locus-tag class description FYA08_RS00005 PF00308 Bacterial dnaA protein FYA08_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix FYA08_RS00005 PF11638 DnaA N-terminal domain FYA08_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain FYA08_RS00010 PF02767 DNA polymerase III beta subunit, central domain FYA08_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain FYA08_RS00015 PF02463 RecF/RecN/SMC N terminal domain FYA08_RS00020 PF01751 Toprim domain FYA08_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS00020 PF18053 DNA gyrase B subunit insert domain FYA08_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus FYA08_RS00020 PF00204 DNA gyrase B FYA08_RS00025 PF06078 Bacterial protein of unknown function (DUF937) FYA08_RS00040 PF07729 FCD domain FYA08_RS00040 PF00392 Bacterial regulatory proteins, gntR family FYA08_RS00045 PF05035 2-keto-3-deoxy-galactonokinase FYA08_RS00050 PF01081 KDPG and KHG aldolase FYA08_RS00055 PF13378 Enolase C-terminal domain-like FYA08_RS00055 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FYA08_RS00060 PF07690 Major Facilitator Superfamily FYA08_RS00065 PF01494 FAD binding domain FYA08_RS00070 PF07676 WD40-like Beta Propeller Repeat FYA08_RS00070 PF12566 Protein of unknown function (DUF3748) FYA08_RS00075 PF07119 Protein of unknown function (DUF1375) FYA08_RS00080 PF00011 Hsp20/alpha crystallin family FYA08_RS00085 PF00011 Hsp20/alpha crystallin family FYA08_RS00090 PF02080 TrkA-C domain FYA08_RS00090 PF06826 Predicted Permease Membrane Region FYA08_RS00095 PF07702 UTRA domain FYA08_RS00095 PF00392 Bacterial regulatory proteins, gntR family FYA08_RS00100 PF02378 Phosphotransferase system, EIIC FYA08_RS00105 PF00367 phosphotransferase system, EIIB FYA08_RS00115 PF12833 Helix-turn-helix domain FYA08_RS00115 PF02311 AraC-like ligand binding domain FYA08_RS00120 PF00474 Sodium:solute symporter family FYA08_RS00125 PF00884 Sulfatase FYA08_RS00125 PF16347 Domain of unknown function (DUF4976) FYA08_RS00135 PF02656 Domain of unknown function (DUF202) FYA08_RS00140 PF02656 Domain of unknown function (DUF202) FYA08_RS00150 PF07690 Major Facilitator Superfamily FYA08_RS00155 PF13939 Toxin TisB, type I toxin-antitoxin system FYA08_RS00160 PF08049 IlvB leader peptide FYA08_RS00165 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FYA08_RS00165 PF00205 Thiamine pyrophosphate enzyme, central domain FYA08_RS00165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FYA08_RS00170 PF01842 ACT domain FYA08_RS00175 PF00072 Response regulator receiver domain FYA08_RS00175 PF00196 Bacterial regulatory proteins, luxR family FYA08_RS00180 PF07730 Histidine kinase FYA08_RS00180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS00180 PF05231 MASE1 FYA08_RS00185 PF07690 Major Facilitator Superfamily FYA08_RS00190 PF07690 Major Facilitator Superfamily FYA08_RS00195 PF13382 Adenine deaminase C-terminal domain FYA08_RS00195 PF01979 Amidohydrolase family FYA08_RS00200 PF00860 Permease family FYA08_RS00205 PF06711 Protein of unknown function (DUF1198) FYA08_RS00210 PF07690 Major Facilitator Superfamily FYA08_RS00220 PF03180 NLPA lipoprotein FYA08_RS00225 PF00892 EamA-like transporter family FYA08_RS00230 PF07690 Major Facilitator Superfamily FYA08_RS00250 PF01055 Glycosyl hydrolases family 31 FYA08_RS00250 PF13802 Galactose mutarotase-like FYA08_RS00255 PF05170 AsmA family FYA08_RS00260 PF00860 Permease family FYA08_RS00265 PF03616 Sodium/glutamate symporter FYA08_RS00270 PF00271 Helicase conserved C-terminal domain FYA08_RS00270 PF17191 RecG wedge domain FYA08_RS00270 PF00270 DEAD/DEAH box helicase FYA08_RS00275 PF12105 SpoU, rRNA methylase, C-terminal FYA08_RS00275 PF00588 SpoU rRNA Methylase family FYA08_RS00280 PF02824 TGS domain FYA08_RS00280 PF04607 Region found in RelA / SpoT proteins FYA08_RS00280 PF13291 ACT domain FYA08_RS00285 PF01192 RNA polymerase Rpb6 FYA08_RS00290 PF00625 Guanylate kinase FYA08_RS00295 PF01653 NAD-dependent DNA ligase adenylation domain FYA08_RS00295 PF03120 NAD-dependent DNA ligase OB-fold domain FYA08_RS00300 PF03458 UPF0126 domain FYA08_RS00310 PF03755 YicC-like family, N-terminal region FYA08_RS00310 PF08340 Domain of unknown function (DUF1732) FYA08_RS00315 PF03725 3' exoribonuclease family, domain 2 FYA08_RS00315 PF01138 3' exoribonuclease family, domain 1 FYA08_RS00320 PF00156 Phosphoribosyl transferase domain FYA08_RS00325 PF00440 Bacterial regulatory proteins, tetR family FYA08_RS00330 PF00692 dUTPase FYA08_RS00335 PF04127 DNA / pantothenate metabolism flavoprotein FYA08_RS00335 PF02441 Flavoprotein FYA08_RS00340 PF04002 RadC-like JAB domain FYA08_RS00345 PF00830 Ribosomal L28 family FYA08_RS00350 PF00471 Ribosomal protein L33 FYA08_RS00355 PF06827 Zinc finger found in FPG and IleRS FYA08_RS00355 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FYA08_RS00355 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FYA08_RS00360 PF01467 Cytidylyltransferase-like FYA08_RS00365 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FYA08_RS00370 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FYA08_RS00375 PF00534 Glycosyl transferases group 1 FYA08_RS00375 PF13439 Glycosyltransferase Family 4 FYA08_RS00390 PF13439 Glycosyltransferase Family 4 FYA08_RS00390 PF00534 Glycosyl transferases group 1 FYA08_RS00395 PF01501 Glycosyl transferase family 8 FYA08_RS00395 PF08437 Glycosyl transferase family 8 C-terminal FYA08_RS00400 PF01501 Glycosyl transferase family 8 FYA08_RS00400 PF08437 Glycosyl transferase family 8 C-terminal FYA08_RS00405 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) FYA08_RS00415 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FYA08_RS00420 PF04932 O-Antigen ligase FYA08_RS00425 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FYA08_RS00430 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FYA08_RS00435 PF01370 NAD dependent epimerase/dehydratase family FYA08_RS00440 PF09612 Bacterial protein of unknown function (HtrL_YibB) FYA08_RS00445 PF00155 Aminotransferase class I and II FYA08_RS00450 PF00107 Zinc-binding dehydrogenase FYA08_RS00450 PF08240 Alcohol dehydrogenase GroES-like domain FYA08_RS00455 PF00535 Glycosyl transferase family 2 FYA08_RS00460 PF04748 Divergent polysaccharide deacetylase FYA08_RS00465 PF01551 Peptidase family M23 FYA08_RS00470 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FYA08_RS00470 PF01676 Metalloenzyme superfamily FYA08_RS00475 PF00581 Rhodanese-like domain FYA08_RS00480 PF00462 Glutaredoxin FYA08_RS00485 PF02556 Preprotein translocase subunit SecB FYA08_RS00490 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FYA08_RS00490 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FYA08_RS00495 PF00132 Bacterial transferase hexapeptide (six repeats) FYA08_RS00495 PF06426 Serine acetyltransferase, N-terminal FYA08_RS00500 PF00588 SpoU rRNA Methylase family FYA08_RS00505 PF01070 FMN-dependent dehydrogenase FYA08_RS00510 PF00392 Bacterial regulatory proteins, gntR family FYA08_RS00510 PF07729 FCD domain FYA08_RS00515 PF02652 L-lactate permease FYA08_RS00520 PF10928 Protein of unknown function (DUF2810) FYA08_RS00530 PF05068 Mannitol repressor FYA08_RS00535 PF08125 Mannitol dehydrogenase C-terminal domain FYA08_RS00535 PF01232 Mannitol dehydrogenase Rossmann domain FYA08_RS00540 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FYA08_RS00540 PF02378 Phosphotransferase system, EIIC FYA08_RS00540 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FYA08_RS00545 PF11742 Protein of unknown function (DUF3302) FYA08_RS00550 PF00529 HlyD membrane-fusion protein of T1SS FYA08_RS00550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FYA08_RS00555 PF15596 Immunity protein 57 FYA08_RS00580 PF03130 PBS lyase HEAT-like repeat FYA08_RS00585 PF05593 RHS Repeat FYA08_RS00585 PF03527 RHS protein FYA08_RS00585 PF15606 Bacterial toxin 34 FYA08_RS00590 PF13417 Glutathione S-transferase, N-terminal domain FYA08_RS00590 PF00043 Glutathione S-transferase, C-terminal domain FYA08_RS00595 PF12390 Selenocysteine synthase N terminal FYA08_RS00595 PF03841 L-seryl-tRNA selenium transferase FYA08_RS00600 PF03144 Elongation factor Tu domain 2 FYA08_RS00600 PF09106 Elongation factor SelB, winged helix FYA08_RS00600 PF09107 Elongation factor SelB, winged helix FYA08_RS00600 PF00009 Elongation factor Tu GTP binding domain FYA08_RS00605 PF00465 Iron-containing alcohol dehydrogenase FYA08_RS00610 PF00171 Aldehyde dehydrogenase family FYA08_RS00620 PF11742 Protein of unknown function (DUF3302) FYA08_RS00625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FYA08_RS00625 PF00529 HlyD membrane-fusion protein of T1SS FYA08_RS00630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS00630 PF03466 LysR substrate binding domain FYA08_RS00635 PF06629 MltA-interacting protein MipA FYA08_RS00645 PF00596 Class II Aldolase and Adducin N-terminal domain FYA08_RS00650 PF01261 Xylose isomerase-like TIM barrel FYA08_RS00655 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FYA08_RS00660 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FYA08_RS00660 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FYA08_RS00665 PF03480 Bacterial extracellular solute-binding protein, family 7 FYA08_RS00670 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FYA08_RS00675 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FYA08_RS00680 PF04074 YhcH/YjgK/YiaL FYA08_RS00685 PF02615 Malate/L-lactate dehydrogenase FYA08_RS00690 PF01614 Bacterial transcriptional regulator FYA08_RS00690 PF09339 IclR helix-turn-helix domain FYA08_RS00695 PF13247 4Fe-4S dicluster domain FYA08_RS00700 PF00155 Aminotransferase class I and II FYA08_RS00705 PF00128 Alpha amylase, catalytic domain FYA08_RS00710 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FYA08_RS00715 PF12833 Helix-turn-helix domain FYA08_RS00720 PF02653 Branched-chain amino acid transport system / permease component FYA08_RS00725 PF00005 ABC transporter FYA08_RS00730 PF13407 Periplasmic binding protein domain FYA08_RS00740 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FYA08_RS00740 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FYA08_RS00745 PF05360 yiaA/B two helix domain FYA08_RS00750 PF05360 yiaA/B two helix domain FYA08_RS00755 PF01757 Acyltransferase family FYA08_RS00760 PF13983 YsaB-like lipoprotein FYA08_RS00765 PF02091 Glycyl-tRNA synthetase alpha subunit FYA08_RS00770 PF05746 DALR anticodon binding domain FYA08_RS00770 PF02092 Glycyl-tRNA synthetase beta subunit FYA08_RS00780 PF01848 Hok/gef family FYA08_RS00785 PF00313 'Cold-shock' DNA-binding domain FYA08_RS00790 PF01381 Helix-turn-helix FYA08_RS00795 PF11254 Protein of unknown function (DUF3053) FYA08_RS00800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FYA08_RS00800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FYA08_RS00805 PF00691 OmpA family FYA08_RS00805 PF13488 Glycine zipper FYA08_RS00810 PF01568 Molydopterin dinucleotide binding domain FYA08_RS00810 PF18364 Molybdopterin oxidoreductase N-terminal domain FYA08_RS00810 PF00384 Molybdopterin oxidoreductase FYA08_RS00815 PF00583 Acetyltransferase (GNAT) family FYA08_RS00820 PF03352 Methyladenine glycosylase FYA08_RS00825 PF03797 Autotransporter beta-domain FYA08_RS00830 PF07690 Major Facilitator Superfamily FYA08_RS00835 PF08019 Phosphoethanolamine transferase EptA/EptB FYA08_RS00835 PF00884 Sulfatase FYA08_RS00860 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS00865 PF12911 N-terminal TM domain of oligopeptide transport permease C FYA08_RS00865 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS00870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FYA08_RS00870 PF00005 ABC transporter FYA08_RS00875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FYA08_RS00875 PF00005 ABC transporter FYA08_RS00880 PF03222 Tryptophan/tyrosine permease family FYA08_RS00890 PF13940 Toxin Ldr, type I toxin-antitoxin system FYA08_RS00895 PF11658 Cellulose biosynthesis protein BcsG FYA08_RS00900 PF11120 Cellulose biosynthesis protein BcsF FYA08_RS00905 PF10995 Cellulose biosynthesis GIL FYA08_RS00910 PF10945 Cellulose biosynthesis protein BcsR FYA08_RS00915 PF06564 Cellulose biosynthesis protein BcsQ FYA08_RS00920 PF03552 Cellulose synthase FYA08_RS00920 PF00535 Glycosyl transferase family 2 FYA08_RS00920 PF07238 PilZ domain FYA08_RS00925 PF03170 Bacterial cellulose synthase subunit FYA08_RS00930 PF01270 Glycosyl hydrolases family 8 FYA08_RS00935 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) FYA08_RS00940 PF00672 HAMP domain FYA08_RS00940 PF00563 EAL domain FYA08_RS00940 PF00990 Diguanylate cyclase, GGDEF domain FYA08_RS00940 PF17154 Gammaproteobacterial periplasmic sensor domain FYA08_RS00945 PF00375 Sodium:dicarboxylate symporter family FYA08_RS00950 PF05193 Peptidase M16 inactive domain FYA08_RS00950 PF00675 Insulinase (Peptidase family M16) FYA08_RS00955 PF00294 pfkB family carbohydrate kinase FYA08_RS00960 PF00563 EAL domain FYA08_RS00965 PF05170 AsmA family FYA08_RS00970 PF07690 Major Facilitator Superfamily FYA08_RS00970 PF00083 Sugar (and other) transporter FYA08_RS00975 PF03631 Virulence factor BrkB FYA08_RS00980 PF03466 LysR substrate binding domain FYA08_RS00980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS00985 PF00196 Bacterial regulatory proteins, luxR family FYA08_RS00990 PF01204 Trehalase FYA08_RS00995 PF03150 Di-haem cytochrome c peroxidase FYA08_RS00995 PF00034 Cytochrome c FYA08_RS00995 PF14376 Haem-binding domain FYA08_RS01000 PF00282 Pyridoxal-dependent decarboxylase conserved domain FYA08_RS01005 PF12833 Helix-turn-helix domain FYA08_RS01010 PF12833 Helix-turn-helix domain FYA08_RS01015 PF00873 AcrB/AcrD/AcrF family FYA08_RS01020 PF00529 HlyD membrane-fusion protein of T1SS FYA08_RS01020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FYA08_RS01030 PF00196 Bacterial regulatory proteins, luxR family FYA08_RS01035 PF03729 Short repeat of unknown function (DUF308) FYA08_RS01040 PF06411 HdeA/HdeB family FYA08_RS01045 PF06411 HdeA/HdeB family FYA08_RS01050 PF02308 MgtC family FYA08_RS01055 PF00196 Bacterial regulatory proteins, luxR family FYA08_RS01060 PF03843 Outer membrane lipoprotein Slp family FYA08_RS01070 PF01609 Transposase DDE domain FYA08_RS01070 PF05598 Transposase domain (DUF772) FYA08_RS01080 PF03960 ArsC family FYA08_RS01085 PF02040 Arsenical pump membrane protein FYA08_RS01090 PF01022 Bacterial regulatory protein, arsR family FYA08_RS01100 PF07992 Pyridine nucleotide-disulphide oxidoreductase FYA08_RS01100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FYA08_RS01105 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FYA08_RS01110 PF01432 Peptidase family M3 FYA08_RS01115 PF04445 Putative SAM-dependent methyltransferase FYA08_RS01120 PF00854 POT family FYA08_RS01125 PF00582 Universal stress protein family FYA08_RS01130 PF10625 Universal stress protein B (UspB) FYA08_RS01135 PF01384 Phosphate transporter family FYA08_RS01145 PF10951 Protein of unknown function (DUF2776) FYA08_RS01155 PF13258 Domain of unknown function (DUF4049) FYA08_RS01160 PF13533 Biotin-lipoyl like FYA08_RS01165 PF00005 ABC transporter FYA08_RS01175 PF01609 Transposase DDE domain FYA08_RS01175 PF13808 DDE_Tnp_1-associated FYA08_RS01180 PF03130 PBS lyase HEAT-like repeat FYA08_RS01185 PF15631 NTF2 fold immunity protein FYA08_RS01190 PF05593 RHS Repeat FYA08_RS01190 PF03527 RHS protein FYA08_RS01190 PF14220 Domain of unknown function (DUF4329) FYA08_RS01195 PF01402 Ribbon-helix-helix protein, copG family FYA08_RS01195 PF08753 NikR C terminal nickel binding domain FYA08_RS01200 PF00005 ABC transporter FYA08_RS01205 PF00005 ABC transporter FYA08_RS01210 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS01215 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS01220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FYA08_RS01225 PF01648 4'-phosphopantetheinyl transferase superfamily FYA08_RS01230 PF01594 AI-2E family transporter FYA08_RS01235 PF07690 Major Facilitator Superfamily FYA08_RS01240 PF08786 DcrB FYA08_RS01245 PF02592 Putative vitamin uptake transporter FYA08_RS01250 PF01206 Sulfurtransferase TusA FYA08_RS01255 PF00403 Heavy-metal-associated domain FYA08_RS01260 PF07947 YhhN family FYA08_RS01265 PF10694 Protein of unknown function (DUF2500) FYA08_RS01270 PF06611 Protein of unknown function (DUF1145) FYA08_RS01280 PF00448 SRP54-type protein, GTPase domain FYA08_RS01280 PF02881 SRP54-type protein, helical bundle domain FYA08_RS01285 PF00005 ABC transporter FYA08_RS01290 PF18075 FtsX extracellular domain FYA08_RS01290 PF02687 FtsX-like permease family FYA08_RS01295 PF04545 Sigma-70, region 4 FYA08_RS01295 PF04542 Sigma-70 region 2 FYA08_RS01300 PF13458 Periplasmic binding protein FYA08_RS01305 PF12568 Acetyltransferase (GNAT) domain, PanZ FYA08_RS01310 PF13458 Periplasmic binding protein FYA08_RS01315 PF02653 Branched-chain amino acid transport system / permease component FYA08_RS01320 PF02653 Branched-chain amino acid transport system / permease component FYA08_RS01320 PF11862 Domain of unknown function (DUF3382) FYA08_RS01325 PF12399 Branched-chain amino acid ATP-binding cassette transporter FYA08_RS01325 PF00005 ABC transporter FYA08_RS01330 PF00005 ABC transporter FYA08_RS01335 PF13416 Bacterial extracellular solute-binding protein FYA08_RS01340 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS01345 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS01350 PF17912 MalK OB fold domain FYA08_RS01350 PF00005 ABC transporter FYA08_RS01355 PF03009 Glycerophosphoryl diester phosphodiesterase family FYA08_RS01360 PF10956 Protein of unknown function (DUF2756) FYA08_RS01370 PF15567 Immunity protein 35 FYA08_RS01395 PF05638 Type VI secretion system effector, Hcp FYA08_RS01400 PF00583 Acetyltransferase (GNAT) family FYA08_RS01405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FYA08_RS01405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FYA08_RS01410 PF17954 Quercetinase C-terminal cupin domain FYA08_RS01410 PF02678 Pirin FYA08_RS01415 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FYA08_RS01415 PF00356 Bacterial regulatory proteins, lacI family FYA08_RS01420 PF01202 Shikimate kinase FYA08_RS01425 PF02447 GntP family permease FYA08_RS01430 PF01914 MarC family integral membrane protein FYA08_RS01435 PF01118 Semialdehyde dehydrogenase, NAD binding domain FYA08_RS01435 PF02774 Semialdehyde dehydrogenase, dimerisation domain FYA08_RS01440 PF00128 Alpha amylase, catalytic domain FYA08_RS01440 PF02806 Alpha amylase, C-terminal all-beta domain FYA08_RS01440 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FYA08_RS01445 PF00128 Alpha amylase, catalytic domain FYA08_RS01445 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FYA08_RS01445 PF18390 Glycogen debranching enzyme C-terminal domain FYA08_RS01450 PF00483 Nucleotidyl transferase FYA08_RS01455 PF08323 Starch synthase catalytic domain FYA08_RS01455 PF00534 Glycosyl transferases group 1 FYA08_RS01460 PF00343 Carbohydrate phosphorylase FYA08_RS01470 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FYA08_RS01470 PF01266 FAD dependent oxidoreductase FYA08_RS01475 PF00581 Rhodanese-like domain FYA08_RS01480 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease FYA08_RS01480 PF01694 Rhomboid family FYA08_RS01485 PF00455 DeoR C terminal sensor domain FYA08_RS01485 PF08220 DeoR-like helix-turn-helix domain FYA08_RS01490 PF00158 Sigma-54 interaction domain FYA08_RS01490 PF06956 Regulator of RNA terminal phosphate cyclase FYA08_RS01495 PF01139 tRNA-splicing ligase RtcB FYA08_RS01500 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain FYA08_RS01500 PF01137 RNA 3'-terminal phosphate cyclase FYA08_RS01505 PF00196 Bacterial regulatory proteins, luxR family FYA08_RS01505 PF17874 MalT-like TPR region FYA08_RS01510 PF00343 Carbohydrate phosphorylase FYA08_RS01515 PF02446 4-alpha-glucanotransferase FYA08_RS01520 PF02447 GntP family permease FYA08_RS01525 PF01521 Iron-sulphur cluster biosynthesis FYA08_RS01525 PF01106 NifU-like domain FYA08_RS01530 PF00156 Phosphoribosyl transferase domain FYA08_RS01535 PF00561 alpha/beta hydrolase fold FYA08_RS01540 PF04754 Putative transposase, YhgA-like FYA08_RS01545 PF09012 FeoC like transcriptional regulator FYA08_RS01550 PF07664 Ferrous iron transport protein B C terminus FYA08_RS01550 PF17910 FeoB cytosolic helical domain FYA08_RS01550 PF02421 Ferrous iron transport protein B FYA08_RS01550 PF07670 Nucleoside recognition FYA08_RS01555 PF04023 FeoA domain FYA08_RS01560 PF09371 Tex-like protein N-terminal domain FYA08_RS01560 PF16921 Tex protein YqgF-like domain FYA08_RS01560 PF00575 S1 RNA binding domain FYA08_RS01560 PF17674 HHH domain FYA08_RS01565 PF03449 Transcription elongation factor, N-terminal FYA08_RS01565 PF01272 Transcription elongation factor, GreA/GreB, C-term FYA08_RS01570 PF00072 Response regulator receiver domain FYA08_RS01570 PF00486 Transcriptional regulatory protein, C terminal FYA08_RS01575 PF00512 His Kinase A (phospho-acceptor) domain FYA08_RS01575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS01575 PF00672 HAMP domain FYA08_RS01580 PF01293 Phosphoenolpyruvate carboxykinase FYA08_RS01585 PF13687 Domain of unknown function (DUF4153) FYA08_RS01590 PF01430 Hsp33 protein FYA08_RS01595 PF01479 S4 domain FYA08_RS01600 PF13419 Haloacid dehalogenase-like hydrolase FYA08_RS01605 PF07095 Intracellular growth attenuator protein IgaA FYA08_RS01610 PF00293 NUDIX domain FYA08_RS01615 PF17092 Penicillin-binding protein OB-like domain FYA08_RS01615 PF00912 Transglycosylase FYA08_RS01615 PF00905 Penicillin binding protein transpeptidase domain FYA08_RS01625 PF05137 Fimbrial assembly protein (PilN) FYA08_RS01635 PF10748 DNA utilization proteins HofP FYA08_RS01640 PF00263 Bacterial type II and III secretion system protein FYA08_RS01640 PF03958 Bacterial type II/III secretion system short domain FYA08_RS01645 PF01202 Shikimate kinase FYA08_RS01650 PF01761 3-dehydroquinate synthase FYA08_RS01655 PF05036 Sporulation related domain FYA08_RS01660 PF02086 D12 class N6 adenine-specific DNA methyltransferase FYA08_RS01665 PF00834 Ribulose-phosphate 3 epimerase family FYA08_RS01670 PF13419 Haloacid dehalogenase-like hydrolase FYA08_RS01675 PF00579 tRNA synthetases class I (W and Y) FYA08_RS01685 PF14502 Helix-turn-helix domain FYA08_RS01685 PF14503 YhfZ C-terminal domain FYA08_RS01695 PF01168 Alanine racemase, N-terminal domain FYA08_RS01700 PF01676 Metalloenzyme superfamily FYA08_RS01705 PF02126 Phosphotriesterase family FYA08_RS01710 PF10941 Protein of unknown function DUF2620 FYA08_RS01715 PF10797 Protein of unknown function FYA08_RS01720 PF00155 Aminotransferase class I and II FYA08_RS01725 PF07702 UTRA domain FYA08_RS01725 PF00392 Bacterial regulatory proteins, gntR family FYA08_RS01730 PF00294 pfkB family carbohydrate kinase FYA08_RS01735 PF01261 Xylose isomerase-like TIM barrel FYA08_RS01740 PF01380 SIS domain FYA08_RS01745 PF13520 Amino acid permease FYA08_RS01750 PF13978 Protein of unknown function (DUF4223) FYA08_RS01755 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FYA08_RS01755 PF14824 Sirohaem biosynthesis protein central FYA08_RS01755 PF10414 Sirohaem synthase dimerisation region FYA08_RS01760 PF01226 Formate/nitrite transporter FYA08_RS01765 PF13806 Rieske-like [2Fe-2S] domain FYA08_RS01770 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FYA08_RS01770 PF18267 Rubredoxin NAD+ reductase C-terminal domain FYA08_RS01770 PF04324 BFD-like [2Fe-2S] binding domain FYA08_RS01770 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FYA08_RS01770 PF07992 Pyridine nucleotide-disulphide oxidoreductase FYA08_RS01775 PF07690 Major Facilitator Superfamily FYA08_RS01780 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FYA08_RS01785 PF10832 Protein of unknown function (DUF2559) FYA08_RS01790 PF02661 Fic/DOC family FYA08_RS01795 PF00117 Glutamine amidotransferase class-I FYA08_RS01800 PF00202 Aminotransferase class-III FYA08_RS01805 PF12805 FUSC-like inner membrane protein yccS FYA08_RS01810 PF00027 Cyclic nucleotide-binding domain FYA08_RS01810 PF13545 Crp-like helix-turn-helix domain FYA08_RS01815 PF02566 OsmC-like protein FYA08_RS01820 PF00485 Phosphoribulokinase / Uridine kinase family FYA08_RS01825 PF06794 Uncharacterised protein family (UPF0270) FYA08_RS01830 PF00561 alpha/beta hydrolase fold FYA08_RS01835 PF00005 ABC transporter FYA08_RS01835 PF12848 ABC transporter FYA08_RS01840 PF02525 Flavodoxin-like fold FYA08_RS01845 PF00999 Sodium/hydrogen exchanger family FYA08_RS01845 PF02254 TrkA-N domain FYA08_RS01850 PF09526 Probable metal-binding protein (DUF2387) FYA08_RS01855 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FYA08_RS01860 PF04102 SlyX FYA08_RS01865 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FYA08_RS01865 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FYA08_RS01870 PF08348 YheO-like PAS domain FYA08_RS01870 PF13309 HTH domain FYA08_RS01875 PF02635 DsrE/DsrF-like family FYA08_RS01880 PF02635 DsrE/DsrF-like family FYA08_RS01885 PF04077 DsrH like protein FYA08_RS01890 PF00164 Ribosomal protein S12/S23 FYA08_RS01895 PF00177 Ribosomal protein S7p/S5e FYA08_RS01900 PF14492 Elongation Factor G, domain II FYA08_RS01900 PF00679 Elongation factor G C-terminus FYA08_RS01900 PF03764 Elongation factor G, domain IV FYA08_RS01900 PF00009 Elongation factor Tu GTP binding domain FYA08_RS01900 PF03144 Elongation factor Tu domain 2 FYA08_RS01905 PF00009 Elongation factor Tu GTP binding domain FYA08_RS01905 PF03143 Elongation factor Tu C-terminal domain FYA08_RS01905 PF03144 Elongation factor Tu domain 2 FYA08_RS01915 PF01636 Phosphotransferase enzyme family FYA08_RS01925 PF02839 Carbohydrate binding domain FYA08_RS01930 PF04324 BFD-like [2Fe-2S] binding domain FYA08_RS01935 PF00210 Ferritin-like domain FYA08_RS01940 PF01478 Type IV leader peptidase family FYA08_RS01945 PF04612 Type II secretion system (T2SS), protein M FYA08_RS01950 PF05134 Type II secretion system (T2SS), protein L FYA08_RS01950 PF12693 GspL periplasmic domain FYA08_RS01955 PF03934 Type II secretion system (T2SS), protein K FYA08_RS01960 PF11612 Type II secretion system (T2SS), protein J FYA08_RS01960 PF07963 Prokaryotic N-terminal methylation motif FYA08_RS01965 PF07963 Prokaryotic N-terminal methylation motif FYA08_RS01965 PF02501 Type II secretion system (T2SS), protein I FYA08_RS01970 PF07963 Prokaryotic N-terminal methylation motif FYA08_RS01970 PF12019 Type II transport protein GspH FYA08_RS01975 PF07963 Prokaryotic N-terminal methylation motif FYA08_RS01975 PF08334 Type II secretion system (T2SS), protein G FYA08_RS01980 PF00482 Type II secretion system (T2SS), protein F FYA08_RS01985 PF00437 Type II/IV secretion system protein FYA08_RS01990 PF03958 Bacterial type II/III secretion system short domain FYA08_RS01990 PF00263 Bacterial type II and III secretion system protein FYA08_RS01995 PF11356 Type II secretion system protein C FYA08_RS02000 PF01471 Putative peptidoglycan binding domain FYA08_RS02000 PF13401 AAA domain FYA08_RS02010 PF00338 Ribosomal protein S10p/S20e FYA08_RS02015 PF00297 Ribosomal protein L3 FYA08_RS02020 PF00573 Ribosomal protein L4/L1 family FYA08_RS02025 PF00276 Ribosomal protein L23 FYA08_RS02030 PF03947 Ribosomal Proteins L2, C-terminal domain FYA08_RS02030 PF00181 Ribosomal Proteins L2, RNA binding domain FYA08_RS02035 PF00203 Ribosomal protein S19 FYA08_RS02040 PF00237 Ribosomal protein L22p/L17e FYA08_RS02045 PF00189 Ribosomal protein S3, C-terminal domain FYA08_RS02045 PF07650 KH domain FYA08_RS02050 PF00252 Ribosomal protein L16p/L10e FYA08_RS02055 PF00831 Ribosomal L29 protein FYA08_RS02060 PF00366 Ribosomal protein S17 FYA08_RS02065 PF00238 Ribosomal protein L14p/L23e FYA08_RS02070 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FYA08_RS02070 PF00467 KOW motif FYA08_RS02075 PF00673 ribosomal L5P family C-terminus FYA08_RS02075 PF00281 Ribosomal protein L5 FYA08_RS02080 PF00253 Ribosomal protein S14p/S29e FYA08_RS02085 PF00410 Ribosomal protein S8 FYA08_RS02090 PF00347 Ribosomal protein L6 FYA08_RS02095 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FYA08_RS02100 PF03719 Ribosomal protein S5, C-terminal domain FYA08_RS02100 PF00333 Ribosomal protein S5, N-terminal domain FYA08_RS02105 PF00327 Ribosomal protein L30p/L7e FYA08_RS02110 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FYA08_RS02115 PF00344 SecY translocase FYA08_RS02120 PF00444 Ribosomal protein L36 FYA08_RS02125 PF00416 Ribosomal protein S13/S18 FYA08_RS02130 PF00411 Ribosomal protein S11 FYA08_RS02135 PF01479 S4 domain FYA08_RS02135 PF00163 Ribosomal protein S4/S9 N-terminal domain FYA08_RS02140 PF01000 RNA polymerase Rpb3/RpoA insert domain FYA08_RS02140 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FYA08_RS02140 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FYA08_RS02145 PF01196 Ribosomal protein L17 FYA08_RS02150 PF09350 Domain of unknown function (DUF1992) FYA08_RS02155 PF13411 MerR HTH family regulatory protein FYA08_RS02160 PF03889 Alternative ribosome-rescue factor A FYA08_RS02165 PF01741 Large-conductance mechanosensitive channel, MscL FYA08_RS02170 PF02080 TrkA-C domain FYA08_RS02170 PF02254 TrkA-N domain FYA08_RS02175 PF01189 16S rRNA methyltransferase RsmB/F FYA08_RS02175 PF01029 NusB family FYA08_RS02180 PF02911 Formyl transferase, C-terminal domain FYA08_RS02180 PF00551 Formyl transferase FYA08_RS02185 PF01327 Polypeptide deformylase FYA08_RS02190 PF02481 DNA recombination-mediator protein A FYA08_RS02190 PF17782 DprA winged helix domain FYA08_RS02195 PF04361 Protein of unknown function (DUF494) FYA08_RS02200 PF01396 Topoisomerase DNA binding C4 zinc finger FYA08_RS02205 PF01300 Telomere recombination FYA08_RS02210 PF01488 Shikimate / quinate 5-dehydrogenase FYA08_RS02210 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FYA08_RS02210 PF08501 Shikimate dehydrogenase substrate binding domain FYA08_RS02220 PF07369 Protein of unknown function (DUF1488) FYA08_RS02225 PF00132 Bacterial transferase hexapeptide (six repeats) FYA08_RS02270 PF00005 ABC transporter FYA08_RS02275 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS02280 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS02295 PF00873 AcrB/AcrD/AcrF family FYA08_RS02300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FYA08_RS02300 PF00529 HlyD membrane-fusion protein of T1SS FYA08_RS02305 PF08361 MAATS-type transcriptional repressor, C-terminal region FYA08_RS02305 PF00440 Bacterial regulatory proteins, tetR family FYA08_RS02310 PF10831 Protein of unknown function (DUF2556) FYA08_RS02315 PF01555 DNA methylase FYA08_RS02320 PF02954 Bacterial regulatory protein, Fis family FYA08_RS02325 PF01207 Dihydrouridine synthase (Dus) FYA08_RS02335 PF00474 Sodium:solute symporter family FYA08_RS02340 PF06196 Protein of unknown function (DUF997) FYA08_RS02345 PF00289 Biotin carboxylase, N-terminal domain FYA08_RS02345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FYA08_RS02345 PF02785 Biotin carboxylase C-terminal domain FYA08_RS02350 PF00364 Biotin-requiring enzyme FYA08_RS02355 PF08240 Alcohol dehydrogenase GroES-like domain FYA08_RS02355 PF00107 Zinc-binding dehydrogenase FYA08_RS02360 PF00563 EAL domain FYA08_RS02360 PF00990 Diguanylate cyclase, GGDEF domain FYA08_RS02360 PF17157 Gammaproteobacterial periplasmic sensor domain FYA08_RS02370 PF04085 rod shape-determining protein MreC FYA08_RS02375 PF04093 rod shape-determining protein MreD FYA08_RS02380 PF02545 Maf-like protein FYA08_RS02385 PF00575 S1 RNA binding domain FYA08_RS02385 PF10150 Ribonuclease E/G family FYA08_RS02390 PF13116 Protein of unknown function FYA08_RS02390 PF13502 AsmA-like C-terminal region FYA08_RS02395 PF01523 Putative modulator of DNA gyrase FYA08_RS02400 PF03466 LysR substrate binding domain FYA08_RS02400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS02405 PF07869 Protein of unknown function (DUF1656) FYA08_RS02410 PF13533 Biotin-lipoyl like FYA08_RS02415 PF04632 Fusaric acid resistance protein family FYA08_RS02420 PF01337 Barstar (barnase inhibitor) FYA08_RS02425 PF07338 Protein of unknown function (DUF1471) FYA08_RS02430 PF01316 Arginine repressor, DNA binding domain FYA08_RS02430 PF02863 Arginine repressor, C-terminal domain FYA08_RS02435 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FYA08_RS02435 PF00056 lactate/malate dehydrogenase, NAD binding domain FYA08_RS02440 PF13180 PDZ domain FYA08_RS02445 PF00595 PDZ domain FYA08_RS02445 PF13180 PDZ domain FYA08_RS02450 PF06295 Protein of unknown function (DUF1043) FYA08_RS02455 PF03969 AFG1-like ATPase FYA08_RS02460 PF00572 Ribosomal protein L13 FYA08_RS02465 PF00380 Ribosomal protein S9/S16 FYA08_RS02470 PF02798 Glutathione S-transferase, N-terminal domain FYA08_RS02470 PF00043 Glutathione S-transferase, C-terminal domain FYA08_RS02475 PF04386 Stringent starvation protein B FYA08_RS02480 PF03606 C4-dicarboxylate anaerobic carrier FYA08_RS02485 PF07729 FCD domain FYA08_RS02485 PF00392 Bacterial regulatory proteins, gntR family FYA08_RS02490 PF00701 Dihydrodipicolinate synthetase family FYA08_RS02495 PF07690 Major Facilitator Superfamily FYA08_RS02500 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase FYA08_RS02505 PF00480 ROK family FYA08_RS02510 PF04074 YhcH/YjgK/YiaL FYA08_RS02515 PF06250 YhcG PDDEXK nuclease domain FYA08_RS02515 PF17761 DUF1016 N-terminal domain FYA08_RS02520 PF06551 Protein of unknown function (DUF1120) FYA08_RS02530 PF01609 Transposase DDE domain FYA08_RS02530 PF05598 Transposase domain (DUF772) FYA08_RS02540 PF13954 PapC N-terminal domain FYA08_RS02540 PF13953 PapC C-terminal domain FYA08_RS02540 PF00577 Outer membrane usher protein FYA08_RS02545 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FYA08_RS02550 PF06551 Protein of unknown function (DUF1120) FYA08_RS02555 PF07992 Pyridine nucleotide-disulphide oxidoreductase FYA08_RS02555 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FYA08_RS02560 PF00310 Glutamine amidotransferases class-II FYA08_RS02560 PF04898 Glutamate synthase central domain FYA08_RS02560 PF01645 Conserved region in glutamate synthase FYA08_RS02560 PF01493 GXGXG motif FYA08_RS02565 PF04055 Radical SAM superfamily FYA08_RS02565 PF16199 Radical_SAM C-terminal domain FYA08_RS02570 PF00072 Response regulator receiver domain FYA08_RS02570 PF00512 His Kinase A (phospho-acceptor) domain FYA08_RS02570 PF00989 PAS fold FYA08_RS02570 PF01627 Hpt domain FYA08_RS02570 PF18415 Histidine kinase receptor ArcB trans-membrane domain FYA08_RS02570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS02585 PF00912 Transglycosylase FYA08_RS02590 PF10707 PhoP regulatory network protein YrbL FYA08_RS02595 PF00381 PTS HPr component phosphorylation site FYA08_RS02600 PF03668 P-loop ATPase protein family FYA08_RS02605 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FYA08_RS02610 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FYA08_RS02615 PF04552 Sigma-54, DNA binding domain FYA08_RS02615 PF00309 Sigma-54 factor, Activator interacting domain (AID) FYA08_RS02615 PF04963 Sigma-54 factor, core binding domain FYA08_RS02620 PF00005 ABC transporter FYA08_RS02620 PF12399 Branched-chain amino acid ATP-binding cassette transporter FYA08_RS02625 PF03968 OstA-like protein FYA08_RS02630 PF06835 Lipopolysaccharide-assembly, LptC-related FYA08_RS02640 PF00571 CBS domain FYA08_RS02640 PF01380 SIS domain FYA08_RS02645 PF01699 Sodium/calcium exchanger protein FYA08_RS02650 PF00005 ABC transporter FYA08_RS02655 PF02405 Permease MlaE FYA08_RS02660 PF02470 MlaD protein FYA08_RS02665 PF05494 MlaC protein FYA08_RS02670 PF13466 STAS domain FYA08_RS02675 PF01722 BolA-like protein FYA08_RS02680 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FYA08_RS02685 PF13693 Winged helix-turn-helix DNA-binding FYA08_RS02690 PF00348 Polyprenyl synthetase FYA08_RS02695 PF00829 Ribosomal prokaryotic L21 protein FYA08_RS02700 PF01016 Ribosomal L27 protein FYA08_RS02705 PF00892 EamA-like transporter family FYA08_RS02710 PF01926 50S ribosome-binding GTPase FYA08_RS02710 PF01018 GTP1/OBG FYA08_RS02715 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family FYA08_RS02720 PF01272 Transcription elongation factor, GreA/GreB, C-term FYA08_RS02720 PF03449 Transcription elongation factor, N-terminal FYA08_RS02725 PF01985 CRS1 / YhbY (CRM) domain FYA08_RS02730 PF01728 FtsJ-like methyltransferase FYA08_RS02735 PF00004 ATPase family associated with various cellular activities (AAA) FYA08_RS02735 PF01434 Peptidase family M41 FYA08_RS02735 PF17862 AAA+ lid domain FYA08_RS02735 PF06480 FtsH Extracellular FYA08_RS02740 PF00809 Pterin binding enzyme FYA08_RS02745 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FYA08_RS02745 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FYA08_RS02745 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FYA08_RS02745 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FYA08_RS02750 PF03840 Preprotein translocase SecG subunit FYA08_RS02760 PF00884 Sulfatase FYA08_RS02765 PF00764 Arginosuccinate synthase FYA08_RS02775 PF02576 RimP N-terminal domain FYA08_RS02775 PF17384 RimP C-terminal SH3 domain FYA08_RS02780 PF13184 NusA-like KH domain FYA08_RS02780 PF00575 S1 RNA binding domain FYA08_RS02780 PF08529 NusA N-terminal domain FYA08_RS02785 PF04760 Translation initiation factor IF-2, N-terminal region FYA08_RS02785 PF00009 Elongation factor Tu GTP binding domain FYA08_RS02785 PF11987 Translation-initiation factor 2 FYA08_RS02785 PF08364 Bacterial translation initiation factor IF-2 associated region FYA08_RS02790 PF02033 Ribosome-binding factor A FYA08_RS02795 PF16198 tRNA pseudouridylate synthase B C-terminal domain FYA08_RS02795 PF09157 Pseudouridine synthase II TruB, C-terminal FYA08_RS02795 PF01509 TruB family pseudouridylate synthase (N terminal domain) FYA08_RS02800 PF00312 Ribosomal protein S15 FYA08_RS02805 PF00013 KH domain FYA08_RS02805 PF01138 3' exoribonuclease family, domain 1 FYA08_RS02805 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FYA08_RS02805 PF03725 3' exoribonuclease family, domain 2 FYA08_RS02805 PF00575 S1 RNA binding domain FYA08_RS02810 PF13181 Tetratricopeptide repeat FYA08_RS02810 PF07719 Tetratricopeptide repeat FYA08_RS02820 PF00271 Helicase conserved C-terminal domain FYA08_RS02820 PF12343 Cold shock protein DEAD box A FYA08_RS02820 PF03880 DbpA RNA binding domain FYA08_RS02820 PF00270 DEAD/DEAH box helicase FYA08_RS02825 PF03222 Tryptophan/tyrosine permease family FYA08_RS02830 PF00296 Luciferase-like monooxygenase FYA08_RS02835 PF01136 Peptidase family U32 FYA08_RS02840 PF01136 Peptidase family U32 FYA08_RS02845 PF02036 SCP-2 sterol transfer family FYA08_RS02850 PF13508 Acetyltransferase (GNAT) domain FYA08_RS02855 PF01541 GIY-YIG catalytic domain FYA08_RS02865 PF01965 DJ-1/PfpI family FYA08_RS02870 PF13460 NAD(P)H-binding FYA08_RS02875 PF03773 Predicted permease FYA08_RS02880 PF04972 BON domain FYA08_RS02885 PF13580 SIS domain FYA08_RS02890 PF02021 Uncharacterised protein family UPF0102 FYA08_RS02895 PF04348 LppC putative lipoprotein FYA08_RS02900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FYA08_RS02905 PF00419 Fimbrial protein FYA08_RS02910 PF13953 PapC C-terminal domain FYA08_RS02910 PF00577 Outer membrane usher protein FYA08_RS02910 PF13954 PapC N-terminal domain FYA08_RS02915 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FYA08_RS02915 PF02753 Pili assembly chaperone PapD, C-terminal domain FYA08_RS02920 PF00419 Fimbrial protein FYA08_RS02925 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FYA08_RS02930 PF03613 PTS system mannose/fructose/sorbose family IID component FYA08_RS02935 PF03609 PTS system sorbose-specific iic component FYA08_RS02940 PF03830 PTS system sorbose subfamily IIB component FYA08_RS02945 PF01116 Fructose-bisphosphate aldolase class-II FYA08_RS02950 PF01380 SIS domain FYA08_RS02965 PF03830 PTS system sorbose subfamily IIB component FYA08_RS02970 PF08013 Tagatose 6 phosphate kinase FYA08_RS02975 PF08220 DeoR-like helix-turn-helix domain FYA08_RS02975 PF00455 DeoR C terminal sensor domain FYA08_RS02980 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system FYA08_RS02985 PF15937 prlF antitoxin for toxin YhaV_toxin FYA08_RS02990 PF08666 SAF domain FYA08_RS02990 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FYA08_RS02995 PF07690 Major Facilitator Superfamily FYA08_RS03000 PF03328 HpcH/HpaI aldolase/citrate lyase family FYA08_RS03005 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FYA08_RS03005 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FYA08_RS03010 PF02595 Glycerate kinase family FYA08_RS03035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS03035 PF03466 LysR substrate binding domain FYA08_RS03040 PF00291 Pyridoxal-phosphate dependent enzyme FYA08_RS03045 PF03222 Tryptophan/tyrosine permease family FYA08_RS03050 PF00871 Acetokinase family FYA08_RS03055 PF02901 Pyruvate formate lyase-like FYA08_RS03055 PF01228 Glycine radical FYA08_RS03060 PF01042 Endoribonuclease L-PSP FYA08_RS03065 PF03313 Serine dehydratase alpha chain FYA08_RS03065 PF03315 Serine dehydratase beta chain FYA08_RS03075 PF03313 Serine dehydratase alpha chain FYA08_RS03085 PF17954 Quercetinase C-terminal cupin domain FYA08_RS03085 PF02678 Pirin FYA08_RS03090 PF03466 LysR substrate binding domain FYA08_RS03090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS03095 PF05656 Protein of unknown function (DUF805) FYA08_RS03100 PF05656 Protein of unknown function (DUF805) FYA08_RS03105 PF13409 Glutathione S-transferase, N-terminal domain FYA08_RS03110 PF07681 DoxX FYA08_RS03115 PF13997 YqjK-like protein FYA08_RS03120 PF07332 Putative Actinobacterial Holin-X, holin superfamily III FYA08_RS03125 PF05957 Bacterial protein of unknown function (DUF883) FYA08_RS03130 PF06476 Protein of unknown function (DUF1090) FYA08_RS03135 PF13721 SecD export protein N-terminal TM region FYA08_RS03140 PF09335 SNARE associated Golgi protein FYA08_RS03145 PF00392 Bacterial regulatory proteins, gntR family FYA08_RS03145 PF07729 FCD domain FYA08_RS03150 PF07690 Major Facilitator Superfamily FYA08_RS03155 PF02614 Glucuronate isomerase FYA08_RS03160 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FYA08_RS03160 PF08666 SAF domain FYA08_RS03165 PF10688 Bacterial inner membrane protein FYA08_RS03170 PF00375 Sodium:dicarboxylate symporter family FYA08_RS03175 PF03741 Integral membrane protein TerC family FYA08_RS03180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FYA08_RS03185 PF02698 DUF218 domain FYA08_RS03190 PF01863 Protein of unknown function DUF45 FYA08_RS03195 PF05175 Methyltransferase small domain FYA08_RS03200 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system FYA08_RS03205 PF01381 Helix-turn-helix FYA08_RS03210 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FYA08_RS03210 PF07992 Pyridine nucleotide-disulphide oxidoreductase FYA08_RS03215 PF01204 Trehalase FYA08_RS03225 PF13520 Amino acid permease FYA08_RS03230 PF04074 YhcH/YjgK/YiaL FYA08_RS03235 PF02929 Beta galactosidase small chain FYA08_RS03235 PF02837 Glycosyl hydrolases family 2, sugar binding domain FYA08_RS03235 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FYA08_RS03235 PF00703 Glycosyl hydrolases family 2 FYA08_RS03235 PF16353 Domain of unknown function(DUF4981) FYA08_RS03240 PF00356 Bacterial regulatory proteins, lacI family FYA08_RS03245 PF01588 Putative tRNA binding domain FYA08_RS03250 PF00202 Aminotransferase class-III FYA08_RS03255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FYA08_RS03255 PF08447 PAS fold FYA08_RS03260 PF03551 Transcriptional regulator PadR-like family FYA08_RS03265 PF04954 Siderophore-interacting protein FYA08_RS03265 PF08021 Siderophore-interacting FAD-binding domain FYA08_RS03275 PF03167 Uracil DNA glycosylase superfamily FYA08_RS03280 PF04539 Sigma-70 region 3 FYA08_RS03280 PF04545 Sigma-70, region 4 FYA08_RS03280 PF04542 Sigma-70 region 2 FYA08_RS03280 PF00140 Sigma-70 factor, region 1.2 FYA08_RS03280 PF03979 Sigma-70 factor, region 1.1 FYA08_RS03280 PF04546 Sigma-70, non-essential region FYA08_RS03285 PF08278 DNA primase DnaG DnaB-binding FYA08_RS03285 PF08275 DNA primase catalytic core, N-terminal domain FYA08_RS03285 PF01807 CHC2 zinc finger FYA08_RS03285 PF10410 DnaB-helicase binding domain of primase FYA08_RS03290 PF01165 Ribosomal protein S21 FYA08_RS03295 PF00814 Glycoprotease family FYA08_RS03300 PF00939 Sodium:sulfate symporter transmembrane region FYA08_RS03310 PF05681 Fumarate hydratase (Fumerase) FYA08_RS03315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS03315 PF03466 LysR substrate binding domain FYA08_RS03320 PF02660 Glycerol-3-phosphate acyltransferase FYA08_RS03325 PF02152 Dihydroneopterin aldolase FYA08_RS03330 PF02673 Bacitracin resistance protein BacA FYA08_RS03335 PF01966 HD domain FYA08_RS03335 PF12627 Probable RNA and SrmB- binding site of polymerase A FYA08_RS03335 PF01743 Poly A polymerase head domain FYA08_RS03340 PF08239 Bacterial SH3 domain FYA08_RS03345 PF01928 CYTH domain FYA08_RS03350 PF03710 Glutamate-ammonia ligase adenylyltransferase FYA08_RS03350 PF08335 GlnD PII-uridylyltransferase FYA08_RS03355 PF00294 pfkB family carbohydrate kinase FYA08_RS03355 PF01467 Cytidylyltransferase-like FYA08_RS03370 PF01145 SPFH domain / Band 7 family FYA08_RS03370 PF15975 Flotillin FYA08_RS03375 PF07290 Protein of unknown function (DUF1449) FYA08_RS03380 PF08971 Glycogen synthesis protein FYA08_RS03390 PF02753 Pili assembly chaperone PapD, C-terminal domain FYA08_RS03390 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FYA08_RS03395 PF13953 PapC C-terminal domain FYA08_RS03395 PF13954 PapC N-terminal domain FYA08_RS03395 PF00577 Outer membrane usher protein FYA08_RS03405 PF00419 Fimbrial protein FYA08_RS03410 PF04380 Membrane fusogenic activity FYA08_RS03415 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FYA08_RS03420 PF02535 ZIP Zinc transporter FYA08_RS03425 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FYA08_RS03430 PF03738 Glutathionylspermidine synthase preATP-grasp FYA08_RS03435 PF06693 Protein of unknown function (DUF1190) FYA08_RS03440 PF02321 Outer membrane efflux protein FYA08_RS03445 PF00293 NUDIX domain FYA08_RS03450 PF06853 Protein of unknown function (DUF1249) FYA08_RS03455 PF00149 Calcineurin-like phosphoesterase FYA08_RS03460 PF05728 Uncharacterised protein family (UPF0227) FYA08_RS03465 PF00204 DNA gyrase B FYA08_RS03465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS03465 PF01751 Toprim domain FYA08_RS03465 PF00986 DNA gyrase B subunit, carboxyl terminus FYA08_RS03470 PF03992 Antibiotic biosynthesis monooxygenase FYA08_RS03475 PF02525 Flavodoxin-like fold FYA08_RS03480 PF10840 Protein of unknown function (DUF2645) FYA08_RS03485 PF08521 Two-component sensor kinase N-terminal FYA08_RS03485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS03485 PF00512 His Kinase A (phospho-acceptor) domain FYA08_RS03490 PF00072 Response regulator receiver domain FYA08_RS03490 PF00486 Transcriptional regulatory protein, C terminal FYA08_RS03495 PF04076 Bacterial OB fold (BOF) protein FYA08_RS03500 PF06445 GyrI-like small molecule binding domain FYA08_RS03505 PF15723 Motility quorum-sensing regulator, toxin of MqsA FYA08_RS03510 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA FYA08_RS03515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FYA08_RS03520 PF03989 DNA gyrase C-terminal domain, beta-propeller FYA08_RS03520 PF00521 DNA gyrase/topoisomerase IV, subunit A FYA08_RS03525 PF01553 Acyltransferase FYA08_RS03530 PF00394 Multicopper oxidase FYA08_RS03530 PF07732 Multicopper oxidase FYA08_RS03530 PF07731 Multicopper oxidase FYA08_RS03535 PF04055 Radical SAM superfamily FYA08_RS03535 PF11842 Domain of unknown function (DUF3362) FYA08_RS03535 PF08497 Radical SAM N-terminal FYA08_RS03540 PF04728 Lipoprotein leucine-zipper FYA08_RS03545 PF12883 Protein of unknown function (DUF3828) FYA08_RS03550 PF00248 Aldo/keto reductase family FYA08_RS03555 PF00465 Iron-containing alcohol dehydrogenase FYA08_RS03560 PF12833 Helix-turn-helix domain FYA08_RS03560 PF06719 AraC-type transcriptional regulator N-terminus FYA08_RS03565 PF09335 SNARE associated Golgi protein FYA08_RS03570 PF01053 Cys/Met metabolism PLP-dependent enzyme FYA08_RS03575 PF01618 MotA/TolQ/ExbB proton channel family FYA08_RS03580 PF02472 Biopolymer transport protein ExbD/TolR FYA08_RS03590 PF03350 Uncharacterized protein family, UPF0114 FYA08_RS03595 PF00248 Aldo/keto reductase family FYA08_RS03605 PF11115 Protein of unknown function (DUF2623) FYA08_RS03610 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal FYA08_RS03610 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FYA08_RS03615 PF13247 4Fe-4S dicluster domain FYA08_RS03620 PF03916 Polysulphide reductase, NrfD FYA08_RS03625 PF00374 Nickel-dependent hydrogenase FYA08_RS03630 PF01750 Hydrogenase maturation protease FYA08_RS03635 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE FYA08_RS03640 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FYA08_RS03645 PF01455 HupF/HypC family FYA08_RS03650 PF02798 Glutathione S-transferase, N-terminal domain FYA08_RS03655 PF05257 CHAP domain FYA08_RS03655 PF03738 Glutathionylspermidine synthase preATP-grasp FYA08_RS03660 PF01384 Phosphate transporter family FYA08_RS03680 PF01943 Polysaccharide biosynthesis protein FYA08_RS03685 PF05598 Transposase domain (DUF772) FYA08_RS03685 PF01609 Transposase DDE domain FYA08_RS03695 PF00392 Bacterial regulatory proteins, gntR family FYA08_RS03695 PF07729 FCD domain FYA08_RS03700 PF02913 FAD linked oxidases, C-terminal domain FYA08_RS03700 PF01565 FAD binding domain FYA08_RS03705 PF01565 FAD binding domain FYA08_RS03710 PF13183 4Fe-4S dicluster domain FYA08_RS03710 PF02754 Cysteine-rich domain FYA08_RS03715 PF03928 Haem-degrading FYA08_RS03720 PF01274 Malate synthase FYA08_RS03725 PF02652 L-lactate permease FYA08_RS03730 PF13322 Domain of unknown function (DUF4092) FYA08_RS03730 PF17291 N-terminal domain of M60-like peptidases FYA08_RS03730 PF13402 Peptidase M60, enhancin and enhancin-like FYA08_RS03735 PF01478 Type IV leader peptidase family FYA08_RS03735 PF06750 Bacterial Peptidase A24 N-terminal domain FYA08_RS03740 PF16549 Type II secretion system (T2SS) pilotin, S protein FYA08_RS03745 PF11356 Type II secretion system protein C FYA08_RS03755 PF04612 Type II secretion system (T2SS), protein M FYA08_RS03765 PF04474 Protein of unknown function (DUF554) FYA08_RS03770 PF01276 Orn/Lys/Arg decarboxylase, major domain FYA08_RS03770 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FYA08_RS03770 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FYA08_RS03775 PF03825 Nucleoside H+ symporter FYA08_RS03780 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain FYA08_RS03780 PF01464 Transglycosylase SLT domain FYA08_RS03785 PF04362 Bacterial Fe(2+) trafficking FYA08_RS03790 PF00730 HhH-GPD superfamily base excision DNA repair protein FYA08_RS03790 PF00633 Helix-hairpin-helix motif FYA08_RS03790 PF10576 Iron-sulfur binding domain of endonuclease III FYA08_RS03790 PF14815 NUDIX domain FYA08_RS03795 PF02390 Putative methyltransferase FYA08_RS03800 PF04320 Protein with unknown function (DUF469) FYA08_RS03805 PF11101 Protein of unknown function (DUF2884) FYA08_RS03810 PF00710 Asparaginase, N-terminal FYA08_RS03810 PF17763 Glutaminase/Asparaginase C-terminal domain FYA08_RS03815 PF06717 Protein of unknown function (DUF1202) FYA08_RS03820 PF04055 Radical SAM superfamily FYA08_RS03820 PF06969 HemN C-terminal domain FYA08_RS03825 PF01725 Ham1 family FYA08_RS03830 PF02594 Uncharacterised ACR, YggU family COG1872 FYA08_RS03835 PF02325 YGGT family FYA08_RS03840 PF01168 Alanine racemase, N-terminal domain FYA08_RS03845 PF00437 Type II/IV secretion system protein FYA08_RS03850 PF03652 Holliday junction resolvase FYA08_RS03855 PF02622 Uncharacterized ACR, COG1678 FYA08_RS03860 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FYA08_RS03860 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FYA08_RS03865 PF04452 RNA methyltransferase FYA08_RS03870 PF04231 Endonuclease I FYA08_RS03875 PF17283 SprT-like zinc ribbon domain FYA08_RS03875 PF10263 SprT-like family FYA08_RS03880 PF00083 Sugar (and other) transporter FYA08_RS03885 PF02773 S-adenosylmethionine synthetase, C-terminal domain FYA08_RS03885 PF00438 S-adenosylmethionine synthetase, N-terminal domain FYA08_RS03885 PF02772 S-adenosylmethionine synthetase, central domain FYA08_RS03890 PF11036 Virulence promoting factor FYA08_RS03895 PF17810 Arginine decarboxylase helical bundle domain FYA08_RS03895 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FYA08_RS03895 PF17944 Arginine decarboxylase C-terminal helical extension FYA08_RS03900 PF00491 Arginase family FYA08_RS03905 PF01435 Peptidase family M48 FYA08_RS03910 PF00456 Transketolase, thiamine diphosphate binding domain FYA08_RS03910 PF02779 Transketolase, pyrimidine binding domain FYA08_RS03910 PF02780 Transketolase, C-terminal domain FYA08_RS03915 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FYA08_RS03920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FYA08_RS03920 PF02378 Phosphotransferase system, EIIC FYA08_RS03925 PF08240 Alcohol dehydrogenase GroES-like domain FYA08_RS03925 PF00107 Zinc-binding dehydrogenase FYA08_RS03930 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded FYA08_RS03935 PF05068 Mannitol repressor FYA08_RS03945 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FYA08_RS03945 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FYA08_RS03950 PF00162 Phosphoglycerate kinase FYA08_RS03955 PF01116 Fructose-bisphosphate aldolase class-II FYA08_RS03960 PF00924 Mechanosensitive ion channel FYA08_RS03960 PF05552 Conserved TM helix FYA08_RS03965 PF01810 LysE type translocator FYA08_RS03970 PF04402 Protein of unknown function (DUF541) FYA08_RS03975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS03975 PF03466 LysR substrate binding domain FYA08_RS03980 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FYA08_RS03980 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FYA08_RS03985 PF00378 Enoyl-CoA hydratase/isomerase FYA08_RS03995 PF01642 Methylmalonyl-CoA mutase FYA08_RS03995 PF02310 B12 binding domain FYA08_RS04000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS04000 PF03466 LysR substrate binding domain FYA08_RS04005 PF03466 LysR substrate binding domain FYA08_RS04010 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FYA08_RS04015 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FYA08_RS04015 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FYA08_RS04015 PF01842 ACT domain FYA08_RS04025 PF01812 5-formyltetrahydrofolate cyclo-ligase family FYA08_RS04035 PF05164 Cell division protein ZapA FYA08_RS04040 PF03695 Uncharacterised protein family (UPF0149) FYA08_RS04045 PF05195 Aminopeptidase P, N-terminal domain FYA08_RS04045 PF00557 Metallopeptidase family M24 FYA08_RS04050 PF01494 FAD binding domain FYA08_RS04055 PF01494 FAD binding domain FYA08_RS04065 PF08669 Glycine cleavage T-protein C-terminal barrel domain FYA08_RS04065 PF01571 Aminomethyltransferase folate-binding domain FYA08_RS04070 PF01597 Glycine cleavage H-protein FYA08_RS04075 PF02347 Glycine cleavage system P-protein FYA08_RS04085 PF00232 Glycosyl hydrolase family 1 FYA08_RS04090 PF04266 ASCH domain FYA08_RS04095 PF03006 Haemolysin-III related FYA08_RS04100 PF01571 Aminomethyltransferase folate-binding domain FYA08_RS04105 PF03937 Flavinator of succinate dehydrogenase FYA08_RS04110 PF07254 Membrane-bound toxin component of toxin-antitoxin system FYA08_RS04115 PF00258 Flavodoxin FYA08_RS04120 PF00589 Phage integrase family FYA08_RS04120 PF02899 Phage integrase, N-terminal SAM-like domain FYA08_RS04125 PF10411 Disulfide bond isomerase protein N-terminus FYA08_RS04125 PF13098 Thioredoxin-like domain FYA08_RS04130 PF17768 RecJ OB domain FYA08_RS04130 PF02272 DHHA1 domain FYA08_RS04130 PF01368 DHH family FYA08_RS04140 PF01336 OB-fold nucleic acid binding domain FYA08_RS04140 PF00152 tRNA synthetases class II (D, K and N) FYA08_RS04145 PF00293 NUDIX domain FYA08_RS04160 PF00860 Permease family FYA08_RS04165 PF07992 Pyridine nucleotide-disulphide oxidoreductase FYA08_RS04165 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FYA08_RS04165 PF13247 4Fe-4S dicluster domain FYA08_RS04170 PF13247 4Fe-4S dicluster domain FYA08_RS04175 PF00860 Permease family FYA08_RS04180 PF01979 Amidohydrolase family FYA08_RS04185 PF00860 Permease family FYA08_RS04190 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FYA08_RS04190 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FYA08_RS04190 PF01799 [2Fe-2S] binding domain FYA08_RS04195 PF00941 FAD binding domain in molybdopterin dehydrogenase FYA08_RS04200 PF01979 Amidohydrolase family FYA08_RS04205 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FYA08_RS04205 PF07992 Pyridine nucleotide-disulphide oxidoreductase FYA08_RS04210 PF12804 MobA-like NTP transferase domain FYA08_RS04220 PF13478 XdhC Rossmann domain FYA08_RS04220 PF02625 XdhC and CoxI family FYA08_RS04225 PF00696 Amino acid kinase family FYA08_RS04230 PF01979 Amidohydrolase family FYA08_RS04235 PF07687 Peptidase dimerisation domain FYA08_RS04235 PF01546 Peptidase family M20/M25/M40 FYA08_RS04240 PF00291 Pyridoxal-phosphate dependent enzyme FYA08_RS04245 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FYA08_RS04245 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FYA08_RS04250 PF13188 PAS domain FYA08_RS04250 PF00158 Sigma-54 interaction domain FYA08_RS04250 PF02954 Bacterial regulatory protein, Fis family FYA08_RS04255 PF00111 2Fe-2S iron-sulfur cluster binding domain FYA08_RS04255 PF01799 [2Fe-2S] binding domain FYA08_RS04260 PF03450 CO dehydrogenase flavoprotein C-terminal domain FYA08_RS04260 PF00941 FAD binding domain in molybdopterin dehydrogenase FYA08_RS04265 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FYA08_RS04265 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FYA08_RS04270 PF01476 LysM domain FYA08_RS04270 PF01551 Peptidase family M23 FYA08_RS04310 PF01464 Transglycosylase SLT domain FYA08_RS04320 PF00486 Transcriptional regulatory protein, C terminal FYA08_RS04325 PF07720 Tetratricopeptide repeat FYA08_RS04350 PF00486 Transcriptional regulatory protein, C terminal FYA08_RS04355 PF00196 Bacterial regulatory proteins, luxR family FYA08_RS04360 PF03222 Tryptophan/tyrosine permease family FYA08_RS04365 PF02803 Thiolase, C-terminal domain FYA08_RS04365 PF00108 Thiolase, N-terminal domain FYA08_RS04370 PF04962 KduI/IolB family FYA08_RS04380 PF00083 Sugar (and other) transporter FYA08_RS04385 PF01177 Asp/Glu/Hydantoin racemase FYA08_RS04390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS04390 PF03466 LysR substrate binding domain FYA08_RS04395 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FYA08_RS04395 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FYA08_RS04400 PF00356 Bacterial regulatory proteins, lacI family FYA08_RS04410 PF00501 AMP-binding enzyme FYA08_RS04410 PF01553 Acyltransferase FYA08_RS04415 PF07690 Major Facilitator Superfamily FYA08_RS04420 PF00248 Aldo/keto reductase family FYA08_RS04425 PF06004 Bacterial protein of unknown function (DUF903) FYA08_RS04430 PF03741 Integral membrane protein TerC family FYA08_RS04435 PF02976 DNA mismatch repair enzyme MutH FYA08_RS04445 PF00293 NUDIX domain FYA08_RS04450 PF00391 PEP-utilising enzyme, mobile domain FYA08_RS04450 PF01590 GAF domain FYA08_RS04450 PF02896 PEP-utilising enzyme, TIM barrel domain FYA08_RS04450 PF05524 PEP-utilising enzyme, N-terminal FYA08_RS04455 PF01790 Prolipoprotein diacylglyceryl transferase FYA08_RS04460 PF00303 Thymidylate synthase FYA08_RS04465 PF07963 Prokaryotic N-terminal methylation motif FYA08_RS04470 PF07963 Prokaryotic N-terminal methylation motif FYA08_RS04475 PF10713 Protein of unknown function (DUF2509) FYA08_RS04480 PF07963 Prokaryotic N-terminal methylation motif FYA08_RS04480 PF12528 Type II secretion prepilin peptidase dependent protein C FYA08_RS04485 PF17946 RecC C-terminal domain FYA08_RS04490 PF05193 Peptidase M16 inactive domain FYA08_RS04490 PF00675 Insulinase (Peptidase family M16) FYA08_RS04490 PF16187 Middle or third domain of peptidase_M16 FYA08_RS04495 PF13361 UvrD-like helicase C-terminal domain FYA08_RS04495 PF00580 UvrD/REP helicase N-terminal domain FYA08_RS04495 PF12705 PD-(D/E)XK nuclease superfamily FYA08_RS04500 PF13538 UvrD-like helicase C-terminal domain FYA08_RS04505 PF00696 Amino acid kinase family FYA08_RS04505 PF00583 Acetyltransferase (GNAT) family FYA08_RS04510 PF01520 N-acetylmuramoyl-L-alanine amidase FYA08_RS04510 PF11741 AMIN domain FYA08_RS04530 PF03562 MltA specific insert domain FYA08_RS04530 PF06725 3D domain FYA08_RS04535 PF00899 ThiF family FYA08_RS04540 PF02657 Fe-S metabolism associated domain FYA08_RS04545 PF00266 Aminotransferase class-V FYA08_RS04550 PF06004 Bacterial protein of unknown function (DUF903) FYA08_RS04555 PF03466 LysR substrate binding domain FYA08_RS04555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS04560 PF04241 Protein of unknown function (DUF423) FYA08_RS04565 PF18125 RlmM ferredoxin-like domain FYA08_RS04565 PF01728 FtsJ-like methyltransferase FYA08_RS04570 PF00455 DeoR C terminal sensor domain FYA08_RS04570 PF08220 DeoR-like helix-turn-helix domain FYA08_RS04575 PF05025 RbsD / FucU transport protein family FYA08_RS04580 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FYA08_RS04580 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FYA08_RS04585 PF02952 L-fucose isomerase, C-terminal domain FYA08_RS04585 PF07881 L-fucose isomerase, first N-terminal domain FYA08_RS04585 PF07882 L-fucose isomerase, second N-terminal domain FYA08_RS04590 PF07690 Major Facilitator Superfamily FYA08_RS04595 PF00596 Class II Aldolase and Adducin N-terminal domain FYA08_RS04600 PF00465 Iron-containing alcohol dehydrogenase FYA08_RS04605 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FYA08_RS04605 PF01367 5'-3' exonuclease, C-terminal SAM fold FYA08_RS04610 PF03313 Serine dehydratase alpha chain FYA08_RS04610 PF03315 Serine dehydratase beta chain FYA08_RS04620 PF03641 Possible lysine decarboxylase FYA08_RS04620 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases FYA08_RS04620 PF11892 Domain of unknown function (DUF3412) FYA08_RS04625 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FYA08_RS04625 PF14489 QueF-like protein FYA08_RS04630 PF07348 Syd protein (SUKH-2) FYA08_RS04635 PF04287 tRNA pseudouridine synthase C FYA08_RS04640 PF00849 RNA pseudouridylate synthase FYA08_RS04645 PF00258 Flavodoxin FYA08_RS04650 PF07690 Major Facilitator Superfamily FYA08_RS04655 PF13378 Enolase C-terminal domain-like FYA08_RS04655 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FYA08_RS04660 PF13378 Enolase C-terminal domain-like FYA08_RS04665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS04665 PF00672 HAMP domain FYA08_RS04665 PF00512 His Kinase A (phospho-acceptor) domain FYA08_RS04665 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FYA08_RS04665 PF01627 Hpt domain FYA08_RS04665 PF00072 Response regulator receiver domain FYA08_RS04670 PF05958 tRNA (Uracil-5-)-methyltransferase FYA08_RS04670 PF01938 TRAM domain FYA08_RS04675 PF04607 Region found in RelA / SpoT proteins FYA08_RS04675 PF02824 TGS domain FYA08_RS04675 PF13291 ACT domain FYA08_RS04680 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FYA08_RS04685 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system FYA08_RS04690 PF03819 MazG nucleotide pyrophosphohydrolase domain FYA08_RS04695 PF00117 Glutamine amidotransferase class-I FYA08_RS04695 PF06418 CTP synthase N-terminus FYA08_RS04700 PF00113 Enolase, C-terminal TIM barrel domain FYA08_RS04700 PF03952 Enolase, N-terminal domain FYA08_RS04705 PF04536 TPM domain FYA08_RS04715 PF04055 Radical SAM superfamily FYA08_RS04720 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FYA08_RS04720 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FYA08_RS04725 PF07690 Major Facilitator Superfamily FYA08_RS04735 PF01565 FAD binding domain FYA08_RS04735 PF02913 FAD linked oxidases, C-terminal domain FYA08_RS04740 PF00083 Sugar (and other) transporter FYA08_RS04745 PF01012 Electron transfer flavoprotein domain FYA08_RS04750 PF01012 Electron transfer flavoprotein domain FYA08_RS04750 PF00766 Electron transfer flavoprotein FAD-binding domain FYA08_RS04755 PF04309 Glycerol-3-phosphate responsive antiterminator FYA08_RS04765 PF01266 FAD dependent oxidoreductase FYA08_RS04770 PF01242 6-pyruvoyl tetrahydropterin synthase FYA08_RS04775 PF00175 Oxidoreductase NAD-binding domain FYA08_RS04775 PF00258 Flavodoxin FYA08_RS04775 PF00667 FAD binding domain FYA08_RS04780 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FYA08_RS04780 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FYA08_RS04785 PF01507 Phosphoadenosine phosphosulfate reductase family FYA08_RS04795 PF00271 Helicase conserved C-terminal domain FYA08_RS04795 PF00270 DEAD/DEAH box helicase FYA08_RS04795 PF18019 HD domain FYA08_RS04800 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) FYA08_RS04805 PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) FYA08_RS04810 PF09344 CT1975-like protein FYA08_RS04815 PF09704 CRISPR-associated protein (Cas_Cas5) FYA08_RS04820 PF08798 CRISPR associated protein FYA08_RS04825 PF01867 CRISPR associated protein Cas1 FYA08_RS04830 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) FYA08_RS04835 PF04389 Peptidase family M28 FYA08_RS04840 PF01507 Phosphoadenosine phosphosulfate reductase family FYA08_RS04845 PF00009 Elongation factor Tu GTP binding domain FYA08_RS04855 PF12084 Protein of unknown function (DUF3561) FYA08_RS04860 PF04977 Septum formation initiator FYA08_RS04865 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FYA08_RS04870 PF02542 YgbB family FYA08_RS04875 PF01142 tRNA pseudouridine synthase D (TruD) FYA08_RS04880 PF01975 Survival protein SurE FYA08_RS04890 PF01551 Peptidase family M23 FYA08_RS04890 PF01476 LysM domain FYA08_RS04900 PF02447 GntP family permease FYA08_RS04905 PF01261 Xylose isomerase-like TIM barrel FYA08_RS04910 PF00596 Class II Aldolase and Adducin N-terminal domain FYA08_RS04915 PF17042 Nucleotide-binding C-terminal domain FYA08_RS04915 PF07005 Sugar-binding N-terminal domain FYA08_RS04920 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FYA08_RS04920 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FYA08_RS04925 PF00455 DeoR C terminal sensor domain FYA08_RS04925 PF08220 DeoR-like helix-turn-helix domain FYA08_RS04930 PF00149 Calcineurin-like phosphoesterase FYA08_RS04935 PF00488 MutS domain V FYA08_RS04935 PF05188 MutS domain II FYA08_RS04935 PF01624 MutS domain I FYA08_RS04935 PF05190 MutS family domain IV FYA08_RS04935 PF05192 MutS domain III FYA08_RS04940 PF11756 Nitrous oxide-stimulated promoter FYA08_RS04945 PF00158 Sigma-54 interaction domain FYA08_RS04945 PF01590 GAF domain FYA08_RS04950 PF00586 AIR synthase related protein, N-terminal domain FYA08_RS04950 PF02769 AIR synthase related protein, C-terminal domain FYA08_RS04955 PF01924 Hydrogenase formation hypA family FYA08_RS04960 PF01455 HupF/HypC family FYA08_RS04965 PF02492 CobW/HypB/UreG, nucleotide-binding domain FYA08_RS04970 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FYA08_RS04980 PF11046 Transcriptional repressor of hyc and hyp operons FYA08_RS04985 PF13247 4Fe-4S dicluster domain FYA08_RS04990 PF00361 Proton-conducting membrane transporter FYA08_RS04995 PF00146 NADH dehydrogenase FYA08_RS05000 PF00374 Nickel-dependent hydrogenase FYA08_RS05000 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FYA08_RS05000 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FYA08_RS05005 PF12838 4Fe-4S dicluster domain FYA08_RS05010 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FYA08_RS05015 PF07450 Formate hydrogenlyase maturation protein HycH FYA08_RS05020 PF01750 Hydrogenase maturation protease FYA08_RS05025 PF00232 Glycosyl hydrolase family 1 FYA08_RS05030 PF02378 Phosphotransferase system, EIIC FYA08_RS05030 PF00367 phosphotransferase system, EIIB FYA08_RS05035 PF00356 Bacterial regulatory proteins, lacI family FYA08_RS05040 PF13247 4Fe-4S dicluster domain FYA08_RS05040 PF12800 4Fe-4S binding domain FYA08_RS05045 PF17788 HypF Kae1-like domain FYA08_RS05045 PF07503 HypF finger FYA08_RS05045 PF00708 Acylphosphatase FYA08_RS05045 PF01300 Telomere recombination FYA08_RS05050 PF07992 Pyridine nucleotide-disulphide oxidoreductase FYA08_RS05050 PF18113 Rubredoxin binding C-terminal domain FYA08_RS05055 PF00258 Flavodoxin FYA08_RS05055 PF00753 Metallo-beta-lactamase superfamily FYA08_RS05055 PF00301 Rubredoxin FYA08_RS05060 PF00158 Sigma-54 interaction domain FYA08_RS05060 PF01590 GAF domain FYA08_RS05065 PF01380 SIS domain FYA08_RS05065 PF00571 CBS domain FYA08_RS05070 PF08220 DeoR-like helix-turn-helix domain FYA08_RS05070 PF00455 DeoR C terminal sensor domain FYA08_RS05075 PF06923 Glucitol operon activator protein (GutM) FYA08_RS05080 PF00106 short chain dehydrogenase FYA08_RS05085 PF03829 PTS system glucitol/sorbitol-specific IIA component FYA08_RS05090 PF03612 Sorbitol phosphotransferase enzyme II N-terminus FYA08_RS05090 PF07663 Sorbitol phosphotransferase enzyme II C-terminus FYA08_RS05095 PF03608 PTS system enzyme II sorbitol-specific factor FYA08_RS05100 PF13406 Transglycosylase SLT domain FYA08_RS05105 PF02464 Competence-damaged protein FYA08_RS05110 PF00154 recA bacterial DNA recombination protein FYA08_RS05115 PF02631 RecX family FYA08_RS05120 PF01411 tRNA synthetases class II (A) FYA08_RS05120 PF02272 DHHA1 domain FYA08_RS05120 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FYA08_RS05125 PF02599 Global regulator protein family FYA08_RS05155 PF13419 Haloacid dehalogenase-like hydrolase FYA08_RS05160 PF09335 SNARE associated Golgi protein FYA08_RS05165 PF04262 Glutamate-cysteine ligase FYA08_RS05170 PF02664 S-Ribosylhomocysteinase (LuxS) FYA08_RS05175 PF07690 Major Facilitator Superfamily FYA08_RS05180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FYA08_RS05180 PF00529 HlyD membrane-fusion protein of T1SS FYA08_RS05185 PF01047 MarR family FYA08_RS05190 PF05437 Branched-chain amino acid transport protein (AzlD) FYA08_RS05195 PF03591 AzlC protein FYA08_RS05205 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FYA08_RS05210 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS05215 PF00571 CBS domain FYA08_RS05215 PF00005 ABC transporter FYA08_RS05220 PF00268 Ribonucleotide reductase, small chain FYA08_RS05225 PF00317 Ribonucleotide reductase, all-alpha domain FYA08_RS05225 PF08343 Ribonucleotide reductase N-terminal FYA08_RS05225 PF02867 Ribonucleotide reductase, barrel domain FYA08_RS05230 PF07972 NrdI Flavodoxin like FYA08_RS05235 PF00462 Glutaredoxin FYA08_RS05240 PF05957 Bacterial protein of unknown function (DUF883) FYA08_RS05245 PF09400 Protein of unknown function (DUF2002) FYA08_RS05250 PF06610 L-alanine exporter FYA08_RS05255 PF00816 H-NS histone family FYA08_RS05260 PF11127 Protein of unknown function (DUF2892) FYA08_RS05260 PF00581 Rhodanese-like domain FYA08_RS05265 PF01022 Bacterial regulatory protein, arsR family FYA08_RS05270 PF01679 Proteolipid membrane potential modulator FYA08_RS05275 PF01476 LysM domain FYA08_RS05275 PF04972 BON domain FYA08_RS05280 PF07729 FCD domain FYA08_RS05280 PF00392 Bacterial regulatory proteins, gntR family FYA08_RS05285 PF00324 Amino acid permease FYA08_RS05290 PF00202 Aminotransferase class-III FYA08_RS05295 PF00171 Aldehyde dehydrogenase family FYA08_RS05300 PF01266 FAD dependent oxidoreductase FYA08_RS05305 PF08943 CsiD FYA08_RS05315 PF00128 Alpha amylase, catalytic domain FYA08_RS05340 PF16168 Adhesin of bacterial autotransporter system, probable stalk FYA08_RS05340 PF03797 Autotransporter beta-domain FYA08_RS05340 PF03212 Pertactin FYA08_RS05345 PF06755 CbtA_toxin of type IV toxin-antitoxin system FYA08_RS05350 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A FYA08_RS05355 PF06174 Protein of unknown function (DUF987) FYA08_RS05360 PF04002 RadC-like JAB domain FYA08_RS05365 PF03230 Antirestriction protein FYA08_RS05405 PF08220 DeoR-like helix-turn-helix domain FYA08_RS05405 PF13280 WYL domain FYA08_RS05410 PF06067 Domain of unknown function (DUF932) FYA08_RS05415 PF01926 50S ribosome-binding GTPase FYA08_RS05420 PF15933 Antitoxin to bacterial toxin RNase LS or RnlA FYA08_RS05425 PF15935 RNase LS, bacterial toxin FYA08_RS05430 PF07510 Protein of unknown function (DUF1524) FYA08_RS05435 PF08878 Domain of unknown function (DUF1837) FYA08_RS05435 PF14130 Domain of unknown function (DUF4297) FYA08_RS05440 PF00271 Helicase conserved C-terminal domain FYA08_RS05450 PF13148 Protein of unknown function (DUF3987) FYA08_RS05455 PF05930 Prophage CP4-57 regulatory protein (AlpA) FYA08_RS05465 PF00589 Phage integrase family FYA08_RS05465 PF13356 Arm DNA-binding domain FYA08_RS05475 PF01668 SmpB protein FYA08_RS05480 PF03364 Polyketide cyclase / dehydrase and lipid transport FYA08_RS05485 PF03658 RnfH family Ubiquitin FYA08_RS05490 PF04355 SmpA / OmlA family FYA08_RS05495 PF02463 RecF/RecN/SMC N terminal domain FYA08_RS05500 PF01513 ATP-NAD kinase FYA08_RS05505 PF01025 GrpE FYA08_RS05510 PF01595 Cyclin M transmembrane N-terminal domain FYA08_RS05510 PF03471 Transporter associated domain FYA08_RS05510 PF00571 CBS domain FYA08_RS05515 PF01578 Cytochrome C assembly protein FYA08_RS05520 PF02978 Signal peptide binding domain FYA08_RS05520 PF02881 SRP54-type protein, helical bundle domain FYA08_RS05520 PF00448 SRP54-type protein, GTPase domain FYA08_RS05525 PF00886 Ribosomal protein S16 FYA08_RS05530 PF05239 PRC-barrel domain FYA08_RS05530 PF01782 RimM N-terminal domain FYA08_RS05535 PF01746 tRNA (Guanine-1)-methyltransferase FYA08_RS05540 PF01245 Ribosomal protein L19 FYA08_RS05545 PF00691 OmpA family FYA08_RS05550 PF17152 Periplasmic sensor domain FYA08_RS05550 PF00990 Diguanylate cyclase, GGDEF domain FYA08_RS05555 PF13689 YfiR/HmsC-like FYA08_RS05560 PF10973 Protein of unknown function (DUF2799) FYA08_RS05565 PF00793 DAHP synthetase I family FYA08_RS05570 PF01817 Chorismate mutase type II FYA08_RS05570 PF02153 Prephenate dehydrogenase FYA08_RS05575 PF00800 Prephenate dehydratase FYA08_RS05575 PF01817 Chorismate mutase type II FYA08_RS05585 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FYA08_RS05590 PF13525 Outer membrane lipoprotein FYA08_RS05595 PF01479 S4 domain FYA08_RS05595 PF00849 RNA pseudouridylate synthase FYA08_RS05600 PF02578 Multi-copper polyphenol oxidoreductase laccase FYA08_RS05605 PF10431 C-terminal, D2-small domain, of ClpB protein FYA08_RS05605 PF02861 Clp amino terminal domain, pathogenicity island component FYA08_RS05605 PF00004 ATPase family associated with various cellular activities (AAA) FYA08_RS05605 PF17871 AAA lid domain FYA08_RS05605 PF07724 AAA domain (Cdc48 subfamily) FYA08_RS05635 PF10043 Predicted periplasmic lipoprotein (DUF2279) FYA08_RS05640 PF13091 PLD-like domain FYA08_RS05645 PF13607 Succinyl-CoA ligase like flavodoxin domain FYA08_RS05645 PF00583 Acetyltransferase (GNAT) family FYA08_RS05645 PF13380 CoA binding domain FYA08_RS05650 PF03942 DTW domain FYA08_RS05655 PF00085 Thioredoxin FYA08_RS05660 PF08032 RNA 2'-O ribose methyltransferase substrate binding FYA08_RS05660 PF00588 SpoU rRNA Methylase family FYA08_RS05665 PF03167 Uracil DNA glycosylase superfamily FYA08_RS05670 PF01228 Glycine radical FYA08_RS05675 PF01810 LysE type translocator FYA08_RS05680 PF03466 LysR substrate binding domain FYA08_RS05680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS05685 PF00270 DEAD/DEAH box helicase FYA08_RS05685 PF00271 Helicase conserved C-terminal domain FYA08_RS05690 PF05175 Methyltransferase small domain FYA08_RS05695 PF00890 FAD binding domain FYA08_RS05695 PF02910 Fumarate reductase flavoprotein C-term FYA08_RS05705 PF04542 Sigma-70 region 2 FYA08_RS05705 PF08281 Sigma-70, region 4 FYA08_RS05710 PF03872 Anti sigma-E protein RseA, N-terminal domain FYA08_RS05710 PF03873 Anti sigma-E protein RseA, C-terminal domain FYA08_RS05715 PF17188 MucB/RseB C-terminal domain FYA08_RS05715 PF03888 MucB/RseB N-terminal domain FYA08_RS05725 PF06421 GTP-binding protein LepA C-terminus FYA08_RS05725 PF03144 Elongation factor Tu domain 2 FYA08_RS05725 PF00679 Elongation factor G C-terminus FYA08_RS05725 PF00009 Elongation factor Tu GTP binding domain FYA08_RS05730 PF10502 Signal peptidase, peptidase S26 FYA08_RS05735 PF00035 Double-stranded RNA binding motif FYA08_RS05735 PF14622 Ribonuclease-III-like FYA08_RS05740 PF07650 KH domain FYA08_RS05740 PF01926 50S ribosome-binding GTPase FYA08_RS05745 PF02565 Recombination protein O C terminal FYA08_RS05745 PF11967 Recombination protein O N terminal FYA08_RS05750 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FYA08_RS05755 PF01648 4'-phosphopantetheinyl transferase superfamily FYA08_RS05765 PF12838 4Fe-4S dicluster domain FYA08_RS05770 PF01380 SIS domain FYA08_RS05770 PF01418 Helix-turn-helix domain, rpiR family FYA08_RS05780 PF14437 MafB19-like deaminase FYA08_RS05785 PF00497 Bacterial extracellular solute-binding proteins, family 3 FYA08_RS05785 PF01464 Transglycosylase SLT domain FYA08_RS05790 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FYA08_RS05790 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FYA08_RS05790 PF02769 AIR synthase related protein, C-terminal domain FYA08_RS05795 PF00512 His Kinase A (phospho-acceptor) domain FYA08_RS05795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS05800 PF13942 YfhG lipoprotein FYA08_RS05805 PF00072 Response regulator receiver domain FYA08_RS05805 PF00158 Sigma-54 interaction domain FYA08_RS05810 PF00543 Nitrogen regulatory protein P-II FYA08_RS05815 PF00175 Oxidoreductase NAD-binding domain FYA08_RS05815 PF00042 Globin FYA08_RS05815 PF00970 Oxidoreductase FAD-binding domain FYA08_RS05820 PF00464 Serine hydroxymethyltransferase FYA08_RS05825 PF00480 ROK family FYA08_RS05830 PF13181 Tetratricopeptide repeat FYA08_RS05830 PF17128 Domain of unknown function (DUF5107) FYA08_RS05835 PF13407 Periplasmic binding protein domain FYA08_RS05840 PF00005 ABC transporter FYA08_RS05845 PF02653 Branched-chain amino acid transport system / permease component FYA08_RS05850 PF08240 Alcohol dehydrogenase GroES-like domain FYA08_RS05850 PF00107 Zinc-binding dehydrogenase FYA08_RS05855 PF01263 Aldose 1-epimerase FYA08_RS05860 PF07681 DoxX FYA08_RS05865 PF07992 Pyridine nucleotide-disulphide oxidoreductase FYA08_RS05865 PF14759 Reductase C-terminal FYA08_RS05870 PF00106 short chain dehydrogenase FYA08_RS05875 PF00355 Rieske [2Fe-2S] domain FYA08_RS05880 PF00866 Ring hydroxylating beta subunit FYA08_RS05885 PF00355 Rieske [2Fe-2S] domain FYA08_RS05885 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FYA08_RS05890 PF03466 LysR substrate binding domain FYA08_RS05890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS05895 PF12832 MFS_1 like family FYA08_RS05900 PF00874 PRD domain FYA08_RS05905 PF12146 Serine aminopeptidase, S33 FYA08_RS05910 PF00459 Inositol monophosphatase family FYA08_RS05915 PF00588 SpoU rRNA Methylase family FYA08_RS05920 PF02082 Transcriptional regulator FYA08_RS05925 PF00266 Aminotransferase class-V FYA08_RS05930 PF01592 NifU-like N terminal domain FYA08_RS05935 PF01521 Iron-sulphur cluster biosynthesis FYA08_RS05940 PF07743 HSCB C-terminal oligomerisation domain FYA08_RS05945 PF00012 Hsp70 protein FYA08_RS05950 PF00111 2Fe-2S iron-sulfur cluster binding domain FYA08_RS05955 PF04384 Iron-sulphur cluster assembly FYA08_RS05960 PF12404 Peptidase FYA08_RS05960 PF00883 Cytosol aminopeptidase family, catalytic domain FYA08_RS05965 PF07179 SseB protein N-terminal domain FYA08_RS05965 PF14581 SseB protein C-terminal domain FYA08_RS05970 PF00581 Rhodanese-like domain FYA08_RS05975 PF07678 A-macroglobulin TED domain FYA08_RS05975 PF01835 MG2 domain FYA08_RS05975 PF17962 Bacterial macroglobulin domain 6 FYA08_RS05975 PF11974 Bacterial alpha-2-macroglobulin MG3 domain FYA08_RS05975 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FYA08_RS05975 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain FYA08_RS05975 PF07703 Alpha-2-macroglobulin bait region domain FYA08_RS05975 PF00207 Alpha-2-macroglobulin family FYA08_RS05975 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain FYA08_RS05980 PF00912 Transglycosylase FYA08_RS05980 PF00905 Penicillin binding protein transpeptidase domain FYA08_RS05980 PF06832 Penicillin-Binding Protein C-terminus Family FYA08_RS05985 PF00334 Nucleoside diphosphate kinase FYA08_RS05990 PF04055 Radical SAM superfamily FYA08_RS05995 PF13464 Domain of unknown function (DUF4115) FYA08_RS06000 PF04551 GcpE protein FYA08_RS06005 PF03129 Anticodon binding domain FYA08_RS06005 PF13393 Histidyl-tRNA synthetase FYA08_RS06010 PF09976 Tetratricopeptide repeat-like domain FYA08_RS06015 PF13360 PQQ-like domain FYA08_RS06020 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FYA08_RS06020 PF01926 50S ribosome-binding GTPase FYA08_RS06025 PF07191 zinc-ribbons FYA08_RS06030 PF13742 OB-fold nucleic acid binding domain FYA08_RS06030 PF02601 Exonuclease VII, large subunit FYA08_RS06035 PF00478 IMP dehydrogenase / GMP reductase domain FYA08_RS06035 PF00571 CBS domain FYA08_RS06040 PF00117 Glutamine amidotransferase class-I FYA08_RS06040 PF02540 NAD synthase FYA08_RS06040 PF00958 GMP synthase C terminal domain FYA08_RS06045 PF17358 Family of unknown function (DUF5384) FYA08_RS06050 PF05433 Glycine zipper 2TM domain FYA08_RS06055 PF11119 Protein of unknown function (DUF2633) FYA08_RS06060 PF00563 EAL domain FYA08_RS06060 PF05231 MASE1 FYA08_RS06065 PF02541 Ppx/GppA phosphatase family FYA08_RS06070 PF13090 Polyphosphate kinase C-terminal domain 2 FYA08_RS06070 PF17941 Polyphosphate kinase C-terminal domain 1 FYA08_RS06070 PF13089 Polyphosphate kinase N-terminal domain FYA08_RS06070 PF02503 Polyphosphate kinase middle domain FYA08_RS06075 PF00551 Formyl transferase FYA08_RS06080 PF00586 AIR synthase related protein, N-terminal domain FYA08_RS06080 PF02769 AIR synthase related protein, C-terminal domain FYA08_RS06090 PF00860 Permease family FYA08_RS06095 PF00308 Bacterial dnaA protein FYA08_RS06100 PF03960 ArsC family FYA08_RS06105 PF01435 Peptidase family M48 FYA08_RS06110 PF01594 AI-2E family transporter FYA08_RS06115 PF01226 Formate/nitrite transporter FYA08_RS06120 PF00158 Sigma-54 interaction domain FYA08_RS06120 PF01590 GAF domain FYA08_RS06125 PF07450 Formate hydrogenlyase maturation protein HycH FYA08_RS06130 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FYA08_RS06135 PF12838 4Fe-4S dicluster domain FYA08_RS06140 PF00374 Nickel-dependent hydrogenase FYA08_RS06140 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FYA08_RS06140 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FYA08_RS06145 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FYA08_RS06145 PF00361 Proton-conducting membrane transporter FYA08_RS06150 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FYA08_RS06155 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FYA08_RS06155 PF00361 Proton-conducting membrane transporter FYA08_RS06160 PF00146 NADH dehydrogenase FYA08_RS06165 PF00361 Proton-conducting membrane transporter FYA08_RS06170 PF12798 4Fe-4S binding domain FYA08_RS06170 PF00037 4Fe-4S binding domain FYA08_RS06175 PF00578 AhpC/TSA family FYA08_RS06180 PF01842 ACT domain FYA08_RS06185 PF00701 Dihydrodipicolinate synthetase family FYA08_RS06190 PF06804 NlpB/DapX lipoprotein FYA08_RS06195 PF01259 SAICAR synthetase FYA08_RS06200 PF04228 Putative neutral zinc metallopeptidase FYA08_RS06205 PF08351 Domain of unknown function (DUF1726) FYA08_RS06205 PF13718 GNAT acetyltransferase 2 FYA08_RS06205 PF17176 tRNA-binding domain FYA08_RS06205 PF05127 Helicase FYA08_RS06210 PF02230 Phospholipase/Carboxylesterase FYA08_RS06215 PF13980 Uncharacterised protein family (UPF0370) FYA08_RS06220 PF07687 Peptidase dimerisation domain FYA08_RS06220 PF01546 Peptidase family M20/M25/M40 FYA08_RS06225 PF03960 ArsC family FYA08_RS06235 PF00873 AcrB/AcrD/AcrF family FYA08_RS06240 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FYA08_RS06240 PF07730 Histidine kinase FYA08_RS06240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS06240 PF00672 HAMP domain FYA08_RS06245 PF07992 Pyridine nucleotide-disulphide oxidoreductase FYA08_RS06245 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FYA08_RS06245 PF13247 4Fe-4S dicluster domain FYA08_RS06250 PF00293 NUDIX domain FYA08_RS06255 PF06674 Protein of unknown function (DUF1176) FYA08_RS06260 PF00456 Transketolase, thiamine diphosphate binding domain FYA08_RS06260 PF02780 Transketolase, C-terminal domain FYA08_RS06260 PF02779 Transketolase, pyrimidine binding domain FYA08_RS06265 PF00923 Transaldolase/Fructose-6-phosphate aldolase FYA08_RS06270 PF00390 Malic enzyme, N-terminal domain FYA08_RS06270 PF03949 Malic enzyme, NAD binding domain FYA08_RS06270 PF01515 Phosphate acetyl/butaryl transferase FYA08_RS06275 PF00936 BMC domain FYA08_RS06280 PF10662 Ethanolamine utilisation - propanediol utilisation FYA08_RS06285 PF06249 Ethanolamine utilisation protein EutQ FYA08_RS06290 PF01923 Cobalamin adenosyltransferase FYA08_RS06295 PF01515 Phosphate acetyl/butaryl transferase FYA08_RS06300 PF00936 BMC domain FYA08_RS06305 PF03319 Ethanolamine utilisation protein EutN/carboxysome FYA08_RS06310 PF00171 Aldehyde dehydrogenase family FYA08_RS06320 PF00465 Iron-containing alcohol dehydrogenase FYA08_RS06325 PF04346 Ethanolamine utilisation protein, EutH FYA08_RS06330 PF06277 Ethanolamine utilisation protein EutA FYA08_RS06335 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FYA08_RS06340 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FYA08_RS06345 PF00936 BMC domain FYA08_RS06350 PF00936 BMC domain FYA08_RS06350 PF16365 Ethanolamine utilization protein EutK C-terminus FYA08_RS06355 PF12833 Helix-turn-helix domain FYA08_RS06360 PF01218 Coproporphyrinogen III oxidase FYA08_RS06365 PF01520 N-acetylmuramoyl-L-alanine amidase FYA08_RS06370 PF00583 Acetyltransferase (GNAT) family FYA08_RS06375 PF11143 Protein of unknown function (DUF2919) FYA08_RS06380 PF06572 Protein of unknown function (DUF1131) FYA08_RS06385 PF04261 Dyp-type peroxidase family FYA08_RS06390 PF00144 Beta-lactamase FYA08_RS06395 PF00367 phosphotransferase system, EIIB FYA08_RS06395 PF02378 Phosphotransferase system, EIIC FYA08_RS06400 PF01380 SIS domain FYA08_RS06405 PF01418 Helix-turn-helix domain, rpiR family FYA08_RS06405 PF01380 SIS domain FYA08_RS06420 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS06425 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS06430 PF00005 ABC transporter FYA08_RS06435 PF00291 Pyridoxal-phosphate dependent enzyme FYA08_RS06440 PF05406 WGR domain FYA08_RS06445 PF17263 Family of unknown function (DUF5329) FYA08_RS06450 PF08543 Phosphomethylpyrimidine kinase FYA08_RS06455 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FYA08_RS06460 PF05524 PEP-utilising enzyme, N-terminal FYA08_RS06460 PF02896 PEP-utilising enzyme, TIM barrel domain FYA08_RS06460 PF00391 PEP-utilising enzyme, mobile domain FYA08_RS06465 PF00381 PTS HPr component phosphorylation site FYA08_RS06470 PF00291 Pyridoxal-phosphate dependent enzyme FYA08_RS06480 PF04354 ZipA, C-terminal FtsZ-binding domain FYA08_RS06485 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FYA08_RS06485 PF03120 NAD-dependent DNA ligase OB-fold domain FYA08_RS06485 PF00533 BRCA1 C Terminus (BRCT) domain FYA08_RS06485 PF01653 NAD-dependent DNA ligase adenylation domain FYA08_RS06485 PF12826 Helix-hairpin-helix motif FYA08_RS06490 PF12843 Putative quorum-sensing-regulated virulence factor FYA08_RS06495 PF13593 SBF-like CPA transporter family (DUF4137) FYA08_RS06500 PF03466 LysR substrate binding domain FYA08_RS06500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS06505 PF03502 Nucleoside-specific channel-forming protein, Tsx FYA08_RS06510 PF01048 Phosphorylase superfamily FYA08_RS06515 PF03825 Nucleoside H+ symporter FYA08_RS06525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS06525 PF03466 LysR substrate binding domain FYA08_RS06555 PF00749 tRNA synthetases class I (E and Q), catalytic domain FYA08_RS06560 PF07037 Putative transcription regulator (DUF1323) FYA08_RS06565 PF07037 Putative transcription regulator (DUF1323) FYA08_RS06580 PF05231 MASE1 FYA08_RS06580 PF00563 EAL domain FYA08_RS06585 PF01609 Transposase DDE domain FYA08_RS06590 PF07670 Nucleoside recognition FYA08_RS06590 PF07662 Na+ dependent nucleoside transporter C-terminus FYA08_RS06590 PF01773 Na+ dependent nucleoside transporter N-terminus FYA08_RS06595 PF01566 Natural resistance-associated macrophage protein FYA08_RS06600 PF10697 Protein of unknown function (DUF2502) FYA08_RS06605 PF00654 Voltage gated chloride channel FYA08_RS06610 PF02685 Glucokinase FYA08_RS06615 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FYA08_RS06620 PF02378 Phosphotransferase system, EIIC FYA08_RS06625 PF01321 Creatinase/Prolidase N-terminal domain FYA08_RS06625 PF00557 Metallopeptidase family M24 FYA08_RS06630 PF05343 M42 glutamyl aminopeptidase FYA08_RS06635 PF02896 PEP-utilising enzyme, TIM barrel domain FYA08_RS06635 PF00391 PEP-utilising enzyme, mobile domain FYA08_RS06635 PF05524 PEP-utilising enzyme, N-terminal FYA08_RS06635 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FYA08_RS06635 PF00381 PTS HPr component phosphorylation site FYA08_RS06640 PF12833 Helix-turn-helix domain FYA08_RS06645 PF00072 Response regulator receiver domain FYA08_RS06645 PF04397 LytTr DNA-binding domain FYA08_RS06650 PF07694 5TMR of 5TMR-LYT FYA08_RS06650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS06650 PF06580 Histidine kinase FYA08_RS06655 PF00155 Aminotransferase class I and II FYA08_RS06665 PF03279 Bacterial lipid A biosynthesis acyltransferase FYA08_RS06670 PF10810 Protein of unknown function (DUF2545) FYA08_RS06680 PF10938 YfdX protein FYA08_RS06685 PF02515 CoA-transferase family III FYA08_RS06690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FYA08_RS06690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FYA08_RS06690 PF00205 Thiamine pyrophosphate enzyme, central domain FYA08_RS06695 PF03547 Membrane transport protein FYA08_RS06700 PF02515 CoA-transferase family III FYA08_RS06705 PF00512 His Kinase A (phospho-acceptor) domain FYA08_RS06705 PF01627 Hpt domain FYA08_RS06705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS06705 PF00072 Response regulator receiver domain FYA08_RS06705 PF00497 Bacterial extracellular solute-binding proteins, family 3 FYA08_RS06710 PF00196 Bacterial regulatory proteins, luxR family FYA08_RS06710 PF00072 Response regulator receiver domain FYA08_RS06715 PF00529 HlyD membrane-fusion protein of T1SS FYA08_RS06715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FYA08_RS06720 PF07690 Major Facilitator Superfamily FYA08_RS06725 PF00291 Pyridoxal-phosphate dependent enzyme FYA08_RS06730 PF02447 GntP family permease FYA08_RS06735 PF03466 LysR substrate binding domain FYA08_RS06735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS06760 PF10065 Uncharacterized conserved protein (DUF2303) FYA08_RS06775 PF06069 PerC transcriptional activator FYA08_RS06780 PF05869 DNA N-6-adenine-methyltransferase (Dam) FYA08_RS06790 PF02413 Caudovirales tail fibre assembly protein, lambda gpK FYA08_RS06820 PF04138 GtrA-like protein FYA08_RS06825 PF13356 Arm DNA-binding domain FYA08_RS06825 PF00589 Phage integrase family FYA08_RS06825 PF14659 Phage integrase, N-terminal SAM-like domain FYA08_RS06835 PF01226 Formate/nitrite transporter FYA08_RS06840 PF04333 MlaA lipoprotein FYA08_RS06850 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FYA08_RS06855 PF04175 Protein of unknown function (DUF406) FYA08_RS06860 PF02803 Thiolase, C-terminal domain FYA08_RS06860 PF00108 Thiolase, N-terminal domain FYA08_RS06865 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FYA08_RS06865 PF00378 Enoyl-CoA hydratase/isomerase FYA08_RS06865 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FYA08_RS06870 PF00300 Histidine phosphatase superfamily (branch 1) FYA08_RS06875 PF00419 Fimbrial protein FYA08_RS06885 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FYA08_RS06885 PF02753 Pili assembly chaperone PapD, C-terminal domain FYA08_RS06890 PF00419 Fimbrial protein FYA08_RS06895 PF00419 Fimbrial protein FYA08_RS06900 PF00419 Fimbrial protein FYA08_RS06905 PF11245 Protein of unknown function (DUF2544) FYA08_RS06910 PF01713 Smr domain FYA08_RS06915 PF05175 Methyltransferase small domain FYA08_RS06920 PF01264 Chorismate synthase FYA08_RS06925 PF03411 Penicillin-insensitive murein endopeptidase FYA08_RS06930 PF01925 Sulfite exporter TauE/SafE FYA08_RS06935 PF04315 Elongation factor P hydroxylase FYA08_RS06940 PF08891 YfcL protein FYA08_RS06945 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FYA08_RS06945 PF01266 FAD dependent oxidoreductase FYA08_RS06950 PF00109 Beta-ketoacyl synthase, N-terminal domain FYA08_RS06950 PF02801 Beta-ketoacyl synthase, C-terminal domain FYA08_RS06955 PF07690 Major Facilitator Superfamily FYA08_RS06965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FYA08_RS06965 PF11890 Domain of unknown function (DUF3410) FYA08_RS06965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FYA08_RS06970 PF01118 Semialdehyde dehydrogenase, NAD binding domain FYA08_RS06970 PF02774 Semialdehyde dehydrogenase, dimerisation domain FYA08_RS06975 PF01416 tRNA pseudouridine synthase FYA08_RS06980 PF09335 SNARE associated Golgi protein FYA08_RS06985 PF01039 Carboxyl transferase domain FYA08_RS06985 PF17848 Acetyl-coA carboxylase zinc finger domain FYA08_RS06990 PF02875 Mur ligase family, glutamate ligase domain FYA08_RS06990 PF08245 Mur ligase middle domain FYA08_RS06995 PF05036 Sporulation related domain FYA08_RS07000 PF02674 Colicin V production protein FYA08_RS07005 PF00156 Phosphoribosyl transferase domain FYA08_RS07010 PF02441 Flavoprotein FYA08_RS07015 PF00497 Bacterial extracellular solute-binding proteins, family 3 FYA08_RS07020 PF00497 Bacterial extracellular solute-binding proteins, family 3 FYA08_RS07025 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS07030 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS07035 PF00005 ABC transporter FYA08_RS07040 PF04754 Putative transposase, YhgA-like FYA08_RS07045 PF08338 Domain of unknown function (DUF1731) FYA08_RS07045 PF01370 NAD dependent epimerase/dehydratase family FYA08_RS07050 PF02152 Dihydroneopterin aldolase FYA08_RS07055 PF00043 Glutathione S-transferase, C-terminal domain FYA08_RS07055 PF02798 Glutathione S-transferase, N-terminal domain FYA08_RS07060 PF14834 Glutathione S-transferase, C-terminal domain FYA08_RS07060 PF02798 Glutathione S-transferase, N-terminal domain FYA08_RS07065 PF12850 Calcineurin-like phosphoesterase superfamily domain FYA08_RS07070 PF00293 NUDIX domain FYA08_RS07075 PF03606 C4-dicarboxylate anaerobic carrier FYA08_RS07080 PF07085 DRTGG domain FYA08_RS07080 PF01515 Phosphate acetyl/butaryl transferase FYA08_RS07085 PF00871 Acetokinase family FYA08_RS07090 PF04217 Protein of unknown function, DUF412 FYA08_RS07095 PF03887 YfbU domain FYA08_RS07100 PF13419 Haloacid dehalogenase-like hydrolase FYA08_RS07105 PF03600 Citrate transporter FYA08_RS07105 PF02080 TrkA-C domain FYA08_RS07115 PF00155 Aminotransferase class I and II FYA08_RS07120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS07120 PF03466 LysR substrate binding domain FYA08_RS07125 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FYA08_RS07130 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FYA08_RS07135 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FYA08_RS07135 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FYA08_RS07145 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FYA08_RS07145 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FYA08_RS07145 PF10531 SLBB domain FYA08_RS07150 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FYA08_RS07150 PF01568 Molydopterin dinucleotide binding domain FYA08_RS07150 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FYA08_RS07150 PF00384 Molybdopterin oxidoreductase FYA08_RS07155 PF00146 NADH dehydrogenase FYA08_RS07160 PF12838 4Fe-4S dicluster domain FYA08_RS07165 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FYA08_RS07170 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FYA08_RS07175 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FYA08_RS07175 PF00361 Proton-conducting membrane transporter FYA08_RS07180 PF00361 Proton-conducting membrane transporter FYA08_RS07185 PF00361 Proton-conducting membrane transporter FYA08_RS07205 PF08974 Domain of unknown function (DUF1877) FYA08_RS07210 PF04389 Peptidase family M28 FYA08_RS07215 PF12034 Domain of unknown function (DUF3520) FYA08_RS07215 PF00092 von Willebrand factor type A domain FYA08_RS07215 PF12450 von Willebrand factor FYA08_RS07220 PF02902 Ulp1 protease family, C-terminal catalytic domain FYA08_RS07225 PF12706 Beta-lactamase superfamily domain FYA08_RS07230 PF13673 Acetyltransferase (GNAT) domain FYA08_RS07235 PF05957 Bacterial protein of unknown function (DUF883) FYA08_RS07240 PF00425 chorismate binding enzyme FYA08_RS07245 PF16582 Middle domain of thiamine pyrophosphate FYA08_RS07245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FYA08_RS07245 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FYA08_RS07250 PF12697 Alpha/beta hydrolase family FYA08_RS07255 PF00378 Enoyl-CoA hydratase/isomerase FYA08_RS07260 PF13378 Enolase C-terminal domain-like FYA08_RS07265 PF13193 AMP-binding enzyme C-terminal domain FYA08_RS07265 PF00501 AMP-binding enzyme FYA08_RS07280 PF00892 EamA-like transporter family FYA08_RS07285 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase FYA08_RS07290 PF01522 Polysaccharide deacetylase FYA08_RS07295 PF00551 Formyl transferase FYA08_RS07295 PF02911 Formyl transferase, C-terminal domain FYA08_RS07295 PF01370 NAD dependent epimerase/dehydratase family FYA08_RS07300 PF00535 Glycosyl transferase family 2 FYA08_RS07305 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FYA08_RS07310 PF00300 Histidine phosphatase superfamily (branch 1) FYA08_RS07315 PF00293 NUDIX domain FYA08_RS07320 PF07437 YfaZ precursor FYA08_RS07325 PF00994 Probable molybdopterin binding domain FYA08_RS07330 PF09339 IclR helix-turn-helix domain FYA08_RS07330 PF01614 Bacterial transcriptional regulator FYA08_RS07335 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FYA08_RS07335 PF13378 Enolase C-terminal domain-like FYA08_RS07340 PF07690 Major Facilitator Superfamily FYA08_RS07345 PF03328 HpcH/HpaI aldolase/citrate lyase family FYA08_RS07355 PF04754 Putative transposase, YhgA-like FYA08_RS07360 PF02754 Cysteine-rich domain FYA08_RS07360 PF13183 4Fe-4S dicluster domain FYA08_RS07365 PF00890 FAD binding domain FYA08_RS07370 PF04324 BFD-like [2Fe-2S] binding domain FYA08_RS07370 PF01266 FAD dependent oxidoreductase FYA08_RS07375 PF07690 Major Facilitator Superfamily FYA08_RS07380 PF03009 Glycerophosphoryl diester phosphodiesterase family FYA08_RS07395 PF00111 2Fe-2S iron-sulfur cluster binding domain FYA08_RS07400 PF00268 Ribonucleotide reductase, small chain FYA08_RS07405 PF03477 ATP cone domain FYA08_RS07405 PF02867 Ribonucleotide reductase, barrel domain FYA08_RS07405 PF00317 Ribonucleotide reductase, all-alpha domain FYA08_RS07410 PF12951 Passenger-associated-transport-repeat FYA08_RS07410 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat FYA08_RS07410 PF03797 Autotransporter beta-domain FYA08_RS07420 PF03989 DNA gyrase C-terminal domain, beta-propeller FYA08_RS07420 PF00521 DNA gyrase/topoisomerase IV, subunit A FYA08_RS07425 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) FYA08_RS07430 PF06672 Protein of unknown function (DUF1175) FYA08_RS07440 PF08486 Stage II sporulation protein FYA08_RS07440 PF10062 Predicted secreted protein (DUF2300) FYA08_RS07445 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) FYA08_RS07450 PF00108 Thiolase, N-terminal domain FYA08_RS07450 PF02803 Thiolase, C-terminal domain FYA08_RS07455 PF02667 Short chain fatty acid transporter FYA08_RS07460 PF01144 Coenzyme A transferase FYA08_RS07465 PF01144 Coenzyme A transferase FYA08_RS07470 PF00158 Sigma-54 interaction domain FYA08_RS07470 PF02954 Bacterial regulatory protein, Fis family FYA08_RS07470 PF00072 Response regulator receiver domain FYA08_RS07475 PF00989 PAS fold FYA08_RS07475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS07475 PF00512 His Kinase A (phospho-acceptor) domain FYA08_RS07480 PF09456 RcsC Alpha-Beta-Loop (ABL) FYA08_RS07480 PF00072 Response regulator receiver domain FYA08_RS07480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS07480 PF00512 His Kinase A (phospho-acceptor) domain FYA08_RS07485 PF00072 Response regulator receiver domain FYA08_RS07485 PF00196 Bacterial regulatory proteins, luxR family FYA08_RS07490 PF16359 RcsD-ABL domain FYA08_RS07490 PF01627 Hpt domain FYA08_RS07490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS07495 PF00267 Gram-negative porin FYA08_RS07500 PF02424 ApbE family FYA08_RS07505 PF02805 Metal binding domain of Ada FYA08_RS07505 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FYA08_RS07505 PF12833 Helix-turn-helix domain FYA08_RS07505 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FYA08_RS07510 PF13532 2OG-Fe(II) oxygenase superfamily FYA08_RS07515 PF00005 ABC transporter FYA08_RS07520 PF06039 Malate:quinone oxidoreductase (Mqo) FYA08_RS07525 PF03974 Ecotin FYA08_RS07530 PF00037 4Fe-4S binding domain FYA08_RS07530 PF12800 4Fe-4S binding domain FYA08_RS07530 PF13187 4Fe-4S dicluster domain FYA08_RS07535 PF03927 NapD protein FYA08_RS07540 PF01568 Molydopterin dinucleotide binding domain FYA08_RS07540 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FYA08_RS07540 PF00384 Molybdopterin oxidoreductase FYA08_RS07545 PF12838 4Fe-4S dicluster domain FYA08_RS07545 PF12800 4Fe-4S binding domain FYA08_RS07550 PF13237 4Fe-4S dicluster domain FYA08_RS07550 PF12801 4Fe-4S binding domain FYA08_RS07555 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FYA08_RS07560 PF03264 NapC/NirT cytochrome c family, N-terminal region FYA08_RS07565 PF00005 ABC transporter FYA08_RS07570 PF03379 CcmB protein FYA08_RS07575 PF01578 Cytochrome C assembly protein FYA08_RS07580 PF04995 Heme exporter protein D (CcmD) FYA08_RS07585 PF03100 CcmE FYA08_RS07590 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FYA08_RS07590 PF01578 Cytochrome C assembly protein FYA08_RS07595 PF08534 Redoxin FYA08_RS07600 PF03918 Cytochrome C biogenesis protein FYA08_RS07605 PF00072 Response regulator receiver domain FYA08_RS07605 PF00196 Bacterial regulatory proteins, luxR family FYA08_RS07610 PF05598 Transposase domain (DUF772) FYA08_RS07610 PF01609 Transposase DDE domain FYA08_RS07625 PF11893 Domain of unknown function (DUF3413) FYA08_RS07625 PF00884 Sulfatase FYA08_RS07630 PF07208 Protein of unknown function (DUF1414) FYA08_RS07635 PF04245 37-kD nucleoid-associated bacterial protein FYA08_RS07640 PF01386 Ribosomal L25p family FYA08_RS07645 PF00271 Helicase conserved C-terminal domain FYA08_RS07645 PF04851 Type III restriction enzyme, res subunit FYA08_RS07650 PF00849 RNA pseudouridylate synthase FYA08_RS07650 PF01479 S4 domain FYA08_RS07655 PF07690 Major Facilitator Superfamily FYA08_RS07660 PF13989 YejG-like protein FYA08_RS07665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FYA08_RS07665 PF00005 ABC transporter FYA08_RS07670 PF12911 N-terminal TM domain of oligopeptide transport permease C FYA08_RS07670 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS07675 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS07680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FYA08_RS07685 PF12792 CSS motif domain associated with EAL FYA08_RS07685 PF00563 EAL domain FYA08_RS07690 PF00877 NlpC/P60 family FYA08_RS07695 PF01569 PAP2 superfamily FYA08_RS07700 PF02492 CobW/HypB/UreG, nucleotide-binding domain FYA08_RS07700 PF07683 Cobalamin synthesis protein cobW C-terminal domain FYA08_RS07705 PF08125 Mannitol dehydrogenase C-terminal domain FYA08_RS07705 PF01232 Mannitol dehydrogenase Rossmann domain FYA08_RS07710 PF01132 Elongation factor P (EF-P) OB domain FYA08_RS07710 PF08207 Elongation factor P (EF-P) KOW-like domain FYA08_RS07710 PF09285 Elongation factor P, C-terminal FYA08_RS07715 PF03692 Putative zinc- or iron-chelating domain FYA08_RS07720 PF07690 Major Facilitator Superfamily FYA08_RS07725 PF00381 PTS HPr component phosphorylation site FYA08_RS07725 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FYA08_RS07730 PF00294 pfkB family carbohydrate kinase FYA08_RS07735 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FYA08_RS07735 PF02378 Phosphotransferase system, EIIC FYA08_RS07740 PF00294 pfkB family carbohydrate kinase FYA08_RS07745 PF04227 Indigoidine synthase A like protein FYA08_RS07750 PF01773 Na+ dependent nucleoside transporter N-terminus FYA08_RS07750 PF07662 Na+ dependent nucleoside transporter C-terminus FYA08_RS07755 PF00027 Cyclic nucleotide-binding domain FYA08_RS07760 PF01156 Inosine-uridine preferring nucleoside hydrolase FYA08_RS07765 PF01773 Na+ dependent nucleoside transporter N-terminus FYA08_RS07765 PF07662 Na+ dependent nucleoside transporter C-terminus FYA08_RS07770 PF00294 pfkB family carbohydrate kinase FYA08_RS07775 PF01261 Xylose isomerase-like TIM barrel FYA08_RS07780 PF03601 Conserved hypothetical protein 698 FYA08_RS07785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS07785 PF03466 LysR substrate binding domain FYA08_RS07790 PF00324 Amino acid permease FYA08_RS07795 PF00593 TonB dependent receptor FYA08_RS07795 PF07715 TonB-dependent Receptor Plug Domain FYA08_RS07800 PF00756 Putative esterase FYA08_RS07805 PF01227 GTP cyclohydrolase I FYA08_RS07810 PF04235 Protein of unknown function (DUF418) FYA08_RS07815 PF00356 Bacterial regulatory proteins, lacI family FYA08_RS07820 PF13407 Periplasmic binding protein domain FYA08_RS07825 PF00005 ABC transporter FYA08_RS07830 PF02653 Branched-chain amino acid transport system / permease component FYA08_RS07835 PF01180 Dihydroorotate dehydrogenase FYA08_RS07840 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FYA08_RS07840 PF07992 Pyridine nucleotide-disulphide oxidoreductase FYA08_RS07845 PF10808 Protein of unknown function (DUF2542) FYA08_RS07850 PF02698 DUF218 domain FYA08_RS07855 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FYA08_RS07855 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region FYA08_RS07860 PF04172 LrgB-like family FYA08_RS07865 PF03788 LrgA family FYA08_RS07870 PF01207 Dihydrouridine synthase (Dus) FYA08_RS07890 PF09335 SNARE associated Golgi protein FYA08_RS07895 PF04893 Yip1 domain FYA08_RS07900 PF00768 D-alanyl-D-alanine carboxypeptidase FYA08_RS07905 PF01565 FAD binding domain FYA08_RS07905 PF09330 D-lactate dehydrogenase, membrane binding FYA08_RS07910 PF14310 Fibronectin type III-like domain FYA08_RS07910 PF00933 Glycosyl hydrolase family 3 N terminal domain FYA08_RS07910 PF01915 Glycosyl hydrolase family 3 C-terminal domain FYA08_RS07915 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FYA08_RS07920 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS07925 PF00005 ABC transporter FYA08_RS07930 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS07940 PF13411 MerR HTH family regulatory protein FYA08_RS07945 PF07694 5TMR of 5TMR-LYT FYA08_RS07945 PF06580 Histidine kinase FYA08_RS07950 PF00072 Response regulator receiver domain FYA08_RS07950 PF04397 LytTr DNA-binding domain FYA08_RS07955 PF07308 Protein of unknown function (DUF1456) FYA08_RS07960 PF06998 Protein of unknown function (DUF1307) FYA08_RS07970 PF05762 VWA domain containing CoxE-like protein FYA08_RS07980 PF07728 AAA domain (dynein-related subfamily) FYA08_RS07990 PF13569 Domain of unknown function (DUF4132) FYA08_RS08000 PF01588 Putative tRNA binding domain FYA08_RS08000 PF09334 tRNA synthetases class I (M) FYA08_RS08005 PF10609 NUBPL iron-transfer P-loop NTPase FYA08_RS08010 PF10836 Protein of unknown function (DUF2574) FYA08_RS08015 PF00419 Fimbrial protein FYA08_RS08020 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FYA08_RS08020 PF02753 Pili assembly chaperone PapD, C-terminal domain FYA08_RS08025 PF13954 PapC N-terminal domain FYA08_RS08025 PF00577 Outer membrane usher protein FYA08_RS08025 PF13953 PapC C-terminal domain FYA08_RS08030 PF00419 Fimbrial protein FYA08_RS08035 PF11776 Nickel/cobalt transporter regulator FYA08_RS08040 PF03824 High-affinity nickel-transport protein FYA08_RS08045 PF02583 Metal-sensitive transcriptional repressor FYA08_RS08050 PF02110 Hydroxyethylthiazole kinase family FYA08_RS08055 PF08543 Phosphomethylpyrimidine kinase FYA08_RS08060 PF01183 Glycosyl hydrolases family 25 FYA08_RS08065 PF07702 UTRA domain FYA08_RS08065 PF00392 Bacterial regulatory proteins, gntR family FYA08_RS08070 PF00294 pfkB family carbohydrate kinase FYA08_RS08075 PF03747 ADP-ribosylglycohydrolase FYA08_RS08080 PF03825 Nucleoside H+ symporter FYA08_RS08085 PF01791 DeoC/LacD family aldolase FYA08_RS08095 PF01116 Fructose-bisphosphate aldolase class-II FYA08_RS08100 PF08013 Tagatose 6 phosphate kinase FYA08_RS08105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FYA08_RS08110 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FYA08_RS08115 PF03611 PTS system sugar-specific permease component FYA08_RS08120 PF00107 Zinc-binding dehydrogenase FYA08_RS08120 PF08240 Alcohol dehydrogenase GroES-like domain FYA08_RS08140 PF00781 Diacylglycerol kinase catalytic domain FYA08_RS08160 PF04606 Ogr/Delta-like zinc finger FYA08_RS08165 PF01136 Peptidase family U32 FYA08_RS08165 PF16325 Peptidase family U32 C-terminal domain FYA08_RS08170 PF07411 Domain of unknown function (DUF1508) FYA08_RS08175 PF00072 Response regulator receiver domain FYA08_RS08175 PF00486 Transcriptional regulatory protein, C terminal FYA08_RS08180 PF00672 HAMP domain FYA08_RS08180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS08180 PF00512 His Kinase A (phospho-acceptor) domain FYA08_RS08185 PF07690 Major Facilitator Superfamily FYA08_RS08190 PF00873 AcrB/AcrD/AcrF family FYA08_RS08195 PF00873 AcrB/AcrD/AcrF family FYA08_RS08200 PF13533 Biotin-lipoyl like FYA08_RS08215 PF00092 von Willebrand factor type A domain FYA08_RS08225 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) FYA08_RS08235 PF00012 Hsp70 protein FYA08_RS08240 PF06029 AlkA N-terminal domain FYA08_RS08240 PF00730 HhH-GPD superfamily base excision DNA repair protein FYA08_RS08245 PF08447 PAS fold FYA08_RS08245 PF08448 PAS fold FYA08_RS08245 PF13426 PAS domain FYA08_RS08245 PF05231 MASE1 FYA08_RS08245 PF00990 Diguanylate cyclase, GGDEF domain FYA08_RS08245 PF00563 EAL domain FYA08_RS08250 PF00485 Phosphoribulokinase / Uridine kinase family FYA08_RS08255 PF00692 dUTPase FYA08_RS08260 PF05170 AsmA family FYA08_RS08265 PF00571 CBS domain FYA08_RS08265 PF03471 Transporter associated domain FYA08_RS08265 PF03741 Integral membrane protein TerC family FYA08_RS08270 PF10531 SLBB domain FYA08_RS08270 PF02563 Polysaccharide biosynthesis/export protein FYA08_RS08270 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FYA08_RS08275 PF01451 Low molecular weight phosphotyrosine protein phosphatase FYA08_RS08280 PF02706 Chain length determinant protein FYA08_RS08280 PF13614 AAA domain FYA08_RS08280 PF13807 G-rich domain on putative tyrosine kinase FYA08_RS08285 PF00535 Glycosyl transferase family 2 FYA08_RS08290 PF00132 Bacterial transferase hexapeptide (six repeats) FYA08_RS08295 PF00534 Glycosyl transferases group 1 FYA08_RS08295 PF13439 Glycosyltransferase Family 4 FYA08_RS08305 PF00535 Glycosyl transferase family 2 FYA08_RS08310 PF00132 Bacterial transferase hexapeptide (six repeats) FYA08_RS08315 PF16363 GDP-mannose 4,6 dehydratase FYA08_RS08320 PF01370 NAD dependent epimerase/dehydratase family FYA08_RS08325 PF00293 NUDIX domain FYA08_RS08330 PF13579 Glycosyl transferase 4-like domain FYA08_RS08330 PF00534 Glycosyl transferases group 1 FYA08_RS08335 PF01050 Mannose-6-phosphate isomerase FYA08_RS08335 PF00483 Nucleotidyl transferase FYA08_RS08340 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FYA08_RS08340 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FYA08_RS08340 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FYA08_RS08340 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FYA08_RS08345 PF02397 Bacterial sugar transferase FYA08_RS08355 PF04230 Polysaccharide pyruvyl transferase FYA08_RS08360 PF13439 Glycosyltransferase Family 4 FYA08_RS08360 PF00534 Glycosyl transferases group 1 FYA08_RS08370 PF00483 Nucleotidyl transferase FYA08_RS08375 PF16363 GDP-mannose 4,6 dehydratase FYA08_RS08385 PF00483 Nucleotidyl transferase FYA08_RS08390 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FYA08_RS08395 PF01943 Polysaccharide biosynthesis protein FYA08_RS08400 PF03275 UDP-galactopyranose mutase FYA08_RS08415 PF00132 Bacterial transferase hexapeptide (six repeats) FYA08_RS08420 PF00534 Glycosyl transferases group 1 FYA08_RS08430 PF05598 Transposase domain (DUF772) FYA08_RS08430 PF01609 Transposase DDE domain FYA08_RS08440 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FYA08_RS08440 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FYA08_RS08445 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FYA08_RS08445 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FYA08_RS08445 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FYA08_RS08450 PF02706 Chain length determinant protein FYA08_RS08455 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FYA08_RS08455 PF01502 Phosphoribosyl-AMP cyclohydrolase FYA08_RS08460 PF00977 Histidine biosynthesis protein FYA08_RS08465 PF00977 Histidine biosynthesis protein FYA08_RS08470 PF00117 Glutamine amidotransferase class-I FYA08_RS08475 PF08645 Polynucleotide kinase 3 phosphatase FYA08_RS08475 PF00475 Imidazoleglycerol-phosphate dehydratase FYA08_RS08480 PF00155 Aminotransferase class I and II FYA08_RS08485 PF00815 Histidinol dehydrogenase FYA08_RS08490 PF01634 ATP phosphoribosyltransferase FYA08_RS08490 PF08029 HisG, C-terminal domain FYA08_RS08500 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system FYA08_RS08505 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system FYA08_RS08510 PF01370 NAD dependent epimerase/dehydratase family FYA08_RS08515 PF03466 LysR substrate binding domain FYA08_RS08515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS08525 PF13520 Amino acid permease FYA08_RS08530 PF04143 Sulphur transport FYA08_RS08535 PF01206 Sulfurtransferase TusA FYA08_RS08540 PF08411 Exonuclease C-terminal FYA08_RS08540 PF00929 Exonuclease FYA08_RS08545 PF00768 D-alanyl-D-alanine carboxypeptidase FYA08_RS08545 PF07943 Penicillin-binding protein 5, C-terminal domain FYA08_RS08550 PF06445 GyrI-like small molecule binding domain FYA08_RS08555 PF04632 Fusaric acid resistance protein family FYA08_RS08560 PF04363 Protein of unknown function (DUF496) FYA08_RS08565 PF10662 Ethanolamine utilisation - propanediol utilisation FYA08_RS08585 PF06755 CbtA_toxin of type IV toxin-antitoxin system FYA08_RS08590 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A FYA08_RS08595 PF06174 Protein of unknown function (DUF987) FYA08_RS08600 PF04002 RadC-like JAB domain FYA08_RS08610 PF13018 Extended Signal Peptide of Type V secretion system FYA08_RS08610 PF03797 Autotransporter beta-domain FYA08_RS08610 PF16168 Adhesin of bacterial autotransporter system, probable stalk FYA08_RS08645 PF01609 Transposase DDE domain FYA08_RS08645 PF05598 Transposase domain (DUF772) FYA08_RS08655 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FYA08_RS08660 PF02654 Cobalamin-5-phosphate synthase FYA08_RS08665 PF02277 Phosphoribosyltransferase FYA08_RS08670 PF17969 L,D-transpeptidase C-terminal domain FYA08_RS08670 PF03734 L,D-transpeptidase catalytic domain FYA08_RS08680 PF03466 LysR substrate binding domain FYA08_RS08680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS08685 PF03466 LysR substrate binding domain FYA08_RS08685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS08695 PF01554 MatE FYA08_RS08705 PF01709 Transcriptional regulator FYA08_RS08710 PF01048 Phosphorylase superfamily FYA08_RS08710 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus FYA08_RS08715 PF07690 Major Facilitator Superfamily FYA08_RS08715 PF00083 Sugar (and other) transporter FYA08_RS08725 PF11924 Inverse autotransporter, beta-domain FYA08_RS08725 PF09134 Invasin, domain 3 FYA08_RS08725 PF02369 Bacterial Ig-like domain (group 1) FYA08_RS08735 PF06167 Glucose-regulated metallo-peptidase M90 FYA08_RS08745 PF01292 Prokaryotic cytochrome b561 FYA08_RS08750 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FYA08_RS08755 PF01794 Ferric reductase like transmembrane component FYA08_RS08760 PF00174 Oxidoreductase molybdopterin binding domain FYA08_RS08765 PF00576 HIUase/Transthyretin family FYA08_RS08770 PF00072 Response regulator receiver domain FYA08_RS08770 PF00486 Transcriptional regulatory protein, C terminal FYA08_RS08775 PF00512 His Kinase A (phospho-acceptor) domain FYA08_RS08775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS08800 PF01966 HD domain FYA08_RS08805 PF00145 C-5 cytosine-specific DNA methylase FYA08_RS08805 PF18284 DNA methylase N-terminal domain FYA08_RS08810 PF03852 DNA mismatch endonuclease Vsr FYA08_RS08815 PF00892 EamA-like transporter family FYA08_RS08820 PF05661 Protein of unknown function (DUF808) FYA08_RS08825 PF09926 Uncharacterized small protein (DUF2158) FYA08_RS08830 PF00990 Diguanylate cyclase, GGDEF domain FYA08_RS08830 PF17151 Periplasmic sensor domain FYA08_RS08840 PF10733 Protein of unknown function (DUF2525) FYA08_RS08850 PF10781 Dextransucrase DSRB FYA08_RS08855 PF00196 Bacterial regulatory proteins, luxR family FYA08_RS08860 PF01311 Bacterial export proteins, family 1 FYA08_RS08865 PF01313 Bacterial export proteins, family 3 FYA08_RS08870 PF00813 FliP family FYA08_RS08875 PF04347 Flagellar biosynthesis protein, FliO FYA08_RS08880 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FYA08_RS08880 PF16973 Flagellar motor switch protein FliN N-terminal FYA08_RS08885 PF02154 Flagellar motor switch protein FliM FYA08_RS08885 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FYA08_RS08890 PF03748 Flagellar basal body-associated protein FliL FYA08_RS08895 PF02120 Flagellar hook-length control protein FliK FYA08_RS08900 PF02050 Flagellar FliJ protein FYA08_RS08905 PF18269 T3SS EscN ATPase C-terminal domain FYA08_RS08905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FYA08_RS08910 PF02108 Flagellar assembly protein FliH FYA08_RS08915 PF01706 FliG C-terminal domain FYA08_RS08915 PF14841 FliG middle domain FYA08_RS08915 PF14842 FliG N-terminal domain FYA08_RS08920 PF01514 Secretory protein of YscJ/FliF family FYA08_RS08920 PF08345 Flagellar M-ring protein C-terminal FYA08_RS08925 PF02049 Flagellar hook-basal body complex protein FliE FYA08_RS08945 PF00583 Acetyltransferase (GNAT) family FYA08_RS08950 PF02586 SOS response associated peptidase (SRAP) FYA08_RS08955 PF01206 Sulfurtransferase TusA FYA08_RS08960 PF04143 Sulphur transport FYA08_RS08965 PF13987 YedD-like protein FYA08_RS08970 PF02806 Alpha amylase, C-terminal all-beta domain FYA08_RS08970 PF00128 Alpha amylase, catalytic domain FYA08_RS08975 PF05400 Flagellar protein FliT FYA08_RS08980 PF02561 Flagellar protein FliS FYA08_RS08985 PF02465 Flagellar hook-associated protein 2 N-terminus FYA08_RS08985 PF07195 Flagellar hook-associated protein 2 C-terminus FYA08_RS08990 PF00700 Bacterial flagellin C-terminal helical region FYA08_RS08990 PF08884 Flagellin D3 domain FYA08_RS08990 PF00669 Bacterial flagellin N-terminal helical region FYA08_RS08995 PF04542 Sigma-70 region 2 FYA08_RS08995 PF04545 Sigma-70, region 4 FYA08_RS08995 PF04539 Sigma-70 region 3 FYA08_RS09000 PF02899 Phage integrase, N-terminal SAM-like domain FYA08_RS09005 PF00497 Bacterial extracellular solute-binding proteins, family 3 FYA08_RS09010 PF00291 Pyridoxal-phosphate dependent enzyme FYA08_RS09015 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS09020 PF00005 ABC transporter FYA08_RS09025 PF03472 Autoinducer binding domain FYA08_RS09025 PF00196 Bacterial regulatory proteins, luxR family FYA08_RS09030 PF10769 Protein of unknown function (DUF2594) FYA08_RS09040 PF00196 Bacterial regulatory proteins, luxR family FYA08_RS09040 PF00072 Response regulator receiver domain FYA08_RS09045 PF08459 UvrC Helix-hairpin-helix N-terminal FYA08_RS09045 PF02151 UvrB/uvrC motif FYA08_RS09045 PF01541 GIY-YIG catalytic domain FYA08_RS09050 PF01066 CDP-alcohol phosphatidyltransferase FYA08_RS09070 PF03695 Uncharacterised protein family (UPF0149) FYA08_RS09070 PF02810 SEC-C motif FYA08_RS09075 PF03222 Tryptophan/tyrosine permease family FYA08_RS09080 PF10678 Protein of unknown function (DUF2492) FYA08_RS09085 PF00210 Ferritin-like domain FYA08_RS09090 PF13992 YecR-like lipoprotein FYA08_RS09100 PF10964 Protein of unknown function (DUF2766) FYA08_RS09105 PF00210 Ferritin-like domain FYA08_RS09110 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FYA08_RS09115 PF00005 ABC transporter FYA08_RS09120 PF02653 Branched-chain amino acid transport system / permease component FYA08_RS09125 PF02358 Trehalose-phosphatase FYA08_RS09130 PF00982 Glycosyltransferase family 20 FYA08_RS09135 PF00582 Universal stress protein family FYA08_RS09140 PF01609 Transposase DDE domain FYA08_RS09140 PF05598 Transposase domain (DUF772) FYA08_RS09145 PF05247 Flagellar transcriptional activator (FlhD) FYA08_RS09150 PF05280 Flagellar transcriptional activator (FlhC) FYA08_RS09155 PF01618 MotA/TolQ/ExbB proton channel family FYA08_RS09160 PF13677 Membrane MotB of proton-channel complex MotA/MotB FYA08_RS09160 PF00691 OmpA family FYA08_RS09170 PF01584 CheW-like domain FYA08_RS09175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FYA08_RS09175 PF00672 HAMP domain FYA08_RS09175 PF02203 Tar ligand binding domain homologue FYA08_RS09180 PF00672 HAMP domain FYA08_RS09180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FYA08_RS09180 PF02203 Tar ligand binding domain homologue FYA08_RS09185 PF01739 CheR methyltransferase, SAM binding domain FYA08_RS09185 PF03705 CheR methyltransferase, all-alpha domain FYA08_RS09190 PF01339 CheB methylesterase FYA08_RS09190 PF00072 Response regulator receiver domain FYA08_RS09195 PF00072 Response regulator receiver domain FYA08_RS09200 PF04344 Chemotaxis phosphatase, CheZ FYA08_RS09205 PF01312 FlhB HrpN YscU SpaS Family FYA08_RS09210 PF00771 FHIPEP family FYA08_RS09215 PF06366 Flagellar protein FlhE FYA08_RS09220 PF07007 Lysozyme inhibitor LprI FYA08_RS09225 PF03485 Arginyl tRNA synthetase N terminal domain FYA08_RS09225 PF05746 DALR anticodon binding domain FYA08_RS09225 PF00750 tRNA synthetases class I (R) FYA08_RS09230 PF06185 YecM protein FYA08_RS09235 PF03932 CutC family FYA08_RS09240 PF03264 NapC/NirT cytochrome c family, N-terminal region FYA08_RS09245 PF00384 Molybdopterin oxidoreductase FYA08_RS09245 PF18364 Molybdopterin oxidoreductase N-terminal domain FYA08_RS09245 PF01568 Molydopterin dinucleotide binding domain FYA08_RS09250 PF08003 Protein of unknown function (DUF1698) FYA08_RS09255 PF13649 Methyltransferase domain FYA08_RS09260 PF01124 MAPEG family FYA08_RS09265 PF01904 Protein of unknown function DUF72 FYA08_RS09270 PF00857 Isochorismatase family FYA08_RS09275 PF02938 GAD domain FYA08_RS09275 PF01336 OB-fold nucleic acid binding domain FYA08_RS09275 PF00152 tRNA synthetases class II (D, K and N) FYA08_RS09280 PF00293 NUDIX domain FYA08_RS09285 PF01709 Transcriptional regulator FYA08_RS09290 PF02075 Crossover junction endodeoxyribonuclease RuvC FYA08_RS09295 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family FYA08_RS09305 PF01330 RuvA N terminal domain FYA08_RS09305 PF07499 RuvA, C-terminal domain FYA08_RS09310 PF05491 RuvB C-terminal winged helix domain FYA08_RS09310 PF05496 Holliday junction DNA helicase RuvB P-loop domain FYA08_RS09310 PF17864 RuvB AAA lid domain FYA08_RS09315 PF00950 ABC 3 transport family FYA08_RS09320 PF00005 ABC transporter FYA08_RS09325 PF01297 Zinc-uptake complex component A periplasmic FYA08_RS09330 PF08525 Opacity-associated protein A N-terminal motif FYA08_RS09330 PF01551 Peptidase family M23 FYA08_RS09330 PF01476 LysM domain FYA08_RS09335 PF03279 Bacterial lipid A biosynthesis acyltransferase FYA08_RS09340 PF00224 Pyruvate kinase, barrel domain FYA08_RS09340 PF02887 Pyruvate kinase, alpha/beta domain FYA08_RS09345 PF01380 SIS domain FYA08_RS09345 PF01418 Helix-turn-helix domain, rpiR family FYA08_RS09350 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FYA08_RS09350 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FYA08_RS09355 PF00920 Dehydratase family FYA08_RS09360 PF01081 KDPG and KHG aldolase FYA08_RS09365 PF02222 ATP-grasp domain FYA08_RS09370 PF07130 YebG protein FYA08_RS09375 PF13995 YebF-like protein FYA08_RS09380 PF04391 Protein of unknown function (DUF533) FYA08_RS09385 PF00326 Prolyl oligopeptidase family FYA08_RS09385 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FYA08_RS09390 PF00929 Exonuclease FYA08_RS09395 PF00795 Carbon-nitrogen hydrolase FYA08_RS09400 PF06440 DNA polymerase III, theta subunit FYA08_RS09405 PF04234 CopC domain FYA08_RS09410 PF05425 Copper resistance protein D FYA08_RS09415 PF10709 Protein of unknown function (DUF2511) FYA08_RS09420 PF00149 Calcineurin-like phosphoesterase FYA08_RS09425 PF07358 Protein of unknown function (DUF1482) FYA08_RS09430 PF07351 Protein of unknown function (DUF1480) FYA08_RS09435 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF FYA08_RS09435 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF FYA08_RS09435 PF01189 16S rRNA methyltransferase RsmB/F FYA08_RS09440 PF02470 MlaD protein FYA08_RS09445 PF04403 Paraquat-inducible protein A FYA08_RS09450 PF13185 GAF domain FYA08_RS09455 PF17516 ProQ C-terminal domain FYA08_RS09455 PF04352 ProQ/FINO family FYA08_RS09460 PF00595 PDZ domain FYA08_RS09460 PF17804 Tail specific protease N-terminal domain FYA08_RS09460 PF11818 C-terminal domain of tail specific protease (DUF3340) FYA08_RS09460 PF03572 Peptidase family S41 FYA08_RS09465 PF01435 Peptidase family M48 FYA08_RS09470 PF07690 Major Facilitator Superfamily FYA08_RS09475 PF09339 IclR helix-turn-helix domain FYA08_RS09475 PF01614 Bacterial transcriptional regulator FYA08_RS09480 PF13996 YobH-like protein FYA08_RS09485 PF13998 MgrB protein FYA08_RS09490 PF13974 YebO-like protein FYA08_RS09495 PF10736 Protein of unknown function (DUF2627) FYA08_RS09500 PF00313 'Cold-shock' DNA-binding domain FYA08_RS09505 PF13847 Methyltransferase domain FYA08_RS09510 PF02659 Putative manganese efflux pump FYA08_RS09515 PF06173 Protein of unknown function (DUF986) FYA08_RS09520 PF03613 PTS system mannose/fructose/sorbose family IID component FYA08_RS09525 PF03609 PTS system sorbose-specific iic component FYA08_RS09530 PF03830 PTS system sorbose subfamily IIB component FYA08_RS09530 PF03610 PTS system fructose IIA component FYA08_RS09535 PF03471 Transporter associated domain FYA08_RS09535 PF03741 Integral membrane protein TerC family FYA08_RS09540 PF12792 CSS motif domain associated with EAL FYA08_RS09540 PF00563 EAL domain FYA08_RS09545 PF03313 Serine dehydratase alpha chain FYA08_RS09545 PF03315 Serine dehydratase beta chain FYA08_RS09550 PF00293 NUDIX domain FYA08_RS09555 PF04715 Anthranilate synthase component I, N terminal region FYA08_RS09555 PF00425 chorismate binding enzyme FYA08_RS09560 PF03701 Uncharacterised protein family (UPF0181) FYA08_RS09565 PF08986 Domain of unknown function (DUF1889) FYA08_RS09570 PF01042 Endoribonuclease L-PSP FYA08_RS09575 PF04851 Type III restriction enzyme, res subunit FYA08_RS09575 PF13307 Helicase C-terminal domain FYA08_RS09580 PF00814 Glycoprotease family FYA08_RS09585 PF03843 Outer membrane lipoprotein Slp family FYA08_RS09590 PF00501 AMP-binding enzyme FYA08_RS09590 PF13193 AMP-binding enzyme C-terminal domain FYA08_RS09595 PF01612 3'-5' exonuclease FYA08_RS09595 PF00570 HRDC domain FYA08_RS09600 PF00175 Oxidoreductase NAD-binding domain FYA08_RS09600 PF00970 Oxidoreductase FAD-binding domain FYA08_RS09600 PF00111 2Fe-2S iron-sulfur cluster binding domain FYA08_RS09605 PF00355 Rieske [2Fe-2S] domain FYA08_RS09605 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FYA08_RS09610 PF02028 BCCT, betaine/carnitine/choline family transporter FYA08_RS09615 PF00180 Isocitrate/isopropylmalate dehydrogenase FYA08_RS09620 PF03466 LysR substrate binding domain FYA08_RS09620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS09625 PF01810 LysE type translocator FYA08_RS09630 PF09313 Domain of unknown function (DUF1971) FYA08_RS09635 PF01609 Transposase DDE domain FYA08_RS09645 PF08956 Domain of unknown function (DUF1869) FYA08_RS09650 PF04226 Transglycosylase associated protein FYA08_RS09665 PF00990 Diguanylate cyclase, GGDEF domain FYA08_RS09665 PF13185 GAF domain FYA08_RS09670 PF03891 Domain of unknown function (DUF333) FYA08_RS09675 PF04343 Protein of unknown function, DUF488 FYA08_RS09680 PF07690 Major Facilitator Superfamily FYA08_RS09685 PF12833 Helix-turn-helix domain FYA08_RS09685 PF02311 AraC-like ligand binding domain FYA08_RS09690 PF04284 Protein of unknown function (DUF441) FYA08_RS09700 PF04073 Aminoacyl-tRNA editing domain FYA08_RS09705 PF00990 Diguanylate cyclase, GGDEF domain FYA08_RS09705 PF17155 Gammaproteobacterial periplasmic sensor domain FYA08_RS09710 PF00990 Diguanylate cyclase, GGDEF domain FYA08_RS09710 PF17158 Membrane-associated sensor, integral membrane domain FYA08_RS09715 PF04285 Protein of unknown function (DUF444) FYA08_RS09720 PF06798 PrkA serine protein kinase C-terminal domain FYA08_RS09720 PF08298 PrkA AAA domain FYA08_RS09725 PF06629 MltA-interacting protein MipA FYA08_RS09730 PF00248 Aldo/keto reductase family FYA08_RS09735 PF01263 Aldose 1-epimerase FYA08_RS09740 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FYA08_RS09740 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FYA08_RS09745 PF01641 SelR domain FYA08_RS09750 PF07023 Protein of unknown function (DUF1315) FYA08_RS09755 PF00107 Zinc-binding dehydrogenase FYA08_RS09755 PF08240 Alcohol dehydrogenase GroES-like domain FYA08_RS09760 PF00083 Sugar (and other) transporter FYA08_RS09765 PF08240 Alcohol dehydrogenase GroES-like domain FYA08_RS09765 PF00107 Zinc-binding dehydrogenase FYA08_RS09770 PF01116 Fructose-bisphosphate aldolase class-II FYA08_RS09775 PF00294 pfkB family carbohydrate kinase FYA08_RS09780 PF00248 Aldo/keto reductase family FYA08_RS09785 PF08220 DeoR-like helix-turn-helix domain FYA08_RS09785 PF00455 DeoR C terminal sensor domain FYA08_RS09790 PF00083 Sugar (and other) transporter FYA08_RS09795 PF00857 Isochorismatase family FYA08_RS09800 PF17763 Glutaminase/Asparaginase C-terminal domain FYA08_RS09800 PF00710 Asparaginase, N-terminal FYA08_RS09805 PF01343 Peptidase family S49 FYA08_RS09810 PF00881 Nitroreductase family FYA08_RS09815 PF00586 AIR synthase related protein, N-terminal domain FYA08_RS09815 PF02769 AIR synthase related protein, C-terminal domain FYA08_RS09820 PF01131 DNA topoisomerase FYA08_RS09820 PF01751 Toprim domain FYA08_RS09825 PF06889 Protein of unknown function (DUF1266) FYA08_RS09830 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FYA08_RS09830 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FYA08_RS09835 PF07383 Protein of unknown function (DUF1496) FYA08_RS09840 PF00293 NUDIX domain FYA08_RS09845 PF01066 CDP-alcohol phosphatidyltransferase FYA08_RS09850 PF00581 Rhodanese-like domain FYA08_RS09855 PF00005 ABC transporter FYA08_RS09860 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS09865 PF13416 Bacterial extracellular solute-binding protein FYA08_RS09870 PF02627 Carboxymuconolactone decarboxylase family FYA08_RS09875 PF09335 SNARE associated Golgi protein FYA08_RS09885 PF09335 SNARE associated Golgi protein FYA08_RS09890 PF03372 Endonuclease/Exonuclease/phosphatase family FYA08_RS09895 PF00202 Aminotransferase class-III FYA08_RS09900 PF04958 Arginine N-succinyltransferase beta subunit FYA08_RS09905 PF00171 Aldehyde dehydrogenase family FYA08_RS09910 PF04996 Succinylarginine dihydrolase FYA08_RS09915 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FYA08_RS09920 PF07813 LTXXQ motif family protein FYA08_RS09925 PF05962 HutD FYA08_RS09935 PF02540 NAD synthase FYA08_RS09940 PF04355 SmpA / OmlA family FYA08_RS09945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FYA08_RS09950 PF02378 Phosphotransferase system, EIIC FYA08_RS09955 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FYA08_RS09960 PF07883 Cupin domain FYA08_RS09960 PF12833 Helix-turn-helix domain FYA08_RS09965 PF02056 Family 4 glycosyl hydrolase FYA08_RS09965 PF11975 Family 4 glycosyl hydrolase C-terminal domain FYA08_RS09970 PF04794 YdjC-like protein FYA08_RS09975 PF18011 C-terminal domain found in long catalases FYA08_RS09975 PF06628 Catalase-related immune-responsive FYA08_RS09975 PF00199 Catalase FYA08_RS09980 PF10729 Cell division activator CedA FYA08_RS09990 PF00375 Sodium:dicarboxylate symporter family FYA08_RS09995 PF04307 LexA-binding, inner membrane-associated putative hydrolase FYA08_RS10000 PF13419 Haloacid dehalogenase-like hydrolase FYA08_RS10005 PF14002 YniB-like protein FYA08_RS10010 PF03881 Fructosamine kinase FYA08_RS10015 PF11080 Endoribonuclease GhoS FYA08_RS10020 PF00294 pfkB family carbohydrate kinase FYA08_RS10025 PF04338 Protein of unknown function, DUF481 FYA08_RS10040 PF03129 Anticodon binding domain FYA08_RS10040 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FYA08_RS10040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FYA08_RS10040 PF02824 TGS domain FYA08_RS10045 PF05198 Translation initiation factor IF-3, N-terminal domain FYA08_RS10045 PF00707 Translation initiation factor IF-3, C-terminal domain FYA08_RS10050 PF01632 Ribosomal protein L35 FYA08_RS10055 PF00453 Ribosomal protein L20 FYA08_RS10065 PF01409 tRNA synthetases class II core domain (F) FYA08_RS10065 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FYA08_RS10070 PF03147 Ferredoxin-fold anticodon binding domain FYA08_RS10070 PF03484 tRNA synthetase B5 domain FYA08_RS10070 PF01588 Putative tRNA binding domain FYA08_RS10070 PF03483 B3/4 domain FYA08_RS10070 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FYA08_RS10075 PF00216 Bacterial DNA-binding protein FYA08_RS10080 PF01032 FecCD transport family FYA08_RS10085 PF00255 Glutathione peroxidase FYA08_RS10090 PF00005 ABC transporter FYA08_RS10095 PF00877 NlpC/P60 family FYA08_RS10100 PF00563 EAL domain FYA08_RS10105 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FYA08_RS10110 PF10636 Hemin uptake protein hemP FYA08_RS10115 PF00793 DAHP synthetase I family FYA08_RS10120 PF03618 Kinase/pyrophosphorylase FYA08_RS10125 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FYA08_RS10125 PF00391 PEP-utilising enzyme, mobile domain FYA08_RS10125 PF02896 PEP-utilising enzyme, TIM barrel domain FYA08_RS10130 PF00501 AMP-binding enzyme FYA08_RS10130 PF13193 AMP-binding enzyme C-terminal domain FYA08_RS10140 PF01494 FAD binding domain FYA08_RS10145 PF00766 Electron transfer flavoprotein FAD-binding domain FYA08_RS10145 PF01012 Electron transfer flavoprotein domain FYA08_RS10150 PF01012 Electron transfer flavoprotein domain FYA08_RS10155 PF02311 AraC-like ligand binding domain FYA08_RS10155 PF12833 Helix-turn-helix domain FYA08_RS10160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FYA08_RS10160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FYA08_RS10160 PF02770 Acyl-CoA dehydrogenase, middle domain FYA08_RS10165 PF01144 Coenzyme A transferase FYA08_RS10170 PF01487 Type I 3-dehydroquinase FYA08_RS10175 PF08501 Shikimate dehydrogenase substrate binding domain FYA08_RS10175 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FYA08_RS10180 PF07690 Major Facilitator Superfamily FYA08_RS10185 PF07690 Major Facilitator Superfamily FYA08_RS10190 PF08965 Domain of unknown function (DUF1870) FYA08_RS10200 PF01594 AI-2E family transporter FYA08_RS10205 PF02913 FAD linked oxidases, C-terminal domain FYA08_RS10205 PF01565 FAD binding domain FYA08_RS10205 PF13183 4Fe-4S dicluster domain FYA08_RS10210 PF03061 Thioesterase superfamily FYA08_RS10215 PF15930 Domain of unknown function FYA08_RS10220 PF01521 Iron-sulphur cluster biosynthesis FYA08_RS10225 PF01458 Uncharacterized protein family (UPF0051) FYA08_RS10230 PF00005 ABC transporter FYA08_RS10235 PF01458 Uncharacterized protein family (UPF0051) FYA08_RS10240 PF00266 Aminotransferase class-V FYA08_RS10245 PF02657 Fe-S metabolism associated domain FYA08_RS10250 PF17969 L,D-transpeptidase C-terminal domain FYA08_RS10250 PF01476 LysM domain FYA08_RS10250 PF03734 L,D-transpeptidase catalytic domain FYA08_RS10255 PF04728 Lipoprotein leucine-zipper FYA08_RS10260 PF00224 Pyruvate kinase, barrel domain FYA08_RS10260 PF02887 Pyruvate kinase, alpha/beta domain FYA08_RS10265 PF10965 Protein of unknown function (DUF2767) FYA08_RS10270 PF13247 4Fe-4S dicluster domain FYA08_RS10270 PF12800 4Fe-4S binding domain FYA08_RS10275 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain FYA08_RS10275 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 FYA08_RS10285 PF13247 4Fe-4S dicluster domain FYA08_RS10290 PF01292 Prokaryotic cytochrome b561 FYA08_RS10300 PF13454 FAD-NAD(P)-binding FYA08_RS10305 PF08803 Putative mono-oxygenase ydhR FYA08_RS10320 PF03212 Pertactin FYA08_RS10320 PF16168 Adhesin of bacterial autotransporter system, probable stalk FYA08_RS10325 PF01554 MatE FYA08_RS10330 PF00677 Lumazine binding domain FYA08_RS10340 PF07690 Major Facilitator Superfamily FYA08_RS10345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS10345 PF03466 LysR substrate binding domain FYA08_RS10350 PF00356 Bacterial regulatory proteins, lacI family FYA08_RS10360 PF07690 Major Facilitator Superfamily FYA08_RS10365 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FYA08_RS10365 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FYA08_RS10370 PF00877 NlpC/P60 family FYA08_RS10375 PF00462 Glutaredoxin FYA08_RS10380 PF00271 Helicase conserved C-terminal domain FYA08_RS10380 PF08494 DEAD/H associated FYA08_RS10380 PF00270 DEAD/DEAH box helicase FYA08_RS10385 PF00929 Exonuclease FYA08_RS10390 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FYA08_RS10395 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FYA08_RS10400 PF00440 Bacterial regulatory proteins, tetR family FYA08_RS10400 PF16925 Tetracyclin repressor-like, C-terminal domain FYA08_RS10405 PF06945 Protein of unknown function (DUF1289) FYA08_RS10410 PF00248 Aldo/keto reductase family FYA08_RS10415 PF00080 Copper/zinc superoxide dismutase (SODC) FYA08_RS10420 PF04632 Fusaric acid resistance protein family FYA08_RS10425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FYA08_RS10425 PF00529 HlyD membrane-fusion protein of T1SS FYA08_RS10430 PF07869 Protein of unknown function (DUF1656) FYA08_RS10435 PF01047 MarR family FYA08_RS10440 PF05433 Glycine zipper 2TM domain FYA08_RS10445 PF03702 Anhydro-N-acetylmuramic acid kinase FYA08_RS10450 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme FYA08_RS10455 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FYA08_RS10455 PF01243 Pyridoxamine 5'-phosphate oxidase FYA08_RS10460 PF01479 S4 domain FYA08_RS10460 PF00579 tRNA synthetases class I (W and Y) FYA08_RS10465 PF08543 Phosphomethylpyrimidine kinase FYA08_RS10470 PF00043 Glutathione S-transferase, C-terminal domain FYA08_RS10470 PF02798 Glutathione S-transferase, N-terminal domain FYA08_RS10475 PF00854 POT family FYA08_RS10480 PF10576 Iron-sulfur binding domain of endonuclease III FYA08_RS10480 PF00633 Helix-hairpin-helix motif FYA08_RS10480 PF00730 HhH-GPD superfamily base excision DNA repair protein FYA08_RS10485 PF02508 Rnf-Nqr subunit, membrane protein FYA08_RS10490 PF04205 FMN-binding domain FYA08_RS10495 PF03116 NQR2, RnfD, RnfE family FYA08_RS10500 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FYA08_RS10500 PF13375 RnfC Barrel sandwich hybrid domain FYA08_RS10500 PF10531 SLBB domain FYA08_RS10500 PF12838 4Fe-4S dicluster domain FYA08_RS10505 PF04060 Putative Fe-S cluster FYA08_RS10510 PF02508 Rnf-Nqr subunit, membrane protein FYA08_RS10515 PF10754 Protein of unknown function (DUF2569) FYA08_RS10520 PF05321 Haemolysin expression modulating protein FYA08_RS10530 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FYA08_RS10530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FYA08_RS10535 PF00962 Adenosine/AMP deaminase FYA08_RS10540 PF00155 Aminotransferase class I and II FYA08_RS10545 PF00367 phosphotransferase system, EIIB FYA08_RS10545 PF02378 Phosphotransferase system, EIIC FYA08_RS10550 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FYA08_RS10550 PF00356 Bacterial regulatory proteins, lacI family FYA08_RS10560 PF00440 Bacterial regulatory proteins, tetR family FYA08_RS10565 PF00703 Glycosyl hydrolases family 2 FYA08_RS10565 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FYA08_RS10565 PF02837 Glycosyl hydrolases family 2, sugar binding domain FYA08_RS10575 PF03573 outer membrane porin, OprD family FYA08_RS10580 PF06097 Bacterial protein of unknown function (DUF945) FYA08_RS10585 PF01238 Phosphomannose isomerase type I FYA08_RS10590 PF05683 Fumarase C-terminus FYA08_RS10590 PF05681 Fumarate hydratase (Fumerase) FYA08_RS10595 PF00206 Lyase FYA08_RS10595 PF10415 Fumarase C C-terminus FYA08_RS10600 PF05472 DNA replication terminus site-binding protein (Ter protein) FYA08_RS10605 PF00672 HAMP domain FYA08_RS10605 PF00512 His Kinase A (phospho-acceptor) domain FYA08_RS10605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS10610 PF00486 Transcriptional regulatory protein, C terminal FYA08_RS10610 PF00072 Response regulator receiver domain FYA08_RS10615 PF06942 GlpM protein FYA08_RS10625 PF13520 Amino acid permease FYA08_RS10630 PF07338 Protein of unknown function (DUF1471) FYA08_RS10635 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FYA08_RS10635 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FYA08_RS10635 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FYA08_RS10640 PF02233 NAD(P) transhydrogenase beta subunit FYA08_RS10645 PF01594 AI-2E family transporter FYA08_RS10655 PF00893 Small Multidrug Resistance protein FYA08_RS10660 PF00893 Small Multidrug Resistance protein FYA08_RS10665 PF00089 Trypsin FYA08_RS10680 PF07690 Major Facilitator Superfamily FYA08_RS10685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS10685 PF03466 LysR substrate binding domain FYA08_RS10690 PF00480 ROK family FYA08_RS10700 PF00654 Voltage gated chloride channel FYA08_RS10705 PF02613 Nitrate reductase delta subunit FYA08_RS10710 PF04976 DMSO reductase anchor subunit (DmsC) FYA08_RS10715 PF13247 4Fe-4S dicluster domain FYA08_RS10715 PF12800 4Fe-4S binding domain FYA08_RS10720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FYA08_RS10720 PF00384 Molybdopterin oxidoreductase FYA08_RS10720 PF01568 Molydopterin dinucleotide binding domain FYA08_RS10725 PF01568 Molydopterin dinucleotide binding domain FYA08_RS10725 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FYA08_RS10725 PF00384 Molybdopterin oxidoreductase FYA08_RS10730 PF06649 Protein of unknown function (DUF1161) FYA08_RS10735 PF06788 Uncharacterised protein family (UPF0257) FYA08_RS10740 PF13302 Acetyltransferase (GNAT) domain FYA08_RS10745 PF06932 Protein of unknown function (DUF1283) FYA08_RS10750 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FYA08_RS10755 PF13378 Enolase C-terminal domain-like FYA08_RS10755 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FYA08_RS10760 PF00107 Zinc-binding dehydrogenase FYA08_RS10760 PF08240 Alcohol dehydrogenase GroES-like domain FYA08_RS10785 PF07358 Protein of unknown function (DUF1482) FYA08_RS10790 PF05358 DicB protein FYA08_RS10805 PF07151 Protein of unknown function (DUF1391) FYA08_RS10810 PF01381 Helix-turn-helix FYA08_RS10830 PF14282 FlxA-like protein FYA08_RS10840 PF04221 RelB antitoxin FYA08_RS10845 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FYA08_RS10850 PF01848 Hok/gef family FYA08_RS10865 PF06147 Protein of unknown function (DUF968) FYA08_RS10870 PF03589 Antitermination protein FYA08_RS10880 PF00313 'Cold-shock' DNA-binding domain FYA08_RS10885 PF00313 'Cold-shock' DNA-binding domain FYA08_RS10890 PF04971 Bacteriophage P21 holin S FYA08_RS10895 PF07041 Protein of unknown function (DUF1327) FYA08_RS10900 PF00959 Phage lysozyme FYA08_RS10905 PF10721 Protein of unknown function (DUF2514) FYA08_RS10910 PF00313 'Cold-shock' DNA-binding domain FYA08_RS10930 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system FYA08_RS10935 PF07166 Protein of unknown function (DUF1398) FYA08_RS10940 PF13132 Domain of unknown function (DUF3950) FYA08_RS10945 PF07471 Phage DNA packaging protein Nu1 FYA08_RS10950 PF03335 Phage tail fibre repeat FYA08_RS10950 PF07484 Phage Tail Collar Domain FYA08_RS10955 PF02413 Caudovirales tail fibre assembly protein, lambda gpK FYA08_RS10960 PF02796 Helix-turn-helix domain of resolvase FYA08_RS10960 PF00239 Resolvase, N terminal domain FYA08_RS10975 PF00083 Sugar (and other) transporter FYA08_RS10975 PF07690 Major Facilitator Superfamily FYA08_RS10980 PF08125 Mannitol dehydrogenase C-terminal domain FYA08_RS10980 PF01232 Mannitol dehydrogenase Rossmann domain FYA08_RS10985 PF14001 YdfZ protein FYA08_RS10990 PF00392 Bacterial regulatory proteins, gntR family FYA08_RS10990 PF07729 FCD domain FYA08_RS10995 PF00106 short chain dehydrogenase FYA08_RS11000 PF01432 Peptidase family M3 FYA08_RS11005 PF02464 Competence-damaged protein FYA08_RS11010 PF04076 Bacterial OB fold (BOF) protein FYA08_RS11015 PF00990 Diguanylate cyclase, GGDEF domain FYA08_RS11025 PF07690 Major Facilitator Superfamily FYA08_RS11030 PF00892 EamA-like transporter family FYA08_RS11035 PF13999 MarB protein FYA08_RS11040 PF12833 Helix-turn-helix domain FYA08_RS11045 PF01047 MarR family FYA08_RS11050 PF01914 MarC family integral membrane protein FYA08_RS11055 PF07690 Major Facilitator Superfamily FYA08_RS11065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS11065 PF03466 LysR substrate binding domain FYA08_RS11070 PF00171 Aldehyde dehydrogenase family FYA08_RS11075 PF04960 Glutaminase FYA08_RS11080 PF13811 Domain of unknown function (DUF4186) FYA08_RS11085 PF00990 Diguanylate cyclase, GGDEF domain FYA08_RS11090 PF01232 Mannitol dehydrogenase Rossmann domain FYA08_RS11090 PF08125 Mannitol dehydrogenase C-terminal domain FYA08_RS11095 PF01062 Bestrophin, RFP-TM, chloride channel FYA08_RS11100 PF13649 Methyltransferase domain FYA08_RS11105 PF03992 Antibiotic biosynthesis monooxygenase FYA08_RS11110 PF01791 DeoC/LacD family aldolase FYA08_RS11115 PF13407 Periplasmic binding protein domain FYA08_RS11120 PF02653 Branched-chain amino acid transport system / permease component FYA08_RS11125 PF02653 Branched-chain amino acid transport system / permease component FYA08_RS11130 PF00005 ABC transporter FYA08_RS11135 PF04198 Putative sugar-binding domain FYA08_RS11140 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FYA08_RS11140 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FYA08_RS11160 PF01381 Helix-turn-helix FYA08_RS11165 PF07804 HipA-like C-terminal domain FYA08_RS11165 PF13657 HipA N-terminal domain FYA08_RS11180 PF00419 Fimbrial protein FYA08_RS11185 PF00419 Fimbrial protein FYA08_RS11190 PF09160 FimH, mannose binding FYA08_RS11195 PF00384 Molybdopterin oxidoreductase FYA08_RS11200 PF17073 Two-component-system connector protein FYA08_RS11205 PF12833 Helix-turn-helix domain FYA08_RS11210 PF00884 Sulfatase FYA08_RS11215 PF13186 Iron-sulfur cluster-binding domain FYA08_RS11215 PF04055 Radical SAM superfamily FYA08_RS11225 PF00005 ABC transporter FYA08_RS11225 PF06472 ABC transporter transmembrane region 2 FYA08_RS11230 PF07715 TonB-dependent Receptor Plug Domain FYA08_RS11235 PF05193 Peptidase M16 inactive domain FYA08_RS11235 PF00675 Insulinase (Peptidase family M16) FYA08_RS11240 PF00282 Pyridoxal-dependent decarboxylase conserved domain FYA08_RS11245 PF13520 Amino acid permease FYA08_RS11250 PF02638 Glycosyl hydrolase-like 10 FYA08_RS11255 PF00990 Diguanylate cyclase, GGDEF domain FYA08_RS11260 PF00990 Diguanylate cyclase, GGDEF domain FYA08_RS11260 PF00563 EAL domain FYA08_RS11260 PF13426 PAS domain FYA08_RS11265 PF01427 D-ala-D-ala dipeptidase FYA08_RS11270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FYA08_RS11275 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS11280 PF12911 N-terminal TM domain of oligopeptide transport permease C FYA08_RS11280 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS11285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FYA08_RS11285 PF00005 ABC transporter FYA08_RS11290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FYA08_RS11290 PF00005 ABC transporter FYA08_RS11295 PF02566 OsmC-like protein FYA08_RS11300 PF10684 Putative biofilm-dependent modulation protein FYA08_RS11305 PF08136 30S ribosomal protein subunit S22 family FYA08_RS11310 PF03949 Malic enzyme, NAD binding domain FYA08_RS11310 PF00390 Malic enzyme, N-terminal domain FYA08_RS11315 PF00107 Zinc-binding dehydrogenase FYA08_RS11315 PF08240 Alcohol dehydrogenase GroES-like domain FYA08_RS11320 PF01381 Helix-turn-helix FYA08_RS11325 PF01292 Prokaryotic cytochrome b561 FYA08_RS11330 PF13247 4Fe-4S dicluster domain FYA08_RS11330 PF12800 4Fe-4S binding domain FYA08_RS11330 PF09163 Formate dehydrogenase N, transmembrane FYA08_RS11340 PF00892 EamA-like transporter family FYA08_RS11345 PF00267 Gram-negative porin FYA08_RS11355 PF07690 Major Facilitator Superfamily FYA08_RS11360 PF01568 Molydopterin dinucleotide binding domain FYA08_RS11360 PF14710 Respiratory nitrate reductase alpha N-terminal FYA08_RS11360 PF00384 Molybdopterin oxidoreductase FYA08_RS11365 PF14711 Respiratory nitrate reductase beta C-terminal FYA08_RS11365 PF13247 4Fe-4S dicluster domain FYA08_RS11370 PF02613 Nitrate reductase delta subunit FYA08_RS11375 PF02665 Nitrate reductase gamma subunit FYA08_RS11380 PF02567 Phenazine biosynthesis-like protein FYA08_RS11385 PF00797 N-acetyltransferase FYA08_RS11390 PF01613 Flavin reductase like domain FYA08_RS11395 PF01361 Tautomerase enzyme FYA08_RS11400 PF01609 Transposase DDE domain FYA08_RS11400 PF13808 DDE_Tnp_1-associated FYA08_RS11420 PF03527 RHS protein FYA08_RS11430 PF17520 Family of unknown function (DUF5445) FYA08_RS11435 PF13417 Glutathione S-transferase, N-terminal domain FYA08_RS11440 PF00324 Amino acid permease FYA08_RS11450 PF00593 TonB dependent receptor FYA08_RS11450 PF07715 TonB-dependent Receptor Plug Domain FYA08_RS11455 PF00392 Bacterial regulatory proteins, gntR family FYA08_RS11455 PF07729 FCD domain FYA08_RS11460 PF16884 N-terminal domain of oxidoreductase FYA08_RS11460 PF00107 Zinc-binding dehydrogenase FYA08_RS11465 PF00583 Acetyltransferase (GNAT) family FYA08_RS11470 PF04657 Putative inner membrane exporter, YdcZ FYA08_RS11475 PF10735 Protein of unknown function (DUF2526) FYA08_RS11480 PF10753 Toxin GhoT_OrtT FYA08_RS11490 PF00171 Aldehyde dehydrogenase family FYA08_RS11495 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS11500 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS11505 PF00005 ABC transporter FYA08_RS11505 PF08402 TOBE domain FYA08_RS11510 PF13416 Bacterial extracellular solute-binding protein FYA08_RS11515 PF00155 Aminotransferase class I and II FYA08_RS11515 PF00392 Bacterial regulatory proteins, gntR family FYA08_RS11520 PF01381 Helix-turn-helix FYA08_RS11520 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system FYA08_RS11525 PF07927 HicA toxin of bacterial toxin-antitoxin, FYA08_RS11530 PF10829 Protein of unknown function (DUF2554) FYA08_RS11535 PF12392 Collagenase FYA08_RS11535 PF01136 Peptidase family U32 FYA08_RS11540 PF01381 Helix-turn-helix FYA08_RS11540 PF07883 Cupin domain FYA08_RS11545 PF03594 Benzoate membrane transport protein FYA08_RS11550 PF01385 Probable transposase FYA08_RS11550 PF12323 Helix-turn-helix domain FYA08_RS11550 PF07282 Putative transposase DNA-binding domain FYA08_RS11560 PF11769 Protein of unknown function (DUF3313) FYA08_RS11565 PF03848 Tellurite resistance protein TehB FYA08_RS11570 PF03595 Voltage-dependent anion channel FYA08_RS11575 PF18836 Beta solenoid repeat from YDCK FYA08_RS11580 PF13302 Acetyltransferase (GNAT) domain FYA08_RS11585 PF04325 Protein of unknown function (DUF465) FYA08_RS11590 PF04349 Periplasmic glucan biosynthesis protein, MdoG FYA08_RS11595 PF07063 Domain of unknown function (DUF1338) FYA08_RS11600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS11600 PF03466 LysR substrate binding domain FYA08_RS11605 PF00672 HAMP domain FYA08_RS11605 PF02203 Tar ligand binding domain homologue FYA08_RS11605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FYA08_RS11610 PF01848 Hok/gef family FYA08_RS11620 PF01292 Prokaryotic cytochrome b561 FYA08_RS11630 PF00171 Aldehyde dehydrogenase family FYA08_RS11635 PF02698 DUF218 domain FYA08_RS11640 PF00270 DEAD/DEAH box helicase FYA08_RS11640 PF11898 Domain of unknown function (DUF3418) FYA08_RS11640 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FYA08_RS11640 PF00271 Helicase conserved C-terminal domain FYA08_RS11640 PF04408 Helicase associated domain (HA2) FYA08_RS11645 PF02525 Flavodoxin-like fold FYA08_RS11650 PF00782 Dual specificity phosphatase, catalytic domain FYA08_RS11655 PF12147 Putative methyltransferase FYA08_RS11655 PF12146 Serine aminopeptidase, S33 FYA08_RS11665 PF01066 CDP-alcohol phosphatidyltransferase FYA08_RS11670 PF10971 Protein of unknown function (DUF2773) FYA08_RS11675 PF00248 Aldo/keto reductase family FYA08_RS11690 PF00665 Integrase core domain FYA08_RS11690 PF13936 Helix-turn-helix domain FYA08_RS11710 PF00132 Bacterial transferase hexapeptide (six repeats) FYA08_RS11715 PF07848 PaaX-like protein FYA08_RS11715 PF08223 PaaX-like protein C-terminal domain FYA08_RS11720 PF00501 AMP-binding enzyme FYA08_RS11720 PF14535 AMP-binding enzyme C-terminal domain FYA08_RS11725 PF00108 Thiolase, N-terminal domain FYA08_RS11725 PF02803 Thiolase, C-terminal domain FYA08_RS11730 PF03061 Thioesterase superfamily FYA08_RS11735 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FYA08_RS11735 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FYA08_RS11735 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain FYA08_RS11740 PF00378 Enoyl-CoA hydratase/isomerase FYA08_RS11745 PF00378 Enoyl-CoA hydratase/isomerase FYA08_RS11750 PF00970 Oxidoreductase FAD-binding domain FYA08_RS11750 PF00175 Oxidoreductase NAD-binding domain FYA08_RS11750 PF00111 2Fe-2S iron-sulfur cluster binding domain FYA08_RS11755 PF01883 Iron-sulfur cluster assembly protein FYA08_RS11760 PF05138 Phenylacetic acid catabolic protein FYA08_RS11765 PF06243 Phenylacetic acid degradation B FYA08_RS11770 PF05138 Phenylacetic acid catabolic protein FYA08_RS11775 PF00171 Aldehyde dehydrogenase family FYA08_RS11775 PF01575 MaoC like domain FYA08_RS11780 PF02728 Copper amine oxidase, N3 domain FYA08_RS11780 PF02727 Copper amine oxidase, N2 domain FYA08_RS11780 PF07833 Copper amine oxidase N-terminal domain FYA08_RS11780 PF01179 Copper amine oxidase, enzyme domain FYA08_RS11785 PF00171 Aldehyde dehydrogenase family FYA08_RS11790 PF14525 AraC-binding-like domain FYA08_RS11790 PF12833 Helix-turn-helix domain FYA08_RS11795 PF07027 Protein of unknown function (DUF1318) FYA08_RS11800 PF13617 YnbE-like lipoprotein FYA08_RS11805 PF11739 Dicarboxylate transport FYA08_RS11810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FYA08_RS11810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FYA08_RS11815 PF03724 META domain FYA08_RS11820 PF03891 Domain of unknown function (DUF333) FYA08_RS11825 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FYA08_RS11825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FYA08_RS11825 PF10371 Domain of unknown function FYA08_RS11825 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FYA08_RS11825 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FYA08_RS11830 PF00267 Gram-negative porin FYA08_RS11835 PF00582 Universal stress protein family FYA08_RS11850 PF00239 Resolvase, N terminal domain FYA08_RS11850 PF02796 Helix-turn-helix domain of resolvase FYA08_RS11855 PF02413 Caudovirales tail fibre assembly protein, lambda gpK FYA08_RS11860 PF07484 Phage Tail Collar Domain FYA08_RS11860 PF08400 Prophage tail fibre N-terminal FYA08_RS11860 PF03335 Phage tail fibre repeat FYA08_RS11865 PF13505 Outer membrane protein beta-barrel domain FYA08_RS11870 PF05598 Transposase domain (DUF772) FYA08_RS11870 PF01609 Transposase DDE domain FYA08_RS11895 PF02195 ParB-like nuclease domain FYA08_RS11900 PF02386 Cation transport protein FYA08_RS11905 PF06085 Lipoprotein Rz1 precursor FYA08_RS11910 PF07789 Protein of unknown function (DUF1627) FYA08_RS11915 PF01695 IstB-like ATP binding protein FYA08_RS11920 PF07120 Protein of unknown function (DUF1376) FYA08_RS11925 PF06254 Putative bacterial toxin ydaT FYA08_RS11930 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT FYA08_RS11945 PF07151 Protein of unknown function (DUF1391) FYA08_RS11950 PF14163 Super-infection exclusion protein B FYA08_RS11960 PF04181 Rtr1/RPAP2 family FYA08_RS11970 PF06630 Enterobacterial exodeoxyribonuclease VIII FYA08_RS11970 PF12684 PDDEXK-like domain of unknown function (DUF3799) FYA08_RS11975 PF03837 RecT family FYA08_RS11985 PF06688 Protein of unknown function (DUF1187) FYA08_RS11990 PF06806 Putative excisionase (DUF1233) FYA08_RS11995 PF00589 Phage integrase family FYA08_RS11995 PF12167 Arm DNA-binding domain FYA08_RS12000 PF01171 PP-loop family FYA08_RS12005 PF00271 Helicase conserved C-terminal domain FYA08_RS12005 PF00270 DEAD/DEAH box helicase FYA08_RS12005 PF03880 DbpA RNA binding domain FYA08_RS12010 PF01544 CorA-like Mg2+ transporter protein FYA08_RS12015 PF00990 Diguanylate cyclase, GGDEF domain FYA08_RS12015 PF08448 PAS fold FYA08_RS12020 PF01713 Smr domain FYA08_RS12025 PF03466 LysR substrate binding domain FYA08_RS12025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS12030 PF01546 Peptidase family M20/M25/M40 FYA08_RS12030 PF07687 Peptidase dimerisation domain FYA08_RS12035 PF01546 Peptidase family M20/M25/M40 FYA08_RS12040 PF03806 AbgT putative transporter family FYA08_RS12045 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FYA08_RS12045 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FYA08_RS12050 PF00325 Bacterial regulatory proteins, crp family FYA08_RS12050 PF00027 Cyclic nucleotide-binding domain FYA08_RS12055 PF00582 Universal stress protein family FYA08_RS12060 PF10749 Protein of unknown function (DUF2534) FYA08_RS12065 PF01609 Transposase DDE domain FYA08_RS12065 PF05598 Transposase domain (DUF772) FYA08_RS12070 PF00924 Mechanosensitive ion channel FYA08_RS12075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FYA08_RS12080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS12080 PF03466 LysR substrate binding domain FYA08_RS12085 PF12146 Serine aminopeptidase, S33 FYA08_RS12100 PF00246 Zinc carboxypeptidase FYA08_RS12105 PF13378 Enolase C-terminal domain-like FYA08_RS12105 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FYA08_RS12110 PF08534 Redoxin FYA08_RS12115 PF00158 Sigma-54 interaction domain FYA08_RS12115 PF13188 PAS domain FYA08_RS12115 PF18024 Helix-turn-helix domain FYA08_RS12120 PF05128 Domain of unknown function (DUF697) FYA08_RS12125 PF04317 YcjX-like family, DUF463 FYA08_RS12130 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FYA08_RS12130 PF00356 Bacterial regulatory proteins, lacI family FYA08_RS12135 PF09381 Outer membrane protein G (OmpG) FYA08_RS12145 PF13419 Haloacid dehalogenase-like hydrolase FYA08_RS12150 PF03636 Glycosyl hydrolase family 65, N-terminal domain FYA08_RS12150 PF03633 Glycosyl hydrolase family 65, C-terminal domain FYA08_RS12150 PF03632 Glycosyl hydrolase family 65 central catalytic domain FYA08_RS12155 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FYA08_RS12155 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FYA08_RS12160 PF01261 Xylose isomerase-like TIM barrel FYA08_RS12165 PF00107 Zinc-binding dehydrogenase FYA08_RS12170 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS12175 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS12180 PF01547 Bacterial extracellular solute-binding protein FYA08_RS12185 PF00128 Alpha amylase, catalytic domain FYA08_RS12190 PF00581 Rhodanese-like domain FYA08_RS12195 PF09584 Phage shock protein PspD (Phageshock_PspD) FYA08_RS12200 PF04024 PspC domain FYA08_RS12205 PF06667 Phage shock protein B FYA08_RS12210 PF04012 PspA/IM30 family FYA08_RS12215 PF02954 Bacterial regulatory protein, Fis family FYA08_RS12215 PF00158 Sigma-54 interaction domain FYA08_RS12220 PF00202 Aminotransferase class-III FYA08_RS12225 PF01266 FAD dependent oxidoreductase FYA08_RS12230 PF00171 Aldehyde dehydrogenase family FYA08_RS12235 PF07883 Cupin domain FYA08_RS12235 PF01381 Helix-turn-helix FYA08_RS12240 PF07722 Peptidase C26 FYA08_RS12245 PF00120 Glutamine synthetase, catalytic domain FYA08_RS12255 PF00324 Amino acid permease FYA08_RS12260 PF10820 Protein of unknown function (DUF2543) FYA08_RS12265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FYA08_RS12270 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS12275 PF12911 N-terminal TM domain of oligopeptide transport permease C FYA08_RS12275 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS12280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FYA08_RS12280 PF00005 ABC transporter FYA08_RS12285 PF00005 ABC transporter FYA08_RS12290 PF04480 Protein of unknown function (DUF559) FYA08_RS12305 PF17876 Cold shock domain FYA08_RS12305 PF08206 Ribonuclease B OB domain FYA08_RS12305 PF00773 RNB domain FYA08_RS12305 PF00575 S1 RNA binding domain FYA08_RS12315 PF13426 PAS domain FYA08_RS12315 PF00990 Diguanylate cyclase, GGDEF domain FYA08_RS12315 PF00563 EAL domain FYA08_RS12325 PF08220 DeoR-like helix-turn-helix domain FYA08_RS12325 PF00455 DeoR C terminal sensor domain FYA08_RS12330 PF05433 Glycine zipper 2TM domain FYA08_RS12335 PF01253 Translation initiation factor SUI1 FYA08_RS12340 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FYA08_RS12345 PF18073 Rubredoxin metal binding domain FYA08_RS12350 PF06305 Lipopolysaccharide assembly protein A domain FYA08_RS12355 PF01569 PAP2 superfamily FYA08_RS12360 PF00925 GTP cyclohydrolase II FYA08_RS12365 PF00330 Aconitase family (aconitate hydratase) FYA08_RS12365 PF00694 Aconitase C-terminal domain FYA08_RS12385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS12385 PF03466 LysR substrate binding domain FYA08_RS12390 PF01131 DNA topoisomerase FYA08_RS12390 PF01396 Topoisomerase DNA binding C4 zinc finger FYA08_RS12390 PF08272 Topoisomerase I zinc-ribbon-like FYA08_RS12390 PF01751 Toprim domain FYA08_RS12395 PF10692 Protein of unknown function (DUF2498) FYA08_RS12400 PF08496 Peptidase family S49 N-terminal FYA08_RS12400 PF01343 Peptidase family S49 FYA08_RS12405 PF00106 short chain dehydrogenase FYA08_RS12410 PF12557 Cob(I)alamin adenosyltransferase N terminal FYA08_RS12410 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FYA08_RS12415 PF00849 RNA pseudouridylate synthase FYA08_RS12415 PF01479 S4 domain FYA08_RS12420 PF09972 Predicted membrane protein (DUF2207) FYA08_RS12425 PF01300 Telomere recombination FYA08_RS12430 PF02811 PHP domain FYA08_RS12435 PF08255 Trp-operon Leader Peptide FYA08_RS12440 PF04715 Anthranilate synthase component I, N terminal region FYA08_RS12440 PF00425 chorismate binding enzyme FYA08_RS12445 PF00117 Glutamine amidotransferase class-I FYA08_RS12445 PF00591 Glycosyl transferase family, a/b domain FYA08_RS12445 PF02885 Glycosyl transferase family, helical bundle domain FYA08_RS12450 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FYA08_RS12450 PF00218 Indole-3-glycerol phosphate synthase FYA08_RS12455 PF00291 Pyridoxal-phosphate dependent enzyme FYA08_RS12460 PF00290 Tryptophan synthase alpha chain FYA08_RS12465 PF10685 Stress-induced bacterial acidophilic repeat motif FYA08_RS12470 PF05974 Domain of unknown function (DUF892) FYA08_RS12475 PF05974 Domain of unknown function (DUF892) FYA08_RS12480 PF03922 OmpW family FYA08_RS12495 PF04279 Intracellular septation protein A FYA08_RS12500 PF03061 Thioesterase superfamily FYA08_RS12505 PF03544 Gram-negative bacterial TonB protein C-terminal FYA08_RS12510 PF03795 YCII-related domain FYA08_RS12515 PF07885 Ion channel FYA08_RS12515 PF02254 TrkA-N domain FYA08_RS12525 PF13396 Phospholipase_D-nuclease N-terminal FYA08_RS12525 PF13091 PLD-like domain FYA08_RS12530 PF04269 Protein of unknown function, DUF440 FYA08_RS12535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FYA08_RS12535 PF00005 ABC transporter FYA08_RS12540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FYA08_RS12540 PF00005 ABC transporter FYA08_RS12545 PF12911 N-terminal TM domain of oligopeptide transport permease C FYA08_RS12545 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS12550 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS12555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FYA08_RS12560 PF01914 MarC family integral membrane protein FYA08_RS12565 PF00465 Iron-containing alcohol dehydrogenase FYA08_RS12565 PF00171 Aldehyde dehydrogenase family FYA08_RS12575 PF00265 Thymidine kinase FYA08_RS12580 PF00816 H-NS histone family FYA08_RS12585 PF00483 Nucleotidyl transferase FYA08_RS12590 PF00072 Response regulator receiver domain FYA08_RS12595 PF01734 Patatin-like phospholipase FYA08_RS12600 PF02810 SEC-C motif FYA08_RS12605 PF00551 Formyl transferase FYA08_RS12605 PF01842 ACT domain FYA08_RS12640 PF02665 Nitrate reductase gamma subunit FYA08_RS12645 PF02613 Nitrate reductase delta subunit FYA08_RS12650 PF14711 Respiratory nitrate reductase beta C-terminal FYA08_RS12650 PF13247 4Fe-4S dicluster domain FYA08_RS12655 PF00384 Molybdopterin oxidoreductase FYA08_RS12655 PF01568 Molydopterin dinucleotide binding domain FYA08_RS12655 PF14710 Respiratory nitrate reductase alpha N-terminal FYA08_RS12660 PF07690 Major Facilitator Superfamily FYA08_RS12665 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FYA08_RS12665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS12665 PF07730 Histidine kinase FYA08_RS12665 PF00672 HAMP domain FYA08_RS12670 PF00072 Response regulator receiver domain FYA08_RS12670 PF00196 Bacterial regulatory proteins, luxR family FYA08_RS12675 PF11924 Inverse autotransporter, beta-domain FYA08_RS12680 PF02635 DsrE/DsrF-like family FYA08_RS12685 PF04752 ChaC-like protein FYA08_RS12690 PF06150 ChaB FYA08_RS12695 PF01699 Sodium/calcium exchanger protein FYA08_RS12705 PF13940 Toxin Ldr, type I toxin-antitoxin system FYA08_RS12715 PF13940 Toxin Ldr, type I toxin-antitoxin system FYA08_RS12725 PF13940 Toxin Ldr, type I toxin-antitoxin system FYA08_RS12730 PF00793 DAHP synthetase I family FYA08_RS12735 PF13369 Transglutaminase-like superfamily FYA08_RS12740 PF04247 Invasion gene expression up-regulator, SirB FYA08_RS12745 PF13847 Methyltransferase domain FYA08_RS12745 PF17827 PrmC N-terminal domain FYA08_RS12750 PF03462 PCRF domain FYA08_RS12750 PF00472 RF-1 domain FYA08_RS12755 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FYA08_RS12755 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FYA08_RS12755 PF01488 Shikimate / quinate 5-dehydrogenase FYA08_RS12760 PF03550 Outer membrane lipoprotein LolB FYA08_RS12765 PF08544 GHMP kinases C terminal FYA08_RS12765 PF00288 GHMP kinases N terminal domain FYA08_RS12770 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FYA08_RS12770 PF14572 Phosphoribosyl synthetase-associated domain FYA08_RS12775 PF00916 Sulfate permease family FYA08_RS12775 PF01740 STAS domain FYA08_RS12780 PF10762 Protein of unknown function (DUF2583) FYA08_RS12785 PF01195 Peptidyl-tRNA hydrolase FYA08_RS12790 PF06071 Protein of unknown function (DUF933) FYA08_RS12790 PF01926 50S ribosome-binding GTPase FYA08_RS12795 PF03797 Autotransporter beta-domain FYA08_RS12795 PF03212 Pertactin FYA08_RS12800 PF02954 Bacterial regulatory protein, Fis family FYA08_RS12800 PF00158 Sigma-54 interaction domain FYA08_RS12800 PF00989 PAS fold FYA08_RS12805 PF02733 Dak1 domain FYA08_RS12810 PF02734 DAK2 domain FYA08_RS12815 PF00391 PEP-utilising enzyme, mobile domain FYA08_RS12815 PF00381 PTS HPr component phosphorylation site FYA08_RS12815 PF03610 PTS system fructose IIA component FYA08_RS12815 PF05524 PEP-utilising enzyme, N-terminal FYA08_RS12820 PF01204 Trehalase FYA08_RS12830 PF04226 Transglycosylase associated protein FYA08_RS12835 PF07317 Flagellar regulator YcgR FYA08_RS12835 PF07238 PilZ domain FYA08_RS12840 PF01464 Transglycosylase SLT domain FYA08_RS12845 PF17676 LD-carboxypeptidase C-terminal domain FYA08_RS12845 PF02016 LD-carboxypeptidase N-terminal domain FYA08_RS12850 PF03471 Transporter associated domain FYA08_RS12850 PF00999 Sodium/hydrogen exchanger family FYA08_RS12850 PF02080 TrkA-C domain FYA08_RS12855 PF01168 Alanine racemase, N-terminal domain FYA08_RS12855 PF00842 Alanine racemase, C-terminal domain FYA08_RS12860 PF01266 FAD dependent oxidoreductase FYA08_RS12865 PF04293 SpoVR like protein FYA08_RS12870 PF07840 FadR C-terminal domain FYA08_RS12870 PF00392 Bacterial regulatory proteins, gntR family FYA08_RS12875 PF06450 Bacterial Na+/H+ antiporter B (NhaB) FYA08_RS12880 PF02600 Disulfide bond formation protein DsbB FYA08_RS12885 PF13438 Domain of unknown function (DUF4113) FYA08_RS12885 PF00817 impB/mucB/samB family FYA08_RS12885 PF11799 impB/mucB/samB family C-terminal domain FYA08_RS12885 PF11798 IMS family HHH motif FYA08_RS12890 PF00717 Peptidase S24-like FYA08_RS12895 PF06109 Haemolysin E (HlyE) FYA08_RS12900 PF03692 Putative zinc- or iron-chelating domain FYA08_RS12905 PF01557 Fumarylacetoacetate (FAA) hydrolase family FYA08_RS12910 PF05166 YcgL domain FYA08_RS12915 PF04151 Bacterial pre-peptidase C-terminal domain FYA08_RS12920 PF05666 Fels-1 Prophage Protein-like FYA08_RS12925 PF03775 Septum formation inhibitor MinC, C-terminal domain FYA08_RS12925 PF05209 Septum formation inhibitor MinC, N-terminal domain FYA08_RS12930 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FYA08_RS12935 PF03776 Septum formation topological specificity factor MinE FYA08_RS12960 PF13436 Glycine-zipper domain FYA08_RS12965 PF16456 YmgD protein FYA08_RS12980 PF12792 CSS motif domain associated with EAL FYA08_RS12980 PF00563 EAL domain FYA08_RS12990 PF10798 Biofilm development protein YmgB/AriR FYA08_RS13000 PF10798 Biofilm development protein YmgB/AriR FYA08_RS13005 PF00563 EAL domain FYA08_RS13005 PF04940 Sensors of blue-light using FAD FYA08_RS13010 PF13411 MerR HTH family regulatory protein FYA08_RS13015 PF07166 Protein of unknown function (DUF1398) FYA08_RS13030 PF00180 Isocitrate/isopropylmalate dehydrogenase FYA08_RS13035 PF01844 HNH endonuclease FYA08_RS13040 PF00239 Resolvase, N terminal domain FYA08_RS13040 PF02796 Helix-turn-helix domain of resolvase FYA08_RS13050 PF02413 Caudovirales tail fibre assembly protein, lambda gpK FYA08_RS13055 PF02413 Caudovirales tail fibre assembly protein, lambda gpK FYA08_RS13060 PF07484 Phage Tail Collar Domain FYA08_RS13065 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) FYA08_RS13070 PF04865 Baseplate J-like protein FYA08_RS13075 PF04860 Phage portal protein FYA08_RS13085 PF03354 Phage Terminase FYA08_RS13100 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT FYA08_RS13105 PF00717 Peptidase S24-like FYA08_RS13125 PF07825 Excisionase-like protein FYA08_RS13130 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain FYA08_RS13130 PF00589 Phage integrase family FYA08_RS13135 PF10463 Peptidase U49 FYA08_RS13145 PF08242 Methyltransferase domain FYA08_RS13150 PF00180 Isocitrate/isopropylmalate dehydrogenase FYA08_RS13155 PF00849 RNA pseudouridylate synthase FYA08_RS13160 PF00293 NUDIX domain FYA08_RS13170 PF04356 Protein of unknown function (DUF489) FYA08_RS13175 PF08328 Adenylosuccinate lyase C-terminal FYA08_RS13175 PF00206 Lyase FYA08_RS13180 PF00072 Response regulator receiver domain FYA08_RS13180 PF00486 Transcriptional regulatory protein, C terminal FYA08_RS13185 PF08918 PhoQ Sensor FYA08_RS13185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS13190 PF08007 Cupin superfamily protein FYA08_RS13195 PF01546 Peptidase family M20/M25/M40 FYA08_RS13195 PF07687 Peptidase dimerisation domain FYA08_RS13200 PF00005 ABC transporter FYA08_RS13200 PF08402 TOBE domain FYA08_RS13205 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS13210 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS13215 PF13416 Bacterial extracellular solute-binding protein FYA08_RS13220 PF12158 Protein of unknown function (DUF3592) FYA08_RS13225 PF04536 TPM domain FYA08_RS13230 PF02146 Sir2 family FYA08_RS13235 PF00480 ROK family FYA08_RS13240 PF02687 FtsX-like permease family FYA08_RS13240 PF12704 MacB-like periplasmic core domain FYA08_RS13245 PF00005 ABC transporter FYA08_RS13250 PF02687 FtsX-like permease family FYA08_RS13250 PF12704 MacB-like periplasmic core domain FYA08_RS13255 PF01757 Acyltransferase family FYA08_RS13260 PF03461 TRCF domain FYA08_RS13260 PF00271 Helicase conserved C-terminal domain FYA08_RS13260 PF00270 DEAD/DEAH box helicase FYA08_RS13260 PF02559 CarD-like/TRCF domain FYA08_RS13260 PF17757 UvrB interaction domain FYA08_RS13265 PF17969 L,D-transpeptidase C-terminal domain FYA08_RS13265 PF01476 LysM domain FYA08_RS13265 PF03734 L,D-transpeptidase catalytic domain FYA08_RS13270 PF07338 Protein of unknown function (DUF1471) FYA08_RS13275 PF00440 Bacterial regulatory proteins, tetR family FYA08_RS13280 PF05433 Glycine zipper 2TM domain FYA08_RS13285 PF07992 Pyridine nucleotide-disulphide oxidoreductase FYA08_RS13290 PF05728 Uncharacterised protein family (UPF0227) FYA08_RS13295 PF00933 Glycosyl hydrolase family 3 N terminal domain FYA08_RS13300 PF01636 Phosphotransferase enzyme family FYA08_RS13305 PF13036 Peptidoglycan-synthase activator LpoB FYA08_RS13310 PF07233 Protein of unknown function (DUF1425) FYA08_RS13315 PF01230 HIT domain FYA08_RS13320 PF07715 TonB-dependent Receptor Plug Domain FYA08_RS13320 PF00593 TonB dependent receptor FYA08_RS13325 PF02378 Phosphotransferase system, EIIC FYA08_RS13325 PF00367 phosphotransferase system, EIIB FYA08_RS13330 PF01026 TatD related DNase FYA08_RS13335 PF09115 DNA polymerase III, delta subunit, C terminal FYA08_RS13340 PF02223 Thymidylate kinase FYA08_RS13345 PF02618 YceG-like family FYA08_RS13350 PF01063 Amino-transferase class IV FYA08_RS13355 PF02801 Beta-ketoacyl synthase, C-terminal domain FYA08_RS13355 PF00109 Beta-ketoacyl synthase, N-terminal domain FYA08_RS13360 PF00550 Phosphopantetheine attachment site FYA08_RS13370 PF00698 Acyl transferase domain FYA08_RS13380 PF02504 Fatty acid synthesis protein FYA08_RS13385 PF01783 Ribosomal L32p protein family FYA08_RS13390 PF02620 Large ribosomal RNA subunit accumulation protein YceD FYA08_RS13395 PF02545 Maf-like protein FYA08_RS13400 PF00849 RNA pseudouridylate synthase FYA08_RS13400 PF01479 S4 domain FYA08_RS13405 PF12111 Polyribonucleotide phosphorylase C terminal FYA08_RS13405 PF10150 Ribonuclease E/G family FYA08_RS13405 PF00575 S1 RNA binding domain FYA08_RS13410 PF00669 Bacterial flagellin N-terminal helical region FYA08_RS13415 PF00460 Flagella basal body rod protein FYA08_RS13415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FYA08_RS13420 PF10135 Rod binding protein FYA08_RS13420 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FYA08_RS13425 PF02119 Flagellar P-ring protein FYA08_RS13430 PF02107 Flagellar L-ring protein FYA08_RS13435 PF00460 Flagella basal body rod protein FYA08_RS13435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FYA08_RS13440 PF00460 Flagella basal body rod protein FYA08_RS13440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FYA08_RS13445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FYA08_RS13445 PF00460 Flagella basal body rod protein FYA08_RS13445 PF07559 Flagellar basal body protein FlaE FYA08_RS13450 PF13860 FlgD Ig-like domain FYA08_RS13450 PF13861 FlgD Tudor-like domain FYA08_RS13450 PF03963 Flagellar hook capping protein - N-terminal region FYA08_RS13455 PF00460 Flagella basal body rod protein FYA08_RS13455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FYA08_RS13460 PF00460 Flagella basal body rod protein FYA08_RS13465 PF13144 Chaperone for flagella basal body P-ring formation FYA08_RS13470 PF04316 Anti-sigma-28 factor, FlgM FYA08_RS13475 PF05130 FlgN protein FYA08_RS13480 PF03023 Lipid II flippase MurJ FYA08_RS13485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FYA08_RS13490 PF04337 Protein of unknown function, DUF480 FYA08_RS13495 PF13302 Acetyltransferase (GNAT) domain FYA08_RS13500 PF07690 Major Facilitator Superfamily FYA08_RS13505 PF13417 Glutathione S-transferase, N-terminal domain FYA08_RS13505 PF04399 Glutaredoxin 2, C terminal domain FYA08_RS13510 PF07273 Protein of unknown function (DUF1439) FYA08_RS13515 PF01979 Amidohydrolase family FYA08_RS13520 PF06183 DinI-like family FYA08_RS13525 PF13991 BssS protein family FYA08_RS13530 PF01266 FAD dependent oxidoreductase FYA08_RS13535 PF10968 Protein of unknown function (DUF2770) FYA08_RS13540 PF01292 Prokaryotic cytochrome b561 FYA08_RS13545 PF04264 YceI-like domain FYA08_RS13550 PF17773 UPF0176 acylphosphatase like domain FYA08_RS13550 PF12368 Rhodanase C-terminal FYA08_RS13550 PF00581 Rhodanese-like domain FYA08_RS13555 PF03279 Bacterial lipid A biosynthesis acyltransferase FYA08_RS13560 PF07690 Major Facilitator Superfamily FYA08_RS13565 PF13984 MsyB protein FYA08_RS13570 PF07119 Protein of unknown function (DUF1375) FYA08_RS13575 PF00535 Glycosyl transferase family 2 FYA08_RS13580 PF04349 Periplasmic glucan biosynthesis protein, MdoG FYA08_RS13585 PF01757 Acyltransferase family FYA08_RS13590 PF13091 PLD-like domain FYA08_RS13595 PF01661 Macro domain FYA08_RS13605 PF10610 Thin aggregative fimbriae synthesis protein FYA08_RS13610 PF07012 Curlin associated repeat FYA08_RS13615 PF07012 Curlin associated repeat FYA08_RS13620 PF00196 Bacterial regulatory proteins, luxR family FYA08_RS13625 PF10627 Curli assembly protein CsgE FYA08_RS13630 PF10614 Type VIII secretion system (T8SS), CsgF protein FYA08_RS13635 PF03783 Curli production assembly/transport component CsgG FYA08_RS13640 PF06496 Protein of unknown function (DUF1097) FYA08_RS13645 PF02613 Nitrate reductase delta subunit FYA08_RS13650 PF02811 PHP domain FYA08_RS13655 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FYA08_RS13700 PF00990 Diguanylate cyclase, GGDEF domain FYA08_RS13700 PF17158 Membrane-associated sensor, integral membrane domain FYA08_RS13710 PF01522 Polysaccharide deacetylase FYA08_RS13710 PF14883 Hypothetical glycosyl hydrolase family 13 FYA08_RS13715 PF00535 Glycosyl transferase family 2 FYA08_RS13720 PF13994 PgaD-like protein FYA08_RS13725 PF02562 PhoH-like protein FYA08_RS13730 PF04261 Dyp-type peroxidase family FYA08_RS13735 PF09375 Imelysin FYA08_RS13735 PF13473 Cupredoxin-like domain FYA08_RS13745 PF00474 Sodium:solute symporter family FYA08_RS13755 PF14850 DNA-binding domain of Proline dehydrogenase FYA08_RS13755 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FYA08_RS13755 PF00171 Aldehyde dehydrogenase family FYA08_RS13755 PF01619 Proline dehydrogenase FYA08_RS13760 PF00440 Bacterial regulatory proteins, tetR family FYA08_RS13760 PF08362 YcdC-like protein, C-terminal region FYA08_RS13770 PF00296 Luciferase-like monooxygenase FYA08_RS13775 PF00857 Isochorismatase family FYA08_RS13780 PF01042 Endoribonuclease L-PSP FYA08_RS13785 PF12697 Alpha/beta hydrolase family FYA08_RS13790 PF00881 Nitroreductase family FYA08_RS13795 PF01613 Flavin reductase like domain FYA08_RS13800 PF00860 Permease family FYA08_RS13805 PF10685 Stress-induced bacterial acidophilic repeat motif FYA08_RS13810 PF03358 NADPH-dependent FMN reductase FYA08_RS13815 PF13993 YccJ-like protein FYA08_RS13820 PF00328 Histidine phosphatase superfamily (branch 2) FYA08_RS13830 PF00226 DnaJ domain FYA08_RS13830 PF01556 DnaJ C terminal domain FYA08_RS13840 PF02613 Nitrate reductase delta subunit FYA08_RS13845 PF01568 Molydopterin dinucleotide binding domain FYA08_RS13845 PF18364 Molybdopterin oxidoreductase N-terminal domain FYA08_RS13845 PF00384 Molybdopterin oxidoreductase FYA08_RS13850 PF03264 NapC/NirT cytochrome c family, N-terminal region FYA08_RS13855 PF00072 Response regulator receiver domain FYA08_RS13855 PF00486 Transcriptional regulatory protein, C terminal FYA08_RS13860 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FYA08_RS13865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS13865 PF00672 HAMP domain FYA08_RS13865 PF00072 Response regulator receiver domain FYA08_RS13865 PF01627 Hpt domain FYA08_RS13865 PF00512 His Kinase A (phospho-acceptor) domain FYA08_RS13870 PF12801 4Fe-4S binding domain FYA08_RS13875 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system FYA08_RS13880 PF15939 Putative antitoxin of bacterial toxin-antitoxin system FYA08_RS13890 PF00313 'Cold-shock' DNA-binding domain FYA08_RS13895 PF00313 'Cold-shock' DNA-binding domain FYA08_RS13910 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF FYA08_RS13915 PF06251 Capsule biosynthesis GfcC FYA08_RS13920 PF06082 Exopolysaccharide biosynthesis protein YbjH FYA08_RS13925 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FYA08_RS13925 PF10531 SLBB domain FYA08_RS13925 PF02563 Polysaccharide biosynthesis/export protein FYA08_RS13930 PF01451 Low molecular weight phosphotyrosine protein phosphatase FYA08_RS13935 PF02706 Chain length determinant protein FYA08_RS13935 PF13807 G-rich domain on putative tyrosine kinase FYA08_RS13935 PF13614 AAA domain FYA08_RS13940 PF00328 Histidine phosphatase superfamily (branch 2) FYA08_RS13945 PF08173 Membrane bound YbgT-like protein FYA08_RS13950 PF02322 Cytochrome bd terminal oxidase subunit II FYA08_RS13955 PF01654 Cytochrome bd terminal oxidase subunit I FYA08_RS13960 PF04809 HupH hydrogenase expression protein, C-terminal conserved region FYA08_RS13965 PF07449 Hydrogenase-1 expression protein HyaE FYA08_RS13970 PF01750 Hydrogenase maturation protease FYA08_RS13975 PF01292 Prokaryotic cytochrome b561 FYA08_RS13980 PF00374 Nickel-dependent hydrogenase FYA08_RS13985 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FYA08_RS13985 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal FYA08_RS13995 PF01027 Inhibitor of apoptosis-promoting Bax1 FYA08_RS14000 PF04358 DsrC like protein FYA08_RS14005 PF00708 Acylphosphatase FYA08_RS14010 PF17785 PUA-like domain FYA08_RS14010 PF10672 S-adenosylmethionine-dependent methyltransferase FYA08_RS14015 PF08755 Hemimethylated DNA-binding protein YccV like FYA08_RS14020 PF13380 CoA binding domain FYA08_RS14025 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FYA08_RS14030 PF02142 MGS-like domain FYA08_RS14035 PF00580 UvrD/REP helicase N-terminal domain FYA08_RS14035 PF12462 DNA helicase IV / RNA helicase N terminal FYA08_RS14035 PF13361 UvrD-like helicase C-terminal domain FYA08_RS14040 PF03733 Inner membrane component domain FYA08_RS14045 PF12805 FUSC-like inner membrane protein yccS FYA08_RS14050 PF04993 TfoX N-terminal domain FYA08_RS14050 PF04994 TfoX C-terminal domain FYA08_RS14055 PF03846 Cell division inhibitor SulA FYA08_RS14060 PF00691 OmpA family FYA08_RS14060 PF01389 OmpA-like transmembrane domain FYA08_RS14065 PF17414 MatP C-terminal ribbon-helix-helix domain FYA08_RS14065 PF06303 MatP N-terminal domain FYA08_RS14070 PF05362 Lon protease (S16) C-terminal proteolytic domain FYA08_RS14070 PF13654 AAA domain FYA08_RS14075 PF07977 FabA-like domain FYA08_RS14080 PF04957 Ribosome modulation factor FYA08_RS14085 PF03886 ABC-type transport auxiliary lipoprotein component FYA08_RS14090 PF02470 MlaD protein FYA08_RS14095 PF04403 Paraquat-inducible protein A FYA08_RS14100 PF12848 ABC transporter FYA08_RS14100 PF00005 ABC transporter FYA08_RS14100 PF16326 ABC transporter C-terminal domain FYA08_RS14105 PF10672 S-adenosylmethionine-dependent methyltransferase FYA08_RS14105 PF02926 THUMP domain FYA08_RS14105 PF01170 Putative RNA methylase family UPF0020 FYA08_RS14110 PF03476 MOSC N-terminal beta barrel domain FYA08_RS14110 PF03473 MOSC domain FYA08_RS14110 PF00111 2Fe-2S iron-sulfur cluster binding domain FYA08_RS14115 PF07126 Cell-division protein ZapC FYA08_RS14120 PF01180 Dihydroorotate dehydrogenase FYA08_RS14125 PF02753 Pili assembly chaperone PapD, C-terminal domain FYA08_RS14125 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FYA08_RS14130 PF00419 Fimbrial protein FYA08_RS14135 PF00419 Fimbrial protein FYA08_RS14140 PF00419 Fimbrial protein FYA08_RS14145 PF13954 PapC N-terminal domain FYA08_RS14145 PF13953 PapC C-terminal domain FYA08_RS14145 PF00577 Outer membrane usher protein FYA08_RS14150 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FYA08_RS14150 PF02753 Pili assembly chaperone PapD, C-terminal domain FYA08_RS14155 PF00419 Fimbrial protein FYA08_RS14160 PF03358 NADPH-dependent FMN reductase FYA08_RS14165 PF09084 NMT1/THI5 like FYA08_RS14170 PF00296 Luciferase-like monooxygenase FYA08_RS14175 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS14180 PF00005 ABC transporter FYA08_RS14185 PF01433 Peptidase family M1 domain FYA08_RS14185 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FYA08_RS14185 PF11940 Domain of unknown function (DUF3458) Ig-like fold FYA08_RS14190 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FYA08_RS14190 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FYA08_RS14195 PF00152 tRNA synthetases class II (D, K and N) FYA08_RS14195 PF01336 OB-fold nucleic acid binding domain FYA08_RS14200 PF00267 Gram-negative porin FYA08_RS14205 PF00155 Aminotransferase class I and II FYA08_RS14210 PF00753 Metallo-beta-lactamase superfamily FYA08_RS14215 PF05951 Bacterial protein of unknown function (DUF882) FYA08_RS14220 PF03734 L,D-transpeptidase catalytic domain FYA08_RS14220 PF01471 Putative peptidoglycan binding domain FYA08_RS14225 PF04310 MukB N-terminal FYA08_RS14225 PF16330 MukB hinge domain FYA08_RS14230 PF04288 MukE-like family FYA08_RS14235 PF17193 MukF C-terminal domain FYA08_RS14235 PF03882 MukF winged-helix domain FYA08_RS14235 PF17192 MukF middle domain FYA08_RS14240 PF13847 Methyltransferase domain FYA08_RS14245 PF02698 DUF218 domain FYA08_RS14250 PF01636 Phosphotransferase enzyme family FYA08_RS14255 PF02348 Cytidylyltransferase FYA08_RS14260 PF03966 Trm112p-like protein FYA08_RS14265 PF06224 Winged helix DNA-binding domain FYA08_RS14270 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FYA08_RS14275 PF00005 ABC transporter FYA08_RS14275 PF00664 ABC transporter transmembrane region FYA08_RS14280 PF03772 Competence protein FYA08_RS14280 PF00753 Metallo-beta-lactamase superfamily FYA08_RS14285 PF00216 Bacterial DNA-binding protein FYA08_RS14290 PF00575 S1 RNA binding domain FYA08_RS14295 PF02224 Cytidylate kinase FYA08_RS14300 PF01435 Peptidase family M48 FYA08_RS14305 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FYA08_RS14310 PF00266 Aminotransferase class-V FYA08_RS14315 PF04239 Protein of unknown function (DUF421) FYA08_RS14320 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FYA08_RS14320 PF18381 YcaO cyclodehydratase C-terminal domain FYA08_RS14325 PF01226 Formate/nitrite transporter FYA08_RS14330 PF01228 Glycine radical FYA08_RS14330 PF02901 Pyruvate formate lyase-like FYA08_RS14335 PF04055 Radical SAM superfamily FYA08_RS14340 PF02525 Flavodoxin-like fold FYA08_RS14345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS14345 PF03466 LysR substrate binding domain FYA08_RS14350 PF13520 Amino acid permease FYA08_RS14355 PF07690 Major Facilitator Superfamily FYA08_RS14360 PF00857 Isochorismatase family FYA08_RS14365 PF04976 DMSO reductase anchor subunit (DmsC) FYA08_RS14370 PF12800 4Fe-4S binding domain FYA08_RS14370 PF13247 4Fe-4S dicluster domain FYA08_RS14375 PF00384 Molybdopterin oxidoreductase FYA08_RS14375 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FYA08_RS14375 PF01568 Molydopterin dinucleotide binding domain FYA08_RS14380 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FYA08_RS14380 PF02403 Seryl-tRNA synthetase N-terminal domain FYA08_RS14385 PF16193 AAA C-terminal domain FYA08_RS14385 PF12002 MgsA AAA+ ATPase C terminal FYA08_RS14385 PF00004 ATPase family associated with various cellular activities (AAA) FYA08_RS14390 PF03548 Outer membrane lipoprotein carrier protein LolA FYA08_RS14395 PF09397 Ftsk gamma domain FYA08_RS14395 PF17854 FtsK alpha domain FYA08_RS14395 PF01580 FtsK/SpoIIIE family FYA08_RS14395 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FYA08_RS14400 PF01037 Lrp/AsnC ligand binding domain FYA08_RS14405 PF07992 Pyridine nucleotide-disulphide oxidoreductase FYA08_RS14410 PF00005 ABC transporter FYA08_RS14410 PF00664 ABC transporter transmembrane region FYA08_RS14415 PF00005 ABC transporter FYA08_RS14415 PF00664 ABC transporter transmembrane region FYA08_RS14420 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FYA08_RS14425 PF01176 Translation initiation factor 1A / IF-1 FYA08_RS14440 PF10431 C-terminal, D2-small domain, of ClpB protein FYA08_RS14440 PF02861 Clp amino terminal domain, pathogenicity island component FYA08_RS14440 PF17871 AAA lid domain FYA08_RS14440 PF07724 AAA domain (Cdc48 subfamily) FYA08_RS14440 PF00004 ATPase family associated with various cellular activities (AAA) FYA08_RS14445 PF02617 ATP-dependent Clp protease adaptor protein ClpS FYA08_RS14450 PF00313 'Cold-shock' DNA-binding domain FYA08_RS14455 PF02687 FtsX-like permease family FYA08_RS14455 PF00005 ABC transporter FYA08_RS14455 PF12704 MacB-like periplasmic core domain FYA08_RS14460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FYA08_RS14465 PF04393 Protein of unknown function (DUF535) FYA08_RS14470 PF11398 Protein of unknown function (DUF2813) FYA08_RS14475 PF00230 Major intrinsic protein FYA08_RS14480 PF03956 Lysine exporter LysO FYA08_RS14485 PF03063 Prismane/CO dehydrogenase family FYA08_RS14490 PF00111 2Fe-2S iron-sulfur cluster binding domain FYA08_RS14490 PF00970 Oxidoreductase FAD-binding domain FYA08_RS14490 PF00175 Oxidoreductase NAD-binding domain FYA08_RS14495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FYA08_RS14495 PF00205 Thiamine pyrophosphate enzyme, central domain FYA08_RS14495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FYA08_RS14500 PF01212 Beta-eliminating lyase FYA08_RS14505 PF11066 Protein of unknown function (DUF2867) FYA08_RS14505 PF13460 NAD(P)H-binding FYA08_RS14510 PF01370 NAD dependent epimerase/dehydratase family FYA08_RS14515 PF01510 N-acetylmuramoyl-L-alanine amidase FYA08_RS14520 PF01906 Putative heavy-metal-binding FYA08_RS14525 PF12883 Protein of unknown function (DUF3828) FYA08_RS14530 PF00005 ABC transporter FYA08_RS14535 PF00497 Bacterial extracellular solute-binding proteins, family 3 FYA08_RS14540 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS14545 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS14550 PF00497 Bacterial extracellular solute-binding proteins, family 3 FYA08_RS14555 PF05958 tRNA (Uracil-5-)-methyltransferase FYA08_RS14560 PF10767 Protein of unknown function (DUF2593) FYA08_RS14565 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS14570 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS14575 PF08402 TOBE domain FYA08_RS14575 PF00005 ABC transporter FYA08_RS14580 PF13416 Bacterial extracellular solute-binding protein FYA08_RS14585 PF10722 Putative bacterial sensory transduction regulator FYA08_RS14590 PF18030 RimK PreATP-grasp domain FYA08_RS14590 PF08443 RimK-like ATP-grasp domain FYA08_RS14595 PF00881 Nitroreductase family FYA08_RS14600 PF07214 Protein of unknown function (DUF1418) FYA08_RS14605 PF00462 Glutaredoxin FYA08_RS14610 PF11045 Putative inner membrane protein of Enterobacteriaceae FYA08_RS14615 PF02080 TrkA-C domain FYA08_RS14615 PF06826 Predicted Permease Membrane Region FYA08_RS14620 PF00440 Bacterial regulatory proteins, tetR family FYA08_RS14625 PF07690 Major Facilitator Superfamily FYA08_RS14640 PF07690 Major Facilitator Superfamily FYA08_RS14645 PF01569 PAP2 superfamily FYA08_RS14650 PF00455 DeoR C terminal sensor domain FYA08_RS14650 PF08220 DeoR-like helix-turn-helix domain FYA08_RS14655 PF07943 Penicillin-binding protein 5, C-terminal domain FYA08_RS14655 PF00768 D-alanyl-D-alanine carboxypeptidase FYA08_RS14660 PF13417 Glutathione S-transferase, N-terminal domain FYA08_RS14660 PF00043 Glutathione S-transferase, C-terminal domain FYA08_RS14665 PF07995 Glucose / Sorbosone dehydrogenase FYA08_RS14670 PF10799 Biofilm formation protein (YliH/bssR) FYA08_RS14675 PF04055 Radical SAM superfamily FYA08_RS14675 PF18693 TRAM domain FYA08_RS14675 PF00919 Uncharacterized protein family UPF0004 FYA08_RS14680 PF00990 Diguanylate cyclase, GGDEF domain FYA08_RS14680 PF17156 Gammaproteobacterial periplasmic sensor domain FYA08_RS14685 PF17153 Periplasmic sensor domain, extracellular FYA08_RS14685 PF00563 EAL domain FYA08_RS14690 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS14690 PF12911 N-terminal TM domain of oligopeptide transport permease C FYA08_RS14695 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS14700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FYA08_RS14705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FYA08_RS14705 PF00005 ABC transporter FYA08_RS14710 PF01112 Asparaginase FYA08_RS14715 PF03453 MoeA N-terminal region (domain I and II) FYA08_RS14715 PF03454 MoeA C-terminal region (domain IV) FYA08_RS14715 PF00994 Probable molybdopterin binding domain FYA08_RS14720 PF00899 ThiF family FYA08_RS14725 PF00923 Transaldolase/Fructose-6-phosphate aldolase FYA08_RS14730 PF04055 Radical SAM superfamily FYA08_RS14735 PF01228 Glycine radical FYA08_RS14735 PF02901 Pyruvate formate lyase-like FYA08_RS14745 PF07350 Protein of unknown function (DUF1479) FYA08_RS14750 PF12848 ABC transporter FYA08_RS14750 PF00005 ABC transporter FYA08_RS14755 PF17969 L,D-transpeptidase C-terminal domain FYA08_RS14755 PF03734 L,D-transpeptidase catalytic domain FYA08_RS14760 PF03600 Citrate transporter FYA08_RS14765 PF02742 Iron dependent repressor, metal binding and dimerisation domain FYA08_RS14765 PF01325 Iron dependent repressor, N-terminal DNA binding domain FYA08_RS14775 PF00884 Sulfatase FYA08_RS14780 PF13505 Outer membrane protein beta-barrel domain FYA08_RS14790 PF00892 EamA-like transporter family FYA08_RS14795 PF00210 Ferritin-like domain FYA08_RS14800 PF00497 Bacterial extracellular solute-binding proteins, family 3 FYA08_RS14805 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS14810 PF00005 ABC transporter FYA08_RS14815 PF00924 Mechanosensitive ion channel FYA08_RS14820 PF05971 RNA methyltransferase FYA08_RS14825 PF07338 Protein of unknown function (DUF1471) FYA08_RS14830 PF00593 TonB dependent receptor FYA08_RS14830 PF07715 TonB-dependent Receptor Plug Domain FYA08_RS14835 PF13640 2OG-Fe(II) oxygenase superfamily FYA08_RS14835 PF18331 PKHD-type hydroxylase C-terminal domain FYA08_RS14840 PF01258 Prokaryotic dksA/traR C4-type zinc finger FYA08_RS14845 PF07338 Protein of unknown function (DUF1471) FYA08_RS14850 PF02615 Malate/L-lactate dehydrogenase FYA08_RS14855 PF02885 Glycosyl transferase family, helical bundle domain FYA08_RS14860 PF13307 Helicase C-terminal domain FYA08_RS14860 PF06733 DEAD_2 FYA08_RS14860 PF00270 DEAD/DEAH box helicase FYA08_RS14865 PF08719 Domain of unknown function (DUF1768) FYA08_RS14870 PF00270 DEAD/DEAH box helicase FYA08_RS14870 PF00271 Helicase conserved C-terminal domain FYA08_RS14875 PF09209 Tetracyclin repressor-like, C-terminal domain FYA08_RS14875 PF00440 Bacterial regulatory proteins, tetR family FYA08_RS14880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FYA08_RS14885 PF00005 ABC transporter FYA08_RS14900 PF11076 Putative inner membrane protein YbhQ FYA08_RS14905 PF03372 Endonuclease/Exonuclease/phosphatase family FYA08_RS14910 PF13091 PLD-like domain FYA08_RS14915 PF03706 Lysylphosphatidylglycerol synthase TM region FYA08_RS14920 PF01027 Inhibitor of apoptosis-promoting Bax1 FYA08_RS14925 PF01027 Inhibitor of apoptosis-promoting Bax1 FYA08_RS14930 PF02391 MoaE protein FYA08_RS14935 PF02597 ThiS family FYA08_RS14940 PF01967 MoaC family FYA08_RS14945 PF00994 Probable molybdopterin binding domain FYA08_RS14950 PF06463 Molybdenum Cofactor Synthesis C FYA08_RS14950 PF04055 Radical SAM superfamily FYA08_RS14955 PF01933 Uncharacterised protein family UPF0052 FYA08_RS14960 PF17757 UvrB interaction domain FYA08_RS14960 PF04851 Type III restriction enzyme, res subunit FYA08_RS14960 PF02151 UvrB/uvrC motif FYA08_RS14960 PF00271 Helicase conserved C-terminal domain FYA08_RS14960 PF12344 Ultra-violet resistance protein B FYA08_RS14970 PF08241 Methyltransferase domain FYA08_RS14975 PF00155 Aminotransferase class I and II FYA08_RS14980 PF04055 Radical SAM superfamily FYA08_RS14980 PF06968 Biotin and Thiamin Synthesis associated domain FYA08_RS14985 PF00202 Aminotransferase class-III FYA08_RS14990 PF01161 Phosphatidylethanolamine-binding protein FYA08_RS15010 PF02413 Caudovirales tail fibre assembly protein, lambda gpK FYA08_RS15015 PF08400 Prophage tail fibre N-terminal FYA08_RS15015 PF07484 Phage Tail Collar Domain FYA08_RS15015 PF03335 Phage tail fibre repeat FYA08_RS15050 PF06791 Prophage tail length tape measure protein FYA08_RS15090 PF03864 Phage major capsid protein E FYA08_RS15100 PF01957 NfeD-like C-terminal, partner-binding FYA08_RS15100 PF01972 Serine dehydrogenase proteinase FYA08_RS15110 PF02831 gpW FYA08_RS15115 PF02413 Caudovirales tail fibre assembly protein, lambda gpK FYA08_RS15120 PF07471 Phage DNA packaging protein Nu1 FYA08_RS15130 PF13132 Domain of unknown function (DUF3950) FYA08_RS15140 PF07166 Protein of unknown function (DUF1398) FYA08_RS15145 PF06291 Bor protein FYA08_RS15150 PF06085 Lipoprotein Rz1 precursor FYA08_RS15175 PF00149 Calcineurin-like phosphoesterase FYA08_RS15210 PF05772 NinB protein FYA08_RS15220 PF06992 Replication protein P FYA08_RS15240 PF00717 Peptidase S24-like FYA08_RS15240 PF01381 Helix-turn-helix FYA08_RS15270 PF10800 Protein of unknown function (DUF2528) FYA08_RS15345 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain FYA08_RS15345 PF00589 Phage integrase family FYA08_RS15350 PF01095 Pectinesterase FYA08_RS15355 PF00330 Aconitase family (aconitate hydratase) FYA08_RS15355 PF00694 Aconitase C-terminal domain FYA08_RS15360 PF00939 Sodium:sulfate symporter transmembrane region FYA08_RS15365 PF04303 PrpF protein FYA08_RS15370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS15370 PF03466 LysR substrate binding domain FYA08_RS15375 PF10282 Lactonase, 7-bladed beta-propeller FYA08_RS15385 PF03459 TOBE domain FYA08_RS15385 PF00005 ABC transporter FYA08_RS15390 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS15400 PF10766 Multidrug efflux pump-associated protein AcrZ FYA08_RS15405 PF03459 TOBE domain FYA08_RS15405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS15410 PF00005 ABC transporter FYA08_RS15415 PF16363 GDP-mannose 4,6 dehydratase FYA08_RS15420 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FYA08_RS15420 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FYA08_RS15425 PF10509 Galactokinase galactose-binding signature FYA08_RS15425 PF00288 GHMP kinases N terminal domain FYA08_RS15425 PF08544 GHMP kinases C terminal FYA08_RS15430 PF01263 Aldose 1-epimerase FYA08_RS15435 PF00300 Histidine phosphatase superfamily (branch 1) FYA08_RS15440 PF00793 DAHP synthetase I family FYA08_RS15445 PF13985 YbgS-like protein FYA08_RS15450 PF01545 Cation efflux family FYA08_RS15455 PF04973 Nicotinamide mononucleotide transporter FYA08_RS15460 PF02445 Quinolinate synthetase A protein FYA08_RS15505 PF16331 TolA binding protein trimerisation FYA08_RS15505 PF13174 Tetratricopeptide repeat FYA08_RS15510 PF00691 OmpA family FYA08_RS15515 PF04052 TolB amino-terminal domain FYA08_RS15515 PF07676 WD40-like Beta Propeller Repeat FYA08_RS15520 PF06519 TolA C-terminal FYA08_RS15525 PF02472 Biopolymer transport protein ExbD/TolR FYA08_RS15530 PF01618 MotA/TolQ/ExbB proton channel family FYA08_RS15535 PF03061 Thioesterase superfamily FYA08_RS15540 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) FYA08_RS15545 PF08173 Membrane bound YbgT-like protein FYA08_RS15550 PF02322 Cytochrome bd terminal oxidase subunit II FYA08_RS15555 PF01654 Cytochrome bd terminal oxidase subunit I FYA08_RS15565 PF01074 Glycosyl hydrolases family 38 N-terminal domain FYA08_RS15565 PF09261 Alpha mannosidase middle domain FYA08_RS15565 PF07748 Glycosyl hydrolases family 38 C-terminal domain FYA08_RS15570 PF02378 Phosphotransferase system, EIIC FYA08_RS15570 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FYA08_RS15570 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FYA08_RS15575 PF07702 UTRA domain FYA08_RS15575 PF00392 Bacterial regulatory proteins, gntR family FYA08_RS15580 PF02629 CoA binding domain FYA08_RS15580 PF00549 CoA-ligase FYA08_RS15585 PF08442 ATP-grasp domain FYA08_RS15585 PF00549 CoA-ligase FYA08_RS15590 PF00364 Biotin-requiring enzyme FYA08_RS15590 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FYA08_RS15590 PF02817 e3 binding domain FYA08_RS15595 PF16870 2-oxoglutarate dehydrogenase C-terminal FYA08_RS15595 PF00676 Dehydrogenase E1 component FYA08_RS15595 PF02779 Transketolase, pyrimidine binding domain FYA08_RS15595 PF16078 2-oxoglutarate dehydrogenase N-terminus FYA08_RS15600 PF13085 2Fe-2S iron-sulfur cluster binding domain FYA08_RS15605 PF00890 FAD binding domain FYA08_RS15605 PF02910 Fumarate reductase flavoprotein C-term FYA08_RS15610 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FYA08_RS15615 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FYA08_RS15625 PF00285 Citrate synthase, C-terminal domain FYA08_RS15630 PF00419 Fimbrial protein FYA08_RS15635 PF00577 Outer membrane usher protein FYA08_RS15635 PF13954 PapC N-terminal domain FYA08_RS15635 PF13953 PapC C-terminal domain FYA08_RS15640 PF02753 Pili assembly chaperone PapD, C-terminal domain FYA08_RS15640 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FYA08_RS15645 PF00419 Fimbrial protein FYA08_RS15650 PF05145 Transition state regulatory protein AbrB FYA08_RS15655 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FYA08_RS15655 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FYA08_RS15655 PF06827 Zinc finger found in FPG and IleRS FYA08_RS15660 PF03746 LamB/YcsF family FYA08_RS15665 PF02626 Carboxyltransferase domain, subdomain A and B FYA08_RS15670 PF02682 Carboxyltransferase domain, subdomain C and D FYA08_RS15675 PF01784 NIF3 (NGG1p interacting factor 3) FYA08_RS15680 PF00854 POT family FYA08_RS15685 PF00875 DNA photolyase FYA08_RS15685 PF03441 FAD binding domain of DNA photolyase FYA08_RS15690 PF08349 Protein of unknown function (DUF1722) FYA08_RS15725 PF05593 RHS Repeat FYA08_RS15725 PF03527 RHS protein FYA08_RS15730 PF10725 Protein of unknown function (DUF2517) FYA08_RS15735 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) FYA08_RS15740 PF03814 Potassium-transporting ATPase A subunit FYA08_RS15750 PF02669 K+-transporting ATPase, c chain FYA08_RS15755 PF13493 Domain of unknown function (DUF4118) FYA08_RS15755 PF13492 GAF domain FYA08_RS15755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS15755 PF00512 His Kinase A (phospho-acceptor) domain FYA08_RS15755 PF02702 Osmosensitive K+ channel His kinase sensor domain FYA08_RS15760 PF00072 Response regulator receiver domain FYA08_RS15760 PF00486 Transcriptional regulatory protein, C terminal FYA08_RS15770 PF01276 Orn/Lys/Arg decarboxylase, major domain FYA08_RS15770 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FYA08_RS15770 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FYA08_RS15775 PF13520 Amino acid permease FYA08_RS15795 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FYA08_RS15795 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FYA08_RS15795 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FYA08_RS15795 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FYA08_RS15800 PF03925 SeqA protein C-terminal domain FYA08_RS15800 PF17206 SeqA protein N-terminal domain FYA08_RS15805 PF12697 Alpha/beta hydrolase family FYA08_RS15810 PF01402 Ribbon-helix-helix protein, copG family FYA08_RS15815 PF00258 Flavodoxin FYA08_RS15825 PF01475 Ferric uptake regulator family FYA08_RS15830 PF13982 YbfN-like lipoprotein FYA08_RS15835 PF03573 outer membrane porin, OprD family FYA08_RS15840 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FYA08_RS15840 PF00749 tRNA synthetases class I (E and Q), catalytic domain FYA08_RS15845 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FYA08_RS15845 PF02378 Phosphotransferase system, EIIC FYA08_RS15845 PF00367 phosphotransferase system, EIIB FYA08_RS15850 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FYA08_RS15855 PF01979 Amidohydrolase family FYA08_RS15860 PF01047 MarR family FYA08_RS15860 PF00480 ROK family FYA08_RS15865 PF13344 Haloacid dehalogenase-like hydrolase FYA08_RS15870 PF00733 Asparagine synthase FYA08_RS15870 PF13537 Glutamine amidotransferase domain FYA08_RS15905 PF01494 FAD binding domain FYA08_RS15910 PF00919 Uncharacterized protein family UPF0004 FYA08_RS15910 PF01938 TRAM domain FYA08_RS15910 PF04055 Radical SAM superfamily FYA08_RS15915 PF02562 PhoH-like protein FYA08_RS15920 PF02130 Uncharacterized protein family UPF0054 FYA08_RS15925 PF03471 Transporter associated domain FYA08_RS15925 PF00571 CBS domain FYA08_RS15930 PF00795 Carbon-nitrogen hydrolase FYA08_RS15935 PF01609 Transposase DDE domain FYA08_RS15935 PF05598 Transposase domain (DUF772) FYA08_RS15940 PF00497 Bacterial extracellular solute-binding proteins, family 3 FYA08_RS15945 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS15950 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS15955 PF00005 ABC transporter FYA08_RS15960 PF01156 Inosine-uridine preferring nucleoside hydrolase FYA08_RS15965 PF00012 Hsp70 protein FYA08_RS15975 PF06889 Protein of unknown function (DUF1266) FYA08_RS15980 PF08238 Sel1 repeat FYA08_RS15990 PF06889 Protein of unknown function (DUF1266) FYA08_RS15995 PF08238 Sel1 repeat FYA08_RS16000 PF07295 Zinc-ribbon containing domain FYA08_RS16005 PF00133 tRNA synthetases class I (I, L, M and V) FYA08_RS16005 PF13603 Leucyl-tRNA synthetase, Domain 2 FYA08_RS16005 PF08264 Anticodon-binding domain of tRNA FYA08_RS16010 PF04390 Lipopolysaccharide-assembly FYA08_RS16015 PF06144 DNA polymerase III, delta subunit FYA08_RS16015 PF14840 Processivity clamp loader gamma complex DNA pol III C-term FYA08_RS16020 PF01467 Cytidylyltransferase-like FYA08_RS16025 PF00300 Histidine phosphatase superfamily (branch 1) FYA08_RS16035 PF02590 Predicted SPOUT methyltransferase FYA08_RS16040 PF03717 Penicillin-binding Protein dimerisation domain FYA08_RS16040 PF00905 Penicillin binding protein transpeptidase domain FYA08_RS16045 PF01098 Cell cycle protein FYA08_RS16050 PF03330 Lytic transglycolase FYA08_RS16050 PF05036 Sporulation related domain FYA08_RS16055 PF07943 Penicillin-binding protein 5, C-terminal domain FYA08_RS16055 PF00768 D-alanyl-D-alanine carboxypeptidase FYA08_RS16060 PF04359 Protein of unknown function (DUF493) FYA08_RS16065 PF03099 Biotin/lipoate A/B protein ligase family FYA08_RS16070 PF03466 LysR substrate binding domain FYA08_RS16070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS16075 PF04055 Radical SAM superfamily FYA08_RS16075 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FYA08_RS16080 PF02416 mttA/Hcf106 family FYA08_RS16090 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FYA08_RS16095 PF00313 'Cold-shock' DNA-binding domain FYA08_RS16100 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP FYA08_RS16105 PF03606 C4-dicarboxylate anaerobic carrier FYA08_RS16110 PF00072 Response regulator receiver domain FYA08_RS16110 PF12431 Transcriptional regulator FYA08_RS16115 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FYA08_RS16115 PF17203 Single cache domain 3 FYA08_RS16115 PF00989 PAS fold FYA08_RS16115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS16120 PF08218 Citrate lyase ligase C-terminal domain FYA08_RS16125 PF06857 Malonate decarboxylase delta subunit (MdcD) FYA08_RS16130 PF03328 HpcH/HpaI aldolase/citrate lyase family FYA08_RS16135 PF04223 Citrate lyase, alpha subunit (CitF) FYA08_RS16140 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase FYA08_RS16145 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FYA08_RS16150 PF00939 Sodium:sulfate symporter transmembrane region FYA08_RS16155 PF00445 Ribonuclease T2 family FYA08_RS16160 PF14760 Rnk N-terminus FYA08_RS16160 PF01272 Transcription elongation factor, GreA/GreB, C-term FYA08_RS16165 PF08240 Alcohol dehydrogenase GroES-like domain FYA08_RS16165 PF13823 Alcohol dehydrogenase GroES-associated FYA08_RS16165 PF00107 Zinc-binding dehydrogenase FYA08_RS16170 PF00582 Universal stress protein family FYA08_RS16175 PF07992 Pyridine nucleotide-disulphide oxidoreductase FYA08_RS16175 PF13192 Thioredoxin domain FYA08_RS16180 PF10417 C-terminal domain of 1-Cys peroxiredoxin FYA08_RS16180 PF00578 AhpC/TSA family FYA08_RS16185 PF13098 Thioredoxin-like domain FYA08_RS16190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS16190 PF03466 LysR substrate binding domain FYA08_RS16195 PF11922 Domain of unknown function (DUF3440) FYA08_RS16195 PF01507 Phosphoadenosine phosphosulfate reductase family FYA08_RS16200 PF02195 ParB-like nuclease domain FYA08_RS16205 PF00155 Aminotransferase class I and II FYA08_RS16210 PF00465 Iron-containing alcohol dehydrogenase FYA08_RS16215 PF04328 Selenoprotein, putative FYA08_RS16220 PF13722 5TM C-terminal transporter carbon starvation CstA FYA08_RS16220 PF02554 Carbon starvation protein CstA FYA08_RS16225 PF03061 Thioesterase superfamily FYA08_RS16235 PF00550 Phosphopantetheine attachment site FYA08_RS16235 PF00857 Isochorismatase family FYA08_RS16240 PF00501 AMP-binding enzyme FYA08_RS16240 PF13193 AMP-binding enzyme C-terminal domain FYA08_RS16245 PF00425 chorismate binding enzyme FYA08_RS16250 PF01497 Periplasmic binding protein FYA08_RS16255 PF05977 Transmembrane secretion effector FYA08_RS16260 PF01032 FecCD transport family FYA08_RS16265 PF01032 FecCD transport family FYA08_RS16270 PF00005 ABC transporter FYA08_RS16275 PF02706 Chain length determinant protein FYA08_RS16280 PF00668 Condensation domain FYA08_RS16280 PF00975 Thioesterase domain FYA08_RS16280 PF13193 AMP-binding enzyme C-terminal domain FYA08_RS16280 PF00501 AMP-binding enzyme FYA08_RS16280 PF00550 Phosphopantetheine attachment site FYA08_RS16285 PF03621 MbtH-like protein FYA08_RS16290 PF00756 Putative esterase FYA08_RS16290 PF11806 Domain of unknown function (DUF3327) FYA08_RS16295 PF07715 TonB-dependent Receptor Plug Domain FYA08_RS16295 PF00593 TonB dependent receptor FYA08_RS16300 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FYA08_RS16300 PF01648 4'-phosphopantetheinyl transferase superfamily FYA08_RS16305 PF01609 Transposase DDE domain FYA08_RS16310 PF01848 Hok/gef family FYA08_RS16320 PF04107 Glutamate-cysteine ligase family 2(GCS2) FYA08_RS16325 PF06643 Protein of unknown function (DUF1158) FYA08_RS16330 PF04237 YjbR FYA08_RS16335 PF00881 Nitroreductase family FYA08_RS16340 PF00924 Mechanosensitive ion channel FYA08_RS16345 PF00324 Amino acid permease FYA08_RS16350 PF00873 AcrB/AcrD/AcrF family FYA08_RS16355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FYA08_RS16355 PF00529 HlyD membrane-fusion protein of T1SS FYA08_RS16360 PF11604 Copper binding periplasmic protein CusF FYA08_RS16365 PF02321 Outer membrane efflux protein FYA08_RS16370 PF00486 Transcriptional regulatory protein, C terminal FYA08_RS16370 PF00072 Response regulator receiver domain FYA08_RS16375 PF00672 HAMP domain FYA08_RS16375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS16375 PF00512 His Kinase A (phospho-acceptor) domain FYA08_RS16380 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FYA08_RS16380 PF13632 Glycosyl transferase family group 2 FYA08_RS16385 PF13283 Bacteriophage N adsorption protein A C-term FYA08_RS16390 PF14488 Domain of unknown function (DUF4434) FYA08_RS16395 PF12833 Helix-turn-helix domain FYA08_RS16400 PF01278 Omptin family FYA08_RS16405 PF12833 Helix-turn-helix domain FYA08_RS16415 PF08242 Methyltransferase domain FYA08_RS16425 PF02413 Caudovirales tail fibre assembly protein, lambda gpK FYA08_RS16430 PF07471 Phage DNA packaging protein Nu1 FYA08_RS16435 PF13132 Domain of unknown function (DUF3950) FYA08_RS16445 PF07166 Protein of unknown function (DUF1398) FYA08_RS16450 PF06291 Bor protein FYA08_RS16455 PF06085 Lipoprotein Rz1 precursor FYA08_RS16460 PF00959 Phage lysozyme FYA08_RS16465 PF04971 Bacteriophage P21 holin S FYA08_RS16470 PF00267 Gram-negative porin FYA08_RS16475 PF01609 Transposase DDE domain FYA08_RS16475 PF05598 Transposase domain (DUF772) FYA08_RS16480 PF06530 Phage antitermination protein Q FYA08_RS16490 PF05866 Endodeoxyribonuclease RusA FYA08_RS16495 PF07102 Protein of unknown function (DUF1364) FYA08_RS16515 PF12833 Helix-turn-helix domain FYA08_RS16520 PF01161 Phosphatidylethanolamine-binding protein FYA08_RS16525 PF00239 Resolvase, N terminal domain FYA08_RS16525 PF13408 Recombinase zinc beta ribbon domain FYA08_RS16525 PF07508 Recombinase FYA08_RS16535 PF00893 Small Multidrug Resistance protein FYA08_RS16565 PF00589 Phage integrase family FYA08_RS16590 PF00419 Fimbrial protein FYA08_RS16595 PF00419 Fimbrial protein FYA08_RS16600 PF13954 PapC N-terminal domain FYA08_RS16600 PF00577 Outer membrane usher protein FYA08_RS16600 PF13953 PapC C-terminal domain FYA08_RS16605 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FYA08_RS16605 PF02753 Pili assembly chaperone PapD, C-terminal domain FYA08_RS16610 PF00419 Fimbrial protein FYA08_RS16615 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FYA08_RS16615 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FYA08_RS16625 PF04307 LexA-binding, inner membrane-associated putative hydrolase FYA08_RS16630 PF09190 DALR domain FYA08_RS16630 PF01406 tRNA synthetases class I (C) catalytic domain FYA08_RS16635 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FYA08_RS16640 PF12850 Calcineurin-like phosphoesterase superfamily domain FYA08_RS16645 PF00731 AIR carboxylase FYA08_RS16650 PF02222 ATP-grasp domain FYA08_RS16650 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FYA08_RS16655 PF00696 Amino acid kinase family FYA08_RS16660 PF11392 Protein of unknown function (DUF2877) FYA08_RS16665 PF06545 Protein of unknown function (DUF1116) FYA08_RS16670 PF02629 CoA binding domain FYA08_RS16670 PF00549 CoA-ligase FYA08_RS16675 PF02615 Malate/L-lactate dehydrogenase FYA08_RS16680 PF01546 Peptidase family M20/M25/M40 FYA08_RS16685 PF05899 Protein of unknown function (DUF861) FYA08_RS16685 PF07883 Cupin domain FYA08_RS16690 PF02595 Glycerate kinase family FYA08_RS16695 PF00860 Permease family FYA08_RS16700 PF01979 Amidohydrolase family FYA08_RS16705 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FYA08_RS16710 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FYA08_RS16710 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FYA08_RS16715 PF01261 Xylose isomerase-like TIM barrel FYA08_RS16720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FYA08_RS16720 PF00205 Thiamine pyrophosphate enzyme, central domain FYA08_RS16720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FYA08_RS16725 PF01614 Bacterial transcriptional regulator FYA08_RS16725 PF09339 IclR helix-turn-helix domain FYA08_RS16730 PF04115 Ureidoglycolate lyase FYA08_RS16735 PF03466 LysR substrate binding domain FYA08_RS16735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS16760 PF15631 NTF2 fold immunity protein FYA08_RS16765 PF03527 RHS protein FYA08_RS16765 PF05593 RHS Repeat FYA08_RS16765 PF14220 Domain of unknown function (DUF4329) FYA08_RS16775 PF00005 ABC transporter FYA08_RS16780 PF13472 GDSL-like Lipase/Acylhydrolase family FYA08_RS16785 PF00106 short chain dehydrogenase FYA08_RS16790 PF00085 Thioredoxin FYA08_RS16795 PF03649 Uncharacterised protein family (UPF0014) FYA08_RS16800 PF00005 ABC transporter FYA08_RS16805 PF01145 SPFH domain / Band 7 family FYA08_RS16805 PF16200 C-terminal region of band_7 FYA08_RS16810 PF01957 NfeD-like C-terminal, partner-binding FYA08_RS16815 PF13411 MerR HTH family regulatory protein FYA08_RS16820 PF13520 Amino acid permease FYA08_RS16825 PF04960 Glutaminase FYA08_RS16830 PF00403 Heavy-metal-associated domain FYA08_RS16835 PF01381 Helix-turn-helix FYA08_RS16845 PF01963 TraB family FYA08_RS16850 PF04073 Aminoacyl-tRNA editing domain FYA08_RS16855 PF00149 Calcineurin-like phosphoesterase FYA08_RS16855 PF02872 5'-nucleotidase, C-terminal domain FYA08_RS16860 PF07690 Major Facilitator Superfamily FYA08_RS16865 PF00999 Sodium/hydrogen exchanger family FYA08_RS16865 PF02254 TrkA-N domain FYA08_RS16870 PF00294 pfkB family carbohydrate kinase FYA08_RS16875 PF07859 alpha/beta hydrolase fold FYA08_RS16880 PF00762 Ferrochelatase FYA08_RS16890 PF05191 Adenylate kinase, active site lid FYA08_RS16895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS16895 PF00183 Hsp90 protein FYA08_RS16900 PF13662 Toprim domain FYA08_RS16900 PF02132 RecR protein FYA08_RS16905 PF02575 YbaB/EbfC DNA-binding family FYA08_RS16910 PF12170 DNA polymerase III tau subunit V interacting with alpha FYA08_RS16910 PF12169 DNA polymerase III subunits gamma and tau domain III FYA08_RS16910 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FYA08_RS16915 PF00156 Phosphoribosyl transferase domain FYA08_RS16920 PF04304 Protein of unknown function (DUF454) FYA08_RS16925 PF07445 Primosomal replication protein priC FYA08_RS16930 PF10689 Protein of unknown function (DUF2496) FYA08_RS16935 PF12794 Mechanosensitive ion channel inner membrane domain 1 FYA08_RS16935 PF00924 Mechanosensitive ion channel FYA08_RS16935 PF12795 Mechanosensitive ion channel porin domain FYA08_RS16940 PF00440 Bacterial regulatory proteins, tetR family FYA08_RS16940 PF08361 MAATS-type transcriptional repressor, C-terminal region FYA08_RS16945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FYA08_RS16945 PF00529 HlyD membrane-fusion protein of T1SS FYA08_RS16950 PF00873 AcrB/AcrD/AcrF family FYA08_RS16955 PF05598 Transposase domain (DUF772) FYA08_RS16955 PF01609 Transposase DDE domain FYA08_RS16960 PF10757 Biofilm formation regulator YbaJ FYA08_RS16965 PF05321 Haemolysin expression modulating protein FYA08_RS16970 PF12464 Maltose acetyltransferase FYA08_RS16970 PF14602 Hexapeptide repeat of succinyl-transferase FYA08_RS16975 PF10777 Inner membrane protein YlaC FYA08_RS16980 PF00563 EAL domain FYA08_RS16980 PF12792 CSS motif domain associated with EAL FYA08_RS16985 PF07237 Protein of unknown function (DUF1428) FYA08_RS16995 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FYA08_RS17000 PF09619 Type III secretion system lipoprotein chaperone (YscW) FYA08_RS17010 PF00909 Ammonium Transporter Family FYA08_RS17015 PF00543 Nitrogen regulatory protein P-II FYA08_RS17020 PF00005 ABC transporter FYA08_RS17020 PF00664 ABC transporter transmembrane region FYA08_RS17025 PF00664 ABC transporter transmembrane region FYA08_RS17025 PF00005 ABC transporter FYA08_RS17030 PF01037 Lrp/AsnC ligand binding domain FYA08_RS17030 PF13404 AsnC-type helix-turn-helix domain FYA08_RS17040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FYA08_RS17040 PF12793 Sugar transport-related sRNA regulator N-term FYA08_RS17045 PF06508 Queuosine biosynthesis protein QueC FYA08_RS17060 PF13145 PPIC-type PPIASE domain FYA08_RS17065 PF00216 Bacterial DNA-binding protein FYA08_RS17070 PF02190 ATP-dependent protease La (LON) substrate-binding domain FYA08_RS17070 PF00004 ATPase family associated with various cellular activities (AAA) FYA08_RS17070 PF05362 Lon protease (S16) C-terminal proteolytic domain FYA08_RS17075 PF07724 AAA domain (Cdc48 subfamily) FYA08_RS17075 PF10431 C-terminal, D2-small domain, of ClpB protein FYA08_RS17075 PF06689 ClpX C4-type zinc finger FYA08_RS17080 PF00574 Clp protease FYA08_RS17085 PF05697 Bacterial trigger factor protein (TF) FYA08_RS17085 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FYA08_RS17085 PF05698 Bacterial trigger factor protein (TF) C-terminus FYA08_RS17090 PF01722 BolA-like protein FYA08_RS17095 PF03923 Uncharacterized lipoprotein FYA08_RS17095 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FYA08_RS17100 PF07690 Major Facilitator Superfamily FYA08_RS17105 PF06481 COX Aromatic Rich Motif FYA08_RS17105 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FYA08_RS17110 PF00115 Cytochrome C and Quinol oxidase polypeptide I FYA08_RS17115 PF00510 Cytochrome c oxidase subunit III FYA08_RS17120 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FYA08_RS17125 PF01040 UbiA prenyltransferase family FYA08_RS17130 PF07690 Major Facilitator Superfamily FYA08_RS17135 PF04461 Protein of unknown function (DUF520) FYA08_RS17140 PF02558 Ketopantoate reductase PanE/ApbA FYA08_RS17140 PF08546 Ketopantoate reductase PanE/ApbA C terminal FYA08_RS17145 PF01965 DJ-1/PfpI family FYA08_RS17150 PF02926 THUMP domain FYA08_RS17150 PF02568 Thiamine biosynthesis protein (ThiI) FYA08_RS17155 PF02609 Exonuclease VII small subunit FYA08_RS17160 PF00348 Polyprenyl synthetase FYA08_RS17165 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FYA08_RS17165 PF02779 Transketolase, pyrimidine binding domain FYA08_RS17165 PF02780 Transketolase, C-terminal domain FYA08_RS17170 PF00248 Aldo/keto reductase family FYA08_RS17175 PF04608 Phosphatidylglycerophosphatase A FYA08_RS17180 PF02769 AIR synthase related protein, C-terminal domain FYA08_RS17180 PF00586 AIR synthase related protein, N-terminal domain FYA08_RS17185 PF01029 NusB family FYA08_RS17190 PF00885 6,7-dimethyl-8-ribityllumazine synthase FYA08_RS17195 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FYA08_RS17195 PF01872 RibD C-terminal domain FYA08_RS17200 PF03477 ATP cone domain FYA08_RS17205 PF11622 Protein of unknown function (DUF3251) FYA08_RS17210 PF03502 Nucleoside-specific channel-forming protein, Tsx FYA08_RS17215 PF01844 HNH endonuclease FYA08_RS17220 PF02355 Protein export membrane protein FYA08_RS17220 PF07549 SecD/SecF GG Motif FYA08_RS17225 PF07549 SecD/SecF GG Motif FYA08_RS17225 PF02355 Protein export membrane protein FYA08_RS17225 PF13721 SecD export protein N-terminal TM region FYA08_RS17230 PF02699 Preprotein translocase subunit FYA08_RS17235 PF01702 Queuine tRNA-ribosyltransferase FYA08_RS17240 PF02547 Queuosine biosynthesis protein FYA08_RS17245 PF04336 Acyl carrier protein phosphodiesterase FYA08_RS17250 PF02903 Alpha amylase, N-terminal ig-like domain FYA08_RS17250 PF00128 Alpha amylase, catalytic domain FYA08_RS17255 PF00324 Amino acid permease FYA08_RS17260 PF05525 Branched-chain amino acid transport protein FYA08_RS17265 PF11808 Phosphate regulon sensor protein PhoR FYA08_RS17265 PF00512 His Kinase A (phospho-acceptor) domain FYA08_RS17265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS17265 PF00989 PAS fold FYA08_RS17270 PF00486 Transcriptional regulatory protein, C terminal FYA08_RS17270 PF00072 Response regulator receiver domain FYA08_RS17275 PF12320 Type 5 capsule protein repressor C-terminal domain FYA08_RS17275 PF00149 Calcineurin-like phosphoesterase FYA08_RS17280 PF13476 AAA domain FYA08_RS17285 PF07690 Major Facilitator Superfamily FYA08_RS17290 PF00480 ROK family FYA08_RS17295 PF04381 Putative exonuclease, RdgC FYA08_RS17310 PF06865 Pyrimidine/purine nucleoside phosphorylase FYA08_RS17315 PF07302 AroM protein FYA08_RS17320 PF16362 YaiA protein FYA08_RS17325 PF01202 Shikimate kinase FYA08_RS17330 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FYA08_RS17335 PF14748 Pyrroline-5-carboxylate reductase dimerisation FYA08_RS17335 PF03807 NADP oxidoreductase coenzyme F420-dependent FYA08_RS17340 PF05230 MASE2 domain FYA08_RS17340 PF00990 Diguanylate cyclase, GGDEF domain FYA08_RS17345 PF07769 psiF repeat FYA08_RS17350 PF00245 Alkaline phosphatase FYA08_RS17355 PF10796 Sigma-S stabilisation anti-adaptor protein FYA08_RS17360 PF07478 D-ala D-ala ligase C-terminus FYA08_RS17360 PF01820 D-ala D-ala ligase N-terminus FYA08_RS17365 PF10953 Protein of unknown function (DUF2754) FYA08_RS17370 PF10954 Protein of unknown function (DUF2755) FYA08_RS17375 PF07759 Protein of unknown function (DUF1615) FYA08_RS17380 PF05992 SbmA/BacA-like family FYA08_RS17385 PF00144 Beta-lactamase FYA08_RS17390 PF15977 Winged helix-turn-helix DNA binding FYA08_RS17405 PF03797 Autotransporter beta-domain FYA08_RS17405 PF03212 Pertactin FYA08_RS17410 PF00490 Delta-aminolevulinic acid dehydratase FYA08_RS17415 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FYA08_RS17420 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS17425 PF00005 ABC transporter FYA08_RS17430 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FYA08_RS17435 PF02585 GlcNAc-PI de-N-acetylase FYA08_RS17445 PF00535 Glycosyl transferase family 2 FYA08_RS17460 PF00132 Bacterial transferase hexapeptide (six repeats) FYA08_RS17470 PF02583 Metal-sensitive transcriptional repressor FYA08_RS17475 PF08240 Alcohol dehydrogenase GroES-like domain FYA08_RS17475 PF00107 Zinc-binding dehydrogenase FYA08_RS17480 PF00756 Putative esterase FYA08_RS17485 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) FYA08_RS17490 PF07690 Major Facilitator Superfamily FYA08_RS17495 PF07836 DmpG-like communication domain FYA08_RS17495 PF00682 HMGL-like FYA08_RS17500 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation FYA08_RS17500 PF01118 Semialdehyde dehydrogenase, NAD binding domain FYA08_RS17505 PF01557 Fumarylacetoacetate (FAA) hydrolase family FYA08_RS17510 PF12697 Alpha/beta hydrolase family FYA08_RS17515 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FYA08_RS17520 PF01494 FAD binding domain FYA08_RS17525 PF01614 Bacterial transcriptional regulator FYA08_RS17525 PF09339 IclR helix-turn-helix domain FYA08_RS17530 PF00356 Bacterial regulatory proteins, lacI family FYA08_RS17535 PF02929 Beta galactosidase small chain FYA08_RS17535 PF02837 Glycosyl hydrolases family 2, sugar binding domain FYA08_RS17535 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FYA08_RS17535 PF16353 Domain of unknown function(DUF4981) FYA08_RS17535 PF00703 Glycosyl hydrolases family 2 FYA08_RS17550 PF00267 Gram-negative porin FYA08_RS17555 PF01472 PUA domain FYA08_RS17555 PF00696 Amino acid kinase family FYA08_RS17560 PF00171 Aldehyde dehydrogenase family FYA08_RS17570 PF06755 CbtA_toxin of type IV toxin-antitoxin system FYA08_RS17575 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A FYA08_RS17580 PF06174 Protein of unknown function (DUF987) FYA08_RS17585 PF04002 RadC-like JAB domain FYA08_RS17590 PF03230 Antirestriction protein FYA08_RS17595 PF06006 Bacterial protein of unknown function (DUF905) FYA08_RS17620 PF06067 Domain of unknown function (DUF932) FYA08_RS17625 PF01926 50S ribosome-binding GTPase FYA08_RS17630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS17630 PF03466 LysR substrate binding domain FYA08_RS17645 PF00665 Integrase core domain FYA08_RS17645 PF13936 Helix-turn-helix domain FYA08_RS17665 PF01609 Transposase DDE domain FYA08_RS17665 PF05598 Transposase domain (DUF772) FYA08_RS17670 PF00324 Amino acid permease FYA08_RS17675 PF02574 Homocysteine S-methyltransferase FYA08_RS17680 PF08402 TOBE domain FYA08_RS17680 PF00005 ABC transporter FYA08_RS17700 PF01527 Transposase FYA08_RS17705 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A FYA08_RS17710 PF00665 Integrase core domain FYA08_RS17715 PF00701 Dihydrodipicolinate synthetase family FYA08_RS17720 PF00920 Dehydratase family FYA08_RS17730 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain FYA08_RS17730 PF04616 Glycosyl hydrolases family 43 FYA08_RS17735 PF01614 Bacterial transcriptional regulator FYA08_RS17735 PF09339 IclR helix-turn-helix domain FYA08_RS17740 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FYA08_RS17740 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FYA08_RS17765 PF07638 ECF sigma factor FYA08_RS17785 PF00589 Phage integrase family FYA08_RS17785 PF13356 Arm DNA-binding domain FYA08_RS17790 PF03466 LysR substrate binding domain FYA08_RS17795 PF02625 XdhC and CoxI family FYA08_RS17795 PF13478 XdhC Rossmann domain FYA08_RS17805 PF00941 FAD binding domain in molybdopterin dehydrogenase FYA08_RS17805 PF03450 CO dehydrogenase flavoprotein C-terminal domain FYA08_RS17810 PF01799 [2Fe-2S] binding domain FYA08_RS17810 PF00111 2Fe-2S iron-sulfur cluster binding domain FYA08_RS17815 PF07274 Protein of unknown function (DUF1440) FYA08_RS17820 PF03692 Putative zinc- or iron-chelating domain FYA08_RS17835 PF16967 E-set like domain FYA08_RS17835 PF15976 CS1-pili formation C-terminal FYA08_RS17840 PF18649 EcpB C-terminal domain FYA08_RS17845 PF16449 Fimbrillin MatB FYA08_RS17850 PF00196 Bacterial regulatory proteins, luxR family FYA08_RS17860 PF00444 Ribosomal protein L36 FYA08_RS17865 PF01197 Ribosomal protein L31 FYA08_RS17880 PF11924 Inverse autotransporter, beta-domain FYA08_RS17900 PF04224 Protein of unknown function, DUF417 FYA08_RS17905 PF07338 Protein of unknown function (DUF1471) FYA08_RS17910 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FYA08_RS17910 PF07992 Pyridine nucleotide-disulphide oxidoreductase FYA08_RS17915 PF12833 Helix-turn-helix domain FYA08_RS17915 PF12852 Cupin FYA08_RS17920 PF02754 Cysteine-rich domain FYA08_RS17935 PF07417 Sigma factor-binding transcriptional regulator Crl FYA08_RS17940 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) FYA08_RS17945 PF00156 Phosphoribosyl transferase domain FYA08_RS17950 PF07687 Peptidase dimerisation domain FYA08_RS17950 PF01546 Peptidase family M20/M25/M40 FYA08_RS17955 PF00472 RF-1 domain FYA08_RS17965 PF13673 Acetyltransferase (GNAT) domain FYA08_RS17970 PF13957 Toxin YafO, type II toxin-antitoxin system FYA08_RS17980 PF11799 impB/mucB/samB family C-terminal domain FYA08_RS17980 PF11798 IMS family HHH motif FYA08_RS17980 PF00817 impB/mucB/samB family FYA08_RS17985 PF13677 Membrane MotB of proton-channel complex MotA/MotB FYA08_RS17985 PF00691 OmpA family FYA08_RS17990 PF00771 FHIPEP family FYA08_RS18000 PF00877 NlpC/P60 family FYA08_RS18005 PF04221 RelB antitoxin FYA08_RS18010 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ FYA08_RS18015 PF03734 L,D-transpeptidase catalytic domain FYA08_RS18020 PF13230 Glutamine amidotransferases class-II FYA08_RS18025 PF13580 SIS domain FYA08_RS18030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FYA08_RS18030 PF02770 Acyl-CoA dehydrogenase, middle domain FYA08_RS18030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FYA08_RS18030 PF09317 Domain of unknown function (DUF1974) FYA08_RS18040 PF00795 Carbon-nitrogen hydrolase FYA08_RS18070 PF00929 Exonuclease FYA08_RS18075 PF00075 RNase H FYA08_RS18080 PF08241 Methyltransferase domain FYA08_RS18085 PF00753 Metallo-beta-lactamase superfamily FYA08_RS18085 PF16123 Hydroxyacylglutathione hydrolase C-terminus FYA08_RS18090 PF01476 LysM domain FYA08_RS18090 PF01464 Transglycosylase SLT domain FYA08_RS18095 PF08241 Methyltransferase domain FYA08_RS18100 PF03372 Endonuclease/Exonuclease/phosphatase family FYA08_RS18105 PF03466 LysR substrate binding domain FYA08_RS18105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS18110 PF00248 Aldo/keto reductase family FYA08_RS18150 PF00005 ABC transporter FYA08_RS18150 PF09383 NIL domain FYA08_RS18155 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS18160 PF03180 NLPA lipoprotein FYA08_RS18165 PF16358 RcsF lipoprotein FYA08_RS18170 PF01980 tRNA-methyltransferase O FYA08_RS18170 PF18389 TrmO C-terminal domain FYA08_RS18175 PF04073 Aminoacyl-tRNA editing domain FYA08_RS18175 PF03129 Anticodon binding domain FYA08_RS18175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FYA08_RS18180 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family FYA08_RS18185 PF17185 NlpE C-terminal OB domain FYA08_RS18185 PF04170 NlpE N-terminal domain FYA08_RS18190 PF00472 RF-1 domain FYA08_RS18195 PF07152 YaeQ protein FYA08_RS18200 PF06786 Uncharacterised protein family (UPF0253) FYA08_RS18205 PF07073 Modulator of Rho-dependent transcription termination (ROF) FYA08_RS18210 PF01171 PP-loop family FYA08_RS18210 PF11734 TilS substrate C-terminal domain FYA08_RS18210 PF09179 TilS substrate binding domain FYA08_RS18215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FYA08_RS18220 PF01276 Orn/Lys/Arg decarboxylase, major domain FYA08_RS18220 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FYA08_RS18220 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FYA08_RS18225 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FYA08_RS18230 PF01336 OB-fold nucleic acid binding domain FYA08_RS18230 PF02811 PHP domain FYA08_RS18230 PF14579 Helix-hairpin-helix motif FYA08_RS18230 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FYA08_RS18230 PF07733 Bacterial DNA polymerase III alpha NTPase domain FYA08_RS18235 PF01351 Ribonuclease HII FYA08_RS18240 PF02684 Lipid-A-disaccharide synthetase FYA08_RS18245 PF00132 Bacterial transferase hexapeptide (six repeats) FYA08_RS18245 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FYA08_RS18250 PF07977 FabA-like domain FYA08_RS18255 PF00132 Bacterial transferase hexapeptide (six repeats) FYA08_RS18255 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FYA08_RS18260 PF03938 Outer membrane protein (OmpH-like) FYA08_RS18265 PF07244 Surface antigen variable number repeat FYA08_RS18265 PF01103 Surface antigen FYA08_RS18270 PF17820 PDZ domain FYA08_RS18270 PF02163 Peptidase family M50 FYA08_RS18280 PF01255 Putative undecaprenyl diphosphate synthase FYA08_RS18285 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FYA08_RS18285 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FYA08_RS18285 PF13288 DXP reductoisomerase C-terminal domain FYA08_RS18290 PF01765 Ribosome recycling factor FYA08_RS18295 PF00696 Amino acid kinase family FYA08_RS18300 PF00889 Elongation factor TS FYA08_RS18305 PF00318 Ribosomal protein S2 FYA08_RS18310 PF00557 Metallopeptidase family M24 FYA08_RS18315 PF08335 GlnD PII-uridylyltransferase FYA08_RS18315 PF01842 ACT domain FYA08_RS18315 PF01966 HD domain FYA08_RS18315 PF01909 Nucleotidyltransferase domain FYA08_RS18320 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FYA08_RS18320 PF14602 Hexapeptide repeat of succinyl-transferase FYA08_RS18320 PF00132 Bacterial transferase hexapeptide (six repeats) FYA08_RS18325 PF00149 Calcineurin-like phosphoesterase FYA08_RS18335 PF11944 Protein of unknown function (DUF3461) FYA08_RS18340 PF05651 Putative sugar diacid recognition FYA08_RS18340 PF17853 GGDEF-like domain FYA08_RS18340 PF13556 PucR C-terminal helix-turn-helix domain FYA08_RS18345 PF00595 PDZ domain FYA08_RS18350 PF13286 Phosphohydrolase-associated domain FYA08_RS18350 PF01966 HD domain FYA08_RS18355 PF01048 Phosphorylase superfamily FYA08_RS18360 PF01497 Periplasmic binding protein FYA08_RS18365 PF03458 UPF0126 domain FYA08_RS18370 PF01521 Iron-sulphur cluster biosynthesis FYA08_RS18380 PF00654 Voltage gated chloride channel FYA08_RS18385 PF00202 Aminotransferase class-III FYA08_RS18390 PF01032 FecCD transport family FYA08_RS18395 PF01497 Periplasmic binding protein FYA08_RS18400 PF00005 ABC transporter FYA08_RS18410 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal FYA08_RS18410 PF14814 Bifunctional transglycosylase second domain FYA08_RS18410 PF00905 Penicillin binding protein transpeptidase domain FYA08_RS18410 PF00912 Transglycosylase FYA08_RS18415 PF04408 Helicase associated domain (HA2) FYA08_RS18415 PF00270 DEAD/DEAH box helicase FYA08_RS18415 PF08482 ATP-dependent helicase C-terminal FYA08_RS18415 PF00271 Helicase conserved C-terminal domain FYA08_RS18420 PF02834 LigT like Phosphoesterase FYA08_RS18425 PF17746 SfsA N-terminal OB domain FYA08_RS18425 PF03749 Sugar fermentation stimulation protein RE domain FYA08_RS18430 PF01258 Prokaryotic dksA/traR C4-type zinc finger FYA08_RS18435 PF00749 tRNA synthetases class I (E and Q), catalytic domain FYA08_RS18440 PF12626 Polymerase A arginine-rich C-terminus FYA08_RS18440 PF12627 Probable RNA and SrmB- binding site of polymerase A FYA08_RS18440 PF01743 Poly A polymerase head domain FYA08_RS18445 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FYA08_RS18450 PF00419 Fimbrial protein FYA08_RS18455 PF02753 Pili assembly chaperone PapD, C-terminal domain FYA08_RS18455 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FYA08_RS18460 PF13954 PapC N-terminal domain FYA08_RS18460 PF13953 PapC C-terminal domain FYA08_RS18460 PF00577 Outer membrane usher protein FYA08_RS18465 PF00419 Fimbrial protein FYA08_RS18470 PF00419 Fimbrial protein FYA08_RS18475 PF00419 Fimbrial protein FYA08_RS18480 PF00419 Fimbrial protein FYA08_RS18485 PF02548 Ketopantoate hydroxymethyltransferase FYA08_RS18490 PF02569 Pantoate-beta-alanine ligase FYA08_RS18495 PF04754 Putative transposase, YhgA-like FYA08_RS18500 PF02261 Aspartate decarboxylase FYA08_RS18505 PF01522 Polysaccharide deacetylase FYA08_RS18510 PF03610 PTS system fructose IIA component FYA08_RS18515 PF01061 ABC-2 type transporter FYA08_RS18520 PF00005 ABC transporter FYA08_RS18525 PF00484 Carbonic anhydrase FYA08_RS18530 PF00156 Phosphoribosyl transferase domain FYA08_RS18535 PF01011 PQQ enzyme repeat FYA08_RS18540 PF07732 Multicopper oxidase FYA08_RS18540 PF07731 Multicopper oxidase FYA08_RS18540 PF00394 Multicopper oxidase FYA08_RS18545 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) FYA08_RS18550 PF17284 Spermidine synthase tetramerisation domain FYA08_RS18555 PF02675 S-adenosylmethionine decarboxylase FYA08_RS18560 PF06062 Uncharacterised protein family (UPF0231) FYA08_RS18565 PF06434 Aconitate hydratase 2 N-terminus FYA08_RS18565 PF00330 Aconitase family (aconitate hydratase) FYA08_RS18565 PF11791 Aconitate B N-terminal domain FYA08_RS18570 PF11737 Protein of unknown function (DUF3300) FYA08_RS18575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FYA08_RS18575 PF07992 Pyridine nucleotide-disulphide oxidoreductase FYA08_RS18580 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FYA08_RS18580 PF00364 Biotin-requiring enzyme FYA08_RS18580 PF02817 e3 binding domain FYA08_RS18585 PF17831 Pyruvate dehydrogenase E1 component middle domain FYA08_RS18585 PF00456 Transketolase, thiamine diphosphate binding domain FYA08_RS18590 PF00392 Bacterial regulatory proteins, gntR family FYA08_RS18590 PF07729 FCD domain FYA08_RS18595 PF00324 Amino acid permease FYA08_RS18600 PF17113 Regulatory signalling modulator protein AmpE FYA08_RS18605 PF01510 N-acetylmuramoyl-L-alanine amidase FYA08_RS18610 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FYA08_RS18610 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FYA08_RS18615 PF07963 Prokaryotic N-terminal methylation motif FYA08_RS18620 PF00437 Type II/IV secretion system protein FYA08_RS18620 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FYA08_RS18625 PF00482 Type II secretion system (T2SS), protein F FYA08_RS18630 PF00478 IMP dehydrogenase / GMP reductase domain FYA08_RS18635 PF01121 Dephospho-CoA kinase FYA08_RS18640 PF07072 Cell division protein FYA08_RS18645 PF03884 DNA gyrase inhibitor YacG FYA08_RS18650 PF00293 NUDIX domain FYA08_RS18655 PF07517 SecA DEAD-like domain FYA08_RS18655 PF07516 SecA Wing and Scaffold domain FYA08_RS18655 PF01043 SecA preprotein cross-linking domain FYA08_RS18655 PF02810 SEC-C motif FYA08_RS18660 PF06558 Secretion monitor precursor protein (SecM) FYA08_RS18665 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FYA08_RS18670 PF00091 Tubulin/FtsZ family, GTPase domain FYA08_RS18670 PF12327 FtsZ family, C-terminal domain FYA08_RS18675 PF02491 SHS2 domain inserted in FTSA FYA08_RS18680 PF08478 POTRA domain, FtsQ-type FYA08_RS18680 PF03799 Cell division protein FtsQ FYA08_RS18685 PF07478 D-ala D-ala ligase C-terminus FYA08_RS18685 PF01820 D-ala D-ala ligase N-terminus FYA08_RS18690 PF08245 Mur ligase middle domain FYA08_RS18690 PF02875 Mur ligase family, glutamate ligase domain FYA08_RS18690 PF01225 Mur ligase family, catalytic domain FYA08_RS18695 PF03033 Glycosyltransferase family 28 N-terminal domain FYA08_RS18695 PF04101 Glycosyltransferase family 28 C-terminal domain FYA08_RS18700 PF01098 Cell cycle protein FYA08_RS18705 PF08245 Mur ligase middle domain FYA08_RS18705 PF02875 Mur ligase family, glutamate ligase domain FYA08_RS18710 PF00953 Glycosyl transferase family 4 FYA08_RS18710 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FYA08_RS18715 PF02875 Mur ligase family, glutamate ligase domain FYA08_RS18715 PF08245 Mur ligase middle domain FYA08_RS18715 PF01225 Mur ligase family, catalytic domain FYA08_RS18720 PF08245 Mur ligase middle domain FYA08_RS18720 PF02875 Mur ligase family, glutamate ligase domain FYA08_RS18720 PF01225 Mur ligase family, catalytic domain FYA08_RS18725 PF00905 Penicillin binding protein transpeptidase domain FYA08_RS18725 PF03717 Penicillin-binding Protein dimerisation domain FYA08_RS18730 PF04999 Cell division protein FtsL FYA08_RS18735 PF01795 MraW methylase family FYA08_RS18740 PF02381 MraZ protein, putative antitoxin-like FYA08_RS18745 PF00356 Bacterial regulatory proteins, lacI family FYA08_RS18745 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FYA08_RS18755 PF10369 Small subunit of acetolactate synthase FYA08_RS18760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FYA08_RS18760 PF00205 Thiamine pyrophosphate enzyme, central domain FYA08_RS18760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FYA08_RS18770 PF03466 LysR substrate binding domain FYA08_RS18770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS18775 PF08054 Leucine operon leader peptide FYA08_RS18780 PF00682 HMGL-like FYA08_RS18780 PF08502 LeuA allosteric (dimerisation) domain FYA08_RS18785 PF00180 Isocitrate/isopropylmalate dehydrogenase FYA08_RS18790 PF00330 Aconitase family (aconitate hydratase) FYA08_RS18795 PF00694 Aconitase C-terminal domain FYA08_RS18800 PF07690 Major Facilitator Superfamily FYA08_RS18810 PF12793 Sugar transport-related sRNA regulator N-term FYA08_RS18810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FYA08_RS18820 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS18825 PF00005 ABC transporter FYA08_RS18830 PF09335 SNARE associated Golgi protein FYA08_RS18835 PF12833 Helix-turn-helix domain FYA08_RS18835 PF02311 AraC-like ligand binding domain FYA08_RS18840 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FYA08_RS18845 PF11762 L-arabinose isomerase C-terminal domain FYA08_RS18845 PF02610 L-arabinose isomerase FYA08_RS18850 PF00596 Class II Aldolase and Adducin N-terminal domain FYA08_RS18855 PF00136 DNA polymerase family B FYA08_RS18855 PF03104 DNA polymerase family B, exonuclease domain FYA08_RS18860 PF12137 RNA polymerase recycling family C-terminal FYA08_RS18860 PF18339 RapA N-terminal Tudor like domain 1 FYA08_RS18860 PF00176 SNF2 family N-terminal domain FYA08_RS18860 PF00271 Helicase conserved C-terminal domain FYA08_RS18860 PF18337 RapA N-terminal Tudor like domain FYA08_RS18865 PF00849 RNA pseudouridylate synthase FYA08_RS18880 PF05099 Tellurite resistance protein TerB FYA08_RS18880 PF00226 DnaJ domain FYA08_RS18885 PF03968 OstA-like protein FYA08_RS18885 PF04453 LPS transport system D FYA08_RS18890 PF00639 PPIC-type PPIASE domain FYA08_RS18890 PF09312 SurA N-terminal domain FYA08_RS18895 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FYA08_RS18900 PF00398 Ribosomal RNA adenine dimethylase FYA08_RS18905 PF04379 ApaG domain FYA08_RS18910 PF00149 Calcineurin-like phosphoesterase FYA08_RS18915 PF00186 Dihydrofolate reductase FYA08_RS18920 PF00999 Sodium/hydrogen exchanger family FYA08_RS18920 PF02254 TrkA-N domain FYA08_RS18925 PF02525 Flavodoxin-like fold FYA08_RS18930 PF00083 Sugar (and other) transporter FYA08_RS18940 PF01494 FAD binding domain FYA08_RS18945 PF01012 Electron transfer flavoprotein domain FYA08_RS18945 PF00766 Electron transfer flavoprotein FAD-binding domain FYA08_RS18950 PF01012 Electron transfer flavoprotein domain FYA08_RS18955 PF02028 BCCT, betaine/carnitine/choline family transporter FYA08_RS18960 PF02770 Acyl-CoA dehydrogenase, middle domain FYA08_RS18960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FYA08_RS18960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FYA08_RS18965 PF02515 CoA-transferase family III FYA08_RS18970 PF13193 AMP-binding enzyme C-terminal domain FYA08_RS18970 PF00501 AMP-binding enzyme FYA08_RS18975 PF00378 Enoyl-CoA hydratase/isomerase FYA08_RS18980 PF00132 Bacterial transferase hexapeptide (six repeats) FYA08_RS18985 PF07180 CaiF/GrlA transcriptional regulator FYA08_RS18990 PF02142 MGS-like domain FYA08_RS18990 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FYA08_RS18990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FYA08_RS18995 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FYA08_RS18995 PF00117 Glutamine amidotransferase class-I FYA08_RS19000 PF01113 Dihydrodipicolinate reductase, N-terminus FYA08_RS19000 PF05173 Dihydrodipicolinate reductase, C-terminus FYA08_RS19005 PF01156 Inosine-uridine preferring nucleoside hydrolase FYA08_RS19010 PF02401 LytB protein FYA08_RS19015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FYA08_RS19020 PF01252 Signal peptidase (SPase) II FYA08_RS19025 PF08264 Anticodon-binding domain of tRNA FYA08_RS19025 PF00133 tRNA synthetases class I (I, L, M and V) FYA08_RS19025 PF06827 Zinc finger found in FPG and IleRS FYA08_RS19030 PF06574 FAD synthetase FYA08_RS19030 PF01687 Riboflavin kinase FYA08_RS19035 PF10837 Protein of unknown function (DUF2575) FYA08_RS19040 PF01649 Ribosomal protein S20 FYA08_RS19050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS19050 PF03466 LysR substrate binding domain FYA08_RS19055 PF06965 Na+/H+ antiporter 1 FYA08_RS19060 PF01848 Hok/gef family FYA08_RS19065 PF01609 Transposase DDE domain FYA08_RS19070 PF00684 DnaJ central domain FYA08_RS19070 PF01556 DnaJ C terminal domain FYA08_RS19070 PF00226 DnaJ domain FYA08_RS19075 PF00012 Hsp70 protein FYA08_RS19080 PF10807 Protein of unknown function (DUF2541) FYA08_RS19085 PF03981 Ubiquinol-cytochrome C chaperone FYA08_RS19085 PF13099 Domain of unknown function (DUF3944) FYA08_RS19090 PF01184 GPR1/FUN34/yaaH family FYA08_RS19095 PF00994 Probable molybdopterin binding domain FYA08_RS19100 PF00923 Transaldolase/Fructose-6-phosphate aldolase FYA08_RS19105 PF01235 Sodium:alanine symporter family FYA08_RS19110 PF03883 Peroxide stress protein YaaA FYA08_RS19115 PF10697 Protein of unknown function (DUF2502) FYA08_RS19120 PF00291 Pyridoxal-phosphate dependent enzyme FYA08_RS19120 PF14821 Threonine synthase N terminus FYA08_RS19130 PF00742 Homoserine dehydrogenase FYA08_RS19130 PF00696 Amino acid kinase family FYA08_RS19130 PF03447 Homoserine dehydrogenase, NAD binding domain FYA08_RS19130 PF13840 ACT domain FYA08_RS19130 PF01842 ACT domain FYA08_RS19135 PF08254 Threonine leader peptide FYA08_RS19140 PF00588 SpoU rRNA Methylase family FYA08_RS19150 PF00486 Transcriptional regulatory protein, C terminal FYA08_RS19150 PF00072 Response regulator receiver domain FYA08_RS19155 PF06123 Inner membrane protein CreD FYA08_RS19160 PF00512 His Kinase A (phospho-acceptor) domain FYA08_RS19160 PF00672 HAMP domain FYA08_RS19160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS19165 PF00072 Response regulator receiver domain FYA08_RS19165 PF00486 Transcriptional regulatory protein, C terminal FYA08_RS19170 PF05981 CreA protein FYA08_RS19175 PF12833 Helix-turn-helix domain FYA08_RS19175 PF06445 GyrI-like small molecule binding domain FYA08_RS19180 PF00300 Histidine phosphatase superfamily (branch 1) FYA08_RS19185 PF01931 Protein of unknown function DUF84 FYA08_RS19190 PF01371 Trp repressor protein FYA08_RS19195 PF01464 Transglycosylase SLT domain FYA08_RS19195 PF14718 Soluble lytic murein transglycosylase L domain FYA08_RS19200 PF00005 ABC transporter FYA08_RS19200 PF12848 ABC transporter FYA08_RS19205 PF01381 Helix-turn-helix FYA08_RS19205 PF13521 AAA domain FYA08_RS19210 PF18073 Rubredoxin metal binding domain FYA08_RS19215 PF18429 Domain of unknown function (DUF5609) FYA08_RS19220 PF10144 Bacterial virulence factor haemolysin FYA08_RS19225 PF10437 Bacterial lipoate protein ligase C-terminus FYA08_RS19225 PF03099 Biotin/lipoate A/B protein ligase family FYA08_RS19230 PF07804 HipA-like C-terminal domain FYA08_RS19235 PF01048 Phosphorylase superfamily FYA08_RS19240 PF01676 Metalloenzyme superfamily FYA08_RS19245 PF02885 Glycosyl transferase family, helical bundle domain FYA08_RS19245 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FYA08_RS19245 PF00591 Glycosyl transferase family, a/b domain FYA08_RS19250 PF01791 DeoC/LacD family aldolase FYA08_RS19255 PF11230 Protein of unknown function (DUF3029) FYA08_RS19260 PF04055 Radical SAM superfamily FYA08_RS19265 PF01026 TatD related DNase FYA08_RS19270 PF01734 Patatin-like phospholipase FYA08_RS19275 PF07043 Protein of unknown function (DUF1328) FYA08_RS19280 PF04972 BON domain FYA08_RS19285 PF00009 Elongation factor Tu GTP binding domain FYA08_RS19285 PF03144 Elongation factor Tu domain 2 FYA08_RS19285 PF16658 Class II release factor RF3, C-terminal domain FYA08_RS19290 PF13419 Haloacid dehalogenase-like hydrolase FYA08_RS19295 PF00583 Acetyltransferase (GNAT) family FYA08_RS19300 PF03603 DNA polymerase III psi subunit FYA08_RS19305 PF08468 Methyltransferase small domain N-terminal FYA08_RS19305 PF05175 Methyltransferase small domain FYA08_RS19325 PF07256 Protein of unknown function (DUF1435) FYA08_RS19330 PF06276 Ferric iron reductase FhuF-like transporter FYA08_RS19330 PF11575 FhuF 2Fe-2S C-terminal domain FYA08_RS19335 PF00196 Bacterial regulatory proteins, luxR family FYA08_RS19340 PF00196 Bacterial regulatory proteins, luxR family FYA08_RS19350 PF12821 Threonine/Serine exporter, ThrE FYA08_RS19355 PF17948 DnaT DNA-binding domain FYA08_RS19360 PF01695 IstB-like ATP binding protein FYA08_RS19365 PF10696 Protein of unknown function (DUF2501) FYA08_RS19370 PF00884 Sulfatase FYA08_RS19375 PF08240 Alcohol dehydrogenase GroES-like domain FYA08_RS19375 PF00107 Zinc-binding dehydrogenase FYA08_RS19380 PF00392 Bacterial regulatory proteins, gntR family FYA08_RS19380 PF07729 FCD domain FYA08_RS19385 PF07690 Major Facilitator Superfamily FYA08_RS19390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FYA08_RS19390 PF02203 Tar ligand binding domain homologue FYA08_RS19390 PF00672 HAMP domain FYA08_RS19395 PF02554 Carbon starvation protein CstA FYA08_RS19395 PF13722 5TM C-terminal transporter carbon starvation CstA FYA08_RS19400 PF04328 Selenoprotein, putative FYA08_RS19405 PF07683 Cobalamin synthesis protein cobW C-terminal domain FYA08_RS19405 PF02492 CobW/HypB/UreG, nucleotide-binding domain FYA08_RS19410 PF04471 Restriction endonuclease FYA08_RS19410 PF14338 Mrr N-terminal domain FYA08_RS19420 PF02384 N-6 DNA Methylase FYA08_RS19425 PF01420 Type I restriction modification DNA specificity domain FYA08_RS19430 PF08845 Toxin SymE, type I toxin-antitoxin system FYA08_RS19435 PF07728 AAA domain (dynein-related subfamily) FYA08_RS19435 PF12102 Domain of unknown function (DUF3578) FYA08_RS19440 PF10117 McrBC 5-methylcytosine restriction system component FYA08_RS19455 PF06568 Domain of unknown function (DUF1127) FYA08_RS19460 PF00392 Bacterial regulatory proteins, gntR family FYA08_RS19460 PF00155 Aminotransferase class I and II FYA08_RS19470 PF07690 Major Facilitator Superfamily FYA08_RS19475 PF04286 Protein of unknown function (DUF445) FYA08_RS19480 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component FYA08_RS19485 PF01869 BadF/BadG/BcrA/BcrD ATPase family FYA08_RS19495 PF06977 SdiA-regulated FYA08_RS19500 PF06779 Uncharacterised MFS-type transporter YbfB FYA08_RS19505 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family FYA08_RS19510 PF07670 Nucleoside recognition FYA08_RS19515 PF07670 Nucleoside recognition FYA08_RS19520 PF01979 Amidohydrolase family FYA08_RS19525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS19525 PF03466 LysR substrate binding domain FYA08_RS19530 PF04965 Gene 25-like lysozyme FYA08_RS19540 PF10887 Protein of unknown function (DUF2686) FYA08_RS19545 PF07729 FCD domain FYA08_RS19545 PF00392 Bacterial regulatory proteins, gntR family FYA08_RS19550 PF08125 Mannitol dehydrogenase C-terminal domain FYA08_RS19550 PF01232 Mannitol dehydrogenase Rossmann domain FYA08_RS19555 PF03786 D-mannonate dehydratase (UxuA) FYA08_RS19560 PF02447 GntP family permease FYA08_RS19565 PF09160 FimH, mannose binding FYA08_RS19565 PF00419 Fimbrial protein FYA08_RS19575 PF00419 Fimbrial protein FYA08_RS19580 PF13953 PapC C-terminal domain FYA08_RS19580 PF00577 Outer membrane usher protein FYA08_RS19580 PF13954 PapC N-terminal domain FYA08_RS19585 PF02753 Pili assembly chaperone PapD, C-terminal domain FYA08_RS19585 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FYA08_RS19590 PF00419 Fimbrial protein FYA08_RS19595 PF00419 Fimbrial protein FYA08_RS19600 PF00589 Phage integrase family FYA08_RS19610 PF00589 Phage integrase family FYA08_RS19615 PF06178 Oligogalacturonate-specific porin protein (KdgM) FYA08_RS19625 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase FYA08_RS19630 PF13091 PLD-like domain FYA08_RS19630 PF13087 AAA domain FYA08_RS19640 PF09857 Putative toxin of bacterial toxin-antitoxin pair FYA08_RS19645 PF00583 Acetyltransferase (GNAT) family FYA08_RS19650 PF13847 Methyltransferase domain FYA08_RS19660 PF05343 M42 glutamyl aminopeptidase FYA08_RS19665 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FYA08_RS19670 PF03611 PTS system sugar-specific permease component FYA08_RS19675 PF03437 BtpA family FYA08_RS19680 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FYA08_RS19685 PF00834 Ribulose-phosphate 3 epimerase family FYA08_RS19690 PF08220 DeoR-like helix-turn-helix domain FYA08_RS19690 PF00455 DeoR C terminal sensor domain FYA08_RS19695 PF01614 Bacterial transcriptional regulator FYA08_RS19700 PF00701 Dihydrodipicolinate synthetase family FYA08_RS19705 PF00920 Dehydratase family FYA08_RS19710 PF02447 GntP family permease FYA08_RS19715 PF04198 Putative sugar-binding domain FYA08_RS19725 PF04542 Sigma-70 region 2 FYA08_RS19725 PF08281 Sigma-70, region 4 FYA08_RS19730 PF04773 FecR protein FYA08_RS19730 PF16220 Domain of unknown function (DUF4880) FYA08_RS19735 PF00593 TonB dependent receptor FYA08_RS19735 PF07660 Secretin and TonB N terminus short domain FYA08_RS19735 PF07715 TonB-dependent Receptor Plug Domain FYA08_RS19740 PF01497 Periplasmic binding protein FYA08_RS19745 PF01032 FecCD transport family FYA08_RS19750 PF01032 FecCD transport family FYA08_RS19755 PF00005 ABC transporter FYA08_RS19775 PF13936 Helix-turn-helix domain FYA08_RS19775 PF00665 Integrase core domain FYA08_RS19790 PF16747 Surface-adhesin protein E FYA08_RS19800 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FYA08_RS19800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FYA08_RS19805 PF07690 Major Facilitator Superfamily FYA08_RS19810 PF01609 Transposase DDE domain FYA08_RS19810 PF13006 Insertion element 4 transposase N-terminal FYA08_RS19850 PF00107 Zinc-binding dehydrogenase FYA08_RS19850 PF08240 Alcohol dehydrogenase GroES-like domain FYA08_RS19855 PF01202 Shikimate kinase FYA08_RS19860 PF00107 Zinc-binding dehydrogenase FYA08_RS19860 PF08240 Alcohol dehydrogenase GroES-like domain FYA08_RS19865 PF00106 short chain dehydrogenase FYA08_RS19870 PF02447 GntP family permease FYA08_RS19875 PF00356 Bacterial regulatory proteins, lacI family FYA08_RS19880 PF05872 Bacterial protein of unknown function (DUF853) FYA08_RS19885 PF03739 Lipopolysaccharide export system permease LptF/LptG FYA08_RS19890 PF03739 Lipopolysaccharide export system permease LptF/LptG FYA08_RS19895 PF00883 Cytosol aminopeptidase family, catalytic domain FYA08_RS19895 PF02789 Cytosol aminopeptidase family, N-terminal domain FYA08_RS19900 PF04364 DNA polymerase III chi subunit, HolC FYA08_RS19905 PF00133 tRNA synthetases class I (I, L, M and V) FYA08_RS19905 PF10458 Valyl tRNA synthetase tRNA binding arm FYA08_RS19905 PF08264 Anticodon-binding domain of tRNA FYA08_RS19910 PF05987 Bacterial protein of unknown function (DUF898) FYA08_RS19915 PF00583 Acetyltransferase (GNAT) family FYA08_RS19920 PF06877 Regulator of ribonuclease activity B FYA08_RS19925 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FYA08_RS19925 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FYA08_RS19935 PF04074 YhcH/YjgK/YiaL FYA08_RS19940 PF00440 Bacterial regulatory proteins, tetR family FYA08_RS19950 PF01042 Endoribonuclease L-PSP FYA08_RS19955 PF08052 PyrBI operon leader peptide FYA08_RS19960 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FYA08_RS19960 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FYA08_RS19965 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain FYA08_RS19965 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain FYA08_RS19970 PF01042 Endoribonuclease L-PSP FYA08_RS19975 PF00690 Cation transporter/ATPase, N-terminus FYA08_RS19975 PF00689 Cation transporting ATPase, C-terminus FYA08_RS19980 PF17059 MgtA leader peptide FYA08_RS19985 PF00356 Bacterial regulatory proteins, lacI family FYA08_RS19990 PF00367 phosphotransferase system, EIIB FYA08_RS19990 PF02378 Phosphotransferase system, EIIC FYA08_RS19995 PF11941 Domain of unknown function (DUF3459) FYA08_RS19995 PF00128 Alpha amylase, catalytic domain FYA08_RS20000 PF03477 ATP cone domain FYA08_RS20000 PF13597 Anaerobic ribonucleoside-triphosphate reductase FYA08_RS20010 PF07361 Cytochrome b562 FYA08_RS20015 PF01523 Putative modulator of DNA gyrase FYA08_RS20020 PF04751 Protein of unknown function (DUF615) FYA08_RS20025 PF01225 Mur ligase family, catalytic domain FYA08_RS20025 PF02875 Mur ligase family, glutamate ligase domain FYA08_RS20025 PF08245 Mur ligase middle domain FYA08_RS20030 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FYA08_RS20035 PF02653 Branched-chain amino acid transport system / permease component FYA08_RS20040 PF02653 Branched-chain amino acid transport system / permease component FYA08_RS20045 PF00005 ABC transporter FYA08_RS20050 PF13407 Periplasmic binding protein domain FYA08_RS20055 PF00719 Inorganic pyrophosphatase FYA08_RS20060 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system FYA08_RS20065 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FYA08_RS20070 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like FYA08_RS20075 PF04357 TamB, inner membrane protein subunit of TAM complex FYA08_RS20080 PF17243 POTRA domain TamA domain 1 FYA08_RS20080 PF01103 Surface antigen FYA08_RS20080 PF07244 Surface antigen variable number repeat FYA08_RS20085 PF01625 Peptide methionine sulfoxide reductase FYA08_RS20090 PF01595 Cyclin M transmembrane N-terminal domain FYA08_RS20090 PF00571 CBS domain FYA08_RS20090 PF03471 Transporter associated domain FYA08_RS20095 PF06526 Protein of unknown function (DUF1107) FYA08_RS20100 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) FYA08_RS20110 PF00459 Inositol monophosphatase family FYA08_RS20115 PF00149 Calcineurin-like phosphoesterase FYA08_RS20115 PF02872 5'-nucleotidase, C-terminal domain FYA08_RS20120 PF01638 HxlR-like helix-turn-helix FYA08_RS20125 PF05368 NmrA-like family FYA08_RS20130 PF00892 EamA-like transporter family FYA08_RS20135 PF01814 Hemerythrin HHE cation binding domain FYA08_RS20135 PF04405 Domain of Unknown function (DUF542) FYA08_RS20140 PF00324 Amino acid permease FYA08_RS20145 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FYA08_RS20145 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FYA08_RS20150 PF08525 Opacity-associated protein A N-terminal motif FYA08_RS20150 PF04225 Opacity-associated protein A LysM-like domain FYA08_RS20160 PF10887 Protein of unknown function (DUF2686) FYA08_RS20165 PF03948 Ribosomal protein L9, C-terminal domain FYA08_RS20165 PF01281 Ribosomal protein L9, N-terminal domain FYA08_RS20170 PF01084 Ribosomal protein S18 FYA08_RS20175 PF00436 Single-strand binding protein family FYA08_RS20180 PF01250 Ribosomal protein S6 FYA08_RS20185 PF07338 Protein of unknown function (DUF1471) FYA08_RS20190 PF00596 Class II Aldolase and Adducin N-terminal domain FYA08_RS20195 PF01261 Xylose isomerase-like TIM barrel FYA08_RS20200 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FYA08_RS20205 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FYA08_RS20210 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FYA08_RS20215 PF03611 PTS system sugar-specific permease component FYA08_RS20225 PF08220 DeoR-like helix-turn-helix domain FYA08_RS20225 PF00455 DeoR C terminal sensor domain FYA08_RS20230 PF00326 Prolyl oligopeptidase family FYA08_RS20235 PF07338 Protein of unknown function (DUF1471) FYA08_RS20240 PF07338 Protein of unknown function (DUF1471) FYA08_RS20245 PF18158 Adaptive response protein AidB N-terminal domain FYA08_RS20245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FYA08_RS20245 PF02770 Acyl-CoA dehydrogenase, middle domain FYA08_RS20250 PF03738 Glutathionylspermidine synthase preATP-grasp FYA08_RS20255 PF06693 Protein of unknown function (DUF1190) FYA08_RS20260 PF03994 Domain of Unknown Function (DUF350) FYA08_RS20265 PF10679 Protein of unknown function (DUF2491) FYA08_RS20270 PF04012 PspA/IM30 family FYA08_RS20275 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) FYA08_RS20280 PF08032 RNA 2'-O ribose methyltransferase substrate binding FYA08_RS20280 PF00588 SpoU rRNA Methylase family FYA08_RS20285 PF08461 Ribonuclease R winged-helix domain FYA08_RS20285 PF08206 Ribonuclease B OB domain FYA08_RS20285 PF00575 S1 RNA binding domain FYA08_RS20285 PF00773 RNB domain FYA08_RS20285 PF17876 Cold shock domain FYA08_RS20290 PF02082 Transcriptional regulator FYA08_RS20295 PF00709 Adenylosuccinate synthetase FYA08_RS20300 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) FYA08_RS20305 PF01145 SPFH domain / Band 7 family FYA08_RS20310 PF01145 SPFH domain / Band 7 family FYA08_RS20310 PF12221 Bacterial membrane protein N terminal FYA08_RS20315 PF01926 50S ribosome-binding GTPase FYA08_RS20315 PF16360 GTP-binding GTPase Middle Region FYA08_RS20315 PF13167 GTP-binding GTPase N-terminal FYA08_RS20320 PF17209 Hfq protein FYA08_RS20330 PF01119 DNA mismatch repair protein, C-terminal domain FYA08_RS20330 PF08676 MutL C terminal dimerisation domain FYA08_RS20335 PF01520 N-acetylmuramoyl-L-alanine amidase FYA08_RS20340 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FYA08_RS20345 PF03853 YjeF-related protein N-terminus FYA08_RS20345 PF01256 Carbohydrate kinase FYA08_RS20350 PF08331 Domain of unknown function (DUF1730) FYA08_RS20375 PF00929 Exonuclease FYA08_RS20380 PF03193 RsgA GTPase FYA08_RS20385 PF02666 Phosphatidylserine decarboxylase FYA08_RS20390 PF00924 Mechanosensitive ion channel FYA08_RS20390 PF12795 Mechanosensitive ion channel porin domain FYA08_RS20390 PF12794 Mechanosensitive ion channel inner membrane domain 1 FYA08_RS20395 PF10840 Protein of unknown function (DUF2645) FYA08_RS20405 PF13520 Amino acid permease FYA08_RS20410 PF00152 tRNA synthetases class II (D, K and N) FYA08_RS20415 PF02910 Fumarate reductase flavoprotein C-term FYA08_RS20415 PF00890 FAD binding domain FYA08_RS20420 PF13085 2Fe-2S iron-sulfur cluster binding domain FYA08_RS20420 PF13183 4Fe-4S dicluster domain FYA08_RS20425 PF02300 Fumarate reductase subunit C FYA08_RS20430 PF02313 Fumarate reductase subunit D FYA08_RS20435 PF00144 Beta-lactamase FYA08_RS20440 PF08212 Lipocalin-like domain FYA08_RS20445 PF00893 Small Multidrug Resistance protein FYA08_RS20450 PF08085 Entericidin EcnA/B family FYA08_RS20455 PF08085 Entericidin EcnA/B family FYA08_RS20460 PF01132 Elongation factor P (EF-P) OB domain FYA08_RS20460 PF08207 Elongation factor P (EF-P) KOW-like domain FYA08_RS20460 PF09285 Elongation factor P, C-terminal FYA08_RS20465 PF04055 Radical SAM superfamily FYA08_RS20470 PF15922 YjeJ-like FYA08_RS20475 PF13698 Domain of unknown function (DUF4156) FYA08_RS20480 PF00118 TCP-1/cpn60 chaperonin family FYA08_RS20485 PF00166 Chaperonin 10 Kd subunit FYA08_RS20490 PF13520 Amino acid permease FYA08_RS20495 PF04186 FxsA cytoplasmic membrane protein FYA08_RS20500 PF10415 Fumarase C C-terminus FYA08_RS20500 PF00206 Lyase FYA08_RS20505 PF03605 Anaerobic c4-dicarboxylate membrane transporter FYA08_RS20510 PF03091 CutA1 divalent ion tolerance protein FYA08_RS20515 PF11412 Disulphide bond corrector protein DsbC FYA08_RS20515 PF02683 Cytochrome C biogenesis protein transmembrane region FYA08_RS20530 PF00486 Transcriptional regulatory protein, C terminal FYA08_RS20530 PF18500 CadC C-terminal domain 1 FYA08_RS20535 PF13520 Amino acid permease FYA08_RS20540 PF01276 Orn/Lys/Arg decarboxylase, major domain FYA08_RS20540 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FYA08_RS20540 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FYA08_RS20545 PF00854 POT family FYA08_RS20550 PF01336 OB-fold nucleic acid binding domain FYA08_RS20550 PF00152 tRNA synthetases class II (D, K and N) FYA08_RS20555 PF10753 Toxin GhoT_OrtT FYA08_RS20560 PF11080 Endoribonuclease GhoS FYA08_RS20565 PF14542 GCN5-related N-acetyl-transferase FYA08_RS20570 PF06902 Divergent 4Fe-4S mono-cluster FYA08_RS20575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS20575 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FYA08_RS20575 PF00989 PAS fold FYA08_RS20575 PF17203 Single cache domain 3 FYA08_RS20580 PF00072 Response regulator receiver domain FYA08_RS20585 PF03605 Anaerobic c4-dicarboxylate membrane transporter FYA08_RS20590 PF05681 Fumarate hydratase (Fumerase) FYA08_RS20590 PF05683 Fumarase C-terminus FYA08_RS20595 PF09997 Predicted membrane protein (DUF2238) FYA08_RS20605 PF11975 Family 4 glycosyl hydrolase C-terminal domain FYA08_RS20605 PF02056 Family 4 glycosyl hydrolase FYA08_RS20610 PF12833 Helix-turn-helix domain FYA08_RS20615 PF01276 Orn/Lys/Arg decarboxylase, major domain FYA08_RS20615 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FYA08_RS20615 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FYA08_RS20620 PF12833 Helix-turn-helix domain FYA08_RS20625 PF13520 Amino acid permease FYA08_RS20630 PF08019 Phosphoethanolamine transferase EptA/EptB FYA08_RS20630 PF00884 Sulfatase FYA08_RS20635 PF00486 Transcriptional regulatory protein, C terminal FYA08_RS20635 PF00072 Response regulator receiver domain FYA08_RS20640 PF00512 His Kinase A (phospho-acceptor) domain FYA08_RS20640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS20650 PF08946 Osmosensory transporter coiled coil FYA08_RS20650 PF00083 Sugar (and other) transporter FYA08_RS20655 PF13990 YjcZ-like protein FYA08_RS20660 PF00350 Dynamin family FYA08_RS20665 PF03831 PhnA domain FYA08_RS20665 PF08274 PhnA Zinc-Ribbon FYA08_RS20670 PF06983 3-demethylubiquinone-9 3-methyltransferase FYA08_RS20675 PF00005 ABC transporter FYA08_RS20690 PF07702 UTRA domain FYA08_RS20690 PF00392 Bacterial regulatory proteins, gntR family FYA08_RS20695 PF06754 Phosphonate metabolism protein PhnG FYA08_RS20700 PF05845 Bacterial phosphonate metabolism protein (PhnH) FYA08_RS20705 PF05861 Bacterial phosphonate metabolism protein (PhnI) FYA08_RS20710 PF06007 Phosphonate metabolism protein PhnJ FYA08_RS20715 PF00005 ABC transporter FYA08_RS20720 PF00005 ABC transporter FYA08_RS20725 PF07969 Amidohydrolase family FYA08_RS20735 PF00583 Acetyltransferase (GNAT) family FYA08_RS20740 PF12706 Beta-lactamase superfamily domain FYA08_RS20750 PF02502 Ribose/Galactose Isomerase FYA08_RS20755 PF01380 SIS domain FYA08_RS20755 PF01418 Helix-turn-helix domain, rpiR family FYA08_RS20760 PF13407 Periplasmic binding protein domain FYA08_RS20765 PF00005 ABC transporter FYA08_RS20770 PF02653 Branched-chain amino acid transport system / permease component FYA08_RS20775 PF00834 Ribulose-phosphate 3 epimerase family FYA08_RS20780 PF00480 ROK family FYA08_RS20785 PF14863 Alkyl sulfatase dimerisation FYA08_RS20785 PF00753 Metallo-beta-lactamase superfamily FYA08_RS20785 PF14864 Alkyl sulfatase C-terminal FYA08_RS20790 PF17090 Uncharacterised protein family FYA08_RS20795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FYA08_RS20795 PF00529 HlyD membrane-fusion protein of T1SS FYA08_RS20800 PF04632 Fusaric acid resistance protein family FYA08_RS20805 PF02321 Outer membrane efflux protein FYA08_RS20815 PF08238 Sel1 repeat FYA08_RS20820 PF00375 Sodium:dicarboxylate symporter family FYA08_RS20830 PF03918 Cytochrome C biogenesis protein FYA08_RS20835 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FYA08_RS20835 PF01578 Cytochrome C assembly protein FYA08_RS20840 PF03916 Polysulphide reductase, NrfD FYA08_RS20845 PF13247 4Fe-4S dicluster domain FYA08_RS20845 PF00037 4Fe-4S binding domain FYA08_RS20850 PF13435 Cytochrome c554 and c-prime FYA08_RS20850 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) FYA08_RS20855 PF02335 Cytochrome c552 FYA08_RS20860 PF16177 Acetyl-coenzyme A synthetase N-terminus FYA08_RS20860 PF00501 AMP-binding enzyme FYA08_RS20860 PF13193 AMP-binding enzyme C-terminal domain FYA08_RS20865 PF04341 Protein of unknown function, DUF485 FYA08_RS20870 PF00474 Sodium:solute symporter family FYA08_RS20875 PF00805 Pentapeptide repeats (8 copies) FYA08_RS20880 PF00999 Sodium/hydrogen exchanger family FYA08_RS20885 PF00860 Permease family FYA08_RS20890 PF09278 MerR, DNA binding FYA08_RS20890 PF00376 MerR family regulatory protein FYA08_RS20895 PF12833 Helix-turn-helix domain FYA08_RS20900 PF00563 EAL domain FYA08_RS20900 PF12792 CSS motif domain associated with EAL FYA08_RS20905 PF15940 Family of unknown function FYA08_RS20910 PF00436 Single-strand binding protein family FYA08_RS20915 PF17755 UvrA DNA-binding domain FYA08_RS20915 PF17760 UvrA interaction domain FYA08_RS20915 PF00005 ABC transporter FYA08_RS20920 PF04237 YjbR FYA08_RS20925 PF01894 Uncharacterised protein family UPF0047 FYA08_RS20930 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) FYA08_RS20940 PF00155 Aminotransferase class I and II FYA08_RS20945 PF01168 Alanine racemase, N-terminal domain FYA08_RS20945 PF00842 Alanine racemase, C-terminal domain FYA08_RS20950 PF03796 DnaB-like helicase C terminal domain FYA08_RS20950 PF00772 DnaB-like helicase N terminal domain FYA08_RS20955 PF08240 Alcohol dehydrogenase GroES-like domain FYA08_RS20955 PF00107 Zinc-binding dehydrogenase FYA08_RS20960 PF09583 Phage shock protein G (Phageshock_PspG) FYA08_RS20965 PF01207 Dihydrouridine synthase (Dus) FYA08_RS20970 PF10897 Protein of unknown function (DUF2713) FYA08_RS20980 PF01475 Ferric uptake regulator family FYA08_RS20985 PF05532 CsbD-like FYA08_RS20990 PF01554 MatE FYA08_RS20995 PF01726 LexA DNA binding domain FYA08_RS20995 PF00717 Peptidase S24-like FYA08_RS21000 PF01219 Prokaryotic diacylglycerol kinase FYA08_RS21005 PF01553 Acyltransferase FYA08_RS21010 PF01040 UbiA prenyltransferase family FYA08_RS21015 PF04345 Chorismate lyase FYA08_RS21025 PF07148 Maltose operon periplasmic protein precursor (MalM) FYA08_RS21030 PF02264 LamB porin FYA08_RS21035 PF17912 MalK OB fold domain FYA08_RS21035 PF00005 ABC transporter FYA08_RS21040 PF01547 Bacterial extracellular solute-binding protein FYA08_RS21045 PF14785 Maltose transport system permease protein MalF P2 domain FYA08_RS21045 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS21050 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS21055 PF00083 Sugar (and other) transporter FYA08_RS21060 PF06146 Phosphate-starvation-inducible E FYA08_RS21065 PF17089 Uncharacterised protein family FYA08_RS21070 PF06082 Exopolysaccharide biosynthesis protein YbjH FYA08_RS21075 PF06251 Capsule biosynthesis GfcC FYA08_RS21080 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF FYA08_RS21085 PF11106 Exopolysaccharide production protein YjbE FYA08_RS21090 PF00342 Phosphoglucose isomerase FYA08_RS21095 PF01842 ACT domain FYA08_RS21095 PF00696 Amino acid kinase family FYA08_RS21100 PF11656 YjbD family (DUF3811) FYA08_RS21105 PF01479 S4 domain FYA08_RS21105 PF00849 RNA pseudouridylate synthase FYA08_RS21110 PF03575 Peptidase family S51 FYA08_RS21115 PF02690 Na+/Pi-cotransporter FYA08_RS21120 PF02574 Homocysteine S-methyltransferase FYA08_RS21120 PF00809 Pterin binding enzyme FYA08_RS21120 PF02965 Vitamin B12 dependent methionine synthase, activation domain FYA08_RS21120 PF02607 B12 binding domain FYA08_RS21120 PF02310 B12 binding domain FYA08_RS21125 PF01614 Bacterial transcriptional regulator FYA08_RS21125 PF09339 IclR helix-turn-helix domain FYA08_RS21130 PF07906 ShET2 enterotoxin, N-terminal region FYA08_RS21135 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) FYA08_RS21140 PF00463 Isocitrate lyase family FYA08_RS21145 PF01274 Malate synthase FYA08_RS21150 PF04204 Homoserine O-succinyltransferase FYA08_RS21155 PF13673 Acetyltransferase (GNAT) domain FYA08_RS21185 PF01177 Asp/Glu/Hydantoin racemase FYA08_RS21190 PF07715 TonB-dependent Receptor Plug Domain FYA08_RS21190 PF00593 TonB dependent receptor FYA08_RS21195 PF05958 tRNA (Uracil-5-)-methyltransferase FYA08_RS21200 PF07226 Protein of unknown function (DUF1422) FYA08_RS21205 PF00440 Bacterial regulatory proteins, tetR family FYA08_RS21210 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FYA08_RS21210 PF07992 Pyridine nucleotide-disulphide oxidoreductase FYA08_RS21215 PF03466 LysR substrate binding domain FYA08_RS21215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS21220 PF00206 Lyase FYA08_RS21220 PF14698 Argininosuccinate lyase C-terminal FYA08_RS21225 PF00696 Amino acid kinase family FYA08_RS21230 PF01118 Semialdehyde dehydrogenase, NAD binding domain FYA08_RS21230 PF02774 Semialdehyde dehydrogenase, dimerisation domain FYA08_RS21235 PF07687 Peptidase dimerisation domain FYA08_RS21235 PF01546 Peptidase family M20/M25/M40 FYA08_RS21240 PF00311 Phosphoenolpyruvate carboxylase FYA08_RS21245 PF00884 Sulfatase FYA08_RS21250 PF12833 Helix-turn-helix domain FYA08_RS21255 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FYA08_RS21260 PF04055 Radical SAM superfamily FYA08_RS21265 PF01228 Glycine radical FYA08_RS21265 PF02901 Pyruvate formate lyase-like FYA08_RS21270 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FYA08_RS21280 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FYA08_RS21280 PF00381 PTS HPr component phosphorylation site FYA08_RS21280 PF00391 PEP-utilising enzyme, mobile domain FYA08_RS21280 PF02896 PEP-utilising enzyme, TIM barrel domain FYA08_RS21280 PF05524 PEP-utilising enzyme, N-terminal FYA08_RS21285 PF00923 Transaldolase/Fructose-6-phosphate aldolase FYA08_RS21290 PF00465 Iron-containing alcohol dehydrogenase FYA08_RS21295 PF06940 Domain of unknown function (DUF1287) FYA08_RS21300 PF00892 EamA-like transporter family FYA08_RS21305 PF00141 Peroxidase FYA08_RS21310 PF02219 Methylenetetrahydrofolate reductase FYA08_RS21315 PF00696 Amino acid kinase family FYA08_RS21315 PF00742 Homoserine dehydrogenase FYA08_RS21315 PF03447 Homoserine dehydrogenase, NAD binding domain FYA08_RS21320 PF01053 Cys/Met metabolism PLP-dependent enzyme FYA08_RS21325 PF01340 Met Apo-repressor, MetJ FYA08_RS21330 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family FYA08_RS21335 PF01197 Ribosomal protein L31 FYA08_RS21340 PF17764 3′ DNA-binding domain (3′BD) FYA08_RS21340 PF00271 Helicase conserved C-terminal domain FYA08_RS21340 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FYA08_RS21340 PF00270 DEAD/DEAH box helicase FYA08_RS21340 PF18074 Primosomal protein N C-terminal domain FYA08_RS21345 PF00356 Bacterial regulatory proteins, lacI family FYA08_RS21350 PF05036 Sporulation related domain FYA08_RS21355 PF00227 Proteasome subunit FYA08_RS21360 PF10431 C-terminal, D2-small domain, of ClpB protein FYA08_RS21360 PF07724 AAA domain (Cdc48 subfamily) FYA08_RS21360 PF00004 ATPase family associated with various cellular activities (AAA) FYA08_RS21365 PF01040 UbiA prenyltransferase family FYA08_RS21370 PF03737 Aldolase/RraA FYA08_RS21375 PF06005 Cell division protein ZapB FYA08_RS21380 PF00230 Major intrinsic protein FYA08_RS21385 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FYA08_RS21385 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FYA08_RS21390 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded FYA08_RS21395 PF00970 Oxidoreductase FAD-binding domain FYA08_RS21395 PF00175 Oxidoreductase NAD-binding domain FYA08_RS21400 PF00582 Universal stress protein family FYA08_RS21405 PF04175 Protein of unknown function (DUF406) FYA08_RS21410 PF05656 Protein of unknown function (DUF805) FYA08_RS21415 PF07305 Protein of unknown function (DUF1454) FYA08_RS21420 PF00121 Triosephosphate isomerase FYA08_RS21425 PF02611 CDP-diacylglycerol pyrophosphatase FYA08_RS21435 PF00365 Phosphofructokinase FYA08_RS21440 PF01545 Cation efflux family FYA08_RS21440 PF16916 Dimerisation domain of Zinc Transporter FYA08_RS21445 PF07813 LTXXQ motif family protein FYA08_RS21450 PF00072 Response regulator receiver domain FYA08_RS21450 PF00486 Transcriptional regulatory protein, C terminal FYA08_RS21455 PF00672 HAMP domain FYA08_RS21455 PF16527 Two-component sensor protein CpxA, periplasmic domain FYA08_RS21455 PF00512 His Kinase A (phospho-acceptor) domain FYA08_RS21455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS21460 PF03475 3-alpha domain FYA08_RS21460 PF03473 MOSC domain FYA08_RS21465 PF03812 2-keto-3-deoxygluconate permease FYA08_RS21470 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FYA08_RS21470 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FYA08_RS21475 PF06379 L-rhamnose-proton symport protein (RhaT) FYA08_RS21480 PF12833 Helix-turn-helix domain FYA08_RS21480 PF02311 AraC-like ligand binding domain FYA08_RS21485 PF02311 AraC-like ligand binding domain FYA08_RS21485 PF12833 Helix-turn-helix domain FYA08_RS21490 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FYA08_RS21490 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FYA08_RS21495 PF06134 L-rhamnose isomerase (RhaA) FYA08_RS21500 PF00596 Class II Aldolase and Adducin N-terminal domain FYA08_RS21505 PF05336 L-rhamnose mutarotase FYA08_RS21510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FYA08_RS21515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FYA08_RS21515 PF02378 Phosphotransferase system, EIIC FYA08_RS21520 PF05343 M42 glutamyl aminopeptidase FYA08_RS21525 PF08279 HTH domain FYA08_RS21525 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FYA08_RS21530 PF12889 Protein of unknown function (DUF3829) FYA08_RS21535 PF02634 FdhD/NarQ family FYA08_RS21545 PF13247 4Fe-4S dicluster domain FYA08_RS21545 PF09163 Formate dehydrogenase N, transmembrane FYA08_RS21550 PF01292 Prokaryotic cytochrome b561 FYA08_RS21555 PF04216 Protein involved in formate dehydrogenase formation FYA08_RS21565 PF01402 Ribbon-helix-helix protein, copG family FYA08_RS21570 PF00583 Acetyltransferase (GNAT) family FYA08_RS21570 PF09500 Putative thioesterase (yiiD_Cterm) FYA08_RS21575 PF02580 D-Tyr-tRNA(Tyr) deacylase FYA08_RS21580 PF03631 Virulence factor BrkB FYA08_RS21585 PF13419 Haloacid dehalogenase-like hydrolase FYA08_RS21590 PF00455 DeoR C terminal sensor domain FYA08_RS21590 PF08220 DeoR-like helix-turn-helix domain FYA08_RS21595 PF00294 pfkB family carbohydrate kinase FYA08_RS21600 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FYA08_RS21600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FYA08_RS21605 PF01791 DeoC/LacD family aldolase FYA08_RS21615 PF01263 Aldose 1-epimerase FYA08_RS21620 PF01055 Glycosyl hydrolases family 31 FYA08_RS21635 PF06178 Oligogalacturonate-specific porin protein (KdgM) FYA08_RS21640 PF07690 Major Facilitator Superfamily FYA08_RS21645 PF01261 Xylose isomerase-like TIM barrel FYA08_RS21650 PF00392 Bacterial regulatory proteins, gntR family FYA08_RS21650 PF07702 UTRA domain FYA08_RS21655 PF03144 Elongation factor Tu domain 2 FYA08_RS21655 PF00679 Elongation factor G C-terminus FYA08_RS21655 PF00009 Elongation factor Tu GTP binding domain FYA08_RS21660 PF03951 Glutamine synthetase, beta-Grasp domain FYA08_RS21660 PF00120 Glutamine synthetase, catalytic domain FYA08_RS21665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FYA08_RS21665 PF00512 His Kinase A (phospho-acceptor) domain FYA08_RS21665 PF00989 PAS fold FYA08_RS21670 PF00158 Sigma-54 interaction domain FYA08_RS21670 PF00072 Response regulator receiver domain FYA08_RS21670 PF02954 Bacterial regulatory protein, Fis family FYA08_RS21680 PF04055 Radical SAM superfamily FYA08_RS21680 PF06969 HemN C-terminal domain FYA08_RS21685 PF04220 Der GTPase activator (YihI) FYA08_RS21690 PF01926 50S ribosome-binding GTPase FYA08_RS21695 PF01612 3'-5' exonuclease FYA08_RS21695 PF00476 DNA polymerase family A FYA08_RS21695 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FYA08_RS21695 PF01367 5'-3' exonuclease, C-terminal SAM fold FYA08_RS21705 PF01553 Acyltransferase FYA08_RS21710 PF06097 Bacterial protein of unknown function (DUF945) FYA08_RS21715 PF01323 DSBA-like thioredoxin domain FYA08_RS21720 PF01636 Phosphotransferase enzyme family FYA08_RS21725 PF06288 Protein of unknown function (DUF1040) FYA08_RS21730 PF12804 MobA-like NTP transferase domain FYA08_RS21735 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FYA08_RS21770 PF12724 Flavodoxin domain FYA08_RS21775 PF02386 Cation transport protein FYA08_RS21780 PF01205 Uncharacterized protein family UPF0029 FYA08_RS21780 PF09186 Domain of unknown function (DUF1949) FYA08_RS21785 PF00557 Metallopeptidase family M24 FYA08_RS21790 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FYA08_RS21790 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FYA08_RS21790 PF00378 Enoyl-CoA hydratase/isomerase FYA08_RS21795 PF02803 Thiolase, C-terminal domain FYA08_RS21795 PF00108 Thiolase, N-terminal domain FYA08_RS21800 PF00175 Oxidoreductase NAD-binding domain FYA08_RS21800 PF00970 Oxidoreductase FAD-binding domain FYA08_RS21805 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FYA08_RS21810 PF02357 Transcription termination factor nusG FYA08_RS21815 PF01026 TatD related DNase FYA08_RS21820 PF00902 Sec-independent protein translocase protein (TatC) FYA08_RS21830 PF02416 mttA/Hcf106 family FYA08_RS21835 PF03109 ABC1 family FYA08_RS21840 PF02036 SCP-2 sterol transfer family FYA08_RS21845 PF01209 ubiE/COQ5 methyltransferase family FYA08_RS21850 PF02646 RmuC family FYA08_RS21855 PF01048 Phosphorylase superfamily FYA08_RS21860 PF01738 Dienelactone hydrolase family FYA08_RS21865 PF01717 Cobalamin-independent synthase, Catalytic domain FYA08_RS21865 PF08267 Cobalamin-independent synthase, N-terminal domain FYA08_RS21870 PF03466 LysR substrate binding domain FYA08_RS21870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS21875 PF00892 EamA-like transporter family FYA08_RS21885 PF12146 Serine aminopeptidase, S33 FYA08_RS21890 PF01810 LysE type translocator FYA08_RS21895 PF01810 LysE type translocator FYA08_RS21900 PF16124 RecQ zinc-binding FYA08_RS21900 PF00271 Helicase conserved C-terminal domain FYA08_RS21900 PF09382 RQC domain FYA08_RS21900 PF00570 HRDC domain FYA08_RS21900 PF00270 DEAD/DEAH box helicase FYA08_RS21905 PF02253 Phospholipase A1 FYA08_RS21910 PF03061 Thioesterase superfamily FYA08_RS21915 PF00892 EamA-like transporter family FYA08_RS21925 PF10947 Protein of unknown function (DUF2628) FYA08_RS21930 PF01544 CorA-like Mg2+ transporter protein FYA08_RS21935 PF09992 Phosphodiester glycosidase FYA08_RS21940 PF13361 UvrD-like helicase C-terminal domain FYA08_RS21940 PF00580 UvrD/REP helicase N-terminal domain FYA08_RS21945 PF13419 Haloacid dehalogenase-like hydrolase FYA08_RS21950 PF02899 Phage integrase, N-terminal SAM-like domain FYA08_RS21950 PF00589 Phage integrase family FYA08_RS21955 PF04340 Protein of unknown function, DUF484 FYA08_RS21960 PF01678 Diaminopimelate epimerase FYA08_RS21965 PF13627 Prokaryotic lipoprotein-attachment site FYA08_RS21975 PF01491 Frataxin-like domain FYA08_RS21980 PF01295 Adenylate cyclase, class-I FYA08_RS21980 PF12633 Adenylate cyclase NT domain FYA08_RS21985 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FYA08_RS21985 PF03900 Porphobilinogen deaminase, C-terminal domain FYA08_RS21990 PF02602 Uroporphyrinogen-III synthase HemD FYA08_RS21995 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase FYA08_RS22000 PF07219 HemY protein N-terminus FYA08_RS22000 PF07719 Tetratricopeptide repeat FYA08_RS22005 PF00884 Sulfatase FYA08_RS22010 PF04055 Radical SAM superfamily FYA08_RS22010 PF13186 Iron-sulfur cluster-binding domain FYA08_RS22035 PF00324 Amino acid permease FYA08_RS22040 PF03808 Glycosyl transferase WecB/TagA/CpsF family FYA08_RS22045 PF06899 WzyE protein, O-antigen assembly polymerase FYA08_RS22050 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 FYA08_RS22055 PF01943 Polysaccharide biosynthesis protein FYA08_RS22060 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FYA08_RS22070 PF00483 Nucleotidyl transferase FYA08_RS22075 PF16363 GDP-mannose 4,6 dehydratase FYA08_RS22080 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FYA08_RS22080 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FYA08_RS22080 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FYA08_RS22085 PF02350 UDP-N-acetylglucosamine 2-epimerase FYA08_RS22090 PF02706 Chain length determinant protein FYA08_RS22095 PF00953 Glycosyl transferase family 4 FYA08_RS22100 PF07498 Rho termination factor, N-terminal domain FYA08_RS22100 PF07497 Rho termination factor, RNA-binding domain FYA08_RS22100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FYA08_RS22110 PF00085 Thioredoxin FYA08_RS22115 PF00271 Helicase conserved C-terminal domain FYA08_RS22115 PF00270 DEAD/DEAH box helicase FYA08_RS22120 PF02541 Ppx/GppA phosphatase family FYA08_RS22125 PF13361 UvrD-like helicase C-terminal domain FYA08_RS22125 PF00580 UvrD/REP helicase N-terminal domain FYA08_RS22140 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FYA08_RS22140 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FYA08_RS22145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS22145 PF03466 LysR substrate binding domain FYA08_RS22150 PF00291 Pyridoxal-phosphate dependent enzyme FYA08_RS22150 PF00585 C-terminal regulatory domain of Threonine dehydratase FYA08_RS22155 PF00920 Dehydratase family FYA08_RS22160 PF01063 Amino-transferase class IV FYA08_RS22180 PF08046 IlvGEDA operon leader peptide FYA08_RS22185 PF13335 Magnesium chelatase, subunit ChlI C-terminal FYA08_RS22185 PF01078 Magnesium chelatase, subunit ChlI FYA08_RS22190 PF04219 Protein of unknown function, DUF FYA08_RS22195 PF03466 LysR substrate binding domain FYA08_RS22195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS22230 PF07729 FCD domain FYA08_RS22230 PF00392 Bacterial regulatory proteins, gntR family FYA08_RS22235 PF07690 Major Facilitator Superfamily FYA08_RS22240 PF00356 Bacterial regulatory proteins, lacI family FYA08_RS22245 PF00294 pfkB family carbohydrate kinase FYA08_RS22250 PF13407 Periplasmic binding protein domain FYA08_RS22255 PF02653 Branched-chain amino acid transport system / permease component FYA08_RS22260 PF00005 ABC transporter FYA08_RS22265 PF05025 RbsD / FucU transport protein family FYA08_RS22270 PF02705 K+ potassium transporter FYA08_RS22275 PF07728 AAA domain (dynein-related subfamily) FYA08_RS22275 PF12592 Protein of unknown function (DUF3763) FYA08_RS22275 PF17868 AAA lid domain FYA08_RS22280 PF05762 VWA domain containing CoxE-like protein FYA08_RS22285 PF03590 Aspartate-ammonia ligase FYA08_RS22290 PF01037 Lrp/AsnC ligand binding domain FYA08_RS22295 PF00258 Flavodoxin FYA08_RS22300 PF13932 GidA associated domain FYA08_RS22300 PF01134 Glucose inhibited division protein A FYA08_RS22305 PF02527 rRNA small subunit methyltransferase G FYA08_RS22310 PF03899 ATP synthase I chain FYA08_RS22315 PF00119 ATP synthase A chain FYA08_RS22320 PF00137 ATP synthase subunit C FYA08_RS22325 PF00430 ATP synthase B/B' CF(0) FYA08_RS22330 PF00213 ATP synthase delta (OSCP) subunit FYA08_RS22335 PF00306 ATP synthase alpha/beta chain, C terminal domain FYA08_RS22335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FYA08_RS22335 PF02874 ATP synthase alpha/beta family, beta-barrel domain FYA08_RS22340 PF00231 ATP synthase FYA08_RS22345 PF02874 ATP synthase alpha/beta family, beta-barrel domain FYA08_RS22345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FYA08_RS22350 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FYA08_RS22350 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FYA08_RS22355 PF00132 Bacterial transferase hexapeptide (six repeats) FYA08_RS22355 PF12804 MobA-like NTP transferase domain FYA08_RS22355 PF14602 Hexapeptide repeat of succinyl-transferase FYA08_RS22360 PF01380 SIS domain FYA08_RS22365 PF12849 PBP superfamily domain FYA08_RS22370 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS22375 PF00528 Binding-protein-dependent transport system inner membrane component FYA08_RS22380 PF00005 ABC transporter FYA08_RS22385 PF01895 PhoU domain FYA08_RS22390 PF03123 CAT RNA binding domain FYA08_RS22390 PF00874 PRD domain FYA08_RS22395 PF02378 Phosphotransferase system, EIIC FYA08_RS22395 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FYA08_RS22395 PF00367 phosphotransferase system, EIIB FYA08_RS22400 PF00232 Glycosyl hydrolase family 1 FYA08_RS22405 PF11471 Maltoporin periplasmic N-terminal extension FYA08_RS22405 PF02264 LamB porin FYA08_RS22410 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FYA08_RS22410 PF00756 Putative esterase FYA08_RS22415 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FYA08_RS22420 PF03691 Uncharacterised protein family (UPF0167) FYA08_RS22430 PF13419 Haloacid dehalogenase-like hydrolase FYA08_RS22435 PF00860 Permease family FYA08_RS22440 PF03358 NADPH-dependent FMN reductase FYA08_RS22450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FYA08_RS22450 PF03466 LysR substrate binding domain FYA08_RS22455 PF07690 Major Facilitator Superfamily FYA08_RS22460 PF03222 Tryptophan/tyrosine permease family FYA08_RS22465 PF01212 Beta-eliminating lyase FYA08_RS22470 PF08053 Tryptophanase operon leader peptide FYA08_RS22475 PF12631 MnmE helical domain FYA08_RS22475 PF10396 GTP-binding protein TrmE N-terminus FYA08_RS22475 PF01926 50S ribosome-binding GTPase FYA08_RS22480 PF02096 60Kd inner membrane protein FYA08_RS22480 PF14849 YidC periplasmic domain FYA08_RS22485 PF01809 Putative membrane protein insertion efficiency factor FYA08_RS22490 PF00825 Ribonuclease P FYA08_RS22495 PF00468 Ribosomal protein L34 FYA08_RS22505 PF02387 IncFII RepA protein family FYA08_RS22520 PF01848 Hok/gef family FYA08_RS22535 PF07015 VirC1 protein FYA08_RS22550 PF00226 DnaJ domain FYA08_RS22550 PF01556 DnaJ C terminal domain FYA08_RS22550 PF00684 DnaJ central domain FYA08_RS22645 PF05321 Haemolysin expression modulating protein FYA08_RS22660 PF01131 DNA topoisomerase FYA08_RS22660 PF01751 Toprim domain FYA08_RS22675 PF00565 Staphylococcal nuclease homologue FYA08_RS22685 PF00589 Phage integrase family FYA08_RS22690 PF04917 Bacterial shufflon protein, N-terminal constant region FYA08_RS22705 PF00144 Beta-lactamase FYA08_RS22710 PF08212 Lipocalin-like domain FYA08_RS22715 PF00893 Small Multidrug Resistance protein FYA08_RS22720 PF00196 Bacterial regulatory proteins, luxR family FYA08_RS22735 PF04917 Bacterial shufflon protein, N-terminal constant region FYA08_RS22740 PF04917 Bacterial shufflon protein, N-terminal constant region FYA08_RS22745 PF04917 Bacterial shufflon protein, N-terminal constant region FYA08_RS22750 PF04917 Bacterial shufflon protein, N-terminal constant region FYA08_RS22775 PF00437 Type II/IV secretion system protein FYA08_RS22795 PF00664 ABC transporter transmembrane region FYA08_RS22795 PF00005 ABC transporter FYA08_RS22795 PF03412 Peptidase C39 family FYA08_RS22800 PF02534 Type IV secretory system Conjugative DNA transfer FYA08_RS22805 PF00437 Type II/IV secretion system protein FYA08_RS22810 PF03743 Bacterial conjugation TrbI-like protein FYA08_RS22830 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FYA08_RS22870 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FYA08_RS22935 PF01145 SPFH domain / Band 7 family FYA08_RS22935 PF16200 C-terminal region of band_7