locus-tag	class	description
HHJ42_RS00025	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
HHJ42_RS00045	COG0551	DNA topoisomerase type I activity
HHJ42_RS00055	COG0758	DNA mediated transformation
HHJ42_RS00075	COG0569	domain protein
HHJ42_RS00085	COG3036	rescue of stalled ribosome
HHJ42_RS00090	COG0789	Transcriptional regulator
HHJ42_RS00130	COG0201	protein transport
HHJ42_RS00220	COG0089	rRNA binding
HHJ42_RS00245	COG3267	Type II secretory pathway component ExeA
HHJ42_RS00245	COG3409	Peptidoglycan-binding domain 1 protein
HHJ42_RS00250	COG3031	protein transport across the cell outer membrane
HHJ42_RS00255	COG1450	Type ii and iii secretion system protein
HHJ42_RS00260	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
HHJ42_RS00265	COG1459	type II secretion system
HHJ42_RS00270	COG2165	general secretion pathway protein
HHJ42_RS00275	COG2165	general secretion pathway protein
HHJ42_RS00280	COG2165	general secretion pathway protein
HHJ42_RS00285	COG4795	General secretion pathway protein
HHJ42_RS00290	COG3156	type II secretion system protein K
HHJ42_RS00300	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
HHJ42_RS00305	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
HHJ42_RS00310	COG2193	ferroxidase activity
HHJ42_RS00315	COG2906	2 iron, 2 sulfur cluster binding
HHJ42_RS00320	COG3979	chitinase
HHJ42_RS00360	COG2964	Protein conserved in bacteria
HHJ42_RS00365	COG0545	Peptidyl-prolyl cis-trans isomerase
HHJ42_RS00375	COG1047	Peptidyl-prolyl cis-trans
HHJ42_RS00380	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
HHJ42_RS00395	COG0488	(ABC) transporter
HHJ42_RS00400	COG0429	hydrolase of the alpha beta-hydrolase fold
HHJ42_RS00410	COG3954	Phosphoribulokinase
HHJ42_RS00415	COG1765	OsmC-like protein
HHJ42_RS00420	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
HHJ42_RS00425	COG1289	transmembrane transporter activity
HHJ42_RS00430	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
HHJ42_RS00435	COG0512	Glutamine amidotransferase of anthranilate synthase
HHJ42_RS00440	COG2184	nucleotidyltransferase activity
HHJ42_RS00450	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
HHJ42_RS00460	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
HHJ42_RS00465	COG2146	nitrite reductase [NAD(P)H] activity
HHJ42_RS00470	COG2116	formate transmembrane transporter activity
HHJ42_RS00485	COG0626	cystathionine gamma-synthase activity
HHJ42_RS00500	COG1735	metal-dependent hydrolase with the TIM-barrel fold
HHJ42_RS00505	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
HHJ42_RS00510	COG3457	Alanine racemase
HHJ42_RS00520	COG2188	Transcriptional regulator
HHJ42_RS00525	COG0180	Tryptophanyl-tRNA synthetase
HHJ42_RS00530	COG0546	phosphoglycolate phosphatase activity
HHJ42_RS00535	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
HHJ42_RS00540	COG0338	D12 class N6 adenine-specific DNA methyltransferase
HHJ42_RS00545	COG3266	domain, Protein
HHJ42_RS00560	COG4796	Type ii and iii secretion system protein
HHJ42_RS00575	COG3166	PFAM Fimbrial assembly family protein
HHJ42_RS00580	COG4972	Pilus assembly protein
HHJ42_RS00585	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
HHJ42_RS00590	COG0494	nUDIX hydrolase
HHJ42_RS00600	COG1011	Hydrolase
HHJ42_RS00605	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
HHJ42_RS00615	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
HHJ42_RS00625	COG2205	protein histidine kinase activity
HHJ42_RS00630	COG0745	RESPONSE REGULATOR receiver
HHJ42_RS00635	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
HHJ42_RS00640	COG2183	response to ionizing radiation
HHJ42_RS00645	COG1918	ferrous iron import across plasma membrane
HHJ42_RS00650	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
HHJ42_RS00660	COG5464	transposase or invertase
HHJ42_RS00680	COG2610	gluconate transmembrane transporter activity
HHJ42_RS00685	COG1640	4-alpha-glucanotransferase
HHJ42_RS00690	COG0058	SHG alpha-glucan phosphorylase activity
HHJ42_RS00705	COG1690	Belongs to the RtcB family
HHJ42_RS00710	COG4650	regulator
HHJ42_RS00715	COG1349	DNA-binding transcription factor activity
HHJ42_RS00730	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
HHJ42_RS00770	COG3188	usher protein
HHJ42_RS00810	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
HHJ42_RS00815	COG2095	MarC family integral membrane protein
HHJ42_RS00825	COG0514	ATP-dependent DNA helicase (RecQ)
HHJ42_RS00830	COG2610	gluconate transmembrane transporter activity
HHJ42_RS00835	COG3265	gluconokinase activity
HHJ42_RS00840	COG1609	Transcriptional regulator
HHJ42_RS00845	COG1741	Belongs to the pirin family
HHJ42_RS00850	COG0673	inositol 2-dehydrogenase activity
HHJ42_RS00855	COG1247	-acetyltransferase
HHJ42_RS00860	COG3157	Type VI secretion system effector, Hcp
HHJ42_RS00880	COG0405	Gamma-glutamyltransferase
HHJ42_RS00890	COG0584	glycerophosphoryl diester phosphodiesterase
HHJ42_RS00915	COG0410	ABC transporter
HHJ42_RS00920	COG0411	ABC transporter
HHJ42_RS00925	COG4177	L-phenylalanine transmembrane transporter activity
HHJ42_RS00930	COG0559	Belongs to the binding-protein-dependent transport system permease family
HHJ42_RS00935	COG0683	leucine binding
HHJ42_RS00940	COG0456	acetyltransferase
HHJ42_RS00945	COG0683	leucine binding
HHJ42_RS00950	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
HHJ42_RS00955	COG2177	Part of the ABC transporter FtsEX involved in
HHJ42_RS00960	COG2884	Cell division ATP-binding protein ftsE
HHJ42_RS00965	COG0552	protein localization to endoplasmic reticulum
HHJ42_RS00970	COG0742	ribosomal rna small subunit methyltransferase
HHJ42_RS00975	COG3776	membrane
HHJ42_RS00985	COG3714	YhhN family
HHJ42_RS01000	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
HHJ42_RS01010	COG0477	Major facilitator Superfamily
HHJ42_RS01015	COG0628	permease
HHJ42_RS01020	COG2091	lysine biosynthetic process via aminoadipic acid
HHJ42_RS01025	COG0747	negative chemotaxis
HHJ42_RS01030	COG0601	transmembrane transport
HHJ42_RS01035	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
HHJ42_RS01055	COG0842	Transport permease protein
HHJ42_RS01060	COG1129	ABC transporter
HHJ42_RS01060	COG0842	Transport permease protein
HHJ42_RS01065	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
HHJ42_RS01075	COG2081	HI0933 family
HHJ42_RS01080	COG0306	phosphate transporter
HHJ42_RS01090	COG0589	response to stress
HHJ42_RS01095	COG3104	oligopeptide transport
HHJ42_RS01105	COG0339	signal peptide processing
HHJ42_RS01110	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
HHJ42_RS01115	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
HHJ42_RS01125	COG1393	Belongs to the ArsC family
HHJ42_RS01135	COG3065	identical protein binding
HHJ42_RS01140	COG2197	response regulator
HHJ42_RS01145	COG3720	iron ion transport
HHJ42_RS01150	COG4771	TonB-dependent receptor
HHJ42_RS01165	COG3721	Heme iron utilization protein
HHJ42_RS01175	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
HHJ42_RS01185	COG1285	pathogenesis
HHJ42_RS01200	COG3247	response to pH
HHJ42_RS01205	COG2771	luxR family
HHJ42_RS01215	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
HHJ42_RS01220	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
HHJ42_RS01225	COG2207	Transcriptional regulator
HHJ42_RS01230	COG2207	Transcriptional regulator
HHJ42_RS01235	COG0076	glutamate decarboxylase activity
HHJ42_RS01240	COG1858	cytochrome C peroxidase
HHJ42_RS01250	COG2197	response regulator
HHJ42_RS01255	COG0583	DNA-binding transcription factor activity
HHJ42_RS01260	COG1295	ribonuclease BN
HHJ42_RS01265	COG0477	Major facilitator Superfamily
HHJ42_RS01270	COG2982	Protein involved in outer membrane biogenesis
HHJ42_RS01275	COG2200	EAL domain
HHJ42_RS01280	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
HHJ42_RS01285	COG0612	Peptidase, M16
HHJ42_RS01295	COG2199	diguanylate cyclase activity
HHJ42_RS01295	COG2200	EAL domain
HHJ42_RS01305	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
HHJ42_RS01310	COG1215	transferase activity, transferring glycosyl groups
HHJ42_RS01340	COG2194	sulfuric ester hydrolase activity
HHJ42_RS01350	COG0814	amino acid
HHJ42_RS01355	COG4608	Belongs to the ABC transporter superfamily
HHJ42_RS01360	COG0444	Belongs to the ABC transporter superfamily
HHJ42_RS01365	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
HHJ42_RS01370	COG0601	transmembrane transport
HHJ42_RS01380	COG0747	negative chemotaxis
HHJ42_RS01390	COG2194	sulfuric ester hydrolase activity
HHJ42_RS01395	COG3539	Fimbrial protein
HHJ42_RS01400	COG3539	Fimbrial protein
HHJ42_RS01410	COG3121	Chaperone
HHJ42_RS01415	COG3539	Fimbrial protein
HHJ42_RS01420	COG2223	nitrite transmembrane transporter activity
HHJ42_RS01430	COG2818	Glycosylase
HHJ42_RS01435	COG0456	acetyltransferase
HHJ42_RS01440	COG0243	molybdopterin cofactor binding
HHJ42_RS01445	COG2885	chlorophyll binding
HHJ42_RS01460	COG2944	sequence-specific DNA binding
HHJ42_RS01465	COG1278	Cold shock
HHJ42_RS01490	COG3274	enterobacterial common antigen metabolic process
HHJ42_RS01495	COG4682	membrane
HHJ42_RS01500	COG4682	membrane
HHJ42_RS01505	COG1070	Carbohydrate kinase
HHJ42_RS01515	COG4213	ABC transporter substrate-binding protein
HHJ42_RS01525	COG4214	carbohydrate transport
HHJ42_RS01530	COG2207	Transcriptional regulator
HHJ42_RS01530	COG1609	Transcriptional regulator
HHJ42_RS01535	COG2992	FlgJ-related protein
HHJ42_RS01540	COG0366	Alpha amylase catalytic
HHJ42_RS01550	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
HHJ42_RS01555	COG1414	Transcriptional regulator
HHJ42_RS01565	COG2731	YhcH YjgK YiaL family protein
HHJ42_RS01575	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
HHJ42_RS01580	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
HHJ42_RS01585	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
HHJ42_RS01590	COG1070	Carbohydrate kinase
HHJ42_RS01595	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
HHJ42_RS01600	COG3623	hexulose-6-phosphate isomerase
HHJ42_RS01605	COG0235	Class ii aldolase
HHJ42_RS01610	COG1012	belongs to the aldehyde dehydrogenase family
HHJ42_RS01620	COG1454	alcohol dehydrogenase
HHJ42_RS01625	COG3276	selenocysteine insertion sequence binding
HHJ42_RS01635	COG0625	glutathione transferase activity
HHJ42_RS01665	COG1566	PFAM secretion protein HlyD family protein
HHJ42_RS01675	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ42_RS01675	COG2213	PTS system mannitol-specific
HHJ42_RS01685	COG3722	fumarate hydratase activity
HHJ42_RS01705	COG5295	Hep Hag repeat protein
HHJ42_RS01710	COG1620	l-lactate permease
HHJ42_RS01715	COG2186	Transcriptional regulator
HHJ42_RS01725	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
HHJ42_RS01730	COG1045	serine acetyltransferase
HHJ42_RS01745	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
HHJ42_RS01750	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
HHJ42_RS01760	COG4942	peptidase
HHJ42_RS01765	COG2861	carbohydrate metabolic process
HHJ42_RS01770	COG1216	Glycosyl transferase, family 2
HHJ42_RS01780	COG0156	8-amino-7-oxononanoate synthase activity
HHJ42_RS01790	COG0859	PFAM glycosyl transferase family 9
HHJ42_RS01795	COG0859	PFAM glycosyl transferase family 9
HHJ42_RS01800	COG3307	-O-antigen
HHJ42_RS01805	COG1216	Glycosyl transferase, family 2
HHJ42_RS01810	COG1442	glycosyl transferase family 8
HHJ42_RS01815	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
HHJ42_RS01830	COG0515	serine threonine protein kinase
HHJ42_RS01835	COG0438	transferase activity, transferring glycosyl groups
HHJ42_RS01840	COG0859	PFAM glycosyl transferase family 9
HHJ42_RS01845	COG1519	Transferase
HHJ42_RS01855	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
HHJ42_RS01875	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
HHJ42_RS01900	COG1561	YicC-like family, N-terminal region
HHJ42_RS01905	COG3645	SOS response
HHJ42_RS01910	COG2860	membrane
HHJ42_RS01920	COG0194	GDP metabolic process
HHJ42_RS01930	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
HHJ42_RS01940	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
HHJ42_RS01945	COG0786	glutamate:sodium symporter activity
HHJ42_RS01950	COG2233	PERMEase
HHJ42_RS01955	COG2982	Protein involved in outer membrane biogenesis
HHJ42_RS01965	COG1940	carbohydrate kinase activity
HHJ42_RS01980	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
HHJ42_RS01980	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
HHJ42_RS01985	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
HHJ42_RS01990	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ42_RS01990	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
HHJ42_RS01990	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
HHJ42_RS01995	COG3711	transcriptional antiterminator
HHJ42_RS02000	COG1501	Belongs to the glycosyl hydrolase 31 family
HHJ42_RS02005	COG2211	Major facilitator Superfamily
HHJ42_RS02025	COG0697	spore germination
HHJ42_RS02030	COG1464	Belongs to the NlpA lipoprotein family
HHJ42_RS02050	COG2252	PERMEase
HHJ42_RS02060	COG2271	Major facilitator Superfamily
HHJ42_RS02065	COG2271	Major facilitator Superfamily
HHJ42_RS02070	COG3851	Histidine kinase
HHJ42_RS02075	COG2197	response regulator
HHJ42_RS02080	COG0440	acetolactate synthase activity
HHJ42_RS02085	COG0028	Belongs to the TPP enzyme family
HHJ42_RS02095	COG2814	Major facilitator Superfamily
HHJ42_RS02100	COG0641	radical SAM
HHJ42_RS02110	COG2149	membrane
HHJ42_RS02115	COG3119	arylsulfatase activity
HHJ42_RS02120	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
HHJ42_RS02125	COG2207	Transcriptional regulator
HHJ42_RS02145	COG5645	(Lipo)protein
HHJ42_RS02150	COG0823	Involved in the tonB-independent uptake of proteins
HHJ42_RS02160	COG2271	Major facilitator Superfamily
HHJ42_RS02170	COG0800	Aldolase
HHJ42_RS02175	COG3734	2-keto-3-deoxy-galactonokinase
HHJ42_RS02180	COG2186	Transcriptional regulator
HHJ42_RS02190	COG0561	phosphatase activity
HHJ42_RS02195	COG3753	Protein conserved in bacteria
HHJ42_RS02200	COG0187	DNA topoisomerase II activity
HHJ42_RS02210	COG0592	DNA-directed DNA polymerase activity
HHJ42_RS02260	COG0814	amino acid
HHJ42_RS02270	COG0583	DNA-binding transcription factor activity
HHJ42_RS02275	COG2091	lysine biosynthetic process via aminoadipic acid
HHJ42_RS02280	COG0431	NADPH-dependent FMN reductase
HHJ42_RS02285	COG2252	PERMEase
HHJ42_RS02290	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
HHJ42_RS02300	COG0363	glucosamine-6-phosphate deaminase activity
HHJ42_RS02305	COG2382	esterase
HHJ42_RS02310	COG4580	involved in the transport of maltose and maltodextrins
HHJ42_RS02315	COG2723	6-phospho-beta-galactosidase activity
HHJ42_RS02320	COG2190	(PTS) system
HHJ42_RS02320	COG1263	PTS System
HHJ42_RS02320	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
HHJ42_RS02325	COG3711	transcriptional antiterminator
HHJ42_RS02330	COG0704	Plays a role in the regulation of phosphate uptake
HHJ42_RS02335	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
HHJ42_RS02340	COG0581	inorganic phosphate transmembrane transporter activity
HHJ42_RS02345	COG0573	inorganic phosphate transmembrane transporter activity
HHJ42_RS02350	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
HHJ42_RS02405	COG3312	ion transport
HHJ42_RS02420	COG0716	FMN binding
HHJ42_RS02425	COG1522	sequence-specific DNA binding
HHJ42_RS02450	COG1869	D-ribose catabolic process
HHJ42_RS02455	COG1129	ABC transporter
HHJ42_RS02460	COG1172	Belongs to the binding-protein-dependent transport system permease family
HHJ42_RS02465	COG1879	ABC-type sugar transport system periplasmic component
HHJ42_RS02470	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
HHJ42_RS02475	COG1609	Transcriptional regulator
HHJ42_RS02480	COG0477	Major facilitator Superfamily
HHJ42_RS02485	COG2186	Transcriptional regulator
HHJ42_RS02525	COG3085	chromosome segregation
HHJ42_RS02530	COG0606	chelatase, subunit chli
HHJ42_RS02550	COG3978	acetolactate synthase activity
HHJ42_RS02555	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
HHJ42_RS02565	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
HHJ42_RS02570	COG0583	DNA-binding transcription factor activity
HHJ42_RS02580	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
HHJ42_RS02585	COG0210	DNA helicase
HHJ42_RS02600	COG3118	belongs to the thioredoxin family
HHJ42_RS02610	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
HHJ42_RS02615	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
HHJ42_RS02620	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
HHJ42_RS02625	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
HHJ42_RS02630	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
HHJ42_RS02635	COG1088	dTDP-glucose 4,6-dehydratase activity
HHJ42_RS02640	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
HHJ42_RS02645	COG0456	acetyltransferase
HHJ42_RS02650	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
HHJ42_RS02655	COG2244	polysaccharide biosynthetic process
HHJ42_RS02675	COG1113	amino acid transport
HHJ42_RS02700	COG0641	radical SAM
HHJ42_RS02705	COG3119	arylsulfatase activity
HHJ42_RS02710	COG3071	HemY protein
HHJ42_RS02715	COG2959	enzyme of heme biosynthesis
HHJ42_RS02720	COG1587	Uroporphyrinogen-III synthase
HHJ42_RS02730	COG3072	Adenylate cyclase
HHJ42_RS02750	COG5567	small periplasmic lipoprotein
HHJ42_RS02760	COG3159	Protein conserved in bacteria
HHJ42_RS02770	COG1011	Hydrolase
HHJ42_RS02775	COG0210	DNA helicase
HHJ42_RS02780	COG1912	Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase
HHJ42_RS02785	COG3698	Phosphodiester glycosidase
HHJ42_RS02790	COG0598	Magnesium transport protein CorA
HHJ42_RS02805	COG2962	Rard protein
HHJ42_RS02810	COG2050	protein possibly involved in aromatic compounds catabolism
HHJ42_RS02815	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
HHJ42_RS02820	COG0514	ATP-dependent DNA helicase (RecQ)
HHJ42_RS02825	COG1280	lysine exporter protein (LysE YggA)
HHJ42_RS02830	COG1280	lysine exporter protein (LysE YggA)
HHJ42_RS02835	COG2267	carboxylic ester hydrolase activity
HHJ42_RS02840	COG0561	phosphatase activity
HHJ42_RS02845	COG0697	spore germination
HHJ42_RS02850	COG0583	DNA-binding transcription factor activity
HHJ42_RS02865	COG3157	Type VI secretion system effector, Hcp
HHJ42_RS02875	COG1263	PTS System
HHJ42_RS02875	COG2190	(PTS) system
HHJ42_RS02875	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
HHJ42_RS02880	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
HHJ42_RS02885	COG1737	Transcriptional regulator
HHJ42_RS02890	COG0583	DNA-binding transcription factor activity
HHJ42_RS02895	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
HHJ42_RS02905	COG0549	Belongs to the carbamate kinase family
HHJ42_RS02910	COG1304	FMN binding
HHJ42_RS02915	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
HHJ42_RS02925	COG1335	isochorismatase
HHJ42_RS02930	COG0412	Dienelactone hydrolase
HHJ42_RS02935	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
HHJ42_RS02955	COG0800	Aldolase
HHJ42_RS02965	COG1414	Transcriptional regulator
HHJ42_RS02970	COG1322	Protein conserved in bacteria
HHJ42_RS02980	COG3165	ubiquinone biosynthetic process from chorismate
HHJ42_RS02990	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
HHJ42_RS03000	COG0805	protein transport
HHJ42_RS03015	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
HHJ42_RS03020	COG0543	2 iron, 2 sulfur cluster binding
HHJ42_RS03045	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
HHJ42_RS03050	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
HHJ42_RS03080	COG1763	Mo-molybdopterin cofactor biosynthetic process
HHJ42_RS03085	COG0746	molybdenum cofactor guanylyltransferase activity
HHJ42_RS03090	COG3084	Protein conserved in bacteria
HHJ42_RS03095	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
HHJ42_RS03100	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
HHJ42_RS03105	COG5339	Protein conserved in bacteria
HHJ42_RS03110	COG0204	Acyl-transferase
HHJ42_RS03115	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
HHJ42_RS03115	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
HHJ42_RS03130	COG0635	Involved in the biosynthesis of porphyrin-containing compound
HHJ42_RS03140	COG2204	response regulator
HHJ42_RS03145	COG3852	Histidine kinase
HHJ42_RS03150	COG0174	glutamine synthetase
HHJ42_RS03160	COG0561	phosphatase activity
HHJ42_RS03170	COG0635	Involved in the biosynthesis of porphyrin-containing compound
HHJ42_RS03190	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
HHJ42_RS03195	COG2211	Major facilitator Superfamily
HHJ42_RS03200	COG2211	Major facilitator Superfamily
HHJ42_RS03205	COG1501	Belongs to the glycosyl hydrolase 31 family
HHJ42_RS03215	COG2017	converts alpha-aldose to the beta-anomer
HHJ42_RS03220	COG2942	2-epimerase
HHJ42_RS03225	COG3684	Belongs to the aldolase LacD family
HHJ42_RS03230	COG2084	Dehydrogenase
HHJ42_RS03235	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
HHJ42_RS03240	COG1349	DNA-binding transcription factor activity
HHJ42_RS03245	COG1011	Hydrolase
HHJ42_RS03260	COG0456	acetyltransferase
HHJ42_RS03295	COG2864	formate dehydrogenase
HHJ42_RS03300	COG0437	4 iron, 4 sulfur cluster binding
HHJ42_RS03360	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
HHJ42_RS03370	COG2258	MOSC domain
HHJ42_RS03380	COG0745	RESPONSE REGULATOR receiver
HHJ42_RS03385	COG3678	ATP-independent chaperone mediated protein folding
HHJ42_RS03390	COG4974	Belongs to the 'phage' integrase family
HHJ42_RS03450	COG4695	Portal protein
HHJ42_RS03540	COG5301	cellulose 1,4-beta-cellobiosidase activity
HHJ42_RS03610	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
HHJ42_RS03630	COG3152	Membrane
HHJ42_RS03635	COG3691	Protein conserved in bacteria
HHJ42_RS03640	COG0589	response to stress
HHJ42_RS03650	COG1494	fructose-1,6-bisphosphatase
HHJ42_RS03660	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
HHJ42_RS03675	COG1575	Belongs to the MenA family. Type 1 subfamily
HHJ42_RS03690	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
HHJ42_RS03695	COG1609	Transcriptional regulator
HHJ42_RS03700	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
HHJ42_RS03710	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
HHJ42_RS03720	COG0626	cystathionine gamma-synthase activity
HHJ42_RS03725	COG0527	aspartate kinase activity
HHJ42_RS03725	COG0460	homoserine dehydrogenase
HHJ42_RS03735	COG0737	Belongs to the 5'-nucleotidase family
HHJ42_RS03740	COG0737	Belongs to the 5'-nucleotidase family
HHJ42_RS03750	COG0737	Belongs to the 5'-nucleotidase family
HHJ42_RS03755	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
HHJ42_RS03765	COG0697	spore germination
HHJ42_RS03770	COG3738	Protein conserved in bacteria
HHJ42_RS03775	COG0371	Dehydrogenase
HHJ42_RS03780	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
HHJ42_RS03785	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ42_RS03785	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
HHJ42_RS03785	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ42_RS03790	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
HHJ42_RS03795	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
HHJ42_RS03800	COG1882	Formate acetyltransferase
HHJ42_RS03805	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
HHJ42_RS03810	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
HHJ42_RS03815	COG2207	Transcriptional regulator
HHJ42_RS03820	COG2194	sulfuric ester hydrolase activity
HHJ42_RS03835	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
HHJ42_RS03840	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
HHJ42_RS03850	COG4948	Mandelate Racemase Muconate Lactonizing
HHJ42_RS03855	COG2271	Major facilitator Superfamily
HHJ42_RS03860	COG0583	DNA-binding transcription factor activity
HHJ42_RS03870	COG1473	amidohydrolase
HHJ42_RS03875	COG0477	Major facilitator Superfamily
HHJ42_RS03925	COG0812	UDP-N-acetylmuramate dehydrogenase activity
HHJ42_RS03930	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
HHJ42_RS03930	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
HHJ42_RS03965	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
HHJ42_RS03970	COG0250	Participates in transcription elongation, termination and antitermination
HHJ42_RS04005	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
HHJ42_RS04015	COG2104	thiamine diphosphate biosynthetic process
HHJ42_RS04030	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
HHJ42_RS04055	COG3068	Protein conserved in bacteria
HHJ42_RS04070	COG3678	ATP-independent chaperone mediated protein folding
HHJ42_RS04075	COG4191	Histidine kinase
HHJ42_RS04080	COG2204	response regulator
HHJ42_RS04085	COG0151	Belongs to the GarS family
HHJ42_RS04120	COG0456	acetyltransferase
HHJ42_RS04130	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
HHJ42_RS04135	COG2224	Isocitrate lyase
HHJ42_RS04145	COG1414	Transcriptional regulator
HHJ42_RS04150	COG1410	methionine synthase
HHJ42_RS04150	COG0646	methionine synthase
HHJ42_RS04165	COG1283	sodium-dependent phosphate transmembrane transporter activity
HHJ42_RS04210	COG1187	pseudouridine synthase activity
HHJ42_RS04220	COG0527	aspartate kinase activity
HHJ42_RS04245	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
HHJ42_RS04260	COG3833	ABC-type maltose transport systems, permease component
HHJ42_RS04265	COG1175	transmembrane transport
HHJ42_RS04270	COG2182	Extracellular solute-binding protein
HHJ42_RS04275	COG3842	ATPase activity
HHJ42_RS04305	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
HHJ42_RS04315	COG0534	Mate efflux family protein
HHJ42_RS04320	COG3237	CsbD-like
HHJ42_RS04325	COG0735	belongs to the Fur family
HHJ42_RS04330	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
HHJ42_RS04340	COG0604	alcohol dehydrogenase
HHJ42_RS04345	COG0305	Participates in initiation and elongation during chromosome replication
HHJ42_RS04350	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
HHJ42_RS04355	COG1448	Aminotransferase
HHJ42_RS04360	COG0567	Dehydrogenase, E1 component
HHJ42_RS04370	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
HHJ42_RS04375	COG0045	succinate-CoA ligase (ADP-forming) activity
HHJ42_RS04380	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
HHJ42_RS04390	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
HHJ42_RS04395	COG2204	response regulator
HHJ42_RS04405	COG3700	Belongs to the class B bacterial acid phosphatase family
HHJ42_RS04410	COG0432	Pfam Uncharacterised protein family UPF0047
HHJ42_RS04415	COG2315	Protein conserved in bacteria
HHJ42_RS04420	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
HHJ42_RS04425	COG0629	single-stranded DNA binding
HHJ42_RS04435	COG4943	cyclic-guanylate-specific phosphodiesterase activity
HHJ42_RS04440	COG2207	Transcriptional regulator
HHJ42_RS04445	COG0789	Transcriptional regulator
HHJ42_RS04450	COG2252	PERMEase
HHJ42_RS04455	COG0025	NhaP-type Na H and K H
HHJ42_RS04460	COG0583	DNA-binding transcription factor activity
HHJ42_RS04465	COG1380	Effector of murein hydrolase LrgA
HHJ42_RS04470	COG1346	cytolysis
HHJ42_RS04480	COG3162	membrane
HHJ42_RS04485	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
HHJ42_RS04495	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
HHJ42_RS04500	COG0437	4 iron, 4 sulfur cluster binding
HHJ42_RS04505	COG3301	Polysulphide reductase, NrfD
HHJ42_RS04510	COG1138	Cytochrome C-type biogenesis protein
HHJ42_RS04515	COG3088	subunit of a heme lyase
HHJ42_RS04520	COG4235	cytochrome complex assembly
HHJ42_RS04525	COG1301	dicarboxylic acid transport
HHJ42_RS04530	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
HHJ42_RS04535	COG4608	Belongs to the ABC transporter superfamily
HHJ42_RS04540	COG0444	Belongs to the ABC transporter superfamily
HHJ42_RS04550	COG0601	transmembrane transport
HHJ42_RS04570	COG1289	transmembrane transporter activity
HHJ42_RS04575	COG1566	PFAM secretion protein HlyD family protein
HHJ42_RS04590	COG1940	carbohydrate kinase activity
HHJ42_RS04595	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
HHJ42_RS04600	COG1172	Belongs to the binding-protein-dependent transport system permease family
HHJ42_RS04605	COG1129	ABC transporter
HHJ42_RS04610	COG1879	ABC-type sugar transport system periplasmic component
HHJ42_RS04615	COG1737	Transcriptional regulator
HHJ42_RS04620	COG0698	ribose 5-phosphate isomerase
HHJ42_RS04630	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
HHJ42_RS04635	COG0456	acetyltransferase
HHJ42_RS04645	COG3454	Phosphonate metabolism
HHJ42_RS04650	COG4778	phosphonate C-P lyase system protein PhnL
HHJ42_RS04655	COG4107	phosphonate C-P lyase system protein PhnK
HHJ42_RS04660	COG3627	carbon phosphorus lyase activity
HHJ42_RS04665	COG3626	phosphonate metabolism
HHJ42_RS04670	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
HHJ42_RS04675	COG3624	Phosphonate C-P lyase system protein PhnG
HHJ42_RS04680	COG2188	Transcriptional regulator
HHJ42_RS04685	COG3639	organic phosphonate transmembrane transporter activity
HHJ42_RS04690	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
HHJ42_RS04700	COG2764	glyoxalase bleomycin resistance protein dioxygenase
HHJ42_RS04705	COG2824	Alkylphosphonate utilization operon protein PhnA
HHJ42_RS04720	COG0477	Major facilitator Superfamily
HHJ42_RS04730	COG0642	Histidine kinase
HHJ42_RS04735	COG0745	RESPONSE REGULATOR receiver
HHJ42_RS04740	COG2194	sulfuric ester hydrolase activity
HHJ42_RS04745	COG0531	amino acid
HHJ42_RS04750	COG2207	Transcriptional regulator
HHJ42_RS04755	COG1982	Orn Lys Arg decarboxylase major
HHJ42_RS04760	COG2169	Transcriptional regulator
HHJ42_RS04765	COG1486	melibiose metabolic process
HHJ42_RS04770	COG3647	Membrane
HHJ42_RS04775	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
HHJ42_RS04775	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
HHJ42_RS04780	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
HHJ42_RS04785	COG4565	transcriptional regulatory protein
HHJ42_RS04790	COG3290	protein histidine kinase activity
HHJ42_RS04795	COG3592	Divergent 4Fe-4S mono-cluster
HHJ42_RS04800	COG2388	GCN5-related N-acetyl-transferase
HHJ42_RS04815	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
HHJ42_RS04820	COG3104	oligopeptide transport
HHJ42_RS04825	COG1982	Orn Lys Arg decarboxylase major
HHJ42_RS04830	COG0531	amino acid
HHJ42_RS04835	COG3710	Transcriptional regulator
HHJ42_RS04870	COG2003	Belongs to the UPF0758 family
HHJ42_RS04895	COG2378	regulation of single-species biofilm formation
HHJ42_RS04900	COG3596	GTP binding
HHJ42_RS04955	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
HHJ42_RS04965	COG3039	Transposase
HHJ42_RS04975	COG2972	Histidine kinase
HHJ42_RS04980	COG3344	reverse transcriptase
HHJ42_RS04995	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
HHJ42_RS05000	COG1882	Formate acetyltransferase
HHJ42_RS05005	COG0693	protein deglycase activity
HHJ42_RS05015	COG1012	belongs to the aldehyde dehydrogenase family
HHJ42_RS05050	COG4820	ethanolamine utilization protein (EutJ)
HHJ42_RS05055	COG4869	propanediol catabolic process
HHJ42_RS05080	COG2831	hemolysin activation secretion protein
HHJ42_RS05135	COG0604	alcohol dehydrogenase
HHJ42_RS05145	COG0531	amino acid
HHJ42_RS05150	COG1982	Orn Lys Arg decarboxylase major
HHJ42_RS05155	COG0531	amino acid
HHJ42_RS05175	COG1309	transcriptional regulator
HHJ42_RS05180	COG4232	protein-disulfide reductase activity
HHJ42_RS05190	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
HHJ42_RS05195	COG1027	Aspartate ammonia-lyase
HHJ42_RS05200	COG3030	protein affecting phage T7 exclusion by the F plasmid
HHJ42_RS05205	COG0531	amino acid
HHJ42_RS05230	COG1509	lysine 2,3-aminomutase activity
HHJ42_RS05240	COG5510	response to toxic substance
HHJ42_RS05245	COG5510	response to toxic substance
HHJ42_RS05250	COG2076	Multidrug Resistance protein
HHJ42_RS05255	COG3040	lipid binding
HHJ42_RS05260	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
HHJ42_RS05275	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
HHJ42_RS05280	COG1053	succinate dehydrogenase
HHJ42_RS05290	COG0531	amino acid
HHJ42_RS05300	COG3264	Mechanosensitive ion channel
HHJ42_RS05300	COG1511	domain protein
HHJ42_RS05340	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
HHJ42_RS05345	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
HHJ42_RS05345	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
HHJ42_RS05350	COG0802	atpase or kinase
HHJ42_RS05355	COG0860	N-Acetylmuramoyl-L-alanine amidase
HHJ42_RS05375	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
HHJ42_RS05380	COG0330	HflC and HflK could
HHJ42_RS05385	COG0330	HflC and HflK could
HHJ42_RS05390	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
HHJ42_RS05405	COG0557	exoribonuclease II activity
HHJ42_RS05410	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
HHJ42_RS05415	COG1414	Transcriptional regulator
HHJ42_RS05420	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
HHJ42_RS05425	COG2271	Major facilitator Superfamily
HHJ42_RS05430	COG2721	sulfolactate sulfo-lyase activity
HHJ42_RS05435	COG3789	protein conserved in bacteria
HHJ42_RS05440	COG1842	Phage shock protein A
HHJ42_RS05450	COG3766	membrane
HHJ42_RS05455	COG5463	Belongs to the UPF0441 family
HHJ42_RS05460	COG0754	glutathionylspermidine amidase activity
HHJ42_RS05475	COG3650	response to hydrogen peroxide
HHJ42_RS05480	COG1073	alpha beta
HHJ42_RS05495	COG3037	sugar-specific permease SgaT UlaA
HHJ42_RS05500	COG3414	Phosphotransferase system galactitol-specific IIB component
HHJ42_RS05505	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ42_RS05540	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
HHJ42_RS05575	COG3061	Opacity-associated protein A
HHJ42_RS05580	COG0545	Peptidyl-prolyl cis-trans isomerase
HHJ42_RS05585	COG1113	amino acid transport
HHJ42_RS05595	COG0697	spore germination
HHJ42_RS05600	COG0702	epimerase
HHJ42_RS05605	COG1733	regulation of RNA biosynthetic process
HHJ42_RS05615	COG1218	3'(2'),5'-bisphosphate nucleotidase
HHJ42_RS05630	COG1253	flavin adenine dinucleotide binding
HHJ42_RS05640	COG0729	surface antigen
HHJ42_RS05645	COG2911	Protein conserved in bacteria
HHJ42_RS05650	COG2105	PFAM AIG2 family protein
HHJ42_RS05655	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
HHJ42_RS05660	COG1879	ABC-type sugar transport system periplasmic component
HHJ42_RS05665	COG1129	ABC transporter
HHJ42_RS05670	COG1172	Belongs to the binding-protein-dependent transport system permease family
HHJ42_RS05675	COG1172	Belongs to the binding-protein-dependent transport system permease family
HHJ42_RS05685	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
HHJ42_RS05695	COG0312	modulator of DNA gyrase
HHJ42_RS05700	COG3783	Cytochrome b(562)
HHJ42_RS05705	COG0602	queuosine metabolic process
HHJ42_RS05710	COG1328	CTP reductase activity
HHJ42_RS05715	COG0366	Alpha amylase catalytic
HHJ42_RS05720	COG1263	PTS System
HHJ42_RS05720	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
HHJ42_RS05725	COG1609	Transcriptional regulator
HHJ42_RS05735	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
HHJ42_RS05740	COG0251	oxidation-reduction process
HHJ42_RS05760	COG0251	oxidation-reduction process
HHJ42_RS05765	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ42_RS05770	COG1309	transcriptional regulator
HHJ42_RS05775	COG2731	YhcH YjgK YiaL family protein
HHJ42_RS05790	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
HHJ42_RS05795	COG0456	acetyltransferase
HHJ42_RS05800	COG4269	membrane
HHJ42_RS05805	COG0525	valine-tRNA ligase activity
HHJ42_RS05810	COG2927	DNA polymerase III (CHI subunit)
HHJ42_RS05820	COG0795	lipopolysaccharide-transporting ATPase activity
HHJ42_RS05825	COG0795	lipopolysaccharide-transporting ATPase activity
HHJ42_RS05830	COG0433	COG0433 Predicted ATPase
HHJ42_RS05835	COG1609	Transcriptional regulator
HHJ42_RS05840	COG2610	gluconate transmembrane transporter activity
HHJ42_RS05845	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ42_RS05850	COG1063	alcohol dehydrogenase
HHJ42_RS05855	COG3265	gluconokinase activity
HHJ42_RS05860	COG1064	alcohol dehydrogenase
HHJ42_RS05890	COG3385	transposase activity
HHJ42_RS05905	COG0673	inositol 2-dehydrogenase activity
HHJ42_RS05935	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
HHJ42_RS05950	COG2085	NADP oxidoreductase coenzyme F420-dependent
HHJ42_RS05955	COG1120	ATPase activity
HHJ42_RS05960	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
HHJ42_RS05965	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
HHJ42_RS05970	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
HHJ42_RS05975	COG4772	TonB-dependent receptor
HHJ42_RS05980	COG3712	iron ion homeostasis
HHJ42_RS05985	COG1595	DNA-templated transcription, initiation
HHJ42_RS06035	COG4983	Phage plasmid primase, P4 family domain protein
HHJ42_RS06045	COG3468	outer membrane autotransporter barrel domain protein
HHJ42_RS06070	COG2003	Belongs to the UPF0758 family
HHJ42_RS06090	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
HHJ42_RS06100	COG0235	Class ii aldolase
HHJ42_RS06110	COG2390	Transcriptional regulator
HHJ42_RS06115	COG2610	gluconate transmembrane transporter activity
HHJ42_RS06120	COG0129	dihydroxy-acid dehydratase activity
HHJ42_RS06125	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
HHJ42_RS06130	COG1414	Transcriptional regulator
HHJ42_RS06135	COG1349	DNA-binding transcription factor activity
HHJ42_RS06140	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
HHJ42_RS06145	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ42_RS06150	COG0434	BtpA family
HHJ42_RS06155	COG3775	system Galactitol-specific IIC component
HHJ42_RS06160	COG3414	Phosphotransferase system galactitol-specific IIB component
HHJ42_RS06165	COG1363	Peptidase, m42
HHJ42_RS06175	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
HHJ42_RS06180	COG3153	acetyltransferase
HHJ42_RS06195	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
HHJ42_RS06195	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
HHJ42_RS06205	COG3055	Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
HHJ42_RS06210	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
HHJ42_RS06215	COG0582	viral genome integration into host DNA
HHJ42_RS06220	COG4974	Belongs to the 'phage' integrase family
HHJ42_RS06225	COG3539	Fimbrial protein
HHJ42_RS06230	COG3539	Fimbrial protein
HHJ42_RS06235	COG3121	Chaperone
HHJ42_RS06240	COG3188	usher protein
HHJ42_RS06245	COG3539	Fimbrial protein
HHJ42_RS06250	COG3539	Fimbrial protein
HHJ42_RS06255	COG3539	Fimbrial protein
HHJ42_RS06260	COG2610	gluconate transmembrane transporter activity
HHJ42_RS06270	COG0246	Mannitol dehydrogenase
HHJ42_RS06275	COG2186	Transcriptional regulator
HHJ42_RS06295	COG0583	DNA-binding transcription factor activity
HHJ42_RS06300	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
HHJ42_RS06305	COG0700	Nucleoside recognition
HHJ42_RS06310	COG3366	ferrous iron transmembrane transporter activity
HHJ42_RS06320	COG0477	Major facilitator Superfamily
HHJ42_RS06325	COG3204	pilus organization
HHJ42_RS06335	COG1924	4 iron, 4 sulfur cluster binding
HHJ42_RS06340	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
HHJ42_RS06345	COG2733	membrane
HHJ42_RS06355	COG5457	Domain of unknown function (DUF1127)
HHJ42_RS06370	COG0732	type I restriction modification DNA specificity domain
HHJ42_RS06395	COG0523	cobalamin synthesis protein
HHJ42_RS06400	COG2879	small protein
HHJ42_RS06405	COG1966	Carbon starvation protein
HHJ42_RS06410	COG0840	transmembrane signaling receptor activity
HHJ42_RS06425	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
HHJ42_RS06430	COG0025	NhaP-type Na H and K H
HHJ42_RS06435	COG1802	Transcriptional regulator
HHJ42_RS06440	COG1063	alcohol dehydrogenase
HHJ42_RS06445	COG1368	sulfuric ester hydrolase activity
HHJ42_RS06455	COG1484	DNA-dependent DNA replication
HHJ42_RS06470	COG2966	Psort location CytoplasmicMembrane, score
HHJ42_RS06480	COG2197	response regulator
HHJ42_RS06485	COG4114	ferric iron reductase
HHJ42_RS06515	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
HHJ42_RS06520	COG0456	acetyltransferase
HHJ42_RS06525	COG1011	Hydrolase
HHJ42_RS06535	COG2823	Periplasmic or secreted lipoprotein
HHJ42_RS06545	COG4667	esterase of the alpha-beta hydrolase superfamily
HHJ42_RS06550	COG0084	hydrolase, TatD family'
HHJ42_RS06555	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
HHJ42_RS06560	COG1328	CTP reductase activity
HHJ42_RS06595	COG3726	membrane protein affecting hemolysin expression
HHJ42_RS06600	COG0560	Phosphoserine phosphatase
HHJ42_RS06605	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
HHJ42_RS06610	COG1056	cytidyltransferase-related domain
HHJ42_RS06610	COG3172	ATPase kinase involved in NAD metabolism
HHJ42_RS06615	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
HHJ42_RS06625	COG0488	(ABC) transporter
HHJ42_RS06630	COG0741	lytic transglycosylase activity
HHJ42_RS06650	COG2207	Transcriptional regulator
HHJ42_RS06650	COG3708	Transcriptional regulator
HHJ42_RS06655	COG3045	CreA protein
HHJ42_RS06660	COG0745	RESPONSE REGULATOR receiver
HHJ42_RS06665	COG2205	protein histidine kinase activity
HHJ42_RS06670	COG4452	Inner membrane protein CreD
HHJ42_RS06675	COG0745	RESPONSE REGULATOR receiver
HHJ42_RS06685	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
HHJ42_RS06695	COG0527	aspartate kinase activity
HHJ42_RS06695	COG0460	homoserine dehydrogenase
HHJ42_RS06705	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
HHJ42_RS06720	COG1115	amino acid carrier protein
HHJ42_RS06730	COG0521	Mo-molybdopterin cofactor biosynthetic process
HHJ42_RS06735	COG1584	GPR1 FUN34 yaaH family protein
HHJ42_RS06740	COG4735	regulation of single-species biofilm formation
HHJ42_RS06770	COG3119	arylsulfatase activity
HHJ42_RS06785	COG0583	DNA-binding transcription factor activity
HHJ42_RS06800	COG0196	riboflavin kinase activity
HHJ42_RS06815	COG1047	Peptidyl-prolyl cis-trans
HHJ42_RS06835	COG0505	Belongs to the CarA family
HHJ42_RS06840	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
HHJ42_RS06890	COG0644	oxidoreductase
HHJ42_RS06895	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
HHJ42_RS06900	COG2271	Major facilitator Superfamily
HHJ42_RS06915	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
HHJ42_RS06950	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
HHJ42_RS06960	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
HHJ42_RS06965	COG0564	pseudouridine synthase activity
HHJ42_RS06975	COG0417	DNA replication proofreading
HHJ42_RS06980	COG0235	Class ii aldolase
HHJ42_RS06995	COG4977	sequence-specific DNA binding
HHJ42_RS07015	COG0586	Pfam SNARE associated Golgi protein
HHJ42_RS07025	COG1178	ABC-type Fe3 transport system permease component
HHJ42_RS07030	COG4143	(ABC) transporter
HHJ42_RS07070	COG0583	DNA-binding transcription factor activity
HHJ42_RS07075	COG0028	Belongs to the TPP enzyme family
HHJ42_RS07080	COG0440	acetolactate synthase activity
HHJ42_RS07090	COG1609	Transcriptional regulator
HHJ42_RS07105	COG3116	cell division
HHJ42_RS07110	COG0768	penicillin binding
HHJ42_RS07115	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
HHJ42_RS07120	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
HHJ42_RS07130	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
HHJ42_RS07135	COG0772	Belongs to the SEDS family
HHJ42_RS07150	COG1181	Belongs to the D-alanine--D-alanine ligase family
HHJ42_RS07155	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
HHJ42_RS07165	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
HHJ42_RS07185	COG0494	nUDIX hydrolase
HHJ42_RS07200	COG0237	dephospho-CoA kinase activity
HHJ42_RS07210	COG1459	type II secretion system
HHJ42_RS07215	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
HHJ42_RS07220	COG4969	Belongs to the N-Me-Phe pilin family
HHJ42_RS07225	COG0157	Belongs to the NadC ModD family
HHJ42_RS07230	COG3023	N-Acetylmuramoyl-L-alanine amidase
HHJ42_RS07235	COG3725	Membrane protein required for beta-lactamase induction
HHJ42_RS07240	COG1113	amino acid transport
HHJ42_RS07275	COG2186	Transcriptional regulator
HHJ42_RS07280	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
HHJ42_RS07285	COG0508	dehydrogenase complex catalyzes the overall conversion of
HHJ42_RS07290	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
HHJ42_RS07295	COG3064	Membrane
HHJ42_RS07300	COG1049	propionate catabolic process, 2-methylcitrate cycle
HHJ42_RS07325	COG2132	Multicopper oxidase
HHJ42_RS07330	COG4993	Dehydrogenase
HHJ42_RS07335	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
HHJ42_RS07340	COG0288	reversible hydration of carbon dioxide
HHJ42_RS07345	COG1131	(ABC) transporter
HHJ42_RS07350	COG0842	Transport permease protein
HHJ42_RS07355	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ42_RS07360	COG0726	polysaccharide deacetylase
HHJ42_RS07370	COG5464	transposase or invertase
HHJ42_RS07375	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
HHJ42_RS07390	COG3539	Fimbrial protein
HHJ42_RS07395	COG3539	Fimbrial protein
HHJ42_RS07400	COG3539	Fimbrial protein
HHJ42_RS07410	COG3121	Chaperone
HHJ42_RS07415	COG3539	Fimbrial protein
HHJ42_RS07420	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
HHJ42_RS07425	COG0617	tRNA 3'-terminal CCA addition
HHJ42_RS07430	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
HHJ42_RS07435	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
HHJ42_RS07445	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
HHJ42_RS07450	COG1643	Atp-dependent helicase
HHJ42_RS07455	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
HHJ42_RS07460	COG4774	siderophore transport
HHJ42_RS07465	COG1120	ATPase activity
HHJ42_RS07470	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
HHJ42_RS07475	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
HHJ42_RS07500	COG2860	membrane
HHJ42_RS07505	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
HHJ42_RS07520	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
HHJ42_RS07525	COG3835	regulator
HHJ42_RS07535	COG1408	metallophosphoesterase
HHJ42_RS07550	COG0024	Methionine aminopeptidase
HHJ42_RS07575	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
HHJ42_RS07580	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
HHJ42_RS07585	COG0575	Belongs to the CDS family
HHJ42_RS07590	COG0750	zinc metalloprotease
HHJ42_RS07600	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
HHJ42_RS07605	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
HHJ42_RS07630	COG0587	DNA-directed DNA polymerase activity
HHJ42_RS07645	COG0346	lactoylglutathione lyase activity
HHJ42_RS07650	COG0037	tRNA processing
HHJ42_RS07655	COG4568	rho-dependent transcription termination
HHJ42_RS07665	COG4681	YaeQ
HHJ42_RS07670	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
HHJ42_RS07680	COG0791	NLP P60 protein
HHJ42_RS07690	COG1720	tRNA m6t6A37 methyltransferase activity
HHJ42_RS07700	COG1464	Belongs to the NlpA lipoprotein family
HHJ42_RS07705	COG2011	ABC-type metal ion transport system permease component
HHJ42_RS07710	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
HHJ42_RS07715	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
HHJ42_RS07755	COG0583	DNA-binding transcription factor activity
HHJ42_RS07765	COG2226	methyltransferase
HHJ42_RS07770	COG0741	lytic transglycosylase activity
HHJ42_RS07770	COG1388	LysM domain
HHJ42_RS07780	COG2226	methyltransferase
HHJ42_RS07790	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
HHJ42_RS07950	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
HHJ42_RS07960	COG1960	acyl-CoA dehydrogenase activity
HHJ42_RS07970	COG0121	glutamine amidotransferase
HHJ42_RS07975	COG3034	peptidoglycan biosynthetic process
HHJ42_RS07980	COG0791	NLP P60 protein
HHJ42_RS07985	COG1943	Transposase
HHJ42_RS08010	COG1987	bacterial-type flagellum assembly
HHJ42_RS08035	COG1677	Flagellar hook-basal body complex protein FliE
HHJ42_RS08045	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
HHJ42_RS08065	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
HHJ42_RS08080	COG0463	Glycosyl transferase, family 2
HHJ42_RS08105	COG1815	bacterial-type flagellum-dependent cell motility
HHJ42_RS08110	COG1558	bacterial-type flagellum-dependent cell motility
HHJ42_RS08120	COG1749	Flagellar hook protein flgE
HHJ42_RS08125	COG4787	bacterial-type flagellum-dependent cell motility
HHJ42_RS08130	COG4786	Flagellar basal body rod
HHJ42_RS08155	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
HHJ42_RS08170	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
HHJ42_RS08175	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
HHJ42_RS08200	COG1191	sigma factor activity
HHJ42_RS08205	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
HHJ42_RS08220	COG2161	toxin-antitoxin pair type II binding
HHJ42_RS08230	COG0454	-acetyltransferase
HHJ42_RS08235	COG1690	Belongs to the RtcB family
HHJ42_RS08240	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
HHJ42_RS08245	COG2195	Cleaves the N-terminal amino acid of tripeptides
HHJ42_RS08265	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
HHJ42_RS08285	COG0582	viral genome integration into host DNA
HHJ42_RS08310	COG3477	response to acidic pH
HHJ42_RS08320	COG0727	PFAM Uncharacterised protein family (UPF0153)
HHJ42_RS08375	COG1902	pentaerythritol trinitrate reductase activity
HHJ42_RS08380	COG1073	alpha beta
HHJ42_RS08385	COG0583	DNA-binding transcription factor activity
HHJ42_RS08395	COG0667	Aldo Keto reductase
HHJ42_RS08400	COG0656	L-ascorbic acid biosynthetic process
HHJ42_RS08405	COG1388	LysM domain
HHJ42_RS08410	COG3708	Transcriptional regulator
HHJ42_RS08410	COG2207	Transcriptional regulator
HHJ42_RS08415	COG0656	L-ascorbic acid biosynthetic process
HHJ42_RS08420	COG3059	membrane
HHJ42_RS08430	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
HHJ42_RS08435	COG2207	Transcriptional regulator
HHJ42_RS08440	COG0247	lactate metabolic process
HHJ42_RS08445	COG1139	Iron-sulfur cluster binding protein
HHJ42_RS08450	COG1556	Lactate utilization protein
HHJ42_RS08460	COG3468	outer membrane autotransporter barrel domain protein
HHJ42_RS08475	COG2771	luxR family
HHJ42_RS08475	COG2200	EAL domain
HHJ42_RS08480	COG0582	viral genome integration into host DNA
HHJ42_RS08500	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
HHJ42_RS08510	COG2200	EAL domain
HHJ42_RS08510	COG2771	luxR family
HHJ42_RS08515	COG0583	DNA-binding transcription factor activity
HHJ42_RS08525	COG0666	response to abiotic stimulus
HHJ42_RS08535	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
HHJ42_RS08545	COG0549	Belongs to the carbamate kinase family
HHJ42_RS08550	COG0402	S-adenosylhomocysteine deaminase activity
HHJ42_RS08555	COG1064	alcohol dehydrogenase
HHJ42_RS08580	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
HHJ42_RS08585	COG0372	Belongs to the citrate synthase family
HHJ42_RS08590	COG2079	MmgE PrpD family protein
HHJ42_RS08595	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
HHJ42_RS08600	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
HHJ42_RS08605	COG0402	S-adenosylhomocysteine deaminase activity
HHJ42_RS08610	COG0110	maltose O-acetyltransferase activity
HHJ42_RS08625	COG1609	Transcriptional regulator
HHJ42_RS08635	COG3122	Protein conserved in bacteria
HHJ42_RS08665	COG1215	transferase activity, transferring glycosyl groups
HHJ42_RS08670	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
HHJ42_RS08675	COG4521	taurine ABC transporter
HHJ42_RS08685	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
HHJ42_RS08690	COG2175	clavaminate synthase activity
HHJ42_RS08695	COG0113	porphobilinogen synthase activity
HHJ42_RS08700	COG3468	outer membrane autotransporter barrel domain protein
HHJ42_RS08705	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
HHJ42_RS08710	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
HHJ42_RS08715	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
HHJ42_RS08735	COG1181	Belongs to the D-alanine--D-alanine ligase family
HHJ42_RS08750	COG1785	Belongs to the alkaline phosphatase family
HHJ42_RS08760	COG3706	GGDEF domain
HHJ42_RS08765	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
HHJ42_RS08785	COG4126	flavin adenine dinucleotide binding
HHJ42_RS08810	COG1940	carbohydrate kinase activity
HHJ42_RS08815	COG2814	Major facilitator Superfamily
HHJ42_RS08820	COG0419	ATPase involved in DNA repair
HHJ42_RS08825	COG0420	3'-5' exonuclease activity
HHJ42_RS08830	COG0745	RESPONSE REGULATOR receiver
HHJ42_RS08835	COG5002	protein histidine kinase activity
HHJ42_RS08840	COG1114	Component of the transport system for branched-chain amino acids
HHJ42_RS08845	COG1113	amino acid transport
HHJ42_RS08870	COG1862	Preprotein translocase
HHJ42_RS08875	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
HHJ42_RS08880	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
HHJ42_RS08885	COG1403	HNH endonuclease
HHJ42_RS08890	COG3248	Nucleoside-binding outer membrane protein
HHJ42_RS08895	COG4238	major outer membrane lipoprotein
HHJ42_RS08905	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
HHJ42_RS08905	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
HHJ42_RS08920	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
HHJ42_RS08925	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
HHJ42_RS08930	COG0667	Aldo Keto reductase
HHJ42_RS08940	COG0142	geranyltranstransferase activity
HHJ42_RS08955	COG0693	protein deglycase activity
HHJ42_RS08960	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
HHJ42_RS08980	COG2814	Major facilitator Superfamily
HHJ42_RS08990	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
HHJ42_RS08995	COG1845	cytochrome c oxidase, subunit III
HHJ42_RS09000	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
HHJ42_RS09005	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
HHJ42_RS09010	COG2223	nitrite transmembrane transporter activity
HHJ42_RS09015	COG3056	Lipoprotein
HHJ42_RS09020	COG0271	Belongs to the BolA IbaG family
HHJ42_RS09040	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
HHJ42_RS09045	COG0776	regulation of translation
HHJ42_RS09050	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
HHJ42_RS09055	COG1555	photosystem II stabilization
HHJ42_RS09060	COG0824	Thioesterase
HHJ42_RS09070	COG4533	DNA binding
HHJ42_RS09080	COG1522	sequence-specific DNA binding
HHJ42_RS09085	COG1132	(ABC) transporter
HHJ42_RS09090	COG1132	(ABC) transporter
HHJ42_RS09095	COG0347	Belongs to the P(II) protein family
HHJ42_RS09100	COG0004	ammonium transporteR
HHJ42_RS09105	COG1946	Acyl-CoA thioesterase
HHJ42_RS09110	COG3126	Type III secretion system lipoprotein chaperone (YscW)
HHJ42_RS09115	COG3695	enzyme binding
HHJ42_RS09125	COG5507	3-demethylubiquinone-9 3-methyltransferase
HHJ42_RS09130	COG4943	cyclic-guanylate-specific phosphodiesterase activity
HHJ42_RS09140	COG0110	maltose O-acetyltransferase activity
HHJ42_RS09155	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
HHJ42_RS09160	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
HHJ42_RS09165	COG1309	transcriptional regulator
HHJ42_RS09170	COG1196	nuclear chromosome segregation
HHJ42_RS09170	COG3264	Mechanosensitive ion channel
HHJ42_RS09180	COG3923	Primosomal replication protein n
HHJ42_RS09185	COG2832	Protein of unknown function (DUF454)
HHJ42_RS09195	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
HHJ42_RS09230	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
HHJ42_RS09235	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
HHJ42_RS09235	COG4651	solute:proton antiporter activity
HHJ42_RS09240	COG2223	nitrite transmembrane transporter activity
HHJ42_RS09245	COG0737	Belongs to the 5'-nucleotidase family
HHJ42_RS09250	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
HHJ42_RS09255	COG3735	TraB family
HHJ42_RS09260	COG3549	Plasmid maintenance system killer
HHJ42_RS09265	COG3093	addiction module antidote protein HigA
HHJ42_RS09270	COG2217	Heavy metal translocating P-type atpase
HHJ42_RS09275	COG2066	Belongs to the glutaminase family
HHJ42_RS09280	COG0531	amino acid
HHJ42_RS09285	COG0789	Transcriptional regulator
HHJ42_RS09310	COG1585	Membrane protein implicated in regulation of membrane protease activity
HHJ42_RS09315	COG0330	HflC and HflK could
HHJ42_RS09320	COG4619	ABC transporter
HHJ42_RS09325	COG0390	transport system, permease component
HHJ42_RS09330	COG3118	belongs to the thioredoxin family
HHJ42_RS09335	COG0300	oxidoreductase activity
HHJ42_RS09340	COG2755	lipolytic protein G-D-S-L family
HHJ42_RS09345	COG4181	ATPase activity
HHJ42_RS09350	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
HHJ42_RS09365	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
HHJ42_RS09370	COG1414	Transcriptional regulator
HHJ42_RS09375	COG3960	tartronate-semialdehyde synthase activity
HHJ42_RS09380	COG3622	Belongs to the hyi family
HHJ42_RS09385	COG2084	Dehydrogenase
HHJ42_RS09390	COG1953	Uracil, thiamine, allantoin
HHJ42_RS09400	COG2233	PERMEase
HHJ42_RS09405	COG1929	Belongs to the glycerate kinase type-1 family
HHJ42_RS09410	COG3257	ureidoglycine aminohydrolase activity
HHJ42_RS09415	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
HHJ42_RS09420	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
HHJ42_RS09425	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
HHJ42_RS09430	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
HHJ42_RS09440	COG0549	Belongs to the carbamate kinase family
HHJ42_RS09445	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
HHJ42_RS09450	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
HHJ42_RS09460	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
HHJ42_RS09465	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
HHJ42_RS09475	COG1988	membrane-bound metal-dependent
HHJ42_RS09480	COG2501	S4 domain
HHJ42_RS09500	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
HHJ42_RS09510	COG4571	Outer membrane protease
HHJ42_RS09520	COG4783	chaperone-mediated protein folding
HHJ42_RS09525	COG1215	transferase activity, transferring glycosyl groups
HHJ42_RS09530	COG5002	protein histidine kinase activity
HHJ42_RS09535	COG0745	RESPONSE REGULATOR receiver
HHJ42_RS09540	COG1538	Outer membrane efflux protein
HHJ42_RS09545	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
HHJ42_RS09550	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
HHJ42_RS09555	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
HHJ42_RS09560	COG1113	amino acid transport
HHJ42_RS09565	COG0668	transmembrane transport
HHJ42_RS09570	COG0778	Nitroreductase
HHJ42_RS09575	COG2315	Protein conserved in bacteria
HHJ42_RS09600	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ42_RS09610	COG1172	Belongs to the binding-protein-dependent transport system permease family
HHJ42_RS09615	COG1129	ABC transporter
HHJ42_RS09625	COG1879	ABC-type sugar transport system periplasmic component
HHJ42_RS09630	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
HHJ42_RS09635	COG2390	Transcriptional regulator
HHJ42_RS09640	COG3959	Transketolase, thiamine diphosphate binding domain
HHJ42_RS09645	COG3958	Transketolase
HHJ42_RS09650	COG2977	Belongs to the P-Pant transferase superfamily
HHJ42_RS09655	COG4771	TonB-dependent receptor
HHJ42_RS09660	COG2382	esterase
HHJ42_RS09665	COG3251	PFAM MbtH domain protein
HHJ42_RS09670	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
HHJ42_RS09670	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
HHJ42_RS09675	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
HHJ42_RS09680	COG1120	ATPase activity
HHJ42_RS09685	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
HHJ42_RS09690	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
HHJ42_RS09700	COG4592	Periplasmic binding protein
HHJ42_RS09705	COG1169	isochorismate synthase
HHJ42_RS09710	COG1021	2,3-dihydroxybenzoate-AMP ligase
HHJ42_RS09715	COG1535	isochorismatase
HHJ42_RS09715	COG3433	isochorismatase activity
HHJ42_RS09720	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ42_RS09725	COG2050	protein possibly involved in aromatic compounds catabolism
HHJ42_RS09730	COG1966	Carbon starvation protein
HHJ42_RS09735	COG2879	small protein
HHJ42_RS09740	COG0371	Dehydrogenase
HHJ42_RS09745	COG0436	Aminotransferase
HHJ42_RS09750	COG1475	DNA binding
HHJ42_RS09755	COG3969	phosphoadenosine phosphosulfate
HHJ42_RS09760	COG0583	DNA-binding transcription factor activity
HHJ42_RS09765	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
HHJ42_RS09770	COG0450	alkyl hydroperoxide reductase
HHJ42_RS09775	COG3634	alkyl hydroperoxide reductase activity
HHJ42_RS09780	COG0589	response to stress
HHJ42_RS09785	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
HHJ42_RS09790	COG3719	Belongs to the RNase T2 family
HHJ42_RS09795	COG0471	metal ion transport
HHJ42_RS09810	COG3051	citrate lyase alpha subunit
HHJ42_RS09815	COG2301	Belongs to the HpcH HpaI aldolase family
HHJ42_RS09825	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
HHJ42_RS09830	COG3290	protein histidine kinase activity
HHJ42_RS09835	COG4565	transcriptional regulatory protein
HHJ42_RS09840	COG3069	C4-dicarboxylate transmembrane transporter activity
HHJ42_RS09860	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
HHJ42_RS09865	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
HHJ42_RS09890	COG1686	Belongs to the peptidase S11 family
HHJ42_RS09895	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
HHJ42_RS09900	COG0772	Belongs to the SEDS family
HHJ42_RS09905	COG0768	penicillin binding
HHJ42_RS09915	COG0799	negative regulation of ribosome biogenesis
HHJ42_RS09920	COG0406	alpha-ribazole phosphatase activity
HHJ42_RS09930	COG1466	dna polymerase III delta subunit
HHJ42_RS09945	COG2888	peptidyl-tyrosine sulfation
HHJ42_RS09955	COG1126	abc transporter atp-binding protein
HHJ42_RS09960	COG0765	amino acid transport
HHJ42_RS09970	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
HHJ42_RS09980	COG0815	Transfers the fatty acyl group on membrane lipoproteins
HHJ42_RS09985	COG4535	Mg2 and Co2 transporter CorC
HHJ42_RS09995	COG1702	phosphate starvation-inducible protein PhoH
HHJ42_RS10005	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
HHJ42_RS10045	COG0367	asparagine synthase
HHJ42_RS10050	COG0647	UMP catabolic process
HHJ42_RS10055	COG1846	Transcriptional regulator
HHJ42_RS10055	COG1940	carbohydrate kinase activity
HHJ42_RS10060	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
HHJ42_RS10070	COG1263	PTS System
HHJ42_RS10070	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
HHJ42_RS10070	COG2190	(PTS) system
HHJ42_RS10090	COG0861	Integral membrane protein TerC family
HHJ42_RS10095	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
HHJ42_RS10105	COG3395	kinase activity
HHJ42_RS10110	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
HHJ42_RS10115	COG1349	DNA-binding transcription factor activity
HHJ42_RS10135	COG0735	belongs to the Fur family
HHJ42_RS10145	COG0716	FMN binding
HHJ42_RS10155	COG0596	Alpha beta hydrolase
HHJ42_RS10160	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
HHJ42_RS10165	COG0033	Phosphoglucomutase
HHJ42_RS10170	COG0531	amino acid
HHJ42_RS10175	COG1982	Orn Lys Arg decarboxylase major
HHJ42_RS10185	COG0745	RESPONSE REGULATOR receiver
HHJ42_RS10190	COG2205	protein histidine kinase activity
HHJ42_RS10220	COG3272	Protein of unknown function (DUF1722)
HHJ42_RS10225	COG0415	Belongs to the DNA photolyase family
HHJ42_RS10235	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
HHJ42_RS10240	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
HHJ42_RS10245	COG1984	allophanate hydrolase subunit 2
HHJ42_RS10250	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
HHJ42_RS10260	COG3180	Ammonia monooxygenase
HHJ42_RS10270	COG0372	Belongs to the citrate synthase family
HHJ42_RS10280	COG2009	succinate dehydrogenase
HHJ42_RS10285	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
HHJ42_RS10290	COG1053	succinate dehydrogenase
HHJ42_RS10295	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
HHJ42_RS10300	COG0567	Dehydrogenase, E1 component
HHJ42_RS10305	COG0508	dehydrogenase complex catalyzes the overall conversion of
HHJ42_RS10315	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
HHJ42_RS10330	COG1294	oxidase, subunit
HHJ42_RS10335	COG4890	Cyd operon protein YbgT
HHJ42_RS10340	COG3790	cyd operon protein YbgE
HHJ42_RS10345	COG0824	Thioesterase
HHJ42_RS10350	COG0811	peptide transport
HHJ42_RS10355	COG0848	biopolymer transport protein
HHJ42_RS10360	COG3064	Membrane
HHJ42_RS10370	COG2885	chlorophyll binding
HHJ42_RS10375	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
HHJ42_RS10415	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
HHJ42_RS10420	COG3201	nicotinamide mononucleotide transporter
HHJ42_RS10425	COG1230	cation diffusion facilitator family transporter
HHJ42_RS10435	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
HHJ42_RS10445	COG2017	converts alpha-aldose to the beta-anomer
HHJ42_RS10455	COG1085	galactose-1-phosphate uridylyltransferase
HHJ42_RS10460	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
HHJ42_RS10465	COG1119	ATPase activity
HHJ42_RS10470	COG3585	molybdate ion transport
HHJ42_RS10470	COG2005	Transcriptional regulator
HHJ42_RS10480	COG0725	ABC transporter, periplasmic molybdate-binding protein
HHJ42_RS10485	COG4149	molybdate abc transporter
HHJ42_RS10490	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
HHJ42_RS10495	COG0561	phosphatase activity
HHJ42_RS10505	COG0583	DNA-binding transcription factor activity
HHJ42_RS10510	COG2828	Protein conserved in bacteria
HHJ42_RS10515	COG0471	metal ion transport
HHJ42_RS10520	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
HHJ42_RS10525	COG4677	pectinesterase activity
HHJ42_RS10530	COG1881	PFAM PEBP family protein
HHJ42_RS10540	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
HHJ42_RS10555	COG2226	methyltransferase
HHJ42_RS10560	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
HHJ42_RS10570	COG0391	Required for morphogenesis under gluconeogenic growth conditions
HHJ42_RS10580	COG0521	Mo-molybdopterin cofactor biosynthetic process
HHJ42_RS10590	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
HHJ42_RS10595	COG0314	molybdopterin synthase activity
HHJ42_RS10600	COG0670	Belongs to the BI1 family
HHJ42_RS10610	COG0392	lysyltransferase activity
HHJ42_RS10615	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
HHJ42_RS10620	COG3568	Endonuclease Exonuclease Phosphatase
HHJ42_RS10630	COG0842	Transport permease protein
HHJ42_RS10635	COG0842	Transport permease protein
HHJ42_RS10640	COG1131	(ABC) transporter
HHJ42_RS10650	COG1309	transcriptional regulator
HHJ42_RS10655	COG0513	Belongs to the DEAD box helicase family
HHJ42_RS10665	COG1199	ATP-dependent helicase activity
HHJ42_RS10670	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
HHJ42_RS10685	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
HHJ42_RS10710	COG0668	transmembrane transport
HHJ42_RS10715	COG1126	abc transporter atp-binding protein
HHJ42_RS10720	COG0765	amino acid transport
HHJ42_RS10725	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
HHJ42_RS10735	COG5006	permease, DMT superfamily
HHJ42_RS10745	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
HHJ42_RS10750	COG2194	sulfuric ester hydrolase activity
HHJ42_RS10760	COG1321	iron dependent repressor
HHJ42_RS10765	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
HHJ42_RS10775	COG0488	(ABC) transporter
HHJ42_RS10780	COG0561	phosphatase activity
HHJ42_RS10785	COG1882	Formate acetyltransferase
HHJ42_RS10790	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
HHJ42_RS10795	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
HHJ42_RS10800	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
HHJ42_RS10805	COG0303	'Molybdopterin
HHJ42_RS10810	COG1446	asparaginase
HHJ42_RS10835	COG2200	EAL domain
HHJ42_RS10840	COG2199	diguanylate cyclase activity
HHJ42_RS10855	COG2133	pyrroloquinoline quinone binding
HHJ42_RS10860	COG0625	glutathione transferase activity
HHJ42_RS10865	COG1686	Belongs to the peptidase S11 family
HHJ42_RS10870	COG1349	DNA-binding transcription factor activity
HHJ42_RS10875	COG0671	phosphoesterase, PA-phosphatase related
HHJ42_RS10880	COG2814	Major facilitator Superfamily
HHJ42_RS10890	COG0561	phosphatase activity
HHJ42_RS10895	COG0738	Major facilitator superfamily
HHJ42_RS10900	COG3226	Transcriptional regulator
HHJ42_RS10905	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
HHJ42_RS10945	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
HHJ42_RS10975	COG4695	Portal protein
HHJ42_RS11075	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
HHJ42_RS11085	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
HHJ42_RS11140	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
HHJ42_RS11150	COG0778	Nitroreductase
HHJ42_RS11165	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
HHJ42_RS11170	COG3842	ATPase activity
HHJ42_RS11175	COG1176	ABC-type spermidine putrescine transport system, permease component I
HHJ42_RS11180	COG1177	transmembrane transport
HHJ42_RS11195	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
HHJ42_RS11200	COG4160	amino acid transport
HHJ42_RS11205	COG4215	(ABC) transporter
HHJ42_RS11210	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
HHJ42_RS11215	COG1126	abc transporter atp-binding protein
HHJ42_RS11230	COG3023	N-Acetylmuramoyl-L-alanine amidase
HHJ42_RS11235	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
HHJ42_RS11240	COG0702	epimerase
HHJ42_RS11250	COG0028	Belongs to the TPP enzyme family
HHJ42_RS11255	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
HHJ42_RS11265	COG2431	L-lysine efflux transmembrane transporter activity
HHJ42_RS11275	COG3593	DNA synthesis involved in DNA repair
HHJ42_RS11280	COG2990	Protein conserved in bacteria
HHJ42_RS11285	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
HHJ42_RS11295	COG1278	Cold shock
HHJ42_RS11305	COG0542	response to heat
HHJ42_RS11325	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
HHJ42_RS11330	COG4988	ABC transporter
HHJ42_RS11335	COG0492	ferredoxin-NADP+ reductase activity
HHJ42_RS11340	COG1522	sequence-specific DNA binding
HHJ42_RS11345	COG1674	ftsk spoiiie
HHJ42_RS11345	COG1178	ABC-type Fe3 transport system permease component
HHJ42_RS11355	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
HHJ42_RS11365	COG0243	molybdopterin cofactor binding
HHJ42_RS11370	COG0437	4 iron, 4 sulfur cluster binding
HHJ42_RS11375	COG3302	dmso reductase anchor subunit
HHJ42_RS11380	COG1335	isochorismatase
HHJ42_RS11390	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
HHJ42_RS11395	COG1882	Formate acetyltransferase
HHJ42_RS11400	COG2116	formate transmembrane transporter activity
HHJ42_RS11410	COG2323	membrane
HHJ42_RS11425	COG0501	Belongs to the peptidase M48B family
HHJ42_RS11435	COG0539	negative regulation of cytoplasmic translation
HHJ42_RS11445	COG2333	competence protein COMEC
HHJ42_RS11445	COG0658	competence protein
HHJ42_RS11475	COG3173	Aminoglycoside phosphotransferase
HHJ42_RS11480	COG1434	Gram-negative-bacterium-type cell wall biogenesis
HHJ42_RS11485	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
HHJ42_RS11495	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
HHJ42_RS11505	COG2989	Protein conserved in bacteria
HHJ42_RS11510	COG3108	Peptidase M15
HHJ42_RS11515	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
HHJ42_RS11520	COG1448	Aminotransferase
HHJ42_RS11540	COG0308	aminopeptidase N
HHJ42_RS11550	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
HHJ42_RS11560	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
HHJ42_RS11565	COG0431	NADPH-dependent FMN reductase
HHJ42_RS11580	COG3217	Mosc domain protein beta barrel domain protein
HHJ42_RS11580	COG0633	Ferredoxin
HHJ42_RS11585	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
HHJ42_RS11585	COG0116	Belongs to the methyltransferase superfamily
HHJ42_RS11590	COG0488	(ABC) transporter
HHJ42_RS11595	COG2995	paraquat-inducible protein a
HHJ42_RS11600	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
HHJ42_RS11600	COG3008	intermembrane lipid transfer
HHJ42_RS11605	COG3009	Protein conserved in bacteria
HHJ42_RS11610	COG3130	regulation of translation
HHJ42_RS11620	COG1067	ATP-dependent peptidase activity
HHJ42_RS11630	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
HHJ42_RS11630	COG2885	chlorophyll binding
HHJ42_RS11640	COG3070	regulator of competence-specific genes
HHJ42_RS11645	COG1289	transmembrane transporter activity
HHJ42_RS11650	COG3304	Inner membrane component domain
HHJ42_RS11655	COG0210	DNA helicase
HHJ42_RS11670	COG1832	CoA-binding protein
HHJ42_RS11685	COG1254	Belongs to the acylphosphatase family
HHJ42_RS11690	COG2920	part of a sulfur-relay system
HHJ42_RS11695	COG0670	Belongs to the BI1 family
HHJ42_RS11705	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
HHJ42_RS11715	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
HHJ42_RS11720	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
HHJ42_RS11725	COG1999	signal sequence binding
HHJ42_RS11730	COG1773	rubredoxin
HHJ42_RS11735	COG1271	oxidase subunit
HHJ42_RS11740	COG1294	oxidase, subunit
HHJ42_RS11755	COG1278	Cold shock
HHJ42_RS11760	COG1278	Cold shock
HHJ42_RS11780	COG0348	domain, Protein
HHJ42_RS11785	COG0784	Response regulator, receiver
HHJ42_RS11785	COG2198	Histidine kinase
HHJ42_RS11785	COG2205	protein histidine kinase activity
HHJ42_RS11790	COG1879	ABC-type sugar transport system periplasmic component
HHJ42_RS11795	COG0745	RESPONSE REGULATOR receiver
HHJ42_RS11800	COG3005	denitrification pathway
HHJ42_RS11805	COG0243	molybdopterin cofactor binding
HHJ42_RS11840	COG3729	General stress protein
HHJ42_RS11845	COG2233	PERMEase
HHJ42_RS11850	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
HHJ42_RS11870	COG1335	isochorismatase
HHJ42_RS11880	COG1309	transcriptional regulator
HHJ42_RS11885	COG0506	proline dehydrogenase activity
HHJ42_RS11885	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
HHJ42_RS11885	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
HHJ42_RS11895	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
HHJ42_RS11915	COG1702	phosphate starvation-inducible protein PhoH
HHJ42_RS11920	COG3658	cytochrome
HHJ42_RS11925	COG1215	transferase activity, transferring glycosyl groups
HHJ42_RS11930	COG1649	PFAM Uncharacterised BCR, COG1649
HHJ42_RS11930	COG0726	polysaccharide deacetylase
HHJ42_RS11935	COG0457	Tetratricopeptide repeat
HHJ42_RS11940	COG3706	GGDEF domain
HHJ42_RS11960	COG3381	protein complex oligomerization
HHJ42_RS11970	COG1462	curli production assembly transport component CsgG
HHJ42_RS11985	COG2197	response regulator
HHJ42_RS12010	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
HHJ42_RS12015	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
HHJ42_RS12030	COG2943	transferase activity, transferring hexosyl groups
HHJ42_RS12035	COG5645	(Lipo)protein
HHJ42_RS12050	COG1560	Kdo2-lipid A biosynthetic process
HHJ42_RS12060	COG2353	YceI-like domain
HHJ42_RS12065	COG3038	cytochrome b561
HHJ42_RS12075	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
HHJ42_RS12100	COG2999	glutathione oxidoreductase activity
HHJ42_RS12110	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
HHJ42_RS12120	COG0673	inositol 2-dehydrogenase activity
HHJ42_RS12125	COG0728	peptidoglycan biosynthetic process
HHJ42_RS12130	COG3418	PFAM FlgN family protein
HHJ42_RS12135	COG2747	anti-sigma28 factor FlgM
HHJ42_RS12140	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
HHJ42_RS12145	COG1815	bacterial-type flagellum-dependent cell motility
HHJ42_RS12150	COG1558	bacterial-type flagellum-dependent cell motility
HHJ42_RS12155	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
HHJ42_RS12160	COG1749	Flagellar hook protein flgE
HHJ42_RS12165	COG4787	bacterial-type flagellum-dependent cell motility
HHJ42_RS12170	COG4786	Flagellar basal body rod
HHJ42_RS12185	COG3951	Flagellar rod assembly protein muramidase FlgJ
HHJ42_RS12185	COG1705	Flagellar rod assembly protein muramidase FlgJ
HHJ42_RS12190	COG1256	bacterial-type flagellum assembly
HHJ42_RS12195	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
HHJ42_RS12200	COG1530	ribonuclease E activity
HHJ42_RS12205	COG0564	pseudouridine synthase activity
HHJ42_RS12210	COG0424	maF-like protein
HHJ42_RS12215	COG1399	metal-binding, possibly nucleic acid-binding protein
HHJ42_RS12235	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
HHJ42_RS12240	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ42_RS12250	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
HHJ42_RS12255	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
HHJ42_RS12260	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
HHJ42_RS12270	COG0470	DNA polymerase III
HHJ42_RS12275	COG0084	hydrolase, TatD family'
HHJ42_RS12280	COG1263	PTS System
HHJ42_RS12280	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
HHJ42_RS12285	COG4773	Receptor
HHJ42_RS12290	COG0537	adenosine 5'-monophosphoramidase activity
HHJ42_RS12295	COG5633	Lipoprotein
HHJ42_RS12300	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
HHJ42_RS12320	COG1252	NADH dehydrogenase
HHJ42_RS12325	COG3134	Outer membrane lipoprotein
HHJ42_RS12330	COG1309	transcriptional regulator
HHJ42_RS12340	COG1376	ErfK ybiS ycfS ynhG family protein
HHJ42_RS12340	COG1388	LysM domain
HHJ42_RS12345	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
HHJ42_RS12350	COG4763	Acyl-transferase
HHJ42_RS12355	COG4591	ABC-type transport system involved in lipoprotein release permease component
HHJ42_RS12365	COG4591	ABC-type transport system involved in lipoprotein release permease component
HHJ42_RS12375	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
HHJ42_RS12380	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
HHJ42_RS12390	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
HHJ42_RS12395	COG1177	transmembrane transport
HHJ42_RS12400	COG0582	viral genome integration into host DNA
HHJ42_RS12500	COG1403	HNH endonuclease
HHJ42_RS12505	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
HHJ42_RS12510	COG0484	heat shock protein binding
HHJ42_RS12560	COG3772	lysozyme
HHJ42_RS12590	COG4220	transposase activity
HHJ42_RS12695	COG5301	cellulose 1,4-beta-cellobiosidase activity
HHJ42_RS12740	COG2850	peptidyl-arginine hydroxylation
HHJ42_RS12745	COG2205	protein histidine kinase activity
HHJ42_RS12755	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
HHJ42_RS12775	COG1187	pseudouridine synthase activity
HHJ42_RS12780	COG0538	isocitrate dehydrogenase activity
HHJ42_RS12840	COG1388	LysM domain
HHJ42_RS12840	COG1470	cell adhesion involved in biofilm formation
HHJ42_RS12900	COG5301	cellulose 1,4-beta-cellobiosidase activity
HHJ42_RS12915	COG1108	ABC-type Mn2 Zn2 transport systems permease components
HHJ42_RS12920	COG1108	ABC-type Mn2 Zn2 transport systems permease components
HHJ42_RS12935	COG0538	isocitrate dehydrogenase activity
HHJ42_RS12945	COG5562	phage envelope protein
HHJ42_RS12950	COG0789	Transcriptional regulator
HHJ42_RS12955	COG2200	EAL domain
HHJ42_RS13020	COG2894	cell division
HHJ42_RS13050	COG0179	Fumarylacetoacetate (FAA) hydrolase
HHJ42_RS13065	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
HHJ42_RS13070	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
HHJ42_RS13090	COG2719	SpoVR family
HHJ42_RS13100	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
HHJ42_RS13110	COG1619	proteins homologs of microcin C7 resistance protein MccF
HHJ42_RS13120	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
HHJ42_RS13135	COG0157	Belongs to the NadC ModD family
HHJ42_RS13140	COG0500	methyltransferase
HHJ42_RS13145	COG1120	ATPase activity
HHJ42_RS13170	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ42_RS13170	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
HHJ42_RS13170	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
HHJ42_RS13175	COG1461	Dihydroxyacetone kinase
HHJ42_RS13180	COG2376	Dihydroxyacetone kinase
HHJ42_RS13185	COG3284	Transcriptional regulator
HHJ42_RS13195	COG0012	GTP binding
HHJ42_RS13210	COG0659	secondary active sulfate transmembrane transporter activity
HHJ42_RS13215	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
HHJ42_RS13220	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
HHJ42_RS13240	COG2890	protein-(glutamine-N5) methyltransferase activity
HHJ42_RS13245	COG3094	Invasion gene expression up-regulator, SirB
HHJ42_RS13250	COG2912	Transglutaminase-like superfamily
HHJ42_RS13265	COG0387	Pfam Sodium calcium exchanger
HHJ42_RS13270	COG4572	Cation transport regulator
HHJ42_RS13275	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
HHJ42_RS13280	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
HHJ42_RS13285	COG4932	domain protein
HHJ42_RS13290	COG2197	response regulator
HHJ42_RS13295	COG3850	Histidine kinase
HHJ42_RS13300	COG2223	nitrite transmembrane transporter activity
HHJ42_RS13310	COG1140	nitrate reductase beta subunit
HHJ42_RS13315	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
HHJ42_RS13320	COG2181	nitrate reductase activity
HHJ42_RS13345	COG0788	formyltetrahydrofolate deformylase activity
HHJ42_RS13355	COG1752	Esterase of the alpha-beta hydrolase superfamily
HHJ42_RS13360	COG0745	RESPONSE REGULATOR receiver
HHJ42_RS13365	COG1210	Utp--glucose-1-phosphate uridylyltransferase
HHJ42_RS13375	COG1435	thymidine kinase activity
HHJ42_RS13385	COG1012	belongs to the aldehyde dehydrogenase family
HHJ42_RS13385	COG1454	alcohol dehydrogenase
HHJ42_RS13390	COG2095	MarC family integral membrane protein
HHJ42_RS13400	COG4166	transmembrane transport
HHJ42_RS13405	COG0601	transmembrane transport
HHJ42_RS13410	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
HHJ42_RS13415	COG0444	Belongs to the ABC transporter superfamily
HHJ42_RS13420	COG4608	Belongs to the ABC transporter superfamily
HHJ42_RS13440	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
HHJ42_RS13445	COG2350	Protein conserved in bacteria
HHJ42_RS13455	COG1607	acyl-coa hydrolase
HHJ42_RS13475	COG3047	cAMP biosynthetic process
HHJ42_RS13480	COG0582	viral genome integration into host DNA
HHJ42_RS13550	COG1846	Transcriptional regulator
HHJ42_RS13640	COG1403	HNH endonuclease
HHJ42_RS13645	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
HHJ42_RS13650	COG0484	heat shock protein binding
HHJ42_RS13715	COG3772	lysozyme
HHJ42_RS13860	COG0727	PFAM Uncharacterised protein family (UPF0153)
HHJ42_RS13875	COG0159	tryptophan synthase activity
HHJ42_RS13885	COG0134	indole-3-glycerol-phosphate synthase activity
HHJ42_RS13885	COG0135	phosphoribosylanthranilate isomerase activity
HHJ42_RS13890	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
HHJ42_RS13890	COG0512	Glutamine amidotransferase of anthranilate synthase
HHJ42_RS13895	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
HHJ42_RS13905	COG0613	PHP domain protein
HHJ42_RS13910	COG0009	L-threonylcarbamoyladenylate synthase
HHJ42_RS13915	COG4907	membrane protein (DUF2207)
HHJ42_RS13920	COG1187	pseudouridine synthase activity
HHJ42_RS13925	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
HHJ42_RS13930	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ42_RS13935	COG0616	signal peptide processing
HHJ42_RS13945	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
HHJ42_RS13970	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
HHJ42_RS13980	COG0671	phosphoesterase, PA-phosphatase related
HHJ42_RS13985	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
HHJ42_RS13990	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
HHJ42_RS14000	COG0023	Translation Initiation Factor
HHJ42_RS14010	COG1349	DNA-binding transcription factor activity
HHJ42_RS14020	COG5001	Diguanylate cyclase
HHJ42_RS14035	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
HHJ42_RS14035	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
HHJ42_RS14040	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
HHJ42_RS14050	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
HHJ42_RS14055	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
HHJ42_RS14065	COG2814	Major facilitator Superfamily
HHJ42_RS14070	COG4172	Belongs to the ABC transporter superfamily
HHJ42_RS14075	COG4172	Belongs to the ABC transporter superfamily
HHJ42_RS14080	COG4171	peptide transport system, permease
HHJ42_RS14085	COG4168	peptide transport system, permease
HHJ42_RS14090	COG4166	transmembrane transport
HHJ42_RS14100	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
HHJ42_RS14105	COG1842	Phage shock protein A
HHJ42_RS14115	COG1983	PspC domain protein
HHJ42_RS14125	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
HHJ42_RS14130	COG0366	Alpha amylase catalytic
HHJ42_RS14135	COG1653	transport
HHJ42_RS14140	COG1175	transmembrane transport
HHJ42_RS14145	COG0395	ABC-type sugar transport system, permease component
HHJ42_RS14150	COG1063	alcohol dehydrogenase
HHJ42_RS14155	COG1082	Xylose isomerase domain protein TIM barrel
HHJ42_RS14160	COG0673	inositol 2-dehydrogenase activity
HHJ42_RS14165	COG1554	hydrolase, family 65, central catalytic
HHJ42_RS14170	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
HHJ42_RS14185	COG1609	Transcriptional regulator
HHJ42_RS14190	COG3106	COG3106 Predicted ATPase
HHJ42_RS14200	COG3283	Transcriptional regulator of aromatic amino acids metabolism
HHJ42_RS14205	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
HHJ42_RS14210	COG4948	Mandelate Racemase Muconate Lactonizing
HHJ42_RS14215	COG2866	Carboxypeptidase
HHJ42_RS14220	COG0702	epimerase
HHJ42_RS14230	COG1073	alpha beta
HHJ42_RS14235	COG0583	DNA-binding transcription factor activity
HHJ42_RS14240	COG4166	transmembrane transport
HHJ42_RS14245	COG0668	transmembrane transport
HHJ42_RS14250	COG3182	Iron-regulated membrane protein
HHJ42_RS14255	COG0589	response to stress
HHJ42_RS14260	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
HHJ42_RS14265	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
HHJ42_RS14275	COG2207	Transcriptional regulator
HHJ42_RS14290	COG2840	Smr protein MutS2
HHJ42_RS14295	COG3706	GGDEF domain
HHJ42_RS14305	COG0513	Belongs to the DEAD box helicase family
HHJ42_RS14330	COG0589	response to stress
HHJ42_RS14335	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
HHJ42_RS14340	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
HHJ42_RS14340	COG0674	pyruvate-flavodoxin oxidoreductase activity
HHJ42_RS14340	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
HHJ42_RS14340	COG1013	pyruvate-flavodoxin oxidoreductase activity
HHJ42_RS14345	COG3042	response to heat
HHJ42_RS14350	COG3187	Heat shock protein
HHJ42_RS14355	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
HHJ42_RS14360	COG2911	Protein conserved in bacteria
HHJ42_RS14370	COG3784	Protein of unknown function (DUF1318)
HHJ42_RS14380	COG0667	Aldo Keto reductase
HHJ42_RS14385	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
HHJ42_RS14390	COG4589	Belongs to the CDS family
HHJ42_RS14400	COG0671	phosphoesterase, PA-phosphatase related
HHJ42_RS14400	COG2453	phosphatase
HHJ42_RS14410	COG1643	Atp-dependent helicase
HHJ42_RS14415	COG1434	Gram-negative-bacterium-type cell wall biogenesis
HHJ42_RS14420	COG1012	belongs to the aldehyde dehydrogenase family
HHJ42_RS14425	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
HHJ42_RS14430	COG3038	cytochrome b561
HHJ42_RS14450	COG0583	DNA-binding transcription factor activity
HHJ42_RS14455	COG5383	Protein conserved in bacteria
HHJ42_RS14465	COG2841	Protein conserved in bacteria
HHJ42_RS14470	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
HHJ42_RS14475	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
HHJ42_RS14480	COG1275	C4-dicarboxylate transporter malic acid transport protein
HHJ42_RS14485	COG0500	methyltransferase
HHJ42_RS14495	COG3135	benzoate transporter
HHJ42_RS14500	COG1396	sequence-specific DNA binding
HHJ42_RS14505	COG0826	peptidase U32
HHJ42_RS14520	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
HHJ42_RS14525	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
HHJ42_RS14530	COG3842	ATPase activity
HHJ42_RS14535	COG1176	ABC-type spermidine putrescine transport system, permease component I
HHJ42_RS14540	COG1177	transmembrane transport
HHJ42_RS14565	COG3238	Protein conserved in bacteria
HHJ42_RS14570	COG1247	-acetyltransferase
HHJ42_RS14580	COG4772	TonB-dependent receptor
HHJ42_RS14590	COG1113	amino acid transport
HHJ42_RS14595	COG0625	glutathione transferase activity
HHJ42_RS14600	COG0625	glutathione transferase activity
HHJ42_RS14610	COG3501	Rhs element vgr protein
HHJ42_RS14645	COG3501	Rhs element vgr protein
HHJ42_RS14670	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
HHJ42_RS14675	COG2162	N-hydroxyarylamine O-acetyltransferase activity
HHJ42_RS14680	COG0384	phenazine biosynthesis protein PhzF
HHJ42_RS14685	COG2181	nitrate reductase activity
HHJ42_RS14690	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
HHJ42_RS14695	COG1140	nitrate reductase beta subunit
HHJ42_RS14700	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
HHJ42_RS14705	COG2223	nitrite transmembrane transporter activity
HHJ42_RS14710	COG0697	spore germination
HHJ42_RS14720	COG0437	4 iron, 4 sulfur cluster binding
HHJ42_RS14725	COG2864	formate dehydrogenase
HHJ42_RS14730	COG3093	addiction module antidote protein HigA
HHJ42_RS14740	COG1064	alcohol dehydrogenase
HHJ42_RS14745	COG0281	malic enzyme
HHJ42_RS14760	COG1764	response to oxidative stress
HHJ42_RS14765	COG2202	Pas domain
HHJ42_RS14765	COG2200	EAL domain
HHJ42_RS14765	COG2199	diguanylate cyclase activity
HHJ42_RS14770	COG3706	GGDEF domain
HHJ42_RS14770	COG3706	GGDEF domain
HHJ42_RS14780	COG0531	amino acid
HHJ42_RS14785	COG0076	glutamate decarboxylase activity
HHJ42_RS14800	COG0641	radical SAM
HHJ42_RS14805	COG3119	arylsulfatase activity
HHJ42_RS14825	COG3539	Fimbrial protein
HHJ42_RS14830	COG3539	Fimbrial protein
HHJ42_RS14835	COG3539	Fimbrial protein
HHJ42_RS14840	COG3188	usher protein
HHJ42_RS14850	COG3539	Fimbrial protein
HHJ42_RS14865	COG3781	membrane
HHJ42_RS14875	COG2199	diguanylate cyclase activity
HHJ42_RS14885	COG2066	Belongs to the glutaminase family
HHJ42_RS14890	COG1012	belongs to the aldehyde dehydrogenase family
HHJ42_RS14895	COG0583	DNA-binding transcription factor activity
HHJ42_RS14915	COG1846	Transcriptional regulator
HHJ42_RS14920	COG4977	sequence-specific DNA binding
HHJ42_RS14930	COG2723	6-phospho-beta-galactosidase activity
HHJ42_RS14940	COG1447	Phosphotransferase system cellobiose-specific component IIA
HHJ42_RS14955	COG2188	Transcriptional regulator
HHJ42_RS14960	COG0697	spore germination
HHJ42_RS14965	COG2814	Major facilitator Superfamily
HHJ42_RS14980	COG3706	GGDEF domain
HHJ42_RS14985	COG3111	PFAM Bacterial OB fold (BOF) protein
HHJ42_RS14990	COG0339	signal peptide processing
HHJ42_RS14995	COG4221	oxidoreductase activity
HHJ42_RS15000	COG1802	Transcriptional regulator
HHJ42_RS15015	COG0477	Major facilitator Superfamily
HHJ42_RS15020	COG1063	alcohol dehydrogenase
HHJ42_RS15025	COG4948	Mandelate Racemase Muconate Lactonizing
HHJ42_RS15040	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
HHJ42_RS15055	COG0243	molybdopterin cofactor binding
HHJ42_RS15060	COG0243	molybdopterin cofactor binding
HHJ42_RS15065	COG0437	4 iron, 4 sulfur cluster binding
HHJ42_RS15070	COG3302	dmso reductase anchor subunit
HHJ42_RS15075	COG3381	protein complex oligomerization
HHJ42_RS15085	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
HHJ42_RS15090	COG1940	carbohydrate kinase activity
HHJ42_RS15095	COG0583	DNA-binding transcription factor activity
HHJ42_RS15100	COG2814	Major facilitator Superfamily
HHJ42_RS15115	COG3591	Belongs to the peptidase S1B family
HHJ42_RS15140	COG1802	Transcriptional regulator
HHJ42_RS15140	COG4626	Terminase
HHJ42_RS15255	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
HHJ42_RS15260	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
HHJ42_RS15270	COG0531	amino acid
HHJ42_RS15275	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ42_RS15280	COG3136	membrane protein required for alginate biosynthesis
HHJ42_RS15285	COG0745	RESPONSE REGULATOR receiver
HHJ42_RS15290	COG2205	protein histidine kinase activity
HHJ42_RS15300	COG0114	fumarate hydratase activity
HHJ42_RS15305	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
HHJ42_RS15305	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
HHJ42_RS15315	COG5339	Protein conserved in bacteria
HHJ42_RS15330	COG3250	beta-galactosidase activity
HHJ42_RS15335	COG1309	transcriptional regulator
HHJ42_RS15340	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ42_RS15345	COG1609	Transcriptional regulator
HHJ42_RS15350	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
HHJ42_RS15350	COG1263	PTS System
HHJ42_RS15355	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
HHJ42_RS15365	COG0673	inositol 2-dehydrogenase activity
HHJ42_RS15405	COG4659	FMN binding
HHJ42_RS15415	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
HHJ42_RS15420	COG3104	oligopeptide transport
HHJ42_RS15425	COG0625	glutathione transferase activity
HHJ42_RS15445	COG3895	Periplasmic Protein
HHJ42_RS15455	COG3133	Outer membrane lipoprotein
HHJ42_RS15470	COG1566	PFAM secretion protein HlyD family protein
HHJ42_RS15475	COG1289	transmembrane transporter activity
HHJ42_RS15480	COG2032	superoxide dismutase activity
HHJ42_RS15490	COG3313	Fe-S protein
HHJ42_RS15495	COG1309	transcriptional regulator
HHJ42_RS15500	COG1902	pentaerythritol trinitrate reductase activity
HHJ42_RS15505	COG0346	lactoylglutathione lyase activity
HHJ42_RS15515	COG1201	RNA secondary structure unwinding
HHJ42_RS15520	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
HHJ42_RS15525	COG0791	NLP P60 protein
HHJ42_RS15530	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
HHJ42_RS15550	COG0583	DNA-binding transcription factor activity
HHJ42_RS15555	COG2814	Major facilitator Superfamily
HHJ42_RS15560	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
HHJ42_RS15565	COG0307	riboflavin synthase, alpha
HHJ42_RS15575	COG3468	outer membrane autotransporter barrel domain protein
HHJ42_RS15595	COG4529	Protein conserved in bacteria
HHJ42_RS15605	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
HHJ42_RS15610	COG0437	4 iron, 4 sulfur cluster binding
HHJ42_RS15620	COG2414	aldehyde ferredoxin oxidoreductase
HHJ42_RS15625	COG0437	4 iron, 4 sulfur cluster binding
HHJ42_RS15635	COG0469	pyruvate kinase activity
HHJ42_RS15640	COG4238	major outer membrane lipoprotein
HHJ42_RS15645	COG1376	ErfK ybiS ycfS ynhG family protein
HHJ42_RS15660	COG0719	Fe-S assembly protein
HHJ42_RS15665	COG0396	ATPase activity
HHJ42_RS15670	COG0719	Fe-S assembly protein
HHJ42_RS15675	COG0316	Belongs to the HesB IscA family
HHJ42_RS15685	COG2050	protein possibly involved in aromatic compounds catabolism
HHJ42_RS15690	COG0277	FAD linked oxidase domain protein
HHJ42_RS15690	COG0247	lactate metabolic process
HHJ42_RS15695	COG0628	permease
HHJ42_RS15710	COG0738	Major facilitator superfamily
HHJ42_RS15715	COG2271	Major facilitator Superfamily
HHJ42_RS15730	COG4670	ketone body catabolic process
HHJ42_RS15735	COG1960	acyl-CoA dehydrogenase activity
HHJ42_RS15740	COG2207	Transcriptional regulator
HHJ42_RS15740	COG1917	Cupin 2, conserved barrel domain protein
HHJ42_RS15745	COG2086	electron transfer activity
HHJ42_RS15750	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
HHJ42_RS15755	COG0644	oxidoreductase
HHJ42_RS15760	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
HHJ42_RS15765	COG0318	PFAM AMP-dependent synthetase and ligase
HHJ42_RS15770	COG0574	Belongs to the PEP-utilizing enzyme family
HHJ42_RS15770	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
HHJ42_RS15780	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
HHJ42_RS15785	COG4256	Hemin uptake protein
HHJ42_RS15795	COG2200	EAL domain
HHJ42_RS15800	COG0791	NLP P60 protein
HHJ42_RS15810	COG0386	Belongs to the glutathione peroxidase family
HHJ42_RS15870	COG3137	Salt-induced outer membrane protein
HHJ42_RS15875	COG1105	Belongs to the carbohydrate kinase PfkB family
HHJ42_RS15885	COG3001	Fructosamine kinase
HHJ42_RS15895	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
HHJ42_RS15900	COG1988	membrane-bound metal-dependent
HHJ42_RS15915	COG0753	catalase activity
HHJ42_RS15920	COG3394	polysaccharide catabolic process
HHJ42_RS15925	COG1486	melibiose metabolic process
HHJ42_RS15930	COG2169	Transcriptional regulator
HHJ42_RS15930	COG1917	Cupin 2, conserved barrel domain protein
HHJ42_RS15935	COG1447	Phosphotransferase system cellobiose-specific component IIA
HHJ42_RS15940	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
HHJ42_RS15945	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
HHJ42_RS15950	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
HHJ42_RS15960	COG0322	excinuclease ABC activity
HHJ42_RS15970	COG3678	ATP-independent chaperone mediated protein folding
HHJ42_RS16000	COG0708	Exodeoxyribonuclease III
HHJ42_RS16005	COG0398	Pfam SNARE associated Golgi protein
HHJ42_RS16015	COG0398	Pfam SNARE associated Golgi protein
HHJ42_RS16020	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
HHJ42_RS16025	COG4134	Bacterial extracellular solute-binding protein
HHJ42_RS16030	COG4135	transport system, permease component
HHJ42_RS16035	COG4136	ATPase activity
HHJ42_RS16040	COG2897	thiosulfate sulfurtransferase activity
HHJ42_RS16045	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
HHJ42_RS16050	COG0494	nUDIX hydrolase
HHJ42_RS16060	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
HHJ42_RS16070	COG0443	Heat shock 70 kDa protein
HHJ42_RS16075	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
HHJ42_RS16085	COG0778	Nitroreductase
HHJ42_RS16090	COG0616	signal peptide processing
HHJ42_RS16095	COG0252	asparaginase activity
HHJ42_RS16100	COG1335	isochorismatase
HHJ42_RS16105	COG2814	Major facilitator Superfamily
HHJ42_RS16110	COG1349	DNA-binding transcription factor activity
HHJ42_RS16115	COG0667	Aldo Keto reductase
HHJ42_RS16120	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
HHJ42_RS16125	COG0191	fructose-bisphosphate aldolase activity
HHJ42_RS16130	COG1063	alcohol dehydrogenase
HHJ42_RS16135	COG2271	Major facilitator Superfamily
HHJ42_RS16140	COG1063	alcohol dehydrogenase
HHJ42_RS16145	COG3139	Protein of unknown function (DUF1315)
HHJ42_RS16155	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
HHJ42_RS16160	COG0676	glucose-6-phosphate 1-epimerase activity
HHJ42_RS16165	COG0656	L-ascorbic acid biosynthetic process
HHJ42_RS16170	COG3713	MltA-interacting MipA family protein
HHJ42_RS16175	COG2766	serine protein kinase
HHJ42_RS16195	COG2199	diguanylate cyclase activity
HHJ42_RS16200	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
HHJ42_RS16215	COG2207	Transcriptional regulator
HHJ42_RS16220	COG2807	transmembrane transport
HHJ42_RS16225	COG3189	MarR family transcriptional regulator
HHJ42_RS16230	COG3042	response to heat
HHJ42_RS16235	COG2199	diguanylate cyclase activity
HHJ42_RS16235	COG2203	Gaf domain
HHJ42_RS16250	COG2261	transglycosylase associated protein
HHJ42_RS16260	COG3615	Tellurite resistance protein tehB
HHJ42_RS16270	COG0583	DNA-binding transcription factor activity
HHJ42_RS16275	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
HHJ42_RS16280	COG0318	PFAM AMP-dependent synthetase and ligase
HHJ42_RS16285	COG3065	identical protein binding
HHJ42_RS16290	COG1214	PFAM Peptidase M22, glycoprotease
HHJ42_RS16295	COG1199	ATP-dependent helicase activity
HHJ42_RS16300	COG0251	oxidation-reduction process
HHJ42_RS16315	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
HHJ42_RS16325	COG1760	l-serine dehydratase
HHJ42_RS16330	COG2200	EAL domain
HHJ42_RS16335	COG1253	flavin adenine dinucleotide binding
HHJ42_RS16340	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ42_RS16340	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
HHJ42_RS16345	COG3715	PTS system
HHJ42_RS16350	COG3716	PTS system mannose fructose sorbose family IID component
HHJ42_RS16365	COG2226	methyltransferase
HHJ42_RS16395	COG1414	Transcriptional regulator
HHJ42_RS16400	COG2814	Major facilitator Superfamily
HHJ42_RS16410	COG0793	Belongs to the peptidase S41A family
HHJ42_RS16420	COG1956	GAF domain-containing protein
HHJ42_RS16425	COG2995	paraquat-inducible protein a
HHJ42_RS16430	COG3008	intermembrane lipid transfer
HHJ42_RS16450	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
HHJ42_RS16460	COG1276	copper resistance
HHJ42_RS16465	COG2372	response to copper ion
HHJ42_RS16475	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
HHJ42_RS16480	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
HHJ42_RS16485	COG1770	oligopeptidase
HHJ42_RS16490	COG2979	Protein of unknown function (DUF533)
HHJ42_RS16500	COG3141	response to X-ray
HHJ42_RS16510	COG0800	Aldolase
HHJ42_RS16515	COG0129	dihydroxy-acid dehydratase activity
HHJ42_RS16520	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
HHJ42_RS16525	COG1737	Transcriptional regulator
HHJ42_RS16530	COG0469	pyruvate kinase activity
HHJ42_RS16535	COG1560	Kdo2-lipid A biosynthetic process
HHJ42_RS16540	COG0739	heme binding
HHJ42_RS16545	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
HHJ42_RS16555	COG1108	ABC-type Mn2 Zn2 transport systems permease components
HHJ42_RS16585	COG0217	transcriptional regulatory protein
HHJ42_RS16590	COG0494	nUDIX hydrolase
HHJ42_RS16600	COG1335	isochorismatase
HHJ42_RS16605	COG1801	Protein of unknown function DUF72
HHJ42_RS16610	COG3788	relative of glutathione S-transferase, MAPEG superfamily
HHJ42_RS16630	COG3005	denitrification pathway
HHJ42_RS16640	COG3102	Protein conserved in bacteria
HHJ42_RS16655	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
HHJ42_RS16660	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
HHJ42_RS16665	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
HHJ42_RS16670	COG0745	RESPONSE REGULATOR receiver
HHJ42_RS16680	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
HHJ42_RS16690	COG0840	transmembrane signaling receptor activity
HHJ42_RS16695	COG0835	chemotaxis
HHJ42_RS16700	COG0643	Histidine kinase
HHJ42_RS16700	COG2198	Histidine kinase
HHJ42_RS16705	COG1360	Flagellar Motor Protein
HHJ42_RS16710	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
HHJ42_RS16725	COG0589	response to stress
HHJ42_RS16735	COG1877	trehalose-phosphatase activity
HHJ42_RS16740	COG1172	Belongs to the binding-protein-dependent transport system permease family
HHJ42_RS16750	COG1879	ABC-type sugar transport system periplasmic component
HHJ42_RS16755	COG1528	Iron-storage protein
HHJ42_RS16775	COG1528	Iron-storage protein
HHJ42_RS16785	COG0814	amino acid
HHJ42_RS16790	COG3318	Belongs to the UPF0149 family
HHJ42_RS16790	COG3012	SEC-C Motif Domain Protein
HHJ42_RS16820	COG2197	response regulator
HHJ42_RS16835	COG2197	response regulator
HHJ42_RS16870	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
HHJ42_RS16875	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
HHJ42_RS16880	COG1516	flagellar protein fliS
HHJ42_RS16890	COG0366	Alpha amylase catalytic
HHJ42_RS16900	COG2391	methyltransferase activity
HHJ42_RS16905	COG0425	Belongs to the sulfur carrier protein TusA family
HHJ42_RS16910	COG2135	peptidase activity
HHJ42_RS16925	COG2207	Transcriptional regulator
HHJ42_RS16930	COG1881	PFAM PEBP family protein
HHJ42_RS16935	COG2076	Multidrug Resistance protein
HHJ42_RS16945	COG1766	The M ring may be actively involved in energy transduction
HHJ42_RS16950	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
HHJ42_RS16955	COG1317	bacterial-type flagellum organization
HHJ42_RS16960	COG1157	protein secretion by the type III secretion system
HHJ42_RS16965	COG2882	bacterial-type flagellum organization
HHJ42_RS16970	COG3144	bacterial-type flagellum assembly
HHJ42_RS16975	COG1580	Controls the rotational direction of flagella during chemotaxis
HHJ42_RS16980	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
HHJ42_RS16985	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
HHJ42_RS16990	COG3190	flagellar
HHJ42_RS16995	COG1338	Plays a role in the flagellum-specific transport system
HHJ42_RS17000	COG1987	bacterial-type flagellum assembly
HHJ42_RS17005	COG1684	flagellar biosynthetic protein fliR
HHJ42_RS17010	COG2197	response regulator
HHJ42_RS17030	COG3706	GGDEF domain
HHJ42_RS17035	COG5475	Uncharacterized small protein (DUF2158)
HHJ42_RS17040	COG2354	Protein conserved in bacteria
HHJ42_RS17045	COG0697	spore germination
HHJ42_RS17050	COG3727	T/G mismatch-specific endonuclease activity
HHJ42_RS17055	COG0270	DNA (cytosine-5-)-methyltransferase activity
HHJ42_RS17060	COG1418	mRNA catabolic process
HHJ42_RS17070	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
HHJ42_RS17080	COG2205	protein histidine kinase activity
HHJ42_RS17085	COG0745	RESPONSE REGULATOR receiver
HHJ42_RS17090	COG2351	hydroxyisourate hydrolase activity
HHJ42_RS17105	COG3443	Belongs to the bacterial solute-binding protein 9 family
HHJ42_RS17110	COG0582	viral genome integration into host DNA
HHJ42_RS17295	COG0582	viral genome integration into host DNA
HHJ42_RS17305	COG2814	Major facilitator Superfamily
HHJ42_RS17310	COG1132	(ABC) transporter
HHJ42_RS17345	COG1021	2,3-dihydroxybenzoate-AMP ligase
HHJ42_RS17350	COG4771	TonB-dependent receptor
HHJ42_RS17355	COG2373	Large extracellular alpha-helical protein
HHJ42_RS17355	COG1388	LysM domain
HHJ42_RS17355	COG4932	domain protein
HHJ42_RS17360	COG1470	cell adhesion involved in biofilm formation
HHJ42_RS17360	COG1388	LysM domain
HHJ42_RS17365	COG1388	LysM domain
HHJ42_RS17365	COG1470	cell adhesion involved in biofilm formation
HHJ42_RS17390	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
HHJ42_RS17395	COG0217	transcriptional regulatory protein
HHJ42_RS17405	COG0534	Mate efflux family protein
HHJ42_RS17415	COG0583	DNA-binding transcription factor activity
HHJ42_RS17420	COG0583	DNA-binding transcription factor activity
HHJ42_RS17430	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
HHJ42_RS17435	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ42_RS17440	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
HHJ42_RS17445	COG3775	system Galactitol-specific IIC component
HHJ42_RS17450	COG3414	Phosphotransferase system galactitol-specific IIB component
HHJ42_RS17460	COG1349	DNA-binding transcription factor activity
HHJ42_RS17465	COG0698	ribose 5-phosphate isomerase
HHJ42_RS17470	COG3775	system Galactitol-specific IIC component
HHJ42_RS17475	COG3414	Phosphotransferase system galactitol-specific IIB component
HHJ42_RS17480	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ42_RS17490	COG1376	ErfK ybiS ycfS ynhG family protein
HHJ42_RS17505	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
HHJ42_RS17590	COG1012	belongs to the aldehyde dehydrogenase family
HHJ42_RS17595	COG1454	alcohol dehydrogenase
HHJ42_RS17595	COG1012	belongs to the aldehyde dehydrogenase family
HHJ42_RS17600	COG4656	Part of a membrane complex involved in electron transport
HHJ42_RS17625	COG1289	transmembrane transporter activity
HHJ42_RS17635	COG1686	Belongs to the peptidase S11 family
HHJ42_RS17640	COG2925	Exonuclease
HHJ42_RS17645	COG0531	amino acid
HHJ42_RS17655	COG0583	DNA-binding transcription factor activity
HHJ42_RS17660	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
HHJ42_RS17665	COG4115	mRNA cleavage
HHJ42_RS17670	COG2161	toxin-antitoxin pair type II binding
HHJ42_RS17685	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
HHJ42_RS17695	COG0131	Imidazoleglycerol-phosphate dehydratase
HHJ42_RS17695	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
HHJ42_RS17700	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
HHJ42_RS17715	COG0140	phosphoribosyl-ATP diphosphatase activity
HHJ42_RS17715	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
HHJ42_RS17720	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
HHJ42_RS17725	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
HHJ42_RS17730	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
HHJ42_RS17745	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
HHJ42_RS17750	COG0662	Cupin 2, conserved barrel domain protein
HHJ42_RS17750	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
HHJ42_RS17780	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
HHJ42_RS17785	COG1091	dTDP-4-dehydrorhamnose reductase activity
HHJ42_RS17795	COG1210	Utp--glucose-1-phosphate uridylyltransferase
HHJ42_RS17805	COG0438	transferase activity, transferring glycosyl groups
HHJ42_RS17810	COG2327	Polysaccharide pyruvyl transferase
HHJ42_RS17815	COG2244	polysaccharide biosynthetic process
HHJ42_RS17820	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
HHJ42_RS17825	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
HHJ42_RS17830	COG0662	Cupin 2, conserved barrel domain protein
HHJ42_RS17830	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
HHJ42_RS17835	COG0297	glycogen (starch) synthase activity
HHJ42_RS17840	COG1051	belongs to the nudix hydrolase family
HHJ42_RS17845	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
HHJ42_RS17850	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
HHJ42_RS17855	COG0110	maltose O-acetyltransferase activity
HHJ42_RS17860	COG1216	Glycosyl transferase, family 2
HHJ42_RS17870	COG0438	transferase activity, transferring glycosyl groups
HHJ42_RS17875	COG1045	serine acetyltransferase
HHJ42_RS17880	COG0463	Glycosyl transferase, family 2
HHJ42_RS17885	COG3206	protein involved in exopolysaccharide biosynthesis
HHJ42_RS17885	COG0489	protein tyrosine kinase activity
HHJ42_RS17890	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
HHJ42_RS17895	COG1596	polysaccharide export
HHJ42_RS17905	COG1253	flavin adenine dinucleotide binding
HHJ42_RS17910	COG2982	Protein involved in outer membrane biogenesis
HHJ42_RS17920	COG0572	uridine kinase
HHJ42_RS17925	COG5002	protein histidine kinase activity
HHJ42_RS17925	COG3447	MASE1 domain protein
HHJ42_RS17925	COG5001	Diguanylate cyclase
HHJ42_RS17930	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
HHJ42_RS17935	COG0443	Heat shock 70 kDa protein
HHJ42_RS17940	COG4248	protein with protein kinase and helix-hairpin-helix DNA-binding domains
HHJ42_RS17945	COG0631	protein serine/threonine phosphatase activity
HHJ42_RS17950	COG4245	von Willebrand factor, type A
HHJ42_RS17975	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
HHJ42_RS17985	COG2205	protein histidine kinase activity
HHJ42_RS17990	COG0745	RESPONSE REGULATOR receiver
HHJ42_RS17995	COG3422	double-strand break repair
HHJ42_RS18020	COG1063	alcohol dehydrogenase
HHJ42_RS18025	COG3775	system Galactitol-specific IIC component
HHJ42_RS18030	COG3414	Phosphotransferase system galactitol-specific IIB component
HHJ42_RS18035	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ42_RS18050	COG1830	Aldolase
HHJ42_RS18055	COG2211	Major facilitator Superfamily
HHJ42_RS18060	COG1397	ADP-ribosylglycohydrolase
HHJ42_RS18065	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
HHJ42_RS18070	COG2188	Transcriptional regulator
HHJ42_RS18075	COG3757	hydrolase, family 25
HHJ42_RS18080	COG0351	phosphomethylpyrimidine kinase
HHJ42_RS18100	COG5455	response to cobalt ion
HHJ42_RS18105	COG3539	Fimbrial protein
HHJ42_RS18110	COG3188	usher protein
HHJ42_RS18115	COG3121	Chaperone
HHJ42_RS18120	COG3539	Fimbrial protein
HHJ42_RS18130	COG0489	protein tyrosine kinase activity
HHJ42_RS18140	COG3831	ATPase activity
HHJ42_RS18145	COG3831	ATPase activity
HHJ42_RS18155	COG0714	Associated with various cellular activities
HHJ42_RS18160	COG2425	protein containing a von Willebrand factor type A (vWA) domain
HHJ42_RS18165	COG3552	Protein containing von Willebrand factor type A (VWA) domain
HHJ42_RS18170	COG4715	Zinc finger, swim domain protein
HHJ42_RS18175	COG4808	Protein conserved in bacteria
HHJ42_RS18180	COG4807	Protein conserved in bacteria
HHJ42_RS18185	COG3279	Response regulator of the LytR AlgR family
HHJ42_RS18190	COG3275	phosphorelay sensor kinase activity
HHJ42_RS18195	COG0789	Transcriptional regulator
HHJ42_RS18205	COG1174	glycine betaine transport
HHJ42_RS18210	COG1125	glycine betaine transport
HHJ42_RS18215	COG1174	glycine betaine transport
HHJ42_RS18220	COG1732	Glycine betaine
HHJ42_RS18225	COG1472	Belongs to the glycosyl hydrolase 3 family
HHJ42_RS18230	COG0277	FAD linked oxidase domain protein
HHJ42_RS18235	COG1686	Belongs to the peptidase S11 family
HHJ42_RS18245	COG0586	Pfam SNARE associated Golgi protein
HHJ42_RS18250	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ42_RS18265	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
HHJ42_RS18275	COG1346	cytolysis
HHJ42_RS18285	COG2949	membrane
HHJ42_RS18295	COG0493	'glutamate synthase
HHJ42_RS18300	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
HHJ42_RS18300	COG0167	dihydroorotate dehydrogenase activity
HHJ42_RS18305	COG4211	Belongs to the binding-protein-dependent transport system permease family
HHJ42_RS18315	COG1879	ABC-type sugar transport system periplasmic component
HHJ42_RS18320	COG1609	Transcriptional regulator
HHJ42_RS18325	COG2311	Membrane
HHJ42_RS18340	COG4771	TonB-dependent receptor
HHJ42_RS18345	COG0833	amino acid
HHJ42_RS18350	COG0583	DNA-binding transcription factor activity
HHJ42_RS18355	COG2855	membrane
HHJ42_RS18365	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
HHJ42_RS18365	COG1522	sequence-specific DNA binding
HHJ42_RS18375	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
HHJ42_RS18380	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
HHJ42_RS18385	COG2313	pseudouridylate synthase activity
HHJ42_RS18390	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
HHJ42_RS18395	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
HHJ42_RS18395	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
HHJ42_RS18395	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
HHJ42_RS18400	COG1105	Belongs to the carbohydrate kinase PfkB family
HHJ42_RS18405	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ42_RS18405	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ42_RS18410	COG2814	Major facilitator Superfamily
HHJ42_RS18425	COG0246	Mannitol dehydrogenase
HHJ42_RS18430	COG0523	cobalamin synthesis protein
HHJ42_RS18435	COG0671	phosphoesterase, PA-phosphatase related
HHJ42_RS18440	COG0791	NLP P60 protein
HHJ42_RS18445	COG2200	EAL domain
HHJ42_RS18450	COG4166	transmembrane transport
HHJ42_RS18455	COG4174	ABC transporter (Permease)
HHJ42_RS18460	COG4239	(ABC) transporter, permease
HHJ42_RS18465	COG4172	Belongs to the ABC transporter superfamily
HHJ42_RS18475	COG2814	Major facilitator Superfamily
HHJ42_RS18480	COG1187	pseudouridine synthase activity
HHJ42_RS18485	COG1061	Type III restriction enzyme res subunit
HHJ42_RS18505	COG3083	sulfuric ester hydrolase activity
HHJ42_RS18515	COG3468	outer membrane autotransporter barrel domain protein
HHJ42_RS18520	COG3468	outer membrane autotransporter barrel domain protein
HHJ42_RS18525	COG2197	response regulator
HHJ42_RS18530	COG3088	subunit of a heme lyase
HHJ42_RS18530	COG4235	cytochrome complex assembly
HHJ42_RS18535	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
HHJ42_RS18540	COG1138	Cytochrome C-type biogenesis protein
HHJ42_RS18550	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
HHJ42_RS18555	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
HHJ42_RS18560	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
HHJ42_RS18570	COG3005	denitrification pathway
HHJ42_RS18575	COG3043	anaerobic respiration
HHJ42_RS18580	COG0348	domain, Protein
HHJ42_RS18585	COG0437	4 iron, 4 sulfur cluster binding
HHJ42_RS18595	COG3062	negative regulation of establishment of protein localization
HHJ42_RS18600	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
HHJ42_RS18600	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
HHJ42_RS18615	COG4615	Cyclic peptide transporter
HHJ42_RS18620	COG3145	DNA-N1-methyladenine dioxygenase activity
HHJ42_RS18625	COG2169	Transcriptional regulator
HHJ42_RS18625	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
HHJ42_RS18630	COG1477	protein flavinylation
HHJ42_RS18635	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
HHJ42_RS18640	COG2198	Histidine kinase
HHJ42_RS18640	COG0642	Histidine kinase
HHJ42_RS18645	COG2197	response regulator
HHJ42_RS18650	COG2205	protein histidine kinase activity
HHJ42_RS18650	COG0784	Response regulator, receiver
HHJ42_RS18655	COG3852	Histidine kinase
HHJ42_RS18665	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
HHJ42_RS18670	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
HHJ42_RS18675	COG2031	fatty acid transporter
HHJ42_RS18685	COG4676	Protein conserved in bacteria
HHJ42_RS18690	COG5445	Predicted secreted protein (DUF2300)
HHJ42_RS18695	COG2373	Large extracellular alpha-helical protein
HHJ42_RS18700	COG3234	Protein of unknown function (DUF1175)
HHJ42_RS18705	COG4685	Uncharacterized protein conserved in bacteria (DUF2138)
HHJ42_RS18710	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
HHJ42_RS18720	COG3468	outer membrane autotransporter barrel domain protein
HHJ42_RS18725	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
HHJ42_RS18730	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
HHJ42_RS18735	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
HHJ42_RS18740	COG3642	lipopolysaccharide core region biosynthetic process
HHJ42_RS18750	COG0584	glycerophosphoryl diester phosphodiesterase
HHJ42_RS18755	COG2271	Major facilitator Superfamily
HHJ42_RS18760	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
HHJ42_RS18770	COG0247	lactate metabolic process
HHJ42_RS18775	COG5464	transposase or invertase
HHJ42_RS18790	COG2271	Major facilitator Superfamily
HHJ42_RS18865	COG0318	PFAM AMP-dependent synthetase and ligase
HHJ42_RS18875	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
HHJ42_RS18890	COG1169	isochorismate synthase
HHJ42_RS18895	COG4575	ribosome binding
HHJ42_RS18900	COG2153	protein acetylation
HHJ42_RS18910	COG5160	protein modification by small protein removal
HHJ42_RS18915	COG2234	aminopeptidase activity
HHJ42_RS18930	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
HHJ42_RS18935	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
HHJ42_RS18945	COG0839	Belongs to the complex I subunit 6 family
HHJ42_RS18965	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
HHJ42_RS18970	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
HHJ42_RS18990	COG0583	DNA-binding transcription factor activity
HHJ42_RS18995	COG0436	Aminotransferase
HHJ42_RS19005	COG0471	metal ion transport
HHJ42_RS19005	COG0490	domain, Protein
HHJ42_RS19010	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
HHJ42_RS19025	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
HHJ42_RS19030	COG0857	belongs to the CobB CobQ family
HHJ42_RS19030	COG0280	phosphate acetyltransferase
HHJ42_RS19035	COG1288	antiporter activity
HHJ42_RS19040	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
HHJ42_RS19045	COG0622	Phosphoesterase
HHJ42_RS19050	COG0625	glutathione transferase activity
HHJ42_RS19055	COG0625	glutathione transferase activity
HHJ42_RS19060	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
HHJ42_RS19065	COG1090	epimerase
HHJ42_RS19070	COG5464	transposase or invertase
HHJ42_RS19075	COG4598	ABC transporter
HHJ42_RS19080	COG4160	amino acid transport
HHJ42_RS19085	COG4215	(ABC) transporter
HHJ42_RS19090	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
HHJ42_RS19095	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
HHJ42_RS19100	COG0163	prenyltransferase activity
HHJ42_RS19105	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
HHJ42_RS19110	COG1286	toxin biosynthetic process
HHJ42_RS19115	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
HHJ42_RS19120	COG0285	dihydrofolate synthase activity
HHJ42_RS19130	COG0586	Pfam SNARE associated Golgi protein
HHJ42_RS19140	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
HHJ42_RS19155	COG2814	Major facilitator Superfamily
HHJ42_RS19160	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
HHJ42_RS19175	COG3101	peptidyl-lysine hydroxylation
HHJ42_RS19180	COG0730	response to heat
HHJ42_RS19210	COG3539	Fimbrial protein
HHJ42_RS19215	COG3539	Fimbrial protein
HHJ42_RS19220	COG3539	Fimbrial protein
HHJ42_RS19230	COG3188	usher protein
HHJ42_RS19235	COG3539	Fimbrial protein
HHJ42_RS19240	COG2062	phosphohistidine phosphatase, SixA
HHJ42_RS19255	COG3691	Protein conserved in bacteria
HHJ42_RS19270	COG2116	formate transmembrane transporter activity
HHJ42_RS19310	COG3048	D-serine ammonia-lyase activity
HHJ42_RS19315	COG0477	Major facilitator Superfamily
HHJ42_RS19320	COG1566	PFAM secretion protein HlyD family protein
HHJ42_RS19325	COG2197	response regulator
HHJ42_RS19330	COG2198	Histidine kinase
HHJ42_RS19330	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
HHJ42_RS19330	COG0784	Response regulator, receiver
HHJ42_RS19330	COG2205	protein histidine kinase activity
HHJ42_RS19350	COG0679	Auxin Efflux Carrier
HHJ42_RS19355	COG0028	Belongs to the TPP enzyme family
HHJ42_RS19380	COG1560	Kdo2-lipid A biosynthetic process
HHJ42_RS19390	COG0436	Aminotransferase
HHJ42_RS19395	COG3275	phosphorelay sensor kinase activity
HHJ42_RS19400	COG3279	Response regulator of the LytR AlgR family
HHJ42_RS19405	COG2207	Transcriptional regulator
HHJ42_RS19410	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ42_RS19410	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
HHJ42_RS19410	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ42_RS19415	COG1363	Peptidase, m42
HHJ42_RS19420	COG0006	proline dipeptidase activity
HHJ42_RS19425	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
HHJ42_RS19430	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
HHJ42_RS19440	COG0038	chloride channel
HHJ42_RS19455	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
HHJ42_RS19460	COG2200	EAL domain
HHJ42_RS19460	COG2199	diguanylate cyclase activity
HHJ42_RS19475	COG3415	Transposase
HHJ42_RS19480	COG3415	Transposase
HHJ42_RS19485	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
HHJ42_RS19510	COG0583	DNA-binding transcription factor activity
HHJ42_RS19520	COG2211	Major facilitator Superfamily
HHJ42_RS19525	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
HHJ42_RS19535	COG0583	DNA-binding transcription factor activity
HHJ42_RS19540	COG0385	Bile acid
HHJ42_RS19545	COG3530	Putative quorum-sensing-regulated virulence factor
HHJ42_RS19565	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
HHJ42_RS19570	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ42_RS19575	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
HHJ42_RS19580	COG2190	(PTS) system
HHJ42_RS19595	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
HHJ42_RS19600	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
HHJ42_RS19605	COG4208	sulfate ABC transporter
HHJ42_RS19610	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
HHJ42_RS19615	COG4150	thiosulfate binding
HHJ42_RS19620	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ42_RS19635	COG2837	iron assimilation
HHJ42_RS19655	COG0860	N-Acetylmuramoyl-L-alanine amidase
HHJ42_RS19665	COG2207	Transcriptional regulator
HHJ42_RS19670	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
HHJ42_RS19675	COG4816	utilization protein
HHJ42_RS19685	COG4303	Ethanolamine ammonia lyase large subunit
HHJ42_RS19690	COG4819	ethanolamine utilization protein
HHJ42_RS19695	COG3192	ethanolamine utilization protein
HHJ42_RS19700	COG1454	alcohol dehydrogenase
HHJ42_RS19710	COG1012	belongs to the aldehyde dehydrogenase family
HHJ42_RS19715	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
HHJ42_RS19720	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
HHJ42_RS19725	COG0280	phosphate acetyltransferase
HHJ42_RS19730	COG4812	Cobalamin adenosyltransferase
HHJ42_RS19735	COG4766	ethanolamine catabolic process
HHJ42_RS19740	COG4917	ethanolamine utilization protein
HHJ42_RS19745	COG4810	utilization protein
HHJ42_RS19750	COG0281	malic enzyme
HHJ42_RS19750	COG0280	phosphate acetyltransferase
HHJ42_RS19755	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
HHJ42_RS19760	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
HHJ42_RS19765	COG5342	invasion associated locus B
HHJ42_RS19775	COG0493	'glutamate synthase
HHJ42_RS19775	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
HHJ42_RS19780	COG3850	Histidine kinase
HHJ42_RS19785	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
HHJ42_RS19795	COG1393	Belongs to the ArsC family
HHJ42_RS19810	COG0400	carboxylic ester hydrolase activity
HHJ42_RS19820	COG2321	neutral zinc metallopeptidase
HHJ42_RS19830	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
HHJ42_RS19840	COG2716	regulation of RNA biosynthetic process
HHJ42_RS19845	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
HHJ42_RS19850	COG0628	permease
HHJ42_RS19855	COG4783	chaperone-mediated protein folding
HHJ42_RS19860	COG1393	Belongs to the ArsC family
HHJ42_RS19870	COG2233	PERMEase
HHJ42_RS19885	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
HHJ42_RS19890	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
HHJ42_RS19895	COG0248	Ppx GppA phosphatase
HHJ42_RS19900	COG2200	EAL domain
HHJ42_RS19915	COG3133	Outer membrane lipoprotein
HHJ42_RS19930	COG3179	chitinase
HHJ42_RS19955	COG3561	AntA/AntB antirepressor
HHJ42_RS20075	COG5484	DNA packaging
HHJ42_RS20075	COG3728	DNA packaging
HHJ42_RS20160	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
HHJ42_RS20200	COG0516	GMP reductase activity
HHJ42_RS20200	COG0517	IMP dehydrogenase activity
HHJ42_RS20225	COG1645	bacterial-type flagellum-dependent swarming motility
HHJ42_RS20240	COG2976	Protein conserved in bacteria
HHJ42_RS20270	COG4953	penicillin-binding protein 1C
HHJ42_RS20275	COG2373	Large extracellular alpha-helical protein
HHJ42_RS20280	COG2897	thiosulfate sulfurtransferase activity
HHJ42_RS20295	COG2975	iron-sulfur cluster assembly
HHJ42_RS20300	COG0633	Ferredoxin
HHJ42_RS20320	COG0822	iron-sulfur transferase activity
HHJ42_RS20340	COG0483	inositol monophosphate 1-phosphatase activity
HHJ42_RS20345	COG1073	alpha beta
HHJ42_RS20350	COG3711	transcriptional antiterminator
HHJ42_RS20355	COG2814	Major facilitator Superfamily
HHJ42_RS20360	COG2259	Doxx family
HHJ42_RS20365	COG2017	converts alpha-aldose to the beta-anomer
HHJ42_RS20370	COG1063	alcohol dehydrogenase
HHJ42_RS20375	COG1172	Belongs to the binding-protein-dependent transport system permease family
HHJ42_RS20380	COG1129	ABC transporter
HHJ42_RS20385	COG1879	ABC-type sugar transport system periplasmic component
HHJ42_RS20395	COG1940	carbohydrate kinase activity
HHJ42_RS20405	COG1017	nitric oxide dioxygenase activity
HHJ42_RS20405	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
HHJ42_RS20410	COG0347	Belongs to the P(II) protein family
HHJ42_RS20415	COG2204	response regulator
HHJ42_RS20420	COG3170	Tfp pilus assembly protein FimV
HHJ42_RS20425	COG2205	protein histidine kinase activity
HHJ42_RS20430	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
HHJ42_RS20430	COG0047	phosphoribosylformylglycinamidine synthase activity
HHJ42_RS20440	COG0590	tRNA wobble adenosine to inosine editing
HHJ42_RS20445	COG0560	Phosphoserine phosphatase
HHJ42_RS20450	COG1737	Transcriptional regulator
HHJ42_RS20455	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
HHJ42_RS20470	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
HHJ42_RS20490	COG0681	Belongs to the peptidase S26 family
HHJ42_RS20500	COG3086	response to oxidative stress
HHJ42_RS20505	COG3026	antisigma factor binding
HHJ42_RS20510	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
HHJ42_RS20515	COG1595	DNA-templated transcription, initiation
HHJ42_RS20525	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
HHJ42_RS20535	COG0513	Belongs to the DEAD box helicase family
HHJ42_RS20540	COG0583	DNA-binding transcription factor activity
HHJ42_RS20560	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
HHJ42_RS20565	COG3118	belongs to the thioredoxin family
HHJ42_RS20575	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
HHJ42_RS20575	COG1042	CoA-binding domain protein
HHJ42_RS20575	COG0045	succinate-CoA ligase (ADP-forming) activity
HHJ42_RS20580	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
HHJ42_RS20585	COG5544	Lipoprotein
HHJ42_RS20625	COG0542	response to heat
HHJ42_RS20635	COG0564	pseudouridine synthase activity
HHJ42_RS20640	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
HHJ42_RS20645	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
HHJ42_RS20655	COG1605	Chorismate mutase
HHJ42_RS20655	COG0077	Prephenate dehydratase
HHJ42_RS20660	COG1605	Chorismate mutase
HHJ42_RS20660	COG0287	Prephenate dehydrogenase
HHJ42_RS20665	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
HHJ42_RS20680	COG2199	diguanylate cyclase activity
HHJ42_RS20685	COG2885	chlorophyll binding
HHJ42_RS20710	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
HHJ42_RS20715	COG4137	Cytochrome C assembly protein
HHJ42_RS20720	COG4536	flavin adenine dinucleotide binding
HHJ42_RS20735	COG0497	DNA recombination
HHJ42_RS20740	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
HHJ42_RS20750	COG2867	negative regulation of translational initiation
HHJ42_RS20765	COG0582	viral genome integration into host DNA
HHJ42_RS20830	COG0579	oxidoreductase
HHJ42_RS20835	COG1012	belongs to the aldehyde dehydrogenase family
HHJ42_RS20840	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
HHJ42_RS20845	COG1113	amino acid transport
HHJ42_RS20850	COG1802	Transcriptional regulator
HHJ42_RS20855	COG1652	LysM domain
HHJ42_RS20860	COG0401	homolog of Blt101
HHJ42_RS20865	COG0640	Transcriptional regulator
HHJ42_RS20870	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
HHJ42_RS20890	COG4575	ribosome binding
HHJ42_RS20900	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
HHJ42_RS20905	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
HHJ42_RS20915	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
HHJ42_RS20920	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
HHJ42_RS20925	COG4175	Glycine betaine
HHJ42_RS20930	COG4176	ABC-type proline glycine betaine transport system permease component
HHJ42_RS20935	COG2113	Glycine betaine
HHJ42_RS20940	COG2814	Major facilitator Superfamily
HHJ42_RS20945	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
HHJ42_RS20955	COG1846	Transcriptional regulator
HHJ42_RS20960	COG1566	PFAM secretion protein HlyD family protein
HHJ42_RS20965	COG2814	Major facilitator Superfamily
HHJ42_RS20985	COG1238	metal cluster binding
HHJ42_RS20990	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
HHJ42_RS21020	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
HHJ42_RS21040	COG1546	Belongs to the CinA family
HHJ42_RS21045	COG2951	lytic endotransglycosylase activity
HHJ42_RS21050	COG3730	PTS system glucitol sorbitol-specific
HHJ42_RS21055	COG3732	PTS system glucitol sorbitol-specific
HHJ42_RS21065	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ42_RS21070	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ42_RS21075	COG1349	DNA-binding transcription factor activity
HHJ42_RS21080	COG0517	IMP dehydrogenase activity
HHJ42_RS21080	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
HHJ42_RS21100	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
HHJ42_RS21105	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
HHJ42_RS21110	COG1609	Transcriptional regulator
HHJ42_RS21115	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
HHJ42_RS21115	COG1263	PTS System
HHJ42_RS21120	COG2723	6-phospho-beta-galactosidase activity
HHJ42_RS21125	COG5499	transcription regulator containing HTH domain
HHJ42_RS21135	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
HHJ42_RS21145	COG3260	NADH ubiquinone oxidoreductase 20
HHJ42_RS21150	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
HHJ42_RS21155	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
HHJ42_RS21155	COG3261	NADH dehydrogenase
HHJ42_RS21160	COG0650	Formate hydrogenlyase subunit 4
HHJ42_RS21165	COG0651	ATP synthesis coupled electron transport
HHJ42_RS21170	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
HHJ42_RS21180	COG0375	protein maturation
HHJ42_RS21185	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
HHJ42_RS21190	COG0298	carbon dioxide binding
HHJ42_RS21195	COG0409	Hydrogenase expression formation protein
HHJ42_RS21200	COG0309	Hydrogenase expression formation protein (HypE)
HHJ42_RS21225	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
HHJ42_RS21230	COG1349	DNA-binding transcription factor activity
HHJ42_RS21235	COG2084	Dehydrogenase
HHJ42_RS21240	COG3395	kinase activity
HHJ42_RS21245	COG0235	Class ii aldolase
HHJ42_RS21250	COG3622	Belongs to the hyi family
HHJ42_RS21255	COG2610	gluconate transmembrane transporter activity
HHJ42_RS21270	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
HHJ42_RS21275	COG4942	peptidase
HHJ42_RS21275	COG1388	LysM domain
HHJ42_RS21355	COG0720	synthase
HHJ42_RS21360	COG0644	oxidoreductase
HHJ42_RS21365	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
HHJ42_RS21370	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
HHJ42_RS21375	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
HHJ42_RS21380	COG2086	electron transfer activity
HHJ42_RS21385	COG0477	Major facilitator Superfamily
HHJ42_RS21390	COG0277	FAD linked oxidase domain protein
HHJ42_RS21395	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ42_RS21400	COG2223	nitrite transmembrane transporter activity
HHJ42_RS21405	COG1070	Carbohydrate kinase
HHJ42_RS21435	COG0602	queuosine metabolic process
HHJ42_RS21445	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
HHJ42_RS21455	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
HHJ42_RS21470	COG3956	TIGRFAM MazG family protein
HHJ42_RS21475	COG2337	Toxic component of a toxin-antitoxin (TA) module
HHJ42_RS21480	COG2336	PFAM SpoVT AbrB
HHJ42_RS21485	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
HHJ42_RS21495	COG2205	protein histidine kinase activity
HHJ42_RS21495	COG3850	Histidine kinase
HHJ42_RS21495	COG4999	Histidine kinase
HHJ42_RS21495	COG3437	response regulator, receiver
HHJ42_RS21500	COG4948	Mandelate Racemase Muconate Lactonizing
HHJ42_RS21505	COG4948	Mandelate Racemase Muconate Lactonizing
HHJ42_RS21510	COG2271	Major facilitator Superfamily
HHJ42_RS21515	COG0716	FMN binding
HHJ42_RS21520	COG0564	pseudouridine synthase activity
HHJ42_RS21525	COG3098	single-species biofilm formation
HHJ42_RS21540	COG1611	Belongs to the LOG family
HHJ42_RS21545	COG0814	amino acid
HHJ42_RS21550	COG1760	l-serine dehydratase
HHJ42_RS21560	COG1454	alcohol dehydrogenase
HHJ42_RS21565	COG0235	Class ii aldolase
HHJ42_RS21570	COG0738	Major facilitator superfamily
HHJ42_RS21580	COG1070	Carbohydrate kinase
HHJ42_RS21590	COG1349	DNA-binding transcription factor activity
HHJ42_RS21600	COG2363	Small membrane protein
HHJ42_RS21605	COG0583	DNA-binding transcription factor activity
HHJ42_RS21615	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
HHJ42_RS21620	COG2166	iron-sulfur cluster assembly
HHJ42_RS21625	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
HHJ42_RS21630	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
HHJ42_RS21670	COG2885	chlorophyll binding
HHJ42_RS21775	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
HHJ42_RS21780	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
HHJ42_RS21780	COG1263	PTS System
HHJ42_RS21785	COG3711	transcriptional antiterminator
HHJ42_RS21790	COG0860	N-Acetylmuramoyl-L-alanine amidase
HHJ42_RS21795	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
HHJ42_RS21795	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
HHJ42_RS21800	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
HHJ42_RS21805	COG1074	ATP-dependent DNA helicase activity
HHJ42_RS21810	COG1025	Belongs to the peptidase M16 family
HHJ42_RS21815	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
HHJ42_RS21820	COG4967	type IV pilus modification protein PilV
HHJ42_RS21830	COG4795	General secretion pathway protein
HHJ42_RS21835	COG2165	general secretion pathway protein
HHJ42_RS21850	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
HHJ42_RS21865	COG0861	Integral membrane protein TerC family
HHJ42_RS21875	COG0667	Aldo Keto reductase
HHJ42_RS21890	COG1609	Transcriptional regulator
HHJ42_RS21900	COG0583	DNA-binding transcription factor activity
HHJ42_RS21905	COG1794	racemase activity, acting on amino acids and derivatives
HHJ42_RS21910	COG2814	Major facilitator Superfamily
HHJ42_RS21915	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ42_RS21925	COG0183	Belongs to the thiolase family
HHJ42_RS21930	COG0814	amino acid
HHJ42_RS21940	COG4942	peptidase
HHJ42_RS21950	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
HHJ42_RS21955	COG2080	2 iron, 2 sulfur cluster binding
HHJ42_RS21965	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
HHJ42_RS21970	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
HHJ42_RS21975	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
HHJ42_RS21985	COG0549	Belongs to the carbamate kinase family
HHJ42_RS21990	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
HHJ42_RS21990	COG3608	succinylglutamate desuccinylase aspartoacylase
HHJ42_RS21995	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
HHJ42_RS22000	COG2068	MobA-Related Protein
HHJ42_RS22005	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
HHJ42_RS22005	COG0493	'glutamate synthase
HHJ42_RS22010	COG0402	S-adenosylhomocysteine deaminase activity
HHJ42_RS22015	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
HHJ42_RS22025	COG2233	PERMEase
HHJ42_RS22030	COG0402	S-adenosylhomocysteine deaminase activity
HHJ42_RS22035	COG2252	PERMEase
HHJ42_RS22040	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
HHJ42_RS22050	COG2233	PERMEase
HHJ42_RS22070	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
HHJ42_RS22080	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
HHJ42_RS22085	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
HHJ42_RS22090	COG4974	Belongs to the 'phage' integrase family
HHJ42_RS22095	COG0716	FMN binding
HHJ42_RS22105	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
HHJ42_RS22115	COG1272	protein, Hemolysin III
HHJ42_RS22125	COG2723	6-phospho-beta-galactosidase activity
HHJ42_RS22150	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
HHJ42_RS22155	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
HHJ42_RS22160	COG0006	proline dipeptidase activity
HHJ42_RS22180	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
HHJ42_RS22190	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
HHJ42_RS22215	COG0583	DNA-binding transcription factor activity
HHJ42_RS22220	COG2968	Membrane
HHJ42_RS22225	COG1279	arginine transmembrane transporter activity
HHJ42_RS22230	COG0668	transmembrane transport
HHJ42_RS22235	COG0191	fructose-bisphosphate aldolase activity
HHJ42_RS22270	COG1122	ATPase activity
HHJ42_RS22275	COG1072	(Pantothenic acid kinase))
HHJ42_RS22290	COG1063	alcohol dehydrogenase
HHJ42_RS22295	COG2213	PTS system mannitol-specific
HHJ42_RS22300	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ42_RS22305	COG0330	HflC and HflK could
HHJ42_RS22310	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
HHJ42_RS22315	COG0501	Belongs to the peptidase M48B family
HHJ42_RS22330	COG1166	arginine decarboxylase activity
HHJ42_RS22350	COG2814	Major facilitator Superfamily
HHJ42_RS22365	COG1385	rRNA (uridine-N3-)-methyltransferase activity
HHJ42_RS22370	COG0189	ligase activity
HHJ42_RS22385	COG2805	Type II/IV secretion system protein
HHJ42_RS22390	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
HHJ42_RS22395	COG0762	integral membrane protein
HHJ42_RS22405	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
HHJ42_RS22410	COG0635	Involved in the biosynthesis of porphyrin-containing compound
HHJ42_RS22420	COG0252	asparaginase activity
HHJ42_RS22430	COG3171	Protein conserved in bacteria
HHJ42_RS22440	COG1194	a g-specific adenine glycosylase
HHJ42_RS22455	COG2211	Major facilitator Superfamily
HHJ42_RS22460	COG1982	Orn Lys Arg decarboxylase major
HHJ42_RS22465	COG1811	Na channel or pump
HHJ42_RS22685	COG4771	TonB-dependent receptor
HHJ42_RS22720	COG1132	(ABC) transporter
HHJ42_RS22775	COG2801	Transposase and inactivated derivatives
HHJ42_RS22785	COG3059	membrane
HHJ42_RS22800	COG3039	Transposase
HHJ42_RS22815	COG1982	Orn Lys Arg decarboxylase major
HHJ42_RS22840	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
HHJ42_RS22880	COG0305	Participates in initiation and elongation during chromosome replication
HHJ42_RS22895	COG0582	viral genome integration into host DNA
HHJ42_RS23070	COG4771	TonB-dependent receptor
HHJ42_RS23160	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
HHJ42_RS23175	COG4795	General secretion pathway protein
HHJ42_RS23190	COG2165	general secretion pathway protein
HHJ42_RS23195	COG1459	type II secretion system
HHJ42_RS23200	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
HHJ42_RS23225	COG3064	Membrane
HHJ42_RS23230	COG1620	l-lactate permease
HHJ42_RS23240	COG3193	protein, possibly involved in utilization of glycolate and propanediol
HHJ42_RS23245	COG0247	lactate metabolic process
HHJ42_RS23250	COG0277	FAD linked oxidase domain protein
HHJ42_RS23255	COG0277	FAD linked oxidase domain protein
HHJ42_RS23260	COG2186	Transcriptional regulator
HHJ42_RS23265	COG0456	acetyltransferase
HHJ42_RS23280	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
HHJ42_RS23285	COG0156	8-amino-7-oxononanoate synthase activity
HHJ42_RS23295	COG0795	lipopolysaccharide-transporting ATPase activity
HHJ42_RS23300	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
HHJ42_RS23310	COG2244	polysaccharide biosynthetic process
HHJ42_RS23315	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
HHJ42_RS23320	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
HHJ42_RS23325	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
HHJ42_RS23330	COG0306	phosphate transporter
HHJ42_RS23335	COG0754	glutathionylspermidine amidase activity
HHJ42_RS23340	COG0625	glutathione transferase activity
HHJ42_RS23345	COG0298	carbon dioxide binding
HHJ42_RS23355	COG1773	rubredoxin
HHJ42_RS23360	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
HHJ42_RS23365	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
HHJ42_RS23370	COG5557	Pfam Polysulphide reductase, NrfD
HHJ42_RS23380	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
HHJ42_RS23395	COG0667	Aldo Keto reductase
HHJ42_RS23405	COG1028	Short-chain dehydrogenase reductase Sdr
HHJ42_RS23410	COG0848	biopolymer transport protein
HHJ42_RS23415	COG0811	peptide transport
HHJ42_RS23420	COG0626	cystathionine gamma-synthase activity
HHJ42_RS23425	COG0586	Pfam SNARE associated Golgi protein
HHJ42_RS23430	COG2207	Transcriptional regulator
HHJ42_RS23435	COG1979	alcohol dehydrogenase
HHJ42_RS23440	COG0656	L-ascorbic acid biosynthetic process
HHJ42_RS23450	COG4238	major outer membrane lipoprotein
HHJ42_RS23455	COG1032	radical SAM domain protein
HHJ42_RS23460	COG2186	Transcriptional regulator
HHJ42_RS23465	COG0246	Mannitol dehydrogenase
HHJ42_RS23470	COG1063	alcohol dehydrogenase
HHJ42_RS23475	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
HHJ42_RS23495	COG2132	Multicopper oxidase
HHJ42_RS23500	COG0204	Acyl-transferase
HHJ42_RS23505	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
HHJ42_RS23510	COG4166	transmembrane transport
HHJ42_RS23515	COG2944	sequence-specific DNA binding
HHJ42_RS23525	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
HHJ42_RS23530	COG3111	PFAM Bacterial OB fold (BOF) protein
HHJ42_RS23535	COG0745	RESPONSE REGULATOR receiver
HHJ42_RS23540	COG0642	Histidine kinase
HHJ42_RS23550	COG2249	NAD(P)H dehydrogenase (quinone) activity
HHJ42_RS23555	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
HHJ42_RS23560	COG0187	DNA topoisomerase II activity
HHJ42_RS23565	COG3150	esterase
HHJ42_RS23570	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
HHJ42_RS23575	COG3151	Protein conserved in bacteria
HHJ42_RS23580	COG0494	nUDIX hydrolase
HHJ42_RS23585	COG1538	Outer membrane efflux protein
HHJ42_RS23595	COG0754	glutathionylspermidine amidase activity
HHJ42_RS23600	COG3384	dioxygenase
HHJ42_RS23620	COG2960	long-chain fatty acid transporting porin activity
HHJ42_RS23625	COG3539	Fimbrial protein
HHJ42_RS23630	COG3188	usher protein
HHJ42_RS23635	COG3121	Chaperone
HHJ42_RS23640	COG3539	Fimbrial protein
HHJ42_RS23650	COG1585	Membrane protein implicated in regulation of membrane protease activity
HHJ42_RS23655	COG2268	Band 7 protein
HHJ42_RS23680	COG3025	triphosphatase activity
HHJ42_RS23685	COG4991	sh3 domain protein
HHJ42_RS23700	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
HHJ42_RS23710	COG0583	DNA-binding transcription factor activity
HHJ42_RS23715	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
HHJ42_RS23720	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
HHJ42_RS23725	COG0471	metal ion transport
HHJ42_RS23735	COG0828	Belongs to the bacterial ribosomal protein bS21 family
HHJ42_RS23740	COG0358	DNA primase activity
HHJ42_RS23745	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
HHJ42_RS23760	COG2375	cellular response to nickel ion
HHJ42_RS23765	COG1695	Transcriptional regulator
HHJ42_RS23770	COG0840	transmembrane signaling receptor activity
HHJ42_RS23780	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
HHJ42_RS23785	COG1609	Transcriptional regulator
HHJ42_RS23790	COG3250	beta-galactosidase activity
HHJ42_RS23795	COG2731	YhcH YjgK YiaL family protein
HHJ42_RS23800	COG0531	amino acid
HHJ42_RS23810	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
HHJ42_RS23810	COG3408	Glycogen debranching enzyme
HHJ42_RS23815	COG0446	pyridine nucleotide-disulphide oxidoreductase
HHJ42_RS23815	COG1902	pentaerythritol trinitrate reductase activity
HHJ42_RS23820	COG5499	transcription regulator containing HTH domain
HHJ42_RS23825	COG4680	protein conserved in bacteria
HHJ42_RS23835	COG1451	nucleotide metabolic process
HHJ42_RS23840	COG2949	membrane
HHJ42_RS23845	COG0673	inositol 2-dehydrogenase activity
HHJ42_RS23850	COG0861	Integral membrane protein TerC family
HHJ42_RS23855	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
HHJ42_RS23865	COG2721	sulfolactate sulfo-lyase activity
HHJ42_RS23875	COG2271	Major facilitator Superfamily
HHJ42_RS23880	COG2186	Transcriptional regulator
HHJ42_RS23885	COG0586	Pfam SNARE associated Golgi protein
HHJ42_RS23895	COG1422	Protein of unknown function (DUF1090)
HHJ42_RS23900	COG4575	ribosome binding
HHJ42_RS23905	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
HHJ42_RS23915	COG2259	Doxx family
HHJ42_RS23920	COG0435	Glutathione S-transferase
HHJ42_RS23925	COG3152	Membrane
HHJ42_RS23930	COG3152	Membrane
HHJ42_RS23935	COG0583	DNA-binding transcription factor activity
HHJ42_RS23940	COG1741	Belongs to the pirin family
HHJ42_RS23955	COG0814	amino acid
HHJ42_RS23960	COG1760	l-serine dehydratase
HHJ42_RS23965	COG0251	oxidation-reduction process
HHJ42_RS23970	COG1882	Formate acetyltransferase
HHJ42_RS23975	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
HHJ42_RS23985	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
HHJ42_RS23990	COG0583	DNA-binding transcription factor activity
HHJ42_RS24015	COG1929	Belongs to the glycerate kinase type-1 family
HHJ42_RS24020	COG2084	Dehydrogenase
HHJ42_RS24030	COG2271	Major facilitator Superfamily
HHJ42_RS24035	COG2721	sulfolactate sulfo-lyase activity
HHJ42_RS24040	COG2002	toxin-antitoxin pair type II binding
HHJ42_RS24050	COG1349	DNA-binding transcription factor activity
HHJ42_RS24060	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
HHJ42_RS24070	COG3716	PTS system mannose fructose sorbose family IID component
HHJ42_RS24075	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ42_RS24080	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
HHJ42_RS24085	COG2222	sugar isomerase
HHJ42_RS24095	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
HHJ42_RS24110	COG3716	PTS system mannose fructose sorbose family IID component
HHJ42_RS24115	COG0363	glucosamine-6-phosphate deaminase activity
HHJ42_RS24120	COG3539	Fimbrial protein
HHJ42_RS24125	COG3121	Chaperone
HHJ42_RS24130	COG3188	usher protein
HHJ42_RS24135	COG3539	Fimbrial protein
HHJ42_RS24145	COG3107	peptidoglycan biosynthetic process
HHJ42_RS24160	COG2823	Periplasmic or secreted lipoprotein
HHJ42_RS24165	COG0701	Predicted permease
HHJ42_RS24170	COG0702	epimerase
HHJ42_RS24175	COG0693	protein deglycase activity
HHJ42_RS24190	COG3153	acetyltransferase
HHJ42_RS24195	COG3154	lipid carrier protein
HHJ42_RS24200	COG0826	peptidase U32
HHJ42_RS24205	COG0826	peptidase U32
HHJ42_RS24210	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
HHJ42_RS24215	COG0814	amino acid
HHJ42_RS24220	COG0513	Belongs to the DEAD box helicase family
HHJ42_RS24260	COG0195	Participates in both transcription termination and antitermination
HHJ42_RS24290	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
HHJ42_RS24300	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
HHJ42_RS24305	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
HHJ42_RS24315	COG1534	Rna-binding protein
HHJ42_RS24320	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
HHJ42_RS24325	COG2027	D-alanyl-D-alanine carboxypeptidase
HHJ42_RS24350	COG0142	geranyltranstransferase activity
HHJ42_RS24355	COG3423	Transcriptional regulator
HHJ42_RS24365	COG5007	Belongs to the BolA IbaG family
HHJ42_RS24370	COG3113	response to antibiotic
HHJ42_RS24375	COG2854	intermembrane phospholipid transfer
HHJ42_RS24380	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
HHJ42_RS24385	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
HHJ42_RS24390	COG1127	ABC transporter
HHJ42_RS24395	COG0530	calcium, potassium:sodium antiporter activity
HHJ42_RS24400	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
HHJ42_RS24400	COG0517	IMP dehydrogenase activity
HHJ42_RS24405	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
HHJ42_RS24410	COG3117	lipopolysaccharide transmembrane transporter activity
HHJ42_RS24415	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
HHJ42_RS24420	COG1137	ATPase activity
HHJ42_RS24425	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
HHJ42_RS24430	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
HHJ42_RS24445	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
HHJ42_RS24450	COG0515	serine threonine protein kinase
HHJ42_RS24460	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
HHJ42_RS24465	COG5002	protein histidine kinase activity
HHJ42_RS24465	COG0784	Response regulator, receiver
HHJ42_RS24465	COG2198	Histidine kinase
HHJ42_RS24470	COG1242	4 iron, 4 sulfur cluster binding
HHJ42_RS24475	COG0070	glutamate synthase
HHJ42_RS24475	COG0069	glutamate synthase activity
HHJ42_RS24475	COG0067	glutamate synthase
HHJ42_RS24480	COG0493	'glutamate synthase
HHJ42_RS24485	COG2731	YhcH YjgK YiaL family protein
HHJ42_RS24490	COG1940	carbohydrate kinase activity
HHJ42_RS24515	COG2969	positive regulation of protein catabolic process
HHJ42_RS24520	COG0625	glutathione transferase activity
HHJ42_RS24535	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
HHJ42_RS24540	COG3105	Protein conserved in bacteria
HHJ42_RS24545	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
HHJ42_RS24550	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
HHJ42_RS24570	COG2732	(Barnase) inhibitor
HHJ42_RS24590	COG0583	DNA-binding transcription factor activity
HHJ42_RS24595	COG0312	modulator of DNA gyrase
HHJ42_RS24600	COG3164	Protein of unknown function
HHJ42_RS24605	COG1530	ribonuclease E activity
HHJ42_RS24615	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
HHJ42_RS24620	COG1792	Involved in formation and maintenance of cell shape
HHJ42_RS24625	COG1077	Cell shape determining protein MreB Mrl
HHJ42_RS24630	COG2200	EAL domain
HHJ42_RS24630	COG2199	diguanylate cyclase activity
HHJ42_RS24635	COG0604	alcohol dehydrogenase
HHJ42_RS24645	COG0511	ligase activity, forming carbon-carbon bonds
HHJ42_RS24650	COG0439	Biotin carboxylase
HHJ42_RS24660	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
HHJ42_RS24665	COG1172	Belongs to the binding-protein-dependent transport system permease family
HHJ42_RS24670	COG1129	ABC transporter
HHJ42_RS24675	COG1879	ABC-type sugar transport system periplasmic component
HHJ42_RS24685	COG1349	DNA-binding transcription factor activity
HHJ42_RS24690	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
HHJ42_RS24695	COG3924	membrane
HHJ42_RS24700	COG4145	pantothenate transmembrane transporter activity
HHJ42_RS24710	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
HHJ42_RS24720	COG2189	Belongs to the N(4) N(6)-methyltransferase family
HHJ42_RS24730	COG1309	transcriptional regulator
HHJ42_RS24735	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
HHJ42_RS24740	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
HHJ42_RS24750	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
HHJ42_RS24755	COG4597	amino acid ABC transporter
HHJ42_RS24760	COG0765	amino acid transport
HHJ42_RS24765	COG1126	abc transporter atp-binding protein
HHJ42_RS24820	COG1476	TRANSCRIPTIONal
HHJ42_RS24840	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
HHJ42_RS24865	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
HHJ42_RS24870	COG5301	cellulose 1,4-beta-cellobiosidase activity
HHJ42_RS24955	COG0740	serine-type endopeptidase activity
HHJ42_RS24980	COG1475	DNA binding
HHJ42_RS24990	COG1475	DNA binding
HHJ42_RS24995	COG1475	DNA binding
HHJ42_RS25255	COG4771	TonB-dependent receptor
HHJ42_RS25285	COG3436	PFAM IS66 Orf2 family protein
HHJ42_RS25300	COG3344	reverse transcriptase
HHJ42_RS25365	COG3344	reverse transcriptase
HHJ42_RS25385	COG0577	efflux transmembrane transporter activity
HHJ42_RS25385	COG1136	(ABC) transporter
HHJ42_RS25390	COG0577	efflux transmembrane transporter activity
HHJ42_RS25390	COG1136	(ABC) transporter
HHJ42_RS25395	COG0577	efflux transmembrane transporter activity
HHJ42_RS25395	COG1136	(ABC) transporter
HHJ42_RS25410	COG0672	)-iron permease
HHJ42_RS25415	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
HHJ42_RS25420	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
HHJ42_RS25475	COG5001	Diguanylate cyclase
HHJ42_RS25475	COG3300	MHYT domain
HHJ42_RS25770	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
HHJ42_RS25785	COG0741	lytic transglycosylase activity
HHJ42_RS25840	COG2805	Type II/IV secretion system protein