locus-tag	class	description
HHJ40_RS00010	COG0592	DNA-directed DNA polymerase activity
HHJ40_RS00020	COG0187	DNA topoisomerase II activity
HHJ40_RS00025	COG3753	Protein conserved in bacteria
HHJ40_RS00030	COG0561	phosphatase activity
HHJ40_RS00040	COG2186	Transcriptional regulator
HHJ40_RS00045	COG3734	2-keto-3-deoxy-galactonokinase
HHJ40_RS00050	COG0800	Aldolase
HHJ40_RS00060	COG2271	Major facilitator Superfamily
HHJ40_RS00070	COG0823	Involved in the tonB-independent uptake of proteins
HHJ40_RS00075	COG5645	(Lipo)protein
HHJ40_RS00095	COG2188	Transcriptional regulator
HHJ40_RS00110	COG2207	Transcriptional regulator
HHJ40_RS00115	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
HHJ40_RS00120	COG3119	arylsulfatase activity
HHJ40_RS00130	COG2149	membrane
HHJ40_RS00140	COG0641	radical SAM
HHJ40_RS00145	COG2814	Major facilitator Superfamily
HHJ40_RS00160	COG0028	Belongs to the TPP enzyme family
HHJ40_RS00165	COG0440	acetolactate synthase activity
HHJ40_RS00170	COG2197	response regulator
HHJ40_RS00175	COG3851	Histidine kinase
HHJ40_RS00180	COG2271	Major facilitator Superfamily
HHJ40_RS00185	COG2271	Major facilitator Superfamily
HHJ40_RS00195	COG2252	PERMEase
HHJ40_RS00215	COG1464	Belongs to the NlpA lipoprotein family
HHJ40_RS00220	COG0697	spore germination
HHJ40_RS00225	COG2814	Major facilitator Superfamily
HHJ40_RS00265	COG2003	Belongs to the UPF0758 family
HHJ40_RS00285	COG3468	outer membrane autotransporter barrel domain protein
HHJ40_RS00360	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
HHJ40_RS00365	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ40_RS00375	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
HHJ40_RS00400	COG1216	Glycosyl transferase, family 2
HHJ40_RS00405	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
HHJ40_RS00420	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
HHJ40_RS00430	COG0204	Acyl-transferase
HHJ40_RS00475	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
HHJ40_RS00515	COG0582	viral genome integration into host DNA
HHJ40_RS00525	COG2211	Major facilitator Superfamily
HHJ40_RS00530	COG1501	Belongs to the glycosyl hydrolase 31 family
HHJ40_RS00535	COG2982	Protein involved in outer membrane biogenesis
HHJ40_RS00540	COG2233	PERMEase
HHJ40_RS00545	COG0786	glutamate:sodium symporter activity
HHJ40_RS00555	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
HHJ40_RS00560	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
HHJ40_RS00565	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
HHJ40_RS00575	COG0194	GDP metabolic process
HHJ40_RS00585	COG2860	membrane
HHJ40_RS00590	COG3645	SOS response
HHJ40_RS00595	COG1561	YicC-like family, N-terminal region
HHJ40_RS00620	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
HHJ40_RS00650	COG1519	Transferase
HHJ40_RS00655	COG0859	PFAM glycosyl transferase family 9
HHJ40_RS00660	COG0438	transferase activity, transferring glycosyl groups
HHJ40_RS00665	COG0515	serine threonine protein kinase
HHJ40_RS00695	COG0859	PFAM glycosyl transferase family 9
HHJ40_RS00700	COG0859	PFAM glycosyl transferase family 9
HHJ40_RS00715	COG0156	8-amino-7-oxononanoate synthase activity
HHJ40_RS00725	COG1216	Glycosyl transferase, family 2
HHJ40_RS00730	COG2861	carbohydrate metabolic process
HHJ40_RS00735	COG4942	peptidase
HHJ40_RS00745	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
HHJ40_RS00750	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
HHJ40_RS00765	COG1045	serine acetyltransferase
HHJ40_RS00770	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
HHJ40_RS00780	COG2186	Transcriptional regulator
HHJ40_RS00785	COG1620	l-lactate permease
HHJ40_RS00790	COG5295	Hep Hag repeat protein
HHJ40_RS00810	COG3722	fumarate hydratase activity
HHJ40_RS00820	COG2213	PTS system mannitol-specific
HHJ40_RS00820	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ40_RS00830	COG1566	PFAM secretion protein HlyD family protein
HHJ40_RS00865	COG3209	COG3209 Rhs family protein
HHJ40_RS00870	COG3209	COG3209 Rhs family protein
HHJ40_RS00885	COG0625	glutathione transferase activity
HHJ40_RS00895	COG3276	selenocysteine insertion sequence binding
HHJ40_RS00900	COG1454	alcohol dehydrogenase
HHJ40_RS00905	COG1012	belongs to the aldehyde dehydrogenase family
HHJ40_RS00920	COG1566	PFAM secretion protein HlyD family protein
HHJ40_RS00925	COG0583	DNA-binding transcription factor activity
HHJ40_RS00930	COG3713	MltA-interacting MipA family protein
HHJ40_RS00940	COG0235	Class ii aldolase
HHJ40_RS00945	COG3623	hexulose-6-phosphate isomerase
HHJ40_RS00950	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
HHJ40_RS00955	COG1070	Carbohydrate kinase
HHJ40_RS00960	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
HHJ40_RS00965	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
HHJ40_RS00970	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
HHJ40_RS00975	COG2731	YhcH YjgK YiaL family protein
HHJ40_RS00985	COG1414	Transcriptional regulator
HHJ40_RS00990	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
HHJ40_RS00995	COG3977	Valine--pyruvate aminotransferase
HHJ40_RS01000	COG0366	Alpha amylase catalytic
HHJ40_RS01005	COG2992	FlgJ-related protein
HHJ40_RS01010	COG2207	Transcriptional regulator
HHJ40_RS01010	COG1609	Transcriptional regulator
HHJ40_RS01015	COG4214	carbohydrate transport
HHJ40_RS01020	COG1129	ABC transporter
HHJ40_RS01025	COG4213	ABC transporter substrate-binding protein
HHJ40_RS01035	COG1070	Carbohydrate kinase
HHJ40_RS01040	COG4682	membrane
HHJ40_RS01045	COG4682	membrane
HHJ40_RS01050	COG3274	enterobacterial common antigen metabolic process
HHJ40_RS01075	COG1278	Cold shock
HHJ40_RS01080	COG2944	sequence-specific DNA binding
HHJ40_RS01095	COG2885	chlorophyll binding
HHJ40_RS01100	COG0243	molybdopterin cofactor binding
HHJ40_RS01105	COG0456	acetyltransferase
HHJ40_RS01110	COG2818	Glycosylase
HHJ40_RS01115	COG5571	outer membrane autotransporter
HHJ40_RS01120	COG2223	nitrite transmembrane transporter activity
HHJ40_RS01150	COG2194	sulfuric ester hydrolase activity
HHJ40_RS01165	COG0747	negative chemotaxis
HHJ40_RS01170	COG0601	transmembrane transport
HHJ40_RS01175	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
HHJ40_RS01180	COG0444	Belongs to the ABC transporter superfamily
HHJ40_RS01185	COG4608	Belongs to the ABC transporter superfamily
HHJ40_RS01190	COG0814	amino acid
HHJ40_RS01210	COG2194	sulfuric ester hydrolase activity
HHJ40_RS01235	COG1215	transferase activity, transferring glycosyl groups
HHJ40_RS01240	COG1215	transferase activity, transferring glycosyl groups
HHJ40_RS01245	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
HHJ40_RS01250	COG3118	belongs to the thioredoxin family
HHJ40_RS01250	COG0457	Tetratricopeptide repeat
HHJ40_RS01255	COG2199	diguanylate cyclase activity
HHJ40_RS01255	COG2200	EAL domain
HHJ40_RS01265	COG0612	Peptidase, M16
HHJ40_RS01275	COG2200	EAL domain
HHJ40_RS01280	COG2982	Protein involved in outer membrane biogenesis
HHJ40_RS01285	COG0477	Major facilitator Superfamily
HHJ40_RS01290	COG1295	ribonuclease BN
HHJ40_RS01295	COG0583	DNA-binding transcription factor activity
HHJ40_RS01300	COG2197	response regulator
HHJ40_RS01310	COG1858	cytochrome C peroxidase
HHJ40_RS01315	COG0076	glutamate decarboxylase activity
HHJ40_RS01325	COG2207	Transcriptional regulator
HHJ40_RS01330	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
HHJ40_RS01335	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
HHJ40_RS01345	COG2771	luxR family
HHJ40_RS01350	COG3247	response to pH
HHJ40_RS01365	COG1285	pathogenesis
HHJ40_RS01370	COG2197	response regulator
HHJ40_RS01375	COG3065	identical protein binding
HHJ40_RS01395	COG1393	Belongs to the ArsC family
HHJ40_RS01400	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
HHJ40_RS01405	COG0640	Transcriptional regulator
HHJ40_RS01415	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
HHJ40_RS01420	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
HHJ40_RS01425	COG0339	signal peptide processing
HHJ40_RS01435	COG3104	oligopeptide transport
HHJ40_RS01440	COG0589	response to stress
HHJ40_RS01450	COG0306	phosphate transporter
HHJ40_RS01455	COG2081	HI0933 family
HHJ40_RS01475	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
HHJ40_RS01480	COG1129	ABC transporter
HHJ40_RS01480	COG0842	Transport permease protein
HHJ40_RS01485	COG0842	Transport permease protein
HHJ40_RS01510	COG0444	Belongs to the ABC transporter superfamily
HHJ40_RS01515	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
HHJ40_RS01520	COG0601	transmembrane transport
HHJ40_RS01525	COG0747	negative chemotaxis
HHJ40_RS01530	COG2091	lysine biosynthetic process via aminoadipic acid
HHJ40_RS01535	COG0628	permease
HHJ40_RS01550	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
HHJ40_RS01565	COG3714	YhhN family
HHJ40_RS01575	COG3776	membrane
HHJ40_RS01580	COG0742	ribosomal rna small subunit methyltransferase
HHJ40_RS01585	COG0552	protein localization to endoplasmic reticulum
HHJ40_RS01590	COG2884	Cell division ATP-binding protein ftsE
HHJ40_RS01595	COG2177	Part of the ABC transporter FtsEX involved in
HHJ40_RS01600	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
HHJ40_RS01605	COG0683	leucine binding
HHJ40_RS01610	COG0456	acetyltransferase
HHJ40_RS01615	COG0683	leucine binding
HHJ40_RS01620	COG0559	Belongs to the binding-protein-dependent transport system permease family
HHJ40_RS01625	COG4177	L-phenylalanine transmembrane transporter activity
HHJ40_RS01630	COG0411	ABC transporter
HHJ40_RS01635	COG0410	ABC transporter
HHJ40_RS01645	COG1653	transport
HHJ40_RS01650	COG1175	transmembrane transport
HHJ40_RS01660	COG3842	ATPase activity
HHJ40_RS01665	COG0584	glycerophosphoryl diester phosphodiesterase
HHJ40_RS01675	COG0405	Gamma-glutamyltransferase
HHJ40_RS01695	COG3157	Type VI secretion system effector, Hcp
HHJ40_RS01700	COG1247	-acetyltransferase
HHJ40_RS01705	COG0673	inositol 2-dehydrogenase activity
HHJ40_RS01710	COG1741	Belongs to the pirin family
HHJ40_RS01715	COG1609	Transcriptional regulator
HHJ40_RS01720	COG3265	gluconokinase activity
HHJ40_RS01725	COG2610	gluconate transmembrane transporter activity
HHJ40_RS01730	COG0514	ATP-dependent DNA helicase (RecQ)
HHJ40_RS01740	COG2095	MarC family integral membrane protein
HHJ40_RS01745	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
HHJ40_RS01770	COG0058	SHG alpha-glucan phosphorylase activity
HHJ40_RS01775	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
HHJ40_RS01795	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
HHJ40_RS01810	COG1349	DNA-binding transcription factor activity
HHJ40_RS01815	COG4650	regulator
HHJ40_RS01820	COG1690	Belongs to the RtcB family
HHJ40_RS01835	COG0058	SHG alpha-glucan phosphorylase activity
HHJ40_RS01840	COG1640	4-alpha-glucanotransferase
HHJ40_RS01845	COG2610	gluconate transmembrane transporter activity
HHJ40_RS01865	COG5464	transposase or invertase
HHJ40_RS01875	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
HHJ40_RS01880	COG1918	ferrous iron import across plasma membrane
HHJ40_RS01885	COG2183	response to ionizing radiation
HHJ40_RS01890	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
HHJ40_RS01895	COG0745	RESPONSE REGULATOR receiver
HHJ40_RS01900	COG2205	protein histidine kinase activity
HHJ40_RS01910	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
HHJ40_RS01920	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
HHJ40_RS01925	COG1011	Hydrolase
HHJ40_RS01935	COG0494	nUDIX hydrolase
HHJ40_RS01940	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
HHJ40_RS01945	COG4972	Pilus assembly protein
HHJ40_RS01950	COG3166	PFAM Fimbrial assembly family protein
HHJ40_RS01965	COG4796	Type ii and iii secretion system protein
HHJ40_RS01980	COG3266	domain, Protein
HHJ40_RS01985	COG0338	D12 class N6 adenine-specific DNA methyltransferase
HHJ40_RS01990	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
HHJ40_RS02000	COG0180	Tryptophanyl-tRNA synthetase
HHJ40_RS02005	COG2188	Transcriptional regulator
HHJ40_RS02015	COG3457	Alanine racemase
HHJ40_RS02020	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
HHJ40_RS02025	COG1735	metal-dependent hydrolase with the TIM-barrel fold
HHJ40_RS02040	COG0626	cystathionine gamma-synthase activity
HHJ40_RS02045	COG2188	Transcriptional regulator
HHJ40_RS02055	COG1082	Xylose isomerase domain protein TIM barrel
HHJ40_RS02060	COG2222	sugar isomerase
HHJ40_RS02065	COG0531	amino acid
HHJ40_RS02080	COG2116	formate transmembrane transporter activity
HHJ40_RS02085	COG2146	nitrite reductase [NAD(P)H] activity
HHJ40_RS02090	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
HHJ40_RS02100	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
HHJ40_RS02110	COG2184	nucleotidyltransferase activity
HHJ40_RS02115	COG0512	Glutamine amidotransferase of anthranilate synthase
HHJ40_RS02120	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
HHJ40_RS02125	COG1289	transmembrane transporter activity
HHJ40_RS02130	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
HHJ40_RS02135	COG1765	OsmC-like protein
HHJ40_RS02140	COG3954	Phosphoribulokinase
HHJ40_RS02150	COG0429	hydrolase of the alpha beta-hydrolase fold
HHJ40_RS02155	COG0488	(ABC) transporter
HHJ40_RS02170	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
HHJ40_RS02175	COG1047	Peptidyl-prolyl cis-trans
HHJ40_RS02185	COG0545	Peptidyl-prolyl cis-trans isomerase
HHJ40_RS02190	COG2964	Protein conserved in bacteria
HHJ40_RS02260	COG0089	rRNA binding
HHJ40_RS02350	COG0201	protein transport
HHJ40_RS02390	COG0789	Transcriptional regulator
HHJ40_RS02395	COG3036	rescue of stalled ribosome
HHJ40_RS02405	COG0569	domain protein
HHJ40_RS02425	COG0758	DNA mediated transformation
HHJ40_RS02435	COG0551	DNA topoisomerase type I activity
HHJ40_RS02455	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
HHJ40_RS02490	COG1126	abc transporter atp-binding protein
HHJ40_RS02495	COG0765	amino acid transport
HHJ40_RS02500	COG4597	amino acid ABC transporter
HHJ40_RS02505	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
HHJ40_RS02515	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
HHJ40_RS02520	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
HHJ40_RS02525	COG1309	transcriptional regulator
HHJ40_RS02535	COG2189	Belongs to the N(4) N(6)-methyltransferase family
HHJ40_RS02545	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
HHJ40_RS02555	COG4145	pantothenate transmembrane transporter activity
HHJ40_RS02560	COG3924	membrane
HHJ40_RS02565	COG0439	Biotin carboxylase
HHJ40_RS02570	COG0511	ligase activity, forming carbon-carbon bonds
HHJ40_RS02575	COG0604	alcohol dehydrogenase
HHJ40_RS02580	COG2199	diguanylate cyclase activity
HHJ40_RS02580	COG2200	EAL domain
HHJ40_RS02585	COG1077	Cell shape determining protein MreB Mrl
HHJ40_RS02590	COG1792	Involved in formation and maintenance of cell shape
HHJ40_RS02595	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
HHJ40_RS02605	COG1530	ribonuclease E activity
HHJ40_RS02610	COG3164	Protein of unknown function
HHJ40_RS02615	COG0312	modulator of DNA gyrase
HHJ40_RS02620	COG0583	DNA-binding transcription factor activity
HHJ40_RS02640	COG2732	(Barnase) inhibitor
HHJ40_RS02660	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
HHJ40_RS02665	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
HHJ40_RS02670	COG3105	Protein conserved in bacteria
HHJ40_RS02675	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
HHJ40_RS02690	COG0625	glutathione transferase activity
HHJ40_RS02695	COG2969	positive regulation of protein catabolic process
HHJ40_RS02700	COG3069	C4-dicarboxylate transmembrane transporter activity
HHJ40_RS02730	COG2731	YhcH YjgK YiaL family protein
HHJ40_RS02735	COG4804	nuclease activity
HHJ40_RS02740	COG0493	'glutamate synthase
HHJ40_RS02745	COG0069	glutamate synthase activity
HHJ40_RS02745	COG0067	glutamate synthase
HHJ40_RS02745	COG0070	glutamate synthase
HHJ40_RS02750	COG1242	4 iron, 4 sulfur cluster binding
HHJ40_RS02755	COG5002	protein histidine kinase activity
HHJ40_RS02755	COG2198	Histidine kinase
HHJ40_RS02755	COG0784	Response regulator, receiver
HHJ40_RS02760	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
HHJ40_RS02770	COG0515	serine threonine protein kinase
HHJ40_RS02775	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ40_RS02790	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
HHJ40_RS02795	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
HHJ40_RS02800	COG1137	ATPase activity
HHJ40_RS02805	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
HHJ40_RS02810	COG3117	lipopolysaccharide transmembrane transporter activity
HHJ40_RS02815	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
HHJ40_RS02820	COG0517	IMP dehydrogenase activity
HHJ40_RS02820	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
HHJ40_RS02825	COG0530	calcium, potassium:sodium antiporter activity
HHJ40_RS02830	COG1127	ABC transporter
HHJ40_RS02835	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
HHJ40_RS02840	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
HHJ40_RS02845	COG2854	intermembrane phospholipid transfer
HHJ40_RS02850	COG3113	response to antibiotic
HHJ40_RS02855	COG5007	Belongs to the BolA IbaG family
HHJ40_RS02865	COG3423	Transcriptional regulator
HHJ40_RS02870	COG0142	geranyltranstransferase activity
HHJ40_RS02885	COG0697	spore germination
HHJ40_RS02895	COG2027	D-alanyl-D-alanine carboxypeptidase
HHJ40_RS02900	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
HHJ40_RS02905	COG1534	Rna-binding protein
HHJ40_RS02915	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
HHJ40_RS02920	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
HHJ40_RS02930	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
HHJ40_RS02940	COG2194	sulfuric ester hydrolase activity
HHJ40_RS02960	COG0195	Participates in both transcription termination and antitermination
HHJ40_RS03000	COG0513	Belongs to the DEAD box helicase family
HHJ40_RS03005	COG0814	amino acid
HHJ40_RS03010	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
HHJ40_RS03015	COG0826	peptidase U32
HHJ40_RS03020	COG0826	peptidase U32
HHJ40_RS03025	COG3154	lipid carrier protein
HHJ40_RS03030	COG3153	acetyltransferase
HHJ40_RS03045	COG0693	protein deglycase activity
HHJ40_RS03050	COG0702	epimerase
HHJ40_RS03055	COG0701	Predicted permease
HHJ40_RS03060	COG2823	Periplasmic or secreted lipoprotein
HHJ40_RS03080	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
HHJ40_RS03085	COG3539	Fimbrial protein
HHJ40_RS03090	COG3188	usher protein
HHJ40_RS03095	COG3121	Chaperone
HHJ40_RS03100	COG3539	Fimbrial protein
HHJ40_RS03105	COG0363	glucosamine-6-phosphate deaminase activity
HHJ40_RS03110	COG3716	PTS system mannose fructose sorbose family IID component
HHJ40_RS03115	COG3715	PTS system
HHJ40_RS03120	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
HHJ40_RS03130	COG2222	sugar isomerase
HHJ40_RS03135	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
HHJ40_RS03140	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ40_RS03145	COG3716	PTS system mannose fructose sorbose family IID component
HHJ40_RS03155	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
HHJ40_RS03165	COG1349	DNA-binding transcription factor activity
HHJ40_RS03175	COG2002	toxin-antitoxin pair type II binding
HHJ40_RS03180	COG2721	sulfolactate sulfo-lyase activity
HHJ40_RS03185	COG2271	Major facilitator Superfamily
HHJ40_RS03195	COG2084	Dehydrogenase
HHJ40_RS03200	COG1929	Belongs to the glycerate kinase type-1 family
HHJ40_RS03230	COG0583	DNA-binding transcription factor activity
HHJ40_RS03235	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
HHJ40_RS03245	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
HHJ40_RS03250	COG1882	Formate acetyltransferase
HHJ40_RS03255	COG0251	oxidation-reduction process
HHJ40_RS03260	COG1760	l-serine dehydratase
HHJ40_RS03265	COG0814	amino acid
HHJ40_RS03280	COG1741	Belongs to the pirin family
HHJ40_RS03285	COG0583	DNA-binding transcription factor activity
HHJ40_RS03290	COG3152	Membrane
HHJ40_RS03295	COG3152	Membrane
HHJ40_RS03300	COG0435	Glutathione S-transferase
HHJ40_RS03305	COG2259	Doxx family
HHJ40_RS03315	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
HHJ40_RS03320	COG4575	ribosome binding
HHJ40_RS03325	COG1422	Protein of unknown function (DUF1090)
HHJ40_RS03335	COG0586	Pfam SNARE associated Golgi protein
HHJ40_RS03340	COG2186	Transcriptional regulator
HHJ40_RS03365	COG2271	Major facilitator Superfamily
HHJ40_RS03375	COG2721	sulfolactate sulfo-lyase activity
HHJ40_RS03385	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
HHJ40_RS03390	COG0861	Integral membrane protein TerC family
HHJ40_RS03395	COG0673	inositol 2-dehydrogenase activity
HHJ40_RS03400	COG2949	membrane
HHJ40_RS03405	COG1451	nucleotide metabolic process
HHJ40_RS03415	COG0446	pyridine nucleotide-disulphide oxidoreductase
HHJ40_RS03415	COG1902	pentaerythritol trinitrate reductase activity
HHJ40_RS03420	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
HHJ40_RS03420	COG3408	Glycogen debranching enzyme
HHJ40_RS03430	COG0531	amino acid
HHJ40_RS03435	COG2731	YhcH YjgK YiaL family protein
HHJ40_RS03440	COG3250	beta-galactosidase activity
HHJ40_RS03445	COG1609	Transcriptional regulator
HHJ40_RS03450	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
HHJ40_RS03460	COG0840	transmembrane signaling receptor activity
HHJ40_RS03465	COG1695	Transcriptional regulator
HHJ40_RS03470	COG2375	cellular response to nickel ion
HHJ40_RS03485	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
HHJ40_RS03490	COG0358	DNA primase activity
HHJ40_RS03495	COG0828	Belongs to the bacterial ribosomal protein bS21 family
HHJ40_RS03510	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
HHJ40_RS03515	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
HHJ40_RS03520	COG0583	DNA-binding transcription factor activity
HHJ40_RS03530	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
HHJ40_RS03545	COG4991	sh3 domain protein
HHJ40_RS03550	COG3025	triphosphatase activity
HHJ40_RS03575	COG2268	Band 7 protein
HHJ40_RS03580	COG1585	Membrane protein implicated in regulation of membrane protease activity
HHJ40_RS03590	COG3539	Fimbrial protein
HHJ40_RS03595	COG3121	Chaperone
HHJ40_RS03600	COG3188	usher protein
HHJ40_RS03605	COG3539	Fimbrial protein
HHJ40_RS03610	COG2960	long-chain fatty acid transporting porin activity
HHJ40_RS03630	COG3384	dioxygenase
HHJ40_RS03635	COG0754	glutathionylspermidine amidase activity
HHJ40_RS03645	COG1538	Outer membrane efflux protein
HHJ40_RS03650	COG0494	nUDIX hydrolase
HHJ40_RS03655	COG3151	Protein conserved in bacteria
HHJ40_RS03660	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
HHJ40_RS03665	COG3150	esterase
HHJ40_RS03670	COG0187	DNA topoisomerase II activity
HHJ40_RS03675	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
HHJ40_RS03680	COG2249	NAD(P)H dehydrogenase (quinone) activity
HHJ40_RS03690	COG0642	Histidine kinase
HHJ40_RS03695	COG0745	RESPONSE REGULATOR receiver
HHJ40_RS03700	COG3111	PFAM Bacterial OB fold (BOF) protein
HHJ40_RS03705	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
HHJ40_RS03710	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
HHJ40_RS03715	COG0204	Acyl-transferase
HHJ40_RS03720	COG2132	Multicopper oxidase
HHJ40_RS03725	COG1032	radical SAM domain protein
HHJ40_RS03730	COG4238	major outer membrane lipoprotein
HHJ40_RS03740	COG0656	L-ascorbic acid biosynthetic process
HHJ40_RS03745	COG1979	alcohol dehydrogenase
HHJ40_RS03750	COG2207	Transcriptional regulator
HHJ40_RS03755	COG0586	Pfam SNARE associated Golgi protein
HHJ40_RS03760	COG0626	cystathionine gamma-synthase activity
HHJ40_RS03765	COG0811	peptide transport
HHJ40_RS03770	COG0848	biopolymer transport protein
HHJ40_RS03775	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ40_RS03785	COG0667	Aldo Keto reductase
HHJ40_RS03800	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
HHJ40_RS03805	COG0437	4 iron, 4 sulfur cluster binding
HHJ40_RS03810	COG5557	Pfam Polysulphide reductase, NrfD
HHJ40_RS03815	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
HHJ40_RS03820	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
HHJ40_RS03825	COG1773	rubredoxin
HHJ40_RS03835	COG0298	carbon dioxide binding
HHJ40_RS03840	COG3547	Transposase (IS116 IS110 IS902 family)
HHJ40_RS03845	COG0625	glutathione transferase activity
HHJ40_RS03850	COG0754	glutathionylspermidine amidase activity
HHJ40_RS03855	COG0306	phosphate transporter
HHJ40_RS03860	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
HHJ40_RS03865	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
HHJ40_RS03870	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
HHJ40_RS03875	COG2244	polysaccharide biosynthetic process
HHJ40_RS03885	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
HHJ40_RS03890	COG0795	lipopolysaccharide-transporting ATPase activity
HHJ40_RS03900	COG0156	8-amino-7-oxononanoate synthase activity
HHJ40_RS03905	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
HHJ40_RS03915	COG0318	PFAM AMP-dependent synthetase and ligase
HHJ40_RS03920	COG0456	acetyltransferase
HHJ40_RS03925	COG2186	Transcriptional regulator
HHJ40_RS03930	COG0277	FAD linked oxidase domain protein
HHJ40_RS03935	COG0277	FAD linked oxidase domain protein
HHJ40_RS03940	COG0247	lactate metabolic process
HHJ40_RS03945	COG3193	protein, possibly involved in utilization of glycolate and propanediol
HHJ40_RS03950	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
HHJ40_RS03955	COG1620	l-lactate permease
HHJ40_RS03985	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
HHJ40_RS03990	COG1459	type II secretion system
HHJ40_RS03995	COG2165	general secretion pathway protein
HHJ40_RS04010	COG4795	General secretion pathway protein
HHJ40_RS04025	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
HHJ40_RS04035	COG1811	Na channel or pump
HHJ40_RS04040	COG1982	Orn Lys Arg decarboxylase major
HHJ40_RS04045	COG2211	Major facilitator Superfamily
HHJ40_RS04060	COG1194	a g-specific adenine glycosylase
HHJ40_RS04070	COG3171	Protein conserved in bacteria
HHJ40_RS04080	COG0252	asparaginase activity
HHJ40_RS04090	COG0635	Involved in the biosynthesis of porphyrin-containing compound
HHJ40_RS04105	COG0762	integral membrane protein
HHJ40_RS04110	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
HHJ40_RS04115	COG2805	Type II/IV secretion system protein
HHJ40_RS04130	COG0189	ligase activity
HHJ40_RS04135	COG1385	rRNA (uridine-N3-)-methyltransferase activity
HHJ40_RS04140	COG2356	endonuclease I
HHJ40_RS04150	COG2814	Major facilitator Superfamily
HHJ40_RS04170	COG1166	arginine decarboxylase activity
HHJ40_RS04195	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
HHJ40_RS04195	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ40_RS04200	COG3715	PTS system
HHJ40_RS04205	COG3716	PTS system mannose fructose sorbose family IID component
HHJ40_RS04220	COG0501	Belongs to the peptidase M48B family
HHJ40_RS04225	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
HHJ40_RS04230	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ40_RS04235	COG2213	PTS system mannitol-specific
HHJ40_RS04240	COG1063	alcohol dehydrogenase
HHJ40_RS04245	COG1494	fructose-1,6-bisphosphatase
HHJ40_RS04255	COG1072	(Pantothenic acid kinase))
HHJ40_RS04260	COG1122	ATPase activity
HHJ40_RS04265	COG1122	ATPase activity
HHJ40_RS04295	COG0191	fructose-bisphosphate aldolase activity
HHJ40_RS04300	COG0668	transmembrane transport
HHJ40_RS04310	COG2968	Membrane
HHJ40_RS04315	COG0583	DNA-binding transcription factor activity
HHJ40_RS04320	COG0427	acetyl-CoA hydrolase
HHJ40_RS04325	COG1024	Enoyl-CoA hydratase
HHJ40_RS04330	COG1703	isobutyryl-CoA mutase activity
HHJ40_RS04335	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
HHJ40_RS04335	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
HHJ40_RS04355	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
HHJ40_RS04370	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
HHJ40_RS04390	COG0006	proline dipeptidase activity
HHJ40_RS04395	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
HHJ40_RS04400	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
HHJ40_RS04425	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ40_RS04430	COG2723	6-phospho-beta-galactosidase activity
HHJ40_RS04440	COG1272	protein, Hemolysin III
HHJ40_RS04450	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
HHJ40_RS04460	COG0716	FMN binding
HHJ40_RS04465	COG4974	Belongs to the 'phage' integrase family
HHJ40_RS04470	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
HHJ40_RS04475	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
HHJ40_RS04505	COG2233	PERMEase
HHJ40_RS04515	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
HHJ40_RS04520	COG2252	PERMEase
HHJ40_RS04525	COG0402	S-adenosylhomocysteine deaminase activity
HHJ40_RS04530	COG2233	PERMEase
HHJ40_RS04535	COG1529	Aldehyde oxidase and xanthine dehydrogenase
HHJ40_RS04535	COG2080	2 iron, 2 sulfur cluster binding
HHJ40_RS04540	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
HHJ40_RS04545	COG0402	S-adenosylhomocysteine deaminase activity
HHJ40_RS04550	COG0493	'glutamate synthase
HHJ40_RS04550	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
HHJ40_RS04555	COG2068	MobA-Related Protein
HHJ40_RS04560	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
HHJ40_RS04565	COG3608	succinylglutamate desuccinylase aspartoacylase
HHJ40_RS04565	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
HHJ40_RS04570	COG0549	Belongs to the carbamate kinase family
HHJ40_RS04580	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
HHJ40_RS04585	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
HHJ40_RS04590	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
HHJ40_RS04600	COG2080	2 iron, 2 sulfur cluster binding
HHJ40_RS04605	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
HHJ40_RS04610	COG1529	Aldehyde oxidase and xanthine dehydrogenase
HHJ40_RS04615	COG4942	peptidase
HHJ40_RS04625	COG3387	PFAM Glycoside hydrolase 15-related
HHJ40_RS04715	COG0457	Tetratricopeptide repeat
HHJ40_RS04715	COG3710	Transcriptional regulator
HHJ40_RS04720	COG0457	Tetratricopeptide repeat
HHJ40_RS04745	COG3710	Transcriptional regulator
HHJ40_RS04750	COG2771	luxR family
HHJ40_RS04760	COG0183	Belongs to the thiolase family
HHJ40_RS04770	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ40_RS04775	COG2814	Major facilitator Superfamily
HHJ40_RS04780	COG1794	racemase activity, acting on amino acids and derivatives
HHJ40_RS04785	COG0583	DNA-binding transcription factor activity
HHJ40_RS04795	COG1609	Transcriptional regulator
HHJ40_RS04810	COG0667	Aldo Keto reductase
HHJ40_RS04820	COG0861	Integral membrane protein TerC family
HHJ40_RS04835	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
HHJ40_RS04850	COG2165	general secretion pathway protein
HHJ40_RS04855	COG4795	General secretion pathway protein
HHJ40_RS04870	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
HHJ40_RS04875	COG1025	Belongs to the peptidase M16 family
HHJ40_RS04880	COG1074	ATP-dependent DNA helicase activity
HHJ40_RS04885	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
HHJ40_RS04890	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
HHJ40_RS04890	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
HHJ40_RS04895	COG0860	N-Acetylmuramoyl-L-alanine amidase
HHJ40_RS04990	COG2885	chlorophyll binding
HHJ40_RS05025	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
HHJ40_RS05030	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
HHJ40_RS05035	COG2166	iron-sulfur cluster assembly
HHJ40_RS05040	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
HHJ40_RS05050	COG0583	DNA-binding transcription factor activity
HHJ40_RS05055	COG2363	Small membrane protein
HHJ40_RS05065	COG1349	DNA-binding transcription factor activity
HHJ40_RS05075	COG1070	Carbohydrate kinase
HHJ40_RS05085	COG0738	Major facilitator superfamily
HHJ40_RS05090	COG0235	Class ii aldolase
HHJ40_RS05095	COG1454	alcohol dehydrogenase
HHJ40_RS05105	COG1760	l-serine dehydratase
HHJ40_RS05110	COG0814	amino acid
HHJ40_RS05115	COG1611	Belongs to the LOG family
HHJ40_RS05130	COG3098	single-species biofilm formation
HHJ40_RS05135	COG0564	pseudouridine synthase activity
HHJ40_RS05140	COG0716	FMN binding
HHJ40_RS05145	COG2271	Major facilitator Superfamily
HHJ40_RS05150	COG4948	Mandelate Racemase Muconate Lactonizing
HHJ40_RS05155	COG4948	Mandelate Racemase Muconate Lactonizing
HHJ40_RS05160	COG3437	response regulator, receiver
HHJ40_RS05160	COG2205	protein histidine kinase activity
HHJ40_RS05160	COG4999	Histidine kinase
HHJ40_RS05160	COG3850	Histidine kinase
HHJ40_RS05165	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
HHJ40_RS05170	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
HHJ40_RS05175	COG2336	PFAM SpoVT AbrB
HHJ40_RS05180	COG2337	Toxic component of a toxin-antitoxin (TA) module
HHJ40_RS05185	COG3956	TIGRFAM MazG family protein
HHJ40_RS05200	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
HHJ40_RS05210	COG0602	queuosine metabolic process
HHJ40_RS05215	COG1070	Carbohydrate kinase
HHJ40_RS05225	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ40_RS05230	COG0277	FAD linked oxidase domain protein
HHJ40_RS05235	COG0477	Major facilitator Superfamily
HHJ40_RS05240	COG2086	electron transfer activity
HHJ40_RS05245	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
HHJ40_RS05250	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
HHJ40_RS05255	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
HHJ40_RS05260	COG0644	oxidoreductase
HHJ40_RS05265	COG0720	synthase
HHJ40_RS05290	COG1203	CRISPR-associated helicase, Cas3
HHJ40_RS05305	COG1857	crispr-associated protein
HHJ40_RS05320	COG1518	maintenance of DNA repeat elements
HHJ40_RS05325	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
HHJ40_RS05330	COG2234	aminopeptidase activity
HHJ40_RS05385	COG4942	peptidase
HHJ40_RS05385	COG1388	LysM domain
HHJ40_RS05390	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
HHJ40_RS05405	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
HHJ40_RS05415	COG2610	gluconate transmembrane transporter activity
HHJ40_RS05420	COG3622	Belongs to the hyi family
HHJ40_RS05425	COG0235	Class ii aldolase
HHJ40_RS05430	COG3395	kinase activity
HHJ40_RS05435	COG2084	Dehydrogenase
HHJ40_RS05440	COG1349	DNA-binding transcription factor activity
HHJ40_RS05445	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
HHJ40_RS05465	COG3604	Transcriptional regulator
HHJ40_RS05470	COG0309	Hydrogenase expression formation protein (HypE)
HHJ40_RS05475	COG0409	Hydrogenase expression formation protein
HHJ40_RS05480	COG0298	carbon dioxide binding
HHJ40_RS05485	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
HHJ40_RS05490	COG0375	protein maturation
HHJ40_RS05500	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
HHJ40_RS05505	COG0651	ATP synthesis coupled electron transport
HHJ40_RS05510	COG0650	Formate hydrogenlyase subunit 4
HHJ40_RS05515	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
HHJ40_RS05515	COG3261	NADH dehydrogenase
HHJ40_RS05520	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
HHJ40_RS05525	COG3260	NADH ubiquinone oxidoreductase 20
HHJ40_RS05535	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
HHJ40_RS05540	COG3547	Transposase (IS116 IS110 IS902 family)
HHJ40_RS05545	COG2723	6-phospho-beta-galactosidase activity
HHJ40_RS05550	COG1263	PTS System
HHJ40_RS05550	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
HHJ40_RS05555	COG1609	Transcriptional regulator
HHJ40_RS05560	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
HHJ40_RS05565	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
HHJ40_RS05590	COG1349	DNA-binding transcription factor activity
HHJ40_RS05595	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ40_RS05600	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ40_RS05610	COG3732	PTS system glucitol sorbitol-specific
HHJ40_RS05615	COG3730	PTS system glucitol sorbitol-specific
HHJ40_RS05620	COG2951	lytic endotransglycosylase activity
HHJ40_RS05625	COG1546	Belongs to the CinA family
HHJ40_RS05645	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
HHJ40_RS05670	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
HHJ40_RS05675	COG1238	metal cluster binding
HHJ40_RS05690	COG2814	Major facilitator Superfamily
HHJ40_RS05695	COG1566	PFAM secretion protein HlyD family protein
HHJ40_RS05700	COG1846	Transcriptional regulator
HHJ40_RS05715	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
HHJ40_RS05720	COG2814	Major facilitator Superfamily
HHJ40_RS05725	COG2113	Glycine betaine
HHJ40_RS05730	COG4176	ABC-type proline glycine betaine transport system permease component
HHJ40_RS05735	COG4175	Glycine betaine
HHJ40_RS05740	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
HHJ40_RS05745	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
HHJ40_RS05755	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
HHJ40_RS05760	COG4575	ribosome binding
HHJ40_RS05775	COG2916	Histone family protein nucleoid-structuring protein H-NS
HHJ40_RS05780	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
HHJ40_RS05785	COG0640	Transcriptional regulator
HHJ40_RS05790	COG0401	homolog of Blt101
HHJ40_RS05795	COG1652	LysM domain
HHJ40_RS05800	COG1802	Transcriptional regulator
HHJ40_RS05805	COG1113	amino acid transport
HHJ40_RS05810	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
HHJ40_RS05815	COG1012	belongs to the aldehyde dehydrogenase family
HHJ40_RS05820	COG0579	oxidoreductase
HHJ40_RS05855	COG0582	viral genome integration into host DNA
HHJ40_RS05870	COG2867	negative regulation of translational initiation
HHJ40_RS05880	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
HHJ40_RS05885	COG0497	DNA recombination
HHJ40_RS05905	COG4536	flavin adenine dinucleotide binding
HHJ40_RS05910	COG4137	Cytochrome C assembly protein
HHJ40_RS05915	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
HHJ40_RS05940	COG2885	chlorophyll binding
HHJ40_RS05945	COG2199	diguanylate cyclase activity
HHJ40_RS05960	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
HHJ40_RS05965	COG0287	Prephenate dehydrogenase
HHJ40_RS05965	COG1605	Chorismate mutase
HHJ40_RS05970	COG0077	Prephenate dehydratase
HHJ40_RS05970	COG1605	Chorismate mutase
HHJ40_RS05980	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
HHJ40_RS05985	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
HHJ40_RS05990	COG0564	pseudouridine synthase activity
HHJ40_RS06000	COG0542	response to heat
HHJ40_RS06025	COG0477	Major facilitator Superfamily
HHJ40_RS06030	COG5544	Lipoprotein
HHJ40_RS06035	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
HHJ40_RS06040	COG0045	succinate-CoA ligase (ADP-forming) activity
HHJ40_RS06040	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
HHJ40_RS06040	COG1042	CoA-binding domain protein
HHJ40_RS06050	COG3118	belongs to the thioredoxin family
HHJ40_RS06055	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
HHJ40_RS06075	COG0583	DNA-binding transcription factor activity
HHJ40_RS06080	COG0513	Belongs to the DEAD box helicase family
HHJ40_RS06090	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
HHJ40_RS06100	COG1595	DNA-templated transcription, initiation
HHJ40_RS06105	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
HHJ40_RS06110	COG3026	antisigma factor binding
HHJ40_RS06115	COG3086	response to oxidative stress
HHJ40_RS06125	COG0681	Belongs to the peptidase S26 family
HHJ40_RS06145	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
HHJ40_RS06160	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
HHJ40_RS06165	COG1737	Transcriptional regulator
HHJ40_RS06170	COG0560	Phosphoserine phosphatase
HHJ40_RS06190	COG2205	protein histidine kinase activity
HHJ40_RS06195	COG3170	Tfp pilus assembly protein FimV
HHJ40_RS06200	COG2204	response regulator
HHJ40_RS06205	COG0347	Belongs to the P(II) protein family
HHJ40_RS06210	COG1017	nitric oxide dioxygenase activity
HHJ40_RS06210	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
HHJ40_RS06220	COG1940	carbohydrate kinase activity
HHJ40_RS06225	COG0457	Tetratricopeptide repeat
HHJ40_RS06230	COG1879	ABC-type sugar transport system periplasmic component
HHJ40_RS06235	COG1129	ABC transporter
HHJ40_RS06240	COG1172	Belongs to the binding-protein-dependent transport system permease family
HHJ40_RS06245	COG1063	alcohol dehydrogenase
HHJ40_RS06250	COG2017	converts alpha-aldose to the beta-anomer
HHJ40_RS06255	COG2259	Doxx family
HHJ40_RS06280	COG4638	Rieske (2fe-2S)
HHJ40_RS06285	COG0583	DNA-binding transcription factor activity
HHJ40_RS06290	COG2814	Major facilitator Superfamily
HHJ40_RS06295	COG3711	transcriptional antiterminator
HHJ40_RS06300	COG1073	alpha beta
HHJ40_RS06305	COG0483	inositol monophosphate 1-phosphatase activity
HHJ40_RS06325	COG0822	iron-sulfur transferase activity
HHJ40_RS06345	COG0633	Ferredoxin
HHJ40_RS06350	COG2975	iron-sulfur cluster assembly
HHJ40_RS06365	COG2897	thiosulfate sulfurtransferase activity
HHJ40_RS06370	COG2373	Large extracellular alpha-helical protein
HHJ40_RS06375	COG4953	penicillin-binding protein 1C
HHJ40_RS06405	COG2976	Protein conserved in bacteria
HHJ40_RS06420	COG1645	bacterial-type flagellum-dependent swarming motility
HHJ40_RS06430	COG0516	GMP reductase activity
HHJ40_RS06430	COG0517	IMP dehydrogenase activity
HHJ40_RS06445	COG3133	Outer membrane lipoprotein
HHJ40_RS06460	COG2200	EAL domain
HHJ40_RS06465	COG0248	Ppx GppA phosphatase
HHJ40_RS06470	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
HHJ40_RS06475	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
HHJ40_RS06490	COG2233	PERMEase
HHJ40_RS06500	COG1393	Belongs to the ArsC family
HHJ40_RS06505	COG4783	chaperone-mediated protein folding
HHJ40_RS06510	COG0628	permease
HHJ40_RS06515	COG2116	formate transmembrane transporter activity
HHJ40_RS06520	COG3604	Transcriptional regulator
HHJ40_RS06535	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
HHJ40_RS06540	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
HHJ40_RS06540	COG3261	NADH dehydrogenase
HHJ40_RS06545	COG0651	ATP synthesis coupled electron transport
HHJ40_RS06550	COG4237	Hydrogenase 4 membrane
HHJ40_RS06560	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
HHJ40_RS06565	COG0650	Formate hydrogenlyase subunit 4
HHJ40_RS06570	COG0651	ATP synthesis coupled electron transport
HHJ40_RS06575	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
HHJ40_RS06580	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
HHJ40_RS06585	COG2716	regulation of RNA biosynthetic process
HHJ40_RS06595	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
HHJ40_RS06615	COG2321	neutral zinc metallopeptidase
HHJ40_RS06625	COG0400	carboxylic ester hydrolase activity
HHJ40_RS06640	COG1393	Belongs to the ArsC family
HHJ40_RS06650	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
HHJ40_RS06655	COG3850	Histidine kinase
HHJ40_RS06660	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
HHJ40_RS06660	COG0493	'glutamate synthase
HHJ40_RS06670	COG5342	invasion associated locus B
HHJ40_RS06675	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
HHJ40_RS06680	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
HHJ40_RS06685	COG0280	phosphate acetyltransferase
HHJ40_RS06685	COG0281	malic enzyme
HHJ40_RS06690	COG4810	utilization protein
HHJ40_RS06695	COG4917	ethanolamine utilization protein
HHJ40_RS06700	COG4766	ethanolamine catabolic process
HHJ40_RS06705	COG4812	Cobalamin adenosyltransferase
HHJ40_RS06710	COG0280	phosphate acetyltransferase
HHJ40_RS06715	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
HHJ40_RS06720	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
HHJ40_RS06725	COG1012	belongs to the aldehyde dehydrogenase family
HHJ40_RS06730	COG4820	ethanolamine utilization protein (EutJ)
HHJ40_RS06735	COG1454	alcohol dehydrogenase
HHJ40_RS06740	COG3192	ethanolamine utilization protein
HHJ40_RS06745	COG4819	ethanolamine utilization protein
HHJ40_RS06750	COG4303	Ethanolamine ammonia lyase large subunit
HHJ40_RS06765	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
HHJ40_RS06770	COG2207	Transcriptional regulator
HHJ40_RS06780	COG0860	N-Acetylmuramoyl-L-alanine amidase
HHJ40_RS06800	COG2837	iron assimilation
HHJ40_RS06805	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
HHJ40_RS06810	COG1263	PTS System
HHJ40_RS06810	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
HHJ40_RS06825	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ40_RS06830	COG4150	thiosulfate binding
HHJ40_RS06835	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
HHJ40_RS06840	COG4208	sulfate ABC transporter
HHJ40_RS06845	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
HHJ40_RS06850	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
HHJ40_RS06865	COG2190	(PTS) system
HHJ40_RS06870	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
HHJ40_RS06875	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ40_RS06880	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
HHJ40_RS06900	COG3530	Putative quorum-sensing-regulated virulence factor
HHJ40_RS06905	COG0385	Bile acid
HHJ40_RS06910	COG0583	DNA-binding transcription factor activity
HHJ40_RS06950	COG3415	Transposase
HHJ40_RS06955	COG3415	Transposase
HHJ40_RS06970	COG2199	diguanylate cyclase activity
HHJ40_RS06970	COG2200	EAL domain
HHJ40_RS06975	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
HHJ40_RS07000	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
HHJ40_RS07005	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
HHJ40_RS07010	COG0006	proline dipeptidase activity
HHJ40_RS07015	COG1363	Peptidase, m42
HHJ40_RS07025	COG2207	Transcriptional regulator
HHJ40_RS07030	COG3279	Response regulator of the LytR AlgR family
HHJ40_RS07035	COG3275	phosphorelay sensor kinase activity
HHJ40_RS07040	COG0436	Aminotransferase
HHJ40_RS07050	COG1560	Kdo2-lipid A biosynthetic process
HHJ40_RS07075	COG0028	Belongs to the TPP enzyme family
HHJ40_RS07080	COG0679	Auxin Efflux Carrier
HHJ40_RS07085	COG1804	L-carnitine dehydratase bile acid-inducible protein F
HHJ40_RS07090	COG0784	Response regulator, receiver
HHJ40_RS07090	COG2198	Histidine kinase
HHJ40_RS07090	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
HHJ40_RS07090	COG2205	protein histidine kinase activity
HHJ40_RS07095	COG2197	response regulator
HHJ40_RS07100	COG1566	PFAM secretion protein HlyD family protein
HHJ40_RS07105	COG0477	Major facilitator Superfamily
HHJ40_RS07145	COG2116	formate transmembrane transporter activity
HHJ40_RS07150	COG2853	Lipoprotein
HHJ40_RS07160	COG2067	long-chain fatty acid transport protein
HHJ40_RS07165	COG3691	Protein conserved in bacteria
HHJ40_RS07180	COG2062	phosphohistidine phosphatase, SixA
HHJ40_RS07185	COG3539	Fimbrial protein
HHJ40_RS07190	COG3188	usher protein
HHJ40_RS07195	COG3121	Chaperone
HHJ40_RS07200	COG3539	Fimbrial protein
HHJ40_RS07205	COG3539	Fimbrial protein
HHJ40_RS07210	COG3539	Fimbrial protein
HHJ40_RS07240	COG0730	response to heat
HHJ40_RS07245	COG3101	peptidyl-lysine hydroxylation
HHJ40_RS07260	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
HHJ40_RS07265	COG2814	Major facilitator Superfamily
HHJ40_RS07330	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
HHJ40_RS07350	COG5301	cellulose 1,4-beta-cellobiosidase activity
HHJ40_RS07350	COG5301	cellulose 1,4-beta-cellobiosidase activity
HHJ40_RS07430	COG4695	Portal protein
HHJ40_RS07515	COG4974	Belongs to the 'phage' integrase family
HHJ40_RS07525	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
HHJ40_RS07535	COG0586	Pfam SNARE associated Golgi protein
HHJ40_RS07545	COG0285	dihydrofolate synthase activity
HHJ40_RS07550	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
HHJ40_RS07555	COG1286	toxin biosynthetic process
HHJ40_RS07560	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
HHJ40_RS07565	COG0163	prenyltransferase activity
HHJ40_RS07570	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
HHJ40_RS07575	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
HHJ40_RS07580	COG4215	(ABC) transporter
HHJ40_RS07585	COG4160	amino acid transport
HHJ40_RS07590	COG4598	ABC transporter
HHJ40_RS07595	COG5464	transposase or invertase
HHJ40_RS07600	COG1090	epimerase
HHJ40_RS07605	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
HHJ40_RS07610	COG0625	glutathione transferase activity
HHJ40_RS07615	COG0625	glutathione transferase activity
HHJ40_RS07620	COG0622	Phosphoesterase
HHJ40_RS07625	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
HHJ40_RS07630	COG1288	antiporter activity
HHJ40_RS07635	COG0857	belongs to the CobB CobQ family
HHJ40_RS07635	COG0280	phosphate acetyltransferase
HHJ40_RS07640	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
HHJ40_RS07655	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
HHJ40_RS07660	COG0471	metal ion transport
HHJ40_RS07660	COG0490	domain, Protein
HHJ40_RS07670	COG0436	Aminotransferase
HHJ40_RS07675	COG0583	DNA-binding transcription factor activity
HHJ40_RS07695	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
HHJ40_RS07700	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
HHJ40_RS07705	COG1034	ATP synthesis coupled electron transport
HHJ40_RS07720	COG0839	Belongs to the complex I subunit 6 family
HHJ40_RS07730	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
HHJ40_RS07735	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
HHJ40_RS07765	COG2153	protein acetylation
HHJ40_RS07770	COG4575	ribosome binding
HHJ40_RS07775	COG1169	isochorismate synthase
HHJ40_RS07790	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
HHJ40_RS07800	COG0318	PFAM AMP-dependent synthetase and ligase
HHJ40_RS07870	COG5464	transposase or invertase
HHJ40_RS07875	COG0247	lactate metabolic process
HHJ40_RS07885	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
HHJ40_RS07890	COG2271	Major facilitator Superfamily
HHJ40_RS07895	COG0584	glycerophosphoryl diester phosphodiesterase
HHJ40_RS07905	COG3642	lipopolysaccharide core region biosynthetic process
HHJ40_RS07910	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
HHJ40_RS07915	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
HHJ40_RS07920	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
HHJ40_RS07925	COG3468	outer membrane autotransporter barrel domain protein
HHJ40_RS07935	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
HHJ40_RS07940	COG4685	Uncharacterized protein conserved in bacteria (DUF2138)
HHJ40_RS07945	COG3234	Protein of unknown function (DUF1175)
HHJ40_RS07950	COG2373	Large extracellular alpha-helical protein
HHJ40_RS07955	COG5445	Predicted secreted protein (DUF2300)
HHJ40_RS07960	COG4676	Protein conserved in bacteria
HHJ40_RS07965	COG2205	protein histidine kinase activity
HHJ40_RS07965	COG0784	Response regulator, receiver
HHJ40_RS07970	COG2197	response regulator
HHJ40_RS07975	COG0642	Histidine kinase
HHJ40_RS07975	COG2198	Histidine kinase
HHJ40_RS07980	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
HHJ40_RS07985	COG1477	protein flavinylation
HHJ40_RS07990	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
HHJ40_RS07990	COG2169	Transcriptional regulator
HHJ40_RS07995	COG3145	DNA-N1-methyladenine dioxygenase activity
HHJ40_RS08000	COG4615	Cyclic peptide transporter
HHJ40_RS08015	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
HHJ40_RS08015	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
HHJ40_RS08020	COG3062	negative regulation of establishment of protein localization
HHJ40_RS08030	COG0437	4 iron, 4 sulfur cluster binding
HHJ40_RS08035	COG0348	domain, Protein
HHJ40_RS08040	COG3043	anaerobic respiration
HHJ40_RS08045	COG3005	denitrification pathway
HHJ40_RS08050	COG4133	protoheme IX ABC transporter activity
HHJ40_RS08055	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
HHJ40_RS08060	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
HHJ40_RS08065	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
HHJ40_RS08075	COG1138	Cytochrome C-type biogenesis protein
HHJ40_RS08080	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
HHJ40_RS08085	COG4235	cytochrome complex assembly
HHJ40_RS08085	COG3088	subunit of a heme lyase
HHJ40_RS08090	COG2197	response regulator
HHJ40_RS08105	COG3083	sulfuric ester hydrolase activity
HHJ40_RS08125	COG1061	Type III restriction enzyme res subunit
HHJ40_RS08130	COG1187	pseudouridine synthase activity
HHJ40_RS08135	COG2814	Major facilitator Superfamily
HHJ40_RS08145	COG4172	Belongs to the ABC transporter superfamily
HHJ40_RS08150	COG4239	(ABC) transporter, permease
HHJ40_RS08155	COG4174	ABC transporter (Permease)
HHJ40_RS08160	COG4166	transmembrane transport
HHJ40_RS08165	COG2200	EAL domain
HHJ40_RS08170	COG0791	NLP P60 protein
HHJ40_RS08175	COG0671	phosphoesterase, PA-phosphatase related
HHJ40_RS08180	COG0523	cobalamin synthesis protein
HHJ40_RS08185	COG0246	Mannitol dehydrogenase
HHJ40_RS08200	COG2814	Major facilitator Superfamily
HHJ40_RS08205	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ40_RS08205	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ40_RS08210	COG1105	Belongs to the carbohydrate kinase PfkB family
HHJ40_RS08215	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
HHJ40_RS08215	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
HHJ40_RS08215	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
HHJ40_RS08220	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
HHJ40_RS08225	COG2313	pseudouridylate synthase activity
HHJ40_RS08230	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
HHJ40_RS08235	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
HHJ40_RS08245	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
HHJ40_RS08250	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
HHJ40_RS08250	COG1522	sequence-specific DNA binding
HHJ40_RS08260	COG2855	membrane
HHJ40_RS08265	COG0583	DNA-binding transcription factor activity
HHJ40_RS08270	COG0833	amino acid
HHJ40_RS08275	COG4771	TonB-dependent receptor
HHJ40_RS08290	COG2311	Membrane
HHJ40_RS08295	COG1609	Transcriptional regulator
HHJ40_RS08300	COG1879	ABC-type sugar transport system periplasmic component
HHJ40_RS08305	COG1129	ABC transporter
HHJ40_RS08310	COG4211	Belongs to the binding-protein-dependent transport system permease family
HHJ40_RS08315	COG0167	dihydroorotate dehydrogenase activity
HHJ40_RS08315	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
HHJ40_RS08320	COG0493	'glutamate synthase
HHJ40_RS08330	COG2949	membrane
HHJ40_RS08340	COG1346	cytolysis
HHJ40_RS08350	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
HHJ40_RS08365	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ40_RS08370	COG0586	Pfam SNARE associated Golgi protein
HHJ40_RS08380	COG1686	Belongs to the peptidase S11 family
HHJ40_RS08385	COG0277	FAD linked oxidase domain protein
HHJ40_RS08390	COG1472	Belongs to the glycosyl hydrolase 3 family
HHJ40_RS08395	COG1732	Glycine betaine
HHJ40_RS08400	COG1174	glycine betaine transport
HHJ40_RS08405	COG1125	glycine betaine transport
HHJ40_RS08410	COG1174	glycine betaine transport
HHJ40_RS08420	COG0789	Transcriptional regulator
HHJ40_RS08425	COG3275	phosphorelay sensor kinase activity
HHJ40_RS08430	COG3279	Response regulator of the LytR AlgR family
HHJ40_RS08435	COG4807	Protein conserved in bacteria
HHJ40_RS08440	COG4808	Protein conserved in bacteria
HHJ40_RS08445	COG4715	Zinc finger, swim domain protein
HHJ40_RS08450	COG3552	Protein containing von Willebrand factor type A (VWA) domain
HHJ40_RS08455	COG2425	protein containing a von Willebrand factor type A (vWA) domain
HHJ40_RS08460	COG0714	Associated with various cellular activities
HHJ40_RS08470	COG3831	ATPase activity
HHJ40_RS08475	COG3831	ATPase activity
HHJ40_RS08485	COG0489	protein tyrosine kinase activity
HHJ40_RS08495	COG3539	Fimbrial protein
HHJ40_RS08500	COG3121	Chaperone
HHJ40_RS08505	COG3188	usher protein
HHJ40_RS08510	COG3539	Fimbrial protein
HHJ40_RS08515	COG5455	response to cobalt ion
HHJ40_RS08535	COG0351	phosphomethylpyrimidine kinase
HHJ40_RS08540	COG3757	hydrolase, family 25
HHJ40_RS08545	COG2188	Transcriptional regulator
HHJ40_RS08550	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
HHJ40_RS08555	COG1397	ADP-ribosylglycohydrolase
HHJ40_RS08560	COG2211	Major facilitator Superfamily
HHJ40_RS08565	COG1830	Aldolase
HHJ40_RS08580	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ40_RS08585	COG3414	Phosphotransferase system galactitol-specific IIB component
HHJ40_RS08590	COG3775	system Galactitol-specific IIC component
HHJ40_RS08595	COG1063	alcohol dehydrogenase
HHJ40_RS08625	COG3609	addiction module antidote protein, CC2985 family
HHJ40_RS08635	COG0745	RESPONSE REGULATOR receiver
HHJ40_RS08640	COG2205	protein histidine kinase activity
HHJ40_RS08680	COG4245	von Willebrand factor, type A
HHJ40_RS08685	COG0631	protein serine/threonine phosphatase activity
HHJ40_RS08690	COG4248	protein with protein kinase and helix-hairpin-helix DNA-binding domains
HHJ40_RS08695	COG0443	Heat shock 70 kDa protein
HHJ40_RS08700	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
HHJ40_RS08705	COG5002	protein histidine kinase activity
HHJ40_RS08705	COG5001	Diguanylate cyclase
HHJ40_RS08705	COG3447	MASE1 domain protein
HHJ40_RS08710	COG0572	uridine kinase
HHJ40_RS08720	COG2982	Protein involved in outer membrane biogenesis
HHJ40_RS08735	COG1596	polysaccharide export
HHJ40_RS08740	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
HHJ40_RS08745	COG0489	protein tyrosine kinase activity
HHJ40_RS08745	COG3206	protein involved in exopolysaccharide biosynthesis
HHJ40_RS08750	COG0463	Glycosyl transferase, family 2
HHJ40_RS08755	COG1045	serine acetyltransferase
HHJ40_RS08760	COG0438	transferase activity, transferring glycosyl groups
HHJ40_RS08770	COG1216	Glycosyl transferase, family 2
HHJ40_RS08775	COG0110	maltose O-acetyltransferase activity
HHJ40_RS08780	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
HHJ40_RS08785	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
HHJ40_RS08790	COG1051	belongs to the nudix hydrolase family
HHJ40_RS08795	COG0297	glycogen (starch) synthase activity
HHJ40_RS08800	COG0662	Cupin 2, conserved barrel domain protein
HHJ40_RS08800	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
HHJ40_RS08805	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
HHJ40_RS08810	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
HHJ40_RS08815	COG2244	polysaccharide biosynthetic process
HHJ40_RS08820	COG2327	Polysaccharide pyruvyl transferase
HHJ40_RS08825	COG0438	transferase activity, transferring glycosyl groups
HHJ40_RS08835	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
HHJ40_RS08840	COG1210	Utp--glucose-1-phosphate uridylyltransferase
HHJ40_RS08850	COG2089	acid synthase
HHJ40_RS08890	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
HHJ40_RS08895	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
HHJ40_RS08900	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
HHJ40_RS08905	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
HHJ40_RS08905	COG0140	phosphoribosyl-ATP diphosphatase activity
HHJ40_RS08920	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
HHJ40_RS08925	COG0131	Imidazoleglycerol-phosphate dehydratase
HHJ40_RS08925	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
HHJ40_RS08935	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
HHJ40_RS08950	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
HHJ40_RS08955	COG0583	DNA-binding transcription factor activity
HHJ40_RS08965	COG0531	amino acid
HHJ40_RS08970	COG2391	methyltransferase activity
HHJ40_RS08975	COG0425	Belongs to the sulfur carrier protein TusA family
HHJ40_RS08980	COG2925	Exonuclease
HHJ40_RS08985	COG1686	Belongs to the peptidase S11 family
HHJ40_RS08995	COG1289	transmembrane transporter activity
HHJ40_RS09005	COG4917	ethanolamine utilization protein
HHJ40_RS09010	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
HHJ40_RS09025	COG1376	ErfK ybiS ycfS ynhG family protein
HHJ40_RS09035	COG0583	DNA-binding transcription factor activity
HHJ40_RS09040	COG0583	DNA-binding transcription factor activity
HHJ40_RS09065	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
HHJ40_RS09070	COG0477	Major facilitator Superfamily
HHJ40_RS09100	COG3038	cytochrome b561
HHJ40_RS09105	COG3443	Belongs to the bacterial solute-binding protein 9 family
HHJ40_RS09120	COG2351	hydroxyisourate hydrolase activity
HHJ40_RS09125	COG0745	RESPONSE REGULATOR receiver
HHJ40_RS09130	COG2205	protein histidine kinase activity
HHJ40_RS09140	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
HHJ40_RS09150	COG1418	mRNA catabolic process
HHJ40_RS09155	COG0270	DNA (cytosine-5-)-methyltransferase activity
HHJ40_RS09160	COG3727	T/G mismatch-specific endonuclease activity
HHJ40_RS09165	COG0697	spore germination
HHJ40_RS09170	COG2354	Protein conserved in bacteria
HHJ40_RS09175	COG5475	Uncharacterized small protein (DUF2158)
HHJ40_RS09200	COG2197	response regulator
HHJ40_RS09205	COG1684	flagellar biosynthetic protein fliR
HHJ40_RS09210	COG1987	bacterial-type flagellum assembly
HHJ40_RS09215	COG1338	Plays a role in the flagellum-specific transport system
HHJ40_RS09220	COG3190	flagellar
HHJ40_RS09225	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
HHJ40_RS09230	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
HHJ40_RS09235	COG1580	Controls the rotational direction of flagella during chemotaxis
HHJ40_RS09240	COG3144	bacterial-type flagellum assembly
HHJ40_RS09245	COG2882	bacterial-type flagellum organization
HHJ40_RS09250	COG1157	protein secretion by the type III secretion system
HHJ40_RS09255	COG1317	bacterial-type flagellum organization
HHJ40_RS09260	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
HHJ40_RS09265	COG1766	The M ring may be actively involved in energy transduction
HHJ40_RS09275	COG2135	peptidase activity
HHJ40_RS09280	COG0425	Belongs to the sulfur carrier protein TusA family
HHJ40_RS09285	COG2391	methyltransferase activity
HHJ40_RS09295	COG0366	Alpha amylase catalytic
HHJ40_RS09305	COG1516	flagellar protein fliS
HHJ40_RS09320	COG1191	sigma factor activity
HHJ40_RS09350	COG2197	response regulator
HHJ40_RS09365	COG2197	response regulator
HHJ40_RS09395	COG3318	Belongs to the UPF0149 family
HHJ40_RS09395	COG3012	SEC-C Motif Domain Protein
HHJ40_RS09400	COG0814	amino acid
HHJ40_RS09410	COG1528	Iron-storage protein
HHJ40_RS09430	COG1528	Iron-storage protein
HHJ40_RS09435	COG1879	ABC-type sugar transport system periplasmic component
HHJ40_RS09440	COG1129	ABC transporter
HHJ40_RS09445	COG1172	Belongs to the binding-protein-dependent transport system permease family
HHJ40_RS09450	COG1877	trehalose-phosphatase activity
HHJ40_RS09460	COG0589	response to stress
HHJ40_RS09475	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
HHJ40_RS09480	COG1360	Flagellar Motor Protein
HHJ40_RS09485	COG2198	Histidine kinase
HHJ40_RS09485	COG0643	Histidine kinase
HHJ40_RS09490	COG0835	chemotaxis
HHJ40_RS09495	COG0840	transmembrane signaling receptor activity
HHJ40_RS09500	COG0840	transmembrane signaling receptor activity
HHJ40_RS09505	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
HHJ40_RS09510	COG2201	protein-glutamate methylesterase activity
HHJ40_RS09515	COG0745	RESPONSE REGULATOR receiver
HHJ40_RS09520	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
HHJ40_RS09525	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
HHJ40_RS09530	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
HHJ40_RS09540	COG3755	Protein conserved in bacteria
HHJ40_RS09550	COG3102	Protein conserved in bacteria
HHJ40_RS09560	COG3005	denitrification pathway
HHJ40_RS09565	COG0243	molybdopterin cofactor binding
HHJ40_RS09580	COG3788	relative of glutathione S-transferase, MAPEG superfamily
HHJ40_RS09585	COG1801	Protein of unknown function DUF72
HHJ40_RS09590	COG1335	isochorismatase
HHJ40_RS09600	COG0494	nUDIX hydrolase
HHJ40_RS09605	COG0217	transcriptional regulatory protein
HHJ40_RS09635	COG1108	ABC-type Mn2 Zn2 transport systems permease components
HHJ40_RS09645	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
HHJ40_RS09650	COG0739	heme binding
HHJ40_RS09655	COG1560	Kdo2-lipid A biosynthetic process
HHJ40_RS09660	COG0469	pyruvate kinase activity
HHJ40_RS09665	COG1737	Transcriptional regulator
HHJ40_RS09670	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
HHJ40_RS09675	COG0129	dihydroxy-acid dehydratase activity
HHJ40_RS09680	COG0800	Aldolase
HHJ40_RS09690	COG3141	response to X-ray
HHJ40_RS09700	COG2979	Protein of unknown function (DUF533)
HHJ40_RS09705	COG1770	oligopeptidase
HHJ40_RS09710	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
HHJ40_RS09715	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
HHJ40_RS09725	COG2372	response to copper ion
HHJ40_RS09730	COG1276	copper resistance
HHJ40_RS09740	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
HHJ40_RS09760	COG3008	intermembrane lipid transfer
HHJ40_RS09765	COG2995	paraquat-inducible protein a
HHJ40_RS09770	COG1956	GAF domain-containing protein
HHJ40_RS09780	COG0793	Belongs to the peptidase S41A family
HHJ40_RS09790	COG2814	Major facilitator Superfamily
HHJ40_RS09795	COG1414	Transcriptional regulator
HHJ40_RS09825	COG2226	methyltransferase
HHJ40_RS09840	COG3716	PTS system mannose fructose sorbose family IID component
HHJ40_RS09845	COG3715	PTS system
HHJ40_RS09850	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ40_RS09850	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
HHJ40_RS09855	COG1253	flavin adenine dinucleotide binding
HHJ40_RS09860	COG2200	EAL domain
HHJ40_RS09865	COG1760	l-serine dehydratase
HHJ40_RS09875	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
HHJ40_RS09890	COG0251	oxidation-reduction process
HHJ40_RS09895	COG1199	ATP-dependent helicase activity
HHJ40_RS09900	COG1214	PFAM Peptidase M22, glycoprotease
HHJ40_RS09905	COG3065	identical protein binding
HHJ40_RS09910	COG0318	PFAM AMP-dependent synthetase and ligase
HHJ40_RS09915	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
HHJ40_RS09920	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
HHJ40_RS09925	COG4638	Rieske (2fe-2S)
HHJ40_RS09930	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
HHJ40_RS09935	COG0473	3-isopropylmalate dehydrogenase activity
HHJ40_RS09940	COG0583	DNA-binding transcription factor activity
HHJ40_RS09950	COG3615	Tellurite resistance protein tehB
HHJ40_RS09965	COG0675	Transposase, IS605 OrfB family
HHJ40_RS09970	COG2261	transglycosylase associated protein
HHJ40_RS09985	COG2199	diguanylate cyclase activity
HHJ40_RS09985	COG2203	Gaf domain
HHJ40_RS09990	COG3042	response to heat
HHJ40_RS09995	COG3189	MarR family transcriptional regulator
HHJ40_RS10000	COG2807	transmembrane transport
HHJ40_RS10005	COG2207	Transcriptional regulator
HHJ40_RS10025	COG2199	diguanylate cyclase activity
HHJ40_RS10030	COG2199	diguanylate cyclase activity
HHJ40_RS10040	COG2766	serine protein kinase
HHJ40_RS10045	COG3713	MltA-interacting MipA family protein
HHJ40_RS10050	COG0656	L-ascorbic acid biosynthetic process
HHJ40_RS10055	COG0676	glucose-6-phosphate 1-epimerase activity
HHJ40_RS10060	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
HHJ40_RS10070	COG3139	Protein of unknown function (DUF1315)
HHJ40_RS10075	COG1063	alcohol dehydrogenase
HHJ40_RS10080	COG2271	Major facilitator Superfamily
HHJ40_RS10085	COG1063	alcohol dehydrogenase
HHJ40_RS10090	COG0191	fructose-bisphosphate aldolase activity
HHJ40_RS10095	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
HHJ40_RS10100	COG0667	Aldo Keto reductase
HHJ40_RS10105	COG1349	DNA-binding transcription factor activity
HHJ40_RS10110	COG2814	Major facilitator Superfamily
HHJ40_RS10115	COG1335	isochorismatase
HHJ40_RS10120	COG0252	asparaginase activity
HHJ40_RS10125	COG0616	signal peptide processing
HHJ40_RS10130	COG0778	Nitroreductase
HHJ40_RS10140	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
HHJ40_RS10150	COG3547	Transposase (IS116 IS110 IS902 family)
HHJ40_RS10155	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
HHJ40_RS10165	COG0494	nUDIX hydrolase
HHJ40_RS10170	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
HHJ40_RS10175	COG2897	thiosulfate sulfurtransferase activity
HHJ40_RS10180	COG4136	ATPase activity
HHJ40_RS10185	COG4135	transport system, permease component
HHJ40_RS10190	COG4134	Bacterial extracellular solute-binding protein
HHJ40_RS10195	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
HHJ40_RS10200	COG0398	Pfam SNARE associated Golgi protein
HHJ40_RS10210	COG0398	Pfam SNARE associated Golgi protein
HHJ40_RS10215	COG0708	Exodeoxyribonuclease III
HHJ40_RS10245	COG3678	ATP-independent chaperone mediated protein folding
HHJ40_RS10255	COG0322	excinuclease ABC activity
HHJ40_RS10265	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
HHJ40_RS10270	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
HHJ40_RS10275	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
HHJ40_RS10280	COG1447	Phosphotransferase system cellobiose-specific component IIA
HHJ40_RS10285	COG2169	Transcriptional regulator
HHJ40_RS10285	COG1917	Cupin 2, conserved barrel domain protein
HHJ40_RS10290	COG1486	melibiose metabolic process
HHJ40_RS10300	COG3547	Transposase (IS116 IS110 IS902 family)
HHJ40_RS10305	COG0753	catalase activity
HHJ40_RS10330	COG1988	membrane-bound metal-dependent
HHJ40_RS10335	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
HHJ40_RS10345	COG3001	Fructosamine kinase
HHJ40_RS10355	COG1105	Belongs to the carbohydrate kinase PfkB family
HHJ40_RS10360	COG3137	Salt-induced outer membrane protein
HHJ40_RS10420	COG0386	Belongs to the glutathione peroxidase family
HHJ40_RS10430	COG0791	NLP P60 protein
HHJ40_RS10435	COG2200	EAL domain
HHJ40_RS10445	COG4256	Hemin uptake protein
HHJ40_RS10450	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
HHJ40_RS10460	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
HHJ40_RS10460	COG0574	Belongs to the PEP-utilizing enzyme family
HHJ40_RS10465	COG0318	PFAM AMP-dependent synthetase and ligase
HHJ40_RS10470	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
HHJ40_RS10475	COG0644	oxidoreductase
HHJ40_RS10480	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
HHJ40_RS10485	COG2086	electron transfer activity
HHJ40_RS10490	COG1917	Cupin 2, conserved barrel domain protein
HHJ40_RS10490	COG2207	Transcriptional regulator
HHJ40_RS10495	COG1960	acyl-CoA dehydrogenase activity
HHJ40_RS10500	COG4670	ketone body catabolic process
HHJ40_RS10515	COG2271	Major facilitator Superfamily
HHJ40_RS10520	COG0738	Major facilitator superfamily
HHJ40_RS10535	COG0628	permease
HHJ40_RS10540	COG0247	lactate metabolic process
HHJ40_RS10540	COG0277	FAD linked oxidase domain protein
HHJ40_RS10545	COG2050	protein possibly involved in aromatic compounds catabolism
HHJ40_RS10555	COG0316	Belongs to the HesB IscA family
HHJ40_RS10560	COG0719	Fe-S assembly protein
HHJ40_RS10565	COG0396	ATPase activity
HHJ40_RS10570	COG0719	Fe-S assembly protein
HHJ40_RS10585	COG1376	ErfK ybiS ycfS ynhG family protein
HHJ40_RS10590	COG4238	major outer membrane lipoprotein
HHJ40_RS10595	COG0469	pyruvate kinase activity
HHJ40_RS10605	COG0437	4 iron, 4 sulfur cluster binding
HHJ40_RS10610	COG2414	aldehyde ferredoxin oxidoreductase
HHJ40_RS10620	COG0437	4 iron, 4 sulfur cluster binding
HHJ40_RS10625	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
HHJ40_RS10635	COG4529	Protein conserved in bacteria
HHJ40_RS10655	COG3468	outer membrane autotransporter barrel domain protein
HHJ40_RS10665	COG0307	riboflavin synthase, alpha
HHJ40_RS10670	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
HHJ40_RS10675	COG2814	Major facilitator Superfamily
HHJ40_RS10680	COG0583	DNA-binding transcription factor activity
HHJ40_RS10695	COG2814	Major facilitator Superfamily
HHJ40_RS10700	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
HHJ40_RS10705	COG0791	NLP P60 protein
HHJ40_RS10710	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
HHJ40_RS10715	COG1201	RNA secondary structure unwinding
HHJ40_RS10725	COG0346	lactoylglutathione lyase activity
HHJ40_RS10730	COG1902	pentaerythritol trinitrate reductase activity
HHJ40_RS10735	COG1309	transcriptional regulator
HHJ40_RS10740	COG3313	Fe-S protein
HHJ40_RS10745	COG4989	oxidoreductase activity
HHJ40_RS10750	COG2032	superoxide dismutase activity
HHJ40_RS10755	COG1289	transmembrane transporter activity
HHJ40_RS10760	COG1566	PFAM secretion protein HlyD family protein
HHJ40_RS10775	COG3133	Outer membrane lipoprotein
HHJ40_RS10785	COG3895	Periplasmic Protein
HHJ40_RS10800	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
HHJ40_RS10805	COG0625	glutathione transferase activity
HHJ40_RS10810	COG3104	oligopeptide transport
HHJ40_RS10815	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
HHJ40_RS10825	COG4659	FMN binding
HHJ40_RS10865	COG0673	inositol 2-dehydrogenase activity
HHJ40_RS10875	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
HHJ40_RS10880	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
HHJ40_RS10880	COG1263	PTS System
HHJ40_RS10885	COG1609	Transcriptional regulator
HHJ40_RS10890	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ40_RS10895	COG1309	transcriptional regulator
HHJ40_RS10900	COG3250	beta-galactosidase activity
HHJ40_RS10915	COG5339	Protein conserved in bacteria
HHJ40_RS10920	COG1482	cell wall glycoprotein biosynthetic process
HHJ40_RS10925	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
HHJ40_RS10925	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
HHJ40_RS10930	COG0114	fumarate hydratase activity
HHJ40_RS10940	COG2205	protein histidine kinase activity
HHJ40_RS10945	COG0745	RESPONSE REGULATOR receiver
HHJ40_RS10950	COG3136	membrane protein required for alginate biosynthesis
HHJ40_RS10960	COG0531	amino acid
HHJ40_RS10970	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
HHJ40_RS10975	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
HHJ40_RS10980	COG0628	permease
HHJ40_RS10995	COG3591	Belongs to the peptidase S1B family
HHJ40_RS11010	COG2814	Major facilitator Superfamily
HHJ40_RS11015	COG0583	DNA-binding transcription factor activity
HHJ40_RS11020	COG1940	carbohydrate kinase activity
HHJ40_RS11025	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
HHJ40_RS11035	COG3381	protein complex oligomerization
HHJ40_RS11040	COG3302	dmso reductase anchor subunit
HHJ40_RS11045	COG0437	4 iron, 4 sulfur cluster binding
HHJ40_RS11050	COG0243	molybdopterin cofactor binding
HHJ40_RS11055	COG0243	molybdopterin cofactor binding
HHJ40_RS11070	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
HHJ40_RS11085	COG4948	Mandelate Racemase Muconate Lactonizing
HHJ40_RS11090	COG1063	alcohol dehydrogenase
HHJ40_RS11100	COG0582	viral genome integration into host DNA
HHJ40_RS11110	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
HHJ40_RS11135	COG1396	sequence-specific DNA binding
HHJ40_RS11150	COG1846	Transcriptional regulator
HHJ40_RS11185	COG1403	HNH endonuclease
HHJ40_RS11190	COG0484	heat shock protein binding
HHJ40_RS11200	COG1278	Cold shock
HHJ40_RS11205	COG1278	Cold shock
HHJ40_RS11220	COG3772	lysozyme
HHJ40_RS11230	COG1278	Cold shock
HHJ40_RS11255	COG5562	phage envelope protein
HHJ40_RS11285	COG0740	serine-type endopeptidase activity
HHJ40_RS11360	COG5301	cellulose 1,4-beta-cellobiosidase activity
HHJ40_RS11365	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
HHJ40_RS11370	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
HHJ40_RS11385	COG0477	Major facilitator Superfamily
HHJ40_RS11390	COG0246	Mannitol dehydrogenase
HHJ40_RS11400	COG1802	Transcriptional regulator
HHJ40_RS11405	COG4221	oxidoreductase activity
HHJ40_RS11410	COG0339	signal peptide processing
HHJ40_RS11415	COG1546	Belongs to the CinA family
HHJ40_RS11420	COG3111	PFAM Bacterial OB fold (BOF) protein
HHJ40_RS11425	COG3706	GGDEF domain
HHJ40_RS11435	COG2814	Major facilitator Superfamily
HHJ40_RS11440	COG0697	spore germination
HHJ40_RS11445	COG2188	Transcriptional regulator
HHJ40_RS11455	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
HHJ40_RS11460	COG1447	Phosphotransferase system cellobiose-specific component IIA
HHJ40_RS11470	COG2723	6-phospho-beta-galactosidase activity
HHJ40_RS11480	COG4977	sequence-specific DNA binding
HHJ40_RS11485	COG1846	Transcriptional regulator
HHJ40_RS11505	COG0583	DNA-binding transcription factor activity
HHJ40_RS11510	COG1012	belongs to the aldehyde dehydrogenase family
HHJ40_RS11515	COG2066	Belongs to the glutaminase family
HHJ40_RS11525	COG2199	diguanylate cyclase activity
HHJ40_RS11535	COG3781	membrane
HHJ40_RS11585	COG2911	Protein conserved in bacteria
HHJ40_RS11585	COG3210	domain, Protein
HHJ40_RS11590	COG1396	sequence-specific DNA binding
HHJ40_RS11595	COG3550	peptidyl-serine autophosphorylation
HHJ40_RS11605	COG3539	Fimbrial protein
HHJ40_RS11615	COG3188	usher protein
HHJ40_RS11620	COG3539	Fimbrial protein
HHJ40_RS11625	COG3539	Fimbrial protein
HHJ40_RS11630	COG3539	Fimbrial protein
HHJ40_RS11635	COG0243	molybdopterin cofactor binding
HHJ40_RS11645	COG2207	Transcriptional regulator
HHJ40_RS11650	COG3119	arylsulfatase activity
HHJ40_RS11655	COG0641	radical SAM
HHJ40_RS11665	COG4178	(ABC) transporter
HHJ40_RS11670	COG4771	TonB-dependent receptor
HHJ40_RS11675	COG0612	Peptidase, M16
HHJ40_RS11685	COG0531	amino acid
HHJ40_RS11700	COG2199	diguanylate cyclase activity
HHJ40_RS11700	COG2200	EAL domain
HHJ40_RS11700	COG2202	Pas domain
HHJ40_RS11705	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
HHJ40_RS11710	COG0747	negative chemotaxis
HHJ40_RS11715	COG0601	transmembrane transport
HHJ40_RS11720	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
HHJ40_RS11725	COG0444	Belongs to the ABC transporter superfamily
HHJ40_RS11730	COG4608	Belongs to the ABC transporter superfamily
HHJ40_RS11735	COG1764	response to oxidative stress
HHJ40_RS11755	COG1064	alcohol dehydrogenase
HHJ40_RS11760	COG3093	addiction module antidote protein HigA
HHJ40_RS11765	COG2864	formate dehydrogenase
HHJ40_RS11770	COG0437	4 iron, 4 sulfur cluster binding
HHJ40_RS11780	COG0697	spore germination
HHJ40_RS11785	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
HHJ40_RS11790	COG4886	Leucine-rich repeat (LRR) protein
HHJ40_RS11795	COG2223	nitrite transmembrane transporter activity
HHJ40_RS11800	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
HHJ40_RS11805	COG1140	nitrate reductase beta subunit
HHJ40_RS11810	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
HHJ40_RS11815	COG2181	nitrate reductase activity
HHJ40_RS11820	COG0384	phenazine biosynthesis protein PhzF
HHJ40_RS11825	COG2162	N-hydroxyarylamine O-acetyltransferase activity
HHJ40_RS11830	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
HHJ40_RS11865	COG0625	glutathione transferase activity
HHJ40_RS11870	COG1113	amino acid transport
HHJ40_RS11875	COG3391	amine dehydrogenase activity
HHJ40_RS11880	COG4772	TonB-dependent receptor
HHJ40_RS11885	COG1802	Transcriptional regulator
HHJ40_RS11890	COG2130	NADP-dependent
HHJ40_RS11895	COG1247	-acetyltransferase
HHJ40_RS11900	COG3238	Protein conserved in bacteria
HHJ40_RS11930	COG1177	transmembrane transport
HHJ40_RS11935	COG1176	ABC-type spermidine putrescine transport system, permease component I
HHJ40_RS11940	COG3842	ATPase activity
HHJ40_RS11945	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
HHJ40_RS11950	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
HHJ40_RS11955	COG1598	PFAM Uncharacterised protein family UPF0150
HHJ40_RS11970	COG0826	peptidase U32
HHJ40_RS11975	COG1396	sequence-specific DNA binding
HHJ40_RS11980	COG3135	benzoate transporter
HHJ40_RS11985	COG0675	Transposase, IS605 OrfB family
HHJ40_RS12000	COG0500	methyltransferase
HHJ40_RS12005	COG1275	C4-dicarboxylate transporter malic acid transport protein
HHJ40_RS12010	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
HHJ40_RS12015	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
HHJ40_RS12020	COG2841	Protein conserved in bacteria
HHJ40_RS12030	COG5383	Protein conserved in bacteria
HHJ40_RS12035	COG0583	DNA-binding transcription factor activity
HHJ40_RS12040	COG0840	transmembrane signaling receptor activity
HHJ40_RS12055	COG3038	cytochrome b561
HHJ40_RS12060	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
HHJ40_RS12065	COG1012	belongs to the aldehyde dehydrogenase family
HHJ40_RS12070	COG1434	Gram-negative-bacterium-type cell wall biogenesis
HHJ40_RS12075	COG1643	Atp-dependent helicase
HHJ40_RS12085	COG2453	phosphatase
HHJ40_RS12085	COG0671	phosphoesterase, PA-phosphatase related
HHJ40_RS12090	COG2267	carboxylic ester hydrolase activity
HHJ40_RS12095	COG4589	Belongs to the CDS family
HHJ40_RS12100	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
HHJ40_RS12110	COG0667	Aldo Keto reductase
HHJ40_RS12115	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
HHJ40_RS12120	COG3327	negative regulation of DNA-templated transcription, initiation
HHJ40_RS12125	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
HHJ40_RS12130	COG0183	Belongs to the thiolase family
HHJ40_RS12135	COG2050	protein possibly involved in aromatic compounds catabolism
HHJ40_RS12140	COG1250	3-hydroxyacyl-CoA dehydrogenase
HHJ40_RS12145	COG1024	Enoyl-CoA hydratase
HHJ40_RS12150	COG1024	Enoyl-CoA hydratase
HHJ40_RS12155	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
HHJ40_RS12160	COG2151	metal-sulfur cluster biosynthetic enzyme
HHJ40_RS12165	COG3396	Phenylacetate-CoA oxygenase
HHJ40_RS12170	COG3460	Phenylacetate-CoA oxygenase
HHJ40_RS12175	COG3396	Phenylacetate-CoA oxygenase
HHJ40_RS12180	COG2030	dehydratase
HHJ40_RS12180	COG1012	belongs to the aldehyde dehydrogenase family
HHJ40_RS12185	COG3733	amine oxidase
HHJ40_RS12190	COG1012	belongs to the aldehyde dehydrogenase family
HHJ40_RS12195	COG2207	Transcriptional regulator
HHJ40_RS12200	COG3784	Protein of unknown function (DUF1318)
HHJ40_RS12210	COG2911	Protein conserved in bacteria
HHJ40_RS12215	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
HHJ40_RS12220	COG3187	Heat shock protein
HHJ40_RS12225	COG3042	response to heat
HHJ40_RS12230	COG1013	pyruvate-flavodoxin oxidoreductase activity
HHJ40_RS12230	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
HHJ40_RS12230	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
HHJ40_RS12230	COG0674	pyruvate-flavodoxin oxidoreductase activity
HHJ40_RS12235	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
HHJ40_RS12240	COG0589	response to stress
HHJ40_RS12250	COG0513	Belongs to the DEAD box helicase family
HHJ40_RS12260	COG3706	GGDEF domain
HHJ40_RS12265	COG2840	Smr protein MutS2
HHJ40_RS12270	COG0583	DNA-binding transcription factor activity
HHJ40_RS12275	COG1473	amidohydrolase
HHJ40_RS12280	COG1473	amidohydrolase
HHJ40_RS12285	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
HHJ40_RS12290	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
HHJ40_RS12295	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
HHJ40_RS12300	COG0589	response to stress
HHJ40_RS12305	COG3182	Iron-regulated membrane protein
HHJ40_RS12310	COG0668	transmembrane transport
HHJ40_RS12315	COG4166	transmembrane transport
HHJ40_RS12320	COG0583	DNA-binding transcription factor activity
HHJ40_RS12325	COG1073	alpha beta
HHJ40_RS12330	COG1073	alpha beta
HHJ40_RS12335	COG0702	epimerase
HHJ40_RS12340	COG2866	Carboxypeptidase
HHJ40_RS12345	COG4948	Mandelate Racemase Muconate Lactonizing
HHJ40_RS12350	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
HHJ40_RS12355	COG3283	Transcriptional regulator of aromatic amino acids metabolism
HHJ40_RS12365	COG3106	COG3106 Predicted ATPase
HHJ40_RS12370	COG1609	Transcriptional regulator
HHJ40_RS12380	COG3842	ATPase activity
HHJ40_RS12385	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
HHJ40_RS12390	COG1554	hydrolase, family 65, central catalytic
HHJ40_RS12395	COG0673	inositol 2-dehydrogenase activity
HHJ40_RS12400	COG1082	Xylose isomerase domain protein TIM barrel
HHJ40_RS12405	COG1063	alcohol dehydrogenase
HHJ40_RS12410	COG0395	ABC-type sugar transport system, permease component
HHJ40_RS12415	COG1175	transmembrane transport
HHJ40_RS12420	COG1653	transport
HHJ40_RS12425	COG0366	Alpha amylase catalytic
HHJ40_RS12430	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
HHJ40_RS12440	COG1983	PspC domain protein
HHJ40_RS12450	COG1842	Phage shock protein A
HHJ40_RS12455	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
HHJ40_RS12460	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
HHJ40_RS12465	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
HHJ40_RS12470	COG1012	belongs to the aldehyde dehydrogenase family
HHJ40_RS12475	COG1396	sequence-specific DNA binding
HHJ40_RS12475	COG1917	Cupin 2, conserved barrel domain protein
HHJ40_RS12480	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
HHJ40_RS12485	COG0174	glutamine synthetase
HHJ40_RS12495	COG0531	amino acid
HHJ40_RS12505	COG4166	transmembrane transport
HHJ40_RS12510	COG4168	peptide transport system, permease
HHJ40_RS12515	COG4171	peptide transport system, permease
HHJ40_RS12520	COG4172	Belongs to the ABC transporter superfamily
HHJ40_RS12525	COG4172	Belongs to the ABC transporter superfamily
HHJ40_RS12530	COG2852	Protein conserved in bacteria
HHJ40_RS12535	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
HHJ40_RS12540	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
HHJ40_RS12540	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
HHJ40_RS12555	COG5001	Diguanylate cyclase
HHJ40_RS12565	COG1349	DNA-binding transcription factor activity
HHJ40_RS12575	COG0023	Translation Initiation Factor
HHJ40_RS12585	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
HHJ40_RS12590	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
HHJ40_RS12595	COG0671	phosphoesterase, PA-phosphatase related
HHJ40_RS12625	COG0583	DNA-binding transcription factor activity
HHJ40_RS12630	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
HHJ40_RS12640	COG0616	signal peptide processing
HHJ40_RS12645	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ40_RS12650	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
HHJ40_RS12655	COG1187	pseudouridine synthase activity
HHJ40_RS12660	COG0009	L-threonylcarbamoyladenylate synthase
HHJ40_RS12665	COG0613	PHP domain protein
HHJ40_RS12675	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
HHJ40_RS12680	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
HHJ40_RS12680	COG0512	Glutamine amidotransferase of anthranilate synthase
HHJ40_RS12685	COG0135	phosphoribosylanthranilate isomerase activity
HHJ40_RS12685	COG0134	indole-3-glycerol-phosphate synthase activity
HHJ40_RS12700	COG3729	General stress protein
HHJ40_RS12705	COG3685	Protein conserved in bacteria
HHJ40_RS12710	COG3685	Protein conserved in bacteria
HHJ40_RS12715	COG3047	cAMP biosynthetic process
HHJ40_RS12735	COG1607	acyl-coa hydrolase
HHJ40_RS12745	COG2350	Protein conserved in bacteria
HHJ40_RS12750	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
HHJ40_RS12770	COG4608	Belongs to the ABC transporter superfamily
HHJ40_RS12775	COG0444	Belongs to the ABC transporter superfamily
HHJ40_RS12780	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
HHJ40_RS12785	COG0601	transmembrane transport
HHJ40_RS12790	COG4166	transmembrane transport
HHJ40_RS12800	COG2095	MarC family integral membrane protein
HHJ40_RS12805	COG1012	belongs to the aldehyde dehydrogenase family
HHJ40_RS12805	COG1454	alcohol dehydrogenase
HHJ40_RS12815	COG1435	thymidine kinase activity
HHJ40_RS12825	COG1210	Utp--glucose-1-phosphate uridylyltransferase
HHJ40_RS12830	COG0745	RESPONSE REGULATOR receiver
HHJ40_RS12835	COG1752	Esterase of the alpha-beta hydrolase superfamily
HHJ40_RS12845	COG0788	formyltetrahydrofolate deformylase activity
HHJ40_RS12870	COG2181	nitrate reductase activity
HHJ40_RS12875	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
HHJ40_RS12880	COG1140	nitrate reductase beta subunit
HHJ40_RS12885	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
HHJ40_RS12890	COG2223	nitrite transmembrane transporter activity
HHJ40_RS12895	COG3850	Histidine kinase
HHJ40_RS12900	COG2197	response regulator
HHJ40_RS12905	COG4932	domain protein
HHJ40_RS12910	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
HHJ40_RS12915	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
HHJ40_RS12920	COG4572	Cation transport regulator
HHJ40_RS12925	COG0387	Pfam Sodium calcium exchanger
HHJ40_RS12945	COG2912	Transglutaminase-like superfamily
HHJ40_RS12950	COG3094	Invasion gene expression up-regulator, SirB
HHJ40_RS12955	COG2890	protein-(glutamine-N5) methyltransferase activity
HHJ40_RS12980	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
HHJ40_RS12985	COG0659	secondary active sulfate transmembrane transporter activity
HHJ40_RS13000	COG0012	GTP binding
HHJ40_RS13005	COG3468	outer membrane autotransporter barrel domain protein
HHJ40_RS13010	COG3284	Transcriptional regulator
HHJ40_RS13015	COG2376	Dihydroxyacetone kinase
HHJ40_RS13020	COG1461	Dihydroxyacetone kinase
HHJ40_RS13025	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
HHJ40_RS13025	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ40_RS13025	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
HHJ40_RS13045	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
HHJ40_RS13055	COG1619	proteins homologs of microcin C7 resistance protein MccF
HHJ40_RS13065	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
HHJ40_RS13075	COG2719	SpoVR family
HHJ40_RS13095	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
HHJ40_RS13100	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
HHJ40_RS13115	COG0179	Fumarylacetoacetate (FAA) hydrolase
HHJ40_RS13140	COG2894	cell division
HHJ40_RS13195	COG2200	EAL domain
HHJ40_RS13220	COG2200	EAL domain
HHJ40_RS13225	COG0789	Transcriptional regulator
HHJ40_RS13230	COG5562	phage envelope protein
HHJ40_RS13245	COG0538	isocitrate dehydrogenase activity
HHJ40_RS13255	COG1401	restriction endodeoxyribonuclease activity
HHJ40_RS13265	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
HHJ40_RS13270	COG5301	cellulose 1,4-beta-cellobiosidase activity
HHJ40_RS13355	COG1030	water channel activity
HHJ40_RS13375	COG4220	transposase activity
HHJ40_RS13390	COG3772	lysozyme
HHJ40_RS13415	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
HHJ40_RS13450	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
HHJ40_RS13460	COG2076	Multidrug Resistance protein
HHJ40_RS13550	COG0582	viral genome integration into host DNA
HHJ40_RS13555	COG0538	isocitrate dehydrogenase activity
HHJ40_RS13560	COG1187	pseudouridine synthase activity
HHJ40_RS13580	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
HHJ40_RS13590	COG2205	protein histidine kinase activity
HHJ40_RS13595	COG2850	peptidyl-arginine hydroxylation
HHJ40_RS13605	COG3842	ATPase activity
HHJ40_RS13615	COG1177	transmembrane transport
HHJ40_RS13620	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
HHJ40_RS13630	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
HHJ40_RS13635	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
HHJ40_RS13645	COG4591	ABC-type transport system involved in lipoprotein release permease component
HHJ40_RS13650	COG1136	(ABC) transporter
HHJ40_RS13655	COG4591	ABC-type transport system involved in lipoprotein release permease component
HHJ40_RS13660	COG4763	Acyl-transferase
HHJ40_RS13665	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
HHJ40_RS13670	COG1376	ErfK ybiS ycfS ynhG family protein
HHJ40_RS13670	COG1388	LysM domain
HHJ40_RS13680	COG1309	transcriptional regulator
HHJ40_RS13685	COG3134	Outer membrane lipoprotein
HHJ40_RS13690	COG1252	NADH dehydrogenase
HHJ40_RS13710	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
HHJ40_RS13715	COG5633	Lipoprotein
HHJ40_RS13720	COG0537	adenosine 5'-monophosphoramidase activity
HHJ40_RS13725	COG4773	Receptor
HHJ40_RS13730	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
HHJ40_RS13730	COG1263	PTS System
HHJ40_RS13735	COG0084	hydrolase, TatD family'
HHJ40_RS13740	COG0470	DNA polymerase III
HHJ40_RS13750	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
HHJ40_RS13755	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
HHJ40_RS13760	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
HHJ40_RS13770	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ40_RS13775	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
HHJ40_RS13795	COG1399	metal-binding, possibly nucleic acid-binding protein
HHJ40_RS13800	COG0424	maF-like protein
HHJ40_RS13805	COG0564	pseudouridine synthase activity
HHJ40_RS13810	COG1530	ribonuclease E activity
HHJ40_RS13815	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
HHJ40_RS13820	COG1256	bacterial-type flagellum assembly
HHJ40_RS13825	COG3951	Flagellar rod assembly protein muramidase FlgJ
HHJ40_RS13825	COG1705	Flagellar rod assembly protein muramidase FlgJ
HHJ40_RS13840	COG4786	Flagellar basal body rod
HHJ40_RS13845	COG4787	bacterial-type flagellum-dependent cell motility
HHJ40_RS13850	COG1749	Flagellar hook protein flgE
HHJ40_RS13855	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
HHJ40_RS13860	COG1558	bacterial-type flagellum-dependent cell motility
HHJ40_RS13865	COG1815	bacterial-type flagellum-dependent cell motility
HHJ40_RS13870	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
HHJ40_RS13875	COG2747	anti-sigma28 factor FlgM
HHJ40_RS13880	COG3418	PFAM FlgN family protein
HHJ40_RS13885	COG0728	peptidoglycan biosynthetic process
HHJ40_RS13890	COG0673	inositol 2-dehydrogenase activity
HHJ40_RS13900	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
HHJ40_RS13910	COG2999	glutathione oxidoreductase activity
HHJ40_RS13945	COG3038	cytochrome b561
HHJ40_RS13950	COG2353	YceI-like domain
HHJ40_RS13960	COG1560	Kdo2-lipid A biosynthetic process
HHJ40_RS13975	COG5645	(Lipo)protein
HHJ40_RS13980	COG2943	transferase activity, transferring hexosyl groups
HHJ40_RS13995	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
HHJ40_RS14000	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
HHJ40_RS14025	COG2197	response regulator
HHJ40_RS14040	COG1462	curli production assembly transport component CsgG
HHJ40_RS14050	COG3381	protein complex oligomerization
HHJ40_RS14090	COG3706	GGDEF domain
HHJ40_RS14095	COG0457	Tetratricopeptide repeat
HHJ40_RS14100	COG0726	polysaccharide deacetylase
HHJ40_RS14100	COG1649	PFAM Uncharacterised BCR, COG1649
HHJ40_RS14105	COG1215	transferase activity, transferring glycosyl groups
HHJ40_RS14110	COG3658	cytochrome
HHJ40_RS14115	COG1702	phosphate starvation-inducible protein PhoH
HHJ40_RS14125	COG2822	iron ion transport
HHJ40_RS14140	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
HHJ40_RS14150	COG0506	proline dehydrogenase activity
HHJ40_RS14150	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
HHJ40_RS14150	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
HHJ40_RS14155	COG1309	transcriptional regulator
HHJ40_RS14190	COG2233	PERMEase
HHJ40_RS14195	COG3729	General stress protein
HHJ40_RS14235	COG0243	molybdopterin cofactor binding
HHJ40_RS14240	COG3005	denitrification pathway
HHJ40_RS14245	COG0745	RESPONSE REGULATOR receiver
HHJ40_RS14250	COG1879	ABC-type sugar transport system periplasmic component
HHJ40_RS14255	COG0784	Response regulator, receiver
HHJ40_RS14255	COG2205	protein histidine kinase activity
HHJ40_RS14255	COG2198	Histidine kinase
HHJ40_RS14260	COG0348	domain, Protein
HHJ40_RS14280	COG1278	Cold shock
HHJ40_RS14285	COG1278	Cold shock
HHJ40_RS14305	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
HHJ40_RS14310	COG1596	polysaccharide export
HHJ40_RS14315	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
HHJ40_RS14320	COG3206	protein involved in exopolysaccharide biosynthesis
HHJ40_RS14320	COG0489	protein tyrosine kinase activity
HHJ40_RS14335	COG1294	oxidase, subunit
HHJ40_RS14340	COG1271	oxidase subunit
HHJ40_RS14345	COG1773	rubredoxin
HHJ40_RS14350	COG1999	signal sequence binding
HHJ40_RS14355	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
HHJ40_RS14360	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
HHJ40_RS14365	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
HHJ40_RS14370	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
HHJ40_RS14380	COG0670	Belongs to the BI1 family
HHJ40_RS14385	COG2920	part of a sulfur-relay system
HHJ40_RS14390	COG1254	Belongs to the acylphosphatase family
HHJ40_RS14405	COG1832	CoA-binding protein
HHJ40_RS14420	COG0210	DNA helicase
HHJ40_RS14425	COG3304	Inner membrane component domain
HHJ40_RS14430	COG1289	transmembrane transporter activity
HHJ40_RS14435	COG3070	regulator of competence-specific genes
HHJ40_RS14445	COG2885	chlorophyll binding
HHJ40_RS14445	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
HHJ40_RS14455	COG1067	ATP-dependent peptidase activity
HHJ40_RS14465	COG3130	regulation of translation
HHJ40_RS14470	COG3009	Protein conserved in bacteria
HHJ40_RS14475	COG3008	intermembrane lipid transfer
HHJ40_RS14475	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
HHJ40_RS14480	COG2995	paraquat-inducible protein a
HHJ40_RS14485	COG0488	(ABC) transporter
HHJ40_RS14495	COG0633	Ferredoxin
HHJ40_RS14495	COG3217	Mosc domain protein beta barrel domain protein
HHJ40_RS14510	COG3121	Chaperone
HHJ40_RS14515	COG3539	Fimbrial protein
HHJ40_RS14520	COG3539	Fimbrial protein
HHJ40_RS14525	COG3539	Fimbrial protein
HHJ40_RS14530	COG3188	usher protein
HHJ40_RS14535	COG3121	Chaperone
HHJ40_RS14540	COG3539	Fimbrial protein
HHJ40_RS14545	COG0431	NADPH-dependent FMN reductase
HHJ40_RS14550	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
HHJ40_RS14560	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
HHJ40_RS14570	COG0308	aminopeptidase N
HHJ40_RS14585	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
HHJ40_RS14590	COG1448	Aminotransferase
HHJ40_RS14595	COG3547	Transposase (IS116 IS110 IS902 family)
HHJ40_RS14600	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
HHJ40_RS14605	COG3108	Peptidase M15
HHJ40_RS14610	COG2989	Protein conserved in bacteria
HHJ40_RS14620	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
HHJ40_RS14630	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
HHJ40_RS14635	COG1434	Gram-negative-bacterium-type cell wall biogenesis
HHJ40_RS14640	COG3173	Aminoglycoside phosphotransferase
HHJ40_RS14655	COG3214	Protein conserved in bacteria
HHJ40_RS14665	COG1132	(ABC) transporter
HHJ40_RS14670	COG2333	competence protein COMEC
HHJ40_RS14670	COG0658	competence protein
HHJ40_RS14680	COG0539	negative regulation of cytoplasmic translation
HHJ40_RS14690	COG0501	Belongs to the peptidase M48B family
HHJ40_RS14705	COG2323	membrane
HHJ40_RS14710	COG1944	ATP diphosphatase activity
HHJ40_RS14715	COG2116	formate transmembrane transporter activity
HHJ40_RS14720	COG1882	Formate acetyltransferase
HHJ40_RS14725	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
HHJ40_RS14730	COG2249	NAD(P)H dehydrogenase (quinone) activity
HHJ40_RS14735	COG0583	DNA-binding transcription factor activity
HHJ40_RS14740	COG0531	amino acid
HHJ40_RS14750	COG1335	isochorismatase
HHJ40_RS14755	COG3302	dmso reductase anchor subunit
HHJ40_RS14760	COG0437	4 iron, 4 sulfur cluster binding
HHJ40_RS14765	COG0243	molybdopterin cofactor binding
HHJ40_RS14775	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
HHJ40_RS14790	COG1522	sequence-specific DNA binding
HHJ40_RS14795	COG0492	ferredoxin-NADP+ reductase activity
HHJ40_RS14800	COG4988	ABC transporter
HHJ40_RS14805	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
HHJ40_RS14825	COG0542	response to heat
HHJ40_RS14835	COG1278	Cold shock
HHJ40_RS14840	COG0577	efflux transmembrane transporter activity
HHJ40_RS14840	COG1136	(ABC) transporter
HHJ40_RS14845	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
HHJ40_RS14850	COG2990	Protein conserved in bacteria
HHJ40_RS14855	COG3593	DNA synthesis involved in DNA repair
HHJ40_RS14860	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
HHJ40_RS14865	COG2431	L-lysine efflux transmembrane transporter activity
HHJ40_RS14875	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
HHJ40_RS14880	COG0028	Belongs to the TPP enzyme family
HHJ40_RS14885	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
HHJ40_RS14890	COG0702	epimerase
HHJ40_RS14895	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
HHJ40_RS14900	COG3023	N-Acetylmuramoyl-L-alanine amidase
HHJ40_RS14915	COG1126	abc transporter atp-binding protein
HHJ40_RS14920	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
HHJ40_RS14925	COG4215	(ABC) transporter
HHJ40_RS14930	COG4160	amino acid transport
HHJ40_RS14935	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
HHJ40_RS14950	COG1177	transmembrane transport
HHJ40_RS14955	COG1176	ABC-type spermidine putrescine transport system, permease component I
HHJ40_RS14960	COG3842	ATPase activity
HHJ40_RS14965	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
HHJ40_RS14980	COG0778	Nitroreductase
HHJ40_RS14990	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
HHJ40_RS15005	COG3226	Transcriptional regulator
HHJ40_RS15010	COG0738	Major facilitator superfamily
HHJ40_RS15015	COG0561	phosphatase activity
HHJ40_RS15025	COG2814	Major facilitator Superfamily
HHJ40_RS15030	COG0671	phosphoesterase, PA-phosphatase related
HHJ40_RS15035	COG1349	DNA-binding transcription factor activity
HHJ40_RS15040	COG1686	Belongs to the peptidase S11 family
HHJ40_RS15045	COG0625	glutathione transferase activity
HHJ40_RS15050	COG2133	pyrroloquinoline quinone binding
HHJ40_RS15065	COG2199	diguanylate cyclase activity
HHJ40_RS15070	COG2200	EAL domain
HHJ40_RS15095	COG1446	asparaginase
HHJ40_RS15100	COG0303	'Molybdopterin
HHJ40_RS15105	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
HHJ40_RS15110	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
HHJ40_RS15115	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
HHJ40_RS15120	COG1882	Formate acetyltransferase
HHJ40_RS15125	COG0561	phosphatase activity
HHJ40_RS15135	COG3547	Transposase (IS116 IS110 IS902 family)
HHJ40_RS15140	COG0488	(ABC) transporter
HHJ40_RS15145	COG1376	ErfK ybiS ycfS ynhG family protein
HHJ40_RS15150	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
HHJ40_RS15155	COG1321	iron dependent repressor
HHJ40_RS15165	COG2194	sulfuric ester hydrolase activity
HHJ40_RS15170	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
HHJ40_RS15180	COG5006	permease, DMT superfamily
HHJ40_RS15190	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
HHJ40_RS15195	COG0765	amino acid transport
HHJ40_RS15200	COG1126	abc transporter atp-binding protein
HHJ40_RS15205	COG0668	transmembrane transport
HHJ40_RS15220	COG4774	siderophore transport
HHJ40_RS15230	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
HHJ40_RS15240	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
HHJ40_RS15245	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
HHJ40_RS15250	COG1199	ATP-dependent helicase activity
HHJ40_RS15255	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
HHJ40_RS15260	COG0513	Belongs to the DEAD box helicase family
HHJ40_RS15265	COG1309	transcriptional regulator
HHJ40_RS15275	COG1131	(ABC) transporter
HHJ40_RS15280	COG0842	Transport permease protein
HHJ40_RS15285	COG0842	Transport permease protein
HHJ40_RS15295	COG3568	Endonuclease Exonuclease Phosphatase
HHJ40_RS15300	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
HHJ40_RS15305	COG0392	lysyltransferase activity
HHJ40_RS15310	COG0670	Belongs to the BI1 family
HHJ40_RS15320	COG0670	Belongs to the BI1 family
HHJ40_RS15325	COG0314	molybdopterin synthase activity
HHJ40_RS15330	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
HHJ40_RS15340	COG0521	Mo-molybdopterin cofactor biosynthetic process
HHJ40_RS15350	COG0391	Required for morphogenesis under gluconeogenic growth conditions
HHJ40_RS15360	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
HHJ40_RS15365	COG2226	methyltransferase
HHJ40_RS15380	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
HHJ40_RS15385	COG1881	PFAM PEBP family protein
HHJ40_RS15390	COG4677	pectinesterase activity
HHJ40_RS15395	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
HHJ40_RS15400	COG0471	metal ion transport
HHJ40_RS15405	COG2828	Protein conserved in bacteria
HHJ40_RS15410	COG0583	DNA-binding transcription factor activity
HHJ40_RS15420	COG0561	phosphatase activity
HHJ40_RS15430	COG4149	molybdate abc transporter
HHJ40_RS15435	COG0725	ABC transporter, periplasmic molybdate-binding protein
HHJ40_RS15445	COG2005	Transcriptional regulator
HHJ40_RS15445	COG3585	molybdate ion transport
HHJ40_RS15450	COG1119	ATPase activity
HHJ40_RS15455	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
HHJ40_RS15460	COG1085	galactose-1-phosphate uridylyltransferase
HHJ40_RS15470	COG2017	converts alpha-aldose to the beta-anomer
HHJ40_RS15480	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
HHJ40_RS15490	COG1230	cation diffusion facilitator family transporter
HHJ40_RS15495	COG3201	nicotinamide mononucleotide transporter
HHJ40_RS15545	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
HHJ40_RS15550	COG2885	chlorophyll binding
HHJ40_RS15560	COG3064	Membrane
HHJ40_RS15565	COG0848	biopolymer transport protein
HHJ40_RS15570	COG0811	peptide transport
HHJ40_RS15575	COG0824	Thioesterase
HHJ40_RS15580	COG3790	cyd operon protein YbgE
HHJ40_RS15585	COG4890	Cyd operon protein YbgT
HHJ40_RS15590	COG1294	oxidase, subunit
HHJ40_RS15595	COG1271	oxidase subunit
HHJ40_RS15600	COG0383	alpha-mannosidase activity
HHJ40_RS15605	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
HHJ40_RS15605	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
HHJ40_RS15605	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ40_RS15610	COG2188	Transcriptional regulator
HHJ40_RS15615	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
HHJ40_RS15625	COG0508	dehydrogenase complex catalyzes the overall conversion of
HHJ40_RS15630	COG0567	Dehydrogenase, E1 component
HHJ40_RS15635	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
HHJ40_RS15640	COG1053	succinate dehydrogenase
HHJ40_RS15645	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
HHJ40_RS15650	COG2009	succinate dehydrogenase
HHJ40_RS15660	COG0372	Belongs to the citrate synthase family
HHJ40_RS15665	COG3539	Fimbrial protein
HHJ40_RS15670	COG3188	usher protein
HHJ40_RS15675	COG3121	Chaperone
HHJ40_RS15680	COG3539	Fimbrial protein
HHJ40_RS15685	COG3180	Ammonia monooxygenase
HHJ40_RS15700	COG1984	allophanate hydrolase subunit 2
HHJ40_RS15705	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
HHJ40_RS15710	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
HHJ40_RS15720	COG0415	Belongs to the DNA photolyase family
HHJ40_RS15725	COG3272	Protein of unknown function (DUF1722)
HHJ40_RS15820	COG2205	protein histidine kinase activity
HHJ40_RS15825	COG0745	RESPONSE REGULATOR receiver
HHJ40_RS15835	COG1982	Orn Lys Arg decarboxylase major
HHJ40_RS15840	COG0531	amino acid
HHJ40_RS15845	COG0033	Phosphoglucomutase
HHJ40_RS15850	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
HHJ40_RS15855	COG0596	Alpha beta hydrolase
HHJ40_RS15865	COG0716	FMN binding
HHJ40_RS15875	COG0735	belongs to the Fur family
HHJ40_RS15895	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
HHJ40_RS15895	COG1263	PTS System
HHJ40_RS15895	COG2190	(PTS) system
HHJ40_RS15905	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
HHJ40_RS15910	COG1846	Transcriptional regulator
HHJ40_RS15910	COG1940	carbohydrate kinase activity
HHJ40_RS15915	COG0647	UMP catabolic process
HHJ40_RS15920	COG0367	asparagine synthase
HHJ40_RS15960	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
HHJ40_RS15970	COG1702	phosphate starvation-inducible protein PhoH
HHJ40_RS15980	COG4535	Mg2 and Co2 transporter CorC
HHJ40_RS15985	COG0815	Transfers the fatty acyl group on membrane lipoproteins
HHJ40_RS15995	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
HHJ40_RS16000	COG0765	amino acid transport
HHJ40_RS16005	COG0765	amino acid transport
HHJ40_RS16010	COG1126	abc transporter atp-binding protein
HHJ40_RS16020	COG0443	Heat shock 70 kDa protein
HHJ40_RS16025	COG2214	Heat shock protein DnaJ domain protein
HHJ40_RS16035	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
HHJ40_RS16040	COG2214	Heat shock protein DnaJ domain protein
HHJ40_RS16050	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
HHJ40_RS16055	COG2888	peptidyl-tyrosine sulfation
HHJ40_RS16070	COG1466	dna polymerase III delta subunit
HHJ40_RS16080	COG0406	alpha-ribazole phosphatase activity
HHJ40_RS16085	COG0799	negative regulation of ribosome biogenesis
HHJ40_RS16095	COG0768	penicillin binding
HHJ40_RS16100	COG0772	Belongs to the SEDS family
HHJ40_RS16105	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
HHJ40_RS16110	COG1686	Belongs to the peptidase S11 family
HHJ40_RS16125	COG0583	DNA-binding transcription factor activity
HHJ40_RS16135	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
HHJ40_RS16140	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
HHJ40_RS16160	COG3069	C4-dicarboxylate transmembrane transporter activity
HHJ40_RS16165	COG4565	transcriptional regulatory protein
HHJ40_RS16170	COG3290	protein histidine kinase activity
HHJ40_RS16175	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
HHJ40_RS16185	COG2301	Belongs to the HpcH HpaI aldolase family
HHJ40_RS16190	COG3051	citrate lyase alpha subunit
HHJ40_RS16205	COG0471	metal ion transport
HHJ40_RS16210	COG3719	Belongs to the RNase T2 family
HHJ40_RS16215	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
HHJ40_RS16220	COG1063	alcohol dehydrogenase
HHJ40_RS16225	COG0589	response to stress
HHJ40_RS16230	COG3634	alkyl hydroperoxide reductase activity
HHJ40_RS16235	COG0450	alkyl hydroperoxide reductase
HHJ40_RS16240	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
HHJ40_RS16245	COG0583	DNA-binding transcription factor activity
HHJ40_RS16250	COG3969	phosphoadenosine phosphosulfate
HHJ40_RS16255	COG1475	DNA binding
HHJ40_RS16260	COG0436	Aminotransferase
HHJ40_RS16265	COG0371	Dehydrogenase
HHJ40_RS16270	COG2879	small protein
HHJ40_RS16275	COG1966	Carbon starvation protein
HHJ40_RS16280	COG2050	protein possibly involved in aromatic compounds catabolism
HHJ40_RS16285	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ40_RS16290	COG1535	isochorismatase
HHJ40_RS16290	COG3433	isochorismatase activity
HHJ40_RS16295	COG1021	2,3-dihydroxybenzoate-AMP ligase
HHJ40_RS16300	COG1169	isochorismate synthase
HHJ40_RS16305	COG4592	Periplasmic binding protein
HHJ40_RS16315	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
HHJ40_RS16320	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
HHJ40_RS16325	COG1120	ATPase activity
HHJ40_RS16330	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
HHJ40_RS16335	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
HHJ40_RS16335	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
HHJ40_RS16340	COG3251	PFAM MbtH domain protein
HHJ40_RS16345	COG2382	esterase
HHJ40_RS16350	COG4771	TonB-dependent receptor
HHJ40_RS16355	COG2977	Belongs to the P-Pant transferase superfamily
HHJ40_RS16380	COG2315	Protein conserved in bacteria
HHJ40_RS16385	COG0778	Nitroreductase
HHJ40_RS16390	COG0668	transmembrane transport
HHJ40_RS16395	COG1113	amino acid transport
HHJ40_RS16400	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
HHJ40_RS16405	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
HHJ40_RS16410	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
HHJ40_RS16415	COG1538	Outer membrane efflux protein
HHJ40_RS16420	COG0745	RESPONSE REGULATOR receiver
HHJ40_RS16425	COG5002	protein histidine kinase activity
HHJ40_RS16430	COG3501	Rhs element vgr protein
HHJ40_RS16440	COG3209	COG3209 Rhs family protein
HHJ40_RS16440	COG4104	PAAR repeat-containing protein
HHJ40_RS16450	COG5433	transposase activity
HHJ40_RS16455	COG1215	transferase activity, transferring glycosyl groups
HHJ40_RS16460	COG4783	chaperone-mediated protein folding
HHJ40_RS16470	COG2207	Transcriptional regulator
HHJ40_RS16480	COG2197	response regulator
HHJ40_RS16485	COG3539	Fimbrial protein
HHJ40_RS16490	COG3539	Fimbrial protein
HHJ40_RS16495	COG3188	usher protein
HHJ40_RS16500	COG3121	Chaperone
HHJ40_RS16505	COG3539	Fimbrial protein
HHJ40_RS16515	COG2501	S4 domain
HHJ40_RS16520	COG1988	membrane-bound metal-dependent
HHJ40_RS16530	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
HHJ40_RS16540	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
HHJ40_RS16545	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
HHJ40_RS16550	COG0549	Belongs to the carbamate kinase family
HHJ40_RS16560	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
HHJ40_RS16565	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
HHJ40_RS16570	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
HHJ40_RS16575	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
HHJ40_RS16580	COG3257	ureidoglycine aminohydrolase activity
HHJ40_RS16585	COG1929	Belongs to the glycerate kinase type-1 family
HHJ40_RS16590	COG2233	PERMEase
HHJ40_RS16600	COG1953	Uracil, thiamine, allantoin
HHJ40_RS16605	COG2084	Dehydrogenase
HHJ40_RS16610	COG3622	Belongs to the hyi family
HHJ40_RS16615	COG3960	tartronate-semialdehyde synthase activity
HHJ40_RS16620	COG1414	Transcriptional regulator
HHJ40_RS16630	COG0583	DNA-binding transcription factor activity
HHJ40_RS16665	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
HHJ40_RS16670	COG4181	ATPase activity
HHJ40_RS16675	COG2755	lipolytic protein G-D-S-L family
HHJ40_RS16680	COG0300	oxidoreductase activity
HHJ40_RS16690	COG0390	transport system, permease component
HHJ40_RS16695	COG4619	ABC transporter
HHJ40_RS16700	COG0330	HflC and HflK could
HHJ40_RS16705	COG1585	Membrane protein implicated in regulation of membrane protease activity
HHJ40_RS16710	COG0789	Transcriptional regulator
HHJ40_RS16715	COG0531	amino acid
HHJ40_RS16720	COG2066	Belongs to the glutaminase family
HHJ40_RS16725	COG2217	Heavy metal translocating P-type atpase
HHJ40_RS16730	COG3093	addiction module antidote protein HigA
HHJ40_RS16735	COG3735	TraB family
HHJ40_RS16740	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
HHJ40_RS16745	COG0737	Belongs to the 5'-nucleotidase family
HHJ40_RS16750	COG2223	nitrite transmembrane transporter activity
HHJ40_RS16755	COG4651	solute:proton antiporter activity
HHJ40_RS16755	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
HHJ40_RS16760	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
HHJ40_RS16795	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
HHJ40_RS16805	COG2832	Protein of unknown function (DUF454)
HHJ40_RS16810	COG3923	Primosomal replication protein n
HHJ40_RS16820	COG3547	Transposase (IS116 IS110 IS902 family)
HHJ40_RS16825	COG1196	nuclear chromosome segregation
HHJ40_RS16825	COG3264	Mechanosensitive ion channel
HHJ40_RS16830	COG1309	transcriptional regulator
HHJ40_RS16835	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
HHJ40_RS16840	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
HHJ40_RS16855	COG0110	maltose O-acetyltransferase activity
HHJ40_RS16865	COG4943	cyclic-guanylate-specific phosphodiesterase activity
HHJ40_RS16870	COG5507	3-demethylubiquinone-9 3-methyltransferase
HHJ40_RS16880	COG3695	enzyme binding
HHJ40_RS16885	COG3126	Type III secretion system lipoprotein chaperone (YscW)
HHJ40_RS16890	COG1946	Acyl-CoA thioesterase
HHJ40_RS16895	COG0004	ammonium transporteR
HHJ40_RS16900	COG0347	Belongs to the P(II) protein family
HHJ40_RS16905	COG1132	(ABC) transporter
HHJ40_RS16910	COG1132	(ABC) transporter
HHJ40_RS16915	COG1522	sequence-specific DNA binding
HHJ40_RS16925	COG4533	DNA binding
HHJ40_RS16935	COG0824	Thioesterase
HHJ40_RS16940	COG1555	photosystem II stabilization
HHJ40_RS16945	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
HHJ40_RS16950	COG0776	regulation of translation
HHJ40_RS16955	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
HHJ40_RS16975	COG0271	Belongs to the BolA IbaG family
HHJ40_RS16980	COG3056	Lipoprotein
HHJ40_RS16985	COG2223	nitrite transmembrane transporter activity
HHJ40_RS16990	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
HHJ40_RS16995	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
HHJ40_RS17000	COG1845	cytochrome c oxidase, subunit III
HHJ40_RS17005	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
HHJ40_RS17030	COG2814	Major facilitator Superfamily
HHJ40_RS17040	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
HHJ40_RS17045	COG0693	protein deglycase activity
HHJ40_RS17060	COG0142	geranyltranstransferase activity
HHJ40_RS17070	COG0667	Aldo Keto reductase
HHJ40_RS17075	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
HHJ40_RS17080	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
HHJ40_RS17095	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
HHJ40_RS17095	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
HHJ40_RS17105	COG4238	major outer membrane lipoprotein
HHJ40_RS17110	COG3248	Nucleoside-binding outer membrane protein
HHJ40_RS17115	COG1403	HNH endonuclease
HHJ40_RS17120	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
HHJ40_RS17125	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
HHJ40_RS17130	COG1862	Preprotein translocase
HHJ40_RS17150	COG0366	Alpha amylase catalytic
HHJ40_RS17155	COG1113	amino acid transport
HHJ40_RS17160	COG1114	Component of the transport system for branched-chain amino acids
HHJ40_RS17165	COG5002	protein histidine kinase activity
HHJ40_RS17170	COG0745	RESPONSE REGULATOR receiver
HHJ40_RS17175	COG0420	3'-5' exonuclease activity
HHJ40_RS17180	COG0419	ATPase involved in DNA repair
HHJ40_RS17185	COG2814	Major facilitator Superfamily
HHJ40_RS17190	COG1940	carbohydrate kinase activity
HHJ40_RS17215	COG4126	flavin adenine dinucleotide binding
HHJ40_RS17235	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
HHJ40_RS17240	COG3706	GGDEF domain
HHJ40_RS17250	COG1785	Belongs to the alkaline phosphatase family
HHJ40_RS17265	COG1181	Belongs to the D-alanine--D-alanine ligase family
HHJ40_RS17285	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
HHJ40_RS17290	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
HHJ40_RS17295	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
HHJ40_RS17300	COG3468	outer membrane autotransporter barrel domain protein
HHJ40_RS17305	COG0113	porphobilinogen synthase activity
HHJ40_RS17310	COG2175	clavaminate synthase activity
HHJ40_RS17315	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
HHJ40_RS17325	COG4521	taurine ABC transporter
HHJ40_RS17330	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
HHJ40_RS17335	COG1215	transferase activity, transferring glycosyl groups
HHJ40_RS17365	COG3122	Protein conserved in bacteria
HHJ40_RS17405	COG1414	Transcriptional regulator
HHJ40_RS17410	COG1609	Transcriptional regulator
HHJ40_RS17420	COG2223	nitrite transmembrane transporter activity
HHJ40_RS17425	COG0110	maltose O-acetyltransferase activity
HHJ40_RS17430	COG2807	transmembrane transport
HHJ40_RS17440	COG0288	reversible hydration of carbon dioxide
HHJ40_RS17445	COG0583	DNA-binding transcription factor activity
HHJ40_RS17450	COG0402	S-adenosylhomocysteine deaminase activity
HHJ40_RS17455	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
HHJ40_RS17460	COG3547	Transposase (IS116 IS110 IS902 family)
HHJ40_RS17465	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
HHJ40_RS17470	COG2079	MmgE PrpD family protein
HHJ40_RS17475	COG0372	Belongs to the citrate synthase family
HHJ40_RS17480	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
HHJ40_RS17485	COG3829	transcription factor binding
HHJ40_RS17495	COG1280	lysine exporter protein (LysE YggA)
HHJ40_RS17510	COG1064	alcohol dehydrogenase
HHJ40_RS17520	COG1172	Belongs to the binding-protein-dependent transport system permease family
HHJ40_RS17525	COG1129	ABC transporter
HHJ40_RS17530	COG1879	ABC-type sugar transport system periplasmic component
HHJ40_RS17540	COG0402	S-adenosylhomocysteine deaminase activity
HHJ40_RS17545	COG0549	Belongs to the carbamate kinase family
HHJ40_RS17550	COG1304	FMN binding
HHJ40_RS17555	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
HHJ40_RS17565	COG0666	response to abiotic stimulus
HHJ40_RS17575	COG0583	DNA-binding transcription factor activity
HHJ40_RS17580	COG2200	EAL domain
HHJ40_RS17580	COG2771	luxR family
HHJ40_RS17590	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
HHJ40_RS17615	COG1556	Lactate utilization protein
HHJ40_RS17620	COG1139	Iron-sulfur cluster binding protein
HHJ40_RS17625	COG0247	lactate metabolic process
HHJ40_RS17630	COG2207	Transcriptional regulator
HHJ40_RS17635	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
HHJ40_RS17645	COG3059	membrane
HHJ40_RS17655	COG2207	Transcriptional regulator
HHJ40_RS17655	COG3708	Transcriptional regulator
HHJ40_RS17660	COG1388	LysM domain
HHJ40_RS17700	COG3188	usher protein
HHJ40_RS17710	COG3121	Chaperone
HHJ40_RS17715	COG0727	PFAM Uncharacterised protein family (UPF0153)
HHJ40_RS17720	COG3477	response to acidic pH
HHJ40_RS17725	COG2080	2 iron, 2 sulfur cluster binding
HHJ40_RS17730	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
HHJ40_RS17735	COG1529	Aldehyde oxidase and xanthine dehydrogenase
HHJ40_RS17740	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
HHJ40_RS17745	COG0583	DNA-binding transcription factor activity
HHJ40_RS17765	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
HHJ40_RS17785	COG2195	Cleaves the N-terminal amino acid of tripeptides
HHJ40_RS17790	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
HHJ40_RS17795	COG1690	Belongs to the RtcB family
HHJ40_RS17800	COG0454	-acetyltransferase
HHJ40_RS17830	COG0791	NLP P60 protein
HHJ40_RS17835	COG3077	Addiction module antitoxin, RelB DinJ family
HHJ40_RS17840	COG3041	Addiction module toxin RelE StbE family
HHJ40_RS17845	COG3034	peptidoglycan biosynthetic process
HHJ40_RS17850	COG0121	glutamine amidotransferase
HHJ40_RS17860	COG1960	acyl-CoA dehydrogenase activity
HHJ40_RS17870	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
HHJ40_RS17925	COG3501	Rhs element vgr protein
HHJ40_RS18015	COG3157	Type VI secretion system effector, Hcp
HHJ40_RS18020	COG4104	PAAR repeat-containing protein
HHJ40_RS18040	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
HHJ40_RS18050	COG2226	methyltransferase
HHJ40_RS18060	COG0741	lytic transglycosylase activity
HHJ40_RS18060	COG1388	LysM domain
HHJ40_RS18065	COG2226	methyltransferase
HHJ40_RS18075	COG0583	DNA-binding transcription factor activity
HHJ40_RS18080	COG0656	L-ascorbic acid biosynthetic process
HHJ40_RS18115	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
HHJ40_RS18120	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
HHJ40_RS18125	COG2011	ABC-type metal ion transport system permease component
HHJ40_RS18130	COG1464	Belongs to the NlpA lipoprotein family
HHJ40_RS18140	COG1720	tRNA m6t6A37 methyltransferase activity
HHJ40_RS18150	COG0791	NLP P60 protein
HHJ40_RS18155	COG3547	Transposase (IS116 IS110 IS902 family)
HHJ40_RS18160	COG3015	lipoprotein NlpE involved in copper resistance
HHJ40_RS18165	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
HHJ40_RS18170	COG4681	YaeQ
HHJ40_RS18180	COG4568	rho-dependent transcription termination
HHJ40_RS18190	COG0346	lactoylglutathione lyase activity
HHJ40_RS18205	COG0587	DNA-directed DNA polymerase activity
HHJ40_RS18230	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
HHJ40_RS18235	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
HHJ40_RS18245	COG0750	zinc metalloprotease
HHJ40_RS18250	COG0575	Belongs to the CDS family
HHJ40_RS18255	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
HHJ40_RS18260	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
HHJ40_RS18285	COG0024	Methionine aminopeptidase
HHJ40_RS18305	COG3835	regulator
HHJ40_RS18310	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
HHJ40_RS18325	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
HHJ40_RS18330	COG2860	membrane
HHJ40_RS18355	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
HHJ40_RS18360	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
HHJ40_RS18365	COG1120	ATPase activity
HHJ40_RS18370	COG4774	siderophore transport
HHJ40_RS18375	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
HHJ40_RS18380	COG1643	Atp-dependent helicase
HHJ40_RS18385	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
HHJ40_RS18395	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
HHJ40_RS18405	COG0617	tRNA 3'-terminal CCA addition
HHJ40_RS18410	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
HHJ40_RS18415	COG3539	Fimbrial protein
HHJ40_RS18420	COG3121	Chaperone
HHJ40_RS18425	COG3188	usher protein
HHJ40_RS18430	COG3539	Fimbrial protein
HHJ40_RS18435	COG3539	Fimbrial protein
HHJ40_RS18440	COG3539	Fimbrial protein
HHJ40_RS18445	COG3539	Fimbrial protein
HHJ40_RS18460	COG5464	transposase or invertase
HHJ40_RS18470	COG0726	polysaccharide deacetylase
HHJ40_RS18475	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ40_RS18480	COG0842	Transport permease protein
HHJ40_RS18485	COG1131	(ABC) transporter
HHJ40_RS18490	COG0288	reversible hydration of carbon dioxide
HHJ40_RS18495	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
HHJ40_RS18500	COG4993	Dehydrogenase
HHJ40_RS18510	COG0251	oxidation-reduction process
HHJ40_RS18530	COG0251	oxidation-reduction process
HHJ40_RS18535	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ40_RS18540	COG1309	transcriptional regulator
HHJ40_RS18545	COG2731	YhcH YjgK YiaL family protein
HHJ40_RS18560	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
HHJ40_RS18565	COG0456	acetyltransferase
HHJ40_RS18570	COG4269	membrane
HHJ40_RS18575	COG0525	valine-tRNA ligase activity
HHJ40_RS18580	COG2927	DNA polymerase III (CHI subunit)
HHJ40_RS18590	COG0795	lipopolysaccharide-transporting ATPase activity
HHJ40_RS18595	COG0795	lipopolysaccharide-transporting ATPase activity
HHJ40_RS18600	COG0433	COG0433 Predicted ATPase
HHJ40_RS18605	COG1064	alcohol dehydrogenase
HHJ40_RS18645	COG3055	Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
HHJ40_RS18650	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
HHJ40_RS18665	COG3539	Fimbrial protein
HHJ40_RS18670	COG3539	Fimbrial protein
HHJ40_RS18675	COG3121	Chaperone
HHJ40_RS18680	COG3188	usher protein
HHJ40_RS18685	COG3539	Fimbrial protein
HHJ40_RS18690	COG3539	Fimbrial protein
HHJ40_RS18695	COG3539	Fimbrial protein
HHJ40_RS18700	COG2610	gluconate transmembrane transporter activity
HHJ40_RS18710	COG0246	Mannitol dehydrogenase
HHJ40_RS18715	COG2186	Transcriptional regulator
HHJ40_RS18735	COG0583	DNA-binding transcription factor activity
HHJ40_RS18740	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
HHJ40_RS18745	COG0700	Nucleoside recognition
HHJ40_RS18750	COG3366	ferrous iron transmembrane transporter activity
HHJ40_RS18760	COG0477	Major facilitator Superfamily
HHJ40_RS18775	COG1924	4 iron, 4 sulfur cluster binding
HHJ40_RS18780	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
HHJ40_RS18785	COG2733	membrane
HHJ40_RS18790	COG2814	Major facilitator Superfamily
HHJ40_RS18805	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
HHJ40_RS18810	COG5457	Domain of unknown function (DUF1127)
HHJ40_RS18820	COG0523	cobalamin synthesis protein
HHJ40_RS18825	COG2879	small protein
HHJ40_RS18830	COG1966	Carbon starvation protein
HHJ40_RS18835	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
HHJ40_RS18840	COG2368	4-hydroxyphenylacetate
HHJ40_RS18860	COG3971	2-oxopent-4-enoate hydratase activity
HHJ40_RS18870	COG3384	dioxygenase
HHJ40_RS18875	COG1012	belongs to the aldehyde dehydrogenase family
HHJ40_RS18880	COG0179	Fumarylacetoacetate (FAA) hydrolase
HHJ40_RS18885	COG1846	Transcriptional regulator
HHJ40_RS18890	COG0840	transmembrane signaling receptor activity
HHJ40_RS18895	COG2271	Major facilitator Superfamily
HHJ40_RS18900	COG1802	Transcriptional regulator
HHJ40_RS18905	COG1063	alcohol dehydrogenase
HHJ40_RS18920	COG1484	DNA-dependent DNA replication
HHJ40_RS18935	COG2966	Psort location CytoplasmicMembrane, score
HHJ40_RS18940	COG2197	response regulator
HHJ40_RS18945	COG2197	response regulator
HHJ40_RS18950	COG4114	ferric iron reductase
HHJ40_RS18980	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
HHJ40_RS18985	COG0456	acetyltransferase
HHJ40_RS18990	COG1011	Hydrolase
HHJ40_RS19000	COG2823	Periplasmic or secreted lipoprotein
HHJ40_RS19010	COG4667	esterase of the alpha-beta hydrolase superfamily
HHJ40_RS19015	COG0084	hydrolase, TatD family'
HHJ40_RS19020	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
HHJ40_RS19025	COG1328	CTP reductase activity
HHJ40_RS19060	COG3726	membrane protein affecting hemolysin expression
HHJ40_RS19065	COG0560	Phosphoserine phosphatase
HHJ40_RS19070	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
HHJ40_RS19075	COG1056	cytidyltransferase-related domain
HHJ40_RS19075	COG3172	ATPase kinase involved in NAD metabolism
HHJ40_RS19080	COG0488	(ABC) transporter
HHJ40_RS19085	COG0741	lytic transglycosylase activity
HHJ40_RS19105	COG2207	Transcriptional regulator
HHJ40_RS19105	COG3708	Transcriptional regulator
HHJ40_RS19110	COG3045	CreA protein
HHJ40_RS19115	COG0745	RESPONSE REGULATOR receiver
HHJ40_RS19120	COG2205	protein histidine kinase activity
HHJ40_RS19125	COG4452	Inner membrane protein CreD
HHJ40_RS19130	COG0745	RESPONSE REGULATOR receiver
HHJ40_RS19140	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
HHJ40_RS19150	COG0527	aspartate kinase activity
HHJ40_RS19150	COG0460	homoserine dehydrogenase
HHJ40_RS19160	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
HHJ40_RS19170	COG3547	Transposase (IS116 IS110 IS902 family)
HHJ40_RS19180	COG1115	amino acid carrier protein
HHJ40_RS19190	COG0521	Mo-molybdopterin cofactor biosynthetic process
HHJ40_RS19195	COG1584	GPR1 FUN34 yaaH family protein
HHJ40_RS19200	COG4735	regulation of single-species biofilm formation
HHJ40_RS19230	COG0583	DNA-binding transcription factor activity
HHJ40_RS19260	COG0196	riboflavin kinase activity
HHJ40_RS19275	COG1047	Peptidyl-prolyl cis-trans
HHJ40_RS19295	COG0505	Belongs to the CarA family
HHJ40_RS19300	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
HHJ40_RS19350	COG0644	oxidoreductase
HHJ40_RS19355	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
HHJ40_RS19360	COG2271	Major facilitator Superfamily
HHJ40_RS19375	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
HHJ40_RS19400	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
HHJ40_RS19405	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
HHJ40_RS19410	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
HHJ40_RS19415	COG0564	pseudouridine synthase activity
HHJ40_RS19425	COG0417	DNA replication proofreading
HHJ40_RS19430	COG0235	Class ii aldolase
HHJ40_RS19445	COG4977	sequence-specific DNA binding
HHJ40_RS19450	COG0586	Pfam SNARE associated Golgi protein
HHJ40_RS19460	COG1178	ABC-type Fe3 transport system permease component
HHJ40_RS19465	COG4143	(ABC) transporter
HHJ40_RS19480	COG2814	Major facilitator Superfamily
HHJ40_RS19495	COG0473	3-isopropylmalate dehydrogenase activity
HHJ40_RS19510	COG0583	DNA-binding transcription factor activity
HHJ40_RS19515	COG0028	Belongs to the TPP enzyme family
HHJ40_RS19520	COG0440	acetolactate synthase activity
HHJ40_RS19530	COG1609	Transcriptional regulator
HHJ40_RS19545	COG3116	cell division
HHJ40_RS19550	COG0768	penicillin binding
HHJ40_RS19555	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
HHJ40_RS19560	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
HHJ40_RS19575	COG0772	Belongs to the SEDS family
HHJ40_RS19590	COG1181	Belongs to the D-alanine--D-alanine ligase family
HHJ40_RS19595	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
HHJ40_RS19600	COG0849	cell division
HHJ40_RS19605	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
HHJ40_RS19625	COG0494	nUDIX hydrolase
HHJ40_RS19640	COG0237	dephospho-CoA kinase activity
HHJ40_RS19650	COG1459	type II secretion system
HHJ40_RS19655	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
HHJ40_RS19660	COG4969	Belongs to the N-Me-Phe pilin family
HHJ40_RS19665	COG0157	Belongs to the NadC ModD family
HHJ40_RS19670	COG3023	N-Acetylmuramoyl-L-alanine amidase
HHJ40_RS19675	COG3725	Membrane protein required for beta-lactamase induction
HHJ40_RS19680	COG1113	amino acid transport
HHJ40_RS19685	COG2186	Transcriptional regulator
HHJ40_RS19690	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
HHJ40_RS19695	COG0508	dehydrogenase complex catalyzes the overall conversion of
HHJ40_RS19700	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
HHJ40_RS19705	COG3064	Membrane
HHJ40_RS19710	COG1049	propionate catabolic process, 2-methylcitrate cycle
HHJ40_RS19735	COG2132	Multicopper oxidase
HHJ40_RS19740	COG3547	Transposase (IS116 IS110 IS902 family)
HHJ40_RS19745	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
HHJ40_RS19755	COG1609	Transcriptional regulator
HHJ40_RS19760	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
HHJ40_RS19760	COG1263	PTS System
HHJ40_RS19765	COG0366	Alpha amylase catalytic
HHJ40_RS19770	COG1328	CTP reductase activity
HHJ40_RS19775	COG0602	queuosine metabolic process
HHJ40_RS19780	COG3783	Cytochrome b(562)
HHJ40_RS19785	COG0312	modulator of DNA gyrase
HHJ40_RS19795	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
HHJ40_RS19810	COG1172	Belongs to the binding-protein-dependent transport system permease family
HHJ40_RS19815	COG1129	ABC transporter
HHJ40_RS19820	COG1879	ABC-type sugar transport system periplasmic component
HHJ40_RS19825	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
HHJ40_RS19830	COG2337	Toxic component of a toxin-antitoxin (TA) module
HHJ40_RS19835	COG2336	PFAM SpoVT AbrB
HHJ40_RS19840	COG2105	PFAM AIG2 family protein
HHJ40_RS19845	COG2911	Protein conserved in bacteria
HHJ40_RS19850	COG0729	surface antigen
HHJ40_RS19860	COG1253	flavin adenine dinucleotide binding
HHJ40_RS19870	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
HHJ40_RS19875	COG1218	3'(2'),5'-bisphosphate nucleotidase
HHJ40_RS19880	COG0737	Belongs to the 5'-nucleotidase family
HHJ40_RS19885	COG1733	regulation of RNA biosynthetic process
HHJ40_RS19890	COG0702	epimerase
HHJ40_RS19895	COG0697	spore germination
HHJ40_RS19905	COG1113	amino acid transport
HHJ40_RS19910	COG0545	Peptidyl-prolyl cis-trans isomerase
HHJ40_RS19915	COG3061	Opacity-associated protein A
HHJ40_RS19920	COG1309	transcriptional regulator
HHJ40_RS19935	COG1024	Enoyl-CoA hydratase
HHJ40_RS19940	COG4670	ketone body catabolic process
HHJ40_RS19945	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
HHJ40_RS19950	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
HHJ40_RS19960	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
HHJ40_RS19970	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
HHJ40_RS20015	COG3037	sugar-specific permease SgaT UlaA
HHJ40_RS20030	COG1073	alpha beta
HHJ40_RS20035	COG3650	response to hydrogen peroxide
HHJ40_RS20045	COG1960	acyl-CoA dehydrogenase activity
HHJ40_RS20050	COG0754	glutathionylspermidine amidase activity
HHJ40_RS20055	COG5463	Belongs to the UPF0441 family
HHJ40_RS20060	COG3766	membrane
HHJ40_RS20070	COG1842	Phage shock protein A
HHJ40_RS20075	COG3789	protein conserved in bacteria
HHJ40_RS20080	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
HHJ40_RS20085	COG0557	exoribonuclease II activity
HHJ40_RS20100	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
HHJ40_RS20105	COG0330	HflC and HflK could
HHJ40_RS20110	COG0330	HflC and HflK could
HHJ40_RS20115	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
HHJ40_RS20135	COG0860	N-Acetylmuramoyl-L-alanine amidase
HHJ40_RS20140	COG0802	atpase or kinase
HHJ40_RS20145	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
HHJ40_RS20145	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
HHJ40_RS20150	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
HHJ40_RS20190	COG3264	Mechanosensitive ion channel
HHJ40_RS20190	COG1511	domain protein
HHJ40_RS20205	COG0531	amino acid
HHJ40_RS20215	COG1053	succinate dehydrogenase
HHJ40_RS20220	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
HHJ40_RS20235	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
HHJ40_RS20240	COG3040	lipid binding
HHJ40_RS20245	COG2076	Multidrug Resistance protein
HHJ40_RS20250	COG5510	response to toxic substance
HHJ40_RS20255	COG5510	response to toxic substance
HHJ40_RS20265	COG1509	lysine 2,3-aminomutase activity
HHJ40_RS20300	COG0531	amino acid
HHJ40_RS20305	COG3030	protein affecting phage T7 exclusion by the F plasmid
HHJ40_RS20310	COG1027	Aspartate ammonia-lyase
HHJ40_RS20315	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
HHJ40_RS20330	COG1309	transcriptional regulator
HHJ40_RS20340	COG3710	Transcriptional regulator
HHJ40_RS20345	COG0531	amino acid
HHJ40_RS20350	COG1982	Orn Lys Arg decarboxylase major
HHJ40_RS20355	COG3104	oligopeptide transport
HHJ40_RS20360	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
HHJ40_RS20375	COG2388	GCN5-related N-acetyl-transferase
HHJ40_RS20380	COG3592	Divergent 4Fe-4S mono-cluster
HHJ40_RS20385	COG3290	protein histidine kinase activity
HHJ40_RS20390	COG4565	transcriptional regulatory protein
HHJ40_RS20395	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
HHJ40_RS20400	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
HHJ40_RS20400	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
HHJ40_RS20405	COG3647	Membrane
HHJ40_RS20410	COG2211	Major facilitator Superfamily
HHJ40_RS20415	COG1486	melibiose metabolic process
HHJ40_RS20420	COG2169	Transcriptional regulator
HHJ40_RS20425	COG1982	Orn Lys Arg decarboxylase major
HHJ40_RS20430	COG2207	Transcriptional regulator
HHJ40_RS20435	COG0531	amino acid
HHJ40_RS20440	COG2194	sulfuric ester hydrolase activity
HHJ40_RS20445	COG0745	RESPONSE REGULATOR receiver
HHJ40_RS20450	COG0642	Histidine kinase
HHJ40_RS20460	COG0477	Major facilitator Superfamily
HHJ40_RS20475	COG2824	Alkylphosphonate utilization operon protein PhnA
HHJ40_RS20480	COG2764	glyoxalase bleomycin resistance protein dioxygenase
HHJ40_RS20490	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
HHJ40_RS20495	COG3639	organic phosphonate transmembrane transporter activity
HHJ40_RS20500	COG2188	Transcriptional regulator
HHJ40_RS20505	COG3624	Phosphonate C-P lyase system protein PhnG
HHJ40_RS20510	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
HHJ40_RS20515	COG3626	phosphonate metabolism
HHJ40_RS20520	COG3627	carbon phosphorus lyase activity
HHJ40_RS20525	COG4107	phosphonate C-P lyase system protein PhnK
HHJ40_RS20530	COG4778	phosphonate C-P lyase system protein PhnL
HHJ40_RS20535	COG3454	Phosphonate metabolism
HHJ40_RS20540	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
HHJ40_RS20545	COG0456	acetyltransferase
HHJ40_RS20550	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
HHJ40_RS20560	COG0698	ribose 5-phosphate isomerase
HHJ40_RS20565	COG1737	Transcriptional regulator
HHJ40_RS20570	COG1879	ABC-type sugar transport system periplasmic component
HHJ40_RS20575	COG1129	ABC transporter
HHJ40_RS20580	COG1172	Belongs to the binding-protein-dependent transport system permease family
HHJ40_RS20585	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
HHJ40_RS20590	COG1940	carbohydrate kinase activity
HHJ40_RS20595	COG2015	COG2015, Alkyl sulfatase and related hydrolases
HHJ40_RS20605	COG1566	PFAM secretion protein HlyD family protein
HHJ40_RS20610	COG1289	transmembrane transporter activity
HHJ40_RS20625	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
HHJ40_RS20630	COG1301	dicarboxylic acid transport
HHJ40_RS20635	COG4235	cytochrome complex assembly
HHJ40_RS20640	COG3088	subunit of a heme lyase
HHJ40_RS20645	COG1138	Cytochrome C-type biogenesis protein
HHJ40_RS20650	COG3301	Polysulphide reductase, NrfD
HHJ40_RS20655	COG0437	4 iron, 4 sulfur cluster binding
HHJ40_RS20660	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
HHJ40_RS20670	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
HHJ40_RS20675	COG3162	membrane
HHJ40_RS20690	COG0025	NhaP-type Na H and K H
HHJ40_RS20695	COG2252	PERMEase
HHJ40_RS20700	COG0789	Transcriptional regulator
HHJ40_RS20705	COG2207	Transcriptional regulator
HHJ40_RS20710	COG4943	cyclic-guanylate-specific phosphodiesterase activity
HHJ40_RS20720	COG0629	single-stranded DNA binding
HHJ40_RS20725	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
HHJ40_RS20730	COG2315	Protein conserved in bacteria
HHJ40_RS20735	COG0432	Pfam Uncharacterised protein family UPF0047
HHJ40_RS20740	COG3700	Belongs to the class B bacterial acid phosphatase family
HHJ40_RS20750	COG1448	Aminotransferase
HHJ40_RS20755	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
HHJ40_RS20760	COG0305	Participates in initiation and elongation during chromosome replication
HHJ40_RS20765	COG0604	alcohol dehydrogenase
HHJ40_RS20775	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
HHJ40_RS20785	COG0735	belongs to the Fur family
HHJ40_RS20790	COG3237	CsbD-like
HHJ40_RS20795	COG0534	Mate efflux family protein
HHJ40_RS20805	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
HHJ40_RS20840	COG3842	ATPase activity
HHJ40_RS20845	COG2182	Extracellular solute-binding protein
HHJ40_RS20850	COG1175	transmembrane transport
HHJ40_RS20855	COG3833	ABC-type maltose transport systems, permease component
HHJ40_RS20860	COG0477	Major facilitator Superfamily
HHJ40_RS20860	COG2814	Major facilitator Superfamily
HHJ40_RS20875	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
HHJ40_RS20900	COG0527	aspartate kinase activity
HHJ40_RS20905	COG0542	response to heat
HHJ40_RS20910	COG3541	Predicted nucleotidyltransferase
HHJ40_RS20925	COG1187	pseudouridine synthase activity
HHJ40_RS20970	COG1283	sodium-dependent phosphate transmembrane transporter activity
HHJ40_RS20975	COG0646	methionine synthase
HHJ40_RS20975	COG1410	methionine synthase
HHJ40_RS20980	COG1414	Transcriptional regulator
HHJ40_RS20995	COG2224	Isocitrate lyase
HHJ40_RS21000	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
HHJ40_RS21010	COG0456	acetyltransferase
HHJ40_RS21040	COG0151	Belongs to the GarS family
HHJ40_RS21045	COG2204	response regulator
HHJ40_RS21050	COG4191	Histidine kinase
HHJ40_RS21055	COG3678	ATP-independent chaperone mediated protein folding
HHJ40_RS21070	COG3068	Protein conserved in bacteria
HHJ40_RS21105	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
HHJ40_RS21110	COG2104	thiamine diphosphate biosynthetic process
HHJ40_RS21120	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
HHJ40_RS21155	COG0250	Participates in transcription elongation, termination and antitermination
HHJ40_RS21160	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
HHJ40_RS21195	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
HHJ40_RS21195	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
HHJ40_RS21225	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
HHJ40_RS21230	COG4206	TonB-dependent receptor
HHJ40_RS21245	COG1309	transcriptional regulator
HHJ40_RS21255	COG0583	DNA-binding transcription factor activity
HHJ40_RS21270	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
HHJ40_RS21285	COG2194	sulfuric ester hydrolase activity
HHJ40_RS21290	COG2207	Transcriptional regulator
HHJ40_RS21295	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
HHJ40_RS21300	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
HHJ40_RS21305	COG1882	Formate acetyltransferase
HHJ40_RS21310	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
HHJ40_RS21315	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
HHJ40_RS21320	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
HHJ40_RS21320	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ40_RS21320	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ40_RS21325	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
HHJ40_RS21330	COG0371	Dehydrogenase
HHJ40_RS21335	COG3738	Protein conserved in bacteria
HHJ40_RS21340	COG0697	spore germination
HHJ40_RS21350	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
HHJ40_RS21355	COG0527	aspartate kinase activity
HHJ40_RS21355	COG0460	homoserine dehydrogenase
HHJ40_RS21360	COG0626	cystathionine gamma-synthase activity
HHJ40_RS21370	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
HHJ40_RS21395	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
HHJ40_RS21400	COG1609	Transcriptional regulator
HHJ40_RS21405	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
HHJ40_RS21420	COG1575	Belongs to the MenA family. Type 1 subfamily
HHJ40_RS21435	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
HHJ40_RS21445	COG1494	fructose-1,6-bisphosphatase
HHJ40_RS21455	COG0589	response to stress
HHJ40_RS21460	COG3691	Protein conserved in bacteria
HHJ40_RS21465	COG3152	Membrane
HHJ40_RS21485	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
HHJ40_RS21500	COG3678	ATP-independent chaperone mediated protein folding
HHJ40_RS21505	COG0745	RESPONSE REGULATOR receiver
HHJ40_RS21510	COG2205	protein histidine kinase activity
HHJ40_RS21515	COG2258	MOSC domain
HHJ40_RS21525	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
HHJ40_RS21565	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ40_RS21570	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
HHJ40_RS21570	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
HHJ40_RS21575	COG1363	Peptidase, m42
HHJ40_RS21580	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ40_RS21580	COG3711	transcriptional antiterminator
HHJ40_RS21600	COG0437	4 iron, 4 sulfur cluster binding
HHJ40_RS21605	COG2864	formate dehydrogenase
HHJ40_RS21615	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
HHJ40_RS21620	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
HHJ40_RS21630	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
HHJ40_RS21640	COG0456	acetyltransferase
HHJ40_RS21655	COG1011	Hydrolase
HHJ40_RS21665	COG0477	Major facilitator Superfamily
HHJ40_RS21675	COG1063	alcohol dehydrogenase
HHJ40_RS21680	COG3684	Belongs to the aldolase LacD family
HHJ40_RS21685	COG2084	Dehydrogenase
HHJ40_RS21690	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
HHJ40_RS21695	COG1349	DNA-binding transcription factor activity
HHJ40_RS21700	COG2271	Major facilitator Superfamily
HHJ40_RS21705	COG1082	Xylose isomerase domain protein TIM barrel
HHJ40_RS21710	COG2188	Transcriptional regulator
HHJ40_RS21720	COG0174	glutamine synthetase
HHJ40_RS21725	COG3852	Histidine kinase
HHJ40_RS21730	COG2204	response regulator
HHJ40_RS21740	COG0635	Involved in the biosynthesis of porphyrin-containing compound
HHJ40_RS21755	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
HHJ40_RS21755	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
HHJ40_RS21760	COG0204	Acyl-transferase
HHJ40_RS21765	COG5339	Protein conserved in bacteria
HHJ40_RS21770	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
HHJ40_RS21775	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
HHJ40_RS21780	COG3084	Protein conserved in bacteria
HHJ40_RS21785	COG0746	molybdenum cofactor guanylyltransferase activity
HHJ40_RS21790	COG1763	Mo-molybdopterin cofactor biosynthetic process
HHJ40_RS21820	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
HHJ40_RS21825	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
HHJ40_RS21830	COG1739	Uncharacterized protein family UPF0029
HHJ40_RS21850	COG0543	2 iron, 2 sulfur cluster binding
HHJ40_RS21855	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
HHJ40_RS21860	COG0250	Participates in transcription elongation, termination and antitermination
HHJ40_RS21870	COG0805	protein transport
HHJ40_RS21875	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
HHJ40_RS21880	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
HHJ40_RS21890	COG3165	ubiquinone biosynthetic process from chorismate
HHJ40_RS21900	COG1322	Protein conserved in bacteria
HHJ40_RS21905	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
HHJ40_RS21910	COG0412	Dienelactone hydrolase
HHJ40_RS21920	COG0583	DNA-binding transcription factor activity
HHJ40_RS21925	COG0697	spore germination
HHJ40_RS21930	COG0561	phosphatase activity
HHJ40_RS21935	COG2267	carboxylic ester hydrolase activity
HHJ40_RS21940	COG1280	lysine exporter protein (LysE YggA)
HHJ40_RS21945	COG1280	lysine exporter protein (LysE YggA)
HHJ40_RS21950	COG0514	ATP-dependent DNA helicase (RecQ)
HHJ40_RS21955	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
HHJ40_RS21960	COG2050	protein possibly involved in aromatic compounds catabolism
HHJ40_RS21965	COG2962	Rard protein
HHJ40_RS21990	COG0598	Magnesium transport protein CorA
HHJ40_RS21995	COG3698	Phosphodiester glycosidase
HHJ40_RS22000	COG0210	DNA helicase
HHJ40_RS22005	COG1011	Hydrolase
HHJ40_RS22015	COG3159	Protein conserved in bacteria
HHJ40_RS22025	COG5567	small periplasmic lipoprotein
HHJ40_RS22050	COG3072	Adenylate cyclase
HHJ40_RS22060	COG1587	Uroporphyrinogen-III synthase
HHJ40_RS22065	COG2959	enzyme of heme biosynthesis
HHJ40_RS22070	COG3071	HemY protein
HHJ40_RS22075	COG3119	arylsulfatase activity
HHJ40_RS22080	COG0641	radical SAM
HHJ40_RS22105	COG1113	amino acid transport
HHJ40_RS22125	COG2244	polysaccharide biosynthetic process
HHJ40_RS22130	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
HHJ40_RS22135	COG0456	acetyltransferase
HHJ40_RS22140	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
HHJ40_RS22145	COG1088	dTDP-glucose 4,6-dehydratase activity
HHJ40_RS22150	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
HHJ40_RS22155	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
HHJ40_RS22160	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
HHJ40_RS22165	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
HHJ40_RS22170	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
HHJ40_RS22180	COG3118	belongs to the thioredoxin family
HHJ40_RS22195	COG0210	DNA helicase
HHJ40_RS22200	COG3692	DNA binding
HHJ40_RS22205	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
HHJ40_RS22215	COG0583	DNA-binding transcription factor activity
HHJ40_RS22220	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
HHJ40_RS22230	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
HHJ40_RS22235	COG3978	acetolactate synthase activity
HHJ40_RS22255	COG0606	chelatase, subunit chli
HHJ40_RS22260	COG3085	chromosome segregation
HHJ40_RS22300	COG2186	Transcriptional regulator
HHJ40_RS22305	COG0477	Major facilitator Superfamily
HHJ40_RS22310	COG1609	Transcriptional regulator
HHJ40_RS22315	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
HHJ40_RS22320	COG1879	ABC-type sugar transport system periplasmic component
HHJ40_RS22325	COG1172	Belongs to the binding-protein-dependent transport system permease family
HHJ40_RS22330	COG1129	ABC transporter
HHJ40_RS22360	COG1522	sequence-specific DNA binding
HHJ40_RS22365	COG0716	FMN binding
HHJ40_RS22380	COG3312	ion transport
HHJ40_RS22445	COG3188	usher protein
HHJ40_RS22455	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
HHJ40_RS22460	COG0573	inorganic phosphate transmembrane transporter activity
HHJ40_RS22465	COG0581	inorganic phosphate transmembrane transporter activity
HHJ40_RS22470	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
HHJ40_RS22475	COG0704	Plays a role in the regulation of phosphate uptake
HHJ40_RS22480	COG3711	transcriptional antiterminator
HHJ40_RS22485	COG2190	(PTS) system
HHJ40_RS22485	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
HHJ40_RS22485	COG1263	PTS System
HHJ40_RS22490	COG2723	6-phospho-beta-galactosidase activity
HHJ40_RS22500	COG2382	esterase
HHJ40_RS22505	COG0363	glucosamine-6-phosphate deaminase activity
HHJ40_RS22510	COG3196	Protein conserved in bacteria
HHJ40_RS22520	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
HHJ40_RS22525	COG2252	PERMEase
HHJ40_RS22530	COG0431	NADPH-dependent FMN reductase
HHJ40_RS22535	COG2091	lysine biosynthetic process via aminoadipic acid
HHJ40_RS22550	COG0814	amino acid
HHJ40_RS22620	COG3121	Chaperone
HHJ40_RS22625	COG3188	usher protein
HHJ40_RS22690	COG3210	domain, Protein
HHJ40_RS22690	COG3468	outer membrane autotransporter barrel domain protein
HHJ40_RS22795	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
HHJ40_RS22995	COG2200	EAL domain
HHJ40_RS22995	COG2771	luxR family
HHJ40_RS23000	COG2200	EAL domain