02135	COG2885	chlorophyll binding
FYA05_RS02140	COG0243	molybdopterin cofactor binding
FYA05_RS02145	COG0456	acetyltransferase
FYA05_RS02150	COG2818	Glycosylase
FYA05_RS02155	COG5571	outer membrane autotransporter
FYA05_RS02160	COG2223	nitrite transmembrane transporter activity
FYA05_RS02165	COG2194	sulfuric ester hydrolase activity
FYA05_RS02190	COG0601	transmembrane transport
FYA05_RS02195	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA05_RS02200	COG0444	Belongs to the ABC transporter superfamily
FYA05_RS02205	COG4608	Belongs to the ABC transporter superfamily
FYA05_RS02210	COG0814	amino acid
FYA05_RS02225	COG2194	sulfuric ester hydrolase activity
FYA05_RS02250	COG1215	transferase activity, transferring glycosyl groups
FYA05_RS02255	COG1215	transferase activity, transferring glycosyl groups
FYA05_RS02260	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
FYA05_RS02265	COG3118	belongs to the thioredoxin family
FYA05_RS02265	COG0457	Tetratricopeptide repeat
FYA05_RS02270	COG2199	diguanylate cyclase activity
FYA05_RS02270	COG2200	EAL domain
FYA05_RS02280	COG0612	Peptidase, M16
FYA05_RS02285	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYA05_RS02290	COG2200	EAL domain
FYA05_RS02295	COG2982	Protein involved in outer membrane biogenesis
FYA05_RS02300	COG0477	Major facilitator Superfamily
FYA05_RS02305	COG1295	ribonuclease BN
FYA05_RS02310	COG0583	DNA-binding transcription factor activity
FYA05_RS02315	COG2197	response regulator
FYA05_RS02325	COG1858	cytochrome C peroxidase
FYA05_RS02330	COG0076	glutamate decarboxylase activity
FYA05_RS02335	COG2207	Transcriptional regulator
FYA05_RS02340	COG2207	Transcriptional regulator
FYA05_RS02345	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FYA05_RS02350	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA05_RS02360	COG2771	luxR family
FYA05_RS02365	COG3247	response to pH
FYA05_RS02380	COG1285	pathogenesis
FYA05_RS02385	COG2197	response regulator
FYA05_RS02390	COG3065	identical protein binding
FYA05_RS02410	COG1393	Belongs to the ArsC family
FYA05_RS02415	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FYA05_RS02420	COG0640	Transcriptional regulator
FYA05_RS02430	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FYA05_RS02435	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FYA05_RS02440	COG0339	signal peptide processing
FYA05_RS02450	COG3104	oligopeptide transport
FYA05_RS02455	COG0589	response to stress
FYA05_RS02465	COG0306	phosphate transporter
FYA05_RS02470	COG2081	HI0933 family
FYA05_RS02490	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA05_RS02495	COG0842	Transport permease protein
FYA05_RS02495	COG1129	ABC transporter
FYA05_RS02500	COG0842	Transport permease protein
FYA05_RS02505	COG5433	transposase activity
FYA05_RS02510	COG1413	lyase activity
FYA05_RS02520	COG3209	COG3209 Rhs family protein
FYA05_RS02530	COG1124	(ABC) transporter
FYA05_RS02535	COG0444	Belongs to the ABC transporter superfamily
FYA05_RS02540	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA05_RS02545	COG0601	transmembrane transport
FYA05_RS02550	COG0747	negative chemotaxis
FYA05_RS02555	COG2091	lysine biosynthetic process via aminoadipic acid
FYA05_RS02560	COG0628	permease
FYA05_RS02565	COG0477	Major facilitator Superfamily
FYA05_RS02575	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FYA05_RS02585	COG2217	Heavy metal translocating P-type atpase
FYA05_RS02590	COG3714	YhhN family
FYA05_RS02600	COG3776	membrane
FYA05_RS02605	COG0742	ribosomal rna small subunit methyltransferase
FYA05_RS02610	COG0552	protein localization to endoplasmic reticulum
FYA05_RS02615	COG2884	Cell division ATP-binding protein ftsE
FYA05_RS02620	COG2177	Part of the ABC transporter FtsEX involved in
FYA05_RS02625	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FYA05_RS02630	COG0683	leucine binding
FYA05_RS02635	COG0456	acetyltransferase
FYA05_RS02640	COG0683	leucine binding
FYA05_RS02645	COG0559	Belongs to the binding-protein-dependent transport system permease family
FYA05_RS02650	COG4177	L-phenylalanine transmembrane transporter activity
FYA05_RS02655	COG0411	ABC transporter
FYA05_RS02660	COG0410	ABC transporter
FYA05_RS02665	COG1653	transport
FYA05_RS02670	COG1175	transmembrane transport
FYA05_RS02675	COG0395	ABC-type sugar transport system, permease component
FYA05_RS02680	COG3842	ATPase activity
FYA05_RS02685	COG0584	glycerophosphoryl diester phosphodiesterase
FYA05_RS02695	COG0405	Gamma-glutamyltransferase
FYA05_RS02725	COG3157	Type VI secretion system effector, Hcp
FYA05_RS02730	COG1247	-acetyltransferase
FYA05_RS02735	COG0673	inositol 2-dehydrogenase activity
FYA05_RS02740	COG1741	Belongs to the pirin family
FYA05_RS02745	COG1609	Transcriptional regulator
FYA05_RS02750	COG3265	gluconokinase activity
FYA05_RS02755	COG2610	gluconate transmembrane transporter activity
FYA05_RS02760	COG2095	MarC family integral membrane protein
FYA05_RS02765	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FYA05_RS02790	COG0058	SHG alpha-glucan phosphorylase activity
FYA05_RS02800	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FYA05_RS02815	COG1349	DNA-binding transcription factor activity
FYA05_RS02820	COG4650	regulator
FYA05_RS02825	COG1690	Belongs to the RtcB family
FYA05_RS02840	COG0058	SHG alpha-glucan phosphorylase activity
FYA05_RS02845	COG1640	4-alpha-glucanotransferase
FYA05_RS02850	COG2610	gluconate transmembrane transporter activity
FYA05_RS02860	COG1040	competence protein
FYA05_RS02870	COG5464	transposase or invertase
FYA05_RS02880	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
FYA05_RS02885	COG1918	ferrous iron import across plasma membrane
FYA05_RS02890	COG2183	response to ionizing radiation
FYA05_RS02895	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FYA05_RS02915	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
FYA05_RS02925	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
FYA05_RS02930	COG1011	Hydrolase
FYA05_RS02940	COG0494	nUDIX hydrolase
FYA05_RS02945	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FYA05_RS02950	COG4972	Pilus assembly protein
FYA05_RS02955	COG3166	PFAM Fimbrial assembly family protein
FYA05_RS02970	COG4796	Type ii and iii secretion system protein
FYA05_RS02985	COG3266	domain, Protein
FYA05_RS02990	COG0338	D12 class N6 adenine-specific DNA methyltransferase
FYA05_RS02995	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FYA05_RS03000	COG0546	phosphoglycolate phosphatase activity
FYA05_RS03005	COG0180	Tryptophanyl-tRNA synthetase
FYA05_RS03015	COG2188	Transcriptional regulator
FYA05_RS03025	COG3457	Alanine racemase
FYA05_RS03030	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
FYA05_RS03035	COG1735	metal-dependent hydrolase with the TIM-barrel fold
FYA05_RS03050	COG0626	cystathionine gamma-synthase activity
FYA05_RS03055	COG2188	Transcriptional regulator
FYA05_RS03060	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYA05_RS03065	COG1082	Xylose isomerase domain protein TIM barrel
FYA05_RS03070	COG2222	sugar isomerase
FYA05_RS03075	COG0531	amino acid
FYA05_RS03090	COG2116	formate transmembrane transporter activity
FYA05_RS03095	COG2146	nitrite reductase [NAD(P)H] activity
FYA05_RS03100	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FYA05_RS03110	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FYA05_RS03120	COG2184	nucleotidyltransferase activity
FYA05_RS03125	COG0512	Glutamine amidotransferase of anthranilate synthase
FYA05_RS03130	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FYA05_RS03135	COG1289	transmembrane transporter activity
FYA05_RS03140	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FYA05_RS03145	COG1765	OsmC-like protein
FYA05_RS03150	COG3954	Phosphoribulokinase
FYA05_RS03160	COG0429	hydrolase of the alpha beta-hydrolase fold
FYA05_RS03165	COG0488	(ABC) transporter
FYA05_RS03180	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
FYA05_RS03185	COG1047	Peptidyl-prolyl cis-trans
FYA05_RS03195	COG0545	Peptidyl-prolyl cis-trans isomerase
FYA05_RS03200	COG2964	Protein conserved in bacteria
FYA05_RS03255	COG3979	chitinase
FYA05_RS03260	COG2906	2 iron, 2 sulfur cluster binding
FYA05_RS03265	COG2193	ferroxidase activity
FYA05_RS03270	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
FYA05_RS03275	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FYA05_RS03280	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FYA05_RS03285	COG3156	type II secretion system protein K
FYA05_RS03290	COG4795	General secretion pathway protein
FYA05_RS03295	COG2165	general secretion pathway protein
FYA05_RS03300	COG2165	general secretion pathway protein
FYA05_RS03305	COG2165	general secretion pathway protein
FYA05_RS03310	COG1459	type II secretion system
FYA05_RS03315	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FYA05_RS03320	COG1450	Type ii and iii secretion system protein
FYA05_RS03325	COG3031	protein transport across the cell outer membrane
FYA05_RS03330	COG3409	Peptidoglycan-binding domain 1 protein
FYA05_RS03330	COG3267	Type II secretory pathway component ExeA
FYA05_RS03355	COG0089	rRNA binding
FYA05_RS03445	COG0201	protein transport
FYA05_RS03485	COG0789	Transcriptional regulator
FYA05_RS03490	COG3036	rescue of stalled ribosome
FYA05_RS03500	COG0569	domain protein
FYA05_RS03520	COG0758	DNA mediated transformation
FYA05_RS03530	COG0551	DNA topoisomerase type I activity
FYA05_RS03555	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FYA05_RS03600	COG1126	abc transporter atp-binding protein
FYA05_RS03605	COG0765	amino acid transport
FYA05_RS03610	COG4597	amino acid ABC transporter
FYA05_RS03625	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FYA05_RS03630	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA05_RS03635	COG1309	transcriptional regulator
FYA05_RS03645	COG2189	Belongs to the N(4) N(6)-methyltransferase family
FYA05_RS03655	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FYA05_RS03665	COG4145	pantothenate transmembrane transporter activity
FYA05_RS03670	COG3924	membrane
FYA05_RS03675	COG0439	Biotin carboxylase
FYA05_RS03680	COG0511	ligase activity, forming carbon-carbon bonds
FYA05_RS03685	COG0604	alcohol dehydrogenase
FYA05_RS03690	COG2199	diguanylate cyclase activity
FYA05_RS03690	COG2200	EAL domain
FYA05_RS03695	COG1077	Cell shape determining protein MreB Mrl
FYA05_RS03700	COG1792	Involved in formation and maintenance of cell shape
FYA05_RS03705	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
FYA05_RS03710	COG0424	maF-like protein
FYA05_RS03715	COG1530	ribonuclease E activity
FYA05_RS03720	COG3164	Protein of unknown function
FYA05_RS03725	COG0312	modulator of DNA gyrase
FYA05_RS03730	COG0583	DNA-binding transcription factor activity
FYA05_RS03750	COG2732	(Barnase) inhibitor
FYA05_RS03770	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FYA05_RS03775	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FYA05_RS03780	COG3105	Protein conserved in bacteria
FYA05_RS03785	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FYA05_RS03800	COG0625	glutathione transferase activity
FYA05_RS03805	COG2969	positive regulation of protein catabolic process
FYA05_RS03810	COG3069	C4-dicarboxylate transmembrane transporter activity
FYA05_RS03840	COG2731	YhcH YjgK YiaL family protein
FYA05_RS03845	COG4804	nuclease activity
FYA05_RS03850	COG3539	Fimbrial protein
FYA05_RS03870	COG3188	usher protein
FYA05_RS03875	COG3121	Chaperone
FYA05_RS03880	COG3539	Fimbrial protein
FYA05_RS03885	COG0493	'glutamate synthase
FYA05_RS03890	COG0070	glutamate synthase
FYA05_RS03890	COG0069	glutamate synthase activity
FYA05_RS03890	COG0067	glutamate synthase
FYA05_RS03895	COG1242	4 iron, 4 sulfur cluster binding
FYA05_RS03900	COG0784	Response regulator, receiver
FYA05_RS03900	COG5002	protein histidine kinase activity
FYA05_RS03900	COG2198	Histidine kinase
FYA05_RS03910	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
FYA05_RS03920	COG0515	serine threonine protein kinase
FYA05_RS03925	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA05_RS03940	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FYA05_RS03945	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FYA05_RS03950	COG1137	ATPase activity
FYA05_RS03955	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
FYA05_RS03960	COG3117	lipopolysaccharide transmembrane transporter activity
FYA05_RS03965	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
FYA05_RS03970	COG0517	IMP dehydrogenase activity
FYA05_RS03970	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
FYA05_RS03975	COG0530	calcium, potassium:sodium antiporter activity
FYA05_RS03980	COG1127	ABC transporter
FYA05_RS03985	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FYA05_RS03990	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FYA05_RS03995	COG2854	intermembrane phospholipid transfer
FYA05_RS04000	COG3113	response to antibiotic
FYA05_RS04005	COG5007	Belongs to the BolA IbaG family
FYA05_RS04015	COG3423	Transcriptional regulator
FYA05_RS04020	COG0142	geranyltranstransferase activity
FYA05_RS04035	COG0697	spore germination
FYA05_RS04045	COG2027	D-alanyl-D-alanine carboxypeptidase
FYA05_RS04050	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FYA05_RS04055	COG1534	Rna-binding protein
FYA05_RS04065	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FYA05_RS04070	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FYA05_RS04080	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FYA05_RS04090	COG2194	sulfuric ester hydrolase activity
FYA05_RS04110	COG0195	Participates in both transcription termination and antitermination
FYA05_RS04150	COG0513	Belongs to the DEAD box helicase family
FYA05_RS04155	COG0814	amino acid
FYA05_RS04160	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FYA05_RS04165	COG0826	peptidase U32
FYA05_RS04170	COG0826	peptidase U32
FYA05_RS04175	COG3154	lipid carrier protein
FYA05_RS04180	COG3153	acetyltransferase
FYA05_RS04195	COG0693	protein deglycase activity
FYA05_RS04200	COG0702	epimerase
FYA05_RS04205	COG0701	Predicted permease
FYA05_RS04210	COG2823	Periplasmic or secreted lipoprotein
FYA05_RS04225	COG3107	peptidoglycan biosynthetic process
FYA05_RS04230	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
FYA05_RS04235	COG3539	Fimbrial protein
FYA05_RS04240	COG3188	usher protein
FYA05_RS04245	COG3121	Chaperone
FYA05_RS04250	COG3539	Fimbrial protein
FYA05_RS04255	COG0363	glucosamine-6-phosphate deaminase activity
FYA05_RS04260	COG3716	PTS system mannose fructose sorbose family IID component
FYA05_RS04265	COG3715	PTS system
FYA05_RS04270	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYA05_RS04280	COG2222	sugar isomerase
FYA05_RS04295	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYA05_RS04305	COG1349	DNA-binding transcription factor activity
FYA05_RS04315	COG2002	toxin-antitoxin pair type II binding
FYA05_RS04320	COG2721	sulfolactate sulfo-lyase activity
FYA05_RS04325	COG2271	Major facilitator Superfamily
FYA05_RS04335	COG2084	Dehydrogenase
FYA05_RS04340	COG1929	Belongs to the glycerate kinase type-1 family
FYA05_RS04365	COG0583	DNA-binding transcription factor activity
FYA05_RS04370	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FYA05_RS04380	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FYA05_RS04385	COG1882	Formate acetyltransferase
FYA05_RS04390	COG0251	oxidation-reduction process
FYA05_RS04395	COG1760	l-serine dehydratase
FYA05_RS04400	COG0814	amino acid
FYA05_RS04415	COG1741	Belongs to the pirin family
FYA05_RS04420	COG0583	DNA-binding transcription factor activity
FYA05_RS04425	COG3152	Membrane
FYA05_RS04430	COG3152	Membrane
FYA05_RS04435	COG0435	Glutathione S-transferase
FYA05_RS04440	COG2259	Doxx family
FYA05_RS04450	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
FYA05_RS04455	COG4575	ribosome binding
FYA05_RS04460	COG1422	Protein of unknown function (DUF1090)
FYA05_RS04470	COG0586	Pfam SNARE associated Golgi protein
FYA05_RS04475	COG2186	Transcriptional regulator
FYA05_RS04480	COG2271	Major facilitator Superfamily
FYA05_RS04490	COG2721	sulfolactate sulfo-lyase activity
FYA05_RS04500	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
FYA05_RS04505	COG0861	Integral membrane protein TerC family
FYA05_RS04510	COG0673	inositol 2-dehydrogenase activity
FYA05_RS04515	COG2949	membrane
FYA05_RS04520	COG1451	nucleotide metabolic process
FYA05_RS04530	COG4680	protein conserved in bacteria
FYA05_RS04535	COG5499	transcription regulator containing HTH domain
FYA05_RS04540	COG0446	pyridine nucleotide-disulphide oxidoreductase
FYA05_RS04540	COG1902	pentaerythritol trinitrate reductase activity
FYA05_RS04545	COG3408	Glycogen debranching enzyme
FYA05_RS04545	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
FYA05_RS04555	COG0531	amino acid
FYA05_RS04560	COG2731	YhcH YjgK YiaL family protein
FYA05_RS04565	COG3250	beta-galactosidase activity
FYA05_RS04570	COG1609	Transcriptional regulator
FYA05_RS04575	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FYA05_RS04585	COG0840	transmembrane signaling receptor activity
FYA05_RS04590	COG1695	Transcriptional regulator
FYA05_RS04595	COG2375	cellular response to nickel ion
FYA05_RS04610	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FYA05_RS04615	COG0358	DNA primase activity
FYA05_RS04620	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FYA05_RS04630	COG0471	metal ion transport
FYA05_RS04640	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
FYA05_RS04645	COG0583	DNA-binding transcription factor activity
FYA05_RS04655	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FYA05_RS04670	COG4991	sh3 domain protein
FYA05_RS04675	COG3025	triphosphatase activity
FYA05_RS04700	COG2268	Band 7 protein
FYA05_RS04705	COG1585	Membrane protein implicated in regulation of membrane protease activity
FYA05_RS04715	COG3539	Fimbrial protein
FYA05_RS04720	COG3121	Chaperone
FYA05_RS04725	COG3188	usher protein
FYA05_RS04735	COG3539	Fimbrial protein
FYA05_RS04740	COG2960	long-chain fatty acid transporting porin activity
FYA05_RS04755	COG3384	dioxygenase
FYA05_RS04760	COG0754	glutathionylspermidine amidase activity
FYA05_RS04770	COG1538	Outer membrane efflux protein
FYA05_RS04775	COG0494	nUDIX hydrolase
FYA05_RS04780	COG3151	Protein conserved in bacteria
FYA05_RS04785	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FYA05_RS04790	COG3150	esterase
FYA05_RS04795	COG0187	DNA topoisomerase II activity
FYA05_RS04800	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
FYA05_RS04805	COG2249	NAD(P)H dehydrogenase (quinone) activity
FYA05_RS04815	COG0642	Histidine kinase
FYA05_RS04820	COG0745	RESPONSE REGULATOR receiver
FYA05_RS04825	COG3111	PFAM Bacterial OB fold (BOF) protein
FYA05_RS04830	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
FYA05_RS04840	COG2944	sequence-specific DNA binding
FYA05_RS04845	COG4166	transmembrane transport
FYA05_RS04850	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FYA05_RS04855	COG0204	Acyl-transferase
FYA05_RS04860	COG2132	Multicopper oxidase
FYA05_RS04865	COG1032	radical SAM domain protein
FYA05_RS04870	COG4238	major outer membrane lipoprotein
FYA05_RS04880	COG0656	L-ascorbic acid biosynthetic process
FYA05_RS04885	COG1979	alcohol dehydrogenase
FYA05_RS04890	COG2207	Transcriptional regulator
FYA05_RS04895	COG0586	Pfam SNARE associated Golgi protein
FYA05_RS04900	COG0626	cystathionine gamma-synthase activity
FYA05_RS04905	COG0811	peptide transport
FYA05_RS04910	COG0848	biopolymer transport protein
FYA05_RS04915	COG1028	Short-chain dehydrogenase reductase Sdr
FYA05_RS04925	COG0667	Aldo Keto reductase
FYA05_RS04940	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
FYA05_RS04945	COG0437	4 iron, 4 sulfur cluster binding
FYA05_RS04950	COG5557	Pfam Polysulphide reductase, NrfD
FYA05_RS04955	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
FYA05_RS04960	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
FYA05_RS04965	COG1773	rubredoxin
FYA05_RS04975	COG0298	carbon dioxide binding
FYA05_RS04980	COG0625	glutathione transferase activity
FYA05_RS04985	COG0754	glutathionylspermidine amidase activity
FYA05_RS04990	COG0306	phosphate transporter
FYA05_RS04995	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FYA05_RS05000	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FYA05_RS05005	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FYA05_RS05010	COG2244	polysaccharide biosynthetic process
FYA05_RS05020	COG0456	acetyltransferase
FYA05_RS05025	COG2186	Transcriptional regulator
FYA05_RS05030	COG0277	FAD linked oxidase domain protein
FYA05_RS05035	COG0277	FAD linked oxidase domain protein
FYA05_RS05040	COG0247	lactate metabolic process
FYA05_RS05045	COG3193	protein, possibly involved in utilization of glycolate and propanediol
FYA05_RS05050	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FYA05_RS05055	COG1620	l-lactate permease
FYA05_RS05060	COG3064	Membrane
FYA05_RS05065	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
FYA05_RS05075	COG3031	protein transport across the cell outer membrane
FYA05_RS05085	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FYA05_RS05095	COG1811	Na channel or pump
FYA05_RS05100	COG1982	Orn Lys Arg decarboxylase major
FYA05_RS05105	COG2211	Major facilitator Superfamily
FYA05_RS05120	COG1194	a g-specific adenine glycosylase
FYA05_RS05130	COG3171	Protein conserved in bacteria
FYA05_RS05140	COG0252	asparaginase activity
FYA05_RS05150	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FYA05_RS05155	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FYA05_RS05165	COG0762	integral membrane protein
FYA05_RS05170	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FYA05_RS05175	COG2805	Type II/IV secretion system protein
FYA05_RS05190	COG0189	ligase activity
FYA05_RS05195	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FYA05_RS05200	COG2356	endonuclease I
FYA05_RS05210	COG2814	Major facilitator Superfamily
FYA05_RS05225	COG1166	arginine decarboxylase activity
FYA05_RS05235	COG0501	Belongs to the peptidase M48B family
FYA05_RS05240	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FYA05_RS05245	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA05_RS05250	COG2213	PTS system mannitol-specific
FYA05_RS05255	COG1063	alcohol dehydrogenase
FYA05_RS05260	COG1494	fructose-1,6-bisphosphatase
FYA05_RS05265	COG3722	fumarate hydratase activity
FYA05_RS05270	COG1072	(Pantothenic acid kinase))
FYA05_RS05285	COG0191	fructose-bisphosphate aldolase activity
FYA05_RS05290	COG0668	transmembrane transport
FYA05_RS05295	COG1279	arginine transmembrane transporter activity
FYA05_RS05300	COG2968	Membrane
FYA05_RS05305	COG0583	DNA-binding transcription factor activity
FYA05_RS05310	COG0427	acetyl-CoA hydrolase
FYA05_RS05315	COG1024	Enoyl-CoA hydratase
FYA05_RS05320	COG1703	isobutyryl-CoA mutase activity
FYA05_RS05325	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FYA05_RS05325	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FYA05_RS05345	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FYA05_RS05355	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FYA05_RS05375	COG0006	proline dipeptidase activity
FYA05_RS05380	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FYA05_RS05385	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FYA05_RS05410	COG1028	Short-chain dehydrogenase reductase Sdr
FYA05_RS05415	COG2723	6-phospho-beta-galactosidase activity
FYA05_RS05425	COG1272	protein, Hemolysin III
FYA05_RS05435	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
FYA05_RS05445	COG0716	FMN binding
FYA05_RS05450	COG4974	Belongs to the 'phage' integrase family
FYA05_RS05455	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FYA05_RS05460	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FYA05_RS05470	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FYA05_RS05490	COG2233	PERMEase
FYA05_RS05495	COG0493	'glutamate synthase
FYA05_RS05495	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA05_RS05500	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA05_RS05505	COG2252	PERMEase
FYA05_RS05510	COG0402	S-adenosylhomocysteine deaminase activity
FYA05_RS05515	COG2233	PERMEase
FYA05_RS05520	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FYA05_RS05520	COG2080	2 iron, 2 sulfur cluster binding
FYA05_RS05525	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
FYA05_RS05530	COG0402	S-adenosylhomocysteine deaminase activity
FYA05_RS05535	COG0493	'glutamate synthase
FYA05_RS05535	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA05_RS05540	COG2068	MobA-Related Protein
FYA05_RS05545	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FYA05_RS05550	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
FYA05_RS05550	COG3608	succinylglutamate desuccinylase aspartoacylase
FYA05_RS05555	COG0549	Belongs to the carbamate kinase family
FYA05_RS05565	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FYA05_RS05570	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FYA05_RS05575	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FYA05_RS05580	COG3829	transcription factor binding
FYA05_RS05585	COG2080	2 iron, 2 sulfur cluster binding
FYA05_RS05590	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
FYA05_RS05595	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FYA05_RS05600	COG4942	peptidase
FYA05_RS05650	COG0457	Tetratricopeptide repeat
FYA05_RS05650	COG3710	Transcriptional regulator
FYA05_RS05655	COG0457	Tetratricopeptide repeat
FYA05_RS05680	COG3710	Transcriptional regulator
FYA05_RS05685	COG2771	luxR family
FYA05_RS05690	COG0814	amino acid
FYA05_RS05695	COG0183	Belongs to the thiolase family
FYA05_RS05705	COG1028	Short-chain dehydrogenase reductase Sdr
FYA05_RS05710	COG2814	Major facilitator Superfamily
FYA05_RS05715	COG1794	racemase activity, acting on amino acids and derivatives
FYA05_RS05720	COG0583	DNA-binding transcription factor activity
FYA05_RS05730	COG1609	Transcriptional regulator
FYA05_RS05750	COG0667	Aldo Keto reductase
FYA05_RS05760	COG0861	Integral membrane protein TerC family
FYA05_RS05780	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
FYA05_RS05795	COG2165	general secretion pathway protein
FYA05_RS05800	COG4795	General secretion pathway protein
FYA05_RS05810	COG4967	type IV pilus modification protein PilV
FYA05_RS05815	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
FYA05_RS05820	COG1025	Belongs to the peptidase M16 family
FYA05_RS05825	COG1074	ATP-dependent DNA helicase activity
FYA05_RS05830	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FYA05_RS05835	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FYA05_RS05835	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
FYA05_RS05840	COG0860	N-Acetylmuramoyl-L-alanine amidase
FYA05_RS05860	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
FYA05_RS05865	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FYA05_RS05870	COG2166	iron-sulfur cluster assembly
FYA05_RS05875	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FYA05_RS05885	COG0583	DNA-binding transcription factor activity
FYA05_RS05890	COG2363	Small membrane protein
FYA05_RS05900	COG1349	DNA-binding transcription factor activity
FYA05_RS05910	COG1070	Carbohydrate kinase
FYA05_RS05920	COG0738	Major facilitator superfamily
FYA05_RS05925	COG0235	Class ii aldolase
FYA05_RS05930	COG1454	alcohol dehydrogenase
FYA05_RS05940	COG1760	l-serine dehydratase
FYA05_RS05945	COG0814	amino acid
FYA05_RS05950	COG1611	Belongs to the LOG family
FYA05_RS05965	COG3098	single-species biofilm formation
FYA05_RS05970	COG0564	pseudouridine synthase activity
FYA05_RS05975	COG0716	FMN binding
FYA05_RS05980	COG2271	Major facilitator Superfamily
FYA05_RS05985	COG4948	Mandelate Racemase Muconate Lactonizing
FYA05_RS05990	COG4948	Mandelate Racemase Muconate Lactonizing
FYA05_RS05995	COG3437	response regulator, receiver
FYA05_RS05995	COG3850	Histidine kinase
FYA05_RS05995	COG4999	Histidine kinase
FYA05_RS05995	COG2205	protein histidine kinase activity
FYA05_RS06000	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FYA05_RS06005	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FYA05_RS06010	COG2336	PFAM SpoVT AbrB
FYA05_RS06015	COG2337	Toxic component of a toxin-antitoxin (TA) module
FYA05_RS06020	COG3956	TIGRFAM MazG family protein
FYA05_RS06035	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
FYA05_RS06045	COG0602	queuosine metabolic process
FYA05_RS06050	COG1070	Carbohydrate kinase
FYA05_RS06055	COG2223	nitrite transmembrane transporter activity
FYA05_RS06060	COG1028	Short-chain dehydrogenase reductase Sdr
FYA05_RS06065	COG0277	FAD linked oxidase domain protein
FYA05_RS06070	COG0477	Major facilitator Superfamily
FYA05_RS06075	COG2086	electron transfer activity
FYA05_RS06080	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
FYA05_RS06085	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
FYA05_RS06090	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
FYA05_RS06095	COG0644	oxidoreductase
FYA05_RS06100	COG0720	synthase
FYA05_RS06105	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
FYA05_RS06125	COG1203	CRISPR-associated helicase, Cas3
FYA05_RS06140	COG1857	crispr-associated protein
FYA05_RS06155	COG1518	maintenance of DNA repeat elements
FYA05_RS06160	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FYA05_RS06165	COG2234	aminopeptidase activity
FYA05_RS06220	COG4942	peptidase
FYA05_RS06220	COG1388	LysM domain
FYA05_RS06230	COG2610	gluconate transmembrane transporter activity
FYA05_RS06235	COG3622	Belongs to the hyi family
FYA05_RS06240	COG0235	Class ii aldolase
FYA05_RS06245	COG3395	kinase activity
FYA05_RS06250	COG2084	Dehydrogenase
FYA05_RS06255	COG1349	DNA-binding transcription factor activity
FYA05_RS06260	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FYA05_RS06275	COG3604	Transcriptional regulator
FYA05_RS06280	COG0309	Hydrogenase expression formation protein (HypE)
FYA05_RS06285	COG0409	Hydrogenase expression formation protein
FYA05_RS06290	COG0298	carbon dioxide binding
FYA05_RS06295	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
FYA05_RS06300	COG0375	protein maturation
FYA05_RS06315	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA05_RS06320	COG0651	ATP synthesis coupled electron transport
FYA05_RS06325	COG0650	Formate hydrogenlyase subunit 4
FYA05_RS06330	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
FYA05_RS06330	COG3261	NADH dehydrogenase
FYA05_RS06335	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYA05_RS06340	COG3260	NADH ubiquinone oxidoreductase 20
FYA05_RS06350	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
FYA05_RS06355	COG2723	6-phospho-beta-galactosidase activity
FYA05_RS06360	COG1263	PTS System
FYA05_RS06360	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYA05_RS06365	COG1609	Transcriptional regulator
FYA05_RS06370	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA05_RS06375	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
FYA05_RS06395	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
FYA05_RS06395	COG0517	IMP dehydrogenase activity
FYA05_RS06400	COG1349	DNA-binding transcription factor activity
FYA05_RS06405	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA05_RS06410	COG1028	Short-chain dehydrogenase reductase Sdr
FYA05_RS06415	COG3731	PTS system glucitol sorbitol-specific IIA component
FYA05_RS06420	COG3732	PTS system glucitol sorbitol-specific
FYA05_RS06425	COG3730	PTS system glucitol sorbitol-specific
FYA05_RS06430	COG2951	lytic endotransglycosylase activity
FYA05_RS06435	COG1546	Belongs to the CinA family
FYA05_RS06455	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
FYA05_RS06485	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FYA05_RS06490	COG1238	metal cluster binding
FYA05_RS06505	COG2814	Major facilitator Superfamily
FYA05_RS06510	COG1566	PFAM secretion protein HlyD family protein
FYA05_RS06515	COG1846	Transcriptional regulator
FYA05_RS06525	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
FYA05_RS06535	COG2113	Glycine betaine
FYA05_RS06540	COG4176	ABC-type proline glycine betaine transport system permease component
FYA05_RS06545	COG4175	Glycine betaine
FYA05_RS06550	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FYA05_RS06555	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FYA05_RS06565	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FYA05_RS06570	COG4575	ribosome binding
FYA05_RS06585	COG2916	Histone family protein nucleoid-structuring protein H-NS
FYA05_RS06590	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FYA05_RS06595	COG0640	Transcriptional regulator
FYA05_RS06600	COG0401	homolog of Blt101
FYA05_RS06605	COG1652	LysM domain
FYA05_RS06610	COG1802	Transcriptional regulator
FYA05_RS06615	COG1113	amino acid transport
FYA05_RS06620	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FYA05_RS06625	COG1012	belongs to the aldehyde dehydrogenase family
FYA05_RS06630	COG0579	oxidoreductase
FYA05_RS06645	COG0366	Alpha amylase catalytic
FYA05_RS06670	COG3468	outer membrane autotransporter barrel domain protein
FYA05_RS06690	COG2003	Belongs to the UPF0758 family
FYA05_RS06735	COG2378	regulation of single-species biofilm formation
FYA05_RS06745	COG3596	GTP binding
FYA05_RS06760	COG1479	Protein of unknown function DUF262
FYA05_RS06770	COG1204	response to ionizing radiation
FYA05_RS06780	COG4983	Phage plasmid primase, P4 family domain protein
FYA05_RS06785	COG3311	Transcriptional regulator
FYA05_RS06795	COG0582	viral genome integration into host DNA
FYA05_RS06810	COG2867	negative regulation of translational initiation
FYA05_RS06820	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FYA05_RS06825	COG0497	DNA recombination
FYA05_RS06840	COG4536	flavin adenine dinucleotide binding
FYA05_RS06845	COG4137	Cytochrome C assembly protein
FYA05_RS06850	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FYA05_RS06875	COG2885	chlorophyll binding
FYA05_RS06880	COG2199	diguanylate cyclase activity
FYA05_RS06895	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FYA05_RS06900	COG0287	Prephenate dehydrogenase
FYA05_RS06900	COG1605	Chorismate mutase
FYA05_RS06905	COG1605	Chorismate mutase
FYA05_RS06905	COG0077	Prephenate dehydratase
FYA05_RS06915	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FYA05_RS06920	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FYA05_RS06925	COG0564	pseudouridine synthase activity
FYA05_RS06930	COG1496	oxidoreductase activity
FYA05_RS06935	COG0542	response to heat
FYA05_RS06965	COG5544	Lipoprotein
FYA05_RS06970	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FYA05_RS06975	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FYA05_RS06975	COG1042	CoA-binding domain protein
FYA05_RS06975	COG0045	succinate-CoA ligase (ADP-forming) activity
FYA05_RS06980	COG3148	PFAM DTW domain containing protein
FYA05_RS06985	COG3118	belongs to the thioredoxin family
FYA05_RS06990	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FYA05_RS07010	COG0583	DNA-binding transcription factor activity
FYA05_RS07015	COG0513	Belongs to the DEAD box helicase family
FYA05_RS07025	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FYA05_RS07035	COG1595	DNA-templated transcription, initiation
FYA05_RS07040	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
FYA05_RS07045	COG3026	antisigma factor binding
FYA05_RS07050	COG3086	response to oxidative stress
FYA05_RS07060	COG0681	Belongs to the peptidase S26 family
FYA05_RS07080	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FYA05_RS07095	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA05_RS07100	COG1737	Transcriptional regulator
FYA05_RS07105	COG0560	Phosphoserine phosphatase
FYA05_RS07120	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FYA05_RS07120	COG0047	phosphoribosylformylglycinamidine synthase activity
FYA05_RS07125	COG2205	protein histidine kinase activity
FYA05_RS07130	COG3170	Tfp pilus assembly protein FimV
FYA05_RS07135	COG2204	response regulator
FYA05_RS07140	COG0347	Belongs to the P(II) protein family
FYA05_RS07145	COG1017	nitric oxide dioxygenase activity
FYA05_RS07145	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FYA05_RS07155	COG1940	carbohydrate kinase activity
FYA05_RS07160	COG0457	Tetratricopeptide repeat
FYA05_RS07165	COG1879	ABC-type sugar transport system periplasmic component
FYA05_RS07170	COG1129	ABC transporter
FYA05_RS07175	COG1172	Belongs to the binding-protein-dependent transport system permease family
FYA05_RS07180	COG1063	alcohol dehydrogenase
FYA05_RS07185	COG2017	converts alpha-aldose to the beta-anomer
FYA05_RS07190	COG2259	Doxx family
FYA05_RS07215	COG4638	Rieske (2fe-2S)
FYA05_RS07220	COG0583	DNA-binding transcription factor activity
FYA05_RS07225	COG2814	Major facilitator Superfamily
FYA05_RS07230	COG3711	transcriptional antiterminator
FYA05_RS07235	COG1073	alpha beta
FYA05_RS07240	COG0483	inositol monophosphate 1-phosphatase activity
FYA05_RS07260	COG0822	iron-sulfur transferase activity
FYA05_RS07280	COG0633	Ferredoxin
FYA05_RS07285	COG2975	iron-sulfur cluster assembly
FYA05_RS07300	COG2897	thiosulfate sulfurtransferase activity
FYA05_RS07305	COG2373	Large extracellular alpha-helical protein
FYA05_RS07310	COG4953	penicillin-binding protein 1C
FYA05_RS07340	COG2976	Protein conserved in bacteria
FYA05_RS07345	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FYA05_RS07355	COG1645	bacterial-type flagellum-dependent swarming motility
FYA05_RS07365	COG0516	GMP reductase activity
FYA05_RS07365	COG0517	IMP dehydrogenase activity
FYA05_RS07380	COG3133	Outer membrane lipoprotein
FYA05_RS07390	COG2200	EAL domain
FYA05_RS07395	COG0248	Ppx GppA phosphatase
FYA05_RS07400	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
FYA05_RS07405	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FYA05_RS07420	COG2233	PERMEase
FYA05_RS07430	COG1393	Belongs to the ArsC family
FYA05_RS07435	COG4783	chaperone-mediated protein folding
FYA05_RS07440	COG0628	permease
FYA05_RS07445	COG2116	formate transmembrane transporter activity
FYA05_RS07450	COG3604	Transcriptional regulator
FYA05_RS07460	COG3260	NADH ubiquinone oxidoreductase 20
FYA05_RS07465	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYA05_RS07470	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
FYA05_RS07470	COG3261	NADH dehydrogenase
FYA05_RS07475	COG0651	ATP synthesis coupled electron transport
FYA05_RS07480	COG4237	Hydrogenase 4 membrane
FYA05_RS07485	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FYA05_RS07490	COG0650	Formate hydrogenlyase subunit 4
FYA05_RS07495	COG0651	ATP synthesis coupled electron transport
FYA05_RS07500	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA05_RS07505	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FYA05_RS07510	COG2716	regulation of RNA biosynthetic process
FYA05_RS07520	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
FYA05_RS07530	COG2321	neutral zinc metallopeptidase
FYA05_RS07535	COG1444	tRNA N-acetyltransferase activity
FYA05_RS07540	COG0400	carboxylic ester hydrolase activity
FYA05_RS07555	COG1393	Belongs to the ArsC family
FYA05_RS07565	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FYA05_RS07570	COG3850	Histidine kinase
FYA05_RS07575	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA05_RS07575	COG0493	'glutamate synthase
FYA05_RS07585	COG5342	invasion associated locus B
FYA05_RS07590	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FYA05_RS07595	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FYA05_RS07600	COG0281	malic enzyme
FYA05_RS07600	COG0280	phosphate acetyltransferase
FYA05_RS07605	COG4810	utilization protein
FYA05_RS07610	COG4917	ethanolamine utilization protein
FYA05_RS07615	COG4766	ethanolamine catabolic process
FYA05_RS07620	COG4812	Cobalamin adenosyltransferase
FYA05_RS07625	COG0280	phosphate acetyltransferase
FYA05_RS07630	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
FYA05_RS07635	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
FYA05_RS07640	COG1012	belongs to the aldehyde dehydrogenase family
FYA05_RS07645	COG4820	ethanolamine utilization protein (EutJ)
FYA05_RS07650	COG1454	alcohol dehydrogenase
FYA05_RS07655	COG3192	ethanolamine utilization protein
FYA05_RS07660	COG4819	ethanolamine utilization protein
FYA05_RS07665	COG4303	Ethanolamine ammonia lyase large subunit
FYA05_RS07675	COG4816	utilization protein
FYA05_RS07680	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
FYA05_RS07685	COG2207	Transcriptional regulator
FYA05_RS07695	COG0860	N-Acetylmuramoyl-L-alanine amidase
FYA05_RS07700	COG0456	acetyltransferase
FYA05_RS07715	COG2837	iron assimilation
FYA05_RS07720	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FYA05_RS07725	COG1263	PTS System
FYA05_RS07725	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYA05_RS07740	COG1028	Short-chain dehydrogenase reductase Sdr
FYA05_RS07745	COG4150	thiosulfate binding
FYA05_RS07750	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
FYA05_RS07755	COG4208	sulfate ABC transporter
FYA05_RS07760	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FYA05_RS07765	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FYA05_RS07770	COG4884	unkown
FYA05_RS07770	COG3831	ATPase activity
FYA05_RS07785	COG2190	(PTS) system
FYA05_RS07790	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FYA05_RS07795	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA05_RS07800	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FYA05_RS07820	COG3530	Putative quorum-sensing-regulated virulence factor
FYA05_RS07825	COG0385	Bile acid
FYA05_RS07830	COG0583	DNA-binding transcription factor activity
FYA05_RS07840	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
FYA05_RS07845	COG2211	Major facilitator Superfamily
FYA05_RS07855	COG0583	DNA-binding transcription factor activity
FYA05_RS07890	COG3415	Transposase
FYA05_RS07895	COG3415	Transposase
FYA05_RS07910	COG2200	EAL domain
FYA05_RS07910	COG2199	diguanylate cyclase activity
FYA05_RS07915	COG3385	transposase activity
FYA05_RS07920	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FYA05_RS07945	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYA05_RS07950	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYA05_RS07955	COG0006	proline dipeptidase activity
FYA05_RS07960	COG1363	Peptidase, m42
FYA05_RS07965	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA05_RS07965	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FYA05_RS07965	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA05_RS07970	COG2207	Transcriptional regulator
FYA05_RS07975	COG3279	Response regulator of the LytR AlgR family
FYA05_RS07980	COG3275	phosphorelay sensor kinase activity
FYA05_RS07985	COG0436	Aminotransferase
FYA05_RS07995	COG1560	Kdo2-lipid A biosynthetic process
FYA05_RS08020	COG0028	Belongs to the TPP enzyme family
FYA05_RS08025	COG0679	Auxin Efflux Carrier
FYA05_RS08030	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA05_RS08035	COG2198	Histidine kinase
FYA05_RS08035	COG2205	protein histidine kinase activity
FYA05_RS08035	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA05_RS08035	COG0784	Response regulator, receiver
FYA05_RS08040	COG2197	response regulator
FYA05_RS08045	COG1566	PFAM secretion protein HlyD family protein
FYA05_RS08050	COG0477	Major facilitator Superfamily
FYA05_RS08060	COG2610	gluconate transmembrane transporter activity
FYA05_RS08065	COG0583	DNA-binding transcription factor activity
FYA05_RS08085	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
FYA05_RS08090	COG5532	Uncharacterized conserved protein (DUF2303)
FYA05_RS08100	COG1846	Transcriptional regulator
FYA05_RS08110	COG4725	Belongs to the MT-A70-like family
FYA05_RS08150	COG2246	polysaccharide biosynthetic process
FYA05_RS08155	COG0582	viral genome integration into host DNA
FYA05_RS08165	COG2116	formate transmembrane transporter activity
FYA05_RS08170	COG2853	Lipoprotein
FYA05_RS08180	COG2067	long-chain fatty acid transport protein
FYA05_RS08185	COG3691	Protein conserved in bacteria
FYA05_RS08200	COG2062	phosphohistidine phosphatase, SixA
FYA05_RS08205	COG3539	Fimbrial protein
FYA05_RS08215	COG3121	Chaperone
FYA05_RS08220	COG3539	Fimbrial protein
FYA05_RS08225	COG3539	Fimbrial protein
FYA05_RS08230	COG3539	Fimbrial protein
FYA05_RS08245	COG2890	protein-(glutamine-N5) methyltransferase activity
FYA05_RS08260	COG0730	response to heat
FYA05_RS08265	COG3101	peptidyl-lysine hydroxylation
FYA05_RS08280	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FYA05_RS08285	COG2814	Major facilitator Superfamily
FYA05_RS08300	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FYA05_RS08310	COG0586	Pfam SNARE associated Golgi protein
FYA05_RS08320	COG0285	dihydrofolate synthase activity
FYA05_RS08325	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
FYA05_RS08330	COG1286	toxin biosynthetic process
FYA05_RS08335	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
FYA05_RS08340	COG0163	prenyltransferase activity
FYA05_RS08345	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA05_RS08350	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA05_RS08355	COG4215	(ABC) transporter
FYA05_RS08360	COG4160	amino acid transport
FYA05_RS08365	COG4598	ABC transporter
FYA05_RS08370	COG5464	transposase or invertase
FYA05_RS08375	COG1090	epimerase
FYA05_RS08380	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FYA05_RS08385	COG0625	glutathione transferase activity
FYA05_RS08390	COG0625	glutathione transferase activity
FYA05_RS08395	COG0622	Phosphoesterase
FYA05_RS08400	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
FYA05_RS08405	COG1288	antiporter activity
FYA05_RS08410	COG0280	phosphate acetyltransferase
FYA05_RS08410	COG0857	belongs to the CobB CobQ family
FYA05_RS08415	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FYA05_RS08430	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FYA05_RS08435	COG0471	metal ion transport
FYA05_RS08435	COG0490	domain, Protein
FYA05_RS08445	COG0436	Aminotransferase
FYA05_RS08450	COG0583	DNA-binding transcription factor activity
FYA05_RS08470	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
FYA05_RS08475	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
FYA05_RS08480	COG1034	ATP synthesis coupled electron transport
FYA05_RS08495	COG0839	Belongs to the complex I subunit 6 family
FYA05_RS08505	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FYA05_RS08510	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYA05_RS08520	COG0457	Tetratricopeptide repeat
FYA05_RS08540	COG2234	aminopeptidase activity
FYA05_RS08545	COG2304	oxidoreductase activity
FYA05_RS08550	COG5160	protein modification by small protein removal
FYA05_RS08560	COG2153	protein acetylation
FYA05_RS08565	COG4575	ribosome binding
FYA05_RS08570	COG1169	isochorismate synthase
FYA05_RS08585	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FYA05_RS08595	COG0318	PFAM AMP-dependent synthetase and ligase
FYA05_RS08660	COG1414	Transcriptional regulator
FYA05_RS08670	COG2271	Major facilitator Superfamily
FYA05_RS08685	COG5464	transposase or invertase
FYA05_RS08690	COG0247	lactate metabolic process
FYA05_RS08700	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FYA05_RS08705	COG2271	Major facilitator Superfamily
FYA05_RS08710	COG0584	glycerophosphoryl diester phosphodiesterase
FYA05_RS08720	COG3642	lipopolysaccharide core region biosynthetic process
FYA05_RS08725	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FYA05_RS08730	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FYA05_RS08735	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FYA05_RS08740	COG3468	outer membrane autotransporter barrel domain protein
FYA05_RS08750	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FYA05_RS08755	COG4685	Uncharacterized protein conserved in bacteria (DUF2138)
FYA05_RS08760	COG3234	Protein of unknown function (DUF1175)
FYA05_RS08770	COG5445	Predicted secreted protein (DUF2300)
FYA05_RS08775	COG4676	Protein conserved in bacteria
FYA05_RS08780	COG0183	Belongs to the thiolase family
FYA05_RS08785	COG2031	fatty acid transporter
FYA05_RS08790	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FYA05_RS08795	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
FYA05_RS08800	COG2204	response regulator
FYA05_RS08805	COG3852	Histidine kinase
FYA05_RS08810	COG0784	Response regulator, receiver
FYA05_RS08810	COG2205	protein histidine kinase activity
FYA05_RS08815	COG2197	response regulator
FYA05_RS08820	COG2198	Histidine kinase
FYA05_RS08820	COG0642	Histidine kinase
FYA05_RS08825	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FYA05_RS08830	COG1477	protein flavinylation
FYA05_RS08835	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FYA05_RS08835	COG2169	Transcriptional regulator
FYA05_RS08840	COG3145	DNA-N1-methyladenine dioxygenase activity
FYA05_RS08845	COG4615	Cyclic peptide transporter
FYA05_RS08860	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA05_RS08860	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA05_RS08865	COG3062	negative regulation of establishment of protein localization
FYA05_RS08875	COG0437	4 iron, 4 sulfur cluster binding
FYA05_RS08880	COG0348	domain, Protein
FYA05_RS08885	COG3043	anaerobic respiration
FYA05_RS08890	COG3005	denitrification pathway
FYA05_RS08895	COG4133	protoheme IX ABC transporter activity
FYA05_RS08900	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FYA05_RS08905	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FYA05_RS08910	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FYA05_RS08920	COG1138	Cytochrome C-type biogenesis protein
FYA05_RS08925	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FYA05_RS08930	COG3088	subunit of a heme lyase
FYA05_RS08930	COG4235	cytochrome complex assembly
FYA05_RS08935	COG2197	response regulator
FYA05_RS08955	COG3083	sulfuric ester hydrolase activity
FYA05_RS08975	COG1061	Type III restriction enzyme res subunit
FYA05_RS08980	COG1187	pseudouridine synthase activity
FYA05_RS08985	COG2814	Major facilitator Superfamily
FYA05_RS08995	COG4172	Belongs to the ABC transporter superfamily
FYA05_RS09000	COG4239	(ABC) transporter, permease
FYA05_RS09005	COG4174	ABC transporter (Permease)
FYA05_RS09010	COG4166	transmembrane transport
FYA05_RS09015	COG2200	EAL domain
FYA05_RS09020	COG0791	NLP P60 protein
FYA05_RS09025	COG0671	phosphoesterase, PA-phosphatase related
FYA05_RS09030	COG0523	cobalamin synthesis protein
FYA05_RS09035	COG0246	Mannitol dehydrogenase
FYA05_RS09050	COG2814	Major facilitator Superfamily
FYA05_RS09055	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA05_RS09055	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA05_RS09060	COG1105	Belongs to the carbohydrate kinase PfkB family
FYA05_RS09065	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYA05_RS09065	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYA05_RS09065	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
FYA05_RS09070	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYA05_RS09075	COG2313	pseudouridylate synthase activity
FYA05_RS09080	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FYA05_RS09085	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FYA05_RS09095	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FYA05_RS09100	COG1522	sequence-specific DNA binding
FYA05_RS09100	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYA05_RS09110	COG2855	membrane
FYA05_RS09115	COG0583	DNA-binding transcription factor activity
FYA05_RS09120	COG0833	amino acid
FYA05_RS09125	COG4771	TonB-dependent receptor
FYA05_RS09140	COG2311	Membrane
FYA05_RS09145	COG1609	Transcriptional regulator
FYA05_RS09150	COG1879	ABC-type sugar transport system periplasmic component
FYA05_RS09155	COG1129	ABC transporter
FYA05_RS09160	COG4211	Belongs to the binding-protein-dependent transport system permease family
FYA05_RS09165	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FYA05_RS09165	COG0167	dihydroorotate dehydrogenase activity
FYA05_RS09170	COG0493	'glutamate synthase
FYA05_RS09180	COG2949	membrane
FYA05_RS09190	COG1346	cytolysis
FYA05_RS09200	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FYA05_RS09215	COG1028	Short-chain dehydrogenase reductase Sdr
FYA05_RS09220	COG0586	Pfam SNARE associated Golgi protein
FYA05_RS09230	COG1686	Belongs to the peptidase S11 family
FYA05_RS09235	COG0277	FAD linked oxidase domain protein
FYA05_RS09240	COG1472	Belongs to the glycosyl hydrolase 3 family
FYA05_RS09245	COG1732	Glycine betaine
FYA05_RS09250	COG1174	glycine betaine transport
FYA05_RS09255	COG1125	glycine betaine transport
FYA05_RS09260	COG1174	glycine betaine transport
FYA05_RS09270	COG0789	Transcriptional regulator
FYA05_RS09275	COG3275	phosphorelay sensor kinase activity
FYA05_RS09280	COG3279	Response regulator of the LytR AlgR family
FYA05_RS09285	COG4807	Protein conserved in bacteria
FYA05_RS09290	COG4808	Protein conserved in bacteria
FYA05_RS09300	COG3552	Protein containing von Willebrand factor type A (VWA) domain
FYA05_RS09305	COG2425	protein containing a von Willebrand factor type A (vWA) domain
FYA05_RS09310	COG0714	Associated with various cellular activities
FYA05_RS09320	COG3831	ATPase activity
FYA05_RS09335	COG0489	protein tyrosine kinase activity
FYA05_RS09345	COG3539	Fimbrial protein
FYA05_RS09350	COG3121	Chaperone
FYA05_RS09355	COG3188	usher protein
FYA05_RS09360	COG3539	Fimbrial protein
FYA05_RS09365	COG5455	response to cobalt ion
FYA05_RS09370	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
FYA05_RS09385	COG0351	phosphomethylpyrimidine kinase
FYA05_RS09390	COG3757	hydrolase, family 25
FYA05_RS09395	COG2188	Transcriptional regulator
FYA05_RS09400	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYA05_RS09405	COG1397	ADP-ribosylglycohydrolase
FYA05_RS09410	COG2211	Major facilitator Superfamily
FYA05_RS09415	COG1830	Aldolase
FYA05_RS09435	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA05_RS09440	COG3414	Phosphotransferase system galactitol-specific IIB component
FYA05_RS09445	COG3775	system Galactitol-specific IIC component
FYA05_RS09450	COG1063	alcohol dehydrogenase
FYA05_RS09495	COG0826	peptidase U32
FYA05_RS09500	COG3422	double-strand break repair
FYA05_RS09505	COG0745	RESPONSE REGULATOR receiver
FYA05_RS09510	COG2205	protein histidine kinase activity
FYA05_RS09545	COG4245	von Willebrand factor, type A
FYA05_RS09550	COG0631	protein serine/threonine phosphatase activity
FYA05_RS09555	COG3779	Protein conserved in bacteria
FYA05_RS09560	COG4248	protein with protein kinase and helix-hairpin-helix DNA-binding domains
FYA05_RS09565	COG0443	Heat shock 70 kDa protein
FYA05_RS09570	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
FYA05_RS09575	COG5001	Diguanylate cyclase
FYA05_RS09575	COG5002	protein histidine kinase activity
FYA05_RS09575	COG3447	MASE1 domain protein
FYA05_RS09580	COG0572	uridine kinase
FYA05_RS09590	COG2982	Protein involved in outer membrane biogenesis
FYA05_RS09595	COG1253	flavin adenine dinucleotide binding
FYA05_RS09600	COG1596	polysaccharide export
FYA05_RS09605	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FYA05_RS09610	COG3206	protein involved in exopolysaccharide biosynthesis
FYA05_RS09610	COG0489	protein tyrosine kinase activity
FYA05_RS09615	COG0463	Glycosyl transferase, family 2
FYA05_RS09620	COG1045	serine acetyltransferase
FYA05_RS09625	COG0438	transferase activity, transferring glycosyl groups
FYA05_RS09635	COG1216	Glycosyl transferase, family 2
FYA05_RS09640	COG0110	maltose O-acetyltransferase activity
FYA05_RS09645	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
FYA05_RS09650	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FYA05_RS09655	COG1051	belongs to the nudix hydrolase family
FYA05_RS09660	COG0297	glycogen (starch) synthase activity
FYA05_RS09665	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
FYA05_RS09665	COG0662	Cupin 2, conserved barrel domain protein
FYA05_RS09670	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FYA05_RS09675	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FYA05_RS09680	COG2244	polysaccharide biosynthetic process
FYA05_RS09685	COG2327	Polysaccharide pyruvyl transferase
FYA05_RS09690	COG0438	transferase activity, transferring glycosyl groups
FYA05_RS09700	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FYA05_RS09705	COG1088	dTDP-glucose 4,6-dehydratase activity
FYA05_RS09715	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
FYA05_RS09720	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
FYA05_RS09725	COG2244	polysaccharide biosynthetic process
FYA05_RS09730	COG0562	UDP-galactopyranose mutase
FYA05_RS09740	COG0438	transferase activity, transferring glycosyl groups
FYA05_RS09745	COG0110	maltose O-acetyltransferase activity
FYA05_RS09750	COG0438	transferase activity, transferring glycosyl groups
FYA05_RS09770	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
FYA05_RS09775	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
FYA05_RS09780	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
FYA05_RS09785	COG0140	phosphoribosyl-ATP diphosphatase activity
FYA05_RS09785	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
FYA05_RS09800	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FYA05_RS09805	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FYA05_RS09805	COG0131	Imidazoleglycerol-phosphate dehydratase
FYA05_RS09815	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FYA05_RS09830	COG2161	toxin-antitoxin pair type II binding
FYA05_RS09835	COG4115	mRNA cleavage
FYA05_RS09840	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FYA05_RS09845	COG0583	DNA-binding transcription factor activity
FYA05_RS09855	COG0531	amino acid
FYA05_RS09860	COG2391	methyltransferase activity
FYA05_RS09865	COG0425	Belongs to the sulfur carrier protein TusA family
FYA05_RS09870	COG2925	Exonuclease
FYA05_RS09875	COG1686	Belongs to the peptidase S11 family
FYA05_RS09885	COG1289	transmembrane transporter activity
FYA05_RS09930	COG2003	Belongs to the UPF0758 family
FYA05_RS09935	COG2020	methyltransferase activity
FYA05_RS09940	COG3468	outer membrane autotransporter barrel domain protein
FYA05_RS09985	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
FYA05_RS10000	COG1376	ErfK ybiS ycfS ynhG family protein
FYA05_RS10010	COG0583	DNA-binding transcription factor activity
FYA05_RS10015	COG0583	DNA-binding transcription factor activity
FYA05_RS10025	COG0534	Mate efflux family protein
FYA05_RS10035	COG0217	transcriptional regulatory protein
FYA05_RS10040	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FYA05_RS10045	COG0477	Major facilitator Superfamily
FYA05_RS10055	COG1388	LysM domain
FYA05_RS10055	COG1470	cell adhesion involved in biofilm formation
FYA05_RS10075	COG3038	cytochrome b561
FYA05_RS10080	COG3443	Belongs to the bacterial solute-binding protein 9 family
FYA05_RS10095	COG2351	hydroxyisourate hydrolase activity
FYA05_RS10100	COG0745	RESPONSE REGULATOR receiver
FYA05_RS10105	COG2205	protein histidine kinase activity
FYA05_RS10130	COG1418	mRNA catabolic process
FYA05_RS10135	COG0270	DNA (cytosine-5-)-methyltransferase activity
FYA05_RS10140	COG3727	T/G mismatch-specific endonuclease activity
FYA05_RS10145	COG0697	spore germination
FYA05_RS10150	COG2354	Protein conserved in bacteria
FYA05_RS10155	COG5475	Uncharacterized small protein (DUF2158)
FYA05_RS10160	COG3706	GGDEF domain
FYA05_RS10185	COG2197	response regulator
FYA05_RS10190	COG1684	flagellar biosynthetic protein fliR
FYA05_RS10195	COG1987	bacterial-type flagellum assembly
FYA05_RS10200	COG1338	Plays a role in the flagellum-specific transport system
FYA05_RS10205	COG3190	flagellar
FYA05_RS10210	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FYA05_RS10215	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FYA05_RS10220	COG1580	Controls the rotational direction of flagella during chemotaxis
FYA05_RS10225	COG3144	bacterial-type flagellum assembly
FYA05_RS10230	COG2882	bacterial-type flagellum organization
FYA05_RS10235	COG1157	protein secretion by the type III secretion system
FYA05_RS10240	COG1317	bacterial-type flagellum organization
FYA05_RS10245	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FYA05_RS10250	COG1766	The M ring may be actively involved in energy transduction
FYA05_RS10275	COG0454	-acetyltransferase
FYA05_RS10280	COG2135	peptidase activity
FYA05_RS10285	COG0425	Belongs to the sulfur carrier protein TusA family
FYA05_RS10290	COG2391	methyltransferase activity
FYA05_RS10300	COG0366	Alpha amylase catalytic
FYA05_RS10310	COG1516	flagellar protein fliS
FYA05_RS10315	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
FYA05_RS10320	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FYA05_RS10325	COG1191	sigma factor activity
FYA05_RS10335	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA05_RS10345	COG0765	amino acid transport
FYA05_RS10350	COG1126	abc transporter atp-binding protein
FYA05_RS10355	COG2197	response regulator
FYA05_RS10370	COG2197	response regulator
FYA05_RS10400	COG3318	Belongs to the UPF0149 family
FYA05_RS10400	COG3012	SEC-C Motif Domain Protein
FYA05_RS10405	COG0814	amino acid
FYA05_RS10415	COG1528	Iron-storage protein
FYA05_RS10435	COG1528	Iron-storage protein
FYA05_RS10440	COG1879	ABC-type sugar transport system periplasmic component
FYA05_RS10445	COG1129	ABC transporter
FYA05_RS10450	COG1172	Belongs to the binding-protein-dependent transport system permease family
FYA05_RS10455	COG1877	trehalose-phosphatase activity
FYA05_RS10465	COG0589	response to stress
FYA05_RS10485	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FYA05_RS10490	COG1360	Flagellar Motor Protein
FYA05_RS10500	COG0835	chemotaxis
FYA05_RS10505	COG0840	transmembrane signaling receptor activity
FYA05_RS10510	COG0840	transmembrane signaling receptor activity
FYA05_RS10515	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FYA05_RS10520	COG2201	protein-glutamate methylesterase activity
FYA05_RS10525	COG0745	RESPONSE REGULATOR receiver
FYA05_RS10530	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
FYA05_RS10535	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FYA05_RS10540	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FYA05_RS10550	COG3755	Protein conserved in bacteria
FYA05_RS10560	COG3102	Protein conserved in bacteria
FYA05_RS10570	COG3005	denitrification pathway
FYA05_RS10575	COG0243	molybdopterin cofactor binding
FYA05_RS10590	COG3788	relative of glutathione S-transferase, MAPEG superfamily
FYA05_RS10595	COG1801	Protein of unknown function DUF72
FYA05_RS10600	COG1335	isochorismatase
FYA05_RS10610	COG0494	nUDIX hydrolase
FYA05_RS10615	COG0217	transcriptional regulatory protein
FYA05_RS10645	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FYA05_RS10655	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
FYA05_RS10660	COG0739	heme binding
FYA05_RS10665	COG1560	Kdo2-lipid A biosynthetic process
FYA05_RS10670	COG0469	pyruvate kinase activity
FYA05_RS10675	COG1737	Transcriptional regulator
FYA05_RS10680	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FYA05_RS10685	COG0129	dihydroxy-acid dehydratase activity
FYA05_RS10690	COG0800	Aldolase
FYA05_RS10700	COG3141	response to X-ray
FYA05_RS10710	COG2979	Protein of unknown function (DUF533)
FYA05_RS10715	COG1770	oligopeptidase
FYA05_RS10720	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FYA05_RS10725	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FYA05_RS10735	COG2372	response to copper ion
FYA05_RS10740	COG1276	copper resistance
FYA05_RS10750	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FYA05_RS10770	COG3008	intermembrane lipid transfer
FYA05_RS10775	COG2995	paraquat-inducible protein a
FYA05_RS10780	COG1956	GAF domain-containing protein
FYA05_RS10790	COG0793	Belongs to the peptidase S41A family
FYA05_RS10800	COG2814	Major facilitator Superfamily
FYA05_RS10805	COG1414	Transcriptional regulator
FYA05_RS10835	COG2226	methyltransferase
FYA05_RS10850	COG3716	PTS system mannose fructose sorbose family IID component
FYA05_RS10855	COG3715	PTS system
FYA05_RS10860	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYA05_RS10860	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA05_RS10865	COG1253	flavin adenine dinucleotide binding
FYA05_RS10870	COG2200	EAL domain
FYA05_RS10875	COG1760	l-serine dehydratase
FYA05_RS10885	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FYA05_RS10900	COG0251	oxidation-reduction process
FYA05_RS10905	COG1199	ATP-dependent helicase activity
FYA05_RS10910	COG1214	PFAM Peptidase M22, glycoprotease
FYA05_RS10915	COG3065	identical protein binding
FYA05_RS10920	COG0318	PFAM AMP-dependent synthetase and ligase
FYA05_RS10925	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
FYA05_RS10930	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FYA05_RS10935	COG4638	Rieske (2fe-2S)
FYA05_RS10940	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FYA05_RS10945	COG0473	3-isopropylmalate dehydrogenase activity
FYA05_RS10950	COG0583	DNA-binding transcription factor activity
FYA05_RS10960	COG3615	Tellurite resistance protein tehB
FYA05_RS10965	COG3385	transposase activity
FYA05_RS10980	COG2261	transglycosylase associated protein
FYA05_RS10995	COG2199	diguanylate cyclase activity
FYA05_RS10995	COG2203	Gaf domain
FYA05_RS11000	COG3042	response to heat
FYA05_RS11005	COG3189	MarR family transcriptional regulator
FYA05_RS11010	COG2807	transmembrane transport
FYA05_RS11015	COG2207	Transcriptional regulator
FYA05_RS11030	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FYA05_RS11035	COG2199	diguanylate cyclase activity
FYA05_RS11040	COG2199	diguanylate cyclase activity
FYA05_RS11050	COG2766	serine protein kinase
FYA05_RS11055	COG3713	MltA-interacting MipA family protein
FYA05_RS11060	COG0656	L-ascorbic acid biosynthetic process
FYA05_RS11065	COG0676	glucose-6-phosphate 1-epimerase activity
FYA05_RS11070	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FYA05_RS11080	COG3139	Protein of unknown function (DUF1315)
FYA05_RS11085	COG1063	alcohol dehydrogenase
FYA05_RS11090	COG2271	Major facilitator Superfamily
FYA05_RS11095	COG1063	alcohol dehydrogenase
FYA05_RS11100	COG0191	fructose-bisphosphate aldolase activity
FYA05_RS11105	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYA05_RS11110	COG0667	Aldo Keto reductase
FYA05_RS11115	COG1349	DNA-binding transcription factor activity
FYA05_RS11120	COG2814	Major facilitator Superfamily
FYA05_RS11125	COG1335	isochorismatase
FYA05_RS11130	COG0252	asparaginase activity
FYA05_RS11135	COG0616	signal peptide processing
FYA05_RS11140	COG0778	Nitroreductase
FYA05_RS11150	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FYA05_RS11160	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FYA05_RS11170	COG0494	nUDIX hydrolase
FYA05_RS11175	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FYA05_RS11180	COG2897	thiosulfate sulfurtransferase activity
FYA05_RS11185	COG4136	ATPase activity
FYA05_RS11190	COG4135	transport system, permease component
FYA05_RS11195	COG4134	Bacterial extracellular solute-binding protein
FYA05_RS11200	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYA05_RS11205	COG0398	Pfam SNARE associated Golgi protein
FYA05_RS11215	COG0398	Pfam SNARE associated Golgi protein
FYA05_RS11220	COG0708	Exodeoxyribonuclease III
FYA05_RS11250	COG3678	ATP-independent chaperone mediated protein folding
FYA05_RS11260	COG0322	excinuclease ABC activity
FYA05_RS11270	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FYA05_RS11275	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FYA05_RS11280	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FYA05_RS11285	COG1447	Phosphotransferase system cellobiose-specific component IIA
FYA05_RS11290	COG1917	Cupin 2, conserved barrel domain protein
FYA05_RS11290	COG2169	Transcriptional regulator
FYA05_RS11295	COG1486	melibiose metabolic process
FYA05_RS11305	COG0753	catalase activity
FYA05_RS11320	COG1823	symporter activity
FYA05_RS11325	COG1988	membrane-bound metal-dependent
FYA05_RS11330	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FYA05_RS11340	COG3001	Fructosamine kinase
FYA05_RS11350	COG1105	Belongs to the carbohydrate kinase PfkB family
FYA05_RS11355	COG3137	Salt-induced outer membrane protein
FYA05_RS11400	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FYA05_RS11400	COG0072	phenylalanine-tRNA ligase activity
FYA05_RS11415	COG0386	Belongs to the glutathione peroxidase family
FYA05_RS11425	COG0791	NLP P60 protein
FYA05_RS11430	COG2200	EAL domain
FYA05_RS11440	COG4256	Hemin uptake protein
FYA05_RS11445	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FYA05_RS11455	COG0574	Belongs to the PEP-utilizing enzyme family
FYA05_RS11455	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FYA05_RS11460	COG0318	PFAM AMP-dependent synthetase and ligase
FYA05_RS11465	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
FYA05_RS11470	COG0644	oxidoreductase
FYA05_RS11475	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
FYA05_RS11480	COG2086	electron transfer activity
FYA05_RS11485	COG2207	Transcriptional regulator
FYA05_RS11485	COG1917	Cupin 2, conserved barrel domain protein
FYA05_RS11490	COG1960	acyl-CoA dehydrogenase activity
FYA05_RS11495	COG4670	ketone body catabolic process
FYA05_RS11510	COG2271	Major facilitator Superfamily
FYA05_RS11515	COG0738	Major facilitator superfamily
FYA05_RS11530	COG0628	permease
FYA05_RS11535	COG0277	FAD linked oxidase domain protein
FYA05_RS11535	COG0247	lactate metabolic process
FYA05_RS11540	COG2050	protein possibly involved in aromatic compounds catabolism
FYA05_RS11550	COG0316	Belongs to the HesB IscA family
FYA05_RS11555	COG0719	Fe-S assembly protein
FYA05_RS11560	COG0396	ATPase activity
FYA05_RS11565	COG0719	Fe-S assembly protein
FYA05_RS11580	COG1376	ErfK ybiS ycfS ynhG family protein
FYA05_RS11585	COG4238	major outer membrane lipoprotein
FYA05_RS11590	COG0469	pyruvate kinase activity
FYA05_RS11600	COG0437	4 iron, 4 sulfur cluster binding
FYA05_RS11605	COG2414	aldehyde ferredoxin oxidoreductase
FYA05_RS11615	COG0437	4 iron, 4 sulfur cluster binding
FYA05_RS11620	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
FYA05_RS11630	COG4529	Protein conserved in bacteria
FYA05_RS11650	COG3468	outer membrane autotransporter barrel domain protein
FYA05_RS11660	COG0307	riboflavin synthase, alpha
FYA05_RS11665	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FYA05_RS11670	COG2814	Major facilitator Superfamily
FYA05_RS11675	COG0583	DNA-binding transcription factor activity
FYA05_RS11690	COG2814	Major facilitator Superfamily
FYA05_RS11695	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FYA05_RS11700	COG0791	NLP P60 protein
FYA05_RS11705	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FYA05_RS11710	COG1201	RNA secondary structure unwinding
FYA05_RS11715	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FYA05_RS11720	COG0346	lactoylglutathione lyase activity
FYA05_RS11725	COG1902	pentaerythritol trinitrate reductase activity
FYA05_RS11730	COG1309	transcriptional regulator
FYA05_RS11735	COG3313	Fe-S protein
FYA05_RS11740	COG4989	oxidoreductase activity
FYA05_RS11745	COG2032	superoxide dismutase activity
FYA05_RS11750	COG1289	transmembrane transporter activity
FYA05_RS11755	COG1566	PFAM secretion protein HlyD family protein
FYA05_RS11770	COG3133	Outer membrane lipoprotein
FYA05_RS11780	COG3895	Periplasmic Protein
FYA05_RS11795	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
FYA05_RS11800	COG0625	glutathione transferase activity
FYA05_RS11805	COG3104	oligopeptide transport
FYA05_RS11810	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FYA05_RS11820	COG4659	FMN binding
FYA05_RS11860	COG0673	inositol 2-dehydrogenase activity
FYA05_RS11870	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FYA05_RS11875	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYA05_RS11875	COG1263	PTS System
FYA05_RS11880	COG1609	Transcriptional regulator
FYA05_RS11885	COG1028	Short-chain dehydrogenase reductase Sdr
FYA05_RS11890	COG1309	transcriptional regulator
FYA05_RS11895	COG3250	beta-galactosidase activity
FYA05_RS11900	COG2211	Major facilitator Superfamily
FYA05_RS11910	COG5339	Protein conserved in bacteria
FYA05_RS11915	COG1482	cell wall glycoprotein biosynthetic process
FYA05_RS11920	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
FYA05_RS11920	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
FYA05_RS11925	COG0114	fumarate hydratase activity
FYA05_RS11935	COG2205	protein histidine kinase activity
FYA05_RS11940	COG0745	RESPONSE REGULATOR receiver
FYA05_RS11945	COG3136	membrane protein required for alginate biosynthesis
FYA05_RS11955	COG0531	amino acid
FYA05_RS11965	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
FYA05_RS11970	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
FYA05_RS11975	COG0628	permease
FYA05_RS11995	COG3591	Belongs to the peptidase S1B family
FYA05_RS12010	COG2814	Major facilitator Superfamily
FYA05_RS12015	COG0583	DNA-binding transcription factor activity
FYA05_RS12020	COG1940	carbohydrate kinase activity
FYA05_RS12025	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FYA05_RS12035	COG3381	protein complex oligomerization
FYA05_RS12040	COG3302	dmso reductase anchor subunit
FYA05_RS12045	COG0437	4 iron, 4 sulfur cluster binding
FYA05_RS12050	COG0243	molybdopterin cofactor binding
FYA05_RS12055	COG0243	molybdopterin cofactor binding
FYA05_RS12070	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FYA05_RS12085	COG4948	Mandelate Racemase Muconate Lactonizing
FYA05_RS12090	COG1063	alcohol dehydrogenase
FYA05_RS12140	COG1396	sequence-specific DNA binding
FYA05_RS12155	COG2801	Transposase and inactivated derivatives
FYA05_RS12170	COG3077	Addiction module antitoxin, RelB DinJ family
FYA05_RS12175	COG2026	Addiction module toxin, RelE StbE family
FYA05_RS12195	COG1403	HNH endonuclease
FYA05_RS12200	COG0484	heat shock protein binding
FYA05_RS12210	COG1278	Cold shock
FYA05_RS12215	COG1278	Cold shock
FYA05_RS12230	COG3772	lysozyme
FYA05_RS12240	COG1278	Cold shock
FYA05_RS12265	COG5562	phage envelope protein
FYA05_RS12275	COG4220	transposase activity
FYA05_RS12280	COG5301	cellulose 1,4-beta-cellobiosidase activity
FYA05_RS12285	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
FYA05_RS12290	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FYA05_RS12305	COG0477	Major facilitator Superfamily
FYA05_RS12310	COG0246	Mannitol dehydrogenase
FYA05_RS12320	COG1802	Transcriptional regulator
FYA05_RS12325	COG4221	oxidoreductase activity
FYA05_RS12330	COG0339	signal peptide processing
FYA05_RS12335	COG1546	Belongs to the CinA family
FYA05_RS12340	COG3111	PFAM Bacterial OB fold (BOF) protein
FYA05_RS12345	COG3706	GGDEF domain
FYA05_RS12355	COG2814	Major facilitator Superfamily
FYA05_RS12360	COG0697	spore germination
FYA05_RS12370	COG4977	sequence-specific DNA binding
FYA05_RS12375	COG1846	Transcriptional regulator
FYA05_RS12395	COG0583	DNA-binding transcription factor activity
FYA05_RS12400	COG1012	belongs to the aldehyde dehydrogenase family
FYA05_RS12405	COG2066	Belongs to the glutaminase family
FYA05_RS12415	COG2199	diguanylate cyclase activity
FYA05_RS12425	COG3781	membrane
FYA05_RS12490	COG1396	sequence-specific DNA binding
FYA05_RS12495	COG3550	peptidyl-serine autophosphorylation
FYA05_RS12510	COG3539	Fimbrial protein
FYA05_RS12515	COG3539	Fimbrial protein
FYA05_RS12520	COG3539	Fimbrial protein
FYA05_RS12525	COG0243	molybdopterin cofactor binding
FYA05_RS12535	COG2207	Transcriptional regulator
FYA05_RS12540	COG3119	arylsulfatase activity
FYA05_RS12545	COG0641	radical SAM
FYA05_RS12555	COG4178	(ABC) transporter
FYA05_RS12560	COG4771	TonB-dependent receptor
FYA05_RS12565	COG0612	Peptidase, M16
FYA05_RS12570	COG0076	glutamate decarboxylase activity
FYA05_RS12575	COG0531	amino acid
FYA05_RS12580	COG1649	PFAM Uncharacterised BCR, COG1649
FYA05_RS12585	COG3706	GGDEF domain
FYA05_RS12590	COG2199	diguanylate cyclase activity
FYA05_RS12590	COG2200	EAL domain
FYA05_RS12590	COG2202	Pas domain
FYA05_RS12595	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
FYA05_RS12600	COG0747	negative chemotaxis
FYA05_RS12605	COG0601	transmembrane transport
FYA05_RS12610	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA05_RS12615	COG0444	Belongs to the ABC transporter superfamily
FYA05_RS12620	COG4608	Belongs to the ABC transporter superfamily
FYA05_RS12625	COG1764	response to oxidative stress
FYA05_RS12645	COG1064	alcohol dehydrogenase
FYA05_RS12650	COG3093	addiction module antidote protein HigA
FYA05_RS12655	COG2864	formate dehydrogenase
FYA05_RS12660	COG0437	4 iron, 4 sulfur cluster binding
FYA05_RS12670	COG0697	spore germination
FYA05_RS12675	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FYA05_RS12685	COG2223	nitrite transmembrane transporter activity
FYA05_RS12690	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
FYA05_RS12695	COG1140	nitrate reductase beta subunit
FYA05_RS12700	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
FYA05_RS12705	COG2181	nitrate reductase activity
FYA05_RS12710	COG0384	phenazine biosynthesis protein PhzF
FYA05_RS12715	COG2162	N-hydroxyarylamine O-acetyltransferase activity
FYA05_RS12720	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FYA05_RS12730	COG5433	transposase activity
FYA05_RS12750	COG3209	COG3209 Rhs family protein
FYA05_RS12765	COG0625	glutathione transferase activity
FYA05_RS12770	COG1113	amino acid transport
FYA05_RS12775	COG3391	amine dehydrogenase activity
FYA05_RS12780	COG4772	TonB-dependent receptor
FYA05_RS12785	COG1802	Transcriptional regulator
FYA05_RS12790	COG2130	NADP-dependent
FYA05_RS12795	COG1247	-acetyltransferase
FYA05_RS12800	COG3238	Protein conserved in bacteria
FYA05_RS12825	COG1177	transmembrane transport
FYA05_RS12830	COG1176	ABC-type spermidine putrescine transport system, permease component I
FYA05_RS12835	COG3842	ATPase activity
FYA05_RS12840	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FYA05_RS12845	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FYA05_RS12850	COG1598	PFAM Uncharacterised protein family UPF0150
FYA05_RS12855	COG1724	mRNA binding
FYA05_RS12865	COG0826	peptidase U32
FYA05_RS12870	COG1396	sequence-specific DNA binding
FYA05_RS12875	COG3135	benzoate transporter
FYA05_RS12880	COG0675	Transposase, IS605 OrfB family
FYA05_RS12895	COG0500	methyltransferase
FYA05_RS12900	COG1275	C4-dicarboxylate transporter malic acid transport protein
FYA05_RS12905	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FYA05_RS12910	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FYA05_RS12915	COG2841	Protein conserved in bacteria
FYA05_RS12925	COG5383	Protein conserved in bacteria
FYA05_RS12930	COG0583	DNA-binding transcription factor activity
FYA05_RS12935	COG0840	transmembrane signaling receptor activity
FYA05_RS12950	COG3038	cytochrome b561
FYA05_RS12960	COG1012	belongs to the aldehyde dehydrogenase family
FYA05_RS12965	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FYA05_RS12970	COG1643	Atp-dependent helicase
FYA05_RS12980	COG0671	phosphoesterase, PA-phosphatase related
FYA05_RS12980	COG2453	phosphatase
FYA05_RS12985	COG2267	carboxylic ester hydrolase activity
FYA05_RS12990	COG4589	Belongs to the CDS family
FYA05_RS12995	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FYA05_RS13005	COG0667	Aldo Keto reductase
FYA05_RS13020	COG2826	transposase and inactivated derivatives, IS30 family
FYA05_RS13040	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FYA05_RS13045	COG3327	negative regulation of DNA-templated transcription, initiation
FYA05_RS13050	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
FYA05_RS13055	COG0183	Belongs to the thiolase family
FYA05_RS13060	COG2050	protein possibly involved in aromatic compounds catabolism
FYA05_RS13065	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYA05_RS13070	COG1024	Enoyl-CoA hydratase
FYA05_RS13075	COG1024	Enoyl-CoA hydratase
FYA05_RS13080	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FYA05_RS13085	COG2151	metal-sulfur cluster biosynthetic enzyme
FYA05_RS13090	COG3396	Phenylacetate-CoA oxygenase
FYA05_RS13095	COG3460	Phenylacetate-CoA oxygenase
FYA05_RS13100	COG3396	Phenylacetate-CoA oxygenase
FYA05_RS13105	COG2030	dehydratase
FYA05_RS13105	COG1012	belongs to the aldehyde dehydrogenase family
FYA05_RS13110	COG3733	amine oxidase
FYA05_RS13115	COG1012	belongs to the aldehyde dehydrogenase family
FYA05_RS13120	COG2207	Transcriptional regulator
FYA05_RS13125	COG3784	Protein of unknown function (DUF1318)
FYA05_RS13135	COG2911	Protein conserved in bacteria
FYA05_RS13140	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FYA05_RS13145	COG3187	Heat shock protein
FYA05_RS13150	COG3042	response to heat
FYA05_RS13155	COG1013	pyruvate-flavodoxin oxidoreductase activity
FYA05_RS13155	COG0674	pyruvate-flavodoxin oxidoreductase activity
FYA05_RS13155	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
FYA05_RS13155	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYA05_RS13160	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FYA05_RS13165	COG0589	response to stress
FYA05_RS13180	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FYA05_RS13185	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
FYA05_RS13190	COG5301	cellulose 1,4-beta-cellobiosidase activity
FYA05_RS13200	COG3039	Transposase
FYA05_RS13225	COG1475	DNA binding
FYA05_RS13230	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FYA05_RS13240	COG1846	Transcriptional regulator
FYA05_RS13245	COG1484	DNA-dependent DNA replication
FYA05_RS13250	COG3756	Protein conserved in bacteria
FYA05_RS13260	COG4197	protein conserved in bacteria, prophage-related
FYA05_RS13300	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FYA05_RS13305	COG3723	Recombinational DNA repair protein, rece pathway
FYA05_RS13325	COG0582	viral genome integration into host DNA
FYA05_RS13335	COG0513	Belongs to the DEAD box helicase family
FYA05_RS13345	COG3706	GGDEF domain
FYA05_RS13350	COG2840	Smr protein MutS2
FYA05_RS13355	COG0583	DNA-binding transcription factor activity
FYA05_RS13360	COG1473	amidohydrolase
FYA05_RS13365	COG1473	amidohydrolase
FYA05_RS13370	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
FYA05_RS13375	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FYA05_RS13380	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FYA05_RS13385	COG0589	response to stress
FYA05_RS13390	COG3182	Iron-regulated membrane protein
FYA05_RS13400	COG0668	transmembrane transport
FYA05_RS13405	COG4166	transmembrane transport
FYA05_RS13410	COG0583	DNA-binding transcription factor activity
FYA05_RS13415	COG1073	alpha beta
FYA05_RS13430	COG2866	Carboxypeptidase
FYA05_RS13435	COG4948	Mandelate Racemase Muconate Lactonizing
FYA05_RS13440	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
FYA05_RS13445	COG3283	Transcriptional regulator of aromatic amino acids metabolism
FYA05_RS13455	COG3106	COG3106 Predicted ATPase
FYA05_RS13460	COG1609	Transcriptional regulator
FYA05_RS13475	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FYA05_RS13480	COG1554	hydrolase, family 65, central catalytic
FYA05_RS13485	COG0673	inositol 2-dehydrogenase activity
FYA05_RS13490	COG1082	Xylose isomerase domain protein TIM barrel
FYA05_RS13495	COG1063	alcohol dehydrogenase
FYA05_RS13500	COG0395	ABC-type sugar transport system, permease component
FYA05_RS13505	COG1175	transmembrane transport
FYA05_RS13510	COG1653	transport
FYA05_RS13515	COG0366	Alpha amylase catalytic
FYA05_RS13520	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FYA05_RS13530	COG1983	PspC domain protein
FYA05_RS13540	COG1842	Phage shock protein A
FYA05_RS13545	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
FYA05_RS13550	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FYA05_RS13555	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYA05_RS13560	COG1012	belongs to the aldehyde dehydrogenase family
FYA05_RS13565	COG1917	Cupin 2, conserved barrel domain protein
FYA05_RS13565	COG1396	sequence-specific DNA binding
FYA05_RS13570	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
FYA05_RS13575	COG0174	glutamine synthetase
FYA05_RS13585	COG0531	amino acid
FYA05_RS13595	COG4166	transmembrane transport
FYA05_RS13600	COG4168	peptide transport system, permease
FYA05_RS13605	COG4171	peptide transport system, permease
FYA05_RS13610	COG4172	Belongs to the ABC transporter superfamily
FYA05_RS13615	COG4172	Belongs to the ABC transporter superfamily
FYA05_RS13620	COG2852	Protein conserved in bacteria
FYA05_RS13625	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FYA05_RS13630	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYA05_RS13630	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYA05_RS13645	COG5001	Diguanylate cyclase
FYA05_RS13655	COG1349	DNA-binding transcription factor activity
FYA05_RS13665	COG0023	Translation Initiation Factor
FYA05_RS13675	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
FYA05_RS13680	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
FYA05_RS13685	COG0671	phosphoesterase, PA-phosphatase related
FYA05_RS13695	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FYA05_RS13715	COG0583	DNA-binding transcription factor activity
FYA05_RS13720	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FYA05_RS13730	COG0616	signal peptide processing
FYA05_RS13735	COG1028	Short-chain dehydrogenase reductase Sdr
FYA05_RS13740	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
FYA05_RS13745	COG1187	pseudouridine synthase activity
FYA05_RS13750	COG4907	membrane protein (DUF2207)
FYA05_RS13755	COG0009	L-threonylcarbamoyladenylate synthase
FYA05_RS13760	COG0613	PHP domain protein
FYA05_RS13770	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FYA05_RS13775	COG0512	Glutamine amidotransferase of anthranilate synthase
FYA05_RS13775	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FYA05_RS13780	COG0134	indole-3-glycerol-phosphate synthase activity
FYA05_RS13780	COG0135	phosphoribosylanthranilate isomerase activity
FYA05_RS13795	COG3729	General stress protein
FYA05_RS13800	COG3685	Protein conserved in bacteria
FYA05_RS13805	COG3685	Protein conserved in bacteria
FYA05_RS13810	COG3047	cAMP biosynthetic process
FYA05_RS13830	COG1607	acyl-coa hydrolase
FYA05_RS13835	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
FYA05_RS13840	COG2350	Protein conserved in bacteria
FYA05_RS13845	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FYA05_RS13865	COG4608	Belongs to the ABC transporter superfamily
FYA05_RS13870	COG0444	Belongs to the ABC transporter superfamily
FYA05_RS13875	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA05_RS13880	COG0601	transmembrane transport
FYA05_RS13885	COG4166	transmembrane transport
FYA05_RS13890	COG2095	MarC family integral membrane protein
FYA05_RS13895	COG1454	alcohol dehydrogenase
FYA05_RS13895	COG1012	belongs to the aldehyde dehydrogenase family
FYA05_RS13905	COG1435	thymidine kinase activity
FYA05_RS13915	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FYA05_RS13920	COG0745	RESPONSE REGULATOR receiver
FYA05_RS13925	COG1752	Esterase of the alpha-beta hydrolase superfamily
FYA05_RS13935	COG0788	formyltetrahydrofolate deformylase activity
FYA05_RS13970	COG2181	nitrate reductase activity
FYA05_RS13975	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
FYA05_RS13980	COG1140	nitrate reductase beta subunit
FYA05_RS13985	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
FYA05_RS13990	COG2223	nitrite transmembrane transporter activity
FYA05_RS13995	COG3850	Histidine kinase
FYA05_RS14000	COG2197	response regulator
FYA05_RS14005	COG4932	domain protein
FYA05_RS14010	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
FYA05_RS14015	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
FYA05_RS14020	COG4572	Cation transport regulator
FYA05_RS14025	COG0387	Pfam Sodium calcium exchanger
FYA05_RS14065	COG2912	Transglutaminase-like superfamily
FYA05_RS14070	COG3094	Invasion gene expression up-regulator, SirB
FYA05_RS14075	COG2890	protein-(glutamine-N5) methyltransferase activity
FYA05_RS14100	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FYA05_RS14105	COG0659	secondary active sulfate transmembrane transporter activity
FYA05_RS14120	COG0012	GTP binding
FYA05_RS14125	COG3468	outer membrane autotransporter barrel domain protein
FYA05_RS14130	COG3284	Transcriptional regulator
FYA05_RS14135	COG2376	Dihydroxyacetone kinase
FYA05_RS14140	COG1461	Dihydroxyacetone kinase
FYA05_RS14145	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
FYA05_RS14145	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA05_RS14145	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FYA05_RS14160	COG2261	transglycosylase associated protein
FYA05_RS14165	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
FYA05_RS14175	COG1619	proteins homologs of microcin C7 resistance protein MccF
FYA05_RS14185	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FYA05_RS14195	COG2719	SpoVR family
FYA05_RS14210	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
FYA05_RS14215	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FYA05_RS14220	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FYA05_RS14235	COG0179	Fumarylacetoacetate (FAA) hydrolase
FYA05_RS14260	COG2894	cell division
FYA05_RS14310	COG2200	EAL domain
FYA05_RS14335	COG2200	EAL domain
FYA05_RS14340	COG0789	Transcriptional regulator
FYA05_RS14345	COG5562	phage envelope protein
FYA05_RS14360	COG0538	isocitrate dehydrogenase activity
FYA05_RS14365	COG1403	HNH endonuclease
FYA05_RS14370	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FYA05_RS14380	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
FYA05_RS14395	COG3778	Protein conserved in bacteria
FYA05_RS14400	COG3299	homolog of phage Mu protein gp47
FYA05_RS14405	COG4695	Portal protein
FYA05_RS14415	COG4626	Terminase
FYA05_RS14415	COG1802	Transcriptional regulator
FYA05_RS14430	COG4197	protein conserved in bacteria, prophage-related
FYA05_RS14435	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FYA05_RS14460	COG0582	viral genome integration into host DNA
FYA05_RS14475	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FYA05_RS14480	COG0538	isocitrate dehydrogenase activity
FYA05_RS14485	COG1187	pseudouridine synthase activity
FYA05_RS14505	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FYA05_RS14510	COG0745	RESPONSE REGULATOR receiver
FYA05_RS14515	COG2205	protein histidine kinase activity
FYA05_RS14520	COG2850	peptidyl-arginine hydroxylation
FYA05_RS14530	COG3842	ATPase activity
FYA05_RS14540	COG1177	transmembrane transport
FYA05_RS14545	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FYA05_RS14555	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
FYA05_RS14560	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FYA05_RS14570	COG4591	ABC-type transport system involved in lipoprotein release permease component
FYA05_RS14575	COG1136	(ABC) transporter
FYA05_RS14580	COG4591	ABC-type transport system involved in lipoprotein release permease component
FYA05_RS14585	COG4763	Acyl-transferase
FYA05_RS14590	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FYA05_RS14595	COG1376	ErfK ybiS ycfS ynhG family protein
FYA05_RS14595	COG1388	LysM domain
FYA05_RS14605	COG1309	transcriptional regulator
FYA05_RS14610	COG3134	Outer membrane lipoprotein
FYA05_RS14615	COG1252	NADH dehydrogenase
FYA05_RS14635	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
FYA05_RS14640	COG5633	Lipoprotein
FYA05_RS14645	COG0537	adenosine 5'-monophosphoramidase activity
FYA05_RS14650	COG4773	Receptor
FYA05_RS14655	COG1263	PTS System
FYA05_RS14655	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYA05_RS14660	COG0084	hydrolase, TatD family'
FYA05_RS14665	COG0470	DNA polymerase III
FYA05_RS14675	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FYA05_RS14680	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FYA05_RS14685	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FYA05_RS14695	COG1028	Short-chain dehydrogenase reductase Sdr
FYA05_RS14700	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
FYA05_RS14720	COG1399	metal-binding, possibly nucleic acid-binding protein
FYA05_RS14725	COG0424	maF-like protein
FYA05_RS14730	COG0564	pseudouridine synthase activity
FYA05_RS14735	COG1530	ribonuclease E activity
FYA05_RS14740	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FYA05_RS14745	COG1256	bacterial-type flagellum assembly
FYA05_RS14750	COG1705	Flagellar rod assembly protein muramidase FlgJ
FYA05_RS14750	COG3951	Flagellar rod assembly protein muramidase FlgJ
FYA05_RS14765	COG4786	Flagellar basal body rod
FYA05_RS14770	COG4787	bacterial-type flagellum-dependent cell motility
FYA05_RS14775	COG1749	Flagellar hook protein flgE
FYA05_RS14780	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
FYA05_RS14785	COG1558	bacterial-type flagellum-dependent cell motility
FYA05_RS14790	COG1815	bacterial-type flagellum-dependent cell motility
FYA05_RS14795	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
FYA05_RS14800	COG2747	anti-sigma28 factor FlgM
FYA05_RS14805	COG3418	PFAM FlgN family protein
FYA05_RS14810	COG0728	peptidoglycan biosynthetic process
FYA05_RS14815	COG0673	inositol 2-dehydrogenase activity
FYA05_RS14825	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FYA05_RS14835	COG2999	glutathione oxidoreductase activity
FYA05_RS14870	COG3038	cytochrome b561
FYA05_RS14875	COG2353	YceI-like domain
FYA05_RS14885	COG1560	Kdo2-lipid A biosynthetic process
FYA05_RS14900	COG5645	(Lipo)protein
FYA05_RS14905	COG2943	transferase activity, transferring hexosyl groups
FYA05_RS14920	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FYA05_RS14925	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
FYA05_RS14950	COG2197	response regulator
FYA05_RS14965	COG1462	curli production assembly transport component CsgG
FYA05_RS14975	COG3381	protein complex oligomerization
FYA05_RS15030	COG3706	GGDEF domain
FYA05_RS15035	COG0457	Tetratricopeptide repeat
FYA05_RS15040	COG1649	PFAM Uncharacterised BCR, COG1649
FYA05_RS15040	COG0726	polysaccharide deacetylase
FYA05_RS15045	COG1215	transferase activity, transferring glycosyl groups
FYA05_RS15050	COG3658	cytochrome
FYA05_RS15055	COG1702	phosphate starvation-inducible protein PhoH
FYA05_RS15060	COG2837	iron assimilation
FYA05_RS15065	COG2822	iron ion transport
FYA05_RS15075	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FYA05_RS15085	COG0506	proline dehydrogenase activity
FYA05_RS15085	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FYA05_RS15085	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FYA05_RS15090	COG1309	transcriptional regulator
FYA05_RS15130	COG2233	PERMEase
FYA05_RS15135	COG3729	General stress protein
FYA05_RS15170	COG3381	protein complex oligomerization
FYA05_RS15175	COG0243	molybdopterin cofactor binding
FYA05_RS15180	COG3005	denitrification pathway
FYA05_RS15185	COG0745	RESPONSE REGULATOR receiver
FYA05_RS15190	COG1879	ABC-type sugar transport system periplasmic component
FYA05_RS15195	COG0784	Response regulator, receiver
FYA05_RS15195	COG2205	protein histidine kinase activity
FYA05_RS15195	COG2198	Histidine kinase
FYA05_RS15200	COG0348	domain, Protein
FYA05_RS15220	COG1278	Cold shock
FYA05_RS15225	COG1278	Cold shock
FYA05_RS15250	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FYA05_RS15255	COG1596	polysaccharide export
FYA05_RS15260	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FYA05_RS15265	COG3206	protein involved in exopolysaccharide biosynthesis
FYA05_RS15265	COG0489	protein tyrosine kinase activity
FYA05_RS15280	COG1294	oxidase, subunit
FYA05_RS15285	COG1271	oxidase subunit
FYA05_RS15290	COG1773	rubredoxin
FYA05_RS15295	COG1999	signal sequence binding
FYA05_RS15300	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
FYA05_RS15305	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
FYA05_RS15310	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
FYA05_RS15315	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
FYA05_RS15325	COG0670	Belongs to the BI1 family
FYA05_RS15330	COG2920	part of a sulfur-relay system
FYA05_RS15335	COG1254	Belongs to the acylphosphatase family
FYA05_RS15350	COG1832	CoA-binding protein
FYA05_RS15365	COG0210	DNA helicase
FYA05_RS15370	COG3304	Inner membrane component domain
FYA05_RS15375	COG1289	transmembrane transporter activity
FYA05_RS15380	COG3070	regulator of competence-specific genes
FYA05_RS15390	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
FYA05_RS15390	COG2885	chlorophyll binding
FYA05_RS15400	COG1067	ATP-dependent peptidase activity
FYA05_RS15410	COG3130	regulation of translation
FYA05_RS15415	COG3009	Protein conserved in bacteria
FYA05_RS15420	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FYA05_RS15420	COG3008	intermembrane lipid transfer
FYA05_RS15425	COG2995	paraquat-inducible protein a
FYA05_RS15430	COG0488	(ABC) transporter
FYA05_RS15440	COG0633	Ferredoxin
FYA05_RS15440	COG3217	Mosc domain protein beta barrel domain protein
FYA05_RS15455	COG3121	Chaperone
FYA05_RS15460	COG3539	Fimbrial protein
FYA05_RS15465	COG3539	Fimbrial protein
FYA05_RS15470	COG3539	Fimbrial protein
FYA05_RS15475	COG3188	usher protein
FYA05_RS15480	COG3121	Chaperone
FYA05_RS15485	COG3539	Fimbrial protein
FYA05_RS15490	COG0431	NADPH-dependent FMN reductase
FYA05_RS15495	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FYA05_RS15505	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA05_RS15510	COG1116	anion transmembrane transporter activity
FYA05_RS15515	COG0308	aminopeptidase N
FYA05_RS15535	COG1448	Aminotransferase
FYA05_RS15540	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FYA05_RS15545	COG3108	Peptidase M15
FYA05_RS15550	COG2989	Protein conserved in bacteria
FYA05_RS15560	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
FYA05_RS15570	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FYA05_RS15575	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FYA05_RS15580	COG3173	Aminoglycoside phosphotransferase
FYA05_RS15595	COG3214	Protein conserved in bacteria
FYA05_RS15600	COG1663	tetraacyldisaccharide 4'-kinase activity
FYA05_RS15605	COG1132	(ABC) transporter
FYA05_RS15610	COG0658	competence protein
FYA05_RS15610	COG2333	competence protein COMEC
FYA05_RS15620	COG0539	negative regulation of cytoplasmic translation
FYA05_RS15630	COG0501	Belongs to the peptidase M48B family
FYA05_RS15645	COG2323	membrane
FYA05_RS15650	COG1944	ATP diphosphatase activity
FYA05_RS15655	COG2116	formate transmembrane transporter activity
FYA05_RS15660	COG1882	Formate acetyltransferase
FYA05_RS15665	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FYA05_RS15670	COG2249	NAD(P)H dehydrogenase (quinone) activity
FYA05_RS15675	COG0583	DNA-binding transcription factor activity
FYA05_RS15680	COG0531	amino acid
FYA05_RS15690	COG1335	isochorismatase
FYA05_RS15695	COG3302	dmso reductase anchor subunit
FYA05_RS15700	COG0437	4 iron, 4 sulfur cluster binding
FYA05_RS15705	COG0243	molybdopterin cofactor binding
FYA05_RS15715	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FYA05_RS15725	COG1178	ABC-type Fe3 transport system permease component
FYA05_RS15725	COG1674	ftsk spoiiie
FYA05_RS15730	COG1522	sequence-specific DNA binding
FYA05_RS15735	COG0492	ferredoxin-NADP+ reductase activity
FYA05_RS15740	COG4988	ABC transporter
FYA05_RS15745	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FYA05_RS15770	COG0542	response to heat
FYA05_RS15780	COG1278	Cold shock
FYA05_RS15785	COG0577	efflux transmembrane transporter activity
FYA05_RS15785	COG1136	(ABC) transporter
FYA05_RS15790	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA05_RS15795	COG2990	Protein conserved in bacteria
FYA05_RS15800	COG3593	DNA synthesis involved in DNA repair
FYA05_RS15810	COG2431	L-lysine efflux transmembrane transporter activity
FYA05_RS15820	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FYA05_RS15825	COG0028	Belongs to the TPP enzyme family
FYA05_RS15830	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
FYA05_RS15835	COG0702	epimerase
FYA05_RS15840	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FYA05_RS15845	COG3023	N-Acetylmuramoyl-L-alanine amidase
FYA05_RS15860	COG1126	abc transporter atp-binding protein
FYA05_RS15865	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA05_RS15870	COG4215	(ABC) transporter
FYA05_RS15875	COG4160	amino acid transport
FYA05_RS15880	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA05_RS15895	COG1177	transmembrane transport
FYA05_RS15900	COG1176	ABC-type spermidine putrescine transport system, permease component I
FYA05_RS15905	COG3842	ATPase activity
FYA05_RS15910	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FYA05_RS15925	COG0778	Nitroreductase
FYA05_RS15935	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FYA05_RS15950	COG3226	Transcriptional regulator
FYA05_RS15955	COG0738	Major facilitator superfamily
FYA05_RS15960	COG0561	phosphatase activity
FYA05_RS15970	COG2814	Major facilitator Superfamily
FYA05_RS15975	COG0671	phosphoesterase, PA-phosphatase related
FYA05_RS15980	COG1349	DNA-binding transcription factor activity
FYA05_RS15985	COG1686	Belongs to the peptidase S11 family
FYA05_RS15990	COG0625	glutathione transferase activity
FYA05_RS15995	COG2133	pyrroloquinoline quinone binding
FYA05_RS16010	COG2199	diguanylate cyclase activity
FYA05_RS16015	COG2200	EAL domain
FYA05_RS16020	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA05_RS16030	COG0747	negative chemotaxis
FYA05_RS16035	COG4172	Belongs to the ABC transporter superfamily
FYA05_RS16040	COG1446	asparaginase
FYA05_RS16045	COG0303	'Molybdopterin
FYA05_RS16050	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FYA05_RS16055	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FYA05_RS16060	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FYA05_RS16065	COG1882	Formate acetyltransferase
FYA05_RS16070	COG0561	phosphatase activity
FYA05_RS16080	COG0488	(ABC) transporter
FYA05_RS16085	COG1376	ErfK ybiS ycfS ynhG family protein
FYA05_RS16090	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FYA05_RS16095	COG1321	iron dependent repressor
FYA05_RS16105	COG2194	sulfuric ester hydrolase activity
FYA05_RS16110	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
FYA05_RS16120	COG5006	permease, DMT superfamily
FYA05_RS16130	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA05_RS16135	COG0765	amino acid transport
FYA05_RS16140	COG1126	abc transporter atp-binding protein
FYA05_RS16145	COG0668	transmembrane transport
FYA05_RS16160	COG4774	siderophore transport
FYA05_RS16170	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FYA05_RS16180	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FYA05_RS16185	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FYA05_RS16190	COG1199	ATP-dependent helicase activity
FYA05_RS16195	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
FYA05_RS16200	COG0513	Belongs to the DEAD box helicase family
FYA05_RS16205	COG1309	transcriptional regulator
FYA05_RS16215	COG1131	(ABC) transporter
FYA05_RS16220	COG0842	Transport permease protein
FYA05_RS16225	COG0842	Transport permease protein
FYA05_RS16235	COG3568	Endonuclease Exonuclease Phosphatase
FYA05_RS16240	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FYA05_RS16245	COG0392	lysyltransferase activity
FYA05_RS16250	COG0670	Belongs to the BI1 family
FYA05_RS16255	COG0670	Belongs to the BI1 family
FYA05_RS16260	COG0314	molybdopterin synthase activity
FYA05_RS16265	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
FYA05_RS16275	COG0521	Mo-molybdopterin cofactor biosynthetic process
FYA05_RS16285	COG0391	Required for morphogenesis under gluconeogenic growth conditions
FYA05_RS16295	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FYA05_RS16300	COG2226	methyltransferase
FYA05_RS16315	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FYA05_RS16320	COG1881	PFAM PEBP family protein
FYA05_RS16340	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
FYA05_RS16345	COG5301	cellulose 1,4-beta-cellobiosidase activity
FYA05_RS16380	COG1196	nuclear chromosome segregation
FYA05_RS16430	COG1030	water channel activity
FYA05_RS16450	COG4220	transposase activity
FYA05_RS16470	COG5562	phage envelope protein
FYA05_RS16505	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FYA05_RS16675	COG0582	viral genome integration into host DNA
FYA05_RS16680	COG4677	pectinesterase activity
FYA05_RS16685	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FYA05_RS16690	COG0471	metal ion transport
FYA05_RS16695	COG2828	Protein conserved in bacteria
FYA05_RS16700	COG0583	DNA-binding transcription factor activity
FYA05_RS16710	COG0561	phosphatase activity
FYA05_RS16715	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
FYA05_RS16720	COG4149	molybdate abc transporter
FYA05_RS16725	COG0725	ABC transporter, periplasmic molybdate-binding protein
FYA05_RS16735	COG3585	molybdate ion transport
FYA05_RS16735	COG2005	Transcriptional regulator
FYA05_RS16740	COG1119	ATPase activity
FYA05_RS16745	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FYA05_RS16750	COG1085	galactose-1-phosphate uridylyltransferase
FYA05_RS16760	COG2017	converts alpha-aldose to the beta-anomer
FYA05_RS16770	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FYA05_RS16780	COG1230	cation diffusion facilitator family transporter
FYA05_RS16785	COG3201	nicotinamide mononucleotide transporter
FYA05_RS16835	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
FYA05_RS16840	COG2885	chlorophyll binding
FYA05_RS16850	COG3064	Membrane
FYA05_RS16855	COG0848	biopolymer transport protein
FYA05_RS16860	COG0811	peptide transport
FYA05_RS16865	COG0824	Thioesterase
FYA05_RS16870	COG3790	cyd operon protein YbgE
FYA05_RS16875	COG4890	Cyd operon protein YbgT
FYA05_RS16880	COG1294	oxidase, subunit
FYA05_RS16885	COG1271	oxidase subunit
FYA05_RS16895	COG0383	alpha-mannosidase activity
FYA05_RS16900	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYA05_RS16900	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA05_RS16900	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYA05_RS16905	COG2188	Transcriptional regulator
FYA05_RS16910	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FYA05_RS16920	COG0508	dehydrogenase complex catalyzes the overall conversion of
FYA05_RS16925	COG0567	Dehydrogenase, E1 component
FYA05_RS16930	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FYA05_RS16935	COG1053	succinate dehydrogenase
FYA05_RS16940	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
FYA05_RS16945	COG2009	succinate dehydrogenase
FYA05_RS16955	COG0372	Belongs to the citrate synthase family
FYA05_RS16960	COG3539	Fimbrial protein
FYA05_RS16965	COG3188	usher protein
FYA05_RS16970	COG3121	Chaperone
FYA05_RS16975	COG3539	Fimbrial protein
FYA05_RS16980	COG3180	Ammonia monooxygenase
FYA05_RS16995	COG1984	allophanate hydrolase subunit 2
FYA05_RS17000	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FYA05_RS17005	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FYA05_RS17010	COG3104	oligopeptide transport
FYA05_RS17015	COG0415	Belongs to the DNA photolyase family
FYA05_RS17020	COG3272	Protein of unknown function (DUF1722)
FYA05_RS17055	COG3209	COG3209 Rhs family protein
FYA05_RS17085	COG2205	protein histidine kinase activity
FYA05_RS17090	COG0745	RESPONSE REGULATOR receiver
FYA05_RS17100	COG1982	Orn Lys Arg decarboxylase major
FYA05_RS17105	COG0531	amino acid
FYA05_RS17125	COG0033	Phosphoglucomutase
FYA05_RS17130	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
FYA05_RS17135	COG0596	Alpha beta hydrolase
FYA05_RS17145	COG0716	FMN binding
FYA05_RS17155	COG0735	belongs to the Fur family
FYA05_RS17175	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYA05_RS17175	COG2190	(PTS) system
FYA05_RS17175	COG1263	PTS System
FYA05_RS17185	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FYA05_RS17190	COG1846	Transcriptional regulator
FYA05_RS17190	COG1940	carbohydrate kinase activity
FYA05_RS17195	COG0647	UMP catabolic process
FYA05_RS17200	COG0367	asparagine synthase
FYA05_RS17235	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FYA05_RS17245	COG1702	phosphate starvation-inducible protein PhoH
FYA05_RS17255	COG4535	Mg2 and Co2 transporter CorC
FYA05_RS17260	COG0815	Transfers the fatty acyl group on membrane lipoproteins
FYA05_RS17270	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA05_RS17275	COG0765	amino acid transport
FYA05_RS17280	COG0765	amino acid transport
FYA05_RS17285	COG1126	abc transporter atp-binding protein
FYA05_RS17295	COG0443	Heat shock 70 kDa protein
FYA05_RS17300	COG2214	Heat shock protein DnaJ domain protein
FYA05_RS17310	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
FYA05_RS17315	COG2214	Heat shock protein DnaJ domain protein
FYA05_RS17325	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
FYA05_RS17330	COG2888	peptidyl-tyrosine sulfation
FYA05_RS17345	COG1466	dna polymerase III delta subunit
FYA05_RS17355	COG0406	alpha-ribazole phosphatase activity
FYA05_RS17360	COG0799	negative regulation of ribosome biogenesis
FYA05_RS17370	COG0768	penicillin binding
FYA05_RS17375	COG0772	Belongs to the SEDS family
FYA05_RS17380	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FYA05_RS17385	COG1686	Belongs to the peptidase S11 family
FYA05_RS17400	COG0583	DNA-binding transcription factor activity
FYA05_RS17410	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FYA05_RS17435	COG3069	C4-dicarboxylate transmembrane transporter activity
FYA05_RS17440	COG4565	transcriptional regulatory protein
FYA05_RS17445	COG3290	protein histidine kinase activity
FYA05_RS17450	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
FYA05_RS17460	COG2301	Belongs to the HpcH HpaI aldolase family
FYA05_RS17465	COG3051	citrate lyase alpha subunit
FYA05_RS17480	COG0471	metal ion transport
FYA05_RS17485	COG3719	Belongs to the RNase T2 family
FYA05_RS17490	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FYA05_RS17495	COG1063	alcohol dehydrogenase
FYA05_RS17500	COG0589	response to stress
FYA05_RS17505	COG3634	alkyl hydroperoxide reductase activity
FYA05_RS17510	COG0450	alkyl hydroperoxide reductase
FYA05_RS17515	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FYA05_RS17520	COG0583	DNA-binding transcription factor activity
FYA05_RS17525	COG3969	phosphoadenosine phosphosulfate
FYA05_RS17530	COG1475	DNA binding
FYA05_RS17535	COG0436	Aminotransferase
FYA05_RS17540	COG0371	Dehydrogenase
FYA05_RS17545	COG2879	small protein
FYA05_RS17550	COG1966	Carbon starvation protein
FYA05_RS17555	COG2050	protein possibly involved in aromatic compounds catabolism
FYA05_RS17560	COG1028	Short-chain dehydrogenase reductase Sdr
FYA05_RS17565	COG3433	isochorismatase activity
FYA05_RS17565	COG1535	isochorismatase
FYA05_RS17570	COG1021	2,3-dihydroxybenzoate-AMP ligase
FYA05_RS17575	COG1169	isochorismate synthase
FYA05_RS17580	COG4592	Periplasmic binding protein
FYA05_RS17590	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYA05_RS17595	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYA05_RS17600	COG1120	ATPase activity
FYA05_RS17605	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
FYA05_RS17610	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FYA05_RS17610	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
FYA05_RS17615	COG3251	PFAM MbtH domain protein
FYA05_RS17620	COG2382	esterase
FYA05_RS17625	COG4771	TonB-dependent receptor
FYA05_RS17630	COG2977	Belongs to the P-Pant transferase superfamily
FYA05_RS17635	COG3385	transposase activity
FYA05_RS17660	COG2315	Protein conserved in bacteria
FYA05_RS17665	COG0778	Nitroreductase
FYA05_RS17670	COG0668	transmembrane transport
FYA05_RS17675	COG1113	amino acid transport
FYA05_RS17680	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FYA05_RS17685	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA05_RS17690	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA05_RS17695	COG1538	Outer membrane efflux protein
FYA05_RS17700	COG0745	RESPONSE REGULATOR receiver
FYA05_RS17705	COG5002	protein histidine kinase activity
FYA05_RS17710	COG1215	transferase activity, transferring glycosyl groups
FYA05_RS17715	COG4783	chaperone-mediated protein folding
FYA05_RS17725	COG2207	Transcriptional regulator
FYA05_RS17730	COG4571	Outer membrane protease
FYA05_RS17735	COG2207	Transcriptional regulator
FYA05_RS17745	COG0500	methyltransferase
FYA05_RS17760	COG4220	transposase activity
FYA05_RS17775	COG5562	phage envelope protein
FYA05_RS17790	COG3772	lysozyme
FYA05_RS17845	COG2207	Transcriptional regulator
FYA05_RS17850	COG1881	PFAM PEBP family protein
FYA05_RS17855	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FYA05_RS17865	COG2076	Multidrug Resistance protein
FYA05_RS17895	COG0582	viral genome integration into host DNA
FYA05_RS17920	COG3539	Fimbrial protein
FYA05_RS17925	COG3539	Fimbrial protein
FYA05_RS17930	COG3188	usher protein
FYA05_RS17935	COG3121	Chaperone
FYA05_RS17940	COG3539	Fimbrial protein
FYA05_RS17950	COG2501	S4 domain
FYA05_RS17955	COG1988	membrane-bound metal-dependent
FYA05_RS17965	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FYA05_RS17975	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FYA05_RS17980	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FYA05_RS17985	COG0549	Belongs to the carbamate kinase family
FYA05_RS17995	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FYA05_RS18000	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FYA05_RS18005	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FYA05_RS18010	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FYA05_RS18015	COG3257	ureidoglycine aminohydrolase activity
FYA05_RS18020	COG1929	Belongs to the glycerate kinase type-1 family
FYA05_RS18025	COG2233	PERMEase
FYA05_RS18035	COG1953	Uracil, thiamine, allantoin
FYA05_RS18040	COG2084	Dehydrogenase
FYA05_RS18045	COG3622	Belongs to the hyi family
FYA05_RS18050	COG3960	tartronate-semialdehyde synthase activity
FYA05_RS18055	COG1414	Transcriptional regulator
FYA05_RS18065	COG0583	DNA-binding transcription factor activity
FYA05_RS18095	COG3209	COG3209 Rhs family protein
FYA05_RS18100	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
FYA05_RS18105	COG4181	ATPase activity
FYA05_RS18110	COG2755	lipolytic protein G-D-S-L family
FYA05_RS18115	COG0300	oxidoreductase activity
FYA05_RS18120	COG3118	belongs to the thioredoxin family
FYA05_RS18125	COG0390	transport system, permease component
FYA05_RS18130	COG4619	ABC transporter
FYA05_RS18135	COG0330	HflC and HflK could
FYA05_RS18140	COG1585	Membrane protein implicated in regulation of membrane protease activity
FYA05_RS18145	COG0789	Transcriptional regulator
FYA05_RS18150	COG0531	amino acid
FYA05_RS18155	COG2066	Belongs to the glutaminase family
FYA05_RS18160	COG2217	Heavy metal translocating P-type atpase
FYA05_RS18165	COG3093	addiction module antidote protein HigA
FYA05_RS18175	COG3735	TraB family
FYA05_RS18180	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FYA05_RS18185	COG0737	Belongs to the 5'-nucleotidase family
FYA05_RS18190	COG2223	nitrite transmembrane transporter activity
FYA05_RS18195	COG4651	solute:proton antiporter activity
FYA05_RS18195	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FYA05_RS18200	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYA05_RS18240	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FYA05_RS18250	COG2832	Protein of unknown function (DUF454)
FYA05_RS18255	COG3923	Primosomal replication protein n
FYA05_RS18265	COG1196	nuclear chromosome segregation
FYA05_RS18265	COG3264	Mechanosensitive ion channel
FYA05_RS18270	COG1309	transcriptional regulator
FYA05_RS18275	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA05_RS18280	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FYA05_RS18300	COG0110	maltose O-acetyltransferase activity
FYA05_RS18310	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FYA05_RS18315	COG5507	3-demethylubiquinone-9 3-methyltransferase
FYA05_RS18325	COG3695	enzyme binding
FYA05_RS18330	COG3126	Type III secretion system lipoprotein chaperone (YscW)
FYA05_RS18335	COG1946	Acyl-CoA thioesterase
FYA05_RS18340	COG0004	ammonium transporteR
FYA05_RS18345	COG0347	Belongs to the P(II) protein family
FYA05_RS18350	COG1132	(ABC) transporter
FYA05_RS18355	COG1132	(ABC) transporter
FYA05_RS18360	COG1522	sequence-specific DNA binding
FYA05_RS18370	COG4533	DNA binding
FYA05_RS18380	COG0824	Thioesterase
FYA05_RS18385	COG1555	photosystem II stabilization
FYA05_RS18390	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FYA05_RS18395	COG0776	regulation of translation
FYA05_RS18400	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FYA05_RS18420	COG0271	Belongs to the BolA IbaG family
FYA05_RS18425	COG3056	Lipoprotein
FYA05_RS18430	COG2223	nitrite transmembrane transporter activity
FYA05_RS18435	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FYA05_RS18440	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FYA05_RS18445	COG1845	cytochrome c oxidase, subunit III
FYA05_RS18450	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FYA05_RS18460	COG2814	Major facilitator Superfamily
FYA05_RS18470	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FYA05_RS18475	COG0693	protein deglycase activity
FYA05_RS18490	COG0142	geranyltranstransferase activity
FYA05_RS18500	COG0667	Aldo Keto reductase
FYA05_RS18505	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FYA05_RS18510	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
FYA05_RS18525	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FYA05_RS18525	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FYA05_RS18535	COG4238	major outer membrane lipoprotein
FYA05_RS18540	COG3248	Nucleoside-binding outer membrane protein
FYA05_RS18545	COG1403	HNH endonuclease
FYA05_RS18550	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FYA05_RS18555	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FYA05_RS18560	COG1862	Preprotein translocase
FYA05_RS18580	COG0366	Alpha amylase catalytic
FYA05_RS18585	COG1113	amino acid transport
FYA05_RS18590	COG1114	Component of the transport system for branched-chain amino acids
FYA05_RS18595	COG5002	protein histidine kinase activity
FYA05_RS18600	COG0745	RESPONSE REGULATOR receiver
FYA05_RS18605	COG0420	3'-5' exonuclease activity
FYA05_RS18610	COG0419	ATPase involved in DNA repair
FYA05_RS18615	COG2814	Major facilitator Superfamily
FYA05_RS18620	COG1940	carbohydrate kinase activity
FYA05_RS18645	COG4126	flavin adenine dinucleotide binding
FYA05_RS18665	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FYA05_RS18670	COG3706	GGDEF domain
FYA05_RS18680	COG1785	Belongs to the alkaline phosphatase family
FYA05_RS18690	COG1181	Belongs to the D-alanine--D-alanine ligase family
FYA05_RS18710	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
FYA05_RS18715	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FYA05_RS18720	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FYA05_RS18735	COG3468	outer membrane autotransporter barrel domain protein
FYA05_RS18740	COG0113	porphobilinogen synthase activity
FYA05_RS18745	COG2175	clavaminate synthase activity
FYA05_RS18750	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA05_RS18760	COG4521	taurine ABC transporter
FYA05_RS18765	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FYA05_RS18775	COG1215	transferase activity, transferring glycosyl groups
FYA05_RS18805	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
FYA05_RS18815	COG3122	Protein conserved in bacteria
FYA05_RS18820	COG2814	Major facilitator Superfamily
FYA05_RS18835	COG3971	2-oxopent-4-enoate hydratase activity
FYA05_RS18855	COG1414	Transcriptional regulator
FYA05_RS18860	COG1609	Transcriptional regulator
FYA05_RS18865	COG3250	beta-galactosidase activity
FYA05_RS18880	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FYA05_RS18915	COG2003	Belongs to the UPF0758 family
FYA05_RS18935	COG2378	regulation of single-species biofilm formation
FYA05_RS18955	COG3596	GTP binding
FYA05_RS18960	COG0583	DNA-binding transcription factor activity
FYA05_RS18975	COG2826	transposase and inactivated derivatives, IS30 family
FYA05_RS19000	COG0833	amino acid
FYA05_RS19005	COG2040	homocysteine
FYA05_RS19010	COG3842	ATPase activity
FYA05_RS19030	COG2963	transposase activity
FYA05_RS19040	COG3415	Transposase
FYA05_RS19040	COG2801	Transposase and inactivated derivatives
FYA05_RS19045	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FYA05_RS19050	COG0129	dihydroxy-acid dehydratase activity
FYA05_RS19055	COG2211	Major facilitator Superfamily
FYA05_RS19060	COG3507	Belongs to the glycosyl hydrolase 43 family
FYA05_RS19065	COG1414	Transcriptional regulator
FYA05_RS19070	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FYA05_RS19085	COG1061	Type III restriction enzyme res subunit
FYA05_RS19095	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FYA05_RS19115	COG0582	viral genome integration into host DNA
FYA05_RS19120	COG0583	DNA-binding transcription factor activity
FYA05_RS19125	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
FYA05_RS19130	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FYA05_RS19135	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
FYA05_RS19140	COG2080	2 iron, 2 sulfur cluster binding
FYA05_RS19145	COG3477	response to acidic pH
FYA05_RS19150	COG0727	PFAM Uncharacterised protein family (UPF0153)
FYA05_RS19155	COG3121	Chaperone
FYA05_RS19165	COG3188	usher protein
FYA05_RS19210	COG1388	LysM domain
FYA05_RS19230	COG3059	membrane
FYA05_RS19240	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FYA05_RS19245	COG2207	Transcriptional regulator
FYA05_RS19250	COG0247	lactate metabolic process
FYA05_RS19280	COG2195	Cleaves the N-terminal amino acid of tripeptides
FYA05_RS19285	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
FYA05_RS19290	COG1690	Belongs to the RtcB family
FYA05_RS19295	COG0454	-acetyltransferase
FYA05_RS19305	COG2161	toxin-antitoxin pair type II binding
FYA05_RS19325	COG1943	Transposase
FYA05_RS19330	COG0791	NLP P60 protein
FYA05_RS19335	COG3077	Addiction module antitoxin, RelB DinJ family
FYA05_RS19340	COG3041	Addiction module toxin RelE StbE family
FYA05_RS19345	COG3034	peptidoglycan biosynthetic process
FYA05_RS19350	COG0121	glutamine amidotransferase
FYA05_RS19360	COG1960	acyl-CoA dehydrogenase activity
FYA05_RS19370	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FYA05_RS19400	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FYA05_RS19410	COG2226	methyltransferase
FYA05_RS19420	COG1388	LysM domain
FYA05_RS19420	COG0741	lytic transglycosylase activity
FYA05_RS19425	COG2226	methyltransferase
FYA05_RS19435	COG0583	DNA-binding transcription factor activity
FYA05_RS19440	COG0656	L-ascorbic acid biosynthetic process
FYA05_RS19475	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FYA05_RS19480	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FYA05_RS19485	COG2011	ABC-type metal ion transport system permease component
FYA05_RS19490	COG1464	Belongs to the NlpA lipoprotein family
FYA05_RS19500	COG1720	tRNA m6t6A37 methyltransferase activity
FYA05_RS19510	COG0791	NLP P60 protein
FYA05_RS19515	COG3015	lipoprotein NlpE involved in copper resistance
FYA05_RS19520	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
FYA05_RS19525	COG4681	YaeQ
FYA05_RS19535	COG4568	rho-dependent transcription termination
FYA05_RS19540	COG0037	tRNA processing
FYA05_RS19545	COG0346	lactoylglutathione lyase activity
FYA05_RS19550	COG1982	Orn Lys Arg decarboxylase major
FYA05_RS19560	COG0587	DNA-directed DNA polymerase activity
FYA05_RS19585	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FYA05_RS19590	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
FYA05_RS19600	COG0750	zinc metalloprotease
FYA05_RS19605	COG0575	Belongs to the CDS family
FYA05_RS19610	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FYA05_RS19615	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FYA05_RS19640	COG0024	Methionine aminopeptidase
FYA05_RS19655	COG1408	metallophosphoesterase
FYA05_RS19670	COG3835	regulator
FYA05_RS19675	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FYA05_RS19690	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FYA05_RS19695	COG2860	membrane
FYA05_RS19720	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYA05_RS19725	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FYA05_RS19730	COG1120	ATPase activity
FYA05_RS19740	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FYA05_RS19745	COG1643	Atp-dependent helicase
FYA05_RS19750	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
FYA05_RS19760	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FYA05_RS19770	COG0617	tRNA 3'-terminal CCA addition
FYA05_RS19775	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FYA05_RS19780	COG3539	Fimbrial protein
FYA05_RS19785	COG3121	Chaperone
FYA05_RS19790	COG3188	usher protein
FYA05_RS19795	COG3539	Fimbrial protein
FYA05_RS19800	COG3539	Fimbrial protein
FYA05_RS19805	COG3539	Fimbrial protein
FYA05_RS19810	COG3539	Fimbrial protein
FYA05_RS19825	COG5464	transposase or invertase
FYA05_RS19835	COG0726	polysaccharide deacetylase
FYA05_RS19840	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA05_RS19845	COG0842	Transport permease protein
FYA05_RS19850	COG1131	(ABC) transporter
FYA05_RS19855	COG0288	reversible hydration of carbon dioxide
FYA05_RS19860	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
FYA05_RS19865	COG4993	Dehydrogenase
FYA05_RS19870	COG2132	Multicopper oxidase
FYA05_RS19895	COG1049	propionate catabolic process, 2-methylcitrate cycle
FYA05_RS19900	COG3064	Membrane
FYA05_RS19905	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FYA05_RS19910	COG0508	dehydrogenase complex catalyzes the overall conversion of
FYA05_RS19915	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
FYA05_RS19920	COG2186	Transcriptional regulator
FYA05_RS19925	COG1113	amino acid transport
FYA05_RS19930	COG3725	Membrane protein required for beta-lactamase induction
FYA05_RS19935	COG3023	N-Acetylmuramoyl-L-alanine amidase
FYA05_RS19940	COG0157	Belongs to the NadC ModD family
FYA05_RS19945	COG4969	Belongs to the N-Me-Phe pilin family
FYA05_RS19950	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FYA05_RS19955	COG1459	type II secretion system
FYA05_RS19965	COG0237	dephospho-CoA kinase activity
FYA05_RS19980	COG0494	nUDIX hydrolase
FYA05_RS20000	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FYA05_RS20005	COG0849	cell division
FYA05_RS20010	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FYA05_RS20015	COG1181	Belongs to the D-alanine--D-alanine ligase family
FYA05_RS20030	COG0772	Belongs to the SEDS family
FYA05_RS20035	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
FYA05_RS20045	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FYA05_RS20050	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FYA05_RS20055	COG0768	penicillin binding
FYA05_RS20060	COG3116	cell division
FYA05_RS20070	COG2001	Belongs to the MraZ family
FYA05_RS20075	COG1609	Transcriptional regulator
FYA05_RS20085	COG0440	acetolactate synthase activity
FYA05_RS20090	COG0028	Belongs to the TPP enzyme family
FYA05_RS20100	COG0583	DNA-binding transcription factor activity
FYA05_RS20115	COG0473	3-isopropylmalate dehydrogenase activity
FYA05_RS20130	COG2814	Major facilitator Superfamily
FYA05_RS20140	COG4533	DNA binding
FYA05_RS20145	COG4143	(ABC) transporter
FYA05_RS20150	COG1178	ABC-type Fe3 transport system permease component
FYA05_RS20155	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
FYA05_RS20160	COG0586	Pfam SNARE associated Golgi protein
FYA05_RS20165	COG4977	sequence-specific DNA binding
FYA05_RS20170	COG1069	ribulokinase activity
FYA05_RS20175	COG2160	L-arabinose isomerase activity
FYA05_RS20180	COG0235	Class ii aldolase
FYA05_RS20185	COG0417	DNA replication proofreading
FYA05_RS20195	COG0564	pseudouridine synthase activity
FYA05_RS20205	COG1357	PFAM Pentapeptide repeats (8 copies)
FYA05_RS20210	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FYA05_RS20215	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FYA05_RS20220	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FYA05_RS20245	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
FYA05_RS20260	COG2271	Major facilitator Superfamily
FYA05_RS20265	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
FYA05_RS20270	COG0644	oxidoreductase
FYA05_RS20320	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FYA05_RS20325	COG0505	Belongs to the CarA family
FYA05_RS20345	COG1047	Peptidyl-prolyl cis-trans
FYA05_RS20360	COG0196	riboflavin kinase activity
FYA05_RS20380	COG0583	DNA-binding transcription factor activity
FYA05_RS20385	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
FYA05_RS20395	COG3385	transposase activity
FYA05_RS20415	COG4735	regulation of single-species biofilm formation
FYA05_RS20420	COG1584	GPR1 FUN34 yaaH family protein
FYA05_RS20425	COG0521	Mo-molybdopterin cofactor biosynthetic process
FYA05_RS20430	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FYA05_RS20435	COG1115	amino acid carrier protein
FYA05_RS20450	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
FYA05_RS20460	COG0460	homoserine dehydrogenase
FYA05_RS20460	COG0527	aspartate kinase activity
FYA05_RS20470	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
FYA05_RS20480	COG0745	RESPONSE REGULATOR receiver
FYA05_RS20485	COG4452	Inner membrane protein CreD
FYA05_RS20490	COG2205	protein histidine kinase activity
FYA05_RS20495	COG0745	RESPONSE REGULATOR receiver
FYA05_RS20500	COG3045	CreA protein
FYA05_RS20505	COG2207	Transcriptional regulator
FYA05_RS20505	COG3708	Transcriptional regulator
FYA05_RS20525	COG0741	lytic transglycosylase activity
FYA05_RS20530	COG0488	(ABC) transporter
FYA05_RS20535	COG3172	ATPase kinase involved in NAD metabolism
FYA05_RS20535	COG1056	cytidyltransferase-related domain
FYA05_RS20540	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
FYA05_RS20545	COG0560	Phosphoserine phosphatase
FYA05_RS20550	COG3726	membrane protein affecting hemolysin expression
FYA05_RS20560	COG3550	peptidyl-serine autophosphorylation
FYA05_RS20585	COG1328	CTP reductase activity
FYA05_RS20590	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FYA05_RS20595	COG0084	hydrolase, TatD family'
FYA05_RS20600	COG4667	esterase of the alpha-beta hydrolase superfamily
FYA05_RS20610	COG2823	Periplasmic or secreted lipoprotein
FYA05_RS20620	COG1011	Hydrolase
FYA05_RS20625	COG0456	acetyltransferase
FYA05_RS20630	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
FYA05_RS20660	COG4114	ferric iron reductase
FYA05_RS20665	COG2197	response regulator
FYA05_RS20670	COG2197	response regulator
FYA05_RS20690	COG1484	DNA-dependent DNA replication
FYA05_RS20705	COG1063	alcohol dehydrogenase
FYA05_RS20710	COG1802	Transcriptional regulator
FYA05_RS20715	COG2271	Major facilitator Superfamily
FYA05_RS20720	COG0840	transmembrane signaling receptor activity
FYA05_RS20725	COG1966	Carbon starvation protein
FYA05_RS20730	COG2879	small protein
FYA05_RS20735	COG0523	cobalamin synthesis protein
FYA05_RS20740	COG1715	Restriction endonuclease
FYA05_RS20750	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
FYA05_RS20755	COG0732	type I restriction modification DNA specificity domain
FYA05_RS20765	COG1401	restriction endodeoxyribonuclease activity
FYA05_RS20770	COG4268	DNA restriction-modification system
FYA05_RS20780	COG1196	nuclear chromosome segregation
FYA05_RS20785	COG5457	Domain of unknown function (DUF1127)
FYA05_RS20790	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FYA05_RS20800	COG2814	Major facilitator Superfamily
FYA05_RS20805	COG2733	membrane
FYA05_RS20810	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
FYA05_RS20815	COG1924	4 iron, 4 sulfur cluster binding
FYA05_RS20825	COG3204	pilus organization
FYA05_RS20830	COG0477	Major facilitator Superfamily
FYA05_RS20840	COG3366	ferrous iron transmembrane transporter activity
FYA05_RS20845	COG0700	Nucleoside recognition
FYA05_RS20850	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FYA05_RS20855	COG0583	DNA-binding transcription factor activity
FYA05_RS20875	COG2186	Transcriptional regulator
FYA05_RS20880	COG0246	Mannitol dehydrogenase
FYA05_RS20890	COG2610	gluconate transmembrane transporter activity
FYA05_RS20895	COG3539	Fimbrial protein
FYA05_RS20900	COG3539	Fimbrial protein
FYA05_RS20905	COG3539	Fimbrial protein
FYA05_RS20910	COG3188	usher protein
FYA05_RS20915	COG3121	Chaperone
FYA05_RS20920	COG3539	Fimbrial protein
FYA05_RS20925	COG3539	Fimbrial protein
FYA05_RS20930	COG4974	Belongs to the 'phage' integrase family
FYA05_RS20940	COG0582	viral genome integration into host DNA
FYA05_RS20945	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FYA05_RS20950	COG3055	Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
FYA05_RS20960	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FYA05_RS20960	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
FYA05_RS20975	COG3153	acetyltransferase
FYA05_RS20980	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
FYA05_RS20990	COG1363	Peptidase, m42
FYA05_RS20995	COG3414	Phosphotransferase system galactitol-specific IIB component
FYA05_RS21000	COG3775	system Galactitol-specific IIC component
FYA05_RS21005	COG0434	BtpA family
FYA05_RS21010	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA05_RS21015	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FYA05_RS21020	COG1349	DNA-binding transcription factor activity
FYA05_RS21025	COG1414	Transcriptional regulator
FYA05_RS21030	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FYA05_RS21035	COG0129	dihydroxy-acid dehydratase activity
FYA05_RS21040	COG2610	gluconate transmembrane transporter activity
FYA05_RS21045	COG2390	Transcriptional regulator
FYA05_RS21055	COG1595	DNA-templated transcription, initiation
FYA05_RS21060	COG3712	iron ion homeostasis
FYA05_RS21065	COG4772	TonB-dependent receptor
FYA05_RS21070	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
FYA05_RS21075	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYA05_RS21080	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYA05_RS21085	COG1120	ATPase activity
FYA05_RS21090	COG2085	NADP oxidoreductase coenzyme F420-dependent
FYA05_RS21105	COG2826	transposase and inactivated derivatives, IS30 family
FYA05_RS21130	COG0673	inositol 2-dehydrogenase activity
FYA05_RS21135	COG2814	Major facilitator Superfamily
FYA05_RS21140	COG3385	transposase activity
FYA05_RS21180	COG1064	alcohol dehydrogenase
FYA05_RS21185	COG3265	gluconokinase activity
FYA05_RS21190	COG1063	alcohol dehydrogenase
FYA05_RS21195	COG1028	Short-chain dehydrogenase reductase Sdr
FYA05_RS21200	COG2610	gluconate transmembrane transporter activity
FYA05_RS21205	COG1609	Transcriptional regulator
FYA05_RS21210	COG0433	COG0433 Predicted ATPase
FYA05_RS21215	COG0795	lipopolysaccharide-transporting ATPase activity
FYA05_RS21220	COG0795	lipopolysaccharide-transporting ATPase activity
FYA05_RS21230	COG2927	DNA polymerase III (CHI subunit)
FYA05_RS21235	COG0525	valine-tRNA ligase activity
FYA05_RS21240	COG4269	membrane
FYA05_RS21245	COG0456	acetyltransferase
FYA05_RS21250	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
FYA05_RS21255	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FYA05_RS21265	COG2731	YhcH YjgK YiaL family protein
FYA05_RS21270	COG1309	transcriptional regulator
FYA05_RS21275	COG1028	Short-chain dehydrogenase reductase Sdr
FYA05_RS21280	COG0251	oxidation-reduction process
FYA05_RS21300	COG0251	oxidation-reduction process
FYA05_RS21305	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FYA05_RS21315	COG1609	Transcriptional regulator
FYA05_RS21320	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYA05_RS21320	COG1263	PTS System
FYA05_RS21325	COG0366	Alpha amylase catalytic
FYA05_RS21330	COG1328	CTP reductase activity
FYA05_RS21335	COG0602	queuosine metabolic process
FYA05_RS21340	COG3783	Cytochrome b(562)
FYA05_RS21345	COG0312	modulator of DNA gyrase
FYA05_RS21355	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FYA05_RS21365	COG1172	Belongs to the binding-protein-dependent transport system permease family
FYA05_RS21370	COG1172	Belongs to the binding-protein-dependent transport system permease family
FYA05_RS21375	COG1129	ABC transporter
FYA05_RS21380	COG1879	ABC-type sugar transport system periplasmic component
FYA05_RS21385	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
FYA05_RS21390	COG2337	Toxic component of a toxin-antitoxin (TA) module
FYA05_RS21395	COG2336	PFAM SpoVT AbrB
FYA05_RS21400	COG2105	PFAM AIG2 family protein
FYA05_RS21405	COG2911	Protein conserved in bacteria
FYA05_RS21410	COG0729	surface antigen
FYA05_RS21420	COG1253	flavin adenine dinucleotide binding
FYA05_RS21430	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
FYA05_RS21440	COG1218	3'(2'),5'-bisphosphate nucleotidase
FYA05_RS21445	COG0737	Belongs to the 5'-nucleotidase family
FYA05_RS21450	COG1733	regulation of RNA biosynthetic process
FYA05_RS21455	COG0702	epimerase
FYA05_RS21460	COG0697	spore germination
FYA05_RS21470	COG1113	amino acid transport
FYA05_RS21475	COG0545	Peptidyl-prolyl cis-trans isomerase
FYA05_RS21480	COG3061	Opacity-associated protein A
FYA05_RS21500	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
FYA05_RS21535	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA05_RS21540	COG3414	Phosphotransferase system galactitol-specific IIB component
FYA05_RS21545	COG3037	sugar-specific permease SgaT UlaA
FYA05_RS21560	COG1073	alpha beta
FYA05_RS21565	COG3650	response to hydrogen peroxide
FYA05_RS21575	COG1960	acyl-CoA dehydrogenase activity
FYA05_RS21580	COG0754	glutathionylspermidine amidase activity
FYA05_RS21585	COG5463	Belongs to the UPF0441 family
FYA05_RS21590	COG3766	membrane
FYA05_RS21600	COG1842	Phage shock protein A
FYA05_RS21605	COG3789	protein conserved in bacteria
FYA05_RS21610	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FYA05_RS21615	COG0557	exoribonuclease II activity
FYA05_RS21630	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
FYA05_RS21635	COG0330	HflC and HflK could
FYA05_RS21640	COG0330	HflC and HflK could
FYA05_RS21645	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FYA05_RS21665	COG0860	N-Acetylmuramoyl-L-alanine amidase
FYA05_RS21670	COG0802	atpase or kinase
FYA05_RS21675	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
FYA05_RS21675	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FYA05_RS21680	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FYA05_RS21720	COG3264	Mechanosensitive ion channel
FYA05_RS21720	COG1511	domain protein
FYA05_RS21735	COG0531	amino acid
FYA05_RS21745	COG1053	succinate dehydrogenase
FYA05_RS21750	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FYA05_RS21765	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FYA05_RS21770	COG3040	lipid binding
FYA05_RS21775	COG2076	Multidrug Resistance protein
FYA05_RS21780	COG5510	response to toxic substance
FYA05_RS21785	COG5510	response to toxic substance
FYA05_RS21795	COG1509	lysine 2,3-aminomutase activity
FYA05_RS21820	COG0531	amino acid
FYA05_RS21825	COG3030	protein affecting phage T7 exclusion by the F plasmid
FYA05_RS21830	COG1027	Aspartate ammonia-lyase
FYA05_RS21835	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FYA05_RS21845	COG4232	protein-disulfide reductase activity
FYA05_RS21850	COG1309	transcriptional regulator
FYA05_RS21860	COG3710	Transcriptional regulator
FYA05_RS21865	COG0531	amino acid
FYA05_RS21870	COG1982	Orn Lys Arg decarboxylase major
FYA05_RS21875	COG3104	oligopeptide transport
FYA05_RS21880	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FYA05_RS21895	COG2388	GCN5-related N-acetyl-transferase
FYA05_RS21900	COG3592	Divergent 4Fe-4S mono-cluster
FYA05_RS21905	COG3290	protein histidine kinase activity
FYA05_RS21910	COG4565	transcriptional regulatory protein
FYA05_RS21915	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FYA05_RS21920	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
FYA05_RS21920	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
FYA05_RS21925	COG3647	Membrane
FYA05_RS21930	COG2211	Major facilitator Superfamily
FYA05_RS21935	COG1486	melibiose metabolic process
FYA05_RS21940	COG2169	Transcriptional regulator
FYA05_RS21945	COG1982	Orn Lys Arg decarboxylase major
FYA05_RS21950	COG2207	Transcriptional regulator
FYA05_RS21955	COG0531	amino acid
FYA05_RS21960	COG2194	sulfuric ester hydrolase activity
FYA05_RS21965	COG0745	RESPONSE REGULATOR receiver
FYA05_RS21970	COG0642	Histidine kinase
FYA05_RS21980	COG0477	Major facilitator Superfamily
FYA05_RS21990	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
FYA05_RS21995	COG2824	Alkylphosphonate utilization operon protein PhnA
FYA05_RS22000	COG2764	glyoxalase bleomycin resistance protein dioxygenase
FYA05_RS22005	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FYA05_RS22010	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
FYA05_RS22020	COG2188	Transcriptional regulator
FYA05_RS22025	COG3624	Phosphonate C-P lyase system protein PhnG
FYA05_RS22030	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
FYA05_RS22035	COG3626	phosphonate metabolism
FYA05_RS22040	COG3627	carbon phosphorus lyase activity
FYA05_RS22045	COG4107	phosphonate C-P lyase system protein PhnK
FYA05_RS22050	COG4778	phosphonate C-P lyase system protein PhnL
FYA05_RS22055	COG3454	Phosphonate metabolism
FYA05_RS22060	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
FYA05_RS22065	COG0456	acetyltransferase
FYA05_RS22070	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
FYA05_RS22080	COG0698	ribose 5-phosphate isomerase
FYA05_RS22085	COG1737	Transcriptional regulator
FYA05_RS22090	COG1879	ABC-type sugar transport system periplasmic component
FYA05_RS22095	COG1129	ABC transporter
FYA05_RS22100	COG1172	Belongs to the binding-protein-dependent transport system permease family
FYA05_RS22105	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FYA05_RS22110	COG1940	carbohydrate kinase activity
FYA05_RS22115	COG2015	COG2015, Alkyl sulfatase and related hydrolases
FYA05_RS22125	COG1566	PFAM secretion protein HlyD family protein
FYA05_RS22130	COG1289	transmembrane transporter activity
FYA05_RS22135	COG1538	Outer membrane efflux protein
FYA05_RS22145	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
FYA05_RS22150	COG1301	dicarboxylic acid transport
FYA05_RS22155	COG4235	cytochrome complex assembly
FYA05_RS22160	COG3088	subunit of a heme lyase
FYA05_RS22165	COG1138	Cytochrome C-type biogenesis protein
FYA05_RS22170	COG3301	Polysulphide reductase, NrfD
FYA05_RS22175	COG0437	4 iron, 4 sulfur cluster binding
FYA05_RS22180	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
FYA05_RS22190	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FYA05_RS22195	COG3162	membrane
FYA05_RS22205	COG1357	PFAM Pentapeptide repeats (8 copies)
FYA05_RS22210	COG0025	NhaP-type Na H and K H
FYA05_RS22215	COG2252	PERMEase
FYA05_RS22220	COG0789	Transcriptional regulator
FYA05_RS22225	COG2207	Transcriptional regulator
FYA05_RS22230	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FYA05_RS22240	COG0629	single-stranded DNA binding
FYA05_RS22245	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FYA05_RS22250	COG2315	Protein conserved in bacteria
FYA05_RS22255	COG0432	Pfam Uncharacterised protein family UPF0047
FYA05_RS22260	COG3700	Belongs to the class B bacterial acid phosphatase family
FYA05_RS22270	COG1448	Aminotransferase
FYA05_RS22275	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FYA05_RS22280	COG0305	Participates in initiation and elongation during chromosome replication
FYA05_RS22285	COG0604	alcohol dehydrogenase
FYA05_RS22295	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FYA05_RS22310	COG0735	belongs to the Fur family
FYA05_RS22315	COG3237	CsbD-like
FYA05_RS22320	COG0534	Mate efflux family protein
FYA05_RS22330	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FYA05_RS22365	COG3842	ATPase activity
FYA05_RS22370	COG2182	Extracellular solute-binding protein
FYA05_RS22375	COG1175	transmembrane transport
FYA05_RS22380	COG3833	ABC-type maltose transport systems, permease component
FYA05_RS22385	COG0477	Major facilitator Superfamily
FYA05_RS22385	COG2814	Major facilitator Superfamily
FYA05_RS22400	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FYA05_RS22425	COG0527	aspartate kinase activity
FYA05_RS22435	COG1187	pseudouridine synthase activity
FYA05_RS22445	COG1283	sodium-dependent phosphate transmembrane transporter activity
FYA05_RS22450	COG0646	methionine synthase
FYA05_RS22450	COG1410	methionine synthase
FYA05_RS22455	COG1414	Transcriptional regulator
FYA05_RS22470	COG2224	Isocitrate lyase
FYA05_RS22475	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FYA05_RS22485	COG0456	acetyltransferase
FYA05_RS22660	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FYA05_RS22775	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FYA05_RS22795	COG2274	protein secretion by the type I secretion system
FYA05_RS22795	COG3271	cysteine-type peptidase activity
FYA05_RS22805	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
FYA05_RS22830	COG3451	type IV secretory pathway VirB4
FYA05_RS22870	COG2026	Addiction module toxin, RelE StbE family
FYA05_RS22935	COG0330	HflC and HflK could