locus-tag	class	description
FYA20_RS00010	COG1396	sequence-specific DNA binding
FYA20_RS00015	COG4106	trans-aconitate 2-methyltransferase activity
FYA20_RS00020	COG3781	membrane
FYA20_RS00030	COG2199	diguanylate cyclase activity
FYA20_RS00040	COG2066	Belongs to the glutaminase family
FYA20_RS00045	COG1012	belongs to the aldehyde dehydrogenase family
FYA20_RS00050	COG0583	DNA-binding transcription factor activity
FYA20_RS00070	COG1846	Transcriptional regulator
FYA20_RS00075	COG4977	sequence-specific DNA binding
FYA20_RS00085	COG2723	6-phospho-beta-galactosidase activity
FYA20_RS00095	COG1447	Phosphotransferase system cellobiose-specific component IIA
FYA20_RS00100	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FYA20_RS00110	COG2188	Transcriptional regulator
FYA20_RS00115	COG0697	spore germination
FYA20_RS00120	COG2814	Major facilitator Superfamily
FYA20_RS00130	COG3706	GGDEF domain
FYA20_RS00135	COG3111	PFAM Bacterial OB fold (BOF) protein
FYA20_RS00140	COG0339	signal peptide processing
FYA20_RS00145	COG4221	oxidoreductase activity
FYA20_RS00150	COG1802	Transcriptional regulator
FYA20_RS00160	COG0246	Mannitol dehydrogenase
FYA20_RS00165	COG0477	Major facilitator Superfamily
FYA20_RS00170	COG1063	alcohol dehydrogenase
FYA20_RS00175	COG4948	Mandelate Racemase Muconate Lactonizing
FYA20_RS00190	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FYA20_RS00205	COG0243	molybdopterin cofactor binding
FYA20_RS00210	COG0243	molybdopterin cofactor binding
FYA20_RS00215	COG0437	4 iron, 4 sulfur cluster binding
FYA20_RS00220	COG3302	dmso reductase anchor subunit
FYA20_RS00225	COG3381	protein complex oligomerization
FYA20_RS00235	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FYA20_RS00240	COG1940	carbohydrate kinase activity
FYA20_RS00245	COG0583	DNA-binding transcription factor activity
FYA20_RS00250	COG2814	Major facilitator Superfamily
FYA20_RS00265	COG3591	Belongs to the peptidase S1B family
FYA20_RS00285	COG0628	permease
FYA20_RS00290	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
FYA20_RS00295	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
FYA20_RS00305	COG0531	amino acid
FYA20_RS00315	COG3136	membrane protein required for alginate biosynthesis
FYA20_RS00320	COG0745	RESPONSE REGULATOR receiver
FYA20_RS00325	COG2205	protein histidine kinase activity
FYA20_RS00335	COG0114	fumarate hydratase activity
FYA20_RS00340	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
FYA20_RS00340	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
FYA20_RS00345	COG1482	cell wall glycoprotein biosynthetic process
FYA20_RS00350	COG5339	Protein conserved in bacteria
FYA20_RS00365	COG3250	beta-galactosidase activity
FYA20_RS00370	COG1309	transcriptional regulator
FYA20_RS00375	COG1028	Short-chain dehydrogenase reductase Sdr
FYA20_RS00380	COG1609	Transcriptional regulator
FYA20_RS00385	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYA20_RS00385	COG1263	PTS System
FYA20_RS00390	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FYA20_RS00400	COG0673	inositol 2-dehydrogenase activity
FYA20_RS00435	COG4658	electron transport chain
FYA20_RS00440	COG4659	FMN binding
FYA20_RS00450	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FYA20_RS00455	COG3104	oligopeptide transport
FYA20_RS00460	COG0625	glutathione transferase activity
FYA20_RS00465	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
FYA20_RS00480	COG3895	Periplasmic Protein
FYA20_RS00490	COG3133	Outer membrane lipoprotein
FYA20_RS00505	COG1566	PFAM secretion protein HlyD family protein
FYA20_RS00510	COG1289	transmembrane transporter activity
FYA20_RS00515	COG2032	superoxide dismutase activity
FYA20_RS00520	COG4989	oxidoreductase activity
FYA20_RS00525	COG3313	Fe-S protein
FYA20_RS00530	COG1309	transcriptional regulator
FYA20_RS00535	COG1902	pentaerythritol trinitrate reductase activity
FYA20_RS00540	COG0346	lactoylglutathione lyase activity
FYA20_RS00550	COG1201	RNA secondary structure unwinding
FYA20_RS00560	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FYA20_RS00565	COG0791	NLP P60 protein
FYA20_RS00570	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FYA20_RS00575	COG2814	Major facilitator Superfamily
FYA20_RS00590	COG0583	DNA-binding transcription factor activity
FYA20_RS00595	COG2814	Major facilitator Superfamily
FYA20_RS00600	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FYA20_RS00605	COG0307	riboflavin synthase, alpha
FYA20_RS00615	COG3468	outer membrane autotransporter barrel domain protein
FYA20_RS00635	COG4529	Protein conserved in bacteria
FYA20_RS00645	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
FYA20_RS00650	COG0437	4 iron, 4 sulfur cluster binding
FYA20_RS00660	COG2414	aldehyde ferredoxin oxidoreductase
FYA20_RS00665	COG0437	4 iron, 4 sulfur cluster binding
FYA20_RS00675	COG0469	pyruvate kinase activity
FYA20_RS00680	COG4238	major outer membrane lipoprotein
FYA20_RS00685	COG1376	ErfK ybiS ycfS ynhG family protein
FYA20_RS00700	COG0719	Fe-S assembly protein
FYA20_RS00705	COG0396	ATPase activity
FYA20_RS00710	COG0719	Fe-S assembly protein
FYA20_RS00715	COG0316	Belongs to the HesB IscA family
FYA20_RS00725	COG2050	protein possibly involved in aromatic compounds catabolism
FYA20_RS00730	COG0247	lactate metabolic process
FYA20_RS00730	COG0277	FAD linked oxidase domain protein
FYA20_RS00735	COG0628	permease
FYA20_RS00750	COG0738	Major facilitator superfamily
FYA20_RS00755	COG2271	Major facilitator Superfamily
FYA20_RS00770	COG4670	ketone body catabolic process
FYA20_RS00775	COG1960	acyl-CoA dehydrogenase activity
FYA20_RS00780	COG1917	Cupin 2, conserved barrel domain protein
FYA20_RS00780	COG2207	Transcriptional regulator
FYA20_RS00785	COG2086	electron transfer activity
FYA20_RS00790	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
FYA20_RS00795	COG0644	oxidoreductase
FYA20_RS00800	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
FYA20_RS00805	COG0318	PFAM AMP-dependent synthetase and ligase
FYA20_RS00810	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FYA20_RS00810	COG0574	Belongs to the PEP-utilizing enzyme family
FYA20_RS00820	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FYA20_RS00825	COG4256	Hemin uptake protein
FYA20_RS00835	COG2200	EAL domain
FYA20_RS00840	COG0791	NLP P60 protein
FYA20_RS00850	COG0386	Belongs to the glutathione peroxidase family
FYA20_RS00910	COG3137	Salt-induced outer membrane protein
FYA20_RS00925	COG1447	Phosphotransferase system cellobiose-specific component IIA
FYA20_RS00930	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FYA20_RS00935	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FYA20_RS00940	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FYA20_RS00950	COG0322	excinuclease ABC activity
FYA20_RS00960	COG3678	ATP-independent chaperone mediated protein folding
FYA20_RS00990	COG0708	Exodeoxyribonuclease III
FYA20_RS00995	COG0398	Pfam SNARE associated Golgi protein
FYA20_RS01005	COG0398	Pfam SNARE associated Golgi protein
FYA20_RS01010	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYA20_RS01015	COG4134	Bacterial extracellular solute-binding protein
FYA20_RS01020	COG4135	transport system, permease component
FYA20_RS01025	COG4136	ATPase activity
FYA20_RS01030	COG2897	thiosulfate sulfurtransferase activity
FYA20_RS01035	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FYA20_RS01040	COG0494	nUDIX hydrolase
FYA20_RS01050	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FYA20_RS01055	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FYA20_RS01060	COG0709	Synthesizes selenophosphate from selenide and ATP
FYA20_RS01065	COG0778	Nitroreductase
FYA20_RS01070	COG0616	signal peptide processing
FYA20_RS01075	COG0252	asparaginase activity
FYA20_RS01080	COG1335	isochorismatase
FYA20_RS01085	COG2814	Major facilitator Superfamily
FYA20_RS01090	COG1349	DNA-binding transcription factor activity
FYA20_RS01095	COG0667	Aldo Keto reductase
FYA20_RS01100	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYA20_RS01105	COG0191	fructose-bisphosphate aldolase activity
FYA20_RS01110	COG1063	alcohol dehydrogenase
FYA20_RS01115	COG2271	Major facilitator Superfamily
FYA20_RS01120	COG1063	alcohol dehydrogenase
FYA20_RS01125	COG3139	Protein of unknown function (DUF1315)
FYA20_RS01135	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FYA20_RS01140	COG0676	glucose-6-phosphate 1-epimerase activity
FYA20_RS01145	COG0656	L-ascorbic acid biosynthetic process
FYA20_RS01150	COG3713	MltA-interacting MipA family protein
FYA20_RS01160	COG2766	serine protein kinase
FYA20_RS01170	COG2199	diguanylate cyclase activity
FYA20_RS01175	COG2199	diguanylate cyclase activity
FYA20_RS01180	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FYA20_RS01195	COG2207	Transcriptional regulator
FYA20_RS01200	COG2807	transmembrane transport
FYA20_RS01205	COG3189	MarR family transcriptional regulator
FYA20_RS01210	COG3042	response to heat
FYA20_RS01215	COG2203	Gaf domain
FYA20_RS01215	COG2199	diguanylate cyclase activity
FYA20_RS01230	COG2261	transglycosylase associated protein
FYA20_RS01240	COG3615	Tellurite resistance protein tehB
FYA20_RS01255	COG0473	3-isopropylmalate dehydrogenase activity
FYA20_RS01260	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
FYA20_RS01265	COG0318	PFAM AMP-dependent synthetase and ligase
FYA20_RS01270	COG3065	identical protein binding
FYA20_RS01275	COG1214	PFAM Peptidase M22, glycoprotease
FYA20_RS01285	COG0251	oxidation-reduction process
FYA20_RS01300	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FYA20_RS01310	COG1760	l-serine dehydratase
FYA20_RS01315	COG2200	EAL domain
FYA20_RS01320	COG1253	flavin adenine dinucleotide binding
FYA20_RS01325	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA20_RS01325	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYA20_RS01330	COG3715	PTS system
FYA20_RS01335	COG3716	PTS system mannose fructose sorbose family IID component
FYA20_RS01350	COG2226	methyltransferase
FYA20_RS01380	COG1414	Transcriptional regulator
FYA20_RS01385	COG2814	Major facilitator Superfamily
FYA20_RS01395	COG0793	Belongs to the peptidase S41A family
FYA20_RS01405	COG1956	GAF domain-containing protein
FYA20_RS01410	COG2995	paraquat-inducible protein a
FYA20_RS01415	COG3008	intermembrane lipid transfer
FYA20_RS01420	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
FYA20_RS01420	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FYA20_RS01435	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FYA20_RS01445	COG1276	copper resistance
FYA20_RS01450	COG2372	response to copper ion
FYA20_RS01460	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FYA20_RS01465	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FYA20_RS01470	COG1770	oligopeptidase
FYA20_RS01475	COG2979	Protein of unknown function (DUF533)
FYA20_RS01485	COG3141	response to X-ray
FYA20_RS01495	COG0800	Aldolase
FYA20_RS01500	COG0129	dihydroxy-acid dehydratase activity
FYA20_RS01505	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FYA20_RS01510	COG1737	Transcriptional regulator
FYA20_RS01515	COG0469	pyruvate kinase activity
FYA20_RS01520	COG1560	Kdo2-lipid A biosynthetic process
FYA20_RS01525	COG0739	heme binding
FYA20_RS01530	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
FYA20_RS01540	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FYA20_RS01570	COG0217	transcriptional regulatory protein
FYA20_RS01575	COG0494	nUDIX hydrolase
FYA20_RS01585	COG1335	isochorismatase
FYA20_RS01590	COG1801	Protein of unknown function DUF72
FYA20_RS01595	COG3788	relative of glutathione S-transferase, MAPEG superfamily
FYA20_RS01610	COG0243	molybdopterin cofactor binding
FYA20_RS01615	COG3005	denitrification pathway
FYA20_RS01625	COG3102	Protein conserved in bacteria
FYA20_RS01640	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FYA20_RS01645	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FYA20_RS01650	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
FYA20_RS01655	COG0745	RESPONSE REGULATOR receiver
FYA20_RS01665	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FYA20_RS01675	COG0840	transmembrane signaling receptor activity
FYA20_RS01680	COG0835	chemotaxis
FYA20_RS01685	COG0643	Histidine kinase
FYA20_RS01685	COG2198	Histidine kinase
FYA20_RS01690	COG1360	Flagellar Motor Protein
FYA20_RS01695	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FYA20_RS01710	COG0589	response to stress
FYA20_RS01720	COG1877	trehalose-phosphatase activity
FYA20_RS01725	COG1172	Belongs to the binding-protein-dependent transport system permease family
FYA20_RS01735	COG1879	ABC-type sugar transport system periplasmic component
FYA20_RS01740	COG1528	Iron-storage protein
FYA20_RS01765	COG1528	Iron-storage protein
FYA20_RS01775	COG0814	amino acid
FYA20_RS01780	COG3012	SEC-C Motif Domain Protein
FYA20_RS01780	COG3318	Belongs to the UPF0149 family
FYA20_RS01810	COG2197	response regulator
FYA20_RS01825	COG2197	response regulator
FYA20_RS01830	COG1126	abc transporter atp-binding protein
FYA20_RS01835	COG0765	amino acid transport
FYA20_RS01845	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA20_RS01855	COG1191	sigma factor activity
FYA20_RS01865	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
FYA20_RS01870	COG1516	flagellar protein fliS
FYA20_RS01880	COG0366	Alpha amylase catalytic
FYA20_RS01890	COG2391	methyltransferase activity
FYA20_RS01895	COG0425	Belongs to the sulfur carrier protein TusA family
FYA20_RS01900	COG2135	peptidase activity
FYA20_RS01920	COG2207	Transcriptional regulator
FYA20_RS01925	COG1881	PFAM PEBP family protein
FYA20_RS01930	COG2076	Multidrug Resistance protein
FYA20_RS01945	COG1766	The M ring may be actively involved in energy transduction
FYA20_RS01950	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FYA20_RS01955	COG1317	bacterial-type flagellum organization
FYA20_RS01960	COG1157	protein secretion by the type III secretion system
FYA20_RS01965	COG2882	bacterial-type flagellum organization
FYA20_RS01970	COG3144	bacterial-type flagellum assembly
FYA20_RS01975	COG1580	Controls the rotational direction of flagella during chemotaxis
FYA20_RS01980	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FYA20_RS01985	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FYA20_RS01990	COG3190	flagellar
FYA20_RS01995	COG1338	Plays a role in the flagellum-specific transport system
FYA20_RS02000	COG1987	bacterial-type flagellum assembly
FYA20_RS02005	COG1684	flagellar biosynthetic protein fliR
FYA20_RS02010	COG2197	response regulator
FYA20_RS02035	COG3706	GGDEF domain
FYA20_RS02040	COG5475	Uncharacterized small protein (DUF2158)
FYA20_RS02045	COG2354	Protein conserved in bacteria
FYA20_RS02050	COG0697	spore germination
FYA20_RS02055	COG3727	T/G mismatch-specific endonuclease activity
FYA20_RS02060	COG0270	DNA (cytosine-5-)-methyltransferase activity
FYA20_RS02065	COG1418	mRNA catabolic process
FYA20_RS02075	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FYA20_RS02090	COG2205	protein histidine kinase activity
FYA20_RS02095	COG0745	RESPONSE REGULATOR receiver
FYA20_RS02100	COG2351	hydroxyisourate hydrolase activity
FYA20_RS02110	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
FYA20_RS02115	COG3443	Belongs to the bacterial solute-binding protein 9 family
FYA20_RS02120	COG0582	viral genome integration into host DNA
FYA20_RS02275	COG0582	viral genome integration into host DNA
FYA20_RS02280	COG1169	isochorismate synthase
FYA20_RS02285	COG2814	Major facilitator Superfamily
FYA20_RS02290	COG1132	(ABC) transporter
FYA20_RS02305	COG3433	isochorismatase activity
FYA20_RS02305	COG2226	methyltransferase
FYA20_RS02305	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FYA20_RS02325	COG1021	2,3-dihydroxybenzoate-AMP ligase
FYA20_RS02330	COG4771	TonB-dependent receptor
FYA20_RS02335	COG2373	Large extracellular alpha-helical protein
FYA20_RS02335	COG4932	domain protein
FYA20_RS02335	COG1388	LysM domain
FYA20_RS02340	COG1470	cell adhesion involved in biofilm formation
FYA20_RS02340	COG1388	LysM domain
FYA20_RS02345	COG1388	LysM domain
FYA20_RS02345	COG1470	cell adhesion involved in biofilm formation
FYA20_RS02350	COG1470	cell adhesion involved in biofilm formation
FYA20_RS02350	COG1388	LysM domain
FYA20_RS02360	COG0477	Major facilitator Superfamily
FYA20_RS02365	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FYA20_RS02370	COG0217	transcriptional regulatory protein
FYA20_RS02380	COG0583	DNA-binding transcription factor activity
FYA20_RS02385	COG0583	DNA-binding transcription factor activity
FYA20_RS02395	COG0534	Mate efflux family protein
FYA20_RS02405	COG0582	viral genome integration into host DNA
FYA20_RS02420	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
FYA20_RS02445	COG0154	amidase activity
FYA20_RS02475	COG1960	acyl-CoA dehydrogenase activity
FYA20_RS02480	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FYA20_RS02485	COG1250	3-hydroxyacyl-CoA dehydrogenase
FYA20_RS02505	COG2197	response regulator
FYA20_RS02530	COG1376	ErfK ybiS ycfS ynhG family protein
FYA20_RS02545	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
FYA20_RS02565	COG4771	TonB-dependent receptor
FYA20_RS02570	COG1475	DNA binding
FYA20_RS02575	COG3969	phosphoadenosine phosphosulfate
FYA20_RS02580	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FYA20_RS02585	COG1215	transferase activity, transferring glycosyl groups
FYA20_RS02605	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYA20_RS02620	COG1735	metal-dependent hydrolase with the TIM-barrel fold
FYA20_RS02670	COG3547	Transposase (IS116 IS110 IS902 family)
FYA20_RS02740	COG1120	ATPase activity
FYA20_RS02745	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYA20_RS02805	COG2003	Belongs to the UPF0758 family
FYA20_RS02850	COG1289	transmembrane transporter activity
FYA20_RS02860	COG1686	Belongs to the peptidase S11 family
FYA20_RS02865	COG2925	Exonuclease
FYA20_RS02870	COG0531	amino acid
FYA20_RS02880	COG0583	DNA-binding transcription factor activity
FYA20_RS02885	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FYA20_RS02890	COG4115	mRNA cleavage
FYA20_RS02895	COG2161	toxin-antitoxin pair type II binding
FYA20_RS02910	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FYA20_RS02920	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FYA20_RS02920	COG0131	Imidazoleglycerol-phosphate dehydratase
FYA20_RS02925	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FYA20_RS02945	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
FYA20_RS02950	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
FYA20_RS02955	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
FYA20_RS02965	COG5433	transposase activity
FYA20_RS03015	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
FYA20_RS03030	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FYA20_RS03040	COG0438	transferase activity, transferring glycosyl groups
FYA20_RS03045	COG2327	Polysaccharide pyruvyl transferase
FYA20_RS03050	COG2244	polysaccharide biosynthetic process
FYA20_RS03055	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FYA20_RS03060	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FYA20_RS03065	COG0662	Cupin 2, conserved barrel domain protein
FYA20_RS03065	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
FYA20_RS03070	COG0297	glycogen (starch) synthase activity
FYA20_RS03075	COG1051	belongs to the nudix hydrolase family
FYA20_RS03080	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FYA20_RS03085	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
FYA20_RS03090	COG0110	maltose O-acetyltransferase activity
FYA20_RS03095	COG1216	Glycosyl transferase, family 2
FYA20_RS03105	COG0438	transferase activity, transferring glycosyl groups
FYA20_RS03110	COG1045	serine acetyltransferase
FYA20_RS03115	COG0463	Glycosyl transferase, family 2
FYA20_RS03120	COG0489	protein tyrosine kinase activity
FYA20_RS03120	COG3206	protein involved in exopolysaccharide biosynthesis
FYA20_RS03125	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FYA20_RS03130	COG1596	polysaccharide export
FYA20_RS03135	COG1253	flavin adenine dinucleotide binding
FYA20_RS03140	COG2982	Protein involved in outer membrane biogenesis
FYA20_RS03150	COG0572	uridine kinase
FYA20_RS03155	COG5002	protein histidine kinase activity
FYA20_RS03155	COG5001	Diguanylate cyclase
FYA20_RS03155	COG3447	MASE1 domain protein
FYA20_RS03160	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
FYA20_RS03165	COG0443	Heat shock 70 kDa protein
FYA20_RS03170	COG4248	protein with protein kinase and helix-hairpin-helix DNA-binding domains
FYA20_RS03175	COG0631	protein serine/threonine phosphatase activity
FYA20_RS03180	COG4245	von Willebrand factor, type A
FYA20_RS03215	COG2205	protein histidine kinase activity
FYA20_RS03220	COG0745	RESPONSE REGULATOR receiver
FYA20_RS03230	COG0826	peptidase U32
FYA20_RS03250	COG1063	alcohol dehydrogenase
FYA20_RS03255	COG3775	system Galactitol-specific IIC component
FYA20_RS03260	COG3414	Phosphotransferase system galactitol-specific IIB component
FYA20_RS03265	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA20_RS03280	COG1830	Aldolase
FYA20_RS03285	COG2211	Major facilitator Superfamily
FYA20_RS03290	COG1397	ADP-ribosylglycohydrolase
FYA20_RS03295	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYA20_RS03300	COG2188	Transcriptional regulator
FYA20_RS03305	COG3757	hydrolase, family 25
FYA20_RS03310	COG0351	phosphomethylpyrimidine kinase
FYA20_RS03330	COG5455	response to cobalt ion
FYA20_RS03335	COG3539	Fimbrial protein
FYA20_RS03340	COG3188	usher protein
FYA20_RS03345	COG3121	Chaperone
FYA20_RS03350	COG3539	Fimbrial protein
FYA20_RS03360	COG0489	protein tyrosine kinase activity
FYA20_RS03370	COG3831	ATPase activity
FYA20_RS03375	COG3831	ATPase activity
FYA20_RS03385	COG0714	Associated with various cellular activities
FYA20_RS03390	COG2425	protein containing a von Willebrand factor type A (vWA) domain
FYA20_RS03395	COG3552	Protein containing von Willebrand factor type A (VWA) domain
FYA20_RS03400	COG4715	Zinc finger, swim domain protein
FYA20_RS03405	COG4808	Protein conserved in bacteria
FYA20_RS03410	COG4807	Protein conserved in bacteria
FYA20_RS03415	COG3279	Response regulator of the LytR AlgR family
FYA20_RS03420	COG3275	phosphorelay sensor kinase activity
FYA20_RS03425	COG0789	Transcriptional regulator
FYA20_RS03435	COG1174	glycine betaine transport
FYA20_RS03440	COG1125	glycine betaine transport
FYA20_RS03445	COG1174	glycine betaine transport
FYA20_RS03450	COG1732	Glycine betaine
FYA20_RS03455	COG1472	Belongs to the glycosyl hydrolase 3 family
FYA20_RS03460	COG0277	FAD linked oxidase domain protein
FYA20_RS03465	COG1686	Belongs to the peptidase S11 family
FYA20_RS03475	COG0586	Pfam SNARE associated Golgi protein
FYA20_RS03480	COG1028	Short-chain dehydrogenase reductase Sdr
FYA20_RS03485	COG1538	Outer membrane efflux protein
FYA20_RS03495	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FYA20_RS03505	COG1346	cytolysis
FYA20_RS03515	COG2949	membrane
FYA20_RS03525	COG0493	'glutamate synthase
FYA20_RS03530	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FYA20_RS03530	COG0167	dihydroorotate dehydrogenase activity
FYA20_RS03535	COG4211	Belongs to the binding-protein-dependent transport system permease family
FYA20_RS03545	COG1879	ABC-type sugar transport system periplasmic component
FYA20_RS03550	COG1609	Transcriptional regulator
FYA20_RS03555	COG2311	Membrane
FYA20_RS03565	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
FYA20_RS03570	COG4771	TonB-dependent receptor
FYA20_RS03575	COG0833	amino acid
FYA20_RS03580	COG0583	DNA-binding transcription factor activity
FYA20_RS03585	COG2855	membrane
FYA20_RS03595	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYA20_RS03595	COG1522	sequence-specific DNA binding
FYA20_RS03605	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FYA20_RS03610	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FYA20_RS03615	COG2313	pseudouridylate synthase activity
FYA20_RS03620	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYA20_RS03625	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
FYA20_RS03625	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYA20_RS03625	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYA20_RS03630	COG1105	Belongs to the carbohydrate kinase PfkB family
FYA20_RS03635	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA20_RS03635	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA20_RS03640	COG2814	Major facilitator Superfamily
FYA20_RS03655	COG0246	Mannitol dehydrogenase
FYA20_RS03660	COG0523	cobalamin synthesis protein
FYA20_RS03665	COG0671	phosphoesterase, PA-phosphatase related
FYA20_RS03670	COG0791	NLP P60 protein
FYA20_RS03675	COG2200	EAL domain
FYA20_RS03680	COG4166	transmembrane transport
FYA20_RS03685	COG4174	ABC transporter (Permease)
FYA20_RS03690	COG4239	(ABC) transporter, permease
FYA20_RS03695	COG4172	Belongs to the ABC transporter superfamily
FYA20_RS03705	COG2814	Major facilitator Superfamily
FYA20_RS03710	COG1187	pseudouridine synthase activity
FYA20_RS03715	COG1061	Type III restriction enzyme res subunit
FYA20_RS03735	COG3083	sulfuric ester hydrolase activity
FYA20_RS03750	COG2197	response regulator
FYA20_RS03755	COG3088	subunit of a heme lyase
FYA20_RS03755	COG4235	cytochrome complex assembly
FYA20_RS03760	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FYA20_RS03765	COG1138	Cytochrome C-type biogenesis protein
FYA20_RS03775	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FYA20_RS03780	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FYA20_RS03785	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FYA20_RS03795	COG3005	denitrification pathway
FYA20_RS03800	COG3043	anaerobic respiration
FYA20_RS03805	COG0348	domain, Protein
FYA20_RS03810	COG0437	4 iron, 4 sulfur cluster binding
FYA20_RS03820	COG3062	negative regulation of establishment of protein localization
FYA20_RS03825	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA20_RS03825	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA20_RS03840	COG4615	Cyclic peptide transporter
FYA20_RS03845	COG3145	DNA-N1-methyladenine dioxygenase activity
FYA20_RS03850	COG2169	Transcriptional regulator
FYA20_RS03850	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FYA20_RS03855	COG1477	protein flavinylation
FYA20_RS03860	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FYA20_RS03865	COG0642	Histidine kinase
FYA20_RS03865	COG2198	Histidine kinase
FYA20_RS03870	COG2197	response regulator
FYA20_RS03875	COG0784	Response regulator, receiver
FYA20_RS03875	COG2205	protein histidine kinase activity
FYA20_RS03880	COG3852	Histidine kinase
FYA20_RS03885	COG2204	response regulator
FYA20_RS03890	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
FYA20_RS03895	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FYA20_RS03900	COG2031	fatty acid transporter
FYA20_RS03905	COG0183	Belongs to the thiolase family
FYA20_RS03910	COG4676	Protein conserved in bacteria
FYA20_RS03915	COG5445	Predicted secreted protein (DUF2300)
FYA20_RS03925	COG3234	Protein of unknown function (DUF1175)
FYA20_RS03930	COG4685	Uncharacterized protein conserved in bacteria (DUF2138)
FYA20_RS03935	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FYA20_RS03945	COG3468	outer membrane autotransporter barrel domain protein
FYA20_RS03950	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FYA20_RS03955	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FYA20_RS03960	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FYA20_RS03965	COG3642	lipopolysaccharide core region biosynthetic process
FYA20_RS03970	COG0584	glycerophosphoryl diester phosphodiesterase
FYA20_RS03975	COG2271	Major facilitator Superfamily
FYA20_RS03980	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FYA20_RS03990	COG0247	lactate metabolic process
FYA20_RS03995	COG5464	transposase or invertase
FYA20_RS04010	COG2271	Major facilitator Superfamily
FYA20_RS04020	COG1414	Transcriptional regulator
FYA20_RS04065	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
FYA20_RS04085	COG0318	PFAM AMP-dependent synthetase and ligase
FYA20_RS04095	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FYA20_RS04110	COG1169	isochorismate synthase
FYA20_RS04115	COG4575	ribosome binding
FYA20_RS04120	COG2153	protein acetylation
FYA20_RS04130	COG2304	oxidoreductase activity
FYA20_RS04135	COG2234	aminopeptidase activity
FYA20_RS04150	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYA20_RS04155	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FYA20_RS04165	COG0839	Belongs to the complex I subunit 6 family
FYA20_RS04180	COG1034	ATP synthesis coupled electron transport
FYA20_RS04185	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
FYA20_RS04190	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
FYA20_RS04210	COG0583	DNA-binding transcription factor activity
FYA20_RS04215	COG0436	Aminotransferase
FYA20_RS04225	COG0471	metal ion transport
FYA20_RS04225	COG0490	domain, Protein
FYA20_RS04230	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FYA20_RS04245	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FYA20_RS04250	COG0280	phosphate acetyltransferase
FYA20_RS04250	COG0857	belongs to the CobB CobQ family
FYA20_RS04255	COG1288	antiporter activity
FYA20_RS04260	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
FYA20_RS04265	COG0622	Phosphoesterase
FYA20_RS04270	COG0625	glutathione transferase activity
FYA20_RS04275	COG0625	glutathione transferase activity
FYA20_RS04280	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FYA20_RS04285	COG1090	epimerase
FYA20_RS04290	COG5464	transposase or invertase
FYA20_RS04295	COG4598	ABC transporter
FYA20_RS04300	COG4160	amino acid transport
FYA20_RS04305	COG4215	(ABC) transporter
FYA20_RS04310	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA20_RS04315	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA20_RS04320	COG0163	prenyltransferase activity
FYA20_RS04325	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
FYA20_RS04330	COG1286	toxin biosynthetic process
FYA20_RS04335	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
FYA20_RS04340	COG0285	dihydrofolate synthase activity
FYA20_RS04350	COG0586	Pfam SNARE associated Golgi protein
FYA20_RS04360	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FYA20_RS04375	COG2814	Major facilitator Superfamily
FYA20_RS04380	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FYA20_RS04395	COG3101	peptidyl-lysine hydroxylation
FYA20_RS04400	COG0730	response to heat
FYA20_RS04435	COG3539	Fimbrial protein
FYA20_RS04440	COG3539	Fimbrial protein
FYA20_RS04445	COG3539	Fimbrial protein
FYA20_RS04450	COG3121	Chaperone
FYA20_RS04455	COG3188	usher protein
FYA20_RS04460	COG3539	Fimbrial protein
FYA20_RS04465	COG2062	phosphohistidine phosphatase, SixA
FYA20_RS04480	COG3691	Protein conserved in bacteria
FYA20_RS04485	COG2067	long-chain fatty acid transport protein
FYA20_RS04495	COG2116	formate transmembrane transporter activity
FYA20_RS04505	COG0583	DNA-binding transcription factor activity
FYA20_RS04510	COG2610	gluconate transmembrane transporter activity
FYA20_RS04515	COG3048	D-serine ammonia-lyase activity
FYA20_RS04520	COG0477	Major facilitator Superfamily
FYA20_RS04525	COG1566	PFAM secretion protein HlyD family protein
FYA20_RS04530	COG2197	response regulator
FYA20_RS04535	COG2205	protein histidine kinase activity
FYA20_RS04535	COG0784	Response regulator, receiver
FYA20_RS04535	COG2198	Histidine kinase
FYA20_RS04535	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA20_RS04540	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FYA20_RS04545	COG0679	Auxin Efflux Carrier
FYA20_RS04550	COG0028	Belongs to the TPP enzyme family
FYA20_RS04575	COG1560	Kdo2-lipid A biosynthetic process
FYA20_RS04585	COG0436	Aminotransferase
FYA20_RS04590	COG3275	phosphorelay sensor kinase activity
FYA20_RS04595	COG3279	Response regulator of the LytR AlgR family
FYA20_RS04600	COG2207	Transcriptional regulator
FYA20_RS04605	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA20_RS04605	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FYA20_RS04605	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA20_RS04610	COG1363	Peptidase, m42
FYA20_RS04615	COG0006	proline dipeptidase activity
FYA20_RS04620	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYA20_RS04625	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYA20_RS04650	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FYA20_RS04655	COG2199	diguanylate cyclase activity
FYA20_RS04655	COG2200	EAL domain
FYA20_RS04670	COG3415	Transposase
FYA20_RS04675	COG3415	Transposase
FYA20_RS04680	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FYA20_RS04700	COG0583	DNA-binding transcription factor activity
FYA20_RS04710	COG2211	Major facilitator Superfamily
FYA20_RS04715	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
FYA20_RS04725	COG0583	DNA-binding transcription factor activity
FYA20_RS04730	COG0385	Bile acid
FYA20_RS04735	COG3530	Putative quorum-sensing-regulated virulence factor
FYA20_RS04755	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FYA20_RS04760	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA20_RS04765	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FYA20_RS04770	COG2190	(PTS) system
FYA20_RS04785	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FYA20_RS04790	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FYA20_RS04795	COG4208	sulfate ABC transporter
FYA20_RS04800	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
FYA20_RS04805	COG4150	thiosulfate binding
FYA20_RS04810	COG1028	Short-chain dehydrogenase reductase Sdr
FYA20_RS04825	COG1263	PTS System
FYA20_RS04825	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYA20_RS04830	COG2837	iron assimilation
FYA20_RS04850	COG0860	N-Acetylmuramoyl-L-alanine amidase
FYA20_RS04860	COG2207	Transcriptional regulator
FYA20_RS04865	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
FYA20_RS04870	COG4816	utilization protein
FYA20_RS04880	COG4303	Ethanolamine ammonia lyase large subunit
FYA20_RS04885	COG4819	ethanolamine utilization protein
FYA20_RS04890	COG3192	ethanolamine utilization protein
FYA20_RS04895	COG1454	alcohol dehydrogenase
FYA20_RS04900	COG4820	ethanolamine utilization protein (EutJ)
FYA20_RS04905	COG1012	belongs to the aldehyde dehydrogenase family
FYA20_RS04910	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
FYA20_RS04915	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
FYA20_RS04920	COG0280	phosphate acetyltransferase
FYA20_RS04925	COG4812	Cobalamin adenosyltransferase
FYA20_RS04930	COG4766	ethanolamine catabolic process
FYA20_RS04935	COG4917	ethanolamine utilization protein
FYA20_RS04940	COG4810	utilization protein
FYA20_RS04945	COG0281	malic enzyme
FYA20_RS04945	COG0280	phosphate acetyltransferase
FYA20_RS04950	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FYA20_RS04955	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FYA20_RS04960	COG5342	invasion associated locus B
FYA20_RS04970	COG0493	'glutamate synthase
FYA20_RS04970	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA20_RS04975	COG3850	Histidine kinase
FYA20_RS04980	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FYA20_RS04990	COG1393	Belongs to the ArsC family
FYA20_RS05005	COG0400	carboxylic ester hydrolase activity
FYA20_RS05015	COG2321	neutral zinc metallopeptidase
FYA20_RS05025	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
FYA20_RS05035	COG2716	regulation of RNA biosynthetic process
FYA20_RS05040	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FYA20_RS05045	COG0628	permease
FYA20_RS05050	COG4783	chaperone-mediated protein folding
FYA20_RS05055	COG1393	Belongs to the ArsC family
FYA20_RS05065	COG2233	PERMEase
FYA20_RS05080	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FYA20_RS05085	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
FYA20_RS05090	COG0248	Ppx GppA phosphatase
FYA20_RS05095	COG2200	EAL domain
FYA20_RS05105	COG3133	Outer membrane lipoprotein
FYA20_RS05120	COG0517	IMP dehydrogenase activity
FYA20_RS05120	COG0516	GMP reductase activity
FYA20_RS05145	COG1645	bacterial-type flagellum-dependent swarming motility
FYA20_RS05160	COG2976	Protein conserved in bacteria
FYA20_RS05190	COG4953	penicillin-binding protein 1C
FYA20_RS05195	COG2373	Large extracellular alpha-helical protein
FYA20_RS05200	COG2897	thiosulfate sulfurtransferase activity
FYA20_RS05215	COG2975	iron-sulfur cluster assembly
FYA20_RS05220	COG0633	Ferredoxin
FYA20_RS05240	COG0822	iron-sulfur transferase activity
FYA20_RS05260	COG0483	inositol monophosphate 1-phosphatase activity
FYA20_RS05265	COG1073	alpha beta
FYA20_RS05270	COG3711	transcriptional antiterminator
FYA20_RS05275	COG2814	Major facilitator Superfamily
FYA20_RS05280	COG2259	Doxx family
FYA20_RS05285	COG2017	converts alpha-aldose to the beta-anomer
FYA20_RS05290	COG1063	alcohol dehydrogenase
FYA20_RS05295	COG1172	Belongs to the binding-protein-dependent transport system permease family
FYA20_RS05300	COG1129	ABC transporter
FYA20_RS05305	COG1879	ABC-type sugar transport system periplasmic component
FYA20_RS05310	COG0457	Tetratricopeptide repeat
FYA20_RS05315	COG1940	carbohydrate kinase activity
FYA20_RS05325	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FYA20_RS05325	COG1017	nitric oxide dioxygenase activity
FYA20_RS05330	COG0347	Belongs to the P(II) protein family
FYA20_RS05335	COG2204	response regulator
FYA20_RS05340	COG3170	Tfp pilus assembly protein FimV
FYA20_RS05345	COG2205	protein histidine kinase activity
FYA20_RS05350	COG0047	phosphoribosylformylglycinamidine synthase activity
FYA20_RS05350	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FYA20_RS05360	COG0590	tRNA wobble adenosine to inosine editing
FYA20_RS05365	COG0560	Phosphoserine phosphatase
FYA20_RS05370	COG1737	Transcriptional regulator
FYA20_RS05375	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA20_RS05390	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FYA20_RS05410	COG0681	Belongs to the peptidase S26 family
FYA20_RS05420	COG3086	response to oxidative stress
FYA20_RS05425	COG3026	antisigma factor binding
FYA20_RS05430	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
FYA20_RS05435	COG1595	DNA-templated transcription, initiation
FYA20_RS05445	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FYA20_RS05455	COG0513	Belongs to the DEAD box helicase family
FYA20_RS05460	COG0583	DNA-binding transcription factor activity
FYA20_RS05480	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FYA20_RS05485	COG3118	belongs to the thioredoxin family
FYA20_RS05490	COG3148	PFAM DTW domain containing protein
FYA20_RS05495	COG0045	succinate-CoA ligase (ADP-forming) activity
FYA20_RS05495	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FYA20_RS05495	COG1042	CoA-binding domain protein
FYA20_RS05500	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FYA20_RS05505	COG5544	Lipoprotein
FYA20_RS05510	COG0477	Major facilitator Superfamily
FYA20_RS05570	COG0542	response to heat
FYA20_RS05580	COG0564	pseudouridine synthase activity
FYA20_RS05585	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FYA20_RS05590	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FYA20_RS05605	COG2314	TM2 domain
FYA20_RS05665	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FYA20_RS05785	COG4695	Portal protein
FYA20_RS05795	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
FYA20_RS05875	COG1396	sequence-specific DNA binding
FYA20_RS05880	COG4974	Belongs to the 'phage' integrase family
FYA20_RS05890	COG0077	Prephenate dehydratase
FYA20_RS05890	COG1605	Chorismate mutase
FYA20_RS05895	COG0287	Prephenate dehydrogenase
FYA20_RS05895	COG1605	Chorismate mutase
FYA20_RS05900	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FYA20_RS05915	COG2199	diguanylate cyclase activity
FYA20_RS05920	COG2885	chlorophyll binding
FYA20_RS05945	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FYA20_RS05950	COG4137	Cytochrome C assembly protein
FYA20_RS05955	COG4536	flavin adenine dinucleotide binding
FYA20_RS05970	COG0497	DNA recombination
FYA20_RS05975	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FYA20_RS05985	COG2867	negative regulation of translational initiation
FYA20_RS06010	COG0579	oxidoreductase
FYA20_RS06015	COG1012	belongs to the aldehyde dehydrogenase family
FYA20_RS06020	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FYA20_RS06025	COG1113	amino acid transport
FYA20_RS06030	COG1802	Transcriptional regulator
FYA20_RS06035	COG1652	LysM domain
FYA20_RS06040	COG0401	homolog of Blt101
FYA20_RS06045	COG0640	Transcriptional regulator
FYA20_RS06050	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FYA20_RS06055	COG2916	Histone family protein nucleoid-structuring protein H-NS
FYA20_RS06070	COG4575	ribosome binding
FYA20_RS06080	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYA20_RS06085	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FYA20_RS06095	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FYA20_RS06100	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FYA20_RS06105	COG4175	Glycine betaine
FYA20_RS06110	COG4176	ABC-type proline glycine betaine transport system permease component
FYA20_RS06115	COG2113	Glycine betaine
FYA20_RS06120	COG2814	Major facilitator Superfamily
FYA20_RS06125	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
FYA20_RS06135	COG1846	Transcriptional regulator
FYA20_RS06140	COG1566	PFAM secretion protein HlyD family protein
FYA20_RS06145	COG2814	Major facilitator Superfamily
FYA20_RS06170	COG1238	metal cluster binding
FYA20_RS06175	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FYA20_RS06205	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
FYA20_RS06225	COG1546	Belongs to the CinA family
FYA20_RS06230	COG2951	lytic endotransglycosylase activity
FYA20_RS06235	COG3730	PTS system glucitol sorbitol-specific
FYA20_RS06240	COG3732	PTS system glucitol sorbitol-specific
FYA20_RS06250	COG1028	Short-chain dehydrogenase reductase Sdr
FYA20_RS06255	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA20_RS06260	COG1349	DNA-binding transcription factor activity
FYA20_RS06265	COG0517	IMP dehydrogenase activity
FYA20_RS06265	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
FYA20_RS06285	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
FYA20_RS06290	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA20_RS06295	COG1609	Transcriptional regulator
FYA20_RS06300	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYA20_RS06300	COG1263	PTS System
FYA20_RS06305	COG2723	6-phospho-beta-galactosidase activity
FYA20_RS06310	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
FYA20_RS06320	COG3260	NADH ubiquinone oxidoreductase 20
FYA20_RS06325	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYA20_RS06330	COG3261	NADH dehydrogenase
FYA20_RS06330	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
FYA20_RS06335	COG0650	Formate hydrogenlyase subunit 4
FYA20_RS06340	COG0651	ATP synthesis coupled electron transport
FYA20_RS06345	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA20_RS06360	COG0375	protein maturation
FYA20_RS06365	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
FYA20_RS06370	COG0298	carbon dioxide binding
FYA20_RS06375	COG0409	Hydrogenase expression formation protein
FYA20_RS06380	COG0309	Hydrogenase expression formation protein (HypE)
FYA20_RS06385	COG3604	Transcriptional regulator
FYA20_RS06400	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
FYA20_RS06405	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FYA20_RS06410	COG1349	DNA-binding transcription factor activity
FYA20_RS06415	COG2084	Dehydrogenase
FYA20_RS06420	COG3395	kinase activity
FYA20_RS06425	COG0235	Class ii aldolase
FYA20_RS06430	COG3622	Belongs to the hyi family
FYA20_RS06435	COG2610	gluconate transmembrane transporter activity
FYA20_RS06450	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FYA20_RS06455	COG4942	peptidase
FYA20_RS06455	COG1388	LysM domain
FYA20_RS06470	COG0585	pseudouridine synthase activity
FYA20_RS06510	COG2234	aminopeptidase activity
FYA20_RS06535	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
FYA20_RS06540	COG0720	synthase
FYA20_RS06550	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
FYA20_RS06555	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
FYA20_RS06560	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
FYA20_RS06565	COG2086	electron transfer activity
FYA20_RS06575	COG0277	FAD linked oxidase domain protein
FYA20_RS06580	COG1028	Short-chain dehydrogenase reductase Sdr
FYA20_RS06585	COG2223	nitrite transmembrane transporter activity
FYA20_RS06590	COG1070	Carbohydrate kinase
FYA20_RS06620	COG0602	queuosine metabolic process
FYA20_RS06630	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
FYA20_RS06645	COG3956	TIGRFAM MazG family protein
FYA20_RS06650	COG2337	Toxic component of a toxin-antitoxin (TA) module
FYA20_RS06655	COG2336	PFAM SpoVT AbrB
FYA20_RS06660	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FYA20_RS06670	COG3437	response regulator, receiver
FYA20_RS06670	COG4999	Histidine kinase
FYA20_RS06670	COG3850	Histidine kinase
FYA20_RS06670	COG2205	protein histidine kinase activity
FYA20_RS06675	COG4948	Mandelate Racemase Muconate Lactonizing
FYA20_RS06680	COG4948	Mandelate Racemase Muconate Lactonizing
FYA20_RS06685	COG2271	Major facilitator Superfamily
FYA20_RS06690	COG0716	FMN binding
FYA20_RS06695	COG0564	pseudouridine synthase activity
FYA20_RS06700	COG3098	single-species biofilm formation
FYA20_RS06715	COG1611	Belongs to the LOG family
FYA20_RS06720	COG0814	amino acid
FYA20_RS06725	COG1760	l-serine dehydratase
FYA20_RS06735	COG1454	alcohol dehydrogenase
FYA20_RS06740	COG0235	Class ii aldolase
FYA20_RS06745	COG0738	Major facilitator superfamily
FYA20_RS06755	COG1070	Carbohydrate kinase
FYA20_RS06765	COG1349	DNA-binding transcription factor activity
FYA20_RS06775	COG2363	Small membrane protein
FYA20_RS06780	COG0583	DNA-binding transcription factor activity
FYA20_RS06790	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FYA20_RS06795	COG2166	iron-sulfur cluster assembly
FYA20_RS06800	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FYA20_RS06805	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
FYA20_RS06845	COG2885	chlorophyll binding
FYA20_RS06945	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FYA20_RS06950	COG1263	PTS System
FYA20_RS06950	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYA20_RS06955	COG3711	transcriptional antiterminator
FYA20_RS06960	COG0860	N-Acetylmuramoyl-L-alanine amidase
FYA20_RS06965	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FYA20_RS06965	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
FYA20_RS06970	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FYA20_RS06975	COG1074	ATP-dependent DNA helicase activity
FYA20_RS06980	COG1025	Belongs to the peptidase M16 family
FYA20_RS06985	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
FYA20_RS06990	COG4967	type IV pilus modification protein PilV
FYA20_RS07000	COG4795	General secretion pathway protein
FYA20_RS07005	COG2165	general secretion pathway protein
FYA20_RS07020	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
FYA20_RS07040	COG0861	Integral membrane protein TerC family
FYA20_RS07050	COG0667	Aldo Keto reductase
FYA20_RS07070	COG1609	Transcriptional regulator
FYA20_RS07080	COG0583	DNA-binding transcription factor activity
FYA20_RS07085	COG1794	racemase activity, acting on amino acids and derivatives
FYA20_RS07090	COG2814	Major facilitator Superfamily
FYA20_RS07095	COG1028	Short-chain dehydrogenase reductase Sdr
FYA20_RS07105	COG0183	Belongs to the thiolase family
FYA20_RS07110	COG0814	amino acid
FYA20_RS07120	COG4942	peptidase
FYA20_RS07125	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FYA20_RS07130	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
FYA20_RS07135	COG2080	2 iron, 2 sulfur cluster binding
FYA20_RS07140	COG3829	transcription factor binding
FYA20_RS07145	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FYA20_RS07150	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FYA20_RS07155	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FYA20_RS07165	COG0549	Belongs to the carbamate kinase family
FYA20_RS07170	COG3608	succinylglutamate desuccinylase aspartoacylase
FYA20_RS07170	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
FYA20_RS07175	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FYA20_RS07180	COG2068	MobA-Related Protein
FYA20_RS07185	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA20_RS07185	COG0493	'glutamate synthase
FYA20_RS07190	COG0402	S-adenosylhomocysteine deaminase activity
FYA20_RS07195	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
FYA20_RS07200	COG2080	2 iron, 2 sulfur cluster binding
FYA20_RS07200	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FYA20_RS07205	COG2233	PERMEase
FYA20_RS07210	COG0402	S-adenosylhomocysteine deaminase activity
FYA20_RS07215	COG2252	PERMEase
FYA20_RS07220	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA20_RS07225	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA20_RS07225	COG0493	'glutamate synthase
FYA20_RS07230	COG2233	PERMEase
FYA20_RS07250	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FYA20_RS07260	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FYA20_RS07265	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FYA20_RS07270	COG4974	Belongs to the 'phage' integrase family
FYA20_RS07275	COG0716	FMN binding
FYA20_RS07285	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
FYA20_RS07295	COG1272	protein, Hemolysin III
FYA20_RS07305	COG2723	6-phospho-beta-galactosidase activity
FYA20_RS07330	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FYA20_RS07335	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FYA20_RS07340	COG0006	proline dipeptidase activity
FYA20_RS07360	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FYA20_RS07370	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FYA20_RS07390	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FYA20_RS07390	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FYA20_RS07395	COG0583	DNA-binding transcription factor activity
FYA20_RS07400	COG2968	Membrane
FYA20_RS07405	COG1279	arginine transmembrane transporter activity
FYA20_RS07410	COG0668	transmembrane transport
FYA20_RS07415	COG0191	fructose-bisphosphate aldolase activity
FYA20_RS07450	COG1122	ATPase activity
FYA20_RS07455	COG1072	(Pantothenic acid kinase))
FYA20_RS07470	COG1063	alcohol dehydrogenase
FYA20_RS07475	COG2213	PTS system mannitol-specific
FYA20_RS07480	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA20_RS07485	COG0330	HflC and HflK could
FYA20_RS07490	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FYA20_RS07495	COG0501	Belongs to the peptidase M48B family
FYA20_RS07510	COG1166	arginine decarboxylase activity
FYA20_RS07525	COG2814	Major facilitator Superfamily
FYA20_RS07535	COG2356	endonuclease I
FYA20_RS07540	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FYA20_RS07545	COG0189	ligase activity
FYA20_RS07560	COG2805	Type II/IV secretion system protein
FYA20_RS07565	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FYA20_RS07570	COG0762	integral membrane protein
FYA20_RS07580	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FYA20_RS07585	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FYA20_RS07595	COG0252	asparaginase activity
FYA20_RS07605	COG3171	Protein conserved in bacteria
FYA20_RS07615	COG1194	a g-specific adenine glycosylase
FYA20_RS07630	COG2211	Major facilitator Superfamily
FYA20_RS07635	COG1982	Orn Lys Arg decarboxylase major
FYA20_RS07640	COG1811	Na channel or pump
FYA20_RS07650	COG0582	viral genome integration into host DNA
FYA20_RS07670	COG2963	transposase activity
FYA20_RS07795	COG3842	ATPase activity
FYA20_RS07800	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYA20_RS07805	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FYA20_RS07870	COG2814	Major facilitator Superfamily
FYA20_RS07875	COG0673	inositol 2-dehydrogenase activity
FYA20_RS07935	COG0204	Acyl-transferase
FYA20_RS07945	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FYA20_RS07960	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FYA20_RS07965	COG1216	Glycosyl transferase, family 2
FYA20_RS07990	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FYA20_RS08000	COG1028	Short-chain dehydrogenase reductase Sdr
FYA20_RS08005	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FYA20_RS08020	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA20_RS08030	COG3037	sugar-specific permease SgaT UlaA
FYA20_RS08050	COG0738	Major facilitator superfamily
FYA20_RS08060	COG1349	DNA-binding transcription factor activity
FYA20_RS08065	COG0440	acetolactate synthase activity
FYA20_RS08120	COG4983	Phage plasmid primase, P4 family domain protein
FYA20_RS08135	COG2020	methyltransferase activity
FYA20_RS08165	COG2003	Belongs to the UPF0758 family
FYA20_RS08255	COG2089	acid synthase
FYA20_RS08275	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FYA20_RS08305	COG2165	general secretion pathway protein
FYA20_RS08310	COG1459	type II secretion system
FYA20_RS08315	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FYA20_RS08340	COG3064	Membrane
FYA20_RS08345	COG1620	l-lactate permease
FYA20_RS08350	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FYA20_RS08355	COG3193	protein, possibly involved in utilization of glycolate and propanediol
FYA20_RS08360	COG0247	lactate metabolic process
FYA20_RS08365	COG0277	FAD linked oxidase domain protein
FYA20_RS08370	COG0277	FAD linked oxidase domain protein
FYA20_RS08375	COG2186	Transcriptional regulator
FYA20_RS08380	COG0456	acetyltransferase
FYA20_RS08385	COG0318	PFAM AMP-dependent synthetase and ligase
FYA20_RS08395	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FYA20_RS08400	COG0156	8-amino-7-oxononanoate synthase activity
FYA20_RS08410	COG0795	lipopolysaccharide-transporting ATPase activity
FYA20_RS08415	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
FYA20_RS08425	COG2244	polysaccharide biosynthetic process
FYA20_RS08430	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FYA20_RS08435	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FYA20_RS08440	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FYA20_RS08445	COG0306	phosphate transporter
FYA20_RS08450	COG0754	glutathionylspermidine amidase activity
FYA20_RS08455	COG0625	glutathione transferase activity
FYA20_RS08460	COG0298	carbon dioxide binding
FYA20_RS08465	COG0375	protein maturation
FYA20_RS08470	COG1773	rubredoxin
FYA20_RS08475	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
FYA20_RS08480	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
FYA20_RS08485	COG5557	Pfam Polysulphide reductase, NrfD
FYA20_RS08490	COG0437	4 iron, 4 sulfur cluster binding
FYA20_RS08495	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
FYA20_RS08510	COG0667	Aldo Keto reductase
FYA20_RS08515	COG2862	Uncharacterized protein family, UPF0114
FYA20_RS08520	COG1028	Short-chain dehydrogenase reductase Sdr
FYA20_RS08525	COG0848	biopolymer transport protein
FYA20_RS08530	COG0811	peptide transport
FYA20_RS08535	COG0626	cystathionine gamma-synthase activity
FYA20_RS08540	COG0586	Pfam SNARE associated Golgi protein
FYA20_RS08545	COG2207	Transcriptional regulator
FYA20_RS08550	COG1979	alcohol dehydrogenase
FYA20_RS08555	COG0656	L-ascorbic acid biosynthetic process
FYA20_RS08565	COG4238	major outer membrane lipoprotein
FYA20_RS08570	COG1032	radical SAM domain protein
FYA20_RS08575	COG2186	Transcriptional regulator
FYA20_RS08580	COG0246	Mannitol dehydrogenase
FYA20_RS08585	COG1063	alcohol dehydrogenase
FYA20_RS08590	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FYA20_RS08610	COG2132	Multicopper oxidase
FYA20_RS08615	COG0204	Acyl-transferase
FYA20_RS08620	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FYA20_RS08625	COG4166	transmembrane transport
FYA20_RS08630	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
FYA20_RS08635	COG3111	PFAM Bacterial OB fold (BOF) protein
FYA20_RS08640	COG0745	RESPONSE REGULATOR receiver
FYA20_RS08645	COG0642	Histidine kinase
FYA20_RS08660	COG2249	NAD(P)H dehydrogenase (quinone) activity
FYA20_RS08665	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
FYA20_RS08670	COG1737	Transcriptional regulator
FYA20_RS08680	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYA20_RS08685	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYA20_RS08690	COG1120	ATPase activity
FYA20_RS08695	COG4774	siderophore transport
FYA20_RS08700	COG0187	DNA topoisomerase II activity
FYA20_RS08705	COG3150	esterase
FYA20_RS08710	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FYA20_RS08715	COG3151	Protein conserved in bacteria
FYA20_RS08720	COG0494	nUDIX hydrolase
FYA20_RS08725	COG1538	Outer membrane efflux protein
FYA20_RS08735	COG0754	glutathionylspermidine amidase activity
FYA20_RS08745	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
FYA20_RS08755	COG3384	dioxygenase
FYA20_RS08765	COG3539	Fimbrial protein
FYA20_RS08770	COG3188	usher protein
FYA20_RS08775	COG3121	Chaperone
FYA20_RS08780	COG3539	Fimbrial protein
FYA20_RS08800	COG1585	Membrane protein implicated in regulation of membrane protease activity
FYA20_RS08805	COG2268	Band 7 protein
FYA20_RS08820	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
FYA20_RS08825	COG3025	triphosphatase activity
FYA20_RS08830	COG4991	sh3 domain protein
FYA20_RS08845	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FYA20_RS08865	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
FYA20_RS08870	COG0471	metal ion transport
FYA20_RS08880	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FYA20_RS08885	COG0358	DNA primase activity
FYA20_RS08890	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FYA20_RS08905	COG2375	cellular response to nickel ion
FYA20_RS08915	COG1695	Transcriptional regulator
FYA20_RS08920	COG0840	transmembrane signaling receptor activity
FYA20_RS08930	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FYA20_RS08935	COG1609	Transcriptional regulator
FYA20_RS08940	COG3250	beta-galactosidase activity
FYA20_RS08945	COG2731	YhcH YjgK YiaL family protein
FYA20_RS08950	COG0531	amino acid
FYA20_RS08960	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
FYA20_RS08960	COG3408	Glycogen debranching enzyme
FYA20_RS08965	COG1902	pentaerythritol trinitrate reductase activity
FYA20_RS08965	COG0446	pyridine nucleotide-disulphide oxidoreductase
FYA20_RS08970	COG5499	transcription regulator containing HTH domain
FYA20_RS08985	COG1451	nucleotide metabolic process
FYA20_RS08990	COG2949	membrane
FYA20_RS08995	COG0673	inositol 2-dehydrogenase activity
FYA20_RS09000	COG0861	Integral membrane protein TerC family
FYA20_RS09015	COG2721	sulfolactate sulfo-lyase activity
FYA20_RS09025	COG2271	Major facilitator Superfamily
FYA20_RS09030	COG2186	Transcriptional regulator
FYA20_RS09035	COG0586	Pfam SNARE associated Golgi protein
FYA20_RS09045	COG1422	Protein of unknown function (DUF1090)
FYA20_RS09050	COG4575	ribosome binding
FYA20_RS09055	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
FYA20_RS09065	COG2259	Doxx family
FYA20_RS09070	COG0435	Glutathione S-transferase
FYA20_RS09075	COG3152	Membrane
FYA20_RS09080	COG0583	DNA-binding transcription factor activity
FYA20_RS09085	COG1741	Belongs to the pirin family
FYA20_RS09100	COG0814	amino acid
FYA20_RS09105	COG1760	l-serine dehydratase
FYA20_RS09110	COG0251	oxidation-reduction process
FYA20_RS09115	COG1882	Formate acetyltransferase
FYA20_RS09120	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FYA20_RS09130	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FYA20_RS09135	COG0583	DNA-binding transcription factor activity
FYA20_RS09150	COG1929	Belongs to the glycerate kinase type-1 family
FYA20_RS09155	COG2084	Dehydrogenase
FYA20_RS09165	COG2271	Major facilitator Superfamily
FYA20_RS09170	COG2721	sulfolactate sulfo-lyase activity
FYA20_RS09175	COG2002	toxin-antitoxin pair type II binding
FYA20_RS09185	COG1349	DNA-binding transcription factor activity
FYA20_RS09195	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYA20_RS09205	COG3716	PTS system mannose fructose sorbose family IID component
FYA20_RS09210	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA20_RS09215	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FYA20_RS09220	COG2222	sugar isomerase
FYA20_RS09230	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYA20_RS09235	COG3715	PTS system
FYA20_RS09240	COG3716	PTS system mannose fructose sorbose family IID component
FYA20_RS09245	COG0363	glucosamine-6-phosphate deaminase activity
FYA20_RS09250	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
FYA20_RS09270	COG2823	Periplasmic or secreted lipoprotein
FYA20_RS09275	COG0701	Predicted permease
FYA20_RS09280	COG0702	epimerase
FYA20_RS09285	COG0693	protein deglycase activity
FYA20_RS09300	COG3153	acetyltransferase
FYA20_RS09305	COG3154	lipid carrier protein
FYA20_RS09310	COG0826	peptidase U32
FYA20_RS09315	COG0826	peptidase U32
FYA20_RS09320	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FYA20_RS09325	COG0814	amino acid
FYA20_RS09330	COG0513	Belongs to the DEAD box helicase family
FYA20_RS09370	COG0195	Participates in both transcription termination and antitermination
FYA20_RS09390	COG2194	sulfuric ester hydrolase activity
FYA20_RS09400	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FYA20_RS09410	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FYA20_RS09415	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FYA20_RS09425	COG1534	Rna-binding protein
FYA20_RS09430	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FYA20_RS09435	COG2027	D-alanyl-D-alanine carboxypeptidase
FYA20_RS09445	COG0697	spore germination
FYA20_RS09460	COG0142	geranyltranstransferase activity
FYA20_RS09465	COG3423	Transcriptional regulator
FYA20_RS09475	COG5007	Belongs to the BolA IbaG family
FYA20_RS09480	COG3113	response to antibiotic
FYA20_RS09485	COG2854	intermembrane phospholipid transfer
FYA20_RS09490	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FYA20_RS09495	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FYA20_RS09500	COG1127	ABC transporter
FYA20_RS09505	COG0530	calcium, potassium:sodium antiporter activity
FYA20_RS09510	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
FYA20_RS09510	COG0517	IMP dehydrogenase activity
FYA20_RS09515	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
FYA20_RS09520	COG3117	lipopolysaccharide transmembrane transporter activity
FYA20_RS09525	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
FYA20_RS09530	COG1137	ATPase activity
FYA20_RS09535	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FYA20_RS09540	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FYA20_RS09555	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA20_RS09560	COG0515	serine threonine protein kinase
FYA20_RS09570	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
FYA20_RS09575	COG2198	Histidine kinase
FYA20_RS09575	COG0784	Response regulator, receiver
FYA20_RS09575	COG5002	protein histidine kinase activity
FYA20_RS09580	COG1242	4 iron, 4 sulfur cluster binding
FYA20_RS09585	COG0070	glutamate synthase
FYA20_RS09585	COG0067	glutamate synthase
FYA20_RS09585	COG0069	glutamate synthase activity
FYA20_RS09590	COG0493	'glutamate synthase
FYA20_RS09595	COG2731	YhcH YjgK YiaL family protein
FYA20_RS09600	COG1940	carbohydrate kinase activity
FYA20_RS09625	COG2969	positive regulation of protein catabolic process
FYA20_RS09630	COG0625	glutathione transferase activity
FYA20_RS09645	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FYA20_RS09650	COG3105	Protein conserved in bacteria
FYA20_RS09655	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FYA20_RS09660	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FYA20_RS09680	COG2732	(Barnase) inhibitor
FYA20_RS09700	COG0583	DNA-binding transcription factor activity
FYA20_RS09705	COG0312	modulator of DNA gyrase
FYA20_RS09710	COG3164	Protein of unknown function
FYA20_RS09715	COG1530	ribonuclease E activity
FYA20_RS09725	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
FYA20_RS09730	COG1792	Involved in formation and maintenance of cell shape
FYA20_RS09735	COG1077	Cell shape determining protein MreB Mrl
FYA20_RS09740	COG2200	EAL domain
FYA20_RS09740	COG2199	diguanylate cyclase activity
FYA20_RS09745	COG0604	alcohol dehydrogenase
FYA20_RS09755	COG0511	ligase activity, forming carbon-carbon bonds
FYA20_RS09760	COG0439	Biotin carboxylase
FYA20_RS09770	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYA20_RS09775	COG1172	Belongs to the binding-protein-dependent transport system permease family
FYA20_RS09780	COG1129	ABC transporter
FYA20_RS09785	COG1879	ABC-type sugar transport system periplasmic component
FYA20_RS09795	COG1349	DNA-binding transcription factor activity
FYA20_RS09800	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYA20_RS09805	COG3924	membrane
FYA20_RS09810	COG4145	pantothenate transmembrane transporter activity
FYA20_RS09820	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FYA20_RS09830	COG2189	Belongs to the N(4) N(6)-methyltransferase family
FYA20_RS09840	COG1309	transcriptional regulator
FYA20_RS09845	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA20_RS09850	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FYA20_RS09860	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA20_RS09865	COG4597	amino acid ABC transporter
FYA20_RS09870	COG0765	amino acid transport
FYA20_RS09875	COG1126	abc transporter atp-binding protein
FYA20_RS09915	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FYA20_RS09935	COG0551	DNA topoisomerase type I activity
FYA20_RS09945	COG0758	DNA mediated transformation
FYA20_RS09965	COG0569	domain protein
FYA20_RS09975	COG3036	rescue of stalled ribosome
FYA20_RS09980	COG0789	Transcriptional regulator
FYA20_RS10020	COG0201	protein transport
FYA20_RS10110	COG0089	rRNA binding
FYA20_RS10135	COG3409	Peptidoglycan-binding domain 1 protein
FYA20_RS10135	COG3267	Type II secretory pathway component ExeA
FYA20_RS10140	COG3031	protein transport across the cell outer membrane
FYA20_RS10145	COG1450	Type ii and iii secretion system protein
FYA20_RS10150	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FYA20_RS10155	COG1459	type II secretion system
FYA20_RS10160	COG2165	general secretion pathway protein
FYA20_RS10165	COG2165	general secretion pathway protein
FYA20_RS10170	COG2165	general secretion pathway protein
FYA20_RS10175	COG4795	General secretion pathway protein
FYA20_RS10180	COG3156	type II secretion system protein K
FYA20_RS10185	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FYA20_RS10190	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FYA20_RS10195	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
FYA20_RS10200	COG2193	ferroxidase activity
FYA20_RS10205	COG2906	2 iron, 2 sulfur cluster binding
FYA20_RS10210	COG3979	chitinase
FYA20_RS10250	COG2964	Protein conserved in bacteria
FYA20_RS10255	COG0545	Peptidyl-prolyl cis-trans isomerase
FYA20_RS10265	COG1047	Peptidyl-prolyl cis-trans
FYA20_RS10270	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
FYA20_RS10285	COG0488	(ABC) transporter
FYA20_RS10290	COG0429	hydrolase of the alpha beta-hydrolase fold
FYA20_RS10300	COG3954	Phosphoribulokinase
FYA20_RS10305	COG1765	OsmC-like protein
FYA20_RS10310	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FYA20_RS10315	COG1289	transmembrane transporter activity
FYA20_RS10320	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FYA20_RS10325	COG0512	Glutamine amidotransferase of anthranilate synthase
FYA20_RS10330	COG2184	nucleotidyltransferase activity
FYA20_RS10340	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FYA20_RS10355	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FYA20_RS10360	COG2146	nitrite reductase [NAD(P)H] activity
FYA20_RS10365	COG2116	formate transmembrane transporter activity
FYA20_RS10380	COG0626	cystathionine gamma-synthase activity
FYA20_RS10395	COG1735	metal-dependent hydrolase with the TIM-barrel fold
FYA20_RS10400	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
FYA20_RS10405	COG3457	Alanine racemase
FYA20_RS10415	COG2188	Transcriptional regulator
FYA20_RS10425	COG0180	Tryptophanyl-tRNA synthetase
FYA20_RS10430	COG0546	phosphoglycolate phosphatase activity
FYA20_RS10435	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FYA20_RS10440	COG0338	D12 class N6 adenine-specific DNA methyltransferase
FYA20_RS10445	COG3266	domain, Protein
FYA20_RS10460	COG4796	Type ii and iii secretion system protein
FYA20_RS10475	COG3166	PFAM Fimbrial assembly family protein
FYA20_RS10480	COG4972	Pilus assembly protein
FYA20_RS10485	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FYA20_RS10490	COG0494	nUDIX hydrolase
FYA20_RS10500	COG1011	Hydrolase
FYA20_RS10505	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
FYA20_RS10515	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
FYA20_RS10535	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FYA20_RS10540	COG2183	response to ionizing radiation
FYA20_RS10545	COG1918	ferrous iron import across plasma membrane
FYA20_RS10550	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
FYA20_RS10565	COG0596	Alpha beta hydrolase
FYA20_RS10580	COG2610	gluconate transmembrane transporter activity
FYA20_RS10585	COG1640	4-alpha-glucanotransferase
FYA20_RS10590	COG0058	SHG alpha-glucan phosphorylase activity
FYA20_RS10605	COG1690	Belongs to the RtcB family
FYA20_RS10610	COG4650	regulator
FYA20_RS10615	COG1349	DNA-binding transcription factor activity
FYA20_RS10630	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FYA20_RS10670	COG3188	usher protein
FYA20_RS10675	COG3121	Chaperone
FYA20_RS10685	COG0058	SHG alpha-glucan phosphorylase activity
FYA20_RS10710	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FYA20_RS10715	COG2095	MarC family integral membrane protein
FYA20_RS10720	COG2610	gluconate transmembrane transporter activity
FYA20_RS10725	COG3265	gluconokinase activity
FYA20_RS10730	COG1609	Transcriptional regulator
FYA20_RS10735	COG1741	Belongs to the pirin family
FYA20_RS10740	COG0673	inositol 2-dehydrogenase activity
FYA20_RS10745	COG1247	-acetyltransferase
FYA20_RS10750	COG3157	Type VI secretion system effector, Hcp
FYA20_RS10775	COG0405	Gamma-glutamyltransferase
FYA20_RS10785	COG0584	glycerophosphoryl diester phosphodiesterase
FYA20_RS10810	COG0410	ABC transporter
FYA20_RS10815	COG0411	ABC transporter
FYA20_RS10820	COG4177	L-phenylalanine transmembrane transporter activity
FYA20_RS10825	COG0559	Belongs to the binding-protein-dependent transport system permease family
FYA20_RS10830	COG0683	leucine binding
FYA20_RS10835	COG0456	acetyltransferase
FYA20_RS10840	COG0683	leucine binding
FYA20_RS10845	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FYA20_RS10850	COG2177	Part of the ABC transporter FtsEX involved in
FYA20_RS10855	COG2884	Cell division ATP-binding protein ftsE
FYA20_RS10860	COG0552	protein localization to endoplasmic reticulum
FYA20_RS10865	COG0742	ribosomal rna small subunit methyltransferase
FYA20_RS10870	COG3776	membrane
FYA20_RS10880	COG3714	YhhN family
FYA20_RS10895	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FYA20_RS10905	COG0477	Major facilitator Superfamily
FYA20_RS10910	COG0628	permease
FYA20_RS10915	COG2091	lysine biosynthetic process via aminoadipic acid
FYA20_RS10920	COG0747	negative chemotaxis
FYA20_RS10925	COG0601	transmembrane transport
FYA20_RS10930	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA20_RS10950	COG2188	Transcriptional regulator
FYA20_RS10960	COG3414	Phosphotransferase system galactitol-specific IIB component
FYA20_RS10965	COG3775	system Galactitol-specific IIC component
FYA20_RS10980	COG0191	fructose-bisphosphate aldolase activity
FYA20_RS10985	COG0842	Transport permease protein
FYA20_RS10990	COG0842	Transport permease protein
FYA20_RS10990	COG1129	ABC transporter
FYA20_RS10995	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA20_RS11010	COG2081	HI0933 family
FYA20_RS11015	COG0306	phosphate transporter
FYA20_RS11025	COG0589	response to stress
FYA20_RS11035	COG3104	oligopeptide transport
FYA20_RS11045	COG0339	signal peptide processing
FYA20_RS11050	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FYA20_RS11055	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FYA20_RS11065	COG1393	Belongs to the ArsC family
FYA20_RS11075	COG3065	identical protein binding
FYA20_RS11080	COG2197	response regulator
FYA20_RS11085	COG3720	iron ion transport
FYA20_RS11090	COG4771	TonB-dependent receptor
FYA20_RS11115	COG3721	Heme iron utilization protein
FYA20_RS11125	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYA20_RS11135	COG1285	pathogenesis
FYA20_RS11150	COG3247	response to pH
FYA20_RS11155	COG2771	luxR family
FYA20_RS11165	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA20_RS11170	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FYA20_RS11175	COG2207	Transcriptional regulator
FYA20_RS11180	COG2207	Transcriptional regulator
FYA20_RS11185	COG0076	glutamate decarboxylase activity
FYA20_RS11190	COG1858	cytochrome C peroxidase
FYA20_RS11200	COG2197	response regulator
FYA20_RS11205	COG0583	DNA-binding transcription factor activity
FYA20_RS11210	COG1295	ribonuclease BN
FYA20_RS11215	COG0477	Major facilitator Superfamily
FYA20_RS11220	COG2982	Protein involved in outer membrane biogenesis
FYA20_RS11225	COG2200	EAL domain
FYA20_RS11230	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYA20_RS11235	COG0612	Peptidase, M16
FYA20_RS11245	COG2199	diguanylate cyclase activity
FYA20_RS11245	COG2200	EAL domain
FYA20_RS11250	COG0457	Tetratricopeptide repeat
FYA20_RS11250	COG3118	belongs to the thioredoxin family
FYA20_RS11255	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
FYA20_RS11260	COG1215	transferase activity, transferring glycosyl groups
FYA20_RS11265	COG1215	transferase activity, transferring glycosyl groups
FYA20_RS11290	COG2194	sulfuric ester hydrolase activity
FYA20_RS11305	COG0814	amino acid
FYA20_RS11310	COG4608	Belongs to the ABC transporter superfamily
FYA20_RS11315	COG0444	Belongs to the ABC transporter superfamily
FYA20_RS11320	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA20_RS11325	COG0601	transmembrane transport
FYA20_RS11335	COG0747	negative chemotaxis
FYA20_RS11345	COG2194	sulfuric ester hydrolase activity
FYA20_RS11350	COG2223	nitrite transmembrane transporter activity
FYA20_RS11360	COG2818	Glycosylase
FYA20_RS11365	COG0456	acetyltransferase
FYA20_RS11370	COG0243	molybdopterin cofactor binding
FYA20_RS11375	COG2885	chlorophyll binding
FYA20_RS11390	COG2944	sequence-specific DNA binding
FYA20_RS11395	COG1278	Cold shock
FYA20_RS11420	COG3274	enterobacterial common antigen metabolic process
FYA20_RS11425	COG4682	membrane
FYA20_RS11430	COG4682	membrane
FYA20_RS11435	COG1070	Carbohydrate kinase
FYA20_RS11445	COG4213	ABC transporter substrate-binding protein
FYA20_RS11455	COG4214	carbohydrate transport
FYA20_RS11460	COG1609	Transcriptional regulator
FYA20_RS11460	COG2207	Transcriptional regulator
FYA20_RS11465	COG2992	FlgJ-related protein
FYA20_RS11470	COG0366	Alpha amylase catalytic
FYA20_RS11475	COG3977	Valine--pyruvate aminotransferase
FYA20_RS11480	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FYA20_RS11485	COG1414	Transcriptional regulator
FYA20_RS11495	COG2731	YhcH YjgK YiaL family protein
FYA20_RS11505	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FYA20_RS11510	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FYA20_RS11515	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FYA20_RS11520	COG1070	Carbohydrate kinase
FYA20_RS11525	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
FYA20_RS11530	COG3623	hexulose-6-phosphate isomerase
FYA20_RS11535	COG0235	Class ii aldolase
FYA20_RS11540	COG1012	belongs to the aldehyde dehydrogenase family
FYA20_RS11550	COG1454	alcohol dehydrogenase
FYA20_RS11555	COG3276	selenocysteine insertion sequence binding
FYA20_RS11565	COG0625	glutathione transferase activity
FYA20_RS11570	COG1566	PFAM secretion protein HlyD family protein
FYA20_RS11580	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA20_RS11580	COG2213	PTS system mannitol-specific
FYA20_RS11590	COG3722	fumarate hydratase activity
FYA20_RS11610	COG5295	Hep Hag repeat protein
FYA20_RS11615	COG1620	l-lactate permease
FYA20_RS11620	COG2186	Transcriptional regulator
FYA20_RS11630	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FYA20_RS11635	COG1045	serine acetyltransferase
FYA20_RS11650	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FYA20_RS11655	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FYA20_RS11665	COG4942	peptidase
FYA20_RS11670	COG2861	carbohydrate metabolic process
FYA20_RS11675	COG1216	Glycosyl transferase, family 2
FYA20_RS11685	COG0156	8-amino-7-oxononanoate synthase activity
FYA20_RS11695	COG0859	PFAM glycosyl transferase family 9
FYA20_RS11700	COG0859	PFAM glycosyl transferase family 9
FYA20_RS11705	COG3307	-O-antigen
FYA20_RS11710	COG1216	Glycosyl transferase, family 2
FYA20_RS11715	COG1442	glycosyl transferase family 8
FYA20_RS11720	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FYA20_RS11735	COG0515	serine threonine protein kinase
FYA20_RS11740	COG0438	transferase activity, transferring glycosyl groups
FYA20_RS11745	COG0859	PFAM glycosyl transferase family 9
FYA20_RS11750	COG1519	Transferase
FYA20_RS11780	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FYA20_RS11805	COG1561	YicC-like family, N-terminal region
FYA20_RS11810	COG3645	SOS response
FYA20_RS11815	COG2860	membrane
FYA20_RS11825	COG0194	GDP metabolic process
FYA20_RS11835	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FYA20_RS11840	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FYA20_RS11845	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FYA20_RS11850	COG0786	glutamate:sodium symporter activity
FYA20_RS11855	COG2233	PERMEase
FYA20_RS11860	COG2982	Protein involved in outer membrane biogenesis
FYA20_RS11870	COG1940	carbohydrate kinase activity
FYA20_RS11885	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYA20_RS11885	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYA20_RS11890	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYA20_RS11895	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYA20_RS11895	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYA20_RS11895	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA20_RS11900	COG3711	transcriptional antiterminator
FYA20_RS11905	COG1501	Belongs to the glycosyl hydrolase 31 family
FYA20_RS11910	COG2211	Major facilitator Superfamily
FYA20_RS11935	COG0697	spore germination
FYA20_RS11940	COG1464	Belongs to the NlpA lipoprotein family
FYA20_RS11960	COG2252	PERMEase
FYA20_RS11970	COG2271	Major facilitator Superfamily
FYA20_RS11975	COG2271	Major facilitator Superfamily
FYA20_RS11980	COG3851	Histidine kinase
FYA20_RS11985	COG2197	response regulator
FYA20_RS12000	COG0440	acetolactate synthase activity
FYA20_RS12005	COG0028	Belongs to the TPP enzyme family
FYA20_RS12015	COG2814	Major facilitator Superfamily
FYA20_RS12030	COG2149	membrane
FYA20_RS12035	COG3119	arylsulfatase activity
FYA20_RS12040	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FYA20_RS12045	COG2207	Transcriptional regulator
FYA20_RS12065	COG5645	(Lipo)protein
FYA20_RS12070	COG0823	Involved in the tonB-independent uptake of proteins
FYA20_RS12075	COG0644	oxidoreductase
FYA20_RS12080	COG2271	Major facilitator Superfamily
FYA20_RS12090	COG0800	Aldolase
FYA20_RS12095	COG3734	2-keto-3-deoxy-galactonokinase
FYA20_RS12100	COG2186	Transcriptional regulator
FYA20_RS12110	COG0561	phosphatase activity
FYA20_RS12115	COG3753	Protein conserved in bacteria
FYA20_RS12120	COG0187	DNA topoisomerase II activity
FYA20_RS12130	COG0592	DNA-directed DNA polymerase activity
FYA20_RS12180	COG0814	amino acid
FYA20_RS12190	COG0583	DNA-binding transcription factor activity
FYA20_RS12195	COG2091	lysine biosynthetic process via aminoadipic acid
FYA20_RS12200	COG0431	NADPH-dependent FMN reductase
FYA20_RS12205	COG2252	PERMEase
FYA20_RS12210	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FYA20_RS12220	COG0363	glucosamine-6-phosphate deaminase activity
FYA20_RS12225	COG2382	esterase
FYA20_RS12230	COG4580	involved in the transport of maltose and maltodextrins
FYA20_RS12235	COG2723	6-phospho-beta-galactosidase activity
FYA20_RS12240	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYA20_RS12240	COG1263	PTS System
FYA20_RS12240	COG2190	(PTS) system
FYA20_RS12245	COG3711	transcriptional antiterminator
FYA20_RS12250	COG0704	Plays a role in the regulation of phosphate uptake
FYA20_RS12255	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FYA20_RS12260	COG0581	inorganic phosphate transmembrane transporter activity
FYA20_RS12265	COG0573	inorganic phosphate transmembrane transporter activity
FYA20_RS12270	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FYA20_RS12325	COG3312	ion transport
FYA20_RS12340	COG0716	FMN binding
FYA20_RS12345	COG1522	sequence-specific DNA binding
FYA20_RS12375	COG1129	ABC transporter
FYA20_RS12380	COG1172	Belongs to the binding-protein-dependent transport system permease family
FYA20_RS12385	COG1879	ABC-type sugar transport system periplasmic component
FYA20_RS12390	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYA20_RS12395	COG1609	Transcriptional regulator
FYA20_RS12400	COG0477	Major facilitator Superfamily
FYA20_RS12405	COG2186	Transcriptional regulator
FYA20_RS12445	COG3085	chromosome segregation
FYA20_RS12450	COG0606	chelatase, subunit chli
FYA20_RS12470	COG3978	acetolactate synthase activity
FYA20_RS12475	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FYA20_RS12485	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FYA20_RS12490	COG0583	DNA-binding transcription factor activity
FYA20_RS12500	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FYA20_RS12505	COG0210	DNA helicase
FYA20_RS12520	COG3118	belongs to the thioredoxin family
FYA20_RS12530	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FYA20_RS12535	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FYA20_RS12540	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
FYA20_RS12545	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FYA20_RS12550	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FYA20_RS12555	COG1088	dTDP-glucose 4,6-dehydratase activity
FYA20_RS12560	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
FYA20_RS12565	COG0456	acetyltransferase
FYA20_RS12570	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FYA20_RS12575	COG2244	polysaccharide biosynthetic process
FYA20_RS12580	COG1819	glycosyl
FYA20_RS12595	COG1113	amino acid transport
FYA20_RS12620	COG0641	radical SAM
FYA20_RS12625	COG3119	arylsulfatase activity
FYA20_RS12640	COG3071	HemY protein
FYA20_RS12645	COG2959	enzyme of heme biosynthesis
FYA20_RS12650	COG1587	Uroporphyrinogen-III synthase
FYA20_RS12655	COG0181	hydroxymethylbilane synthase activity
FYA20_RS12660	COG3072	Adenylate cyclase
FYA20_RS12680	COG5567	small periplasmic lipoprotein
FYA20_RS12690	COG3159	Protein conserved in bacteria
FYA20_RS12700	COG1011	Hydrolase
FYA20_RS12705	COG0210	DNA helicase
FYA20_RS12710	COG1912	Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase
FYA20_RS12715	COG3698	Phosphodiester glycosidase
FYA20_RS12720	COG0598	Magnesium transport protein CorA
FYA20_RS12735	COG2962	Rard protein
FYA20_RS12740	COG2050	protein possibly involved in aromatic compounds catabolism
FYA20_RS12745	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
FYA20_RS12750	COG0514	ATP-dependent DNA helicase (RecQ)
FYA20_RS12755	COG1280	lysine exporter protein (LysE YggA)
FYA20_RS12760	COG1280	lysine exporter protein (LysE YggA)
FYA20_RS12765	COG2267	carboxylic ester hydrolase activity
FYA20_RS12770	COG0561	phosphatase activity
FYA20_RS12775	COG0697	spore germination
FYA20_RS12780	COG0583	DNA-binding transcription factor activity
FYA20_RS12785	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FYA20_RS12800	COG3157	Type VI secretion system effector, Hcp
FYA20_RS12805	COG3157	Type VI secretion system effector, Hcp
FYA20_RS12815	COG1263	PTS System
FYA20_RS12815	COG2190	(PTS) system
FYA20_RS12815	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYA20_RS12820	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FYA20_RS12825	COG1737	Transcriptional regulator
FYA20_RS12830	COG0583	DNA-binding transcription factor activity
FYA20_RS12835	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
FYA20_RS12845	COG0549	Belongs to the carbamate kinase family
FYA20_RS12850	COG1304	FMN binding
FYA20_RS12855	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FYA20_RS12865	COG1335	isochorismatase
FYA20_RS12870	COG0412	Dienelactone hydrolase
FYA20_RS12875	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
FYA20_RS12895	COG0800	Aldolase
FYA20_RS12900	COG3734	2-keto-3-deoxy-galactonokinase
FYA20_RS12905	COG1414	Transcriptional regulator
FYA20_RS12910	COG1322	Protein conserved in bacteria
FYA20_RS12920	COG3165	ubiquinone biosynthetic process from chorismate
FYA20_RS12930	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FYA20_RS12940	COG0805	protein transport
FYA20_RS12955	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FYA20_RS12960	COG0543	2 iron, 2 sulfur cluster binding
FYA20_RS12980	COG1739	Uncharacterized protein family UPF0029
FYA20_RS12985	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FYA20_RS12990	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
FYA20_RS13020	COG1763	Mo-molybdopterin cofactor biosynthetic process
FYA20_RS13025	COG0746	molybdenum cofactor guanylyltransferase activity
FYA20_RS13030	COG3084	Protein conserved in bacteria
FYA20_RS13035	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FYA20_RS13040	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FYA20_RS13045	COG5339	Protein conserved in bacteria
FYA20_RS13050	COG0204	Acyl-transferase
FYA20_RS13060	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FYA20_RS13060	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FYA20_RS13075	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FYA20_RS13085	COG2204	response regulator
FYA20_RS13090	COG3852	Histidine kinase
FYA20_RS13095	COG0174	glutamine synthetase
FYA20_RS13100	COG1217	gtp-binding protein TYPA
FYA20_RS13105	COG1349	DNA-binding transcription factor activity
FYA20_RS13110	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYA20_RS13115	COG2084	Dehydrogenase
FYA20_RS13120	COG3684	Belongs to the aldolase LacD family
FYA20_RS13125	COG1063	alcohol dehydrogenase
FYA20_RS13135	COG0477	Major facilitator Superfamily
FYA20_RS13145	COG1011	Hydrolase
FYA20_RS13160	COG0456	acetyltransferase
FYA20_RS13170	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
FYA20_RS13205	COG2864	formate dehydrogenase
FYA20_RS13210	COG0437	4 iron, 4 sulfur cluster binding
FYA20_RS13270	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FYA20_RS13280	COG2258	MOSC domain
FYA20_RS13285	COG2205	protein histidine kinase activity
FYA20_RS13290	COG0745	RESPONSE REGULATOR receiver
FYA20_RS13295	COG3678	ATP-independent chaperone mediated protein folding
FYA20_RS13310	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
FYA20_RS13330	COG3152	Membrane
FYA20_RS13335	COG3691	Protein conserved in bacteria
FYA20_RS13340	COG0589	response to stress
FYA20_RS13350	COG1494	fructose-1,6-bisphosphatase
FYA20_RS13360	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FYA20_RS13375	COG1575	Belongs to the MenA family. Type 1 subfamily
FYA20_RS13390	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FYA20_RS13395	COG1609	Transcriptional regulator
FYA20_RS13400	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FYA20_RS13410	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
FYA20_RS13420	COG0626	cystathionine gamma-synthase activity
FYA20_RS13425	COG0527	aspartate kinase activity
FYA20_RS13425	COG0460	homoserine dehydrogenase
FYA20_RS13435	COG0737	Belongs to the 5'-nucleotidase family
FYA20_RS13440	COG0737	Belongs to the 5'-nucleotidase family
FYA20_RS13450	COG0737	Belongs to the 5'-nucleotidase family
FYA20_RS13455	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FYA20_RS13465	COG0697	spore germination
FYA20_RS13470	COG3738	Protein conserved in bacteria
FYA20_RS13475	COG0371	Dehydrogenase
FYA20_RS13480	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FYA20_RS13485	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA20_RS13485	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA20_RS13485	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FYA20_RS13490	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYA20_RS13495	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYA20_RS13500	COG1882	Formate acetyltransferase
FYA20_RS13505	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FYA20_RS13510	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FYA20_RS13515	COG2207	Transcriptional regulator
FYA20_RS13520	COG2194	sulfuric ester hydrolase activity
FYA20_RS13535	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FYA20_RS13540	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FYA20_RS13555	COG4948	Mandelate Racemase Muconate Lactonizing
FYA20_RS13560	COG2271	Major facilitator Superfamily
FYA20_RS13565	COG0583	DNA-binding transcription factor activity
FYA20_RS13575	COG1473	amidohydrolase
FYA20_RS13580	COG0477	Major facilitator Superfamily
FYA20_RS13630	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FYA20_RS13635	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
FYA20_RS13635	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
FYA20_RS13670	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FYA20_RS13675	COG0250	Participates in transcription elongation, termination and antitermination
FYA20_RS13710	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
FYA20_RS13720	COG2104	thiamine diphosphate biosynthetic process
FYA20_RS13725	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FYA20_RS13760	COG3068	Protein conserved in bacteria
FYA20_RS13775	COG3678	ATP-independent chaperone mediated protein folding
FYA20_RS13780	COG4191	Histidine kinase
FYA20_RS13785	COG2204	response regulator
FYA20_RS13790	COG0151	Belongs to the GarS family
FYA20_RS13795	COG0138	bifunctional purine biosynthesis protein purh
FYA20_RS13825	COG0456	acetyltransferase
FYA20_RS13835	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FYA20_RS13840	COG2224	Isocitrate lyase
FYA20_RS13850	COG1414	Transcriptional regulator
FYA20_RS13855	COG0646	methionine synthase
FYA20_RS13855	COG1410	methionine synthase
FYA20_RS13870	COG1283	sodium-dependent phosphate transmembrane transporter activity
FYA20_RS13915	COG1187	pseudouridine synthase activity
FYA20_RS13925	COG0527	aspartate kinase activity
FYA20_RS13950	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FYA20_RS13965	COG3833	ABC-type maltose transport systems, permease component
FYA20_RS13970	COG1175	transmembrane transport
FYA20_RS13975	COG2182	Extracellular solute-binding protein
FYA20_RS13980	COG3842	ATPase activity
FYA20_RS14010	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FYA20_RS14020	COG0534	Mate efflux family protein
FYA20_RS14025	COG3237	CsbD-like
FYA20_RS14030	COG0735	belongs to the Fur family
FYA20_RS14085	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
FYA20_RS14090	COG5532	Uncharacterized conserved protein (DUF2303)
FYA20_RS14125	COG3646	Phage regulatory protein
FYA20_RS14135	COG1846	Transcriptional regulator
FYA20_RS14145	COG4725	Belongs to the MT-A70-like family
FYA20_RS14155	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
FYA20_RS14165	COG1403	HNH endonuclease
FYA20_RS14200	COG3772	lysozyme
FYA20_RS14205	COG1846	Transcriptional regulator
FYA20_RS14250	COG0740	serine-type endopeptidase activity
FYA20_RS14325	COG5301	cellulose 1,4-beta-cellobiosidase activity
FYA20_RS14350	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FYA20_RS14360	COG0604	alcohol dehydrogenase
FYA20_RS14365	COG0305	Participates in initiation and elongation during chromosome replication
FYA20_RS14370	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FYA20_RS14375	COG1448	Aminotransferase
FYA20_RS14380	COG0567	Dehydrogenase, E1 component
FYA20_RS14390	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FYA20_RS14395	COG0045	succinate-CoA ligase (ADP-forming) activity
FYA20_RS14400	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FYA20_RS14405	COG0471	metal ion transport
FYA20_RS14410	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FYA20_RS14415	COG2204	response regulator
FYA20_RS14425	COG3700	Belongs to the class B bacterial acid phosphatase family
FYA20_RS14430	COG0432	Pfam Uncharacterised protein family UPF0047
FYA20_RS14435	COG2315	Protein conserved in bacteria
FYA20_RS14440	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FYA20_RS14445	COG0629	single-stranded DNA binding
FYA20_RS14455	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FYA20_RS14460	COG2207	Transcriptional regulator
FYA20_RS14465	COG0789	Transcriptional regulator
FYA20_RS14470	COG2252	PERMEase
FYA20_RS14475	COG0025	NhaP-type Na H and K H
FYA20_RS14480	COG0583	DNA-binding transcription factor activity
FYA20_RS14485	COG1380	Effector of murein hydrolase LrgA
FYA20_RS14490	COG1346	cytolysis
FYA20_RS14500	COG3162	membrane
FYA20_RS14505	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FYA20_RS14520	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
FYA20_RS14525	COG0437	4 iron, 4 sulfur cluster binding
FYA20_RS14530	COG3301	Polysulphide reductase, NrfD
FYA20_RS14535	COG1138	Cytochrome C-type biogenesis protein
FYA20_RS14540	COG3088	subunit of a heme lyase
FYA20_RS14545	COG4235	cytochrome complex assembly
FYA20_RS14550	COG1301	dicarboxylic acid transport
FYA20_RS14555	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
FYA20_RS14560	COG4608	Belongs to the ABC transporter superfamily
FYA20_RS14565	COG0444	Belongs to the ABC transporter superfamily
FYA20_RS14570	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA20_RS14575	COG0601	transmembrane transport
FYA20_RS14595	COG1289	transmembrane transporter activity
FYA20_RS14600	COG1566	PFAM secretion protein HlyD family protein
FYA20_RS14610	COG2015	COG2015, Alkyl sulfatase and related hydrolases
FYA20_RS14615	COG1940	carbohydrate kinase activity
FYA20_RS14620	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FYA20_RS14625	COG1172	Belongs to the binding-protein-dependent transport system permease family
FYA20_RS14630	COG1129	ABC transporter
FYA20_RS14635	COG1879	ABC-type sugar transport system periplasmic component
FYA20_RS14640	COG1737	Transcriptional regulator
FYA20_RS14645	COG0698	ribose 5-phosphate isomerase
FYA20_RS14655	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
FYA20_RS14660	COG0456	acetyltransferase
FYA20_RS14665	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
FYA20_RS14670	COG3454	Phosphonate metabolism
FYA20_RS14675	COG4778	phosphonate C-P lyase system protein PhnL
FYA20_RS14680	COG4107	phosphonate C-P lyase system protein PhnK
FYA20_RS14685	COG3627	carbon phosphorus lyase activity
FYA20_RS14690	COG3626	phosphonate metabolism
FYA20_RS14695	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
FYA20_RS14700	COG3624	Phosphonate C-P lyase system protein PhnG
FYA20_RS14705	COG2188	Transcriptional regulator
FYA20_RS14710	COG3639	organic phosphonate transmembrane transporter activity
FYA20_RS14715	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
FYA20_RS14725	COG2764	glyoxalase bleomycin resistance protein dioxygenase
FYA20_RS14730	COG2824	Alkylphosphonate utilization operon protein PhnA
FYA20_RS14745	COG0477	Major facilitator Superfamily
FYA20_RS14755	COG0642	Histidine kinase
FYA20_RS14760	COG0745	RESPONSE REGULATOR receiver
FYA20_RS14765	COG2194	sulfuric ester hydrolase activity
FYA20_RS14770	COG0531	amino acid
FYA20_RS14775	COG2207	Transcriptional regulator
FYA20_RS14780	COG1982	Orn Lys Arg decarboxylase major
FYA20_RS14785	COG2169	Transcriptional regulator
FYA20_RS14790	COG1486	melibiose metabolic process
FYA20_RS14795	COG3647	Membrane
FYA20_RS14800	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
FYA20_RS14800	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
FYA20_RS14805	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FYA20_RS14810	COG4565	transcriptional regulatory protein
FYA20_RS14815	COG3290	protein histidine kinase activity
FYA20_RS14820	COG3592	Divergent 4Fe-4S mono-cluster
FYA20_RS14825	COG2388	GCN5-related N-acetyl-transferase
FYA20_RS14840	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FYA20_RS14845	COG3104	oligopeptide transport
FYA20_RS14850	COG1982	Orn Lys Arg decarboxylase major
FYA20_RS14855	COG0531	amino acid
FYA20_RS14865	COG3710	Transcriptional regulator
FYA20_RS14880	COG1309	transcriptional regulator
FYA20_RS14885	COG4232	protein-disulfide reductase activity
FYA20_RS14895	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FYA20_RS14900	COG1027	Aspartate ammonia-lyase
FYA20_RS14905	COG3030	protein affecting phage T7 exclusion by the F plasmid
FYA20_RS14910	COG0531	amino acid
FYA20_RS14935	COG1509	lysine 2,3-aminomutase activity
FYA20_RS14945	COG5510	response to toxic substance
FYA20_RS14950	COG5510	response to toxic substance
FYA20_RS14955	COG2076	Multidrug Resistance protein
FYA20_RS14960	COG3040	lipid binding
FYA20_RS14965	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FYA20_RS14980	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FYA20_RS14985	COG1053	succinate dehydrogenase
FYA20_RS14995	COG0531	amino acid
FYA20_RS15000	COG3264	Mechanosensitive ion channel
FYA20_RS15000	COG1511	domain protein
FYA20_RS15035	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FYA20_RS15040	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
FYA20_RS15040	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FYA20_RS15045	COG0802	atpase or kinase
FYA20_RS15050	COG0860	N-Acetylmuramoyl-L-alanine amidase
FYA20_RS15070	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FYA20_RS15075	COG0330	HflC and HflK could
FYA20_RS15080	COG0330	HflC and HflK could
FYA20_RS15085	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
FYA20_RS15100	COG0557	exoribonuclease II activity
FYA20_RS15105	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FYA20_RS15110	COG3789	protein conserved in bacteria
FYA20_RS15115	COG1842	Phage shock protein A
FYA20_RS15125	COG3766	membrane
FYA20_RS15130	COG5463	Belongs to the UPF0441 family
FYA20_RS15135	COG0754	glutathionylspermidine amidase activity
FYA20_RS15140	COG1960	acyl-CoA dehydrogenase activity
FYA20_RS15150	COG3650	response to hydrogen peroxide
FYA20_RS15155	COG1073	alpha beta
FYA20_RS15170	COG3037	sugar-specific permease SgaT UlaA
FYA20_RS15175	COG3414	Phosphotransferase system galactitol-specific IIB component
FYA20_RS15215	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
FYA20_RS15240	COG2271	Major facilitator Superfamily
FYA20_RS15245	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FYA20_RS15250	COG4670	ketone body catabolic process
FYA20_RS15255	COG1024	Enoyl-CoA hydratase
FYA20_RS15270	COG1309	transcriptional regulator
FYA20_RS15275	COG3061	Opacity-associated protein A
FYA20_RS15280	COG0545	Peptidyl-prolyl cis-trans isomerase
FYA20_RS15285	COG1113	amino acid transport
FYA20_RS15295	COG0697	spore germination
FYA20_RS15300	COG0702	epimerase
FYA20_RS15305	COG1733	regulation of RNA biosynthetic process
FYA20_RS15310	COG0737	Belongs to the 5'-nucleotidase family
FYA20_RS15315	COG1218	3'(2'),5'-bisphosphate nucleotidase
FYA20_RS15320	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
FYA20_RS15330	COG1253	flavin adenine dinucleotide binding
FYA20_RS15340	COG0729	surface antigen
FYA20_RS15345	COG2911	Protein conserved in bacteria
FYA20_RS15350	COG2105	PFAM AIG2 family protein
FYA20_RS15355	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
FYA20_RS15360	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
FYA20_RS15365	COG1879	ABC-type sugar transport system periplasmic component
FYA20_RS15370	COG1129	ABC transporter
FYA20_RS15375	COG1172	Belongs to the binding-protein-dependent transport system permease family
FYA20_RS15380	COG1172	Belongs to the binding-protein-dependent transport system permease family
FYA20_RS15390	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FYA20_RS15395	COG3028	Belongs to the UPF0307 family
FYA20_RS15400	COG0312	modulator of DNA gyrase
FYA20_RS15405	COG3783	Cytochrome b(562)
FYA20_RS15410	COG0602	queuosine metabolic process
FYA20_RS15415	COG1328	CTP reductase activity
FYA20_RS15420	COG0366	Alpha amylase catalytic
FYA20_RS15425	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYA20_RS15425	COG1263	PTS System
FYA20_RS15430	COG1609	Transcriptional regulator
FYA20_RS15440	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FYA20_RS15445	COG0251	oxidation-reduction process
FYA20_RS15465	COG1438	arginine binding
FYA20_RS15470	COG1288	antiporter activity
FYA20_RS15475	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FYA20_RS15480	COG0549	Belongs to the carbamate kinase family
FYA20_RS15490	COG2731	YhcH YjgK YiaL family protein
FYA20_RS15495	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FYA20_RS15500	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
FYA20_RS15505	COG0456	acetyltransferase
FYA20_RS15515	COG0525	valine-tRNA ligase activity
FYA20_RS15520	COG2927	DNA polymerase III (CHI subunit)
FYA20_RS15530	COG0795	lipopolysaccharide-transporting ATPase activity
FYA20_RS15535	COG0795	lipopolysaccharide-transporting ATPase activity
FYA20_RS15540	COG0433	COG0433 Predicted ATPase
FYA20_RS15545	COG1064	alcohol dehydrogenase
FYA20_RS15575	COG1401	restriction endodeoxyribonuclease activity
FYA20_RS15605	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FYA20_RS15610	COG0582	viral genome integration into host DNA
FYA20_RS15615	COG4974	Belongs to the 'phage' integrase family
FYA20_RS15620	COG3539	Fimbrial protein
FYA20_RS15625	COG3539	Fimbrial protein
FYA20_RS15630	COG3121	Chaperone
FYA20_RS15635	COG3188	usher protein
FYA20_RS15640	COG3539	Fimbrial protein
FYA20_RS15645	COG3539	Fimbrial protein
FYA20_RS15650	COG3539	Fimbrial protein
FYA20_RS15665	COG0246	Mannitol dehydrogenase
FYA20_RS15670	COG2186	Transcriptional regulator
FYA20_RS15680	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FYA20_RS15680	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA20_RS15685	COG1461	Dihydroxyacetone kinase
FYA20_RS15690	COG2376	Dihydroxyacetone kinase
FYA20_RS15705	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FYA20_RS15720	COG1929	Belongs to the glycerate kinase type-1 family
FYA20_RS15725	COG2084	Dehydrogenase
FYA20_RS15730	COG3622	Belongs to the hyi family
FYA20_RS15735	COG3960	tartronate-semialdehyde synthase activity
FYA20_RS15740	COG3284	Transcriptional regulator
FYA20_RS15755	COG1757	Na H antiporter
FYA20_RS15760	COG0583	DNA-binding transcription factor activity
FYA20_RS15765	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FYA20_RS15770	COG0700	Nucleoside recognition
FYA20_RS15775	COG3366	ferrous iron transmembrane transporter activity
FYA20_RS15785	COG0477	Major facilitator Superfamily
FYA20_RS15800	COG1924	4 iron, 4 sulfur cluster binding
FYA20_RS15805	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
FYA20_RS15810	COG2733	membrane
FYA20_RS15820	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FYA20_RS15825	COG5457	Domain of unknown function (DUF1127)
FYA20_RS15835	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
FYA20_RS15840	COG0732	type I restriction modification DNA specificity domain
FYA20_RS15845	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
FYA20_RS15850	COG1715	Restriction endonuclease
FYA20_RS15865	COG0523	cobalamin synthesis protein
FYA20_RS15870	COG2879	small protein
FYA20_RS15875	COG1966	Carbon starvation protein
FYA20_RS15880	COG0840	transmembrane signaling receptor activity
FYA20_RS15885	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FYA20_RS15895	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FYA20_RS15900	COG0025	NhaP-type Na H and K H
FYA20_RS15905	COG1802	Transcriptional regulator
FYA20_RS15910	COG1063	alcohol dehydrogenase
FYA20_RS15925	COG1484	DNA-dependent DNA replication
FYA20_RS15940	COG2966	Psort location CytoplasmicMembrane, score
FYA20_RS15945	COG2197	response regulator
FYA20_RS15950	COG2197	response regulator
FYA20_RS15955	COG4114	ferric iron reductase
FYA20_RS15985	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
FYA20_RS15990	COG0456	acetyltransferase
FYA20_RS15995	COG1011	Hydrolase
FYA20_RS16000	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
FYA20_RS16030	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
FYA20_RS16035	COG5532	Uncharacterized conserved protein (DUF2303)
FYA20_RS16085	COG1846	Transcriptional regulator
FYA20_RS16095	COG4725	Belongs to the MT-A70-like family
FYA20_RS16105	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
FYA20_RS16115	COG1403	HNH endonuclease
FYA20_RS16195	COG0740	serine-type endopeptidase activity
FYA20_RS16265	COG5301	cellulose 1,4-beta-cellobiosidase activity
FYA20_RS16300	COG2823	Periplasmic or secreted lipoprotein
FYA20_RS16310	COG4667	esterase of the alpha-beta hydrolase superfamily
FYA20_RS16315	COG0084	hydrolase, TatD family'
FYA20_RS16320	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FYA20_RS16325	COG1328	CTP reductase activity
FYA20_RS16350	COG3550	peptidyl-serine autophosphorylation
FYA20_RS16360	COG3726	membrane protein affecting hemolysin expression
FYA20_RS16365	COG0560	Phosphoserine phosphatase
FYA20_RS16370	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
FYA20_RS16375	COG1056	cytidyltransferase-related domain
FYA20_RS16375	COG3172	ATPase kinase involved in NAD metabolism
FYA20_RS16380	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
FYA20_RS16390	COG0488	(ABC) transporter
FYA20_RS16395	COG0741	lytic transglycosylase activity
FYA20_RS16415	COG2207	Transcriptional regulator
FYA20_RS16415	COG3708	Transcriptional regulator
FYA20_RS16420	COG3045	CreA protein
FYA20_RS16425	COG0745	RESPONSE REGULATOR receiver
FYA20_RS16430	COG2205	protein histidine kinase activity
FYA20_RS16435	COG4452	Inner membrane protein CreD
FYA20_RS16440	COG0745	RESPONSE REGULATOR receiver
FYA20_RS16450	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
FYA20_RS16460	COG0527	aspartate kinase activity
FYA20_RS16460	COG0460	homoserine dehydrogenase
FYA20_RS16465	COG0083	homoserine kinase activity
FYA20_RS16470	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
FYA20_RS16485	COG1115	amino acid carrier protein
FYA20_RS16495	COG0521	Mo-molybdopterin cofactor biosynthetic process
FYA20_RS16500	COG1584	GPR1 FUN34 yaaH family protein
FYA20_RS16505	COG4735	regulation of single-species biofilm formation
FYA20_RS16535	COG3119	arylsulfatase activity
FYA20_RS16550	COG0583	DNA-binding transcription factor activity
FYA20_RS16565	COG0196	riboflavin kinase activity
FYA20_RS16580	COG1047	Peptidyl-prolyl cis-trans
FYA20_RS16605	COG0505	Belongs to the CarA family
FYA20_RS16610	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FYA20_RS16660	COG0644	oxidoreductase
FYA20_RS16665	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
FYA20_RS16670	COG2271	Major facilitator Superfamily
FYA20_RS16685	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
FYA20_RS16715	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FYA20_RS16720	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FYA20_RS16730	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FYA20_RS16735	COG0564	pseudouridine synthase activity
FYA20_RS16745	COG0417	DNA replication proofreading
FYA20_RS16750	COG0235	Class ii aldolase
FYA20_RS16765	COG4977	sequence-specific DNA binding
FYA20_RS16780	COG0586	Pfam SNARE associated Golgi protein
FYA20_RS16790	COG1178	ABC-type Fe3 transport system permease component
FYA20_RS16795	COG4143	(ABC) transporter
FYA20_RS16835	COG0583	DNA-binding transcription factor activity
FYA20_RS16840	COG0028	Belongs to the TPP enzyme family
FYA20_RS16845	COG0440	acetolactate synthase activity
FYA20_RS16855	COG1609	Transcriptional regulator
FYA20_RS16870	COG3116	cell division
FYA20_RS16875	COG0768	penicillin binding
FYA20_RS16880	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FYA20_RS16885	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FYA20_RS16900	COG0772	Belongs to the SEDS family
FYA20_RS16915	COG1181	Belongs to the D-alanine--D-alanine ligase family
FYA20_RS16920	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FYA20_RS16925	COG0849	cell division
FYA20_RS16930	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FYA20_RS16950	COG0494	nUDIX hydrolase
FYA20_RS16965	COG0237	dephospho-CoA kinase activity
FYA20_RS16975	COG1459	type II secretion system
FYA20_RS16980	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FYA20_RS16985	COG4969	Belongs to the N-Me-Phe pilin family
FYA20_RS16990	COG0157	Belongs to the NadC ModD family
FYA20_RS16995	COG3023	N-Acetylmuramoyl-L-alanine amidase
FYA20_RS17000	COG3725	Membrane protein required for beta-lactamase induction
FYA20_RS17005	COG1113	amino acid transport
FYA20_RS17010	COG3157	Type VI secretion system effector, Hcp
FYA20_RS17040	COG2186	Transcriptional regulator
FYA20_RS17045	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
FYA20_RS17050	COG0508	dehydrogenase complex catalyzes the overall conversion of
FYA20_RS17055	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FYA20_RS17060	COG3064	Membrane
FYA20_RS17065	COG1049	propionate catabolic process, 2-methylcitrate cycle
FYA20_RS17090	COG2132	Multicopper oxidase
FYA20_RS17095	COG4993	Dehydrogenase
FYA20_RS17100	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
FYA20_RS17105	COG0288	reversible hydration of carbon dioxide
FYA20_RS17110	COG1131	(ABC) transporter
FYA20_RS17115	COG0842	Transport permease protein
FYA20_RS17120	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA20_RS17125	COG0726	polysaccharide deacetylase
FYA20_RS17135	COG5464	transposase or invertase
FYA20_RS17140	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
FYA20_RS17150	COG3539	Fimbrial protein
FYA20_RS17155	COG3539	Fimbrial protein
FYA20_RS17160	COG3539	Fimbrial protein
FYA20_RS17165	COG3539	Fimbrial protein
FYA20_RS17170	COG3188	usher protein
FYA20_RS17175	COG3121	Chaperone
FYA20_RS17180	COG3539	Fimbrial protein
FYA20_RS17185	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FYA20_RS17190	COG0617	tRNA 3'-terminal CCA addition
FYA20_RS17195	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FYA20_RS17200	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FYA20_RS17210	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
FYA20_RS17215	COG1643	Atp-dependent helicase
FYA20_RS17220	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FYA20_RS17225	COG4774	siderophore transport
FYA20_RS17230	COG1120	ATPase activity
FYA20_RS17235	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FYA20_RS17240	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYA20_RS17265	COG2860	membrane
FYA20_RS17270	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FYA20_RS17285	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FYA20_RS17290	COG3835	regulator
FYA20_RS17310	COG0024	Methionine aminopeptidase
FYA20_RS17335	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FYA20_RS17340	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FYA20_RS17345	COG0575	Belongs to the CDS family
FYA20_RS17350	COG0750	zinc metalloprotease
FYA20_RS17360	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
FYA20_RS17365	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FYA20_RS17390	COG0587	DNA-directed DNA polymerase activity
FYA20_RS17400	COG1982	Orn Lys Arg decarboxylase major
FYA20_RS17405	COG0346	lactoylglutathione lyase activity
FYA20_RS17410	COG0037	tRNA processing
FYA20_RS17415	COG4568	rho-dependent transcription termination
FYA20_RS17425	COG4681	YaeQ
FYA20_RS17430	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
FYA20_RS17435	COG3015	lipoprotein NlpE involved in copper resistance
FYA20_RS17440	COG0791	NLP P60 protein
FYA20_RS17450	COG1720	tRNA m6t6A37 methyltransferase activity
FYA20_RS17460	COG1464	Belongs to the NlpA lipoprotein family
FYA20_RS17465	COG2011	ABC-type metal ion transport system permease component
FYA20_RS17470	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FYA20_RS17475	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FYA20_RS17510	COG0656	L-ascorbic acid biosynthetic process
FYA20_RS17515	COG0583	DNA-binding transcription factor activity
FYA20_RS17525	COG2226	methyltransferase
FYA20_RS17530	COG1388	LysM domain
FYA20_RS17530	COG0741	lytic transglycosylase activity
FYA20_RS17540	COG2226	methyltransferase
FYA20_RS17550	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FYA20_RS17645	COG3501	Rhs element vgr protein
FYA20_RS17695	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FYA20_RS17705	COG1960	acyl-CoA dehydrogenase activity
FYA20_RS17715	COG0121	glutamine amidotransferase
FYA20_RS17720	COG3034	peptidoglycan biosynthetic process
FYA20_RS17725	COG0791	NLP P60 protein
FYA20_RS17730	COG1943	Transposase
FYA20_RS17755	COG2161	toxin-antitoxin pair type II binding
FYA20_RS17765	COG0454	-acetyltransferase
FYA20_RS17770	COG1690	Belongs to the RtcB family
FYA20_RS17775	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
FYA20_RS17780	COG2195	Cleaves the N-terminal amino acid of tripeptides
FYA20_RS17800	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FYA20_RS17820	COG0582	viral genome integration into host DNA
FYA20_RS17850	COG3477	response to acidic pH
FYA20_RS17860	COG0727	PFAM Uncharacterised protein family (UPF0153)
FYA20_RS17920	COG1902	pentaerythritol trinitrate reductase activity
FYA20_RS17925	COG1073	alpha beta
FYA20_RS17930	COG0583	DNA-binding transcription factor activity
FYA20_RS17940	COG0667	Aldo Keto reductase
FYA20_RS17945	COG0656	L-ascorbic acid biosynthetic process
FYA20_RS17950	COG1388	LysM domain
FYA20_RS17960	COG3708	Transcriptional regulator
FYA20_RS17960	COG2207	Transcriptional regulator
FYA20_RS17965	COG0656	L-ascorbic acid biosynthetic process
FYA20_RS17970	COG3059	membrane
FYA20_RS17980	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FYA20_RS17985	COG2207	Transcriptional regulator
FYA20_RS17990	COG0247	lactate metabolic process
FYA20_RS17995	COG1139	Iron-sulfur cluster binding protein
FYA20_RS18000	COG1556	Lactate utilization protein
FYA20_RS18010	COG3468	outer membrane autotransporter barrel domain protein
FYA20_RS18025	COG2771	luxR family
FYA20_RS18025	COG2200	EAL domain
FYA20_RS18030	COG0582	viral genome integration into host DNA
FYA20_RS18055	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FYA20_RS18060	COG2771	luxR family
FYA20_RS18060	COG2200	EAL domain
FYA20_RS18065	COG0583	DNA-binding transcription factor activity
FYA20_RS18075	COG0666	response to abiotic stimulus
FYA20_RS18085	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FYA20_RS18090	COG1304	FMN binding
FYA20_RS18100	COG0549	Belongs to the carbamate kinase family
FYA20_RS18105	COG0402	S-adenosylhomocysteine deaminase activity
FYA20_RS18110	COG1064	alcohol dehydrogenase
FYA20_RS18120	COG1280	lysine exporter protein (LysE YggA)
FYA20_RS18130	COG3829	transcription factor binding
FYA20_RS18135	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
FYA20_RS18140	COG0372	Belongs to the citrate synthase family
FYA20_RS18145	COG2079	MmgE PrpD family protein
FYA20_RS18150	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FYA20_RS18155	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
FYA20_RS18160	COG0402	S-adenosylhomocysteine deaminase activity
FYA20_RS18165	COG0110	maltose O-acetyltransferase activity
FYA20_RS18170	COG2223	nitrite transmembrane transporter activity
FYA20_RS18180	COG1609	Transcriptional regulator
FYA20_RS18190	COG3122	Protein conserved in bacteria
FYA20_RS18220	COG1215	transferase activity, transferring glycosyl groups
FYA20_RS18225	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FYA20_RS18230	COG4521	taurine ABC transporter
FYA20_RS18235	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FYA20_RS18240	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA20_RS18245	COG2175	clavaminate synthase activity
FYA20_RS18250	COG0113	porphobilinogen synthase activity
FYA20_RS18255	COG3468	outer membrane autotransporter barrel domain protein
FYA20_RS18260	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FYA20_RS18265	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FYA20_RS18270	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
FYA20_RS18290	COG1181	Belongs to the D-alanine--D-alanine ligase family
FYA20_RS18300	COG1785	Belongs to the alkaline phosphatase family
FYA20_RS18310	COG3706	GGDEF domain
FYA20_RS18315	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FYA20_RS18335	COG4126	flavin adenine dinucleotide binding
FYA20_RS18360	COG1940	carbohydrate kinase activity
FYA20_RS18365	COG2814	Major facilitator Superfamily
FYA20_RS18370	COG0419	ATPase involved in DNA repair
FYA20_RS18375	COG0420	3'-5' exonuclease activity
FYA20_RS18380	COG0745	RESPONSE REGULATOR receiver
FYA20_RS18385	COG5002	protein histidine kinase activity
FYA20_RS18390	COG1114	Component of the transport system for branched-chain amino acids
FYA20_RS18395	COG1113	amino acid transport
FYA20_RS18400	COG0366	Alpha amylase catalytic
FYA20_RS18420	COG1862	Preprotein translocase
FYA20_RS18425	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FYA20_RS18430	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FYA20_RS18435	COG1403	HNH endonuclease
FYA20_RS18440	COG3248	Nucleoside-binding outer membrane protein
FYA20_RS18445	COG4238	major outer membrane lipoprotein
FYA20_RS18455	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FYA20_RS18455	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FYA20_RS18470	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
FYA20_RS18475	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FYA20_RS18480	COG0667	Aldo Keto reductase
FYA20_RS18490	COG0142	geranyltranstransferase activity
FYA20_RS18505	COG0693	protein deglycase activity
FYA20_RS18510	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FYA20_RS18520	COG2814	Major facilitator Superfamily
FYA20_RS18530	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FYA20_RS18535	COG1845	cytochrome c oxidase, subunit III
FYA20_RS18540	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FYA20_RS18545	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FYA20_RS18550	COG2223	nitrite transmembrane transporter activity
FYA20_RS18555	COG3056	Lipoprotein
FYA20_RS18560	COG0271	Belongs to the BolA IbaG family
FYA20_RS18580	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FYA20_RS18585	COG0776	regulation of translation
FYA20_RS18590	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FYA20_RS18595	COG1555	photosystem II stabilization
FYA20_RS18600	COG0824	Thioesterase
FYA20_RS18610	COG4533	DNA binding
FYA20_RS18620	COG1522	sequence-specific DNA binding
FYA20_RS18625	COG1132	(ABC) transporter
FYA20_RS18630	COG1132	(ABC) transporter
FYA20_RS18635	COG0347	Belongs to the P(II) protein family
FYA20_RS18640	COG0004	ammonium transporteR
FYA20_RS18645	COG1946	Acyl-CoA thioesterase
FYA20_RS18650	COG3126	Type III secretion system lipoprotein chaperone (YscW)
FYA20_RS18655	COG3695	enzyme binding
FYA20_RS18665	COG5507	3-demethylubiquinone-9 3-methyltransferase
FYA20_RS18670	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FYA20_RS18680	COG0110	maltose O-acetyltransferase activity
FYA20_RS18695	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FYA20_RS18700	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA20_RS18705	COG1309	transcriptional regulator
FYA20_RS18710	COG3264	Mechanosensitive ion channel
FYA20_RS18710	COG1196	nuclear chromosome segregation
FYA20_RS18720	COG3923	Primosomal replication protein n
FYA20_RS18725	COG2832	Protein of unknown function (DUF454)
FYA20_RS18735	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FYA20_RS18770	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FYA20_RS18775	COG4651	solute:proton antiporter activity
FYA20_RS18775	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FYA20_RS18780	COG2223	nitrite transmembrane transporter activity
FYA20_RS18785	COG0737	Belongs to the 5'-nucleotidase family
FYA20_RS18800	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FYA20_RS18805	COG3735	TraB family
FYA20_RS18815	COG3093	addiction module antidote protein HigA
FYA20_RS18820	COG2217	Heavy metal translocating P-type atpase
FYA20_RS18830	COG0531	amino acid
FYA20_RS18835	COG0789	Transcriptional regulator
FYA20_RS18845	COG1585	Membrane protein implicated in regulation of membrane protease activity
FYA20_RS18850	COG0330	HflC and HflK could
FYA20_RS18855	COG4619	ABC transporter
FYA20_RS18860	COG0390	transport system, permease component
FYA20_RS18865	COG3118	belongs to the thioredoxin family
FYA20_RS18870	COG0300	oxidoreductase activity
FYA20_RS18875	COG2755	lipolytic protein G-D-S-L family
FYA20_RS18880	COG4181	ATPase activity
FYA20_RS18885	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
FYA20_RS18905	COG1414	Transcriptional regulator
FYA20_RS18910	COG3960	tartronate-semialdehyde synthase activity
FYA20_RS18915	COG3622	Belongs to the hyi family
FYA20_RS18920	COG2084	Dehydrogenase
FYA20_RS18925	COG1953	Uracil, thiamine, allantoin
FYA20_RS18935	COG2233	PERMEase
FYA20_RS18940	COG1929	Belongs to the glycerate kinase type-1 family
FYA20_RS18945	COG3257	ureidoglycine aminohydrolase activity
FYA20_RS18950	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FYA20_RS18955	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FYA20_RS18960	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FYA20_RS18965	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FYA20_RS18975	COG0549	Belongs to the carbamate kinase family
FYA20_RS18980	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FYA20_RS18985	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FYA20_RS19000	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FYA20_RS19010	COG1988	membrane-bound metal-dependent
FYA20_RS19015	COG2501	S4 domain
FYA20_RS19045	COG0500	methyltransferase
FYA20_RS19050	COG4571	Outer membrane protease
FYA20_RS19060	COG4783	chaperone-mediated protein folding
FYA20_RS19065	COG1215	transferase activity, transferring glycosyl groups
FYA20_RS19070	COG5002	protein histidine kinase activity
FYA20_RS19075	COG0745	RESPONSE REGULATOR receiver
FYA20_RS19080	COG1538	Outer membrane efflux protein
FYA20_RS19085	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA20_RS19090	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA20_RS19095	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FYA20_RS19100	COG1113	amino acid transport
FYA20_RS19105	COG0668	transmembrane transport
FYA20_RS19110	COG0778	Nitroreductase
FYA20_RS19115	COG2315	Protein conserved in bacteria
FYA20_RS19140	COG2977	Belongs to the P-Pant transferase superfamily
FYA20_RS19145	COG4771	TonB-dependent receptor
FYA20_RS19155	COG2382	esterase
FYA20_RS19160	COG3251	PFAM MbtH domain protein
FYA20_RS19165	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FYA20_RS19165	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
FYA20_RS19170	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
FYA20_RS19175	COG1120	ATPase activity
FYA20_RS19180	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYA20_RS19185	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYA20_RS19195	COG4592	Periplasmic binding protein
FYA20_RS19200	COG1169	isochorismate synthase
FYA20_RS19205	COG1021	2,3-dihydroxybenzoate-AMP ligase
FYA20_RS19210	COG3433	isochorismatase activity
FYA20_RS19210	COG1535	isochorismatase
FYA20_RS19215	COG1028	Short-chain dehydrogenase reductase Sdr
FYA20_RS19220	COG2050	protein possibly involved in aromatic compounds catabolism
FYA20_RS19225	COG1966	Carbon starvation protein
FYA20_RS19230	COG2879	small protein
FYA20_RS19235	COG0371	Dehydrogenase
FYA20_RS19240	COG0436	Aminotransferase
FYA20_RS19245	COG1475	DNA binding
FYA20_RS19250	COG3969	phosphoadenosine phosphosulfate
FYA20_RS19255	COG0583	DNA-binding transcription factor activity
FYA20_RS19260	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FYA20_RS19265	COG0450	alkyl hydroperoxide reductase
FYA20_RS19270	COG3634	alkyl hydroperoxide reductase activity
FYA20_RS19275	COG0589	response to stress
FYA20_RS19280	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FYA20_RS19285	COG3719	Belongs to the RNase T2 family
FYA20_RS19290	COG0471	metal ion transport
FYA20_RS19305	COG3051	citrate lyase alpha subunit
FYA20_RS19310	COG2301	Belongs to the HpcH HpaI aldolase family
FYA20_RS19320	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
FYA20_RS19325	COG3290	protein histidine kinase activity
FYA20_RS19330	COG4565	transcriptional regulatory protein
FYA20_RS19335	COG3069	C4-dicarboxylate transmembrane transporter activity
FYA20_RS19355	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FYA20_RS19360	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FYA20_RS19370	COG0583	DNA-binding transcription factor activity
FYA20_RS19385	COG1686	Belongs to the peptidase S11 family
FYA20_RS19390	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FYA20_RS19395	COG0772	Belongs to the SEDS family
FYA20_RS19400	COG0768	penicillin binding
FYA20_RS19410	COG0799	negative regulation of ribosome biogenesis
FYA20_RS19415	COG0406	alpha-ribazole phosphatase activity
FYA20_RS19425	COG1466	dna polymerase III delta subunit
FYA20_RS19440	COG2888	peptidyl-tyrosine sulfation
FYA20_RS19450	COG1126	abc transporter atp-binding protein
FYA20_RS19455	COG0765	amino acid transport
FYA20_RS19460	COG0765	amino acid transport
FYA20_RS19465	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA20_RS19475	COG0815	Transfers the fatty acyl group on membrane lipoproteins
FYA20_RS19480	COG4535	Mg2 and Co2 transporter CorC
FYA20_RS19490	COG1702	phosphate starvation-inducible protein PhoH
FYA20_RS19500	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FYA20_RS19540	COG0367	asparagine synthase
FYA20_RS19545	COG0647	UMP catabolic process
FYA20_RS19550	COG1846	Transcriptional regulator
FYA20_RS19550	COG1940	carbohydrate kinase activity
FYA20_RS19555	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FYA20_RS19565	COG2190	(PTS) system
FYA20_RS19565	COG1263	PTS System
FYA20_RS19565	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYA20_RS19585	COG0861	Integral membrane protein TerC family
FYA20_RS19590	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FYA20_RS19595	COG1454	alcohol dehydrogenase
FYA20_RS19600	COG3395	kinase activity
FYA20_RS19605	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FYA20_RS19610	COG1349	DNA-binding transcription factor activity
FYA20_RS19630	COG0735	belongs to the Fur family
FYA20_RS19640	COG0716	FMN binding
FYA20_RS19650	COG0596	Alpha beta hydrolase
FYA20_RS19655	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
FYA20_RS19660	COG0033	Phosphoglucomutase
FYA20_RS19665	COG0531	amino acid
FYA20_RS19670	COG1982	Orn Lys Arg decarboxylase major
FYA20_RS19685	COG0745	RESPONSE REGULATOR receiver
FYA20_RS19690	COG2205	protein histidine kinase activity
FYA20_RS19720	COG3272	Protein of unknown function (DUF1722)
FYA20_RS19725	COG0415	Belongs to the DNA photolyase family
FYA20_RS19735	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FYA20_RS19740	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FYA20_RS19745	COG1984	allophanate hydrolase subunit 2
FYA20_RS19760	COG3180	Ammonia monooxygenase
FYA20_RS19765	COG3539	Fimbrial protein
FYA20_RS19770	COG0372	Belongs to the citrate synthase family
FYA20_RS19780	COG2009	succinate dehydrogenase
FYA20_RS19785	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
FYA20_RS19790	COG1053	succinate dehydrogenase
FYA20_RS19795	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FYA20_RS19800	COG0567	Dehydrogenase, E1 component
FYA20_RS19805	COG0508	dehydrogenase complex catalyzes the overall conversion of
FYA20_RS19815	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FYA20_RS19830	COG1271	oxidase subunit
FYA20_RS19835	COG1294	oxidase, subunit
FYA20_RS19840	COG4890	Cyd operon protein YbgT
FYA20_RS19845	COG3790	cyd operon protein YbgE
FYA20_RS19850	COG0824	Thioesterase
FYA20_RS19855	COG0811	peptide transport
FYA20_RS19860	COG0848	biopolymer transport protein
FYA20_RS19865	COG3064	Membrane
FYA20_RS19875	COG2885	chlorophyll binding
FYA20_RS19880	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
FYA20_RS19920	COG3201	nicotinamide mononucleotide transporter
FYA20_RS19925	COG1230	cation diffusion facilitator family transporter
FYA20_RS19935	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FYA20_RS19945	COG2017	converts alpha-aldose to the beta-anomer
FYA20_RS19955	COG1085	galactose-1-phosphate uridylyltransferase
FYA20_RS19960	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FYA20_RS19965	COG1119	ATPase activity
FYA20_RS19970	COG3585	molybdate ion transport
FYA20_RS19970	COG2005	Transcriptional regulator
FYA20_RS19980	COG0725	ABC transporter, periplasmic molybdate-binding protein
FYA20_RS19985	COG4149	molybdate abc transporter
FYA20_RS19990	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
FYA20_RS19995	COG0561	phosphatase activity
FYA20_RS20005	COG0583	DNA-binding transcription factor activity
FYA20_RS20010	COG2828	Protein conserved in bacteria
FYA20_RS20015	COG0471	metal ion transport
FYA20_RS20020	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FYA20_RS20025	COG4677	pectinesterase activity
FYA20_RS20030	COG1881	PFAM PEBP family protein
FYA20_RS20040	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FYA20_RS20055	COG2226	methyltransferase
FYA20_RS20060	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FYA20_RS20070	COG0391	Required for morphogenesis under gluconeogenic growth conditions
FYA20_RS20080	COG0521	Mo-molybdopterin cofactor biosynthetic process
FYA20_RS20090	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
FYA20_RS20095	COG0314	molybdopterin synthase activity
FYA20_RS20100	COG0670	Belongs to the BI1 family
FYA20_RS20105	COG0670	Belongs to the BI1 family
FYA20_RS20110	COG0392	lysyltransferase activity
FYA20_RS20115	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FYA20_RS20120	COG3568	Endonuclease Exonuclease Phosphatase
FYA20_RS20130	COG0842	Transport permease protein
FYA20_RS20135	COG0842	Transport permease protein
FYA20_RS20140	COG1131	(ABC) transporter
FYA20_RS20150	COG1309	transcriptional regulator
FYA20_RS20155	COG0513	Belongs to the DEAD box helicase family
FYA20_RS20165	COG1199	ATP-dependent helicase activity
FYA20_RS20170	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FYA20_RS20175	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FYA20_RS20185	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FYA20_RS20210	COG0668	transmembrane transport
FYA20_RS20215	COG1126	abc transporter atp-binding protein
FYA20_RS20220	COG0765	amino acid transport
FYA20_RS20225	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA20_RS20235	COG5006	permease, DMT superfamily
FYA20_RS20245	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
FYA20_RS20250	COG2194	sulfuric ester hydrolase activity
FYA20_RS20260	COG1321	iron dependent repressor
FYA20_RS20265	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FYA20_RS20270	COG1376	ErfK ybiS ycfS ynhG family protein
FYA20_RS20275	COG0488	(ABC) transporter
FYA20_RS20280	COG0561	phosphatase activity
FYA20_RS20285	COG1882	Formate acetyltransferase
FYA20_RS20290	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FYA20_RS20295	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FYA20_RS20300	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FYA20_RS20305	COG0303	'Molybdopterin
FYA20_RS20310	COG1446	asparaginase
FYA20_RS20335	COG2200	EAL domain
FYA20_RS20340	COG2199	diguanylate cyclase activity
FYA20_RS20355	COG2133	pyrroloquinoline quinone binding
FYA20_RS20360	COG0625	glutathione transferase activity
FYA20_RS20365	COG1686	Belongs to the peptidase S11 family
FYA20_RS20370	COG1349	DNA-binding transcription factor activity
FYA20_RS20375	COG0671	phosphoesterase, PA-phosphatase related
FYA20_RS20380	COG2814	Major facilitator Superfamily
FYA20_RS20390	COG0561	phosphatase activity
FYA20_RS20395	COG0738	Major facilitator superfamily
FYA20_RS20400	COG3226	Transcriptional regulator
FYA20_RS20405	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
FYA20_RS20460	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FYA20_RS20495	COG4695	Portal protein
FYA20_RS20595	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
FYA20_RS20650	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FYA20_RS20660	COG0778	Nitroreductase
FYA20_RS20675	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FYA20_RS20680	COG3842	ATPase activity
FYA20_RS20685	COG1176	ABC-type spermidine putrescine transport system, permease component I
FYA20_RS20690	COG1177	transmembrane transport
FYA20_RS20705	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA20_RS20710	COG4160	amino acid transport
FYA20_RS20715	COG4215	(ABC) transporter
FYA20_RS20720	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FYA20_RS20725	COG1126	abc transporter atp-binding protein
FYA20_RS20740	COG3023	N-Acetylmuramoyl-L-alanine amidase
FYA20_RS20745	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FYA20_RS20750	COG0702	epimerase
FYA20_RS20755	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
FYA20_RS20760	COG0028	Belongs to the TPP enzyme family
FYA20_RS20765	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FYA20_RS20770	COG1151	hydroxylamine reductase activity
FYA20_RS20775	COG2431	L-lysine efflux transmembrane transporter activity
FYA20_RS20790	COG3593	DNA synthesis involved in DNA repair
FYA20_RS20795	COG2990	Protein conserved in bacteria
FYA20_RS20800	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA20_RS20810	COG1278	Cold shock
FYA20_RS20820	COG0542	response to heat
FYA20_RS20825	COG1518	maintenance of DNA repeat elements
FYA20_RS20830	COG1203	CRISPR-associated helicase, Cas3
FYA20_RS20875	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FYA20_RS20880	COG4988	ABC transporter
FYA20_RS20885	COG0492	ferredoxin-NADP+ reductase activity
FYA20_RS20890	COG1522	sequence-specific DNA binding
FYA20_RS20895	COG1178	ABC-type Fe3 transport system permease component
FYA20_RS20895	COG1674	ftsk spoiiie
FYA20_RS20905	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FYA20_RS20915	COG0243	molybdopterin cofactor binding
FYA20_RS20920	COG0437	4 iron, 4 sulfur cluster binding
FYA20_RS20925	COG3302	dmso reductase anchor subunit
FYA20_RS20930	COG1335	isochorismatase
FYA20_RS20940	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FYA20_RS20945	COG1882	Formate acetyltransferase
FYA20_RS20950	COG2116	formate transmembrane transporter activity
FYA20_RS20955	COG1944	ATP diphosphatase activity
FYA20_RS20960	COG2323	membrane
FYA20_RS20975	COG0501	Belongs to the peptidase M48B family
FYA20_RS20985	COG0539	negative regulation of cytoplasmic translation
FYA20_RS20995	COG2333	competence protein COMEC
FYA20_RS20995	COG0658	competence protein
FYA20_RS21010	COG3214	Protein conserved in bacteria
FYA20_RS21025	COG3173	Aminoglycoside phosphotransferase
FYA20_RS21030	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FYA20_RS21035	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FYA20_RS21045	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
FYA20_RS21055	COG2989	Protein conserved in bacteria
FYA20_RS21060	COG3108	Peptidase M15
FYA20_RS21065	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FYA20_RS21070	COG1448	Aminotransferase
FYA20_RS21090	COG0308	aminopeptidase N
FYA20_RS21095	COG1116	anion transmembrane transporter activity
FYA20_RS21100	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FYA20_RS21110	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FYA20_RS21115	COG0431	NADPH-dependent FMN reductase
FYA20_RS21135	COG0633	Ferredoxin
FYA20_RS21135	COG3217	Mosc domain protein beta barrel domain protein
FYA20_RS21140	COG0116	Belongs to the methyltransferase superfamily
FYA20_RS21140	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FYA20_RS21145	COG0488	(ABC) transporter
FYA20_RS21150	COG2995	paraquat-inducible protein a
FYA20_RS21155	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FYA20_RS21155	COG3008	intermembrane lipid transfer
FYA20_RS21160	COG3009	Protein conserved in bacteria
FYA20_RS21165	COG3130	regulation of translation
FYA20_RS21175	COG1067	ATP-dependent peptidase activity
FYA20_RS21185	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
FYA20_RS21185	COG2885	chlorophyll binding
FYA20_RS21195	COG3070	regulator of competence-specific genes
FYA20_RS21200	COG1289	transmembrane transporter activity
FYA20_RS21205	COG3304	Inner membrane component domain
FYA20_RS21210	COG0210	DNA helicase
FYA20_RS21225	COG1832	CoA-binding protein
FYA20_RS21245	COG2920	part of a sulfur-relay system
FYA20_RS21250	COG0670	Belongs to the BI1 family
FYA20_RS21260	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
FYA20_RS21265	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
FYA20_RS21270	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
FYA20_RS21275	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
FYA20_RS21280	COG1999	signal sequence binding
FYA20_RS21285	COG1773	rubredoxin
FYA20_RS21290	COG1271	oxidase subunit
FYA20_RS21295	COG1294	oxidase, subunit
FYA20_RS21310	COG1278	Cold shock
FYA20_RS21315	COG1278	Cold shock
FYA20_RS21335	COG0348	domain, Protein
FYA20_RS21340	COG2205	protein histidine kinase activity
FYA20_RS21340	COG2198	Histidine kinase
FYA20_RS21340	COG0784	Response regulator, receiver
FYA20_RS21345	COG1879	ABC-type sugar transport system periplasmic component
FYA20_RS21350	COG0745	RESPONSE REGULATOR receiver
FYA20_RS21355	COG3005	denitrification pathway
FYA20_RS21360	COG0243	molybdopterin cofactor binding
FYA20_RS21365	COG3381	protein complex oligomerization
FYA20_RS21395	COG3729	General stress protein
FYA20_RS21400	COG2233	PERMEase
FYA20_RS21435	COG1309	transcriptional regulator
FYA20_RS21440	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FYA20_RS21440	COG0506	proline dehydrogenase activity
FYA20_RS21440	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FYA20_RS21450	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FYA20_RS21470	COG1702	phosphate starvation-inducible protein PhoH
FYA20_RS21475	COG3658	cytochrome
FYA20_RS21480	COG1215	transferase activity, transferring glycosyl groups
FYA20_RS21485	COG0726	polysaccharide deacetylase
FYA20_RS21485	COG1649	PFAM Uncharacterised BCR, COG1649
FYA20_RS21490	COG0457	Tetratricopeptide repeat
FYA20_RS21495	COG3706	GGDEF domain
FYA20_RS21500	COG0582	viral genome integration into host DNA
FYA20_RS21530	COG4983	Phage plasmid primase, P4 family domain protein
FYA20_RS21545	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
FYA20_RS21555	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FYA20_RS21570	COG2222	sugar isomerase
FYA20_RS21615	COG3539	Fimbrial protein
FYA20_RS21665	COG2819	hydrolase of the alpha beta superfamily
FYA20_RS21670	COG2382	esterase
FYA20_RS21735	COG4771	TonB-dependent receptor
FYA20_RS21745	COG0523	cobalamin synthesis protein
FYA20_RS21805	COG3468	outer membrane autotransporter barrel domain protein
FYA20_RS21835	COG2003	Belongs to the UPF0758 family
FYA20_RS21890	COG3381	protein complex oligomerization
FYA20_RS21900	COG1462	curli production assembly transport component CsgG
FYA20_RS21915	COG2197	response regulator
FYA20_RS21940	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
FYA20_RS21945	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FYA20_RS21960	COG2943	transferase activity, transferring hexosyl groups
FYA20_RS21965	COG5645	(Lipo)protein
FYA20_RS21980	COG1560	Kdo2-lipid A biosynthetic process
FYA20_RS21990	COG2353	YceI-like domain
FYA20_RS21995	COG3038	cytochrome b561
FYA20_RS22005	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FYA20_RS22030	COG2999	glutathione oxidoreductase activity
FYA20_RS22040	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FYA20_RS22050	COG0673	inositol 2-dehydrogenase activity
FYA20_RS22055	COG0728	peptidoglycan biosynthetic process
FYA20_RS22060	COG3418	PFAM FlgN family protein
FYA20_RS22065	COG2747	anti-sigma28 factor FlgM
FYA20_RS22070	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
FYA20_RS22075	COG1815	bacterial-type flagellum-dependent cell motility
FYA20_RS22080	COG1558	bacterial-type flagellum-dependent cell motility
FYA20_RS22085	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
FYA20_RS22090	COG1749	Flagellar hook protein flgE
FYA20_RS22095	COG4787	bacterial-type flagellum-dependent cell motility
FYA20_RS22100	COG4786	Flagellar basal body rod
FYA20_RS22115	COG1705	Flagellar rod assembly protein muramidase FlgJ
FYA20_RS22115	COG3951	Flagellar rod assembly protein muramidase FlgJ
FYA20_RS22120	COG1256	bacterial-type flagellum assembly
FYA20_RS22125	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FYA20_RS22130	COG1530	ribonuclease E activity
FYA20_RS22135	COG0564	pseudouridine synthase activity
FYA20_RS22140	COG0424	maF-like protein
FYA20_RS22145	COG1399	metal-binding, possibly nucleic acid-binding protein
FYA20_RS22165	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
FYA20_RS22170	COG1028	Short-chain dehydrogenase reductase Sdr
FYA20_RS22180	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FYA20_RS22185	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FYA20_RS22190	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FYA20_RS22200	COG0470	DNA polymerase III
FYA20_RS22205	COG0084	hydrolase, TatD family'
FYA20_RS22210	COG1263	PTS System
FYA20_RS22210	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FYA20_RS22215	COG4773	Receptor
FYA20_RS22220	COG0537	adenosine 5'-monophosphoramidase activity
FYA20_RS22225	COG5633	Lipoprotein
FYA20_RS22230	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
FYA20_RS22250	COG1252	NADH dehydrogenase
FYA20_RS22255	COG3134	Outer membrane lipoprotein
FYA20_RS22260	COG1309	transcriptional regulator
FYA20_RS22270	COG1376	ErfK ybiS ycfS ynhG family protein
FYA20_RS22270	COG1388	LysM domain
FYA20_RS22275	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FYA20_RS22280	COG4763	Acyl-transferase
FYA20_RS22285	COG4591	ABC-type transport system involved in lipoprotein release permease component
FYA20_RS22295	COG4591	ABC-type transport system involved in lipoprotein release permease component
FYA20_RS22305	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FYA20_RS22310	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
FYA20_RS22320	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FYA20_RS22325	COG1177	transmembrane transport
FYA20_RS22330	COG0582	viral genome integration into host DNA
FYA20_RS22340	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FYA20_RS22370	COG4197	protein conserved in bacteria, prophage-related
FYA20_RS22430	COG1403	HNH endonuclease
FYA20_RS22435	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
FYA20_RS22440	COG0484	heat shock protein binding
FYA20_RS22485	COG3772	lysozyme
FYA20_RS22495	COG4220	transposase activity
FYA20_RS22565	COG1196	nuclear chromosome segregation
FYA20_RS22605	COG5301	cellulose 1,4-beta-cellobiosidase activity
FYA20_RS22640	COG2850	peptidyl-arginine hydroxylation
FYA20_RS22645	COG2205	protein histidine kinase activity
FYA20_RS22655	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FYA20_RS22675	COG1187	pseudouridine synthase activity
FYA20_RS22680	COG0538	isocitrate dehydrogenase activity
FYA20_RS22685	COG0582	viral genome integration into host DNA
FYA20_RS22775	COG2076	Multidrug Resistance protein
FYA20_RS22785	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FYA20_RS22865	COG4220	transposase activity
FYA20_RS22885	COG1030	water channel activity
FYA20_RS22935	COG1196	nuclear chromosome segregation
FYA20_RS22965	COG5301	cellulose 1,4-beta-cellobiosidase activity
FYA20_RS22980	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FYA20_RS22985	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FYA20_RS22990	COG1121	(ABC) transporter
FYA20_RS23010	COG0456	acetyltransferase
FYA20_RS23015	COG0538	isocitrate dehydrogenase activity
FYA20_RS23025	COG5562	phage envelope protein
FYA20_RS23030	COG0789	Transcriptional regulator
FYA20_RS23035	COG2200	EAL domain
FYA20_RS23115	COG2894	cell division
FYA20_RS23140	COG0179	Fumarylacetoacetate (FAA) hydrolase
FYA20_RS23155	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FYA20_RS23160	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FYA20_RS23170	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
FYA20_RS23180	COG2719	SpoVR family
FYA20_RS23190	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FYA20_RS23200	COG1619	proteins homologs of microcin C7 resistance protein MccF
FYA20_RS23210	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
FYA20_RS23225	COG0157	Belongs to the NadC ModD family
FYA20_RS23230	COG0500	methyltransferase
FYA20_RS23235	COG1120	ATPase activity
FYA20_RS23240	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FYA20_RS23245	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FYA20_RS23260	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
FYA20_RS23260	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FYA20_RS23260	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FYA20_RS23265	COG1461	Dihydroxyacetone kinase
FYA20_RS23270	COG2376	Dihydroxyacetone kinase
FYA20_RS23275	COG3284	Transcriptional regulator
FYA20_RS23285	COG0012	GTP binding
FYA20_RS23300	COG0659	secondary active sulfate transmembrane transporter activity
FYA20_RS23305	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FYA20_RS23310	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
FYA20_RS23330	COG2890	protein-(glutamine-N5) methyltransferase activity
FYA20_RS23335	COG3094	Invasion gene expression up-regulator, SirB
FYA20_RS23340	COG2912	Transglutaminase-like superfamily
FYA20_RS23360	COG0387	Pfam Sodium calcium exchanger
FYA20_RS23365	COG4572	Cation transport regulator
FYA20_RS23370	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
FYA20_RS23375	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
FYA20_RS23380	COG4932	domain protein
FYA20_RS23385	COG2197	response regulator
FYA20_RS23390	COG3850	Histidine kinase
FYA20_RS23395	COG2223	nitrite transmembrane transporter activity
FYA20_RS23400	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
FYA20_RS23405	COG1140	nitrate reductase beta subunit
FYA20_RS23410	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
FYA20_RS23415	COG2181	nitrate reductase activity
FYA20_RS23440	COG0788	formyltetrahydrofolate deformylase activity
FYA20_RS23450	COG1752	Esterase of the alpha-beta hydrolase superfamily
FYA20_RS23455	COG0745	RESPONSE REGULATOR receiver
FYA20_RS23460	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FYA20_RS23470	COG1435	thymidine kinase activity
FYA20_RS23480	COG1454	alcohol dehydrogenase
FYA20_RS23480	COG1012	belongs to the aldehyde dehydrogenase family
FYA20_RS23485	COG2095	MarC family integral membrane protein
FYA20_RS23490	COG4166	transmembrane transport
FYA20_RS23495	COG0601	transmembrane transport
FYA20_RS23500	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FYA20_RS23505	COG0444	Belongs to the ABC transporter superfamily
FYA20_RS23510	COG4608	Belongs to the ABC transporter superfamily
FYA20_RS23530	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FYA20_RS23535	COG2350	Protein conserved in bacteria
FYA20_RS23540	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
FYA20_RS23545	COG1607	acyl-coa hydrolase
FYA20_RS23565	COG3047	cAMP biosynthetic process
FYA20_RS23570	COG3685	Protein conserved in bacteria
FYA20_RS23575	COG3685	Protein conserved in bacteria
FYA20_RS23580	COG3729	General stress protein
FYA20_RS23585	COG0159	tryptophan synthase activity
FYA20_RS23595	COG0134	indole-3-glycerol-phosphate synthase activity
FYA20_RS23595	COG0135	phosphoribosylanthranilate isomerase activity
FYA20_RS23600	COG0512	Glutamine amidotransferase of anthranilate synthase
FYA20_RS23600	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FYA20_RS23605	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FYA20_RS23615	COG0613	PHP domain protein
FYA20_RS23620	COG0009	L-threonylcarbamoyladenylate synthase
FYA20_RS23625	COG4907	membrane protein (DUF2207)
FYA20_RS23630	COG1187	pseudouridine synthase activity
FYA20_RS23635	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
FYA20_RS23640	COG1028	Short-chain dehydrogenase reductase Sdr
FYA20_RS23645	COG0616	signal peptide processing
FYA20_RS23655	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FYA20_RS23660	COG0583	DNA-binding transcription factor activity
FYA20_RS23680	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FYA20_RS23690	COG0671	phosphoesterase, PA-phosphatase related
FYA20_RS23695	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
FYA20_RS23700	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
FYA20_RS23710	COG0023	Translation Initiation Factor
FYA20_RS23720	COG1349	DNA-binding transcription factor activity
FYA20_RS23730	COG5001	Diguanylate cyclase
FYA20_RS23745	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYA20_RS23745	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FYA20_RS23750	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FYA20_RS23760	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FYA20_RS23775	COG2814	Major facilitator Superfamily
FYA20_RS23780	COG4172	Belongs to the ABC transporter superfamily
FYA20_RS23785	COG4172	Belongs to the ABC transporter superfamily
FYA20_RS23790	COG4171	peptide transport system, permease
FYA20_RS23795	COG4168	peptide transport system, permease
FYA20_RS23800	COG4166	transmembrane transport
FYA20_RS23815	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
FYA20_RS23820	COG1842	Phage shock protein A
FYA20_RS23830	COG1983	PspC domain protein
FYA20_RS23840	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FYA20_RS23845	COG0366	Alpha amylase catalytic
FYA20_RS23850	COG1653	transport
FYA20_RS23855	COG1175	transmembrane transport
FYA20_RS23860	COG0395	ABC-type sugar transport system, permease component
FYA20_RS23865	COG1063	alcohol dehydrogenase
FYA20_RS23870	COG1082	Xylose isomerase domain protein TIM barrel
FYA20_RS23875	COG0673	inositol 2-dehydrogenase activity
FYA20_RS23880	COG1554	hydrolase, family 65, central catalytic
FYA20_RS23885	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FYA20_RS23900	COG1609	Transcriptional regulator
FYA20_RS23905	COG3106	COG3106 Predicted ATPase
FYA20_RS23915	COG3283	Transcriptional regulator of aromatic amino acids metabolism
FYA20_RS23920	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
FYA20_RS23925	COG4948	Mandelate Racemase Muconate Lactonizing
FYA20_RS23930	COG2866	Carboxypeptidase
FYA20_RS23935	COG0702	epimerase
FYA20_RS23945	COG1073	alpha beta
FYA20_RS23950	COG0583	DNA-binding transcription factor activity
FYA20_RS23955	COG4166	transmembrane transport
FYA20_RS23960	COG0668	transmembrane transport
FYA20_RS23965	COG3182	Iron-regulated membrane protein
FYA20_RS23970	COG0589	response to stress
FYA20_RS23975	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FYA20_RS23980	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FYA20_RS24000	COG2814	Major facilitator Superfamily
FYA20_RS24005	COG2840	Smr protein MutS2
FYA20_RS24010	COG3706	GGDEF domain
FYA20_RS24025	COG0513	Belongs to the DEAD box helicase family
FYA20_RS24055	COG0589	response to stress
FYA20_RS24060	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FYA20_RS24065	COG0674	pyruvate-flavodoxin oxidoreductase activity
FYA20_RS24065	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
FYA20_RS24065	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FYA20_RS24065	COG1013	pyruvate-flavodoxin oxidoreductase activity
FYA20_RS24070	COG3042	response to heat
FYA20_RS24075	COG3187	Heat shock protein
FYA20_RS24080	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FYA20_RS24085	COG2911	Protein conserved in bacteria
FYA20_RS24095	COG3784	Protein of unknown function (DUF1318)
FYA20_RS24105	COG0667	Aldo Keto reductase
FYA20_RS24115	COG1643	Atp-dependent helicase
FYA20_RS24120	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FYA20_RS24125	COG1012	belongs to the aldehyde dehydrogenase family
FYA20_RS24130	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FYA20_RS24135	COG3038	cytochrome b561
FYA20_RS24155	COG0583	DNA-binding transcription factor activity
FYA20_RS24160	COG5383	Protein conserved in bacteria
FYA20_RS24170	COG2841	Protein conserved in bacteria
FYA20_RS24175	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FYA20_RS24180	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FYA20_RS24185	COG1275	C4-dicarboxylate transporter malic acid transport protein
FYA20_RS24190	COG0500	methyltransferase
FYA20_RS24200	COG3135	benzoate transporter
FYA20_RS24205	COG1396	sequence-specific DNA binding
FYA20_RS24210	COG0826	peptidase U32
FYA20_RS24225	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FYA20_RS24230	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FYA20_RS24235	COG3842	ATPase activity
FYA20_RS24240	COG1176	ABC-type spermidine putrescine transport system, permease component I
FYA20_RS24245	COG1177	transmembrane transport
FYA20_RS24270	COG3238	Protein conserved in bacteria
FYA20_RS24275	COG1247	-acetyltransferase
FYA20_RS24285	COG1802	Transcriptional regulator
FYA20_RS24290	COG4772	TonB-dependent receptor
FYA20_RS24315	COG3501	Rhs element vgr protein
FYA20_RS24350	COG3501	Rhs element vgr protein
FYA20_RS24375	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FYA20_RS24380	COG2162	N-hydroxyarylamine O-acetyltransferase activity
FYA20_RS24385	COG0384	phenazine biosynthesis protein PhzF
FYA20_RS24390	COG2181	nitrate reductase activity
FYA20_RS24395	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
FYA20_RS24400	COG1140	nitrate reductase beta subunit
FYA20_RS24405	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
FYA20_RS24410	COG2223	nitrite transmembrane transporter activity
FYA20_RS24415	COG0697	spore germination
FYA20_RS24425	COG0437	4 iron, 4 sulfur cluster binding
FYA20_RS24430	COG2864	formate dehydrogenase
FYA20_RS24435	COG3093	addiction module antidote protein HigA
FYA20_RS24445	COG1064	alcohol dehydrogenase
FYA20_RS24465	COG1764	response to oxidative stress
FYA20_RS24470	COG2202	Pas domain
FYA20_RS24470	COG2200	EAL domain
FYA20_RS24470	COG2199	diguanylate cyclase activity
FYA20_RS24475	COG3706	GGDEF domain
FYA20_RS24475	COG3706	GGDEF domain
FYA20_RS24480	COG1649	PFAM Uncharacterised BCR, COG1649
FYA20_RS24485	COG0531	amino acid
FYA20_RS24490	COG0076	glutamate decarboxylase activity
FYA20_RS24500	COG0612	Peptidase, M16
FYA20_RS24505	COG4771	TonB-dependent receptor
FYA20_RS24510	COG4178	(ABC) transporter
FYA20_RS24520	COG0641	radical SAM
FYA20_RS24525	COG3119	arylsulfatase activity
FYA20_RS24540	COG0243	molybdopterin cofactor binding
FYA20_RS24545	COG3539	Fimbrial protein
FYA20_RS24550	COG3539	Fimbrial protein
FYA20_RS24555	COG3539	Fimbrial protein
FYA20_RS24560	COG3188	usher protein
FYA20_RS24570	COG3539	Fimbrial protein
FYA20_RS24580	COG0702	epimerase
FYA20_RS24785	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FYA20_RS24905	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FYA20_RS24925	COG3271	cysteine-type peptidase activity
FYA20_RS24925	COG2274	protein secretion by the type I secretion system
FYA20_RS24935	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
FYA20_RS24960	COG3451	type IV secretory pathway VirB4
FYA20_RS25000	COG2026	Addiction module toxin, RelE StbE family
FYA20_RS25065	COG0330	HflC and HflK could