HHJ42_RS26110 NONE
HHJ42_RS24785    1603 ..    1615 +  -3.3  -3.35798   GGACAACCGTCGCCC                GGCCA ACA TAGCC                TTCTCCGTCCCCCCT  48 25
HHJ42_RS24790    2079 ..    2104 +  -4.5  -2.90212   GGTTGTTTCCCTCTT         CACGACGGACG TTAG CACCCGCCGTG          TGTCTCCCGTGATAA  48 34
HHJ42_RS24795    2901 ..    2916 +  -7.6  -2.65279   ATTCAGTTAATGATA              GTGTGT CGAA ACACAC               TGGGTTTCCCCATTC  57 52
HHJ42_RS24800    3169 ..    3206 +  -6.3  -5.33405   ATTTTTAAAGAGCAA   AACTTCGCAGTGAACCT TTGC AGGTACACTCTGAAGTA    TTTTTATTTAATCAC  95 28
HHJ42_RS26120    3857 ..    3876 +  -2.9  -3.03781   GTCATCCCCACCTTC            CT-CCAGT TTATC ACTGGCAG            TCTCCTTTGAGTTCC  43 13
HHJ42_RS24805    4234 ..    4250 +  -4.4  -3.72695   TACGGCGTGGACTAC              CAGGGT ATCTA ATCCTG              TTTGCTCCCCACGCT  58 73
HHJ42_RS24810 NONE
HHJ42_RS24815 NONE
HHJ42_RS00025    6442 ..    6452 +  -3.2  -3.96327   CACCATGCCAGAAAA                 GGAG TTT TTCC                 TTTCTGATAGAACAT  55 412
HHJ42_RS25135 NONE
HHJ42_RS24830    7692 ..    7703 +  -7.2   -3.6512   TCACGTTATTATTCC                GCCG AAAT CGGC                 TTTCCACATTGTTTA  67 215
HHJ42_RS25155 NONE
         def NONE
HHJ42_RS25160 NONE
         fmt NONE
HHJ42_RS24860 NONE
        rsmB   12787 ..   12801 +  -3.6  -3.35679   ATAACGGGTCGCGAC               TGATGA AAA TTATCA               TTCTGGGTGCCGGCC  49 45
        trkA   14167 ..   14194 + -15.8  -3.89938   CTTTCTTCTTGTAAT        TAATAAGGCGTC TAAT GACGCCTTATTA         TTTCCCTTTGATTAT 100 27
        mscL   14867 ..   14885 +  -3.2  -3.06686   TAAGGGATCATGTAG             TAATGC TTCTATC GCATTA             TCCTTTATCTGCCCT  43 184
HHJ42_RS25170 NONE
HHJ42_RS25175 NONE
HHJ42_RS25180 NONE
HHJ42_RS25185   18570 ..   18588 +  -8.8  -4.05446   ACAAATTTGGCAACT             TCGTCACG CAG CGTGTCGA             TTTGTCCTTCAGACA  77 353
HHJ42_RS25215   23550 ..   23568 +    -6  -5.24531   TTGCTGCCAGGTCTG             CTGCTG CGTTATC CAGCAG             TTTTTTGTCAGCGAT  93 481
HHJ42_RS25230   25041 ..   25061 +  -3.9  -4.25848   GCTTTCATTACATCA            CCGTCTTAG TTA CAAAGGTGG            TTTTAATCGGCAGTT  62 17
HHJ42_RS25235   26050 ..   26073 +  -2.3  -4.08853   CTGACGTACTTTAAA          ATCGCTGTC CAGGTT GTCAGCGAA           TTCTTTGGTGTTCGC  56 154
HHJ42_RS25255 NONE
HHJ42_RS25260   31067 ..   31082 +    -6  -3.91144   TAAGCTAATTGTTTC              GCCGGC AAGC GCCAGC               TTTCTGCGATCTCCC  66 42
        gspC NONE
        gspD   34585 ..   34607 +    -4   -3.8062   CAACAGTCACGCCCC           TGCGCCATCG TCA CGGTGAGGCA           TTCTTATGAGAATTC  56 7
        gspE NONE
        gspF NONE
        gspG NONE
        gspH NONE
        gspI NONE
HHJ42_RS25310 NONE
        gspJ NONE
HHJ42_RS25315 NONE
        gspK NONE
HHJ42_RS25325   40859 ..   40880 +  -2.3  -4.72272   GATATTGCATTCCAG           CGCTATGACA TGC TG-CATGGTG           TTTTTCGTAAACAGA  66 345
        gspM NONE
        gspO   42952 ..   42970 +    -6  -3.05274   TGCGACAAGCTCATT             TCCCAACA GTT TGTTGAGA             TAATTTATAACTTTA  53 483
HHJ42_RS25335 NONE
HHJ42_RS25340   44720 ..   44761 +  -4.4  -4.15788   AACGCGATCACCTTT CACGTACACGGTGGAAGCG GACCA TGCTTTCGCCG-GTTCGTA TTTCTTCCACGGGTT  64 96
HHJ42_RS25345   47139 ..   47156 +  -2.7  -2.73159   AAGTCGTACTGAGAC             AGAAGTT CACG AACTTCC              ATTTCAACCAGTTCC  41 85
        senB   48654 ..   48668 +  -2.1    -4.086   GATTGCAGCTGCGAT              G-TCGC CCGC GCGAAC               TTCTTTGATCTCTTC  56 356
HHJ42_RS25365   51127 ..   51152 +  -5.5  -3.07043   TTTCAAGGTAGCGGT         TGCCGTCAACTG CGG CAGTT-ACGCCA         TCTTGCAATAATAGC  52 75
HHJ42_RS00370   54140 ..   54178 + -14.6  -4.29325   CCGCCACATTATTGA   GGCGTAAAAAAAGCGGGG ATT CCCCGCTTTTTTGTCACC   TTTTCGGTATTAGTG 100 26
HHJ42_RS00395 NONE
HHJ42_RS00400 NONE
HHJ42_RS00405 NONE
HHJ42_RS00410   61788 ..   61806 +  -6.7  -3.38046   GGCAGAGAGATCAAC            CGCACGCG CAAC CGC-TGCG             TCTTTCAGGTCGCGA  61 173
         crp   63040 ..   63074 +   -18  -3.55071   ACTCGTTAATCCCGT     CAGAGTGGCGCGTTAC CTG GTAGCGCGCCATTTTG     TTTCCCCCGATGTGG 100 32
HHJ42_RS25435 NONE
HHJ42_RS00425 NONE
HHJ42_RS25445 NONE
        sul2 NONE
 aph(3'')-Ib NONE
HHJ42_RS25460   68815 ..   68834 +  -6.4  -5.26119   AAAATCGCCCGCTCG            CGGCATAG CCCG CTATGCCA             TTTTATTTTTGAACG  87 453
        tsgA   70049 ..   70076 +  -8.3  -4.43815   CTCATTAATTGTTCA        TGCCGGGCGGC ACTATC GTCGTCCGGCC         TTTTCCTCTCTTACT  84 33
        nirB NONE
        nirD   73208 ..   73241 +  -8.3  -5.16472   CTTCCCTTTTTGCAT     GGTCCTGTAATA-ACC TTC GGTATATTGCAGGACA     TTTTTTAAACTTTTT  93 64
        nirC   74087 ..   74097 +  -2.4  -3.39895   TTTAATCAAACTGAA                 ACGG CTG CCGG                 TTAATTACTAAGGGG  45 11
        merR NONE
        cobA   75503 ..   75520 + -11.3  -4.98531   CATTAATTTAACCAG             GGCCAGA GAAG TCTGGCC              TTTTTCGTTTACAAC 100 35
HHJ42_RS00480   75952 ..   75979 + -15.6  -4.59089   CCGGTTTAATTGCCT        GACGCCCTCGGA GTTA TCCGAGGGCGTA         TTTGTTTCTGCATTC 100 65
HHJ42_RS25620   88218 ..   88236 +  -3.8  -2.84401   ACCAGTACGACGATC             GCTGGGAT CGG GTTTCAGC             TCGTCTTCTGGTTTG  46 6
        umuD NONE
HHJ42_RS25630   90389 ..   90419 +  -3.4  -3.76224   TAGATGAAACACGTT      CAG-CGTAAAAAC ATTACC GCTTTTACGGCTG       TTTACTCACTGGAAA  53 469
HHJ42_RS25665 NONE
HHJ42_RS25670 NONE
        mrcA NONE
HHJ42_RS25680   96387 ..   96400 +  -9.5  -4.82855   TGTTCTGATTAAAAA               GGCGC TTCA GCGCC                TTTTTAAGTTTGCTG  91 3
        igaA   99566 ..   99600 +   -18  -3.39142   TTATCGAATAACACG     TTTGCGCGGCAGGTTA TGC TACCCTGTCGCGCAAA     TTGCTTCACTCTGGA 100 30
        yrfG NONE
        hslR NONE
HHJ42_RS25695 NONE
HHJ42_RS25700 NONE
        hslO  101618 ..  101641 + -16.8  -4.12188   TCATTAATGAGTATG          TCCGGCAGAG AGGA CTCTGCCGGA           TTTTACGACTAATAC 100 34
HHJ42_RS25710 NONE
HHJ42_RS25715 NONE
        pckA  105408 ..  105426 +  -3.1  -3.17146   TGTAATGATTTGAAG             CTGGAGA ATATC TATCCAG             TATCTTATAGAAAGC  46 36
HHJ42_RS25720  106003 ..  106018 +  -2.6  -2.52543   ATGGCGTTGCACTCT              TCGATA TCTT TATTGA               TCGATTCGGCCAGGT  40 55
HHJ42_RS25725  107059 ..  107075 +  -4.3  -3.02043   CAAACTCACCACTGG              TGAGCGG CAT CGGCTCG              TCTTCGCGGAACATT  49 175
HHJ42_RS25730 NONE
HHJ42_RS25735 NONE
        greB NONE
HHJ42_RS25740 NONE
        pilL NONE
HHJ42_RS00640 NONE
        pilM NONE
        feoA NONE
HHJ42_RS25755 NONE
        feoB NONE
       pilO2 NONE
        feoC NONE
        pilP NONE
        rpnA NONE
        tadA NONE
        gntX NONE
HHJ42_RS25775 NONE
        nfuA NONE
HHJ42_RS25780 NONE
HHJ42_RS25785 NONE
HHJ42_RS25790 NONE
        gntT  119063 ..  119074 +  -7.2  -3.30124   CTGATGGCCGGATGC                GGCG TGAA CGCC                 TTATCCGGCCTACGA  63 46
HHJ42_RS25810 NONE
HHJ42_RS25815 NONE
HHJ42_RS25820 NONE
HHJ42_RS25825 NONE
        malT  126974 ..  126997 +  -5.3   -3.2779   TGGAGTGTGAGTTTA          GCCGGAT AATACGTCGG ATCCGGC           TTACATCTTTATATC  54 31
        traJ NONE
HHJ42_RS25845  128878 ..  128897 +  -3.5  -3.95219   GCATCGACGTTAACA            GGCGGAT TTTCCC ATGCGCC             TTTATCACGTTTACA  58 18
HHJ42_RS25850 NONE
        rtcR  131538 ..  131550 +  -6.9  -5.12068   GCTCCGCCACTTTGC                GGGCG ATG CGCTC                TTTTTCTTCGGTCTG  90 519
HHJ42_RS25860 NONE
HHJ42_RS25865 NONE
        glpD NONE
        traN NONE
        traO NONE
        traP NONE
        traQ  137917 ..  137936 +  -2.1  -2.71503   ATTTTCCAGTTTTGA            GATGGTA AAACAG TACCAGC             TGAATTGTTGTTAAC  40 65
        traR  138336 ..  138350 +  -4.2  -3.34962   CCATCCATAACTTTA               CCATCA ACA TGAAGG               TTATAGAGTGTCACA  50 29
        traS NONE
        traT  139354 ..  139373 +  -2.9  -3.21276   GCATGAGTGATATCA            TCAGCAA AAGAAC TTGTTGA             TATTATAAACAAAAA  45 11
        traU  142496 ..  142527 +  -5.1   -4.3739   ATGCAGGCATAATAA      CCAGAAGAAGCGG CACAAC CCGTTTCATCTGC       TTTTGTGCCGCCATC  70 19
        traV NONE
        traW  144283 ..  144295 +  -2.7  -2.75712   GCTAATTCCAGAAGG                TTCTT TAG AAGAG                TAATTGAGTGAATAA  41 23
        traX  144925 ..  144963 +    -3  -4.01853   CGGACTGAATACACC   GCTGCCGATTTGCGTCAG CAC CTGATGCAGCTCCTCATC   TTTCTCGTAGTATTC  56 52
HHJ42_RS25925 NONE
        excA  147885 ..  147901 +  -5.8  -3.11634   AACAGACCTTCCATA              CCGTAG GCAAA CTGCGG              TTCGGTGATCTCGCG  53 23
HHJ42_RS25940  149042 ..  149064 +  -7.6  -3.28712   CCCACATCGCGCCAG           TACGGCTCGG CAT CCGGGTCGGA           TTGTACGCAAGAGAG  63 331
HHJ42_RS25945  149714 ..  149733 +  -4.2  -4.32651   ATAATGCGGAACTTA            CCG-CCGAA GTG TACGGCCGG            TTTTGCTCGCTTATT  65 93
        trbA NONE
        trbB NONE
HHJ42_RS25965  155083 ..  155097 +    -5  -3.72576   GACGGGGTCAAGAAT               GATGAT GGC GTCATC               TTTCATGCGCAGAGA  59 365
        yhgN  156203 ..  156234 +    -3  -4.67982   GGGGTAAGGTTCAAA      CAGGTGTTGC ACACAACCAGAC GCGGCACCTG       TTTTATTACCTGAAC  65 34
HHJ42_RS25990 NONE
        yhhY  165509 ..  165525 +  -5.2  -4.65933   CATTCAAAATCGGCA              TACCTT CCTTT AAGGTA              TTTATTTTCCCAATA  75 76
HHJ42_RS00860 NONE
HHJ42_RS00865  167412 ..  167426 +  -2.9   -4.2461   GCCATCTTTTTAGAG               TTTAC CAGCA GTAAA               TTTCTTGATCGAAAT  58 368
HHJ42_RS00875  168351 ..  168364 +  -8.1  -2.62668   AAACGCGGCGCATTG               GTCGC TTCG GCGAC                GTTCATTCCATAATC  59 280
HHJ42_RS00885  170475 ..  170506 + -12.2  -4.17556   CAGATGCAATCCACG      CCCCAGCGCAGCAAC TCT GCCGC-GCGCTGGGG      TTTATTGACGGTATA  95 73
        panM  181570 ..  181588 + -10.3   -2.5785   ATATTAGCAATTTGG             CGGCAAC CCAAA GTTGCCG             ATTAATGATTACTTC  70 186
        rsmD NONE
HHJ42_RS00975  188415 ..  188425 +  -8.2  -3.61268   GTCTGCTCCATTCCT                 CCGC TTT GCGG                 TTTGAAGCTTGCCTC  69 146
HHJ42_RS00985  189434 ..  189453 + -12.2  -3.01984   TCTGATAAAACTTGA            CTCTGGAG TCGA CTCCAGAG             TGTATCCTTCGGTTA  81 36
        zntA  191778 ..  191809 +  -7.2  -2.58249   GCATCGAACTCGTAG      GCATGATAAGACGC GACA GCGTCGCATCAGGC       ATTGTGCACCGTATC  57 108
HHJ42_RS01000 NONE
        dcrB  193743 ..  193770 + -12.7  -5.52384   TTTAAGATGATGAGG        CGGCCTCAGGT ATTTCC ACCGGAGGCCG         TTTTTTTAATCGCCA 100 43
HHJ42_RS01015 NONE
        acpT  196815 ..  196842 +  -7.1  -3.91984   CAGAACAGGTAATCA        GTATGACGAAT ACTTAA AATCGTCATAC         TTATTTCCGCCATCT  70 71
        nikA  198452 ..  198464 +  -2.7  -3.07192   AAACCGGTGAAACCT                TAATG TTG CGTTA                TGTATTACGCCGCTT  43 23
        nikB NONE
        nikC NONE
        nikD NONE
        nikE NONE
        nikR  202216 ..  202230 +  -2.8   -3.1552   AACCCCGTAATCACG               CCATTG TCC CAATCG               TCTTCCTGAATCGCA  45 39
HHJ42_RS01070  208934 ..  208962 + -16.9  -4.68103   ATAATAAAAAAGGCT        TCAGATAAGGCGT TGG ACGCCTTATCTGG        TTTTATTCAGGTTAA 100 37
        pitA  211952 ..  211973 + -13.7  -5.64274   TACGCACCAAAACGA           GCGGGTCAG TTTA CTGGCCCGC            TTTTTTTATGCGTCA 100 44
        uspA  213191 ..  213208 + -14.1  -4.77757   CGACGTGTTCCTGAA             CGCCCGC ATAT GCGGGCG              TTTTGCTTTTTGGCG 100 52
        dtpB  214966 ..  214991 + -20.5  -4.19735   TTATTCTTGCAGAAA         GCGGGGTAGCG TTAT CGCTACCCCGC          TTTACTTTTACACCG 100 41
        rlmJ NONE
        gorA  220279 ..  220305 +   -16  -3.11732   GCGTTAAATGTTAAA         GGGCTAAGAGTA GTG TGCTCTTAGCCC         TTAGCTACGTTTCCG 100 34
        arsC  221225 ..  221238 +  -8.1  -3.30124   ATTTATGTCGGATGC               GACGC TGGC GCGTC                TTATCCGACCTACAA  65 83
         slp  222928 ..  222958 + -12.7  -2.55015   AATAACACCACCGAA       AGATGCAGATGCT TTCTC AGCATCTGCATCA       TGCATTACATCAAAT  81 36
HHJ42_RS01140  224061 ..  224077 +  -4.3  -3.33261   CCACCAGATTGAACG              CCTGTTG GCG CGTCAGG              TTGTGGCGCTTGAGC  51 486
HHJ42_RS01155 NONE
HHJ42_RS01160 NONE
        hutX NONE
        chuY  230807 ..  230827 + -15.4  -2.66316   ACCGGCGTGATCCCC            CGGCGCGG CGTGT CCGCGCCG            TAATGTCGTAACGGA  93 31
HHJ42_RS01175 NONE
HHJ42_RS01180 NONE
        hdeD  234990 ..  235024 + -20.3  -3.28003   TATCCCTATTTCCAC     CTGGATCATAGTCAC ATTAA GTGACTATGATCCAG     TTAATACTCTCTTAG 100 42
        gadE  236462 ..  236480 +  -3.1  -6.02345   CATGCTGGCAGAAAC             TGTTGGC AGAAC GGCAACA             TTTTTTTTGTCGTTG 100 188
        mdtE NONE
HHJ42_RS01220  240945 ..  240978 + -14.8  -3.78953   GTAACGTGTAAATGA     GAGTAAGGTTGAAC GTGAGG GTTCAGCCTTACTC      TTTCCTGCTAACCAT 100 37
        treF  248651 ..  248688 + -12.9  -3.52073   GGCGAACCATAATAT   TTTTACAGCCAGCCG CTAACTTC CTGCTGGCTGTAAAA    TTATCCTCTTCAGGA 100 29
HHJ42_RS01255 NONE
        yhjD  251830 ..  251861 +   -13  -2.78596   CCTGGCTCCCCGTAG      GCCGGATAAGATGC GCCA GCATCGCATCCGGC       TATAATGCGCACATA  85 74
HHJ42_RS01265  253644 ..  253668 + -17.3  -3.45434   TCTAAATCTGTTTAA          TTGCCGGATGT CAG ACATCCGGCAA          TTATCATCACTTCTT 100 173
        kdgK  257793 ..  257828 +  -6.9  -3.26471   CAGCTCATCCATAAA    TACCTGATGGTTGTG CTAACT CATCACCATCAGGCA     TTACTGTACAGGTGG  59 85
        bcsE NONE
        bcsF NONE
        bcsG  277538 ..  277579 +  -7.4  -4.60797   TAGGTTCAAGATTAG CCCCCGTGATATTGTCAGGT GCAT ACCTG-CAACGT-GCGGGGG TTTTCTCTCTCCAGC  82 286
HHJ42_RS01350  279220 ..  279238 +  -7.3   -4.4715   AGTTGATTGAGTAAA             CCGGAGC GCATG GCCCCGG             TTTTGTGAGTTAACG  80 27
HHJ42_RS01375  283897 ..  283931 +  -9.2  -3.30338   CTTTCGCCCAGTCTG     CCTGAATCATCTCCGC CAT GCGGCGAGCATTCGGG     TTATACGGACGTTGT  69 503
         tag NONE
HHJ42_RS01435  297115 ..  297137 + -11.3  -2.66695   TTACCCGCACAGCCA           TTCCCCAGC CGCGA GCTGGGGAG           ATCTTTGGTCAGCAC  73 88
HHJ42_RS01445  300176 ..  300203 + -10.7  -3.82481   CTGTAATCCCTTTCA        TGTCAGGTGAT GCAGAA ATCACCTGGCA         TTCTTCAGTTTTCCT  85 35
        ghrB  301259 ..  301292 + -10.5   -4.2528   AGCCGCGACTGCGTG     GAGTAA-AGCCCGA TAATCGC TCGGGCTTTTACTC     TTTATTGGGTTGCAG  85 40
HHJ42_RS01460  302755 ..  302774 + -13.6  -4.08692   CTTTATTGCTGTTTA            CGGTCCTG ATAA CAGGACCG             TTTTCCAACCGATTA 100 52
        cspA  303250 ..  303269 + -11.4  -6.11392   GCACAGAATCTAAGA            TCCCTGCC ATTT GGCGGGGA             TTTTTTTATTTGTTT 100 54
        wecH  308444 ..  308469 + -10.5  -3.57629   AGTGAGTTAGTAAAA         GCCCGGTTA CATTGGAC TAACCGGGC          TTATGTGAATTATTC  78 31
        xylF  313682 ..  313710 + -12.4   -4.0641   AGCGAGCTGTAAGCG        TTACGCCCCGGC GCGGA GCGGGGGCGTGA        TTTCTCTCCATGCCG 100 29
        xylG NONE
        xylH  316473 ..  316504 + -16.8   -4.7078   TTTGATAAAAATTTT      CTCAAAGCCGGTAA CGTA TTACCGGTTTTGAG       TTTTTGCATGATTCA 100 42
        xylR  317929 ..  317939 +  -3.2  -3.22491   TTGTGAATCATCGCT                 GTGG CAG TCAC                 TTCCTGATCCGCTTT  45 242
        malS  321366 ..  321376 +  -5.4  -2.58544   TGGCAAAGCGACTGA                 TGCA CTG TGCA                 ATTATGACGGTCCAC  50 397
        yiaK NONE
HHJ42_RS01565  325656 ..  325669 +  -2.3  -3.87075   AAGCTCGTGGTTAAA               GTGGC CCTC GCTGC                TTTATAAAAAATGAT  53 5
HHJ42_RS01570 NONE
        yiaM NONE
        yiaN NONE
        yiaO NONE
        lyxK NONE
        ulaD NONE
HHJ42_RS01600  332468 ..  332478 +  -2.4  -3.11962   ATTGAAGCGCGTATG                 CAGG AGG CCGG                 ATTTATATGTTAGAG  42 2
        araD  333191 ..  333219 +  -7.3  -3.59979   AGTAGCCATGCCTGA        GAGTGCCCGGC AATACAC GCCGGGCAGCC        TTTCACATCAGAACA  67 36
HHJ42_RS01660  352366 ..  352378 +  -3.3   -4.7254   TTTGCCGAAATTGGG                CGACA ATT TGCCG                TTTTTGCTCGGGGAT  68 522
        mtlA  356401 ..  356420 + -13.6  -3.64703   CATCCGGCAAAAAGC            CCCTCTCC TCAC GGAGAGGG             TTTGGGTGAGGGAAA 100 462
        mtlD NONE
        mtlR  358626 ..  358640 +  -2.8  -3.06162   TTTAACGCATTAATG               GTTACA ATC TGGAAC               TATTACAATGCCATC  43 431
HHJ42_RS01695  359131 ..  359154 + -11.8  -2.61144   TCTCACCATTTACTC          GCTCCTGC-TG GCA CATGCAGGAGC          CTGTTTCAGAGATCG  79 70
HHJ42_RS01700  360330 ..  360342 +  -5.5  -2.68942   AAAACAAAAAATAAA                TGCAG CTT CTGCG                CTTATATCAAGGAAT  50 27
HHJ42_RS01705  365114 ..  365139 + -14.1  -5.10665   AGATCAACAATCTGA         GGGCAATTCTC TGAT GGGAATTGCCC          TTTTCTTTATTACCT 100 172
        lldP NONE
        lldR NONE
        lldD  369021 ..  369043 +   -12  -2.79302   CGAATATCTGCTATC           CTGCCCCC GCACTAA GGGGGCAG           TATGCTAAACATCGT  79 49
        trmL  369586 ..  369603 +  -5.6  -3.18681   TGTCAGATCCCATCA             CCATAC TCAAAC GTATGG              TTAATGCCGTTGAAA  54 93
        gpmM NONE
        envC NONE
HHJ42_RS01765  377116 ..  377154 +  -8.3  -3.00419   GCTTCGTAGGTTATT   TGCTGATGAAATTCCGG ATAAA TCGTAATTTTGTCAGCA   TAATTTCGATTTAAT  62 250
        rfaD NONE
        rfaF NONE
        rfaC  383592 ..  383631 + -12.5  -3.30798   TCTTTAATAGATAAT  TTTGAAATAAAATCAGC TTCCTT GCTGATTTTATTTCACA   TATTCATTACTTATC  90 49
        waaA NONE
        coaD  395318 ..  395330 +  -3.4  -3.75863   CCACCAGCTTGTTAT                CCAT CAGCC ATGG                TTTAATCGCCGTTTT  53 396
       coaBC NONE
         dut NONE
        slmA  399738 ..  399763 + -13.3  -2.93853   AGTTGCAGTAATATG         ACGCCGGATGA CTTT TCATCCGGCGA          GTTTCGTTAAACGCC  86 30
HHJ42_RS01900  402221 ..  402245 +  -4.2  -4.72272   TTCAGCCTTCACAAA          TGCCGCCC ACTCAAACA GAGCGGCA          TTTTTCCTCCCCGCA  69 63
        dinD  403424 ..  403436 +  -4.9  -2.69601   AATAGCGATTTCACA                TAACT ACA AGTTA                TCAATTTCCTCTCAC  49 220
HHJ42_RS01910  404160 ..  404185 + -11.9  -3.89354   CAAAACCTGTGATCT         GCTGGGCAG CCAGCCAA CTGCCCAGC          TTCTTGATTTGCGCA  93 45
         gmk  406731 ..  406744 +  -3.1  -3.41913   CATGCCCAGTCATTT               CTTCA CCTG TGGAG                CTTTTTAAGTATGGC  48 56
        rpoZ  407037 ..  407047 +  -2.4  -2.83082   CGTCGTTAATCACAA                 AGCG GGT CGCC                 CTTGTATCTGTTTGA  40 32
        spoT  409475 ..  409485 +    -4  -3.35813   TGATAACGCTGTTGA                 TTTC CGC GAAA                 TTGATTACACTCGCC  50 343
        recG  411944 ..  411965 +   -13  -3.21912   TCGAATGCGTAAAAA           GCGGCGGT GAGAAG ACCGCCGC            TTCATCGGTTAACCG  91 29
        xanP  414930 ..  414950 +  -2.6  -2.72511   GATTGCGCGTAAATC            GTGCATAA CTCCC TTATGTGC            ATTTCACGGGATGGA  41 105
HHJ42_RS01955  417118 ..  417133 +  -3.3  -4.38712   GGAGTCTGCTGATCT              TGTTG GATCTG CAACA               TTTTCTCAGCATACG  62 463
HHJ42_RS02010 NONE
HHJ42_RS02015  429487 ..  429502 +  -4.7  -4.21194   CTGCACCGGACACCA              GCCAT CCATAT ATGGC               TTTTACCTGCTACAA  64 363
HHJ42_RS02020  430312 ..  430332 +  -3.2   -2.9175   TTGATTACTCTACTC           CCTC-ACCG TCAT CGGTAGTGG            TATCCTTAACGTATA  44 121
HHJ42_RS02025  431383 ..  431409 +  -2.4  -4.10144   GGTGATTGATAAGAT         TGCAGAAA TTCCTTCACGT TTTCTGCA         TTCTTATTATCTTCC  56 102
HHJ42_RS02035  432676 ..  432689 +  -2.3  -4.45765   GACCAACGCTTCTTT               ACCTG ATAT CAGGA                TTTCTTCATTTTCAC  61 58
        adeD  438138 ..  438156 +    -3  -3.64812   AAGGTGCCTTTAATA             CCATCGGC AGC GCCAATCG             CTTTTTTAGGTACAA  51 298
        emrD  446719 ..  446756 +  -5.6  -3.89346   TAAGCTCACGTCACC   GCAGCATCGTCATC AGCTCCATGG GAGAACGATGCTGC    TTTATCAGATCACGC  63 38
HHJ42_RS02125  452387 ..  452401 +  -3.4   -3.0701   TGGCGTAAGAGAGCG               CCGCCG CAC CGCTGG               TTGGATGAAGATTAT  43 207
HHJ42_RS02145  455822 ..  455853 +  -5.1  -4.28774   CATCCGGCGAGAAAA      CCACGGC-GTCCGC AGAAG GTGGATTGGCGTGG      TTTTCGGTTAAATAC  67 103
HHJ42_RS02185  463786 ..  463814 +   -14   -3.1485   AATTGTTAATCGCTG       CGGGCAAAC-GCA TTCA TGCCGTTTGCCCG        TTCACTGATTAATTC  93 32
HHJ42_RS02220  471798 ..  471814 +  -3.6  -4.22652   CGTATAATCCTCCAC              CCGGCG CGCCA TGCTGG              TTTTCACTGGTGTGA  60 34
        rpmH  472135 ..  472148 +  -2.3  -3.93695   TCGTGCTAAAGGCCG               CGCTC GTCT GACCG                TTTCTAAGTAATAAA  53 1
        rnpA NONE
        yidD NONE
        yidC  474431 ..  474448 + -12.7  -5.83211   TTTCGCTAAAATAAG             GGCGGTC AGTT GACCGCC              TTTTTTCTTTTCGTA 100 51
        mnmE  475884 ..  475919 + -21.4  -3.53712   TAAGTAACCGCGCTT    GCGAAGCCGCATTCTGA CTG TCAGA-TGCGGCTTCGC    TTCATTGTTAGCACT 100 34
        tnaC  476229 ..  476246 +  -2.1  -4.55209   CAGAGCCAAACCGAT             TAGATTCA ATG TGA-TCTA             TTTGTTTGCTATATC  61 63
        tnaA  477840 ..  477866 +  -8.1  -3.06492   TAATTAAAACACTCA         GAGTGGCTA TAAGGATGT TAGCCACTC         TATTACCCTACATCC  62 38
        tnaB  479176 ..  479198 + -13.5  -3.12351   GGCTAAATCCTTCAG           GAAGCCAGC CATTC GCTGGCTTC           TTGCCTGTCAGGAAA  87 35
        mdtL NONE
        yidZ  481513 ..  481524 +    -3  -3.44124   CTGTCCATCATTCCA                GTAA ATGA TTAC                 TCTTGTATTCATAAT  48 131
HHJ42_RS02275 NONE
        yieF  482910 ..  482934 + -12.2  -4.57837   GATCTAAATAAAAAA         CCCGCCA-GCA ATCA TGCATGGCGGG          TTTTTAACGCGCTAT 100 34
        yieH NONE
HHJ42_RS02295  485706 ..  485733 +  -7.7  -4.44355   AAATGTTGGAGAACA        GGCCGGA-GCGT AATTC ACACATCCGGCC        TTATTTTTAAGCTTA  79 67
        asnA  515357 ..  515369 +  -4.1  -3.09516   CATCAAACCATTCCC                TGCTT TGC AAGCG                TTCCATAATGGCGCG  46 257
         kup  520170 ..  520194 +  -9.3  -5.50723   AAATCTAACGCCAGA          CGCCTCCTT TCTCCAT AAGGGGGCG          TTTTTGTTTTCATGG 100 33
        rbsD  520730 ..  520764 +  -5.6  -3.37612   GAATATCATTCTCTG     TGCTGGCGTGACGTTC TGA GGCCGTCATGGAAGCA     TTACTTCAGCTTAAA  56 7
        rbsA NONE
        rbsC NONE
        rbsB  524229 ..  524251 + -13.4  -3.22906   AGAAAAGCAGGGCAC           GCGCCACCCT AAC ACGGTGGCGC           ATTTTATGGACATCC  91 108
        rbsK NONE
        rbsR  526420 ..  526430 +  -4.6   -3.4252   CCAGAACACTGTTAC                 CGCT GCT GGCG                 TTGTCATCGGTCAGA  53 248
HHJ42_RS02490 NONE
HHJ42_RS02495  530519 ..  530554 +    -7  -4.00532   AGTCACCTGCCTTAA    TATCTCAAAACTCATC TTCG GGTGATGTTTGAGATA     TTTGCTCTTTAAAAA  68 61
HHJ42_RS02500  533641 ..  533655 +  -2.7  -3.14211   TACAGATTAGATTAA               CCGGC GACAA GCGGG               TTAATGAAACAGAAT  45 76
         rrf  533807 ..  533821 +   -10  -2.82742   AAATTTAGCAGTAAG               CCGGTT ATA AACCGG               TGGTTGTAAAAGAAT  71 44
HHJ42_RS02510  533914 ..  533933 +  -2.8  -2.79684   GAGTCCCGTCCGTTC            CGCCACC CTAATTA GG-GGCG            TAGTTCAATTGGTAG  41 21
HHJ42_RS02515  534010 ..  534029 + -10.8  -6.02914   CCCTGCCAGAAATCA            TCCTTAGC GAAA GCTAAGGA             TTTTTTTTATCTGAA 100 33
        maoP  535401 ..  535413 +  -6.9  -5.72616   GACGATTAATAAAAA                GGGCG AAA TGCCC                TTTTTTTATGTCAGT 100 32
        ilvL  537415 ..  537438 + -13.8  -5.81032   CTTAACGAACTAAGA          CCCCCGCACC GAAA GGTCCGGGGG           TTTTTTTTGACCTTA 100 50
HHJ42_RS02540 NONE
HHJ42_RS02545 NONE
        ilvM NONE
        ilvE  540396 ..  540417 + -11.6  -3.53012   AATAAATACAAAAAA           TGGGACGG CACGCA CCGTCCCA            TTTACGAGACAGACA  85 36
        ilvD NONE
        ilvA  543882 ..  543898 +  -9.4  -4.82901   AGAACGCCTCAATCA              GCGGCT CATGT AGCCGC              TTTTTCTGCACACAC  95 60
        ilvC  546374 ..  546402 + -16.1  -3.24825   ATAGCGATTCAGAGT        TCAAGGCCTTCTC CCG GAGAAGGCCTTGC        TGTTAGTTACGGTAC 100 40
         rep  548858 ..  548884 +  -8.8  -3.79747   AATGCACTTCCAGCG        GCCAGTGGACA TAGCTC TG-CCACTGGC         TTTCCTGATCAATAA  75 89
        trxA  552163 ..  552191 +  -4.5  -3.93038   GGTCAGTTGAAAGAG        TTCCTCGACGCTA ACC TGGCGTAAGGGAA        TTTCATGTTCGGGTG  59 2
        rhoL NONE
         rho  553787 ..  553816 + -13.7  -3.38183   AATTTGTCTTATGCC       AAAAACGCCACGT GTTT ACGTGGCGTTTTG        CTTTTATATCTGTAA 100 40
        wecA NONE
        wzzE  556184 ..  556209 + -18.3  -3.61517   AATAGCAACACTGCT         GCGGTGAGCGC AAAG GCGCTCGCCGC          TTATTCGAAGAGAAT 100 36
        wecB NONE
        wecC NONE
        rffG  559672 ..  559682 +  -3.2  -3.08032   AGGGCGAGCGTTTAG                 GTCT GAA AGGC                 TAATTTTCAGCGGAG  45 12
        rfbA NONE
        rffC NONE
        rffA NONE
        wzxE  563893 ..  563928 +  -6.8   -4.8667   AATCCCAAACTGTGG    CTGGCTCTGCTGAGTG GTGG CATTAAGCCCAGCCAG     TTTTTCTGGCATATC  80 294
        wzyE NONE
        rffM  566809 ..  566834 +  -9.7  -3.18764   TTCCTCTCTTTGTAA         AGCGACGGAGT GGTC ACTTCGTCGCC          TGTCTGCTTTTTTAT  72 43
HHJ42_RS02675 NONE
HHJ42_RS02680  568533 ..  568546 +  -2.3  -3.72695   CTCAGGTTCGAATCC               TGTCG GGCG CGCCA                TTTAGTCCCGGCGCT  51 12
HHJ42_RS02685 NONE
HHJ42_RS02690 NONE
HHJ42_RS02695  568916 ..  568929 +  -9.5  -6.14618   CGACCAATTTTGAAC               CCCGC TTCG GCGGG                TTTTTTTGTTTTCTG 100 35
HHJ42_RS02700  570728 ..  570743 +  -2.5  -4.21462   GATGTCTGGTCCACA              CCATC GATAAA GGTGG               TTTTCGGTACTAAAT  58 465
        cyaA  579764 ..  579799 +  -3.2  -3.01924   AGTATTTTTCGTGAT    GAACGTGCCGGA-AAGC GAG GCTTATCCGGCATGCAA    TCTTAGCGGAAACTA  45 27
HHJ42_RS02750 NONE
        dapF NONE
HHJ42_RS02760 NONE
        xerC NONE
        yigB  586558 ..  586591 +  -8.1  -2.93708   TATATATACCCAGCT     TTTTGGCGGAGG-GCG TTG CGCTTCTCCGCCCAAC     CTATTTTTACGCGGC  61 53
        uvrD  588772 ..  588820 +   -16  -3.34192   CCCGGTTGGAGACGG TGTGACGTTGCGGAATGCGGTG CGCCA CACCGCATTCCGCATCAGCACC TTACTTAGCGCACTT 100 21
        corA  591898 ..  591925 +   -15  -3.72592   GGTTGTAATATAAAT        GCCGGGTAAAGA TTGT TCTTTATCCGGC         TTATTGCTGAAAATT 100 33
        pldA  596085 ..  596106 + -12.3  -5.27335   TTGCAGTTTCTCGCG           CAGGCGCTG AAAA TAGCGCCTG            TTTTTATTTCAGGCA 100 101
        recQ NONE
        rhtC  598671 ..  598700 + -12.1  -3.10175   GCGTCATCAGAGTAA       GTCGGATAAGGCG TTTA CGCCGCATCCGAC        ATTATTTTCACGCAT  81 49
        pldB  600443 ..  600456 +  -2.3  -3.94868   CTCACCCAGCGGAAA               CCGCT CTAC AGAGG                TTTAAATTTCTTATG  53 7
        yigL  601305 ..  601351 +  -6.7  -2.86271   TGTCAACCTGATACT TCGCTACAATGG-ATACTCGTT AATC AAAGAGTTTTCCATTGTGGCGC TACTTATCATCACCA  56 61
        bioP  602574 ..  602598 +    -5  -2.52516   TTCGCCGCCAGTGGA         TG-GTCAGGTG CCAA CACCAGACGCA          CTTCATAATCGAACA  48 355
        metE  605503 ..  605524 + -13.1  -4.19817   ATTGCAGTACGATAA           TGGCTTCCA GTAC TGGAAGCCA            TTTTGCATGAGTGCC 100 64
HHJ42_RS02870 NONE
HHJ42_RS02875 NONE
         tkt  612144 ..  612154 +  -5.4   -3.2511   GAGTGGAGTCGAAGG                 CTTC AAA GAAG                 ATTTTATCGCTGACC  52 189
         udp  623347 ..  623374 +  -6.9   -2.6563   TCTGCTGAAATAAAA        AAACGCTCCCC AACTTC GGGGAGCGATA         TCAGTTATTGACGCC  55 28
        rmuC  630518 ..  630535 +  -2.7  -3.68256   CATCGACGCCCAATC             TGTTACA CTTC TGGAACA              ATTTTTTGATGAGCA  50 78
        ubiE NONE
        ubiJ NONE
        ubiB  633593 ..  633614 +  -2.9  -4.51743   CATCGCTCAAGGCGG           GCCGTGTAA CGTA TAATGCGGC            TTTGTTTAATCATCA  63 47
        tatA  633911 ..  633923 +  -4.1  -3.51436   CGCCACGATAAAGAG                CAGGT GTA ATCTG                TGTTTGATATCGGTT  52 17
        tatB NONE
        tatC  635221 ..  635242 + -15.9  -2.63596   ACTGAAGAATAAATT           CAACCGCCC GTCA GGGCGGTTG            TCATATGGAGTACAG 100 29
        tatD  636438 ..  636459 +  -2.9  -3.61328   AGGGTGATCATCGGT           GCCAGGC AATTCACA GCCTGTC            TTTCGAGGTGTTCCT  51 422
        ubiD  638178 ..  638192 +  -2.7  -4.67651   TTTAACAACGGTAAA               AGCGC CTGAT GCGCG               TTTGTTTTGCCCTAT  65 17
         fre  639124 ..  639137 +  -8.1  -3.30124   TACAGTGCCCGATGC               GACGC TGCC GCGTC                TTATCGGGCCTACAA  65 216
        pepQ  644373 ..  644404 +  -9.4  -3.23853   CGGCGTCGGGGAAAT      TACCGCTGTGGTGG TGCG CTACTACGGCGGCA       TATTGCTTGGCACCG  72 310
        trkH NONE
        hemG  646860 ..  646878 +  -5.8  -3.41229   GAACAACGGCAAACA             CGCCGCCG GGT CAGCGGGG             TTCTCCTGAGAATCT  56 135
HHJ42_RS03055 NONE
HHJ42_RS03060  648805 ..  648836 +  -3.8  -4.20932   TCAAGTCCACTCAGG      CCT-ACCAAATTTGC ACC GCAAATTTGAAGAGG      TTTTAACTACATGTT  62 19
HHJ42_RS03065  648956 ..  648989 +  -6.7  -4.49756   ATTAAATAAAAAATA     CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG      TTTTGCTCTTTAAAA  77 52
HHJ42_RS03070  652081 ..  652095 +  -2.7  -3.14211   TACAGATTAGATTAA               CCGGC GACAA GCGGG               TTAATGAAACAGAAT  45 76
         rrf  652247 ..  652266 + -13.6  -5.17576   CAAATTAAGCGAAGA            GCCCAGTC GGAA GACTGGGC             TTTTTTGCGTTGGTG 100 43
HHJ42_RS03090  653816 ..  653826 +    -4  -4.12188   AATGATATCCTTCAT                 CATT CGT AATG                 TTTTCCGGATGATGG  59 75
        srkA NONE
        dsbA  655493 ..  655512 + -13.6  -6.01369   TGTAAATTACATAAA            GCCCGTGA ATAT TCACGGGC             TTTTTTTATTATTTA 100 46
HHJ42_RS03105  657091 ..  657101 +    -4  -4.26344   CTCATTCAGAGGCGA                 GTAA AAC TTAC                 TTTTCCTGCCGCTGT  62 59
        polA  661404 ..  661429 + -19.1   -5.4505   GCTGAATATTTTAGC         CGCCCCAGTCA GTAA TGACTGGGGCG          TTTTTTATTGGGCGA 100 249
        yihI  663299 ..  663310 +  -3.6  -3.44051   AACGGATTGCCGCCG                TGGG CCTT CCCG                 TTCTGCTGATAACCC  50 39
        hemN  664928 ..  664985 +  -7.9  -3.53811   TTGCCTGATGCGCTA CG-CTTATCAGGCCTGCAAAATCTGT TGAAATT ATTGCTTTTGTAGGCCGGATAAGGCG TTTACGCCGCATCCG  67 106
        typA  671576 ..  671593 + -11.3  -5.81622   TTAGTCATAAAAAAA             CCTGCCA GCGA TGGCAGG              TTTTTTTGCTTTTGT 100 50
        yihV NONE
HHJ42_RS03240 NONE
        yihX NONE
HHJ42_RS03250 NONE
         dtd NONE
        fabY  692972 ..  692990 + -10.4  -4.37886   TTACTTGACTGAAAA             GGTTTTCA ATC TGAAAACC             TTTTCTGGGCCCTGG  87 48
HHJ42_RS03275  694793 ..  694829 +  -9.3  -4.34402   CACCAGCATTCAGAA    CTCCTATGAAAGCGGCA TAG TGCCGCCTGCTCAGGAG    TTTTGCTATGACCCG  85 66
HHJ42_RS03280  695398 ..  695424 + -15.2  -2.62463   CTACTAACAATTAAA         GACCGGTTGGTG CGG CACTGACCGGTC         GTTATGAATGGTAGA  93 34
HHJ42_RS03285  696122 ..  696138 +  -3.6  -3.05046   ATATCTGGAAAACGC              CTCGCG AAATA CGAGAG              ATTTTGCGGGAATAG  45 144
        fdhD  702811 ..  702823 +  -2.7  -5.25154   AAATTACAGGACTTA                TTCAT TTC GTGAA                TTTTGTTATTTTTTT  76 67
HHJ42_RS03320  705164 ..  705195 +  -8.7  -2.71144   CTTCTTCTGATGAAA      G-GGCGGTGCTGGA TATTT TCCGGCACCGCAAC      TCATTAAGGCAGGTA  64 31
        rhaS NONE
        rhaR  711653 ..  711663 +  -6.8  -2.66106   CTCAACACCGTTACC                 GGAC GGC GTCC                 TGCATTGTTCCACTC  52 98
        sodA  713575 ..  713593 + -12.4  -5.67063   AGCTTAAAAAATGAA             CCATCGCC AAC GGCGGTGG             TTTTTTTGTGATCAA 100 83
        kdgT  714783 ..  714806 + -13.2  -4.30448   CCTTAATCCCCACAG          CCGGATGAAC TAAC GTTCGTCCGG           TTTTCAATTGCGTTT 100 49
        yiiM  715651 ..  715662 +  -7.2   -3.4252   TCAAATGCCGGATGC                GGCG TAAA CGCC                 TTATCCTGCCTACAA  65 94
        cpxP  718514 ..  718532 + -14.6  -5.96219   CACCATCCCTGTCTT             CCCCCACA TGA TGTGGGGG             TTTTTTTTATCAATC 100 66
HHJ42_RS03400 NONE
HHJ42_RS03410 NONE
HHJ42_RS03415 NONE
HHJ42_RS03420 NONE
HHJ42_RS03425 NONE
HHJ42_RS03430 NONE
HHJ42_RS03435  724467 ..  724486 +  -5.8   -3.3785   GTTTTTCAAATGTAG            TACTGTGT ATGT ATACAGTA             TTATGGATCAATTGA  56 44
HHJ42_RS03440  725176 ..  725194 +  -2.4  -2.68279   CGTGCATTAGCTGGG             TAACCGTA AGA TATGGATA             TCAATTTAATAGATG  39 23
HHJ42_RS03445  726851 ..  726868 +  -8.4  -5.81032   ATGGGATAACATAAA             CCGCCT CTTTGA AGGCGG              TTTTTTTTGCGCTTG 100 45
HHJ42_RS03460  731053 ..  731063 +  -2.6  -3.53224   GGAAAACCTTCACGA                 TTAA CCC TTAA                 TTTCAGGAAAAACTA  48 59
HHJ42_RS03465 NONE
HHJ42_RS03470 NONE
HHJ42_RS03475 NONE
HHJ42_RS03480 NONE
HHJ42_RS03485 NONE
HHJ42_RS03490 NONE
HHJ42_RS03495 NONE
HHJ42_RS03500 NONE
HHJ42_RS03505 NONE
HHJ42_RS03510 NONE
HHJ42_RS03515  736397 ..  736420 + -15.3  -2.76453   ACCTCATCGTCACAT          TGCCGCCGG TATGAC CCGGCGGCA           TCCTTCCCGTTATGA  93 57
HHJ42_RS03520 NONE
HHJ42_RS03525 NONE
HHJ42_RS03530 NONE
HHJ42_RS03535 NONE
HHJ42_RS03540 NONE
HHJ42_RS03545  742179 ..  742225 +  -4.4  -2.87344   CAGAGTAAAGCCTAA TCTGACAGTCCGCTATGTGCC AGAAGC GG-ACGTTGCGGGACGTCAGA TATCTAAAAAAACTA  48 83
HHJ42_RS03550  743931 ..  743956 + -14.1   -3.3782   TCAGCTCAGTGATAT         CGTCCGCTC-TG TGC CATGAGCGGACG         TTGCTTGCATCGATG 100 177
HHJ42_RS03555  745460 ..  745478 +    -8  -4.87803   GTACAAATCAGGACA             GGCGAGCG AAT TGCCCGCC             TTTTCTTTACCGGTG  86 380
HHJ42_RS03560 NONE
HHJ42_RS03565  747288 ..  747303 +  -4.6  -3.12521   CGGCTGGAGCAACAC              CGCCGA AATA TCGGCC               TGTGATTTTCATCCG  49 5
HHJ42_RS03570 NONE
HHJ42_RS03575 NONE
HHJ42_RS03580 NONE
HHJ42_RS03585 NONE
HHJ42_RS03590  751969 ..  751981 +  -4.1  -3.00946   CGGAAGAGGTGCTCG                CGATG TTT CATTG                TCCTTTATGCCAGCA  47 105
        ogrK  752201 ..  752218 + -12.7  -4.11585   GTGATCACAAAAATA             GCCCCTC AGTC GAGGGGC              TTATTTATGGTCGAT 100 37
        fieF NONE
        pfkA  754656 ..  754672 +  -9.4  -4.72272   TTGTCAGCAATATGA              GGCGGA TTTCT TCCGCC              TTTTTAATCCCCCAA  91 211
         sbp  755802 ..  755824 +  -9.1  -5.72622   AGGATAATTATCAAG           CCCGGTGGT TTCTC GCCACTGGG           TTTTTTATTTGTCAC 100 48
         cdh  756993 ..  757006 +  -2.3  -4.18197   CGCACCTTCGAATGC               CGCAG CACC CTGAG                TTTTCAGTACCGCGT  58 377
HHJ42_RS03630  758739 ..  758786 + -13.8  -2.84566   CTCTTATCGCTATTT TTTTCCGGG-ATTGTTATTTCCA CGA TGCAAGTGACAATGCCCGGAAAA TCCTTCTGAACTCTT  87 53
HHJ42_RS03635 NONE
        uspD  759708 ..  759748 + -10.3  -2.71483   GCTCCGCTGTCATAT  GGCCCGGTCGGCGACGTAA ATG TTTCGTCATCTGCCGGGTC  TCCTTCAGCAACTGT  67 56
        zapB  764814 ..  764829 + -10.4  -5.37345   GTAACGCAGAAAAAA              GGCACC TTGC GGTGCC               TTTTTTATCATTCAA 100 87
        rpmE  773237 ..  773250 +  -9.5  -5.64274   GGATTTCCGAAAAAA               GCGCC GCAC GGCGC                TTTTTTTGTGCCTGA 100 45
        metB NONE
        metL  778156 ..  778181 + -16.3  -3.30124   GTAGTGATTATTGAA         CAAAAGCTGGC AGTT GCCAGCTTTTG          TTGTCACCCCTAAAC 100 37
HHJ42_RS03750  785603 ..  785641 + -12.5  -2.53876   GTTGATTGCGCAGAT  CCTGTATTCGGCCTACGC GAGG GCGCAGGCCGAAT-CAGA   TGCCTTAACATCACC  81 77
        metF  786898 ..  786936 + -10.4  -2.60392   GCTGCCTCGAAATGA   GGGCGGGAAAATAAGGTT ATC AGCCTTGTTTTCTCCCTC   ATTACTTGAAGGATA  70 100
        katG  789342 ..  789374 + -19.3  -4.41616   CTGTAATCTGACCTT      CTTCAGCGACTGCCT TTC ATGCAGTCGCTGAAG      TTTCTTTACCGGCGT 100 35
        yijE  790609 ..  790643 +  -3.5  -3.67989   AGGTTTCCAGATTAG    GCACCC-GACGGTGAT CGAT GTTGCTGTCCGGGCGC     TTTAACTGCCATTTT  53 303
HHJ42_RS03790 NONE
HHJ42_RS03795  797272 ..  797289 + -14.1  -3.27525   CGCTTAAGTTCTTAT             CCCGCCC GCAA GGGCGGG              TTCGCTTTCCCACAG  95 34
HHJ42_RS03800 NONE
HHJ42_RS03805 NONE
HHJ42_RS03810  801289 ..  801313 +  -6.3  -4.52347   AATGCGCGGGCCGCG          TCGGGCGACGT GTT GCTTCGCCAGA          TTTTGATATTGTTTG  74 516
        argC NONE
        argB  809833 ..  809856 +  -5.2  -3.28001   AGCTTAAGTTTTGTT          GGCCGG-AGGC GCA GCTTTCCGGCA          TTGAATTTCAAAATA  54 34
HHJ42_RS03850 NONE
HHJ42_RS03855  814462 ..  814472 +  -2.4  -3.01905   TCAAGGGTTAAAAGA                 GGTG CCG CTCC                 GTTTCTGTGAGCAAT  42 166
        oxyR  815659 ..  815681 +  -5.7  -4.11216   AATACCCAGAATCTC           TTTTGTTTC CCGAT GGAACAAAA           TTTTCAGCGTGCCCA  65 194
HHJ42_RS03870 NONE
HHJ42_RS03875  819763 ..  819776 +  -6.7  -3.22135   CGTTCATTCACAACA               CTGGA GCAA TCCAG                TATGTTCATTCTCTG  59 60
        fabR NONE
HHJ42_RS03885  820847 ..  820878 + -15.2  -4.41494   TGCTGAGTAATCGGT      ATCATGCCGGATGC AAGC GCATCCGGCATGGG       TTTTACTTCGCGGTC 100 31
        btuB NONE
        murI  825102 ..  825120 +  -5.8  -3.41229   GAACAACGGCAAACA             CGCCGCCG GGT CAGCGGGG             TTCTCCTGAGAATCT  56 131
HHJ42_RS03905 NONE
HHJ42_RS03910  827110 ..  827145 +    -7  -4.00532   AGTCACCTGCCTTAA    TATCTCAAAATTCATC TTCG GGTGATGTTTGAGATA     TTTGCTCTTTAAAAA  68 61
HHJ42_RS03915  830231 ..  830245 +  -2.7  -3.14211   TACAGATTAGATTAA               CCGGC GACAA GCGGG               TTAATGAAACAGAAT  45 76
         rrf  830396 ..  830417 + -15.9  -4.73448   TCAAATTAAGCGAAA           GGCCCAGTC GGAA GACTGGGCC            TTTTTGCGTGTCTAT 100 42
        murB NONE
        birA  832511 ..  832528 +  -8.4  -3.89435   CAGAAAAATAAGAAA             GGGGAG CATTAA CTCCCC              TTTAAATTATTTGCG  76 30
HHJ42_RS03940 NONE
HHJ42_RS03945  834071 ..  834091 +  -2.5  -3.05816   GCTTACCGGCTCGAA            TAAAGAGAG CTT CTCTCGATA            TTCAGTGCAGAATGA  43 81
HHJ42_RS03950  834213 ..  834223 +  -3.2  -2.56596   CCCGCTCCAAGATGT                 GCTG ATA TAGC                 TCAGTTGGTAGAGCG  42 32
HHJ42_RS03955  834338 ..  834354 +  -6.5   -3.3071   ATTGCATTCAACAAG              TCGGGCA TGT TGCCTGG              TTGATGTGGTGATAT  59 75
        secE NONE
        nusG  836783 ..  836821 + -16.9   -4.8543   GCGATTTAATCGTTG   CACAAGGCGCGAGATTG GAATA CAATTTCGCGCCTTTTG   TTTTTATGGGCCTTG 100 60
        rplK NONE
        rplA  838052 ..  838088 +  -6.6  -2.78463   AAACTAATGCCTTTA   CGTGGGCGGTGATTTTG TCTA CAATCTTACC-CCCACG    TATGCTAACGAAAGT  55 34
        rplJ  838825 ..  838838 +  -3.8  -4.07746   GCGATGCGAAAGAAG               CTGC TTAATC GCAG                TTATCTTTTTAACGC  59 18
        rplL  839304 ..  839329 + -17.7  -4.64766   AGAAATCAGGCTGAT         GGCTGGTGACT TTTT AGTCACCAGCC          TTTTTGCGCTGTAAG 100 65
        rpoB  843632 ..  843659 + -12.7  -2.65298   CGCTCAAACAGGTCA        CTGCTGTCGGG GTAAAA CCCGGCAGCGG         ATTGTGCTAACTCCG  81 45
        rpoC  847939 ..  847952 +  -9.5  -5.65177   CAAATAACGTAAAAA               CCCGC TTCG GCGGG                TTTTTTTATGGGTGT 100 52
        nudC NONE
        hemE  856196 ..  856207 +  -5.8  -2.63382   TCTGAACAGTATCAC                CGCT AAGG AGCG                 ATTATGGATCTCGCG  50 20
         nfi  856894 ..  856910 +  -4.4  -3.55444   CTAATTCAGGTAAAC              TGCGGA TAATT TCCGTA              TTTGAGAACTCAACA  54 37
HHJ42_RS04055  857636 ..  857648 +  -4.1  -3.65351   GTGTATGCAGGAGAG                TGCTA TTC TGGCA                TTTCCGTCGCACTCG  53 146
        hupA NONE
HHJ42_RS04065  858917 ..  858928 +  -5.8  -3.57263   TCACCAGTTGCTGTT                GCAG TGCG CTGC                 TTTGAGCGTAAAAGT  60 260
        zraS NONE
        zraR  862124 ..  862137 +  -5.9  -3.42078   GTCATTAAGGCGTAG               GCGCG TTTC TGCGC                TTCTGCTACGGTATG  58 110
HHJ42_RS04095 NONE
HHJ42_RS04100  867278 ..  867313 +    -7  -4.00532   AAGTCACCTGCCCAT    TATCTCAAAATTCATC TTCG GGTGATGTTTGAGATA     TTTGCTCTTTAAAAA  68 60
HHJ42_RS04105  870401 ..  870415 +  -2.7  -3.14211   TACAGATTAGATTAA               CCGGC GACAA GCGGG               TTAATGAAACAGAAT  45 76
         rrf  870564 ..  870584 + -11.8   -5.1287   ATCAAATTAGAAAAA            CCCCGGTC AATAA GGCCGGGG            TTTTTTGCATATCAA 100 41
HHJ42_RS04115  871332 ..  871342 +  -2.4  -2.70932   ACATAAACCCAACCG                 GCTG ATC CCGC                 TCATTAACCGCGACC  39 349
        metA  872647 ..  872662 + -10.4  -5.63517   CAGCACCTTACCTCA              GGCACC TTCG GGTGCC               TTTTTTATTTCCGAA 100 71
        aceB NONE
        aceA NONE
        aceK  878023 ..  878033 +  -3.2  -3.56704   CCTGGTCGATAATAA                 TCGC TTC GTGA                 TTGCTTTGATCAAGC  51 470
        metH  882312 ..  882329 + -10.5  -4.82667   GAGTAAGTGATAACA             CCGGGGT ATTT GCCCCGG              TTTTTAATGTCATAA  91 35
HHJ42_RS04155  882707 ..  882721 +  -2.9  -3.86897   GTAATATTTGTTTTC               GTAAA AAGGA TTTAC               TTTATGCAACGTCAA  54 50
HHJ42_RS04160 NONE
HHJ42_RS04165  885038 ..  885060 +  -7.7  -3.17075   GGCACTATGAACAAG           ATGCCGGAT CATGC ATCCGGCAA           TTCACTTAAAAACGG  64 87
        rluF  893555 ..  893591 +  -6.5   -3.4582   TAATGACAAGAAAAA    CAATACGGCCCGAAATA ATG TCTTCCGGGCCATACTG    TGTTTACTCAAATAA  60 511
         pgi  897283 ..  897301 +   -11  -5.26316   TAGCCTTAAAAACAA             TGCCGACG TTA TGTCGGCA             TTTTTTATCAGATAA 100 190
HHJ42_RS04230  897928 ..  897949 + -11.7  -3.32343   GAAGGGGATTAACCA           TAACCACAC TCCG GTGTGGTTA            TTCTGCCCCTCTGGA  85 95
HHJ42_RS04235 NONE
HHJ42_RS04240 NONE
HHJ42_RS04245  901818 ..  901833 +  -5.4  -5.45726   GCTGGTGGCTGGGAA              TCACCT GAAT GGGTGA               TTTTTTTGGGCTGTG  87 402
        psiE  902811 ..  902828 +  -5.5   -3.5764   GCGCCGCCGCTTCTT             CCAGCGA ACTG TCGATGG              TTTCGAAATAACCTT  58 445
        malK  907781 ..  907791 +  -6.8  -2.62184   ACAAAACACACAAAG                 CCTG TCA CAGG                 TGATGTGAAAAAAGA  55 48
        lamB  909200 ..  909234 + -15.7  -3.16961   CCTGATAAGGTGCTT     GCGCCGCATCCGGCA ACCAA TGCCTGATGCGACGC     TGTTGCGTCTTATCA 100 55
        malM  910537 ..  910556 + -11.4  -5.67967   GATTTTGCAACAACT            GGTGCGTC TCCT GGCGCACC             TTTTTTTCTCCTCCT 100 58
        ubiC NONE
        ubiA  912078 ..  912095 + -11.3  -4.35604   TGATGATGTAAAAAA             GCCGGAT GATC ATCCGGC              TTTCTTCTGGGTTGC  93 38
        dgkA  915199 ..  915213 +  -3.6  -3.41126   CCTTCCAGATTTCGA               TAAATC TCT GGTTTA               TTGTGCAGTTTATGG  48 42
        lexA  915914 ..  915937 +   -16  -4.94262   AACATATCTCTGAGA          CCGCGATGCC GCCT GGCGTCGCGG           TTTGTTTTTCATCTC 100 39
        dinF  917357 ..  917377 +  -2.6  -2.69964   CTACACTTAATCTCA            CGTTCA GAAGAAAAG TGAACG            TACTCTCATTCACAA  41 84
HHJ42_RS04320  918108 ..  918134 +    -3  -5.03314   CGAGACGCTGTGGGG        TCAGGCGCACA TTACGC TGTGCG-CAGA         TTTTTTCAGCCTGCG  77 510
        dusA  919362 ..  919385 +  -9.5  -4.43681   TAGTCAAATTCACCA          CGCCCTGCG CACCGT CGCGGGGTG           TTTTGCTGTTAAATC  86 56
        pspG  919844 ..  919864 + -12.6  -3.99938   AATTATAAAAAGAAA            GGGCTTCC CAGGT GGAAGCCC            TATTTCTTTTATGGA 100 162
        dnaB NONE
         alr  923598 ..  923618 +  -8.3  -3.98661   TGCTCTTATAAAGGT            CGTGCATCT GGC GGATGTACG            TTTGTCATGAGTCTC  76 137
        tyrB  924943 ..  924962 + -13.6  -3.18264   TGTGATTTTAATCAA            CAGGCGGA TCTC TCCGCCTG             TTCCTGACTCCAGCC  93 36
HHJ42_RS04360 NONE
        odhB NONE
        lpdA NONE
        sucC  931643 ..  931654 +  -5.8  -3.21912   GATGATGCCGCTAAA                CGCA TCAT TGCG                 TTACTGAATTAACAG  54 2
        sucD  932570 ..  932586 +  -9.4  -6.06529   ATAAATGAATATCAA              GGGAGC ATATC GCTCCC              TTTTTTTTATCTGTG 100 44
HHJ42_RS04390  935461 ..  935477 +  -2.2  -3.49077   CTGGCCTTCCGTTTG              TCGCAG CATAT CTTCGA              TTAACTTTTTCTCGA  47 137
        aphA  939503 ..  939529 +  -3.6   -3.1595   TCAGAATACTGACAG         AGCGGGAGAG CGTAATA CTCTCCCGAA         TGCTGTTTTTTTAAT  46 29
HHJ42_RS04410 NONE
HHJ42_RS04415  940477 ..  940496 +  -3.6  -4.03995   GGCCTACGTAATCTC            TGCAATAT ATTG AAATTGCA             TGTTTTTGTAGGCCG  57 116
        ssb1  944281 ..  944297 + -10.1  -3.39505   AGCCATAAAAAAGAA              GCCTCCG TTA TGGAGGC              TTCTACATATCAAGT  76 98
        pdeC  946760 ..  946784 +  -7.9  -2.80816   GCCAGTAACAGACGG         CGC-TGGCGA ATGTAA TCGCCAAGCG          TCTGATGCGTCACCG  57 215
        soxR  947476 ..  947500 + -14.4  -4.67651   GGAAGATGAACAAAA          CTAAAGCGCC ACAAG GGCGCTTTAG          TTTGTTTTCCGGTCT 100 22
        ghxP  949390 ..  949421 + -12.4  -4.37658   TCTTACATAGGATTC      TGAAAACGGGTGGC AATG GCTGCCCGTTTTTA       TTTTCTCCGCACATT 100 41
HHJ42_RS04455  951178 ..  951209 +   -10  -3.27994   GAAAATCAGTAATCT      GCATGGTTGGCGGG CGAG CCCGCCAACCCGAC       TTACTCTGGCGTTAA  76 29
HHJ42_RS04465 NONE
HHJ42_RS04470  953739 ..  953758 +  -2.1  -3.10597   GGATAATGGCAATCA            CACCG AGGATCAGTA CGGTG             ATTTTCGATACCCGC  42 474
        nrfA NONE
        nrfB NONE
        nrfC NONE
        nrfD NONE
HHJ42_RS04510 NONE
        nrfF NONE
        nrfG  964673 ..  964689 +  -2.9  -3.41126   CAACACAATTCATGC              CCTGGCA GTA TGTCACG              TTCTCGCGTTTCTGA  46 301
        gltP  966061 ..  966086 + -14.7  -2.91912   ATCAGTAATTGAAGA         TTGCCGGGGGG ATAT CCACCCGGCAA          TGTGTGGATGCCTGA  89 33
        rpiB NONE
        yjdP  990315 ..  990327 +  -6.2  -3.53811   GACAGCCACGCCACC                CGGC TGTGT GCCG                TTTCCAGCAGATAAC  58 346
        crfC NONE
HHJ42_RS04715 1005528 .. 1005586 +  -3.2  -3.62522   AACTGCCCAATTCAG GCGTCAACTGGTTTGATTGTACATTCC TTAACC GGAGAGTGTAAGCAAACCCGCT-ACGC TTGTTACAGAGATTG  51 128
        proP 1007206 .. 1007230 +  -7.1     -2.55   AGCTGAAACGGATGG          CCTGATGTGAC GCT GTCTAATCAGG          TCAATTGAACTCTTA  57 40
        pmrR 1007423 .. 1007440 +  -6.3  -4.07568   ATCCAGGCCCGCGTG             CCGG-AAG TCT CTTGCCGG             TTTTGCAGGAAAAAC  68 56
        melA 1018938 .. 1018952 +  -4.3  -3.57144   CGTATAGAGCAGCGG               CGTTA ACGGG TAACG               TTTAGCGGTGGCAAG  55 499
HHJ42_RS04795 NONE
HHJ42_RS04800 NONE
        ghoS NONE
        ghoT 1026716 .. 1026739 + -15.4  -3.35813   TTGCGGAATGACGAA          CGAAGCAGTC GCCT GACTGCTTCG           TTCATTAAAGTGAAA 100 104
HHJ42_RS04905 1045011 .. 1045031 +  -5.5  -3.22208   AAATGGCGCTCATGA            TGTGAAAAT ATT AATTTCACA            TTACATATTAATTAT  54 26
HHJ42_RS04910 1047239 .. 1047256 +  -8.4  -3.20109   TGTATGTCACGGTAA             GGGCGT CAGCCA ACGCCC              TTAGATCGTTTTCTG  67 70
HHJ42_RS04915 1048101 .. 1048131 +    -6  -3.42283   CGGCTATCCCGGATC       TGCAGGACCGTTCT GAA AGCTCGGTTCAGCA       TCTTTCCCTGCATTC  59 10
HHJ42_RS04920 1048564 .. 1048578 +  -7.8  -4.08974   TCATTCCCTTCGTCC               CGCCAG TCA CTGGTG               TTTGTATCGTACCGT  74 171
HHJ42_RS05070 1074476 .. 1074488 +  -6.9  -3.92659   TTTATTCTGTTTCTT                CCCGG GGG TCGGG                TTTGAATTTTCCCAG  68 92
HHJ42_RS05080 NONE
HHJ42_RS05085 1076299 .. 1076309 +  -5.4  -4.63863   GGAGGGGATATGTCT                 GTCA GGC TGAC                 TTGTTTTTCTCTTAA  74 171
HHJ42_RS05095 NONE
HHJ42_RS05100 NONE
HHJ42_RS05105 NONE
HHJ42_RS05110 1082847 .. 1082859 +  -4.8  -3.06696   GAAGGCATGATTCTG                TCCG AGAGC CGGA                TGTGTTAGAAGCGCA  51 317
HHJ42_RS05145 1089996 .. 1090007 +  -2.2  -3.68324   ACAGCAAGTTAAGGT                GACG ATAA TGTC                 TGTTTCTTGGGCATG  49 54
HHJ42_RS05150 1092458 .. 1092487 + -10.7  -2.53822   CGGGGGAAAGAACAA       TACCGTCGGATCG CCTG CAATCCGACGGCA        ATATTATAGAATAGC  74 42
HHJ42_RS05155 1094045 .. 1094074 +  -6.4  -3.15574   TTTACTGGGCTAGTA       ATGCCGCCTTTT AAACAA GAAGGGCGGCAA        TCTTACTGAAATTAG  57 55
        fxsA 1103956 .. 1103988 +  -4.8   -5.0925   GGATTAATGTCGAAA      CGCCGGATTATG TGGTTATGC CATTTTCCGGCG      TTTTTCGTTTTGGCA  79 34
HHJ42_RS05210 NONE
        groL 1107508 .. 1107531 + -14.6  -5.50723   GCAGAAATAAACAAA          CCCCCAGGCA GAAA TGTCTGGGGG           TTTTTCTTTTGGTCA 100 55
HHJ42_RS05220 1108028 .. 1108038 +  -3.2  -4.31692   ATGAGATTATTTCGC                 CTGT GGT GCAG                 TTTTGCTGGTGGATT  62 84
         efp 1110764 .. 1110795 +   -13  -4.62069   GCGTGAAGTAATGCG      GTTGTGGTGCGGCC TGCA GGCTGCACCATCAC       TTTTTCAGGTCAGAG 100 30
        ecnA NONE
        ecnB 1111201 .. 1111224 + -13.2  -5.13354   AGCAATAAGCAATAA          CGGTACGACA GCTG TGTCGTGCCG           TTTGTTTTTTCTGCG 100 33
        sugE 1111967 .. 1111977 +  -3.2  -3.42197   TCTGCTGCCACATTT                 CTCT GTC AGGG                 TTATAGCCTTTATTA  49 306
        epmA 1118219 .. 1118239 +  -4.8  -3.75419   TTTAAGACTGGATAT            TTGATATC ATCCA GGTATCAA            TTCTGTATTGGTTTT  59 131
        yjeM 1119931 .. 1119946 +  -3.2  -3.16203   AACTATGGGTTACCT              CATGAG TGCG CGCATG               TCTGTCTTGTGCTGC  46 122
HHJ42_RS05295 1120686 .. 1120698 +    -2  -3.76634   TCGGTAATAAACGCC                TTGT TCGGC ACAA                TTATCTCTTTACGGT  51 465
         orn 1126422 .. 1126436 +  -4.2  -2.53759   AATCCACTTGCGGCG               GCGTGA TTT TGACGC               TAAATTGAACGTCTT  44 68
HHJ42_RS05320 NONE
HHJ42_RS05325 NONE
HHJ42_RS05330 1126911 .. 1126938 +  -3.4  -5.27206   CTCTCAATAAAATAT        CCA-CAGCGACGC GAT GCGTTATTGCTGG        TTTTTGTTGTCTCTG  77 48
HHJ42_RS05335 1127564 .. 1127575 +  -5.8  -3.66356   TGGCAGTCATCGCAA                CCGT AAAT ACGG                 TTTCCCATTAACGGT  60 393
         nnr NONE
        tsaE NONE
        amiB NONE
        mutL NONE
        miaA NONE
         hfq 1134841 .. 1134873 +  -7.1  -2.54504   CGGGCTGTTTTTTTA     CA-CGGGGAGC-CAG CGATC CTGCGTTCCCCGCTG     ATCTATTTAGAGGGT  57 46
        hflX NONE
        hflK NONE
        hflC 1138558 .. 1138584 + -13.1  -5.38839   TACAGGTCAATAAAG        CCACCG-CATCC TCAG GGATGTCGGTGG         TTTTCTTTTTCTATA 100 55
HHJ42_RS05390 NONE
        purA 1140264 .. 1140298 +  -9.4  -3.10975   CAGTGTGATACATTG    CTGTGTCGGTTAAGC CATTAC GCT-ATCCGACACAG     TGTTAAATCCTCGCT  71 80
        nsrR NONE
         rnr 1143369 .. 1143396 +  -8.4  -2.57931   CTGACAAAATGCGCT        TTGTTCATGCCG GATG CGGCGTGAACGC         CTTATCCGGCCTACA  63 75
        rlmB 1144239 .. 1144255 +  -8.1  -4.63486   CAGCTAGTTCATCGC              TATCCAT TCA ATGGATA              TTTTGTTAGCCCGAT  85 34
HHJ42_RS05420 NONE
HHJ42_RS05425 NONE
HHJ42_RS05430 1149373 .. 1149390 +  -9.9  -6.32216   GGTTCTTCTTAATAG             CCATCCA GATT TGGATGG              TTTTTTTTTGTCTAT 100 109
HHJ42_RS05435 NONE
HHJ42_RS05440 1150603 .. 1150629 + -12.4  -2.79004   GGGCGAGTAATTTTT         TTGCCAGCCT CACTGCA AGGCTGGCAA         CTATTTTAAGGATAA  82 31
HHJ42_RS05445 NONE
HHJ42_RS05450 NONE
HHJ42_RS05455 NONE
HHJ42_RS05460 1153573 .. 1153602 + -13.7  -3.14132   TCTGTCATGAATCCA       TGGCAGTGACCAT ACTA ATGGTGACTGCCA        TTGATGGAGGGAGAC  93 61
        yjfP 1157534 .. 1157546 +  -4.7  -3.57792   CGCCCGGATTAACCA                GCTGC GAG GCCGC                TTTAGCGATACGTAC  55 510
        ulaA 1160718 .. 1160732 +  -2.8  -4.48987   AACTGGCAGAACAGT               CTGCTT AAT AAGGAG               TTTTGATTATGACCG  63 18
        ulaB NONE
        ulaC NONE
        ulaD NONE
        ulaE NONE
        ulaF 1163941 .. 1163953 +  -9.1  -3.13625   TACGTGGTAGTACGT                TGCGC CTT GCGCA                TCTGTCTCTTCATTT  67 232
        rpsF NONE
        priB NONE
        rpsR 1165416 .. 1165426 +  -2.4  -2.50307   TCGCCATCAGTAATC                 GGTC ACG GTCC                 ATTAATACGACTTTG  39 28
        rplI 1165925 .. 1165953 + -16.1  -3.33352   TATTCAACGAGACGT        AAAAACGCCGACC ATT GGTCGGCGTTTTG        CTTTCTATTTTTCGT 100 46
HHJ42_RS05580 1170814 .. 1170824 +    -4   -3.1372   AAATTAACATTAGAT                 CTAA ATC TTAG                 TATTCATCCCGCGTA  48 204
        cycA 1172369 .. 1172393 + -16.5  -4.19817   TAACCGCATTATCAT          GCTGGATGGCG CAA TGCCATCCAGC          TTTTAGATCACTCAC 100 38
HHJ42_RS05605 1175637 .. 1175664 +   -12  -3.35467   TAAGATGCGCCAGCA        TCGCATCCGACA AAAG TGCCGGATGCGG         TTGATGATTTATAGG  85 89
        cysQ 1179019 .. 1179043 +  -4.1   -3.5882   CCCCGATCGGTAATG          CCAATCGGCGG CAC TCGCTGACCGG          TTTCGAACTGATGTG  53 475
HHJ42_RS05625 1179672 .. 1179692 + -16.9  -3.50335   TATGCAGTAATAAGA            CGGCTCCTG ATT CAGGAGCCG            TTGATGTTTCTGGGG 100 50
        tamA 1183934 .. 1183945 +  -4.4  -2.69546   ACAGTTTTACATCGG                TCTG GGGC CAGA                 ATTATGAGTTTATGG  47 7
        tamB NONE
HHJ42_RS05650 1188084 .. 1188101 + -12.7  -4.32067   GTAATAATAAAAGCA             CGCCACC TTCG GGTGGCG              TTGTTTTATGCGATG 100 37
        ytfQ 1190330 .. 1190344 +  -7.1  -3.42996   GCTGAAGCCTGATGC               GACGC TTACC GCGTC               TTATCATGCCTACTG  65 108
HHJ42_RS05665 NONE
HHJ42_RS05670 NONE
        yjfF 1194298 .. 1194317 +  -6.5  -3.40371   TTCTTCACCCCGTTC            GGAAACT TAATGT AGTTTCC             TTCGTTGATGGAGTA  56 416
         mpl 1196518 .. 1196547 + -13.5  -2.74792   ATATAGTGTGCGTAG       GCCGGATAAGGCG TTCA CGCCGCATCCGGC        ATTTGAGCATAGTGC  86 56
        pmbA 1198646 .. 1198667 +  -7.2  -2.50016   CGGGCAGTAAAAAAA           CTGGCGCG ACCTGC CGCGCCAA            ATCTTCATAATAAAA  57 31
        cybC 1199090 .. 1199123 + -14.7   -3.4072   ATCGTTAATTCCTCA     TTTCCCTGTTGCCTG CACT CAGGTAACAGGGAAC      TTATCATCGCAAATG 100 33
        mgtL 1206839 .. 1206849 +  -6.8  -3.81488   TGTTTCAGACAGTGC                 GGAG GGA CTCC                 TTATGTTTAAAGAAA  66 132
        mgtA 1209722 .. 1209741 + -10.7  -3.65827   TGTCATCAGACTTAA            TCCGGGC ATGATA GCCCGGA             TTTCCATCAAGATTA  83 199
HHJ42_RS05770 NONE
        tabA 1214549 .. 1214580 +  -7.4  -3.85698   ATGGCGTGATGACTT      TTCGCCGTAAAT AACTCCAG GTTTACGGCGAG       TTTGTGAAAAGAGCG  68 32
HHJ42_RS05780 1216466 .. 1216492 +  -6.6  -3.53174   CATAAAATAATGTAA         TGCCGGGA TGGTTTGTATT TCCCGGCA         TCTTTATAACAATAT  62 36
        rraB 1218108 .. 1218133 +    -9  -5.47399   ATTAATTGATTAAAA         TGCCCGATAG CACACA CTAGCGGGCA          TTTTTTTAGAGTTCG 100 40
HHJ42_RS05800 1220044 .. 1220063 +   -15  -3.72073   GTAAGAGATAAAAAA            GGCCGGAG CATG CTCCGGCC             TTCGTTTTCATCACT 100 37
        lptF NONE
        lptG 1227716 .. 1227739 +   -14   -3.9461   AACCTGATGAACGAA          TAAAGGGAGC GAAA GCTCCCTTTA           TTATTGTTAGCAAAG 100 39
        idnK 1234844 .. 1234859 +  -6.8  -3.05562   GCCAGAGTTTTCAGT              GCCTGCG GAT CGC-GGC              TATTCACCACTTTAT  56 378
HHJ42_RS05865 1235809 .. 1235824 +    -9  -5.64274   AAAAGTATGTAAATA              GACCTC AACT GAGGTC               TTTTTTTATGCCTGA 100 40
HHJ42_RS05905 1246497 .. 1246522 +  -5.4  -4.62984   AATGTAAAAACTATA         CGCCTCTTGA TTTAAT TCAGGAGGCC          TTTTATGTATGATCA  74 34
HHJ42_RS05910 1247048 .. 1247058 +  -5.4  -3.95378   GAACGCCGGTTCCGC                 TGTC GCC GACA                 TTATTTCACCTATCG  63 417
HHJ42_RS05950 1253546 .. 1253568 +  -6.2  -5.21709   ACCAGCTCCGTGAAT           GTCCGCTCTG GCA CAGAGCGAAA           TTTTTTGATCTCCCC  87 216
HHJ42_RS06005 1263765 .. 1263785 +  -4.5  -3.91674   CGCGGCTAAGTGAAC            CGCCCCGGG TTT CCTGGAGAG            TGTTTTATCTGTGAA  59 326
HHJ42_RS06015 1265852 .. 1265872 +  -3.2  -2.85351   CACGGAAGCAGTTCG           CTGACCCGG TTGA CCGGC-CAG            TCTGCTATGACGCCA  44 304
HHJ42_RS06025 1267377 .. 1267393 + -10.1  -3.32202   AATCTCCGGCCTGCC              GGCGGCA TTC TGCTGCC              TGTTATATCCCCGTG  76 76
HHJ42_RS06030 1268099 .. 1268111 +  -4.7  -3.48593   GTCTGCCTGCCGTTT                CGCTC TCC GTGCG                TTCTGTCACACGCTG  54 101
HHJ42_RS06040 1272244 .. 1272271 + -17.8  -5.45652   TGCTGTTTTGTACCT        GCCGGTATCCAC ATTT GTGGGTACCGGC         TTTTTTATTCACCCT 100 338
        ag43 1275445 .. 1275467 + -19.2  -4.98531   GTCACTCTCCTTCAG           GCCCCGGTCA TCA TGACCGGGGC           TTTTTACTTTCAGGG 100 48
HHJ42_RS06050 1275730 .. 1275755 + -13.3  -5.09521   CATTTCATCTGTCAG         GCCGCGTCTTC TCCG GGAGACGTGGC          TTTTTCATTTATTAC 100 104
HHJ42_RS06055 1276668 .. 1276697 + -16.5  -3.34455   GGCACCAGAATCACC       CGACGCCCCGG-AG GCG CTGCCGGGGTGTCG       TTCCATTTCTGATGA 100 69
HHJ42_RS06065 NONE
HHJ42_RS06070 NONE
HHJ42_RS06075 1278350 .. 1278368 +  -3.8   -2.5758   ATCGTTAAACTATCA             TTCACCGA TTT TCTGTGAG             GATTTTATCGTGTCA  44 160
HHJ42_RS06080 1279215 .. 1279226 +  -4.4  -3.15663   GATAGATCAGTTTAT                CGAT ATTG ATCG                 TTAGTGCCGATCGAT  50 494
HHJ42_RS06090 NONE
        mtnA NONE
HHJ42_RS06100 1282761 .. 1282783 + -10.6  -3.14125   AATTAATAACATATG           ACAGCCATTC GCA GAATGGCTGC           TATTCCCTCTGTCCA  78 56
HHJ42_RS06105 1283843 .. 1283866 + -12.5  -3.95647   CTAATCAATAAAATC          CTGCCCCAT ATCTAC ATGGGGCAG           TTGTTCATTCTTTTA 100 30
HHJ42_RS06195 1300999 .. 1301009 +  -4.6  -4.63542   AATAACAACGGTTTA                 TGCG GTG CGCG                 TTTTTCACCCTTGTG  71 452
        fimB 1306463 .. 1306492 + -10.9  -5.10064   TTAATGTAATTGACT       GATAGCCACATCAC TCC GTG-TGTGGTTATC       TTTTTATCTATTGGG 100 388
        fimE 1307608 .. 1307622 +  -2.8  -2.75536   ACAAAGTGTACAGAA               CGAC TGCCCAT GTCG               ATTTAGAAATAGTTT  41 459
        fimA 1308232 .. 1308248 +  -3.5  -3.32963   AGGGACGTCATTACG              GGCAGGG ATG CCCACCC              TTGTGCGATAAAAAT  48 54
HHJ42_RS06230 NONE
        fimC NONE
        fimD NONE
        fimF NONE
        fimG NONE
        fimH 1314462 .. 1314482 + -16.9  -2.75838   CTTTGTCATCAGTCT            GAGCCTGCC ATT GGCAGGCTC            TGGTGTCCTTTTACG 100 237
        uxuA 1317367 .. 1317391 +   -15  -3.58329   AGCCGTTAATATCCA          CCGGCATGGC TGCGC GCCGTGCCGG          TTCCTTCTTCCTTGC 100 32
HHJ42_RS06270 1318926 .. 1318957 + -12.5  -4.94243   TACCCTACAGACTTA      CTGGTCAATCAAA CTGATA TTTGGTTGACCAG       TTTTCGTTTTTTTGC 100 50
        uxuR 1319903 .. 1319927 +  -9.3   -4.2528   GACTTATTATAATAA          GCGCAAGGG TAAACGT TCCTTGCGC          TTTCTTAAATTAAGA  82 39
HHJ42_RS06285 NONE
        iraD 1322014 .. 1322036 +  -4.1  -3.05384   ATGCATAGGCCTGAA           TCGGGATCA CCAGT TCGTCCCGA           TTCAGTACAACGAGC  46 113
        kptA 1326120 .. 1326139 +  -5.6  -3.16676   GCCGCGCCGCAGAGA            GTGGCGCT GGCA AGCGCCGA             TGTTCCATTGCTGAG  52 120
HHJ42_RS06350 NONE
HHJ42_RS06355 NONE
HHJ42_RS06360 1335519 .. 1335539 +  -7.5  -3.12351   CGACAGCTTGCACAC            CTGGCGCAG CGA CTGCATCAG            TTCGCTCTCGGCGGC  59 153
HHJ42_RS06385 1342839 .. 1342850 +    -3  -3.58879   ACGTGCCTGGATGGC                TGAA ATAA TTCA                 TCTTTATAAATTATA  50 18
HHJ42_RS06390 1343373 .. 1343383 +  -2.4  -4.18018   GTTTATCCGCCGACT                 CCAG CAG CAGG                 TTTTCCATCACGCGG  58 320
         tsr 1348652 .. 1348676 + -12.9  -5.29445   GTTTTAACGTAATGA          TGCCGGATGAG TAT TTCATCCGGCG          TTTTTATTATTAAAC 100 34
HHJ42_RS06430 1353824 .. 1353876 +   -11  -3.36655   TATCGCTGCCAGTAA TAGGGAATTAAATGATGGCTGAGAGT AAT ACTTCCAGC-ATCGTTTA-TTCCCTA TGTATTTCCTTATGG  80 44
HHJ42_RS06440 1356070 .. 1356096 +  -5.8  -6.15717   ATTAAAGTTGCCATG         CAGCGTCCGG GGAAGTG TTGGGCGCTG         TTTTTTTTCTGTTTC 100 53
        bglJ 1364228 .. 1364248 + -11.9  -2.80922   GCTGATTAACGTTTC            CATTCGCTG CTG CGGCGAATG            TAGTGTTGCGTTTTT  73 381
HHJ42_RS06490 1365553 .. 1365570 +  -4.9  -3.91897   AAAAATGTCCATCAG             CGAATTG TGGA TAATTCG              TTTGTCGGTCAGAGA  61 503
        holD NONE
        rimI NONE
        yjjG 1368346 .. 1368360 +  -9.2  -3.14132   TCGTTTTCAACAAGC               GCGGCG CGA TGCCGC               TTACTCAAGAAGAAA  70 81
        prfC 1369981 .. 1370006 + -14.7  -2.68338   ATTAATTCTAGCCTC         CAGGGCGCGGT AGCC GCTGCGCCCTG          TCAATTTCCCTTCCT  89 36
        osmY 1371038 .. 1371052 +  -4.2  -2.62396   TAAAAATATCGCATT               GAGTGA TTT TCACGC               TCATATCAAGCGGTG  44 95
HHJ42_RS06540 1371288 .. 1371306 + -14.6  -4.28049   AAAATTTTATCCAAA             GCCAGTCC AGC GGACTGGC             TTTTGCGGTTTTAGC 100 57
HHJ42_RS06545 NONE
HHJ42_RS06550 1373281 .. 1373294 +  -8.1   -3.4252   CACAATGCCTGATGC               GACGC TGAC GCGTC                TTATCATGCCTACAA  67 79
        deoC 1376900 .. 1376912 +  -3.3  -3.13722   ATGCAGCGATGCTCA                TCCGG TTC CCCGA                TTACCTCGTCTCTTT  46 59
        deoA 1378275 .. 1378285 +    -4  -3.84451   CGAATAACGGTATAC                 TGAT CCG ATCA                 TTTAAATTTGAAGCA  55 34
        deoB 1379550 .. 1379569 + -10.7  -3.88498   GTTCTGATGGATTTG            GGCGGAG CAGTGA CTCCGCC             TTTAATATGTCACAA  86 34
        deoD 1380351 .. 1380374 + -12.4  -4.97461   CGATTGTCGTGTGAA          GCCGGAGTGG GAGA CTGCTCCGGC           TTTTTAGTATTTATT 100 59
        serB NONE
        radA NONE
        nadR 1386221 .. 1386235 +  -7.2  -3.08173   GGGAGCAAAGATAAT               CATCTT TAT AAGATG               TTGAGTGGGATTACT  60 27
HHJ42_RS06615 NONE
HHJ42_RS06620 1386942 .. 1386975 + -13.1  -4.15508   TAATCATTTAACTAA     TACCGGATGCGATGC TGGT GCGCCGCATCCGGCA      TTTTACGCATTACTT 100 38
        sltY 1390807 .. 1390823 +  -4.5  -2.61144   ACTGATCCACACGTT              TATGATA TGC TATCGTA              CTCTTTAGCGAGTAC  46 36
        trpR 1391521 .. 1391537 +  -5.8  -4.52589   TAGCCGAACGCGCCT             CGCC-GC GCTG GCTGGCG              TTTTCTATCACCACC  74 334
        gpmB 1392781 .. 1392793 +  -7.7  -3.46144   CTGAGCTAACGCGGT                GGTGT AGA ACACC                TCTTGTTCGTCGTCT  64 295
        creA NONE
        creB NONE
        creC NONE
        creD 1397614 .. 1397631 + -12.7  -5.42259   GTTGAAAAATAAAAA             CGGCGCT AAAA AGCGCCG              TTTTTTTGACGGTGG 100 42
HHJ42_RS06680 1398798 .. 1398808 +  -2.6   -3.4252   ATTATCGAGATTTAT                 TTTT TAT AAAA                 TTATCCTAAGTAAAC  48 215
HHJ42_RS06685 1399825 .. 1399846 +  -4.5  -2.91322   TGAGTAAATTAAAAT           TTTATTGAC TTAG GTCACTAAA            TACTTTAACCAATAT  48 156
        thrL 1399998 .. 1400019 +   -13  -5.75342   GAAACACAGAAAAAA           GCCCGCAC CTGACA GTGCGGGC            TTTTTTTTCGACCAA 100 41
        thrA NONE
        thrB NONE
        thrC 1404761 .. 1404787 +    -8  -5.24129   CATTATCTCAATCAG        GCCGGGTTTGC TTTTAT GCAG-CCCGGC         TTTTTTATGAAGAAA  91 49
HHJ42_RS06710 1405291 .. 1405304 +  -8.1  -3.30243   TTCAGCGCCTGATGC               GACGC TGGC GCGTC                TTATCAGGCCTACGT  65 69
         tal 1408915 .. 1408944 + -12.9   -2.5294   CTGCTGTAATCATAC       TTAGCGTGACCGG GAAG TCGGTCACGCTAC        CTCTTCTGAAACCTG  84 32
         mog 1409713 .. 1409771 +  -2.3  -2.78639   CAATATATTGAATTT GCACGATTT-TGTAGGCCGGATAAGGCG TTCA CGCCGCATCCGGCATAAACAAAGCGCAC GTTGTTAACAATCTT  40 128
        dnaJ 1415260 .. 1415281 + -13.7  -3.39449   CGAGCACCTGTAAAG           TGGCGGGGA TCAC TCCCCGCCG            TTGCTCTTACTCGGA 100 118
HHJ42_RS06765 NONE
HHJ42_RS06770 1418378 .. 1418406 + -16.9  -4.21933   TTAGGGCTATGCCCG        CCTGATTCAGTGC TAC GCATTGAATCAGG        TTCTTTTCGCGTTGA 100 74
HHJ42_RS06775 1419914 .. 1419925 +  -4.4  -3.08813   TCGTGCGGGGTAAAA                TCGT GAAA ACGA                 TCTATTCACCTGAAG  49 222
        nhaA 1421134 .. 1421153 + -10.7  -4.59414   CAGGACGATGTACTG            GGGAGCC ATAAAC GGCTCCC             TTTTCATTGTTATCA  95 41
        nhaR 1422135 .. 1422148 +  -9.5  -5.40474   ATGGATATAAAAAAA               CCCGC CAGA GCGGG                TTTTTTTACAAAGCT 100 77
HHJ42_RS06795 NONE
        ribF 1423704 .. 1423717 +  -3.7  -3.54475   TTTGGGCTAACAAAA               CCGGC TTAA GCCTG                TTATGTAATCAAACC  52 17
        ileS NONE
        lspA 1427083 .. 1427096 +  -6.7  -3.30124   AACCCTGCCGGATGC               GATGC TGAC GCATC                TTATCCGGCCTACAG  61 43
        fkpB NONE
        ispH 1428603 .. 1428622 +  -9.3  -5.24129   TAAGTTATGCGAAAA            TGCCGGT CTTGTT ACCGGCA             TTTTTTATGGAGAAA 100 54
        rihC 1429571 .. 1429598 +  -6.4  -3.70149   CTGTCACATGTTATC        GGCATGCAGTC ATTCATC GACT-CATGCC        TTTCACTGATATCCC  62 42
        dapB 1430693 .. 1430703 +  -2.6  -4.17491   TTCTGTTTTTGTTGT                 TTTA ATG TAAA                 TTTTGACCATTTGGT  58 176
        carA NONE
        carB 1435436 .. 1435455 +   -10  -5.77853   ATCGAATAACTAATA            CGGTTCTC TGAT GAGGACCG             TTTTTTTTGCCCATT 100 79
        caiF 1436180 .. 1436202 +  -8.4  -4.33165   TCGGCGTCACATCCG           TCGTCCCC TGCAAAC GGGGGCGA           TTTTCCTCCATTTGC  84 167
HHJ42_RS06880 NONE
HHJ42_RS06885 1445475 .. 1445489 +  -3.5  -3.17763   CCTTCCGGCACTGAC              CGCAGC TTTA GC-GCG               TTGATCCACTCTGGC  46 7
HHJ42_RS06890 NONE
        fixX 1447101 .. 1447111 +  -2.4  -2.83798   CCTTTGGTGTGGAGT                 TCCG TTA CGGC                 TGATGTTGGTTTGAT  40 12
HHJ42_RS06900 NONE
        kefF NONE
        kefC 1451127 .. 1451139 +  -3.3  -3.72363   ACATCATCCTCGCAC                CAGTC GAC GACGG                TTTACGCTTTACGTA  53 155
        folA NONE
HHJ42_RS06920 NONE
HHJ42_RS06925 1452654 .. 1452664 +  -2.4  -3.95378   CCAGCCCCCGCAATT                 CCGG TGA CCAG                 TTATTTGGCATATCG  54 375
        djlA 1460133 .. 1460188 +  -8.3  -2.57931   TAGGCCTGATAAGAC GCGGCCCGCGTCGCATCAGGCAAT CGGCGCAAA ATTGCCGGATGCGGCGTGAAC-GC CTTCTCCGGCCTACC  63 52
        araC 1471774 .. 1471802 + -13.9  -3.28261   GGTTGTGAATAATAA        GAAAGAAGGGGGG GAA CCCCCTTGCTTTC        TTCATCTGACGTTAT 100 29
HHJ42_RS07000 1472584 .. 1472598 +  -4.3  -3.19246   CATGTCTTTCACCCA               CTCTT AAAGC AAGAG               TTGCCTTAACGTTAA  50 86
HHJ42_RS07010 1473678 .. 1473690 +  -4.8  -3.25088   AGTAGCATAGGGTTT                GCAG AATCC CTGC                TTCGTCCATTTGACA  52 144
HHJ42_RS07015 1474508 .. 1474522 +  -7.1  -3.30124   CGGGTTGCCTGATGC               GACGC TTGCC GCGTC               TTATCAGGCCTGCAA  63 55
        sgrT 1479927 .. 1479949 + -10.6  -5.93252   GGTGTTAATCGCCAC           GCCAGCAG TGATTAT CTGCTGGC           TTTTTTCTTTTTGGC 100 70
        leuO 1486457 .. 1486496 +   -16  -5.49234   CAAACGCTAACTGAA  TGCAGAATAGGTCAGACA TCAA TGTCTGGTTTATTCTGCA   TTTTTTATTGAATGT 100 31
        ilvI NONE
        ilvN 1488977 .. 1489006 +  -2.1  -3.53091   CACGCGGCGATAAAA       TAATGCGTTGAGA ATGA TCTCAATGCGCAA        TTTGCAGCCCAACAT  47 15
HHJ42_RS07085 1489117 .. 1489139 +  -2.8  -4.87318   GTTAATGAATTTAAC          CCATA-CCA GTACAA TGGCTATGG           TTTTTACATTTTACG  68 57
         cra 1490188 .. 1490215 +   -12  -3.05596   CCGCGAACAAAAGTA        CGCGCCAG-GTGA ATT TCTCTCTGGCGCG        TTGAGTACGGGAATG  81 42
        mraZ NONE
        rsmH NONE
        ftsL NONE
        ftsI NONE
        murE NONE
        murF NONE
        mraY NONE
        murD NONE
        ftsW NONE
        murG 1501854 .. 1501875 +  -3.8  -2.64651   GCCCGGGCGTAATTG           TAGCGATGC CTTTT GCATCG-TA           TGAATTTAAGAAGTT  44 29
        murC NONE
        ddlB NONE
        ftsQ 1505484 .. 1505499 +  -5.4  -3.13299   AAATCGGTGCGTGTG              CGCGAT GAGC ATCGTG               TGTTGCATGTGATCC  54 385
        ftsZ 1507646 .. 1507667 +  -6.7  -3.09208   TGCTAAACTGGCCCG           CCGAA-TGTA TAG TACACTTCGG           TTGGATAGGTAATTT  58 75
        lpxC 1508641 .. 1508684 +  -4.5  -6.17292   CTGTCGTATAAAATT CGACTGGCAAATCTGGC ACTCTCTCCG GCCAGGTGAACCAGTCG TTTTTTTTTGAATTT 100 52
        secM 1509385 .. 1509404 +  -4.2  -3.80207   GTTACTTCATTTTAT            TGACTCCGC AAC GCGGGG-CG            TTTGAGATTTTATTA  55 53
        secA 1512146 .. 1512163 + -12.7  -5.33866   ACAGTTGAAGTAAAA             GGCGCAG GATT CTGCGCC              TTTTTTATAGGTTTA 100 47
        mutT 1512622 .. 1512636 +  -3.4  -4.36914   GCATATGATGCCTGA               TGCGAC GCT GGCGCG               TTTTATCAGGCCAGC  62 65
        guaC 1515517 .. 1515542 + -16.2  -3.36671   CCTGTAATATACCAA         CGCTGGCGTG GAGCAA CACGCCAGCG          TTATCCCATTCCACT 100 34
        ampD NONE
        ampE 1521214 .. 1521224 +  -2.4  -3.46586   ATTAATGCGCTTTTA                 CGGC TTT GGCG                 GTTTTCTCTTTAAAC  47 82
HHJ42_RS07250 1525204 .. 1525228 +  -8.7  -3.14602   ACTATATATGGAACA          TCATCGCAT CTGGCTA ATGCGATGA          TATTAATGACATAAA  67 54
HHJ42_RS07255 NONE
HHJ42_RS07260 1525900 .. 1525928 +  -9.7  -3.16683   AAACTATATATGGAA        CATCATCGCGT CTGGCTA ATGCGATGATG        TTAATAACATAAAAT  72 52
HHJ42_RS07265 1526297 .. 1526307 +  -2.6  -4.56597   ATGCATGATTTAAAA                 TATA AAA TATA                 TTTTTACACAGAAGG  63 94
        pdhR 1527797 .. 1527822 +  -4.9  -3.24924   GAAAGAATTAGTGAT         TTTTCTGG-TAA AAA TTATCCAGAAGA         TGTTGTAAATCAAGC  52 30
        aceE NONE
        aceF 1532532 .. 1532549 + -14.1  -5.32882   GATGTAAGTAAAAGA             GCCGGCC CAAC GGCCGGC              TTTTTTCTGGTAATC 100 34
        lpdA 1534480 .. 1534496 +  -6.5  -5.03314   TGTCATCAGTCTTAA              GCGGC TAACAAC GCCGC              TTTTTTACGCCTGCA  83 233
        acnB 1539259 .. 1539284 + -12.7  -5.72622   GCATAAACGACACAA         TGCCCGGTGAAT GAG ATTC-CCGGGCA         TTTTTTATTTCTAAA 100 61
HHJ42_RS07305 1539846 .. 1539883 +  -3.5  -3.19293   CTCGCGCATTTCTTT  CC-ACAGCGCAGCGGTA ATTTCC TGGCGCT-CGCTGTCGG   TTAAATCTTCCGGTT  47 111
        cueO 1543664 .. 1543683 + -13.6  -3.56727   CCGTATTCGGAAATA            TGCCCGGA TCTC TCCGGGCA             TTATGGTTACTTCAC 100 46
         hpt 1546826 .. 1546859 +  -3.1   -5.4182   CTGGACGAGTAAGTG     TGAAGTTGCCGGATGT GTT GCATCCGGCA-TGGCA     TTTTTATTTGTGGTT  81 29
HHJ42_RS07345 NONE
HHJ42_RS07350 1549334 .. 1549363 +  -9.3  -4.10657   CGTAGCTAAGGCTAT       TTCCTCTCCTCTG GATT TGGGGGAGAGGAG        TTTTGACGGCTATCA  80 32
HHJ42_RS07355 1549889 .. 1549910 +  -5.2  -3.92542   CCGCGATTCTGATGA           CGCTTTTG CTACAA TAAAAGCG            TTGTTTCACCCTCGG  61 42
HHJ42_RS07360 1551582 .. 1551596 + -11.4  -3.56099   CCTGTCGTTAACGAA               GCAGGC GAT GCCTGC               TTTGAGGAAATTCTC  85 442
        rpnC NONE
        hrpB 1569472 .. 1569489 +  -4.8  -3.61398   CAGAAGAACAGAAAA             TCGGGC TTTTGC GCCTGA              TTATTGCGGAGAAAA  57 83
        mrcB 1572161 .. 1572180 +  -9.2  -3.68662   GCGCAGATTGCGTAC            CGCTTGCG AACC CGCCAGCG             TTTCGAATATTATCT  75 150
        fhuA 1574526 .. 1574545 +   -15  -2.74322   CTAATTTCTCTTTTG            GGGCACGG ATTT CCGTGCCC             GTTTCACAAGTTGGC  89 37
        fhuC NONE
        fhuD NONE
        fhuB 1578234 .. 1578262 +  -8.7  -2.73542   GCAGAGCCGTTAATA        GAATGCCTCGCCC GGT GGGCGAGGCAAAA        TCATTACAACTTCGC  64 28
        clcA NONE
HHJ42_RS07490 NONE
        erpA 1581630 .. 1581654 + -17.3  -2.92175   CTAATCTGCTGTTCA          TGTGCCGGATA AAC TATCCGGCACA          TCTCCTCTCTTCAAC 100 37
         dgt NONE
        degP 1586983 .. 1587006 + -14.6  -3.52093   AGTAATCTCCCTCAA          CCCCTTCCTG AAAA CGGGAAGGGG           TTCTCCTTACAATCT 100 36
        cdaR 1588596 .. 1588610 +  -7.1  -4.40003   AAACTTCACGCTCTT               GGCGA AAAAC TCGCC               TTTGTCTTTCTGGAA  75 337
        rpsB 1595280 .. 1595300 + -11.1  -4.89729   GTACACGTTTGGTTA            GGGGGCC TGCATAT GGCCCCC            TTTTTCACTTTTATA 100 77
         tsf 1596225 .. 1596246 + -13.7  -4.84761   CTTAATTATCGAAAA           GGAGCCGCC TGAG GGCGGCTTC            TTTTTGTGCCCATCT 100 36
        pyrH 1597104 .. 1597148 + -11.5  -2.57501   CCCGTGATGGATAAA TAAGGGTAAGATTCCGCGTAA GTA TCGCGGGGGATCTTACCCGTA ATATGTTTAATCAGG  77 43
         frr 1597806 .. 1597854 + -11.8  -5.27206   TGATTTCTTGAACGA CAAAAACGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCGTTTTGC TTTTTATTCTGTCTC 100 38
        ispC 1599186 .. 1599203 +  -8.4  -6.02914   TATAAGGTCAGGTAT             GCCGTG GTTTTA CACGGC              TTTTTTTTGTATAGG 100 130
        ispU NONE
        cdsA NONE
        rseP 1602250 .. 1602265 +  -5.4  -3.33696   ACTTTTCAATGATTT              CTCTCG GTTA TGAGAG               TTAGTTAGGAAGAAC  56 13
        bamA NONE
         skp NONE
        lpxD 1606387 .. 1606424 + -12.7  -4.07515   TTGTTCGCCAAACTT   TACGGCCTGTCTCATTC TTAC GATTGCGGCAGGCCGTG    TTATTATTGTCGTTT 100 52
        fabZ 1606903 .. 1606924 +  -4.3  -2.79098   ACGATGATGTGTGCT           CGTAGCCGG GAGG CCTGATACG            TGATTGATAAATCCG  47 8
        lpxA NONE
        lpxB NONE
        rnhB 1609439 .. 1609450 +  -5.8  -3.01243   GTCAAACGCGCACTG                GGAC TTGC GTCC                 TGATTCTTGTGTCGA  52 11
        dnaE NONE
        accA 1613964 .. 1613981 +  -9.1  -5.24129   CAAATGTTCTGAAAA             GGGTCAC TTCG GTGGCCC              TTTTTTATCGCCACG 100 45
        ldcC NONE
HHJ42_RS07645 1616649 .. 1616669 +  -7.5  -3.24925   TGTCATCGCCGCATT            TGCCCGGTA ACG TGCCCGGCA            TTGCTACTGTAAAAT  62 45
        tilS 1618325 .. 1618338 +  -8.1  -4.65895   ACCAGTAAGTTTGCC               GCAGC GTAT GCTGC                TTTTTCCCTGACAGC  84 343
HHJ42_RS07665 NONE
        arfB 1619661 .. 1619674 +  -8.1  -3.51778   GATAGTGACAGCGAT               GGCTG TAAT CAGCC                TCTTTACTCTGATGG  67 68
        gmhB 1627859 .. 1627873 +  -6.4  -3.12351   GGTTGAAGAGAAAAA               TCCTGA AAT TCAGGG               TTGACTCTGAAAGAG  56 164
HHJ42_RS07720 NONE
HHJ42_RS07725 1629763 .. 1629794 +  -3.8  -4.20932   TCAAGTCCACTCAGG      CCT-ACCAAATTTGC ACC GCAAATTTGAAGAGG      TTTTAACTACATGTT  62 19
HHJ42_RS07730 1629914 .. 1629947 +  -6.7  -4.49756   ATTAAATAAAAAATA     CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG      TTTTGCTCTTTAAAA  77 52
HHJ42_RS07735 1633036 .. 1633050 +  -2.7  -3.14211   TACAGATTAGATTAA               CCGGC GACAA GCGGG               TTAATGAAACAGAAT  45 76
         rrf 1633202 .. 1633216 +   -10  -2.82742   AAATTTAGCAGTAAG               CCGGTT ATA AACCGG               TGGTTGTAAAAGAAT  71 44
HHJ42_RS07745 1633326 .. 1633345 +   -10   -6.0458   CCACTTATTAAGAAG            CCTCGAGT TAAC GCTCGAGG             TTTTTTTTCGTTTGT 100 38
HHJ42_RS07760 1636253 .. 1636278 +  -8.3  -4.46212   GTCAGGTCTGCCACA         GGGCAG-ACCAA CGT TTGGCGCTGCCC         TTTTATACTCAAACA  87 46
HHJ42_RS07765 1637089 .. 1637109 + -10.4  -4.05848   AGCATAAATAAAAAA            GGCACCGG GGGAA TCGGTGCC            TTTCATTATCTGGTT  82 34
HHJ42_RS07780 1640092 .. 1640104 +  -4.1  -3.33696   TTGATAGCCTGTATC                TTCCA GTG TGGGA                TTCATTGCCGCAGCA  50 49
        dnaQ 1641358 .. 1641368 +  -2.4  -3.33744   AGGCGCTAAAAATAG                 CGAC TTG GGCG                 ATTTTTGCAGCAAAC  45 52
HHJ42_RS07795 1641570 .. 1641592 + -11.4  -5.22312   AATGAGTTCAGAGAG           CCGCAAGATT TTT AATTTTGCGG           TTTTTTCATCTAAAT 100 55
HHJ42_RS07800 1642877 .. 1642916 + -14.6   -4.2408   TCTATAAAACAGCAG  GTACGGTTAATTAAGAAT TTTT ATTCGTGATTAACCGTAC   TTTGTCATTTTATCC 100 248
HHJ42_RS07880 1663839 .. 1663866 + -14.3  -4.89852   ATAAATCTGAGTCAA        CAACATCCTGC CTCCGT GCAGGATGTTG         TTTTTGTACGTGTAA 100 37
HHJ42_RS07890 NONE
HHJ42_RS07895 NONE
HHJ42_RS07900 1669501 .. 1669537 +  -3.8  -5.88061   ACAAATCAGGATGTC    CGGTAAGGTGATTA TTGCTGAGT TAAGCACCTTACCA    TTTTTTTAATTTTTT 100 56
HHJ42_RS07905 1670265 .. 1670286 + -10.9   -2.8733   GCTGCTGAACGAGAA           CGGCGT-CAC AGA GTGGACGCCG           CTGTTTTATGAGGAC  75 424
HHJ42_RS07915 NONE
HHJ42_RS07920 NONE
HHJ42_RS07925 1675055 .. 1675069 +  -7.2  -3.24021   TGGAACATAAATTGC               CAGATA TTC TATCTG               TTAACTATTTGCGCC  62 362
HHJ42_RS07935 1676447 .. 1676471 +  -6.6  -3.70465   TTAACTTGAGTGGTC         CATTG-CCAAT TCAC ATTGGTCAATG          ATTTTTTAAATTGTG  64 0
HHJ42_RS07940 1677238 .. 1677276 +  -6.6  -2.90307   TGATGGAAAAGCACT   TCCACACTCCTGTGATAA AAG TCGTCGCAGGAGAGCGGG   CTTTCGTAGTCTTCC  56 209
         ivy 1678739 .. 1678756 + -12.7  -3.73068   TAGCGGATAAAGAAA             CGGAGCC TTTC GGCTCCG              TTATTCAATTACGCG 100 42
        lpcA 1682039 .. 1682068 + -13.5  -3.01365   GTAAGTCTGGCGTAG       GCCGGATAAGGCG TTTA CGCCGCATCCGGC        ATTTGTGCTCTGATG  87 37
HHJ42_RS07970 1683005 .. 1683020 +  -7.6  -3.21912   TGTAGTTTGATGCCA              GTTGTG GCTG CACAAC               TTCGTGGCTTAACGG  61 31
HHJ42_RS07980 1684825 .. 1684837 +  -9.1   -3.4252   GCCGGTGTCTGATGC                GACGC TAC GCGTC                TTATCATGCCTACAA  73 79
        rayT 1685566 .. 1685578 +  -9.1  -3.40403   GCCGATGCCAGATGC                GACGC TAC GCGTC                TTATCATGCCGACAA  69 147
HHJ42_RS08030 NONE
HHJ42_RS08035 NONE
        fliF 1695362 .. 1695379 +  -4.9  -3.14344   TCACAAAGTTCTGGC             CTCGAAGT GAA ACT-CGAG             TTCCTGCAAAAACTG  52 51
HHJ42_RS08045 NONE
HHJ42_RS08050 1697160 .. 1697170 +  -3.2  -2.60341   ACGCTAACGCCGGAG                 TCGC AGG GTGA                 GTGATTTTTCTGCTT  42 11
        fliI NONE
        fliJ NONE
HHJ42_RS08065 1699460 .. 1699473 +  -3.9  -5.77571   TTGTTTGTTGATATC               TCTAT TTCG ATAGA                TTTTTCTTTTTTCAT 100 143
        flgB NONE
        flgC NONE
HHJ42_RS08115 1707746 .. 1707777 +   -10  -3.05816   CTGCATGGTTTTGTA      GGCCGGATAAGGCG TTCA CGCCGCATCCGGCG       TTCGGTGCAAGATGC  73 92
        flgE 1709125 .. 1709138 +  -3.1  -2.94099   ACGCAGCTCGATGAC               GCGCTG TTC CAG-GC               TATGTAATGGACCGC  44 5
HHJ42_RS08125 NONE
        flgG NONE
        flgH NONE
HHJ42_RS08140 NONE
HHJ42_RS08145 1712973 .. 1713002 + -13.5  -2.72043   GTCGCCCGTATGTAG       GCCGGATAAGGCG TTTA CGCCGCATCCGGC        ATTTGGCACCCGGTT  86 102
        flgK NONE
        flgL 1715382 .. 1715397 +    -4  -2.73028   CTCGAAAGTGAGTGA              GTTGAA TTTG TTCAGC               GTTCTCTAACTCTTT  45 1
HHJ42_RS08160 1716410 .. 1716444 +  -9.9  -3.09135   GGGTAATTATCGGTT     GGCCGGATAAGACGC GTTTA GCGTCGCATCCGGCA     TATATTGGCACTTGT  71 35
        lafA 1719185 .. 1719214 + -16.5  -3.85817   GCCTTATCCGGCCAC       GAACAACACCGCC TGCG GGCGGTGTTGTGC        TTTCTGCGGCAGGCT 100 509
        fliD NONE
        fliS 1721057 .. 1721070 +  -2.4  -2.52676   CGAAGGCTGGGAAGG               GCTT TCGGGC AAGC                TGGGTTAACGCAATG  39 4
HHJ42_RS08185 NONE
HHJ42_RS08190 NONE
HHJ42_RS08195 NONE
HHJ42_RS08200 NONE
        motA NONE
        lafU 1725443 .. 1725461 +    -3  -3.10343   TGGATAAGCAGCAGG             TGCTTTCG CAG CGAGCGCG             TTAAATGCTGAATCT  43 3
        dinB NONE
        yafN NONE
        yafO 1727316 .. 1727326 +  -2.4  -2.87035   TGGGAAAATGGCAGA                 AGCG TTT CGCA                 TGCGTTTTTGAATTT  41 4
HHJ42_RS08230 1727822 .. 1727840 +  -2.3  -2.71055   TTGCAATGAAAATAA             CGCCCGT CTAGT ATGTGCG             CGTTTTCTTATTCCA  40 48
HHJ42_RS08235 NONE
HHJ42_RS08240 1729915 .. 1729936 +  -2.2  -5.00616   TTGGCCCGATAGACA           CCATGTCC ATTTCC GGATACGG            TTTTTTGAACAGACC  71 201
         gpt 1731979 .. 1732003 + -17.9  -4.47888   GGTCGCTAATCTTTT          CAACGCCTGGC ACT GCCGGGCGTTG          TTCTTTTTAACTTCA 100 32
        frsA 1733313 .. 1733329 +  -2.3  -3.73072   GTTTGTGTTAAAAAT              TTGCTAA ATT TTACCAA              TTTGGTAAAACAGTT  51 30
         crl 1733776 .. 1733798 + -13.5  -2.54276   GGCGTGAATGAAATG           TGCCGGATG CATCA CATCCGGCA           ATATTCATTAAAACT  86 34
        proB NONE
        proA 1737525 .. 1737579 +  -8.4  -3.69437   CGTGCGTAAATAAAA CCGGGTGATGCAAAAGTAGCCATTTG ATT CACAAGGCCATTGACGCATCGCCCGG TTAGTTTTAACCTTG  72 32
HHJ42_RS08280 NONE
HHJ42_RS08285 1738444 .. 1738472 +  -3.2  -6.01369   TCTTTTAAATAACAA        CGCCATTAAAAA CGCTT TGTTTAATGACG        TTTTTTTATTGTTTC 100 268
HHJ42_RS08305 1745345 .. 1745363 +  -3.2  -2.66711   ATTTATATTCTCTGA             GAGAAA CATTACA TTTCTC             CTTGTCACTTCTAAC  42 58
HHJ42_RS08310 1746160 .. 1746178 +  -8.8  -4.91712   TTTGAATGATAAAAA             TGGCGCAA ATA TAGCGCCA             TTTTTATAGGTTAAA  91 44
HHJ42_RS08385 1759611 .. 1759622 +  -2.2   -4.2704   GAAGAATGGCGCAAT                CGTG AGGA TACG                 TTTATTCATAATAAA  57 65
HHJ42_RS08390 1760932 .. 1760955 +  -5.2  -4.90013   CCCTTTCTCCGCAGC          CAGTTCACCT AACA AGGTGACCAG           TTTTTCATTGGCTTC  80 293
        fdeC 1767400 .. 1767428 +  -9.7    -3.767   CGATGTAATAAATAA        TAATGGCGTTG ACATGCG CAGCGCCATTA        TTTACTGAATACCTA  79 47
HHJ42_RS08415 1769814 .. 1769830 +  -4.3  -2.72344   ACCCAATGCGGGTAC              CCATGCC TCC GGGGTGG              TGATTAAAAATGAGA  46 362
        rclR 1773133 .. 1773146 +  -2.4  -3.19192   TTTTTAAATAAAAAT               GCAA ACTAAA TTGC                TTCAATTAAATAAAA  44 165
HHJ42_RS08440 NONE
HHJ42_RS08445 NONE
HHJ42_RS08450 1776466 .. 1776492 +   -11  -3.66178   CAGCTCTTCTGTAAA         TATCCTGACATT AAT AATGCCAGGATA         TTTACAGTTAAAAAG  83 139
        betT 1789410 .. 1789435 + -15.5  -4.23281   TGTTATTGCATAAAA         CCGCGCCATGT CTGC ATATGGCGCGG          TTTCTCTTACCTCTT 100 42
        pdeL 1792782 .. 1792798 +  -3.7  -5.15634   ATCCCCGTTAATATG              CCATTTG GCG CAAATTG              TTTTTTAATCCACTG  79 113
HHJ42_RS08525 NONE
HHJ42_RS08530 NONE
        fdrA 1797780 .. 1797803 +  -4.6  -4.25283   GCTGGAGCGCATTAT          CCAGTC-GCAT CCG GTGCTGATTGG          TTTTGATCAGGCGAT  64 245
HHJ42_RS08545 NONE
HHJ42_RS08550 1801688 .. 1801707 +  -3.4  -3.29074   TATCACACTTATAGG            CGCTCGCC TTAT GGGGAACG             TTGCTGCTCTGTTTC  48 240
        yahK 1802937 .. 1802974 +  -8.5  -2.63102   GGTTTAACATATTAA   CTTCGCTCCACTTAACT TTTT AGTTAAGGAGAGCGAAA    TAATATCAAAGTAGT  63 62
HHJ42_RS08570 1804964 .. 1804983 +  -2.8  -4.07568   GGATAAAGCGTTCGC            GCTGCATT CGGC AGTTCAGC             TTTTCAGCCGCCGCC  56 111
        prpB 1807736 .. 1807749 +  -3.7  -3.30124   ACCGATGCCTGATGC               GCCGC TGAC GCGAC                TTATCAGGCCTACGA  50 66
        prpC NONE
        prpD NONE
        prpE 1812488 .. 1812501 +  -8.1   -3.4252   GCAGATGCCTGATGC               GACGC TGAC GCGTC                TTATCATGCCTACAG  67 78
        codB NONE
        codA 1815509 .. 1815526 +  -2.7  -4.37092   AACGCCAGCAGCCAC             GACGTTT GGTG GAATGTC              TTTTGTGACGACACT  62 242
HHJ42_RS08635 1822511 .. 1822550 +   -12  -3.11704   CGGATAAGGCGTTCA  CGCCGCATCCGGCAGCCG TGCG CAGATGCCTGATGCGACG   CTTTTCGCGTCTTAT  81 122
        tauA NONE
        tauB NONE
        tauC NONE
        tauD 1832700 .. 1832710 +  -2.4  -3.14564   ACCATCAGGCAGTCT                 GCGC CCT GGGC                 TTCATCCAGCAGTGA  43 318
HHJ42_RS08700 1836976 .. 1836999 + -15.4  -3.14132   ATTTAATCTAAATAA          TGCCCGTCAA GGAT TTGACGGGCA           TTACTGCAAAGGACG 100 67
        iprA 1837651 .. 1837678 + -11.4  -3.07816   AGTATTAATCAGGAT        GCGGGGAT-AACC AAC GGTTTATTCCCGC        TTAGCTCGGTCACCA  79 33
        sbmA NONE
        yaiW 1841497 .. 1841510 +  -5.2  -4.08394   CAAACAGGAATGTCA               CGCC AGATAA GGCG                TTTTAGGCCGCATCT  63 42
HHJ42_RS08730 1842485 .. 1842507 +  -6.3  -3.49886   GTGAAGCCAGGCAGG           GTGTTGATC TCGTT GATCACCAC           TTCGTTCTCTGGGGT  58 191
        iraP 1844203 .. 1844217 +  -4.2  -5.21459   AAAGTTGTCACGGCC               GAGACT TAT AGTCGC               TTTGTTTTTATTTTT  79 68
        phoA 1845681 .. 1845712 + -14.4  -5.63374   GGCTGAAATAAAACC      GCGCCCGGCAGTGA ATTT TCGCTGCCGGGTGG       TTTTTTTGCTGTTAG 100 30
        psiF 1846129 .. 1846162 +  -7.4  -3.86944   GATACCTGATAGTGC     TAACGGGTGAGCTA CGAAAA TGGCTCACCCGAAA      TTTCATACTTCTGCC  70 39
        adrA 1847533 .. 1847552 +    -2  -3.87815   ATTTTTGCGGAGCCC            ATTACCGC CTGA GCGGCAAA             TTTATACGCCTGGGC  54 226
HHJ42_RS08770 1848802 .. 1848818 +  -6.6  -5.64421   GGGATGTATTGAGAT              TTCCAC CTTAA GTGGAA              TTTTTTCTTTACAAT 100 91
        aroL 1849433 .. 1849443 +    -4  -4.08394   CTCTGGCACAGACGA                 TCAA TTG TTGA                 TTTTCGAGCGCCTAT  59 15
        yaiA 1849830 .. 1849847 +    -2  -2.75822   TCTTTACATTATGCA             GT-GCAG GTCTG CTGCTAC             GCTTTTTGTCATTTG  40 171
HHJ42_RS08785 1850608 .. 1850619 +    -3  -4.18018   CGGCTGGCTGCGGAA                TTAC TGAT GTAA                 TTTTGCGTGACAGCC  58 14
        ppnP 1850997 .. 1851025 + -11.1  -3.56092   GCCTTCCCCTTGAAC        GGGAGGGCATTTT TCT GAAATGTCCTCTC        TTTAACCCATAATAA  81 47
HHJ42_RS08800 1851978 .. 1852007 +  -2.7  -2.55015   GGAAGCCCTGTGCCG       TGCTGCCGGAACG TACC CATTCGGTCAGCG        TCAGTTCAATCGGGT  40 465
         mak 1853598 .. 1853612 +  -7.1  -3.30124   TATCATGCCTGATGC               GACGC TTGCC GCGTC               TTATCAGGCCTACAA  63 60
        phoB 1860365 .. 1860392 +  -7.6  -3.68962   CAACCCGCTTTTAAG        GCCTTGCTCATC GGAC GTAGAGCAGGGC         TTATGATTTCTTAAC  67 27
        phoR 1861743 .. 1861764 + -13.1  -4.88918   CATCTTTTATTGCCA           TAAGCCAGC CGAT GCTGGCTTA            TTTTCTTTGCAGTCG 100 52
        brnQ 1863464 .. 1863487 + -15.3  -5.64304   GAACATTTGTTTTAA          CCACGGGGC TGCGAT GCCCCGTGG           TTTTTTATTGTGTTG 100 47
        proY 1864908 .. 1864936 + -14.6  -3.03338   CCTTGCGTTCTGTAA        GCCGGTTCAGGA GGAAA TCCTGATCCGGC        TATTCCGAAAGTTAT  89 42
        queA 1868601 .. 1868625 +  -6.3  -2.92667   AGGCAATTAATGAGC          GCGTTGGGGAG TAA TTCCGCGGCGC          TGGTTTAAACGTTGG  55 12
         tgt NONE
        yajC NONE
        secD NONE
        secF 1873033 .. 1873052 +   -10  -5.90981   AGCTGATGTTGAAAA            TCCCGGTC AGAA GATCGGGA             TTTTTTTTGATGTAA 100 50
HHJ42_RS08885 1873493 .. 1873513 + -11.2  -3.33261   AGAAGTGATAAAAAA            TGCCGGAT ATGAA ATCCGGCA            TTCTCACAATTAGAA  83 33
        nrdR NONE
        ribD NONE
        ribE NONE
        nusB 1877957 .. 1877997 +  -7.7  -5.51612   AAAAAGTAATATCCA GGCCGGTAGATTCACGGAA GACCG TTCCATG-ATC-GCCGGCC TTTTCTTTTTTATCT 100 32
        thiL NONE
        pgpA 1879509 .. 1879551 +   -12  -2.73829   TGTCGTAGTTGTGCA CCGATGCCTGATGTGACG CTTGTCA CGTCTCATCAGGCCTCGA CTCTTATTTAAATCC  79 33
        thiI 1885280 .. 1885303 + -15.4  -3.55444   AATATGTGGTTGTAA          CGTCGCATCT GGTC AGATGCGACG           TTTACCGCATCCGAC 100 39
        yajQ 1887471 .. 1887488 + -12.7   -4.1413   AGCTATTGATTGTCA             GGGCCAC CGTG GTGGCCC              TTTTGACCATGTGTT 100 53
        bolA 1901142 .. 1901155 +  -9.5  -5.23292   AGATTTTATGAAAAA               CGGCC TGCG GGCCG                TTTTGTTTTGTCTGG 100 84
         tig 1902760 .. 1902783 + -12.4   -5.9873   TAAATTCGCACAAAG          GCCCGTCACC GCCA GGTGGTGGGC           TTTTTTTTGTCATGA 100 60
        clpP 1903600 .. 1903617 +  -4.7  -2.96274   TCGTAATTGATGCCA             GAGGCGC AACT GTGCCGC              TATACTTATCCAGGG  48 31
        clpX 1905028 .. 1905046 +   -11   -4.3623   TTAGTTAACCAAAAA             GGGGGGAT TTT ATCTCCCC             TTTAATTTTTCCTCT  90 59
         lon 1907569 .. 1907598 + -13.6  -5.72616   CACTAATAAAAACAG       GGCTGGCAGGCT AATTCG GGCTTGCCAGCC        TTTTTTTGTCTCGCT 100 58
        hupB 1908053 .. 1908072 +   -10   -5.7827   GTGACGAAGTTCAAG            GGCGCATC TACT GATGTGCC             TTTTTTATTTGTATT 100 61
        ppiD 1910129 .. 1910144 +  -8.2  -4.35524   GCTGTAACAAGAAAA              GGTCGC TTTC GCGGCC               TTTTCCATTTCCGAA  79 74
HHJ42_RS09055 1910639 .. 1910661 + -10.7  -2.96452   TTTTGCCAGACTGAA           GAGGTCATA CCAGT TATGACCTC           TGTACTTATAACAGT  75 62
        fadM 1911482 .. 1911508 +  -9.4  -4.21194   GGAGAAATCCGTTTC         GCAGACGCCG GTAATTA CGGCTTCTGC         TTTTACCTGATACGC  82 401
         cof 1914554 .. 1914569 + -11.8  -5.86332   AGATCCCTTCCAGCA              CCGGGC AATT GCCCGG               TTTTTTTTGCGTTGA 100 43
        decR NONE
HHJ42_RS09085 NONE
HHJ42_RS09090 1918760 .. 1918783 +  -8.9  -4.68645   GGTGCAAAAATGTAA          CGCACTGTG CACTGT CATAGTGCG           TTTTCATTTTCAATC  90 62
        glnK NONE
        amtB 1920575 .. 1920601 +  -7.3  -5.68023   AAGCACTGCAAAAAA        CAGCCGGACGGT TTTC ACC-TCCGGCTA         TTTTTTTAATTGTGA 100 42
HHJ42_RS09110 1922268 .. 1922287 + -13.6  -3.27298   ATTAAGCGAAGTTAA            CCCTCTCC GCCC GGAGAGGG             TTAGTAGTTCCAGCG  93 36
         ffs NONE
HHJ42_RS09125 1923791 .. 1923809 +  -5.2  -5.02074   TAGTGATTGATCATT             TCACGCAG CAA TTGCGGGA             TTTTTTCCGAGGTGA  80 485
        acrR 1932729 .. 1932746 +  -9.9  -2.51951   AACCCTGAATCTGAC             TCCAGGA ATTT TCCTGGA              CATTTTCGTCGTTGC  68 39
        mscK 1936646 .. 1936660 +  -9.2  -3.18681   CAGCGCATGGCGGCA               GCGTGC CAG GCGCGC               TTCATAGGCTTCCAC  67 466
HHJ42_RS09185 1937600 .. 1937617 +  -2.6  -4.07568   GCAATTATTGCGTAC             AGCCAG TACATT CTGGCG              TTTTCGAGCACAGGC  56 59
         apt 1938322 .. 1938346 +  -9.9  -3.09492   CACAAGATGTGCATT          CAGCCTCGCCG TTC TGACGGGGCTG          TGTTAGCATTACCCC  71 77
        dnaX 1940332 .. 1940348 + -10.9  -3.25015   TCCGCCCCATTTGAT              CGTAAGC ACA GCTTACG              TTCGTCATCCTTAAC  78 27
HHJ42_RS09200 1940692 .. 1940705 +  -2.3  -2.64099   ATGCAGCTGCCGCCT               GGCTT TAAG ATGCC                GTTCTGATGCAAACC  39 5
        recR 1941326 .. 1941343 + -11.3  -2.55818   TTTTTAAGCAAACGA             GAGCAGG ATCA CCTGCTC              TCGCTTGAAATTATT  77 34
        htpG 1943307 .. 1943334 + -15.7  -5.62288   GGTTTCCTGATGTCA        TGCCGGATGAC CTTCGT GTCATCCGGCA         TTTTTCTTTTCTTCA 100 31
         adk 1944142 .. 1944157 +  -3.2  -2.83894   TCAAGCCGCCGCAGA              TCTGCT CTCG GGCAGG               TCTGCTCATCCTCCT  44 41
        hemH 1945232 .. 1945256 +  -2.8   -4.3129   CTAAAGAATCGAGCA         CCGTCG-CG TAGAGCAT CGTCGGCGG          TTTTCATCATCCGTG  62 37
         gsk 1947637 .. 1947668 +  -8.6  -4.56914   TATCGTCGGTTCGTA      GGCCAGATAAGGCG TTCA CGCCGCATCTGGCA       TTTTGCTTTCAATGC  87 43
        ushA 1952928 .. 1952939 +  -2.2  -5.24129   GGGGGCGTCGATAAT                CGTT GGCA GACG                 TTTTTTCTGCCCCAG  79 200
HHJ42_RS09260 NONE
HHJ42_RS09265 1955307 .. 1955317 +  -6.8  -3.36273   AGATAAACGCACCGA                 GCAG GTT CTGC                 TTCATGTTGCGCAGC  59 253
        glsA NONE
HHJ42_RS09280 1960140 .. 1960150 +  -3.2   -3.4298   GTATAACATCTCTCT                 GTGC GCA GTAC                 TTCCTGTATTATTGT  50 35
        cueR 1961091 .. 1961103 +  -5.5  -4.67353   CGCCTGGGCATGTTG                TGCGG CTT CTGCA                TTTTTAAATGCCTGC  75 454
HHJ42_RS09305 1963505 .. 1963535 + -10.4  -2.87931   AAAGTATGGGTAAAG       GCCGGGAAGAGTAA TTT TTCCTCTACTCGGC       TATATGCCGGATGCG  72 12
        fetA NONE
        fetB 1966585 .. 1966618 +   -19  -2.81547   GAAGAAGAAATGATG     CAATGCCGGATGCG CAGCAT CGCATCCGGCGTTG      TGGTTCATGTGCCGA 100 28
HHJ42_RS09345 NONE
HHJ42_RS09350 1972134 .. 1972165 +   -10  -2.57564   TTTCGAAATTTTGTA      GGCCGGATAAGGCG TTCA CGCCGCATCCGGCA       GTTGTGCGCCGATGC  70 109
        allA 1975071 .. 1975081 +  -3.2  -4.18197   GAAAGTATTCCTGAA                 CAGG AAC TCTG                 TTTTGCGTGACGCCT  60 5
        allR 1975997 .. 1976014 + -12.7  -5.40474   TAGTGTCTGTCGTAT             CCCGCTC TGCG GAGCGGG              TTTTTTTGACAAAAT 100 38
         gcl NONE
         hyi NONE
        glxR 1979707 .. 1979720 +  -2.5  -5.67711   AAGATGTTGCTTCAG               TATTA AAAA TAATA                TTTTTATTTTATTTG  89 110
HHJ42_RS09390 NONE
        allB 1982681 .. 1982701 + -10.4  -3.36671   AATCTGGCCCTGCAA            TGCCCGTC CTTGT GGCGGGCA            TTCTCCGGTTAAGGT  76 39
HHJ42_RS09400 NONE
        glxK 1985209 .. 1985228 + -10.8  -5.47821   ATTACCTTTAAAGCG            GATGCGAT TTAT ATCGCATC             TTTTTTTACCTGAAT 100 43
HHJ42_RS09425 1990383 .. 1990396 +  -3.1  -3.60098   AATAAAAAACTGGCT               CGTTT ATTA GAACG                TTTGCAATAAGGGGT  51 2
HHJ42_RS09430 NONE
HHJ42_RS09435 NONE
HHJ42_RS09440 1993430 .. 1993443 +  -6.7  -3.30124   CATCCAGCCTGATGC               GATGC TGGC GCATC                TTATCAGGCCTACAG  61 64
        cysS 1998623 .. 1998646 + -16.8  -3.46602   GTAATTGCGCTATTG          CCGGATGCGA GTTT TCGCATCCGG           TTATCGTCTGCGCCA 100 37
HHJ42_RS09490 2001117 .. 2001138 +  -7.2  -4.13341   AGAGGCGGTATCGTT           CAGCGCCA CACCAA TGGCGCAG            TTTGATTTGCTATCT  72 439
HHJ42_RS09500 2001706 .. 2001758 +    -7  -5.08824   TCAGAGAGTAATCAT TGGGATTATGCCGCAGCACG-TCGT GCGC AAGAACGTGCTGCGGCTGGATGCTA TTTTTTCCCTGAAGC  84 30
        cusC NONE
        cusF NONE
        cusB NONE
        cusA 2018908 .. 2018922 +  -5.6  -2.66335   AATAAAAGCAGGATA               CCCGGT TTA ACCGTG               TGGATTGTGTCTTGC  50 36
        pheP 2020420 .. 2020446 + -10.9  -5.65513   GTCAACCATCCGAAA         CCGCTCTCATC CATTC GATAAGAGCGG         TTTTTTTAATTACTG 100 70
        hokE 2025093 .. 2025122 + -20.1  -4.23781   ACCTGCTTTACACTT       TCGCCCGCAGTCA GAGA TGGCTGCGGGCGA        TTTCGTTTTACTGGC 100 97
        hokE 2025594 .. 2025629 + -16.2  -2.60032   GGCACCTGCTTTACA    CTTTCGCCCGCGGTCA GTGA TGGCTGCGGGCGAAAC     CATTTTTACCAGCAG 100 94
HHJ42_RS09640 NONE
HHJ42_RS09645 2036600 .. 2036621 + -10.1  -3.61232   TTACCCGCCAGATAA           CCCGCATGC GGCT GTGTGCGGG            TGTTTATCTGCCAGG  78 42
         fes NONE
HHJ42_RS09665 NONE
        entF 2045218 .. 2045252 + -11.8  -3.23149   AATTTATATTATCTA     TAAACCCATAATTA CAGAAAA TAATTATGGGTTTA     TCATTTGTTTAATTT  83 40
        fepE 2046680 .. 2046700 +  -3.9  -4.27316   CAGTGACAATCTCCT            TCGGTGCTC CCT GAGCAACAA            TTTTCCCTTCCCGCA  62 153
        entS 2051093 .. 2051111 +    -3  -4.15249   TATAGACGATGGCAG             TGACCGGC TGC GGCGGTAA             TTTGATTTGCTCTTT  60 403
        entC NONE
        entE NONE
        entB NONE
        dhbA NONE
        entH NONE
        cstA 2059048 .. 2059068 +    -9  -3.11024   GTTGATAGCAATTAA            GCCCTCTT AATTC AGGAGGGC            ATTTGTATTACCGGA  68 95
HHJ42_RS09735 2059563 .. 2059581 +  -6.6  -3.53012   TAGGCGACTTTGGTG             CCGTGGAG AAA CTTCTCGG             TTTGCGGCAAAACGG  61 300
        ybdL 2061683 .. 2061717 +  -7.2  -3.90112   CCAGGCGCGGGAAAA     TTGACGGTCGGCAA ACAACTC TTGCAGGCCGTTAA     TTTGCTTCAGGCGCA  70 53
        ahpC 2066477 .. 2066496 + -13.6  -4.63218   AATTCACCTAATTCT            TCGGGTGC TGCG GCACCCGA             TTTTCTTCCCCGCAC 100 89
        ahpF 2068180 .. 2068203 + -13.1   -5.5074   ACCTGTAATTGCTTA          GCCGCCGGG GTCAAA CCTGGCGGC           TTTTTTATTGCATTA 100 56
        dpiB NONE
        dpiA 2080049 .. 2080071 + -13.4   -2.6955   GGGTGACATGATAAA           GCCGGAGGAA ACT TGCCTCCGGC           ATTACTATTTACTTG  85 35
        pagP 2082745 .. 2082761 +  -7.3  -4.02302   GGTGTACTGGTAACC              GACACAG CAT TTGTGTC              TATTTTTCATGTAAA  72 158
        cspE 2083020 .. 2083036 +  -9.4  -6.11019   AGCAAGAATTCAAAA              CCCGCT TAATC AGCGGG              TTTTTTTTGGTTTTT 100 49
HHJ42_RS09860 2084295 .. 2084308 +  -6.7  -3.91801   TAAACAACCGTCGCT               TTGCG CCGC CGCAA                TTATTATGATGTTTT  68 3
        tatE 2084695 .. 2084712 + -11.3  -5.24129   TGTTCGATACAAAAA             CCCGCTT CAAA AAGCGGG              TTTTTTATCAGACAG 100 71
HHJ42_RS09945 2100562 .. 2100572 +  -5.4   -3.5044   AATCAACAACCGTCA                 TACC CTG GGTA                 TATTTCCCTTGTGTT  56 189
HHJ42_RS09975 2107076 .. 2107094 +  -3.1  -3.96327   TAATCATGCCCCAGA             GCGTGTT GAAAA AGTACGC             TTTATCCTACAAAAT  55 56
        ubiF 2114234 .. 2114249 + -10.4  -5.22312   GCAGAAAAGCAAAAA              GCTCGC CGAA GCGAGC               TTTTTTAATGTGGCT 100 154
        nagE 2123633 .. 2123655 + -15.6  -5.71712   ATCCAACAATAAAAA           GCGGCAGGGA TCT TCTCTGCCGC           TTTTTTTGTCTGAGA 100 76
HHJ42_RS10105 NONE
HHJ42_RS10110 NONE
HHJ42_RS10115 2132700 .. 2132713 +  -2.3  -3.27525   TAAATGCGTCAGGCT               GGCGA CGTT TGGCC                TTACGTTTCCAGCGC  44 77
        glnS 2134596 .. 2134612 + -11.5   -5.4588   GCAAATTATCCCAAA              CGCCGCG CTC TGCGGCG              TTTTTTCTGCTTTTC 100 89
        chiP 2136384 .. 2136413 +  -7.8  -3.59627   CCATCTTCTGATGCC       CGACGCGGCAGGT TTTGT GCCTGCCGCA-CG       TTTGAGGAATTTGCT  69 30
HHJ42_RS10130 2136802 .. 2136819 + -11.3   -4.5442   CCCTTGTATAAAAAA             GCCAACC TGCA GGTTGGC              TTTTCTCGTTCAGGC 100 72
        seqA NONE
         pgm 2141857 .. 2141876 + -11.4  -5.41359   ATCAAATAAGAAAAA            GGGCGGTC GGAA GATCGCCC             TTTTTTGCTTTGCTT 100 45
HHJ42_RS10215 2154403 .. 2154434 + -17.4  -5.04385   AACATGACGTTTAAA      GAAAACCGCCGGTG GAAA CGCTGGCGGTTTTC       TTTTTTCGGCGTCTA 100 47
HHJ42_RS10220 2154967 .. 2154981 +  -4.2  -2.54745   GCCGCGTGTGATTAA               CTTGCG CCA TGCAGG               AGTTTTATGACTACC  44 1
        phrB 2156457 .. 2156472 +    -6  -3.92522   GGCTTATTAAGACTC              CAGCGC CAGC GCGCGG               TTTCTGAACTTAAGC  66 76
        ybgI 2158966 .. 2158978 +  -2.6  -2.94076   TCAGAGGGATCGAAA                GTGC AACGA GCGC                GTTGTTATCTGATAG  42 48
        pxpB NONE
        pxpC NONE
        pxpA NONE
         nei 2162361 .. 2162391 +  -2.4   -3.9941   ATCGACAGCAGGATT       TGTGGCAGTGGGCG CAA TGCCCGCAGTAATA       TTTGCTTATCGAAAC  54 287
        sdhC 2166176 .. 2166189 +  -3.1  -2.78384   CGTGCTTTCACTTCT               CGCAGG AGT CCT-CG               TATGGTAAGCAACGC  43 4
        sdhD NONE
        sdhA NONE
        sdhB 2169055 .. 2169101 + -10.7  -2.57931   CAGGCCTGATAAGAC GCGCAAGCGTCGCATCAGGCA ACCAG TGCCGGATGCGGCGTGAACGC CTTATCCGGCCTACA  74 44
        sucA NONE
        odhB 2173598 .. 2173611 +  -8.1  -3.30124   ATCGAAGCCTGATGC               GACGC TAAT GCGTC                TTATCAGGCCTACGG  65 98
        sucC NONE
        sucD 2175898 .. 2175915 + -11.3   -5.4505   GGTTTCGACATGGTT             GGCCATC TTAT GATGGCC              TTTTTTATTCGGGCA 100 101
HHJ42_RS10320 2177392 .. 2177404 +  -3.5  -3.80573   TACTGAATTATCGAC                TATTA CTT TAATA                TTTAGTGATCGTAAA  53 396
        cydB NONE
        cydX NONE
        ybgE 2181672 .. 2181697 +   -12  -4.63184   AATTCTCTTTAAAAA         TTTATGGGCC GAGTCA GGCCCATAAA          TTTTTACGCTCCCTT 100 46
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA 2184613 .. 2184626 +  -2.3  -2.70544   GGTCAACATCAGGCA               CCGGT TGCC ACGGG                GTTCTGGTAGTTTTG  40 63
        tolB NONE
         pal 2186562 .. 2186573 +  -2.2  -2.52896   GGTTTACTAAGAGAA                TTGC ATGA GCAG                 TAACTTCAGACATCA  39 31
        cpoB 2187369 .. 2187396 + -10.7  -2.79302   GTAATGCATAACACA        CGACCAGAAGT CGCATT ATTTCTGGTCG         TGTCGTGCGAATCAT  74 37
HHJ42_RS10380 2187598 .. 2187610 +  -6.3  -3.46602   CTGCACGACCCACCA                CTAAC ATA GTTAG                TTGTAGTATCCAGCG  60 26
HHJ42_RS10385 2187703 .. 2187716 +  -2.3  -3.10409   CGATCCCGTCATCAC               CCACC ACCG GGTCG                TTAGCTCAGTTGGTA  42 20
HHJ42_RS10390 2187780 .. 2187800 +  -5.4  -3.06302   TCGAATCCTGCACGA            CCCACC ACTGATTAC GGTGGG            TTCGGTGGAAGTAGT  52 19
HHJ42_RS10395 NONE
HHJ42_RS10400 2188027 .. 2188051 +  -3.6  -2.56596   AGTAGAAATCTTTCA         GGTAAC-ACCC GTAT GGGTCGTTAGC          TCAGTTGGTAGAGCA  42 60
HHJ42_RS10405 NONE
HHJ42_RS10410 2188228 .. 2188258 + -18.5   -3.0395   GCACGACCCACCAAT       GCAAAAAAGCGCC CTAAA GGCGCTTTTTTGC       TATTCAGGCATCTCT 100 28
        nadA 2189558 .. 2189571 +  -3.8  -3.53224   ATAATTGATAATAAG               GCGT CACATT ACGC                TTTGGGGGAACGATG  52 37
        pnuC 2190407 .. 2190429 +  -6.3  -2.62184   GCTCAATCTGATAGT           GATCCATCA GGTAG TGTTGGATC           TGATCTAACAAGGCA  50 129
        aroG 2193114 .. 2193143 + -12.9  -3.14132   GGTAAAGTTTAATTG       TCGGATGCGCCGT CAGA GTGGCGTATCCGA        TTAATCACCGGAGGC  91 36
        acrZ 2201361 .. 2201378 +  -8.4  -5.35224   CATTGATTCCCTGAA             TGCCCG CTTAGT CGGGCA              TTTTCTTTTTCTCAA 100 35
        modA NONE
        modB NONE
        modC 2204398 .. 2204418 +  -4.6  -3.53012   GGGCGAACTTCCATA            CGGCGTTA ACTTG TTGCGCCG            TTTCAGCCAGAGAAG  53 382
         pgl 2206023 .. 2206046 + -15.3  -3.10053   TAACCGCTGATTTAC          CCGGCGCAG TCTCTT CTGCGCCGG           TGTATTAACCTATCT  93 38
HHJ42_RS10510 NONE
HHJ42_RS10515 2209893 .. 2209916 + -13.2  -2.89055   TCCATTTATTATCTT          TCTGCGCACT TCAC GGTGCGCAGA           TATCTGGAGCATTTG  86 169
HHJ42_RS10520 2212252 .. 2212300 +  -9.5  -3.53811   GATGCGATGCTGGCG CATCTTATCCGACCGACAAATCG TAT CGAACTGTAGGCCGGATAAGGCG TTTACGCCGCATCCG  75 84
        tnpB 2215910 .. 2215922 +  -9.1  -3.78775   GCCAGATTCAAGAAT                CGCCA GGC TGGCG                TTTGCTGCTGCGCAG  76 451
        bioB NONE
        bioF NONE
        bioC NONE
        bioD 2220965 .. 2220980 +  -3.2  -4.52589   TTGCTTTGGGGATAA              C-CCGGT AAG GCCGGAG              TTTTATCTCGCCGCA  64 416
        uvrB 2223182 .. 2223208 + -16.7  -3.05844   GTCGTGACAAGATGA         CGAAGCCGGAA TATTC TTCCGGCTTCG         TGTTAACCTAAAGCC 100 34
        moaA NONE
        moaB NONE
        moaC NONE
        moaD NONE
        moaE 2227228 .. 2227258 +  -3.8  -3.55761   CTGGTAGTTTATTGT       TAGCCGGATAAGGC ACC GCTGCGTCCGGCAA       TTTCACCGCTCAGTA  52 34
HHJ42_RS10600 2228080 .. 2228098 +  -8.1  -5.95946   TTTTCATCATCAATA             TCCCGGC CATGT GTCGGGA             TTTTTTTCTTATTAA 100 45
HHJ42_RS10625 2232903 .. 2232913 +  -8.2  -3.57971   GTGGCGACAATTAAT                 GCCG GTA CGGC                 TTTGCCGATGAATAT  69 417
        rhlE 2239824 .. 2239853 + -13.5  -2.71712   TGCATGTTTTTGTAG       GCCGGATAAGGCG CTCG CGCCGCATCCGGC        ATTTCACAACAAGCA  86 145
        dinG 2242374 .. 2242387 +  -9.5  -3.25223   AAAACGAAATCCCCA               CGCCG TCGG CGGCG                TTAATGATGTGAGTC  72 8
        ybiB 2243393 .. 2243416 + -12.5  -4.07568   TTAATTTTTATCTCA          GCCGGATGA GCCATG TCATCCGGC           TTTTACCCCACCGCA 100 37
        rlmF 2250846 .. 2250857 +  -4.4  -4.21676   CCAATAACCAGCCCG                CGAA TTTC TTCG                 TTTTCCATCAATTCT  64 269
HHJ42_RS10740 NONE
        ompX 2258187 .. 2258204 +  -9.1  -6.09196   TCGGTGATATAAAAA             TCCGCCT CTCG GGGCGGA              TTTTTTTGTTTTAAG 100 46
        mntR NONE
HHJ42_RS10765 2261985 .. 2262003 +   -11  -4.13183   CTGTCAAATTAAAAA             GGCGGATT ATG AGTCCGCC             TTTGCTTTACGTTTT  86 44
HHJ42_RS10775 2264964 .. 2264977 +  -3.9  -4.07568   GCGATAATCAAAGAT               TAAAC GGCG GTTTA                TTTTCCAGCACCGCC  59 233
         fsa 2270211 .. 2270242 + -10.1   -4.0075   TACATCACGATTTTC      CCGCTGGCTGGTT TGCCAT AACCTGCCAGCAG       TTTGATTGCTTCCAT  83 189
        iaaA NONE
        gsiA NONE
        gsiB NONE
        gsiC NONE
        gsiD 2278592 .. 2278604 +  -3.4  -2.58398   CCTCACAGGAAATTA                TTGC CCTAA GCAA                GTGTTGTAACTTTCT  42 73
HHJ42_RS10835 NONE
HHJ42_RS10840 2282418 .. 2282443 + -13.3  -2.60244   TAATCATTATTCGCA         GGCCGGACAAA TGAT TTTGCCCGGCC          TGAATTAATTAAACC  84 38
        bssR 2284381 .. 2284401 + -12.6  -3.48703   AGGCCTGAAAACTAA            GGGGGAGA AAGCG TCTCCCCC            TTCATGTTTAAGTTT  93 33
        yliI 2285954 .. 2285975 +  -2.9   -3.3581   GCTTCCGCACGACGT           GCCGGTG AGTCGATC CACAGGC            GTTTTTGCCCGTACT  47 380
        dacC 2287682 .. 2287706 + -13.6  -3.39862   TTAATCTTCTGATAA          CCGGATGGCG CGAAA CGTCATCCGG          TTATACGTCATTAAT 100 37
        mdfA 2290652 .. 2290678 + -13.1  -3.37464   CGAAGGGTAAAAAAA         TGCCTGATTGC TTTGT GCGATCAGGCA         TTCTCGAATTAATGG  95 31
        rcdA 2293786 .. 2293833 + -11.4    -2.924   AACAATAAGTTAGGT TGGTGGTCAGTGGTGGTTATTAC GGG GTAATGCCAACCGCTG-CCGCCA CTTTGTCGCCACTTG  78 111
HHJ42_RS10920 NONE
HHJ42_RS10925 NONE
HHJ42_RS10930 NONE
HHJ42_RS10935 NONE
HHJ42_RS10940 NONE
HHJ42_RS10945 NONE
HHJ42_RS10950 NONE
HHJ42_RS10955 2301085 .. 2301100 +  -2.6  -3.92001   AGCGTAAAAAAAACG              TTTTAC ATCA GTAAGA               TTATTATATACTGTA  54 95
HHJ42_RS10960 2301347 .. 2301364 +  -3.4   -4.4017   AACCGCTCAATGGAT             GTCATC AGCTGA GGTGAC              TTTTATGCGCATTGA  62 14
HHJ42_RS10965 2301738 .. 2301757 + -11.4  -4.20084   ATCGTTTTTGCTAAG            GCCCGCCA GAAC TGGTGGGC             TTTTGCGTAGATCAT  93 161
HHJ42_RS10985 NONE
HHJ42_RS10990 NONE
HHJ42_RS10995 NONE
HHJ42_RS11000 2309663 .. 2309679 +  -2.1  -3.54653   GGTGCAGGATGCGCC              GCACTGC ACA GTGGAGC              TTATCTGATGAAAGT  47 1
HHJ42_RS11005 2309873 .. 2309887 +  -2.8  -2.59927   ACCACCGTGCAGACC               GTCC AGCTATG GGAC               TGAATTATGACGCTT  40 8
HHJ42_RS11010 NONE
HHJ42_RS11015 NONE
HHJ42_RS11020 2310973 .. 2311006 +  -5.4  -2.82895   ATGGCGCAACAGGTA    G-CAGCATGAACCGGT TGCT GCTGGT-CATGCTGGC     GTTATTACTGGCGGC  50 17
HHJ42_RS11025 2311442 .. 2311453 +  -7.2  -2.87132   TGGATGAAACGGAGG                CCGC CTGG GCGG                 TCTGTGCAGACAAAG  59 61
HHJ42_RS11030 NONE
HHJ42_RS11035 2312839 .. 2312851 +    -2  -4.31895   ATTTCTTTTTGGTTA                TTCT CTTTT AGAA                TTTCTTGGTATATAT  60 495
HHJ42_RS11045 NONE
HHJ42_RS11050 NONE
HHJ42_RS11055 NONE
HHJ42_RS11060 NONE
HHJ42_RS11065 NONE
HHJ42_RS11070 2317707 .. 2317734 +  -7.7  -3.09581   TGCTTCTGCCGCGCC        TACTGCGGCGC TATGCT GTGCCTCAGTA         TCTGTTACCCATTTC  59 204
HHJ42_RS11085 2319231 .. 2319245 +    -5  -3.35679   ATGAATCCCCCTGAA               TCAGCA TTA TGTTGA               TTATCCCTGCAAGCA  54 27
HHJ42_RS11090 NONE
HHJ42_RS11095 2321059 .. 2321069 +  -3.2  -2.98823   CGCACCGCAACGCCC                 TCGG CCT CTGA                 TATATCTGAACGGCG  45 15
HHJ42_RS11100 2321439 .. 2321459 +  -8.3  -4.65895   TGACGGTTGACGATC            TGGTGGC AGATATC GCCACCA            TTTTTCACTGGCCGC  89 38
HHJ42_RS11105 NONE
HHJ42_RS11110 NONE
HHJ42_RS11115 NONE
HHJ42_RS11120 2326210 .. 2326226 +  -3.7  -3.20832   TTCGAAATGGAATGA              TTCTTCG CAA TGGAGAA              CTTTTAAGTTTGCAA  48 26
HHJ42_RS11125 2326504 .. 2326557 +  -7.5  -3.34222   AAATCAGGACAGGTG GCGCTCTCTCTTTGACGCTGCCGCCA TTT TGTCGCCATCGTTAAAGA-ATAGTGC TTCTAACATCATGAT  63 11
HHJ42_RS11135 2329088 .. 2329104 +  -9.4  -3.29511   GAAAAAATCAATAAA              GCCCTC AACGC GAGGGC              TTGTCAGACGATCAG  74 27
HHJ42_RS11145 NONE
        nfsA NONE
        rimK 2331471 .. 2331482 +  -3.6  -2.78216   TACGACAGAATATTG                CCTG AAAA CGGG                 TGGTTAGTCGCAATC  43 7
HHJ42_RS11160 2332061 .. 2332103 + -17.3  -2.62851   TCCACTGATAACTCC TTT-CGAGCACGCAGTCGCTG CCG CAGTGACTGCGTGC-CGCAAA ATTATCCGCTGTTTT 100 33
        potF 2333573 .. 2333589 +    -3  -3.05384   CAATTCGCACCATCA             TG-GTGC GCTT GCACACA              TTCAATGCCGGAGAG  43 83
        potG NONE
        potH NONE
        potI 2336578 .. 2336602 + -12.2  -4.25104   GCCAACCTGGCTACA          TAATGCCGCG CATGT CGCGGCATTG          TTTTCATGGAAGACG  95 55
HHJ42_RS11185 NONE
        rlmC 2338269 .. 2338282 +  -9.5  -3.98172   TGAAGCAATAAAAAA               GCCGC AGGT GCGGC                TTTCTGAATCTTACT  81 30
HHJ42_RS11225 NONE
        amiD 2344260 .. 2344288 +    -8  -3.68619   TCAAAATTCAACTTG        GAGACGCCGTAG TGGGT CAGCGGCGGCTC        TTTAGCTGACTTGCG  66 158
HHJ42_RS11275 2356362 .. 2356411 +  -6.6  -5.14965   AACATCGTGGCCATT TGTGGCTGAATAGCGTCGAGCATCT CAT AGC-GC-CGACGGTATTCAGCC-CG TTTTTTACTGGCGAT  90 47
        macA NONE
        macB 2360518 .. 2360538 + -12.6  -4.35926   TTTTTGAGATAAAAA            TGCCAGCC GATCG GGCTGGCA            TTTTGCCTTTAGGAT 100 41
        clpS NONE
        clpA 2363775 .. 2363802 + -12.8  -5.27335   TGGTAGGTTGGTGAA        GTCCGTAATCTC GTCA GGGGTTACGGAC         TTTTTATTTAGGGGG 100 51
         lrp 2371411 .. 2371440 + -13.7  -2.75577   TGTTAATCCATACAG       CAACAGTACTGGG GTAA CCTGGTACTGTTG        TCCGTTTTAGCATCG  86 82
        ftsK 2375494 .. 2375523 + -12.1  -3.32698   TTAATGCAACGTAGA       CCGGATAAGACGC GATA GCGTCGCATCCGG        TATTCTATCAACTGA  85 41
        lolA 2376256 .. 2376277 +  -2.3  -3.37634   GTAAGTAGAGGCACC           TGAGTGAGCA ATC TG-TCGCTCG           ATTTTTCGGATAATA  45 33
        rarA 2377605 .. 2377619 +    -5  -3.48053   ACGCTACCGTTAATG               TTATCG TTG CGGTAA               TGTTGTTAATGTATC  56 28
        serS 2379011 .. 2379024 +  -9.5  -5.72616   TTCTGAATCTAAAAA               GCGCC TGCG GGCGC                TTTTTTTGTCTCCCT 100 51
        dmsA NONE
        dmsB NONE
        dmsC 2383168 .. 2383194 +  -5.1  -5.04733   GCAAGTTAATCAGTA        AC-AACCGGGGT TTCG GCCCCGGTTCGC         TTTTATTTCTGCTTC  79 32
HHJ42_RS11385 2385296 .. 2385327 + -13.2  -4.52589   TGTAAATGAATTCAA      GCAGAGTGTGAA CTTACTGT TTCACACTCTGC       TTTTCTGTGCACAAA 100 36
HHJ42_RS11410 2392636 .. 2392663 +  -4.8  -3.14132   AGGAATAATGTATTG        CCTGTGGTCG CAATTGAT TGACCGCGGG         TTAATGGCAACGCAA  52 167
        serC 2393801 .. 2393821 + -12.6   -5.4659   GAAATTTTGCATAAT            CCCCACAG CCAGC CTGTGGGG            TTTTTATTTCTGTTG 100 45
        aroA 2395180 .. 2395198 + -12.4  -5.75945   CTTTCTTTTCAAAGA             CGTCGGCA CAT TGCCGGCG             TTTTTTTTCGGACCT 100 70
        ycaL 2396185 .. 2396205 +  -8.9  -3.66784   AACGATTTGTGGCGT            CGGCGCGTA TAA TGCGCGCGG            TTATGTTAACGGTAC  75 141
         cmk 2396947 .. 2396971 +  -4.9  -3.06696   GAATTTGCAGTACCC          CCCGTTGCAAT GGA ATGACAGCGGG          TATGTTAAACAACCC  51 47
        rpsA 2398798 .. 2398815 + -14.1  -3.18264   GTAATCAAGCACTAA             GGGCGGC TACG GCCGCCC              TTAATCAATGCAGCA  95 111
        ihfB 2399186 .. 2399200 +  -7.8   -5.4387   TTGAACGCGAGAAAA               GCACCT GTC GGGTGC               TTTTTTCATTTCTCT  95 55
HHJ42_RS11445 NONE
        msbA NONE
        lpxK 2404703 .. 2404713 +  -2.4  -4.49937   GCATGAAGCCTGCTG                 CCGC GTA GCGA                 TTTTCGTCTTATTCG  61 334
        ycaR NONE
        kdsB 2406676 .. 2406689 +  -5.3  -4.35675   ATTTTGGGAGGAGTG               TCGTA CCGT TACGA                TTTTCCTCAATTTTT  68 65
HHJ42_RS11475 2407673 .. 2407689 +  -3.6  -4.09685   AATCACTCTTGCCGT              GGCTCG CCTGA CGAACC              TTTTAGCCACTGCCA  57 15
        cmoM NONE
        mukF NONE
        mukE NONE
        mukB 2415826 .. 2415853 + -18.6  -4.57073   CTCAGGCGAGTTAAA        GAAAAGGCGGCA GCAA TGCCGCCTTTTC         TTTTTCCGAAAACTC 100 27
        ldtD 2417998 .. 2418014 +  -5.7  -3.13432   GCGATTCTCTGCAGC              CCCCGTC ACT GCTGGGG              TTGAGTCATCTTGAC  54 91
HHJ42_RS11510 NONE
        gloC 2419351 .. 2419368 + -12.7  -3.27786   AGGCGCATAAAAAAA             GCCCGCT TTCA AGCGGGC              TTCATCGGTTTTAAC  90 41
        pepN 2428179 .. 2428235 + -15.2  -3.21924   TTGTAGGCTGGATAA GGCGTTCA-CGCCGCATCAGGCAGTCG TGCC CAACTGCCTGATGCGACGCTTGACGCG TCTTATCAGGCCTAC 100 105
        pyrD 2433799 .. 2433842 + -10.6  -3.22448   CTTCAAATTCCTCTT TATAAGATAATCAGGGCT TTATTTTC AGCCCTGGTTGTTTTATA TTCATCGCTGTTGCT  78 47
        zapC 2434672 .. 2434688 +  -8.7  -3.90922   GATTTTCTAATTGCT              CCAGCAG CAC CTGTTGG              TTATTTCCACGAAAT  74 204
       rlmKL NONE
HHJ42_RS11590 2439804 .. 2439818 +  -2.8  -2.62616   TATCAGGCATGAAAA               CCAACA CTT TGTTAG               TCATCTGCAAAATAG  40 105
        pqiA NONE
        pqiB NONE
        pqiC 2443335 .. 2443361 + -10.8  -6.02919   GATTTGTAAATATAA         CCGTCTCCGGTA TGT TGCCTGAGGCGG         TTTTTTTGTTTCTAA 100 48
         rmf 2443757 .. 2443773 + -13.7  -3.75418   CTCTTTAAAAAGAAA              CCTCCGC ATT GCGGAGG              TTTCGCCTTTATATA 100 47
        matP 2446832 .. 2446847 + -11.8  -4.82901   AAGGCAAAAAAAAAA              CCCCGC AGCT GCGGGG               TTTTTCTACCAGACG 100 67
         sxy 2449600 .. 2449613 +  -3.1  -3.11634   TACGCCGAAACAGGA               GTTTC CTGC GGAAC                TTGAGTAATCTGGCG  45 4
        helD 2454501 .. 2454529 +  -8.2  -3.09327   CTGGATAATGAAGTC       TGCC-GTTGCCAC GTTG GTGGCAACCGGAA        TGTTCCATACCGTCG  62 147
HHJ42_RS11670 2456218 .. 2456245 + -17.1   -4.1673   TGGCCAAATAAAAAA        TCCCCGGAAGG CAAAAA CCTTCCGGGGA         TTTGTTCAGGGATTA 100 30
        yccX 2458257 .. 2458288 + -12.4  -5.06414   TTAGCCGGACCTTTC      GGAAACAGTCGGTA TAAA TAGCGGCTGTTTCC       TTTTTCTTCGCCAAA 100 86
        hyaA 2461316 .. 2461328 +  -7.7  -2.88249   CGCGCGATGCGTGGG                CGTTC GTT GAACG                TATCTGCGGCGTCTG  61 230
        hyaC NONE
HHJ42_RS11720 NONE
        hyaE NONE
HHJ42_RS11730 2465515 .. 2465528 +  -3.1  -3.57144   GCAATCGGCGAATAC               CTCTG GTCG TAGAG                TTTCAGGATAAAGAG  51 78
        appC NONE
        appB NONE
        cbdX NONE
        appA 2469928 .. 2469952 +    -5  -4.15106   GAGGGGATAATGAAT         CCTTTG-CCGC TTTT GCGATCAAAGG          TTTTGACAATTCCTG  64 170
        cspG NONE
HHJ42_RS11765 NONE
        ymcE NONE
HHJ42_RS11775 2471053 .. 2471085 +  -7.8  -3.79909   AAATAATGTGATTTT     GT-GAACATCACCCC GTGC GAGGTGATGTTCCGC      TTGTTGCTAATTTAG  71 30
        torT 2476223 .. 2476246 +  -3.8  -3.14132   ATACGCAGCAGACGT          TCACGGCTGAG AAT TTC-GCCGGGA          TTGGTCACAAACGCC  47 152
        torC NONE
        torA NONE
        torD 2481583 .. 2481613 +   -14  -2.73364   GTGAGCCACAAACCG       GGAAAGCCGCTGGC GCA GCAGGCGGTTTTCC       TGCTTCAGGTGCGCA  86 403
         agp 2484567 .. 2484597 +  -6.7   -2.7563   GCGGTGAAATAACAG       AAAACTCCCCCGC GTGAA GCGGGGGAGTCGC       TGGTTAAACGTTTTT  55 29
HHJ42_RS11840 2486047 .. 2486065 + -13.1  -4.84918   GTCAAAACGCCATCA             CCGCCGG TTACC CCGGCGG             TTTTCTGTTTATGGC 100 81
        rutR 2492445 .. 2492478 + -10.9  -2.61144   TTCGACCACGTTAAA     GATGCCGGAGGAGGT TGTA ACATCCTCCGGCTAC      CTGTTTAACCGATCG  74 27
HHJ42_RS11890 2496820 .. 2496846 +  -4.5  -2.62111   TTCCGGTGGCAGATA        TAACGGCAA-GT TTCG ACATTGCCGATA         ATAATTTTTTGGAGA  46 136
        putP 2498420 .. 2498450 + -18.4    -5.252   TCATAACAGGAAGCA       GGCAGAGGGCAATC AGT GATTGCCCTCTGCG       TTTTTTCTCAAAATA 100 69
HHJ42_RS11900 2499437 .. 2499448 +  -4.4  -3.34344   TGTAGCAAATACGAC                GCAA ACTC TTGC                 TTAGTTACAACATAC  52 36
        efeO NONE
        efeB 2501985 .. 2502022 +  -7.5  -4.12188   AATCGGTGCGGGTCG   GTAGGCCGGATAAGGCG TTCA CGCCGCATCCGGCAAGC    TTTTACCAGTACTGC  72 122
        phoH 2503318 .. 2503342 + -13.6  -4.33907   AGTGTATTATCGGTG          CAGAGCCCGG GCGAA CCGGGCTTTG          TTTTGGGTGTTTATA 100 40
HHJ42_RS11940 2511808 .. 2511818 +  -3.2  -5.40072   ATGCAGTTTTAATAA                 GCGA AAT TTGC                 TTTTTTTGCCACCGA  81 343
        ghrA 2512870 .. 2512891 +  -7.3  -3.05384   AATAAAGCATCTGGT           TTCCTGCTA TCCT TGGCGGGAA            TTGAATACAGGAGAG  60 39
        ycdX NONE
        ycdY 2514252 .. 2514268 +  -3.7  -3.07622   TATCACTCATAACTG              CAACGAG TAA TTTGTTG              TTGCATAAAATGTGT  47 51
HHJ42_RS11965 2514853 .. 2514871 +  -7.4   -5.4251   CTTAAACCGTAAAAT             GCCGGA TGATAAT TCCGGC             TTTTTTATCTATCAG  95 59
        csgB NONE
        csgA 2518958 .. 2518973 + -10.4  -5.75342   TCAGTATGAAAGAAA              CAGGGC GCAA GCCCTG               TTTTTTTTCGGGAGA 100 48
        csgC NONE
HHJ42_RS12005 2519848 .. 2519862 +  -5.7  -2.56181   AGAAGGTGTAAGGAG               GCGTT ATGAA AACGC               GTATTCATGTTGTGC  50 115
        ymdB NONE
        clsC 2521790 .. 2521800 +  -3.2  -3.78934   TGGCGTCGATATTGC                 CCGT GGA ATGG                 TTATTGTAAACGCGA  53 6
        mdoG NONE
        mdoH 2527570 .. 2527588 +   -11  -5.00616   ACGAGCCAATAAAAA             TACCGGCG TTA TGCCGGTA             TTTTTTACGGAAGAG 100 156
HHJ42_RS12035 2528327 .. 2528353 +    -8  -3.06183   GGGATTCGACGACGA         CGTAGACTGTTC CAT GAATAGACTGCG         TTGAATAACACTACG  59 514
HHJ42_RS12055 2531897 .. 2531923 + -10.9  -2.86618   AACAGAATAAATATC         ATTGCCGGATG CGTGC CATCCGGCAAC         ATTTCACTCTTACTT  75 31
        rimJ NONE
HHJ42_RS12115 NONE
HHJ42_RS12120 2541827 .. 2541843 + -13.7  -4.11692   ATTCGCCTCTTTCAG              CGCCTGC CTT GCAGGCG              TTTTGCCCGTGGGTC 100 88
        murJ 2543417 .. 2543441 + -17.9  -3.37245   CGGTGTAACGATACA          TTCCGGCCTGC AGT GCAGGCCGGAG          TTAATCTTCAGATCG 100 33
        flgB NONE
        flgC NONE
        flgD 2546602 .. 2546613 +  -2.2  -3.22113   CTTCACATTTCAGGA                GTCA GTCA TGGC                 CTTTTCTCAAGCGGT  44 43
        flgE NONE
        flgF 2548616 .. 2548630 +  -4.2  -2.94633   CATGACAAGTATAAG               TTGCCC TAT GCGCAA               GTTTATCGGGTCTAT  46 52
        flgG 2549551 .. 2549569 +  -8.1  -3.96337   AACTCTAAGGCTTAA             CCGGTGG CAGGT TCACCGG             TTTACTGATTTTTGA  72 33
        flgH NONE
        flgI NONE
        flgJ NONE
        flgK NONE
        flgL 2555060 .. 2555088 + -19.6  -5.54264   TGGGTATGTTTTGTC        TGCCCGCTCCGG GATCG CCGGGGCGGGCA        TTTTTTTGCCTATTT 100 67
        rluC 2560244 .. 2560274 +  -3.3  -3.92075   GCCTCGCTCAGGTGA      CGGAAATGGACGTC AAAA GGC-TCCACTTCTG       TTTGTAGATGCCCAT  55 339
        yceD NONE
        rpmF 2561558 .. 2561603 +  -4.2  -4.07568   ACCGCGGCCGCAAGG TCATCGCTAAG--TAATCACGC GTCT GCGTGATGAAGCTTAGTGAGGA TTTTCCCCAGGCAAC  59 12
        plsX 2562730 .. 2562747 +  -5.5  -3.57263   TGCGGTAGCAGGACG             CTGCCAG CGAA CTCGCAG              TTTGCAAGTGACGGT  59 33
        fabH NONE
        fabD NONE
        fabG 2565464 .. 2565478 +  -7.8  -2.62642   AAAATGCTCATGTTG               CGCGCA GTC TGCGTG               GTTATGAGTAATAAT  59 54
        acpP 2565891 .. 2565917 + -13.1  -5.02287   GGCGTAAGTGAACAT        CTCCAGGCGGTC GTTC GACCGCCTG-AG         TTTTATCTTTTTGTC 100 34
        fabF 2567237 .. 2567252 +  -8.2  -5.52096   TCCACCCTTATAAAA              GGTCCG CTTG CGGGCC               TTTTTTCTTAGCTTT 100 51
        pabC NONE
        yceG NONE
HHJ42_RS12265 NONE
        holB NONE
HHJ42_RS12275 2571607 .. 2571625 +  -4.6  -2.79098   AATCCATCCGTTGAA             TGAGTTTT TTT AAAGCTCG             TAATTAATGGCTAAA  47 27
        ptsG 2573358 .. 2573375 + -12.7  -5.04987   CGTTGGGGAGACTAA             GGCAGCC AGAT GGCTGCC              TTTTTTACAGGTGTT 100 50
        hinT NONE
HHJ42_RS12295 NONE
        lpoB NONE
        thiK NONE
        nagZ NONE
HHJ42_RS12315 2579967 .. 2579980 +  -3.9  -4.34402   TTTCAGCAACAAAAC               TTGAT TAAC ATCAA                TTTTGGTATGACCAA  64 275
         ndh 2581488 .. 2581520 +   -12  -2.60723   TGGTACGAGCGGTAG      GCCTGATAAGACGC GTTAA GCGTCGCATCAGGC      ATTCCTTCAGACTCC  79 92
HHJ42_RS12325 2582210 .. 2582236 +  -6.6  -5.43866   GTACTCTGCAATTTA         GCCCCTCA TTCGCTCAAGC TGAGGGGC         TTTTTTTGCGACTTA  91 48
        bhsA 2583418 .. 2583444 + -18.8  -5.60993   CTACTGCTGATTTTT         TCCCCGCGACAT GCT GTGTCGCGGGGA         TTTTTTTATCCGAGC 100 64
        lolC NONE
        lolD 2591365 .. 2591381 +  -5.1  -2.98947   CTGATGGGGGCGGAG              TAATGGC GAT GCCTTTA              TCGTTATTGATTGGC  51 23
        lolE NONE
        nagK NONE
        cobB 2594802 .. 2594820 +  -5.3  -2.92463   ATCATTTTCATGCTG             TTGTCCG GGATG CGGATAA             TATGTCAGTGGTGGC  49 439
HHJ42_RS12430 2603058 .. 2603083 +  -7.5  -4.24963   CTTCGCCTTCGGCAA         GGCCTTCGAAG TATT CTTCGTAAGCC          TTTTCCATGATTGTG  74 315
HHJ42_RS12450 NONE
HHJ42_RS12455 NONE
HHJ42_RS12460 NONE
HHJ42_RS12465 NONE
HHJ42_RS12470 2607030 .. 2607045 + -11.8  -2.75064   CAGAACATCAGGAGG              CCGCCC GAAA GGGCGG               TAGTTAAATGCGAAA  79 96
HHJ42_RS12475 NONE
HHJ42_RS12480 2607561 .. 2607583 +  -2.7  -3.67597   AGGATTGTAACGACA          GGCC-GAACT ATGA AATTCAGGCC           TTATTCACTGCCCCG  50 182
        hokD 2608550 .. 2608563 +  -9.5  -5.45813   CGCACCCGCACTTAA               CCCGC TTCG GCGGG                TTTTGTTTTTTCCTG 100 96
HHJ42_RS12495 NONE
HHJ42_RS12500 NONE
HHJ42_RS12505 NONE
HHJ42_RS12510 2611261 .. 2611276 +  -7.5   -5.4505   GAAGAGTTTCTACAA              CCCGC CGCCGA GCGGG               TTTTTTATTGCGGAA  95 108
HHJ42_RS12515 2611471 .. 2611491 +  -3.9  -3.07947   TGCGGGGGCGGGTCC            CCGATGGCG GTC CATTATCGG            TATTCAGCGTTGTTA  47 99
HHJ42_RS12520 2611874 .. 2611892 +  -5.3  -4.03888   TTCTGTACTCCTGAT             CGTCTTT CGGGA AGAGACG             TTATTATTCTGAATA  63 327
HHJ42_RS12525 2612430 .. 2612451 + -15.9   -4.3341   CATAGCGCCACTCTC           CAGCCCCTC TCCG GAGGGGCTG            TTTATATTGATTTTG 100 250
HHJ42_RS12540 NONE
HHJ42_RS12545 2615660 .. 2615683 +   -11  -4.37544   TAAGCCTGCGCAAGG          GACCATCGGT GTGT GCCGGTGGTC           TTTATATTGTTGTGA  90 38
HHJ42_RS12550 NONE
HHJ42_RS12555 NONE
HHJ42_RS12560 2617499 .. 2617523 +  -4.9  -4.84918   GAATAAAAGTAAAAA          CCCCGTTTGTT GGC ACCAAGCGAGG          TTTTGTGTTTCTGAC  75 120
HHJ42_RS12565 NONE
HHJ42_RS12570 NONE
HHJ42_RS12575 2618371 .. 2618385 +    -7   -3.1203   ATAAGTTTTGTTGAT               GCGCCG TAT CGTCGC               TATATTCCCTCATTA  58 37
HHJ42_RS12580 2619081 .. 2619121 +    -2  -4.80417   GCTGACGAGGAATGA TGGA-AG-AAGGCGTTGTAT GCC ACACAACGCCTCACTGTTCA TTTCTTCTTTTTCTC  66 110
HHJ42_RS12590 NONE
HHJ42_RS12595 NONE
HHJ42_RS12600 NONE
HHJ42_RS12605 NONE
HHJ42_RS12610 NONE
HHJ42_RS12615 2626052 .. 2626080 +  -4.7  -4.24342   CGCTGCCGTAACACG       TTA-TCAGGCCA CCGCGT TGGCCTGACTGA        TTTCTTAATGAAAGG  64 30
HHJ42_RS12620 2627142 .. 2627160 + -13.8  -3.66166   GAAATAATCCGTGAG             CGGGGGCG AAA TGCCCCCG             TGTCTTTTTTCACAG 100 34
HHJ42_RS12625 2627559 .. 2627580 +  -2.3  -2.87229   GCACGGAACGGCTGA           GCATGCGTGA TTT TCA-GAATGC           CTTTGATGCTGCCCT  41 16
HHJ42_RS12630 NONE
HHJ42_RS12635 NONE
HHJ42_RS12640 NONE
HHJ42_RS12645 NONE
HHJ42_RS12650 2630075 .. 2630110 + -13.2  -2.71364   ACTTTGCCCTCAGAC    TGGCGCGTGAGATGGG GAGA CCCGACTGGCGCGCCA     TGCTTGCCGGGATGA  85 41
HHJ42_RS12655 NONE
HHJ42_RS12660 NONE
HHJ42_RS12665 NONE
HHJ42_RS12670 NONE
HHJ42_RS12675 NONE
HHJ42_RS12680 2635605 .. 2635628 + -16.8  -4.33928   GGGCATGAAAGAAAA          CCCCGGTATC TGCT GATACCGGGG           TTTCTCTTTAGCATG 100 238
HHJ42_RS12690 2640117 .. 2640136 + -12.1  -5.26316   CACAGTGTTATGACA            GCCCGCC GGTTCA GGCGGGC             TTTTTTGTGGAGTGG 100 53
HHJ42_RS12695 NONE
HHJ42_RS12700 2642475 .. 2642489 +  -7.8  -4.11216   GTTACACCAGAGCGC               CCGCTC AGG GAGTGG               TTTTAAGGATAGCAG  74 5
HHJ42_RS12705 NONE
HHJ42_RS12710 2642951 .. 2642983 + -17.2  -3.16564   ATCATTGGGATTATG     CCGCAGCACG-TCTT AAGC AAGAACGTGCTGCGG      TTGGATGCTATTTTT 100 40
HHJ42_RS12720 2644016 .. 2644049 + -11.7  -3.11291   ATTTTGTGCTTGAAG     TGCCTCCCCGACCAT TCAG ATAGTCGGGGAGGGG      TATTGGGATTATACG  81 60
        pepT 2647680 .. 2647708 +    -9  -3.06133   GGAAGTAAGCGAAAA       G--GGATGCGGCAT GTG ATGCCGCATCCGGC       TTAAATCCAAACTTA  68 33
         icd 2656998 .. 2657022 + -12.2  -5.46657   ATGTGTTAAATATTA          TAACGGGCGT ATAAC ACGCCCGTTG          TTTTTTGTTAGCCTG 100 48
HHJ42_RS12785 NONE
HHJ42_RS12790 2659842 .. 2659874 + -15.1  -3.09671   CCATTTTATTAAATA      GATACCAAGCTCT ATGCATA AGAGCTTGGTATC      TATTGAAATTAAGCT  89 81
HHJ42_RS12820 2665282 .. 2665292 +  -6.8  -3.16492   CGGATTAACACAGCA                 CCAG TTT CTGG                 TCTTCCTGGCTGTCA  59 497
HHJ42_RS12835 NONE
HHJ42_RS12840 2670555 .. 2670576 + -12.3  -4.62471   TTAACAAAATTGAAT           G-GGGAGGGC TTA GCCCTCCCTC           TTTTTACAGGTTAGC 100 37
HHJ42_RS12850 NONE
        ybcN NONE
HHJ42_RS12860 2672674 .. 2672695 +  -2.9  -2.71712   AATGGTTGCGACTGG           CAGCAAGGA GGAA TCATGGCTG            ATTTAAGAAAAGCAG  41 3
HHJ42_RS12865 NONE
        rusA NONE
HHJ42_RS12875 NONE
        quuD 2674081 .. 2674116 + -14.2   -4.7497   CTTGAGGGCTCCACT    TATATGTTGC-GGAGGC AAA GCCTCCCGCAACATATC    TTTTTCGTAAGTCAG 100 162
        essD NONE
HHJ42_RS12895 2679631 .. 2679648 + -12.7  -5.72622   TATAACCCAAATACG             GGCGCCA GAAA TGGCGCC              TTTTTTATTTGTGGA 100 45
HHJ42_RS12900 NONE
HHJ42_RS12905 2682432 .. 2682442 +  -6.8  -4.68424   ACAGATCCTGTGTAT                 GGGA GTT TCCC                 TTTTTGCGTGCGTTG  81 452
HHJ42_RS12935 2686956 .. 2686980 + -12.2  -4.90455   ATGTGTTAAATATTA          TAACGGGCGT ATAAC ACGCCCGTTG          TTTTTATAAATATGT 100 48
HHJ42_RS12960 2690526 .. 2690542 +  -2.2  -3.12999   TGAATAATGCAACAG              CCTGAT TATTT AACAGG              TTAGCTATGAAGTCG  42 34
HHJ42_RS12965 NONE
        ariR 2691135 .. 2691147 +  -3.5  -2.91593   ATATGTAACTTTTAA                TTATA AAG TATAA                GTTTATAGAAAACTC  44 33
HHJ42_RS12975 2691715 .. 2691727 +  -4.8  -4.57837   GGGCTATAAATAATG                GGGA GATCG TCCC                TTTTTACCAACCTGT  71 252
HHJ42_RS12985 2693063 .. 2693079 +  -2.4  -3.46271   ATGATAATGCTGGCT              TATTTA TCATT TAAATA              TTGTCGCTGTTTATC  47 278
HHJ42_RS12990 2693851 .. 2693863 +  -4.1  -3.57792   ACAGTTACGAAGTTA                TTAGC CGT GCTGA                TTTAAAAATGAATGG  53 489
HHJ42_RS13030 2698558 .. 2698578 + -13.3   -2.6955   GGGCGTTAACGTTTA            TGACGGGGA GAG TCCCCGTCG            GTTGATATTTACTTA  85 99
HHJ42_RS13045 2700730 .. 2700760 +  -2.4  -4.34402   ACAAATAACCGATAT       CCGGCGGTGGCA TTATCTT TGTCGGCGCGGG       TTTTCATATCCACGA  59 33
HHJ42_RS13050 2701457 .. 2701485 +  -8.9  -3.09015   CGCGTTTTGTAATAC        TTTTTGCCGCC TGAAAGC GGCGGCAAAAC        TTGCATCGCTGTGCC  68 29
HHJ42_RS13055 2702074 .. 2702088 +  -2.8  -3.19389   GTTTTTGAAAGCGCT               CTGTCA TAA TGAGAG               TTACTCGATACCTTA  45 108
        umuD NONE
        umuC 2704519 .. 2704535 +  -3.6  -3.72139   GCGCCGAATGGATTA              GCGACC GAACA GGTCAC              GTTTTTTCGCTTTAA  53 73
        fadR 2707813 .. 2707834 + -14.5  -3.39772   ATCCGGCAAAAATGA           GTCCTCCTC AAAC GAGGAGGAC            TATTTACAGATTTCC 100 163
        dadA NONE
        dadX 2712087 .. 2712104 +  -8.4  -2.62933   GGTGTAACTTGTTAT             CGCTGG ATGCGA CCAGCG              TCGTATCCAGCGTTA  63 34
        emtA 2715599 .. 2715613 +  -5.6  -5.03145   CGATGTAAATCAGTC               GCGCAC ATT GTCCGC               TTTTTTCCGGGCTTC  80 33
HHJ42_RS13125 2716795 .. 2716824 + -12.9  -3.59979   TAAGATTTTCATAAG       GCGGATAGCGATA CAGA TGCCGCTATCCGC        TTTCACATCAGAACG 100 38
        dhaR 2730898 .. 2730925 +   -15  -2.58767   TTTAAGCGCCGTGGA        TAGCGGGAGAGT ATGT ACTTTCCCGCTA         TGAATTGCTAATTAA  89 23
        ychH 2733668 .. 2733697 + -11.5  -2.87963   AAATAATGCAGTTTG       CTGACCAGTCAGT TTGC GCTGACTGGTCAA        TCTCGTACTTATAAA  78 42
        hemA NONE
        prfA NONE
        prmC NONE
HHJ42_RS13245 NONE
HHJ42_RS13250 2742687 .. 2742703 +    -3  -2.61216   AATAAATAACATCGC              GCATAA ACATA TTGTGC              TGCATTAATTAATCG  40 1
        kdsA 2743623 .. 2743645 +  -9.2  -5.64274   TGTTTGAAAAATAAA           GTCTTAGCGT TCT GCGTTAAGAC           TTTTTTTATGGGTGC 100 47
        chaB NONE
        chaC 2747161 .. 2747178 +  -4.1  -4.66264   ACTGCTTCTGCAGCG             TCTGACC AATC GGTCACA              TTTTTAAGGATTTTC  69 483
        ychO 2748752 .. 2748766 +  -2.8  -4.40894   CATTTTCTTCAGCAT               GTGC TTGACGT GCAC               TTTTACTGTGCTTTC  62 98
        narK 2752873 .. 2752891 + -12.4  -5.64274   ATTTGATTATCCTTT             GCGCGGCA TGA TGTCGCGC             TTTTTTTATGCGTCA 100 49
        narH NONE
        narJ NONE
        narI 2760012 .. 2760032 + -11.9  -3.11222   TGGTGAGGTGATTAA            GAATGGTGC TTA GCACCGTTC            GTTTTAAAATTAGCG  81 131
        rssA 2764299 .. 2764314 +  -7.6   -2.7264   GGACGAACTTTTGCC              GTTGGT ACGC ACCAAC               ATTTGACCAGAATTT  58 4
        rssB 2765542 .. 2765562 +    -4  -2.79796   CCTCCTTTTCAGAAC           TTAGC-CCC TTCG GGGTGCTGA            TATACTGGGATGCGA  45 142
        galU 2766562 .. 2766583 + -12.3  -5.66684   GTGTTTTCCACGAAA           CGGCGTTGA GCAA TCGACGCCG            TTTTTTTATAGCTTA 100 52
         tdk 2768589 .. 2768614 + -16.3  -3.90762   CCCAGAAGGGGTAAT         GCCAGTCAGTT AAGC AACTGACTGGC          TCTTTTTCGGGGCTG 100 301
        ychE 2773587 .. 2773604 +  -8.4  -3.98113   TCCTTTCAAATGAAA             CGGAGC TGCCAT GCTCCG              TTTACTTCGTCATTA  76 42
        oppA 2775947 .. 2775975 + -15.3  -3.16187   AGCACTAATGGCAAT        ACGTGGGGCAGGA GTG TCCTGCTCCACGG        TGTCTGATTTTTATC 100 33
        oppB NONE
        oppC NONE
        oppD NONE
        oppF 2779904 .. 2779923 + -13.6  -3.65046   CTTTAAAAGCAATAA            GGGCTGAC AGTT GTCAGCCC             TTATTCACGTCAAAA 100 35
HHJ42_RS13435 2782085 .. 2782123 +  -9.7  -2.50438   GCGATCTACAATATC   TAAATGTACTGGGCACC ATTGC GGTGCCCAATAAGTTTA   CTCTTCCGTCTTTAA  68 23
        tonB 2784940 .. 2784967 + -17.2  -3.71848   TCAGTAAGCATAAAG        TCAAAAGCCTCC GATC GGAGGCTTTTGA         TTATTACTCAACGGG 100 34
        ompW 2787820 .. 2787838 + -11.8   -5.1848   AACCCCTCTGCAAAA             CTGGTCAT CAA ATGACCAG             TTTTTTCCATTCCTT 100 64
HHJ42_RS13505 2793055 .. 2793073 +  -6.7  -4.27062   CAAAGTAATTTTCAA             GGGGTTC TATTC GAATCCC             TTTCGTTTTCATTAA  72 53
HHJ42_RS13530 NONE
HHJ42_RS13535 2795403 .. 2795421 +  -4.5  -2.94924   GACTCGCAATATTCA             TACCGGA TCACT TCCGGCA             ATTTGTGAGTAAAAA  48 39
HHJ42_RS13540 NONE
HHJ42_RS13545 NONE
HHJ42_RS13550 2797761 .. 2797771 +  -4.6  -2.57344   TATCGGAAAAGTGAT                 TGCC GGA GGCG                 CTTATGGCAAAAGTA  46 27
HHJ42_RS13555 NONE
HHJ42_RS13560 NONE
HHJ42_RS13565 NONE
HHJ42_RS13570 NONE
HHJ42_RS13575 NONE
HHJ42_RS13580 NONE
HHJ42_RS13585 NONE
HHJ42_RS13590 NONE
HHJ42_RS13595 NONE
HHJ42_RS13600 NONE
HHJ42_RS13605 NONE
HHJ42_RS13610 NONE
HHJ42_RS13615 2801793 .. 2801806 +  -9.5  -4.76892   CGCACCCGCACTTAA               CCCGC TTCG GCGGG                TTTTTGCATTAGTCT  91 96
HHJ42_RS13620 NONE
HHJ42_RS13625 2803628 .. 2803641 +  -9.5  -6.01725   GATTGTTTGAGTATA               CCCGC TTCG GCGGG                TTTTTTGTTTTTATT 100 31
HHJ42_RS13630 2803994 .. 2804020 +    -8   -2.9587   CAACTGGCAACCTGC         AGCGCCATTG GAGATGA CAATGGCGCA         TAATTTCAAATTTCG  61 66
HHJ42_RS13635 NONE
HHJ42_RS13640 NONE
HHJ42_RS13645 NONE
HHJ42_RS13650 2806621 .. 2806636 + -11.8  -5.28176   GAAGATTTTTTACAC              CCCGCC GCCT GGCGGG               TTTTTTATGACTGAA 100 108
HHJ42_RS13655 2806949 .. 2806966 +  -9.9  -5.73978   TTGGTTGTTACAGAC             GCCTTCA GTCC TGAAGGC              TTTTTTATTTGTGGT 100 12
HHJ42_RS13660 2808206 .. 2808216 +  -2.4  -3.67296   TACCGTTATTATCCT                 GCGC CCG GCCC                 TTTAGCTCAGTGGTG  49 60
HHJ42_RS13665 NONE
HHJ42_RS13670 NONE
HHJ42_RS13675 2808479 .. 2808496 + -10.5  -5.36441   AGACTTATTTTTCCC             GGCTCGC TTTT GCGGGCC              TTTTTTGTATCCGCG 100 40
HHJ42_RS13680 NONE
HHJ42_RS13685 2809472 .. 2809489 + -12.7  -4.52857   TAGTGCCACTCTCCA             GCCCCTC TCCG GAGGGGC              TTTTCTGTGCCGGAT 100 267
HHJ42_RS13695 NONE
HHJ42_RS13700 2812771 .. 2812794 +   -11  -4.37544   TAAGCCTGCGCAAGG          GACCATCGGT GTGT GCCGGTGGTC           TTTATATTGTTGTGA  90 38
HHJ42_RS13705 NONE
HHJ42_RS13710 NONE
HHJ42_RS13715 2814097 .. 2814121 +   -10  -4.82128   GAATAAAAGTAAAAA          CCCCGTTTGT TGGCT GCAAGCGGGG          TTTTGTGTTTCCTGA  91 120
HHJ42_RS13720 NONE
HHJ42_RS13725 NONE
HHJ42_RS13730 2815240 .. 2815273 +  -8.1  -3.40899   TTATTTGTCATGCTG     GTCGGGCG-CAGATGC GTT GCATCTGTTGCCAGCC     TTCTCCTGCAGGCTT  62 249
HHJ42_RS13740 2816015 .. 2816037 +  -2.1  -3.55444   GGCTTTTTCAGCAAA           TGTTAAC CAGGCAGCA GTTAACA           TTTGCGGCATGAGAC  47 218
HHJ42_RS13745 NONE
HHJ42_RS13750 2818363 .. 2818374 +  -7.2  -6.34616   TGTAACCATCATGAA                CCGC TGCG GCGG                 TTTTTTTTATTTTCA 100 53
HHJ42_RS13755 NONE
HHJ42_RS13760 2821086 .. 2821096 +  -3.2  -5.52986   GAAGTGATCCACGAC                 CGGT TTA ACTG                 TTTTTTTCATCCGCT  86 508
HHJ42_RS13770 2823436 .. 2823447 +  -2.2  -2.52623   CTGATTTACGATTTG                CGTT GTCC GACG                 GTGTTATGAGGAGGG  39 5
HHJ42_RS13775 NONE
HHJ42_RS13780 NONE
HHJ42_RS13785 2824592 .. 2824604 +  -7.7  -5.89659   ACCCTCGAGTTTCAG                GTCAC GGT GTGAC                TTTTTCTTTTTTTCT 100 14
HHJ42_RS13790 NONE
HHJ42_RS13795 2825805 .. 2825826 +  -7.9  -2.57931   GCTTTCTGATGCGAC           TTGCGCTCC GTCT GGGGCGCAC            CTTATCCGAACTGCG  59 56
HHJ42_RS13800 2826090 .. 2826101 +  -7.2  -5.40072   CATGAATGATGAGAA                CCGC TGAG GCGG                 TTTTTTTACGCCCGG  95 36
HHJ42_RS13805 NONE
HHJ42_RS13810 NONE
HHJ42_RS13815 2830880 .. 2830892 +  -4.7  -4.09685   TTACCTGGACAATAT                GGCGG TCA CCGGC                TTTTACCGGGTGCCC  61 504
HHJ42_RS13825 2831945 .. 2831968 + -16.8  -4.33928   GGGCATGAAAGAAAA          CCCCGGTATC TGCT GATACCGGGG           TTTCTCTTTAGCATG 100 239
HHJ42_RS13830 2835787 .. 2835804 + -12.7   -5.4505   TATAACCCCAATACG             GGCGCCA GAAA TGGCGCC              TTTTTTATTGCAGAA 100 45
HHJ42_RS13835 2836541 .. 2836564 + -10.2  -5.84381   TTACACTGTCCTGAA          GCCCGTGGCG TCAC TGCTGCGGGC           TTTTTTTATTGGTGG 100 132
HHJ42_RS13845 NONE
HHJ42_RS13850 2838905 .. 2838919 +  -7.8  -4.11216   GTTACACCAGAGCGC               CCGCTC AGG GAGTGG               TTTTAAGGATAGCAG  74 5
HHJ42_RS13855 2839583 .. 2839603 +  -7.6  -3.34715   TGTCATCGTTACGGG            GATGGTGC CGCCA GCATCATC            TGTTTCAACCCAGTA  62 377
HHJ42_RS13865 2840347 .. 2840391 +    -8   -3.1478   TAAATAGTGCAAAGT CAGACCCGGCTTTG-TATTTA TTAA TGAATAACATTGTCGGGTCTG TATTAATAAAATAAT  64 53
        yciV NONE
HHJ42_RS13910 NONE
HHJ42_RS13915 2851299 .. 2851323 +  -8.7  -3.61398   AGACTTTACTATCAG          TGAGTCAGA TGTAAGT TCTGACTCA          TTGTTGCACAAAAGC  72 158
        rluB 2852263 .. 2852283 +  -8.3  -4.62872   CGGTTAATCAAAGTA            TGCCGGA CGTCATA TCCGGCA            TTTTTACAGATTAGT  89 34
        sohB 2854917 .. 2854936 + -10.7  -4.58773   GATGTAAAAGACAAA            CGCGAGG ATAAGA CCTCGCG             TTTTGCTTTAATCAA  93 34
        topA 2858204 .. 2858221 + -10.5  -5.49234   GTTTTTATAAACAAA             GGGTCGC GAAA GCGGCCC              TTTTTTATTGCATAT 100 57
HHJ42_RS13955 NONE
HHJ42_RS13960 NONE
HHJ42_RS13965 2860216 .. 2860228 +  -4.1  -4.14615   TGACCCCGCTGTTTG                CTTTG CCT CAAGG                TTTCTCCTCTTTTAT  59 45
        acnA 2863028 .. 2863062 + -11.6  -3.34344   TTGAAGTAACGAGTA     TTTGCTTGCCGG TTATTTTGCTT CCGGCAAGCAAA     TTAATTACACAATGC  83 32
        pgpB 2864664 .. 2864689 +  -4.1  -2.90813   CAATGCGCGTGGATG         CCATTT-CGC AGACGGC GCGAAAATGG         TACTTTAAAGGGCTA  46 80
        lapA 2865057 .. 2865071 +  -2.1  -2.81738   GCACTCGTCTGCGTC               GAAGG AATAA CTTTC               TATGCTGGAGTTGTT  40 16
        lapB 2866225 .. 2866237 +  -2.6  -3.18031   ATTAAACCGATTCGC                GGTC TTGAT GGCC                TGTAATTTTTAAAAA  45 8
        pyrF NONE
        yciH 2867506 .. 2867525 + -13.6  -3.71687   CGGCTAACATAAAAA            GCCACGGA TATA TCCGTGGC             TTTCGAATATTTTAC 100 34
HHJ42_RS14045 2876615 .. 2876632 + -11.3   -4.0825   GAATTAACCAATAGC             GGGGGAT ATTA ATCCCCC              TTATTTCATTGCGAA  91 46
HHJ42_RS14050 2877846 .. 2877870 +  -3.6  -3.68674   CAAGGCTGTTGAAGT         TCAGGCTAATG GAGG CAAT-GCCTGA          TGTTTTCGCGCTTTT  51 1
HHJ42_RS14055 NONE
HHJ42_RS14060 NONE
HHJ42_RS14065 2883624 .. 2883636 +  -6.2  -3.80114   CTTCGCCAAAATGAC                CGGC GATCA GCCG                TTTGGTGAGTTCATG  63 123
        pspA NONE
        pspB 2891923 .. 2891939 +  -2.1   -2.5655   CATCCGAACTGGAGG              GATCGCT AAT GGCGGGC              ATTAATCTCAATAAA  39 17
        pspC 2892275 .. 2892295 +  -3.4  -2.62463   CACGCTGCGTAGCCG           TTTCCGTCA ACTG TGA-GGAAA            GTTATGAATACTCGC  42 10
        pspD NONE
        pspE 2892926 .. 2892941 + -11.8  -5.36441   AGAATTCACCATGAG              CGGCGC TTAT GCGCCG               TTTTTTCTGTCACAC 100 42
        ycjM NONE
HHJ42_RS14135 NONE
HHJ42_RS14140 NONE
HHJ42_RS14145 2897846 .. 2897858 +  -2.7  -3.10597   GCTAAAGCGGCCAGT                TTCTT TAT AAGGA                GTTTTACATGAAAAA  43 36
HHJ42_RS14150 NONE
HHJ42_RS14155 NONE
HHJ42_RS14160 NONE
        ycjT NONE
        pgmB NONE
HHJ42_RS14175 NONE
        ompG 2905926 .. 2905940 + -11.4  -3.25823   TCGGAACATCGATGC               CGCCTG GTG CAGGCG               TTAATATAAACGACA  77 195
HHJ42_RS14190 NONE
HHJ42_RS14195 2909423 .. 2909442 +    -5  -3.34517   CGAAAAATAATGCAA            TATCGGGT GCTG ACCGGATA             TCTTTACGCCGAAGT  54 31
        tyrR 2911103 .. 2911155 + -16.5  -3.64703   GAAGAAGAACGAAGA GTAAGCGTGAATATGCCTGATGGTG CAA CACCATCAGGCATATTAACTTATGC TTTCAGTACAGCCAG 100 22
        ycjG 2913015 .. 2913049 +  -8.4  -2.94365   AATGCGGTGTATAAG     CTGGCACAGCGCCTGG GTT TCAGGTTCGGAGCCAG     GTTTGTCACCTGTCA  61 300
        pgrR 2916540 .. 2916559 +    -5  -3.66787   TTTGAATGTGCGAAG            C-CCGAACG TAG TGTTCGGAG            TTCTATGTGCTTTAC  57 165
        mppA 2918362 .. 2918389 + -14.2  -2.74525   TTAATGTGATGGGAA        CTGGCGTTACCC TTGT GGATAACGCCAG         TGATGTCTGATTTAG  87 37
HHJ42_RS14250 2919944 .. 2919961 + -12.7  -3.47751   AGTAAGTAAAAAATA             GGCCCGA TAAC TCGGGCC              TTGTCAGTTATTGAA  93 36
HHJ42_RS14280 NONE
HHJ42_RS14285 NONE
        smrA 2927066 .. 2927116 +  -2.6  -4.67353   AAGCGCAGTCGTTGA TCACGAGACGCATCCGCG-GCT TATGCCGCC AGCACGCGGTTGCGTC-CATCA TTTTTCGCTCGATAC  65 26
        zntB 2929746 .. 2929765 +   -10  -5.85178   ATTGATTCGTACGAC            GCCGACTT TGAT GAGTCGGC             TTTTTTTTGCCTGTT 100 215
        dbpA 2931465 .. 2931479 +  -7.1  -3.30243   GGGATTGCCGGATGT               GACGC TGGCC GCGTC               TTCTCCGGCCTCCAT  63 83
HHJ42_RS14345 2940918 .. 2940928 +  -6.8  -3.29727   CACTTGCCGCCGGGA                 GCTG TGG CAGC                 TATTAATTCATTAAA  61 9
HHJ42_RS14360 NONE
HHJ42_RS14365 NONE
HHJ42_RS14370 2945942 .. 2945953 +  -2.2   -5.8187   TATTTATTCGAGTAT                TGGT TTAT ACCG                 TTTTTTTATTAAATA  91 151
HHJ42_RS14375 2953296 .. 2953319 + -11.8   -5.7946   CATGTAATACATAAA          CCGCAACGCTG ATA CAG-GTTGCGG          TTTTTTTATTGCCGG 100 48
        pdxI 2954351 .. 2954378 + -11.5   -5.0917   AGAATAACGAATATA        CAAAAGGGAAA GATGCA TTTCCCTTTTG         TTTCTTTTTTAATGG 100 34
HHJ42_RS14385 NONE
HHJ42_RS14390 2956603 .. 2956625 +  -5.4   -3.3452   TTAAATTGTATGTGC           CGCTGGCACG TCC TGGGCTGGCG           TTATGGCATCGTCTG  56 486
HHJ42_RS14400 2959228 .. 2959265 +  -6.3  -2.65538   AAACAGGTAAGCGGA   TTGAGATGTGGACTGAA TATC TACAGTCCACATCAAGA    TCGTGTCCGGTTATT  53 31
        hrpA 2963975 .. 2963992 +  -6.3  -3.68827   GGCGATGGAGCAGAT             TAGCGGT TAAC ACTGCTA              TTTGCCTGATAAATC  62 16
HHJ42_RS14415 2965062 .. 2965096 + -11.5  -2.62718   CGTTACGTTAAAAAT     TGCCCGTTCGTGAAC CAATT GTTTGCAAACGGGCA     TGACTTCTGACTTTT  77 30
        aldA 2966829 .. 2966841 +  -6.9  -3.00017   TTCACCAGTTGTAAA                TCGCC CAC GGCGG                TAATTTCCGTTTGCG  56 161
        cybB NONE
HHJ42_RS14435 2969158 .. 2969189 + -11.6  -3.52009   CTTGGTTCATTCGTT      GGCCTCGGTTGATA GAAA TATCGGTCGGGGCC       TTCGTCTTTCTGATT  85 310
HHJ42_RS14455 2973747 .. 2973759 +  -2.7  -3.74762   TGCATATTCTCTGAT                TTCAA CAA TTGGA                TTATTAATAAATATT  52 128
        opgD 2975537 .. 2975560 +   -11  -2.90075   TAATCGTTTTTTCTT          CGGCATCTTC TTCG GGAGGTGCCG           TCTGGTTAAACACGA  75 38
HHJ42_RS14465 2975899 .. 2975915 + -10.8  -5.02074   TGTAAACTTTCCTAA              GCCGCC AGCCA GGCGGC              TTTTTTAACAGCTGC 100 36
        rimL 2976901 .. 2976913 +  -3.3  -3.05596   TGGCAAAATCAAAAA                CTTCG GCG CGATG                TTCAATAAAAGCATA  43 436
        tehA NONE
        tehB 2979372 .. 2979382 +  -2.6  -4.08064   CGTCTGAAAAGGGGC                 TAAA AAA TTTA                 TTTTCACCAACACTT  56 229
HHJ42_RS14490 2980148 .. 2980167 + -13.6  -5.21236   AAAGTAGTTCCAGAC            GCGCCATC GTTA GATGGCGC             TTTTTATTATCGGTT 100 34
        sutR 2982003 .. 2982023 +  -6.1  -4.63527   TTCGCAACGTCGCGC            TTGTGGCTA AAA TAGCCGCCA            TTTTTCAGCTACTGG  78 54
        rlhA 2984452 .. 2984467 +  -5.4  -3.88442   GATTTTGCATTGCAT              TCTGCCG TTG CGGC-GA              TTTAGTGCTATTTTC  63 469
HHJ42_RS14520 2986224 .. 2986234 +  -3.2  -3.08036   ACTTATTCAAGAACG                 GCTG TAA TAGC                 GTTTAATTTAATTCC  45 19
HHJ42_RS14525 NONE
HHJ42_RS14530 NONE
HHJ42_RS14535 2989572 .. 2989602 +  -2.6   -3.4331   GTTCGTGAAACGTCT      GG-GAGCGTTC-GA TGCAC TCTGAACGCGCACC      GTTTTTCCTCAAACT  48 4
HHJ42_RS14540 NONE
        patD 2991870 .. 2991881 +  -4.4  -4.04206   TGATCTTGCGTACTG                TCAG AGCA CTGA                 TTTCTCTGACAGTAC  61 72
        ortT NONE
HHJ42_RS14560 2993069 .. 2993087 +  -3.1  -2.53822   GGTAGAGGAGGTCTG             GGTGATG CGCAC CATCAGC             GTGTTCTGGACTACC  40 392
HHJ42_RS14585 2997635 .. 2997657 + -14.9  -4.19953   GTCAGTAGTCTGAAT           TTGCCCGGC ACGTA GCCGGGCAA           TTTTGCAATTAACTC 100 107
HHJ42_RS14595 NONE
HHJ42_RS14600 3000489 .. 3000529 +  -2.6  -4.58663   GTACGTATCAGAATA  TCCGGTGAAGTGATTAAT ATTTC GTTGAATATTTCTCCGGA  TTTTTGAAACCTGCT  63 482
HHJ42_RS14605 NONE
        tssI NONE
HHJ42_RS14615 NONE
HHJ42_RS14620 NONE
HHJ42_RS14625 3005753 .. 3005775 +  -4.8  -3.41051   GGTAACCTGCTCCAT           CCAGAATAAC GTG GATTTTCTGG           TTATAATCAGGATAA  54 379
HHJ42_RS14640 NONE
        tssI NONE
HHJ42_RS14650 3011278 .. 3011304 +  -2.3  -4.25283   TTATATTTTTCTATT        CC-TTTCAATCG ACTG CGGATGAAATGG         TTTTAATAAAAAAAT  57 109
HHJ42_RS14665 3012692 .. 3012704 +  -2.6  -3.21934   GCCATATCGATTTTA                GTGC CGCCC GCGC                ATTTTATACAAAACA  45 164
        nhoA 3014472 .. 3014503 + -12.2  -2.57092   TAATTTATGTCAGGT      TGCCGGATGTGGCG TAAA CGCCTTATCCGGCC       TACATTAGTCCGGTT  79 38
        fdnH NONE
        fdnI 3029668 .. 3029687 +  -7.1  -5.88565   GCTTTAAGCTGAAAA            TGGCGCT GTAAAA GGCGCCA             TTTTTTTATTGTAGA 100 51
        osmC 3035243 .. 3035272 +  -2.3  -4.54477   GTAAGGCAAAGATGC       GTTTT-TCGGTC AGACAAC GATCGACAAAAC       TTTTATCAATTTTGA  63 421
HHJ42_RS14795 3044306 .. 3044326 +  -3.3  -3.79251   ACCTTCGCAAAAATA            GGAAACAGT CTC ATTGTTTAC            TTTAGTAATACGATG  53 123
HHJ42_RS14895 3067238 .. 3067250 +  -2.7  -3.15861   AGGGTTACCAATGAG                CTATT TTT GATAG                TTCATACGGCTAATA  45 27
        ydeA 3068772 .. 3068785 +  -9.5   -5.1861   ACGCAATAGTTGAAA               GGCCC ATTC GGGCC                TTTTTTAATGATACG 100 32
        marR NONE
        marA NONE
        marB 3070760 .. 3070787 + -18.6  -3.71265   ACGCTATGTAGTTAT        TGTCAGGCTCTG ATCA CAGAGCCTGACA         TTTCCGTAATATCTT 100 30
HHJ42_RS14955 3076993 .. 3077031 + -11.9  -2.77962   TTCCCGCGATAAAAG  CAGACGCACAGAGTGCTG GCAT CA-CATTCTGTGCGTATG   GTTTAGCCTCTGACC  79 29
        ydeE 3079181 .. 3079197 +  -5.7  -4.40298   AATTCGTGCAAGACC              GTGGGGG CAG CCCGCGC              TTTGTTGATTTAAGT  70 1
        mgtS 3079453 .. 3079487 + -13.7  -3.49419   TAATCCCTCACCTAA    CCGGCCCCTTGTTACA GTTG TGTA-CAAGGGGCCTG     ATTTTTATGACGGCG 100 51
        ydfG 3084691 .. 3084708 + -10.5   -3.8591   TCAGTAATTTTTATA             CCCGGCG TAAC TGCCGGG              TTATTGCTTGTCACA  80 34
        ydfH 3085466 .. 3085489 + -13.2  -3.63744   AGAGTAATTCATTTC          CTCTCATCCC ATCC GGGGTGAGAG           TCTTTTCCCCCCGAC 100 34
        ydfZ 3085845 .. 3085868 + -11.8   -4.8622   ATGAACTAAGCGTGT          G-AATGCCGCC GAT GGCGGCATTGC          TTTTTACTTCACGGA 100 32
HHJ42_RS15035 NONE
        speG 3092733 .. 3092748 +  -4.6  -4.36411   TTTTGATGGTGTAAA              CCCGTT CGAC GGCGGG               TTTTACTCCTTCATC  67 63
HHJ42_RS15050 3093838 .. 3093860 + -10.6  -2.74144   ACATTATCGACTGAA           CGCCGGAT ACGACAC ATCCGGCG           ATTTGAACATACAAC  74 42
HHJ42_RS15055 NONE
HHJ42_RS15060 NONE
        dmsB NONE
HHJ42_RS15070 3100422 .. 3100439 + -12.7  -2.76315   CAGGTTAACAAATTG             GTGCGGG GCAA CCCGCAC              ATTTCAGGATGTTAG  82 33
        dmsD 3101048 .. 3101060 +  -9.1  -3.41073   CTGTTGATTCCTGTC                GCGGT TAA ACCGC                TGTTTCGATAGGATC  71 2
        clcB 3102913 .. 3102926 +  -3.1   -4.4846   ATTGATTGGGCAACT               GT-GCG CCA CGCTAC               TTTCTTCTTCGCTTA  65 416
HHJ42_RS15100 3106909 .. 3106944 + -12.7  -3.09516   GCACGCCTGAAAAAA    TAAGTCCGGACTGAGG TAAAT CCCC-GTCCGGACTTA    TTGCCTGCTCAAACC  83 31
HHJ42_RS15105 3107681 .. 3107711 + -11.9  -2.71924   TCGCGCCTGAAAAAT       ACGGTGCTAAGCG GGTAA CGTTTAGCACCGC       CTTTAGCGGAGGGTA  79 70
HHJ42_RS15110 NONE
HHJ42_RS15115 3108742 .. 3108765 + -15.3  -3.13403   AAAATAATGTTCAAA          CGCTGCCCG ACAGCG CGGGCAGCG           TGTTCATCAGGCAAG 100 34
HHJ42_RS15265 3130607 .. 3130623 + -10.8  -3.81062   CAGTTACTCCTATAA              GGCGGC TTGAT GCCGCC              TTTCGCATTTTTAGT  85 46
HHJ42_RS15270 3132147 .. 3132165 +    -6  -2.75064   CGACCTGGATGCTGG             TGGGATAA CGT TCATCCCA             TCGTTGGATAGCAAA  53 18
        folM 3132890 .. 3132905 +  -5.4  -2.56715   CGCAGTCTCCCACTT              GATGGC GGTC GTCATC               TGCGTTAATGCAGCT  50 2
        rstA NONE
        rstB 3135411 .. 3135428 +  -3.4  -2.67925   TGACACTATGCGCAC             GGTGGT CAAGTC ATCACC              ATTGTGCTATAAAAT  42 38
         tus 3136847 .. 3136862 +  -5.4  -4.11484   TTTCCCCGGCATGAT              TGAGCT GCCC GGCTCA               TTTTCCGGGATTGAG  65 469
HHJ42_RS15315 3142589 .. 3142612 + -13.9   -5.5604   AATTCACAGCCAAAA          CGCCGGAGA TTTTTC TCTCCGGCG           TTTTTTCTTACTTCA 100 39
        malX NONE
        malY 3153170 .. 3153211 +  -8.7    -4.652   CCGCGCTGTTGGTTA ACCCCAATTGCGCAACG TAAAAAAT CGTTGCGCAATCGTGGA  TTTTTACCCTGCTTT  89 25
         add 3154282 .. 3154306 +   -10  -3.04398   GCGAAGTAACAAAAA          TGGATGGTGC TAATT GCACCATCCC          CTTTTCACGCAAGGC  73 32
         blr 3155740 .. 3155762 +  -6.3   -4.3208   GCACTTGTTGAGCGA          CATGCTGCCC GTCC GGGT-GCATG           TTTTCACTTGTCGGA  73 46
        ydgT NONE
HHJ42_RS15380 NONE
        rsxA NONE
        rsxB NONE
        rsxC NONE
        rsxD NONE
        rsxG NONE
        rsxE NONE
         nth 3163279 .. 3163296 +  -8.5  -2.63301   AAATTTTCTATTCAT             TCGTGAT CAAG ATCACGA              TGCTGTGGCAATGTA  63 196
        dtpA 3165245 .. 3165267 + -13.5  -6.36459   GAAACTCTTTTACAA           GCCGCTAAC TTTTC GTTAGCGGC           TTTTTTTTTGTTCAG 100 49
        gstA 3166025 .. 3166048 +  -9.6  -3.17586   TTGGCAATACGATCC          TGAGCAGCAA CCAC TTGCAGCTCA           TATTCCTGCATTGCT  67 118
        slyB 3171298 .. 3171333 + -11.8   -3.5332   CCCCGCGCTAAATAA    GTTTGCGTGTGGTCAG GTTA CTGACCACACGCCCCC     TTCATTTCACCCTTT  88 30
HHJ42_RS15465 NONE
HHJ42_RS15470 NONE
HHJ42_RS15475 3175129 .. 3175139 +  -8.2  -3.78329   TAGCGTTCACCGCCA                 CCGC CCA GCGG                 TTTGGGTTGATCGGA  72 71
        nemR 3177571 .. 3177590 +  -4.9  -5.24129   AAAACATTATTGCGA            CGCCTGC CGTTTA GCAGGCA             TTTTTTATCACCAGA  82 12
        nemA 3178732 .. 3178749 +  -9.8  -2.78463   AATCCAACATTGCGA             GCGGCG CAAAGC CGCCGC              TATACTAAAACAACT  69 39
        gloA 3179212 .. 3179239 +  -9.9  -3.46647   GGGCAACTAATCTCC        TGCCGGGCGTGA ACTCA TCGCGCCCG-CA        TCTTTACTGCATCGA  75 31
         rnt 3179964 .. 3179995 +  -7.4  -2.79679   AGGTGTAATCGAGTC      GATGCCTGATGACAT GCA ATGAT-TCAGGCATC      TATAGTGAGGCTATT  58 33
HHJ42_RS15515 3180286 .. 3180313 + -15.7  -3.01791   GGGATAGAGAAAGGA        CTGACGGATGC CCGTTC GCATCCGTCAG         TATTGCAGGACGGAT  93 119
        mepH 3181829 .. 3181858 + -12.3  -3.59432   ACACTTCGCTAAAAC       TTTACCCTGTTGT TACG GCAACAGGGTAAG        TTCATCTTTTGTCTC  95 29
        sodB 3182647 .. 3182668 + -14.5  -5.38326   TGCCAGCAACTGTAA           CGCAGAAGG TTAT CCTTCTGCG            TTTTTGTTTAATTAG 100 138
        purR 3185432 .. 3185446 +    -7  -3.07895   ACTATCGTCGTTAAT               CACCCG TTG CGGGAG               TCTCTTCCGGCTCCC  58 27
HHJ42_RS15555 3187883 .. 3187902 +  -7.1  -2.91276   ACGTCGGATTATAGA            CTCGCGG TTTTTT CTGCGAG             ATTTCTCACAAAGCC  59 225
         cfa 3189134 .. 3189154 +   -14  -3.60475   CTAAAGGCTATTCTA            TCGCCCCC TCTCC GGGGGCGA            TTTCAGATCAGGCTT 100 37
        mdtK 3191398 .. 3191428 + -12.7  -4.57073   GCTCGCTAGTAAAGA      CA-AGGCGCAACCT TCAC GGGTTGCGCCTGTG       TTTTTACGCAGGCTG 100 32
HHJ42_RS15580 NONE
HHJ42_RS15585 3193152 .. 3193170 +  -7.5  -3.47447   GTCCACTCGGACGCA             CCAGATT TTCTT AATCTGG             TCTTCTCCTTTTTTC  65 23
HHJ42_RS15590 3193546 .. 3193572 +    -8  -4.25104   TGCCACTGAGTCAAA         TCAATCAGGCAA AAC TTGCCTGACAGA         TTTTAATCAAGGGCG  76 3
HHJ42_RS15595 3195549 .. 3195562 +  -8.1  -2.72144   CAATTCTGGCGTTTG               CGCCA AAGC TGGCG                ATTTGCACCAGGTCA  57 276
        pykF 3203707 .. 3203722 + -11.8  -5.99154   AATTTGTATATCGAA              GCGCCC TGAT GGGCGC               TTTTTTTATTTAATC 100 58
         lpp 3204243 .. 3204261 + -14.6  -5.82316   CTGTGAAGTGAAAAA             TGGCGCAC ATT GTGCGCCA             TTTTTTTTGCCTGCT 100 47
        ydiK 3216584 .. 3216604 + -16.9  -3.62775   ATAAGTAATTTCTCA            TCAGGCGGC TCT GCCGCCTGA            TTGTTAACCCCTGCT 100 33
        rprA 3216947 .. 3216958 +  -4.4  -2.93099   ACTCTCTTCAAGCCG                TCAG CAGG CTGA                 TAATGTTATTTATAT  48 103
HHJ42_RS15705 NONE
HHJ42_RS15710 NONE
HHJ42_RS15715 NONE
        ydiB NONE
        aroD NONE
HHJ42_RS15730 NONE
HHJ42_RS15735 3224746 .. 3224783 + -11.2  -3.85698   CAGAACAAATAATCT   GCAGGCGGCGCAGCTT CTTAAC AAACTGCGCCGCCAGA    TTTATCCGGCAAGAC  91 29
HHJ42_RS15745 NONE
HHJ42_RS15750 NONE
HHJ42_RS15755 NONE
HHJ42_RS15760 3229379 .. 3229404 + -11.2  -3.81755   GCTAATCATGCATCC         CA-CAGGCCCG CATCT CGGGCCTGATG         TTCTGTTTCGAGAGT  91 36
        fadK 3231095 .. 3231121 +  -9.3  -5.02645   TTCGGGGATCACATA         AACCCGGCGAC AAAAC GCCGCCGGGTA         TTTATTTTATTTCTT  93 49
        ppsR 3234665 .. 3234684 +  -7.2  -3.44602   GCCTTAGCCGCCGAA            TGTACTAG AGAA CTAGTGCA             TTAACTTGTTTTTTT  65 18
        aroH 3235881 .. 3235904 + -13.2  -3.86822   TCGCTTCTGAATGCG          TGCCCATTCC TGAC GGGATGGGCA           TTTCTGCGCAACTTG 100 31
        hemP 3236575 .. 3236610 +  -5.4  -3.64164   TAATCGCTGCGCTCT    CGCGCCATCAGACTGAA TAA TTCATTCAG-TAGCGCG    TTATCCTCTTTTTGC  58 402
HHJ42_RS15865 3251084 .. 3251096 +  -9.1  -3.67141   GCCCCGGAGGCATAG                CCCAG CGG CTGGG                TTTCACTGGCATTGT  73 316
        pfkB NONE
        ghoS NONE
HHJ42_RS15885 3254195 .. 3254211 + -10.8  -4.43477   TGGGTTGAGGATAAT              GGCCGC TCCGT GCGGCC              TTTTGATTAAATAAA  90 43
        hxpB 3255573 .. 3255601 + -15.4  -4.16301   CTTCTCGGTTAATGA       CCAGGGGGCAGTG ATCA CACTGCCCC-TGG        TTCTTTATCTGAATT 100 29
HHJ42_RS15900 3256344 .. 3256360 +  -5.2  -3.70902   CAAAAATCGCCTTTC              TGGAAT AAGCA ATTCCA              TTTGAATATAAGAGC  57 46
        tcyP 3257868 .. 3257888 +    -9  -5.95946   ATTTGTTACGTTAAA            CGCCTGTC ATCCC GACAGGTG            TTTTTTTATTCTTCG 100 46
        katE 3260604 .. 3260642 + -11.1  -2.60723   AATCCCGGCGTAAAT  ATGGATAAGGTCACGCCC CCTC GGGAGTGACCTTA-CCAC   CTTACTTACACATCA  74 28
        nadE 3267593 .. 3267620 +   -12  -2.77895   GCGAAAAAGAGTACT        TTGTTCACGCCG GATG CGGCGTGAACGC         CTTATTCGACCTACA  79 63
         cho 3269115 .. 3269160 +  -2.5  -3.53761   CCAGTAAAAATCACG TTTTGCCGGTGGGAAAGTGCAA ATT TCGCGCGTTTC-ACCGGCAGCG TTTCGCCACAGATTC  47 468
        xthA 3277500 .. 3277510 +  -5.4  -2.66964   GGGCGACCTTCCGCC                 GCTA ATT TAGC                 TGATCTCCTGGCTCA  50 21
HHJ42_RS16005 NONE
        ydjY NONE
HHJ42_RS16015 NONE
HHJ42_RS16020 NONE
HHJ42_RS16025 NONE
HHJ42_RS16030 NONE
HHJ42_RS16035 3283661 .. 3283674 +  -2.3  -2.61004   GAAAATTACAACAAA               CTGCG ATAA CGCAA                AGTTTTTCCCGATGC  39 17
        ynjE 3285336 .. 3285349 +  -5.9  -4.26903   CAAACAGCAGCCAGC               CGCCT ACCA GGGCG                TTTTGCTCCGGTGCG  70 318
        nudG 3286289 .. 3286314 +  -7.5  -2.66272   GGCTGCGCTGACTGC         CCGCCTGAACT GAAC ACTTCTGGCGG          TACGTTTACCTCCAC  56 148
        gdhA 3287996 .. 3288023 + -11.4  -4.21275   TAATCGTTATTACAA        TCGTCTGGTTTT CCTT ATAACCAGACGA         TTTTCCCTGAGTTAA  93 38
        sppA 3297736 .. 3297760 + -11.4  -3.83042   TTAAGTCTTGTACTA          AGTGGCCGAC AGATC GTCGGCCACA          TTACTTTTTACGTCG  91 37
        ansA NONE
        pncA 3299598 .. 3299627 +  -3.5  -2.71364   TACTGGCATTGTAGG       CCAGATAAAACAC ATCA GTGATACATCTGG        TAATTGACGCCATCA  43 64
        gapA 3310825 .. 3310842 + -11.3  -5.82316   TCTGTGATCTAAAAA             GAGCGAC TTCG GTCGCTC              TTTTTTTTACCTGAT 100 52
HHJ42_RS16160 3311932 .. 3311945 +  -3.7  -4.13945   TTTTGTTGGACATGT               GCGAC AGTT GCCGC                TTTTGGGATCGCCAT  60 191
        yeaG 3315853 .. 3315868 +    -4  -2.73875   ACTGTGCGAATGGTA              TTTGCG CGTA CGTAAA               TCGTCTTAACAACCC  45 1
HHJ42_RS16180 3317279 .. 3317305 +  -9.4  -4.82901   TAAAGACTAAAACTG         TCAGCCGGGTCA TTA TCGCCTGGCTGA         TTTTTGTGCACAGAA  91 31
        tnpA 3317995 .. 3318013 +   -16  -2.81702   GGCGCATTTGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTAGCTCA 100 107
HHJ42_RS16195 NONE
        yeaK 3321989 .. 3322002 +  -3.1  -3.44801   CACAAATGGCAGTTT               GATGA CAGT TCGTC                TGATTTTTTATGCAA  50 191
HHJ42_RS16210 3322563 .. 3322584 + -11.5   -4.1711   ATCCCGCAATATATC           GGCCTGGCG TTTG CCCCAGGCC            TTTCTTAAACATAGT  93 44
        nimT NONE
HHJ42_RS16225 3325164 .. 3325197 +  -3.8  -3.72984   TCTGCTGGCAATAGA     CCGACGCCGGATTTG CCATA CCAATCT-GCGGCGG     TTTAGGTGCTTCTGG  56 187
        dgcP 3326473 .. 3326490 +  -3.3  -3.09131   TTGTCACGCATTCAG             CGCTACA TTCC TGAGGCG              TATTCACATCCTTTT  45 12
        yoaK NONE
        yoaJ 3326718 .. 3326735 +  -8.4  -3.95219   CTAAAAAATAGCAAA             GGCTGC CTGTGT GCAGCC              TTTGTGCAATTTACG  76 49
HHJ42_RS16300 3335932 .. 3335948 +  -2.9  -4.19817   TCAGACGATAATTTA              TCGACAA TAC TGGTCGG              TTTTGCATAAATCGA  58 62
HHJ42_RS16305 3336646 .. 3336676 + -11.3  -4.84359   AGCACAAATGGGTCA       GGACGCTTTTAAT CACAT ATAAAAAGCGTCC       TTTTTCTCACAATCA 100 55
        pabB NONE
HHJ42_RS16320 3339078 .. 3339097 +  -6.4  -2.58427   CGCTGTTATTAGTTC            GTTACTGG AAGT CCAGTCAC             CTTGTCAGGAGTATT  53 171
        sdaA 3340491 .. 3340515 + -12.9  -2.92668   ACTAATACTTCTTAC          TCGCTCATCTG CAA CGGATGGGCGA          ATTTATCCCCGCTTT  86 36
HHJ42_RS16330 3342199 .. 3342211 +  -6.3    -2.567   TCACACCCATTATGC                CGTTA CGT TAACG                CTTACTCATCTTCAT  53 15
        manX NONE
        manY NONE
        manZ 3346947 .. 3346964 + -14.1  -5.71712   ACTGTTGTACACTAC             CGGGGCC TTTT GGCCCCG              TTTTTTTATCTGGAG 100 42
HHJ42_RS16355 3347454 .. 3347505 +  -9.8   -3.1577   AATAAGTTATGAATT TAGCCAAAGCTATGTTTAGTGTATT TTT AATA-ATCAGACATAGCTTAGGCTA TATTACCTCTTCCCT  72 36
        mntP 3348853 .. 3348874 +  -4.3  -4.43501   CACAAAAAGTGACCT           GCGGATAGCG TTT CGCCG-CCGC           TTTTATCGCTACCTT  67 441
HHJ42_RS16390 3351449 .. 3351479 + -11.3  -3.56704   CTCATGCTAAATAAA       GAACCTGTCTG TTTGATATT CAGACAGGTTC       TTACTTTCCTCAGAA  85 129
HHJ42_RS16400 3353836 .. 3353855 + -10.7    -4.946   CAGGGCATAAAAAAA            GCGCGTC GATCAG GACGCGC             TTTTTAGTATTTACT 100 31
        yebS NONE
        yebT 3362332 .. 3362357 + -14.7   -3.9712   CCAAATAATGCCCAC         TGCTCCGGCGT GCCT GCGCCGGAGCG          TTTATGCTAAACTGC 100 33
        rsmF NONE
HHJ42_RS16440 3364210 .. 3364226 +  -7.9  -4.12857   CTGATCCAAAAAGAA              CCCGTCG GCA TGGCGGG              TTATTTGTCCTGGTT  74 37
HHJ42_RS16445 3364744 .. 3364754 +  -2.4  -3.00298   AGCAATAACATGTTT                 GCCG GTG CGAC                 TGTGTACTTCAAGAA  42 275
        holE NONE
HHJ42_RS16475 3368285 .. 3368301 +  -2.1  -3.07233   TACGCTAGGCTTTTT              CGGCCTG GAG CATGCCA              TGTTGCGCATTATCG  42 33
        exoX 3369367 .. 3369388 +  -7.3  -3.39895   GTACCTGGGCGATAA           CGCCGTGGAA CAA TTCCG-GGCG           TTGATTAATCGCAAC  59 429
        purT 3374266 .. 3374286 + -15.5   -4.4267   AAAACGCTACAAAAA            TGCCCGATC CTC GATCGGGCA            TTTTGACTTTTACAG 100 51
        hexR 3379756 .. 3379768 +  -6.2  -4.08651   ATGAGATTAATTTAT                CGCC ATCAC GGCG                TTATTTCATTCGGAT  68 79
         pyk 3381379 .. 3381399 +  -6.8  -5.68438   TTATCATCAGTCGAA            GGCCTCTC CTCGC GAGAGGCA            TTTTTTATTTGATGG 100 132
        znuC 3385578 .. 3385617 +  -3.6  -3.33815   CGAATTGTTTTGCGT  CGGGGAAATGATCGCTCA TGAT TGAATTATTATTTCCCGG   TTGGTTAGCCGGGAT  48 5
        znuB 3386409 .. 3386420 +  -7.2  -3.30124   ATATTTGTCGGATGC                GGCG CGAG CGCC                 TTATCCGACCTACGG  63 54
HHJ42_RS16575 3389167 .. 3389196 +  -7.1  -5.02074   TAGCGGGCAGTTTCA       GCAAGGTGCGG ACCATATG CTGCACCTGGC        TTTTTTCGGCACTAC  86 161
HHJ42_RS16600 NONE
HHJ42_RS16605 3394290 .. 3394300 +  -2.4  -3.04894   CCTATCATAGACAGG                 TGCC ATC GGCC                 ATTTTAAAGGGAGTT  42 49
HHJ42_RS16610 NONE
        cmoA NONE
        cmoB 3396603 .. 3396620 + -14.1  -4.20712   GTTTGCATAACCTCA             GCGCCCG TTTC CGGGCGC              TTTTCACGTCTTATG 100 162
        argS 3403866 .. 3403889 + -12.5  -5.37345   CGTTATACGGCAACA          GCCGATGTC ATTGCA GACATCGGC           TTTTTTATCATTAAC 100 44
        uspC 3419420 .. 3419433 +  -4.5  -3.67296   GGCTTTCTGCGCTTC               GCGGA ACTA TCTGC                TTTAGGTCGCTAATG  55 88
HHJ42_RS16755 3426651 .. 3426678 + -11.3  -5.16237   GAAGTTTTTGAGAAA        CCGCTGCCTCA TTTTTT TGAAGCAGCGG         TTTTTTAATGGGATT 100 72
HHJ42_RS16770 3427732 .. 3427754 + -10.6  -3.07816   CTCTAAACGTTTTAA           TCAGCGAGGG GGA TCTTCGCTGA           TTAAATAAATAGCGG  76 35
        ftnA 3428399 .. 3428421 +   -17  -3.61178   AAAACTAATGCTCTC           CGGCGGCAGG TTT TCTGCCGCCG           TTTCAAATCAGTGAC 100 33
        tyrP 3430137 .. 3430150 +  -3.8  -3.37761   ATGTGACCTCTTAAT               GCAG GCAGCA CTGC                TTAAATTTCTTACCA  50 92
HHJ42_RS16825 NONE
HHJ42_RS16830 3435227 .. 3435253 + -14.5  -4.70659   GTCAGTAATATAAAA         CCGGCTGAGAG CGTGC CTTTCAGCCGG         TTTTTGCATCTGGCA 100 33
        fliD NONE
        fliS NONE
        fliT NONE
        amyA 3446618 .. 3446643 + -11.2  -3.90291   AGAGGTGATTTAAAT         TCATCCCCGGC GGCAA GCCGGGGA-GA         TTTCATTACGGCAGT  91 28
        yedE NONE
        yedF 3448690 .. 3448718 + -11.7  -2.78422   TCAGAAGTAATCCCT        CATTCCCGCTGTG GCC CACAGCGGGAACA        TCATTACCTCTCTAT  79 31
HHJ42_RS16910 3449684 .. 3449704 +  -3.3  -4.43351   AAATCTAAACAAATA            TCATGCAAA TAA TTTCCATGG            TTATTTTTAGGCTAT  62 248
HHJ42_RS16915 3451194 .. 3451213 + -13.6  -4.78107   TTACCCTTCCTTTTC            TGGGGCGT TTCA ACGCCCCA             TTTTTAATAATACTC 100 162
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ NONE
        fliK 3460552 .. 3460562 +  -3.2  -2.79831   GCGTGTAACAGGTAA                 CAGC GGC GTTG                 ATATTTTCGCCTAAC  43 1
        fliL NONE
        fliM NONE
        fliN 3462550 .. 3462560 +  -2.4  -3.22298   TCCGAGCGGATGCGC                 CGCC TGA GCCG                 TTAGTGATGAATAAC  44 11
        fliO 3462915 .. 3462936 +  -2.1  -3.29782   AAAAATTTGCTTAAG           CGTGGCGGG AGAT CCTGATGCG            TCGTTTGTTTTCTGT  45 8
        fliP 3463644 .. 3463656 +  -3.3  -3.06515   AATTGCTGGTCGGTT                CGCTG GCG CAGAG                CTTTTACAGCTAGAG  45 0
        fliQ NONE
        fliR 3464932 .. 3464946 +  -2.8  -3.05935   GTCCGCCTGAAAAAT               TGCG AGAGTGG CGCA               TTAGGTGACCCATGT  43 215
        rcsA 3465652 .. 3465697 +  -9.7  -2.61126   TTTTGTCAACATGCG CTAACACATTCTGACTGGTGG TTTC CCACCAGTCAGGCTGAATAAG ATTACTCTGCTTTCT  68 22
        yodD 3466467 .. 3466482 +  -6.8  -2.85351   AGAAATGTGACGCGC              GTCACC CCTT GGTGGC               TCTGGTGTCAACGGG  56 215
HHJ42_RS17025 3467742 .. 3467756 +  -3.5  -3.62096   CGCCTGATGACCAAA               GCGGT CATTA ATCGC               TTTAAAATGGTCAAG  53 379
        yedA 3472012 .. 3472035 +  -3.2  -4.07568   ACGCAACGCCACCGC          CTGTTTGA TTTTTGGC TCAAGCAG           TTTTGCCACCGCGGC  58 516
HHJ42_RS17070 3476212 .. 3476241 + -13.7  -5.80364   TAAAACATAACACCA       GCCTGAGTTCG TCCCTCAT CGAACTCAGGC        TTTTTTTATTGGCAT 100 69
        hchA 3477651 .. 3477683 + -12.8    -5.055   AAGCGCATAATCAAT      CGCAGCCACGTT AATACTCAC GACGTGGCTGCG      TTTTTTCACGGTTAA 100 61
        hiuH NONE
        msrP NONE
        msrQ 3482219 .. 3482234 +  -6.2  -3.87569   TGAGAATACCATGCT              CTCATT TCCT AATGAG               TTGTTGCATTTTTTC  66 197
        zinT 3483045 .. 3483069 +  -9.4  -5.62045   AGTAAGACAAACTCA         GACACG-CTCA TACT TGAGTCGTGTC          TTTTTTATTATGTCT 100 115
HHJ42_RS17110 3485020 .. 3485032 +  -4.9  -3.06302   GGGGTATTGTGTTTC                TTAGA AGT TCTAA                TTAGCTACAAATAGT  51 22
HHJ42_RS17115 3485713 .. 3485723 +    -4  -2.78018   ACTATGTCGTGCATT                 TTTG ATT CAAA                 TAATTAATACAAAAT  45 124
HHJ42_RS17150 NONE
HHJ42_RS17155 3494138 .. 3494179 +    -9  -3.93695   TTTCAGGGAATAAGA TAATAAACCACCACCA CAATGCGGGT TGGTAGTGGTTTATTA  TTTATAGCTGCTAGC  79 55
HHJ42_RS17170 3495762 .. 3495775 +  -5.3    -5.055   TTTATAAAGGAAACC               GCAAA TATA TTTGC                TTTTTTAAAAATTAA  79 66
HHJ42_RS17175 NONE
HHJ42_RS17180 3496894 .. 3496907 +  -6.7   -2.7386   GACTGCGCCCCAAAA               GTTGG ACAC CCAAC                TGATTAAGGTGCATT  55 61
HHJ42_RS17185 3497127 .. 3497144 +  -2.7  -3.67602   CTGTAATCATTTGAT             GTATTTC TTTC GAAGTGC              CTTTTTTAAATATAT  50 27
HHJ42_RS17230 3509183 .. 3509193 +  -5.4  -3.71924   CAGGCTGGAAAAAAA                 GAGA GAA TCTC                 TTATTGAATACTTTA  61 366
HHJ42_RS17240 3510048 .. 3510067 +  -5.7  -4.56914   CTAATCACAATAAAA            CCGTCAA TCTAAT TTGGCGG             TTTTACTTTCGCTCC  72 37
        mtfA 3515041 .. 3515052 +  -4.4  -3.29727   TGATACAGACTCGTT                TTCG GCGA CGAA                 TGTTCATTAATTAAC  52 4
HHJ42_RS17290 3515361 .. 3515372 +  -2.2  -3.38316   AAATTGGTGGTCAAA                TCTG GGGT CAGG                 TTAGTTCGATAATGG  45 148
HHJ42_RS17295 3516698 .. 3516716 + -14.6  -3.60814   TCTGGCAAATTACCA             CCACCTCC ACA GGAGGTGG             TTCTATATAGACTTT 100 61
        ybtA 3524211 .. 3524241 + -21.3  -3.93658   TAAACTCCTCCCTGA       CAGAGGCCCGGAT ACCCC ATCCGGGCCTCTG       TTCTTTCCGCCTGTT 100 58
        irp1 NONE
        ybtU NONE
        ybtT NONE
        ybtE 3543630 .. 3543642 +  -6.9  -3.02144   CATTGTCGGTATTTT                TGGCG TTT CGCCG                TCTTACAGGGACTCA  58 123
        fyuA 3545696 .. 3545716 + -11.2  -4.08945   CTGATTATTGTAAAA            GGGATACC GAAAA GGTATCCC            TTTTACACCACTAGT  91 37
HHJ42_RS17355 NONE
HHJ42_RS17360 NONE
HHJ42_RS17365 3549651 .. 3549661 +    -4  -4.88228   TATTGGCATATCTGT                 TTCA CTT TGAA                 TTTTTGCTATTAGAT  71 495
HHJ42_RS17375 3551375 .. 3551385 +  -2.6  -4.77698   TGTTATGTTCTTCGC                 TAAA TCT TTTA                 TTTCTTTTAATGTTG  68 120
         amn 3554918 .. 3554950 + -12.1  -3.34013   TAAGTAAGACATCTG      GCAAATAGCCTGC AATAAAC GCGGGCTGTTTGC      TTCCTTGGGCAGATG  85 81
HHJ42_RS17395 3555929 .. 3555963 + -13.9  -2.88212   ATCTCTAATTATATG     TTAAAGAAATCTGTC TTTAT GGCAGATTTCTTTAA     TCTCATATAATCCTT  87 33
HHJ42_RS17410 3558286 .. 3558304 + -11.7  -4.86133   CCAAATTTCTGAAAA             GCCCGCT TTTAT AGCGGGC             TTTTTGCTATATCTG 100 38
HHJ42_RS17425 3560694 .. 3560711 + -11.3  -5.05505   GCCAAATTCAAAAAA             GCCTGCT TTCG AGCAGGC              TTTTTGCTTTCTAAT 100 37
HHJ42_RS17465 NONE
HHJ42_RS17470 NONE
HHJ42_RS17475 NONE
HHJ42_RS17480 3569001 .. 3569023 +  -9.8  -4.21974   ATCCTGAAATTAAAA           GGGCAGAATC AGC GGTACTGCCC           TTTCTTCACTGATAC  84 34
        pduA NONE
        pduB 3578140 .. 3578150 +  -5.4  -3.89346   CCTACATCTGAATTC                 TCTG AGG CAGA                 TTTATGAGATCGAAA  63 30
        pduC NONE
HHJ42_RS17540 NONE
        pduE 3581235 .. 3581246 +  -5.8   -3.7732   TCGGCATCAATGTTA                GCGA TATT TCGC                 TTATTCGTATCAACG  61 231
        pduJ NONE
HHJ42_RS17565 NONE
HHJ42_RS17570 NONE
        pduM NONE
        pduN NONE
        pduO NONE
        pduP NONE
HHJ42_RS17595 NONE
HHJ42_RS17600 NONE
        pduT NONE
        pduU 3589578 .. 3589589 +  -4.4  -2.87963   ATTACGCGGACCTGA                CGTT ATGC AACG                 TATGATGCTTATCGG  48 26
        eutP 3590086 .. 3590108 + -16.4  -3.05384   AGAATCAATGAGCAA           TGAGGGTTGC CGG GCAACCCTCA           TTGAATAAAACAGGA 100 86
        sbcB 3595319 .. 3595339 + -11.9  -3.92522   GCTTTTTGAGATTTA            CCGGATGAT TAT GTCATCCGG            TTTGTAAGATTACGC  93 69
        hisL 3599756 .. 3599782 + -22.4   -5.4505   TGAACGCATGAGAAA         GCCCCCGGAAGA TCA TCTTCCGGGGGC         TTTTTTATTGCGCAG 100 66
        hisG NONE
        hisD NONE
        hisC 3603096 .. 3603108 +  -3.3  -3.76224   GTCATTGACGCCTTA                CGTGC GGA GCAAG                TTTGATGAGTCAGAA  53 8
        hisB NONE
        hisH NONE
        hisA NONE
        hisF NONE
HHJ42_RS17715 3607007 .. 3607032 + -14.7  -4.21607   ATCCGGCAAAAAAAA         CGGGCATGGTG TCAC CACCCTGCCCG          TTTCTCTTAAATGCA 100 162
HHJ42_RS17900 3648377 .. 3648397 +  -6.9  -4.45068   ATGGCGTTTCCACAT            GCGATATTT CTT AAATAACGC            TTTATTATTACCACT  77 52
HHJ42_RS17905 3650154 .. 3650168 +  -7.1  -3.30124   ATGTAGGCCTGATGC               GACGC TTTAC GCGTC               TTATCAGGCCTACAG  63 45
HHJ42_RS17925 3657053 .. 3657066 +  -8.1  -3.30124   CCCATTGCCTGATGC               GACGC TAAC GCGTC                TTATCAGGCCTACAA  65 52
        yegD 3659504 .. 3659518 +  -2.1  -4.83615   ACGGCTTAAATCTGC              CTGCGC CTGA GC-CAG               TTTTTCTGCCGCCTG  66 59
        mdtA 3664961 .. 3664971 +  -6.8  -3.01712   AAAAAGGAGCACGCT                 CCTG ATG CAGG                 TGTTACCCCCGAGCA  58 21
        mdtB NONE
        mdtC NONE
HHJ42_RS17980 NONE
        baeS NONE
        baeR 3674760 .. 3674773 +  -6.7  -2.75022   ATTATCCCACGCATG               GTCAG CAAA CTGAC                ATTATCTCTCCGCCC  55 85
HHJ42_RS17995 3675238 .. 3675248 +  -4.6  -3.60792   GGGCGTAGGTTGTTG                 GCGT CCG GCGC                 TTTACCAGTTACCCC  55 51
HHJ42_RS18000 3676854 .. 3676885 +  -8.1  -5.28176   CCAGGAACCACCTCC      TTAGCCTGTGTAA TCTCCC TTACACGGGCTTA       TTTTTTATGCATAAG  91 159
        yegS 3678728 .. 3678739 +  -5.8  -3.30124   CGTAATGCCGGATGC                GGTG TAAA CACC                 TTATCCGGCATACAG  56 73
HHJ42_RS18055 NONE
HHJ42_RS18060 NONE
HHJ42_RS18065 3689823 .. 3689867 + -15.8  -3.79993   GCTGTACTCAATAGG CCGTTGCTGTTGGTCAAGCG CCACT TGCTTGATCACCAGCACCGG TATTTTGCTATCTAA 100 62
        rcnA 3694549 .. 3694567 +  -7.4  -4.08919   CTCTCTGCTCGCTAA             GGATGCTT TTA GGGCATCC             TTTCATTTACACTTT  72 108
        rcnB 3695487 .. 3695503 +  -5.1  -3.28791   TTTATTGTTGTTTTG              TTACCTG TGG CTGGTAA              TTGTGAAACGGGAAT  54 489
        metG 3704071 .. 3704090 + -10.7  -5.01553   ATAATCCCCCTTCAA            GGCGCTG CATCGA CAGCGCC             TTTTCTTTATAAATT 100 37
HHJ42_RS18140 NONE
HHJ42_RS18145 3711638 .. 3711659 + -11.6  -3.29043   TCCATTAAAACACAG           CGGGCAGT GATGCA ACTGCCCG            TTATCGACACGACTT  83 33
HHJ42_RS18150 3712132 .. 3712151 +  -9.3  -3.11732   TAAAGCTTTATTAAA            GGGGGAA ACGGTA TTCCCCC             TTAGATGCGTTTCAA  68 164
HHJ42_RS18155 NONE
HHJ42_RS18160 NONE
HHJ42_RS18165 3717192 .. 3717203 +    -3  -3.07816   GGCTTGCGGAGAATC                TTCA GTCA TGAA                 TTCACTACGTCCGGA  43 15
HHJ42_RS18170 3719281 .. 3719297 + -10.9  -3.46081   TATCCTATATAGCCC              CTGGTGA GAG TCACCAG              TTCCTTGATTAAATA  81 104
HHJ42_RS18175 3720030 .. 3720042 +  -4.1  -3.72027   GATGCGTAATTTTTT                CAGCA CGA TGTTG                TTATTAATGCGACGT  56 267
        mlrA NONE
HHJ42_RS18200 3724221 .. 3724231 +  -6.8  -2.90496   CCGTAAAGGATCAAG                 GCGA TAA TCGC                 TGGTTTCAGACCAAA  54 379
         dld 3732049 .. 3732065 + -10.8   -5.8096   GCCGTCTGCCCCGCC              GCCGCC ATTTG GGCGGC              TTTTTGTTTTTTATA 100 92
HHJ42_RS18245 3734525 .. 3734538 +  -4.5   -4.4009   CACCATGCCTGATGC               GACGC TGGC GTGTC                TTTTCTGGCCTAACC  66 88
        yohP 3737382 .. 3737421 + -17.2  -2.71364   TTCGCCAGAGCCCGG  GGGTGCAGGGGGAGGA GGCGATTG TCCTCCCCCTGCGCGC   TCCTTGCGCCAGTGG 100 268
HHJ42_RS18270 NONE
HHJ42_RS18275 3739816 .. 3739826 +  -6.8  -4.82154   GGCTAAAATTTGCGA                 TGCG TCG CGCA                 TTTTTGATGTAAGTT  80 35
         cdd 3740888 .. 3740904 + -10.9  -4.15044   TGGTGTCGAAAATCC              CGGCAAA CAG TTTGCCG              TTTCTTGCGCAAAAC  86 93
        sanA NONE
HHJ42_RS18290 3741949 .. 3741967 +  -6.2   -3.3782   TTTTCCCTTTTCTGT             TAATTATT GAG AATAATTA             TTACTTCACTCAATA  59 43
        preT NONE
        preA 3744696 .. 3744727 +   -13  -2.98487   TTGTGCTCATTGTAG      GCCGGATAAAACGC GCCA GCGTTGCATCCGGC       ATTTGGTTCCTGTCG  86 129
        yeiG 3752845 .. 3752860 + -11.8  -2.56271   CTGAAGTGAAAGTCC              GCCCGG TTCG CCGGGC               ATCTTCTCATCAGAA  79 32
HHJ42_RS18355 NONE
         nfo NONE
HHJ42_RS18365 3761201 .. 3761224 + -11.8  -3.92324   TAATCCCCAGAACCA          GTCGGTATCA ATAG TGATGCCGAC           TTTGGTATTGGCGGG  90 347
        yeiL 3763189 .. 3763203 +  -5.6  -3.57144   CAATGGTCTTGACAT               CCAGCG TGC CGCTCG               TTTGCAGATAGGGCG  58 298
        setB 3772327 .. 3772346 +    -5  -3.97443   TGCCCGAAAGGCCCG            TCGCGA GTACTTTG TCGCGA             TATTTTTGACATTTT  61 377
        yeiP 3772974 .. 3772993 +   -10  -5.46129   GCCGCTTGCAGAAAA            GGGATAGC TCAG GCTGTCCC             TTTTTTAATTTATTA 100 46
HHJ42_RS18425 3774653 .. 3774691 +  -8.1  -4.03183   TTTAACGATTTCTGC   GGTTAAAGCGGATGAAG CTCGC CTTCGTCCGCTCTCCCC   TTCTCTTTTCTGCCT  74 36
        yeiR NONE
        lpxT 3776847 .. 3776858 +  -2.2  -5.61596   AGGTAATTAGTCTCG                TGTC GCTT GGCA                 TTTTTTTATAACGAT  86 374
        mepS 3777526 .. 3777543 + -11.3  -5.85244   ACGAGTTAACTGAAA             GCACTGC TTAG GCAGTGC              TTTTTTGTTTTCATT 100 75
HHJ42_RS18445 NONE
HHJ42_RS18450 NONE
HHJ42_RS18455 NONE
HHJ42_RS18460 NONE
        yejF 3784900 .. 3784911 +  -2.2  -3.53012   CATGTTGCAGCAAAT                TCGT CCTG GCGA                 TTTACAAACAGGCAC  47 105
HHJ42_RS18485 3789402 .. 3789427 +  -7.5  -2.70525   AAAGCAGATCACTTA         CCTGTTGCTGG GTCG CCTGTAGCAGG          ATTAATTTAAGAGAG  58 103
        rplY 3789749 .. 3789778 + -15.9  -2.90219   TTGCTGAATAAGTTG       TAAAAAACCCCGC TCCG GCGGGGTTTTTTG        TCTCTGCAAATTATG 100 41
HHJ42_RS18500 NONE
        pbgA 3793056 .. 3793092 +  -6.7  -3.18634   AGACGAGAAGCGTTT    TATCGCTAACTGATTAA TTA TAAATCAGTTAGCAAAA    TATCTTACTTGCAAT  59 13
HHJ42_RS18510 3793235 .. 3793252 +    -7  -5.76633   AAAATCCCAAGAAAA             CCAACC TATTGC GGTTGG              TTTTTTTATATCTGC 100 41
        narP 3795088 .. 3795116 +  -8.8  -5.35815   CGGGGCACAATAAAA        ATAGCCCGATGG CATCA CCATCGGGCCAC        TTTTTATTTACTCTC 100 28
         eco 3808255 .. 3808291 + -15.2  -2.71011   CCGACGCTGAAAGCA    TACGCCACATCCGGCA AACCA TGCCGGATGTGGCACA    TCATTACAACGCAAT  93 125
        rcsD NONE
        rcsB 3820048 .. 3820081 + -14.7  -3.55622   GACTAATCACCTGTA     GGCCAGATAAGACGC GTTA GTGTCTTATCTGGCA      TTTGCACGGATTGCC 100 35
        atoS 3825350 .. 3825379 +  -5.7  -3.17146   GAAGTGGAAACCGCC       GTCGAAGCACTACG CTG CGGAGC-CTTCGAC       TATGTTATCAAACCG  54 295
        atoD NONE
HHJ42_RS18670 NONE
HHJ42_RS18675 3829344 .. 3829356 +  -5.5  -2.66008   ATTGTGTCATCGTCA                GTGCG GTA CGTAC                TGCTATCGGTAGTTT  50 78
HHJ42_RS18715 3843547 .. 3843591 + -12.3  -3.53811   ATGCGACGCTTGCCG CGTCTTATCAGGCCTAC AAATGCTCCCC GTAGGCCGGATAAGGCG TTTACGCCGCATCCG  93 69
        nrdA 3850485 .. 3850502 +  -7.7  -3.88291   AGCGTGAACGCCTTA             TCCG-GCC TAC GGCTCGGA             TTTGTAGGCCTGATA  72 146
        nrdB NONE
        yfaE 3851985 .. 3852035 + -13.5  -3.07113   AATCGAGATGTGAAT TGGTTGTAGTGCCAGATACAACGC TTAT GCGTCTTATCTGGC-CTACAACGA TTACATGGCGTAGTA  87 28
        glpA NONE
        glpB NONE
        glpC 3859938 .. 3859965 + -13.6  -4.65895   TAAACTCCTTTCTGA        TGCCCGGTAAGCA TGT TG-TTACCGGGCA        TTTTTGCGTACACGA 100 38
HHJ42_RS18775 NONE
HHJ42_RS18780 3861272 .. 3861296 +  -2.7  -3.84825   CCACTAATTAACACA          GGCCCACAG CCGATCC CCATGGGCC          TTTGATATCAATAAC  52 34
        nudI 3868732 .. 3868753 +  -3.7  -4.79352   ACGACAACCGGGTGC           TGCTGTGCCA GTC TGGC-CAGTG           TTTTATTGTCGATAC  73 512
        arnB NONE
        arnC NONE
        arnA NONE
HHJ42_RS18840 3874358 .. 3874395 +  -9.2  -2.60615   GTTATTTCGAAAAAC   CCATTGCCGGATACTG GATTAA CAGCATTGGGCAATGG    CTATTTGGCGCGAAT  66 209
        arnE NONE
        arnF 3876689 .. 3876714 +  -6.1  -2.58667   AATCCCCCACTTTCA         CGGCGAAGTCA CTCT TCACTTCGGCG          ATCATTTTTATCGCG  50 168
         rbn 3885813 .. 3885831 +   -11  -3.28712   GCTTATTATTAAAAA             CAGGGCGA AAC TTGCCCTG             TTATCGCAACCCGCG  80 45
HHJ42_RS18910 NONE
HHJ42_RS18915 NONE
HHJ42_RS18920 3887750 .. 3887768 + -11.7    -2.981   GGGCACCAAAAAAAA             CCGCCGA ACATG TCGGCGG             CTTTCTGACTTACAA  80 49
        alaA 3906532 .. 3906558 + -13.8  -3.28791   CTGTAATCTTAATTT         CACTGCCGGA GATTGCA TCCGGCAGTG         TTATCCCGCCACAAT 100 35
        yfbR 3907213 .. 3907260 +  -8.5  -3.28712   CGCTGTAAGCAGCCG GAGTCTG-CGTCGCATCAGG CAATAAGCA CCGGATGCGACATCAGGCTC TTGTCAAAACGGAAA  69 33
        ackA 3912417 .. 3912444 + -16.4  -4.36914   CTGACTGCCTGATTT        CA-CACCGCCAGC TCA GCTGGCGGTGCTG        TTTTGTAACCCGCCA 100 29
         pta 3914673 .. 3914695 +   -15  -5.64304   CTGCGGATATCTGAA           CCGGAAATAG TCA CTATTTCCGG           TTTTTTATTCTATTA 100 66
        yfcC 3916352 .. 3916369 + -12.7  -5.32944   CACTAAAAATGTTAA             GAGCCGC GATT GCGGCTC              TTTTTTCATTCTGCC 100 35
        yfcG NONE
        folX NONE
HHJ42_RS19065 3920613 .. 3920625 +  -6.2  -3.98214   AATGCACGGAAACGC                CGGG CATCC CCCG                TTTGTAATACGTAAT  65 296
         flk 3937131 .. 3937146 +  -2.5  -3.54424   GTGCGGTGCCGCGAA              CGTGT GAGGGG ACGCG               TTTAACCACCTCCAC  47 198
        mnmC 3941811 .. 3941822 +  -7.2  -3.30124   TTGTTTGTCGGATGC                GGCG TAAA CGCC                 TTATCCGACCTACGC  63 53
        smrB 3947453 .. 3947476 + -18.2  -2.89177   GCATGACATAACGGA          CAACGGGGCC TGAT GGCCCCGTTG           TGTGGTGTATACGCT 100 308
HHJ42_RS19270 NONE
HHJ42_RS19275 3963198 .. 3963211 +  -2.3  -2.58767   ACACACAATCCTGAT               CGCGA AATA TGGCG                TGACTTGATACTTCA  39 197
HHJ42_RS19280 3963450 .. 3963464 +  -2.8  -4.23674   GCTATCGACAACAAC               CGGAAA AAG TTTACG               TTTATATTGCTGAAG  58 89
HHJ42_RS19295 NONE
        dsdA 3970140 .. 3970150 +  -5.4  -3.53224   TATCTGGCAAAAGGC                 CGTT AAT AACG                 TTTCAACGCAGCATC  57 20
        evgA NONE
        evgS 3977589 .. 3977615 + -10.9  -3.34517   AATGACTAAATAGCG         GCTCCCACAAT GTTCA AATGTGGGAGC         TATTTACCAGCACAT  80 32
HHJ42_RS19340 3980139 .. 3980165 +    -3  -4.05033   TTATGCCTTGAAAAA        AGCCGAAG-GT GAAAAG ACACTTCGGCA         TTTATGTAAAATCAA  56 248
HHJ42_RS19370 3985923 .. 3985944 +  -2.3  -2.71744   CCTTTGCGATAGCGT           CTG-TCACCT GGC AGGTGAACAA           TCATGTCTGATGCTG  40 29
        lpxP 3987545 .. 3987572 + -11.4   -5.4756   TCCCTCCTCAAATCA        GCCATAATAACC TCAT GGTTTTTATGGC         TTTTTTCTTAAGGTT 100 59
        ypdK 3987961 .. 3987980 + -13.6  -3.89215   CTGTGCAATGAAAAA            CAGGAGCC ATCA GGCTCCTG             TTTGCATTTCTGGCG 100 45
        ypdA NONE
        ypdB NONE
HHJ42_RS19405 3993405 .. 3993418 +  -2.3  -3.30701   TCTTCCGGCGCAAAC               GCGGT AAGT AACGC                TTCAATTTCCTGCGC  45 497
HHJ42_RS19440 4001912 .. 4001923 +  -7.2  -3.09516   ATATTGCGTTAACAG                GCCG CTGA CGGC                 TTCGATCGTGAAGGA  60 105
HHJ42_RS19445 4002307 .. 4002320 +  -8.1  -3.30124   CACAATGCCTGATGC               GACGC TAGC GCGTC                TTATCAGGCCTACAA  65 59
        nupC 4005194 .. 4005239 + -16.3  -3.17212   CTGGTGCTGTAAGAC CATACATAAAAAAGCCGGGGA TAAT TCCCCGGCTTTTTTACGCCTG TTAATCAGCTAATGG 100 29
HHJ42_RS19475 NONE
HHJ42_RS19480 4008809 .. 4008831 + -12.7  -4.51238   AGCATAAATAAAAAA           CGGCAGGGG TATCT CTCCTGCCG           TTTATCTTTTATGCG 100 34
HHJ42_RS19490 NONE
HHJ42_RS19495 NONE
HHJ42_RS19500 NONE
HHJ42_RS19505 4010933 .. 4010947 +  -8.5  -5.24989   CACCAATGTAAAAAA               GCGCC CTAAA GGCGC               TTTTTTGCTATCTGC  95 36
HHJ42_RS19530 4015337 .. 4015359 + -13.5  -2.56571   TAATTTCTGATTGAT           TACTGCCGG AGCTC CCGGCAGTA           TGAATTCACTCTATA  86 31
HHJ42_RS19540 4017395 .. 4017427 +  -2.8  -4.25104   CTTAAAGCGGACGCT     TC-AGGGGCTGGAC CAGTTGC GTC-AGCCCCTCGG     TTTTAATCAGCAGCG  58 36
        cysZ 4021719 .. 4021735 +  -6.5   -3.7347   TTGTGTGAAACAGGG              GGGGC TTATACC GCCCC              TTATTCCATCTTGCA  64 68
        cysK 4022861 .. 4022876 +    -9  -5.26316   AAAATGCGTAAAAAA              GCACCT TTTT AGGTGC               TTTTTTGTGGCCTGC 100 54
        ptsH 4023462 .. 4023485 +  -4.5  -4.11692   GTTAAACTGATGGCG          GAACTCGAG TAATTT CCCGGGTTC           TTTTAAAAATCAGTC  61 14
        ptsI NONE
         crr 4025815 .. 4025832 + -12.7  -5.71983   TGCCGCAGTGAAAAA             TGGCGCC CATC GGCGCCA              TTTTTTTATGCTTCA 100 45
HHJ42_RS19590 4027535 .. 4027550 +  -4.6  -3.66018   ATAAAGCGTGACACG              CCGGTG ATAG TGCCGG               TTGTTCCCATGCTGG  55 398
        murQ NONE
        murP 4035702 .. 4035729 + -13.5    -3.767   AAGCAGTAATAAAAA        GGCCAGTCAGT TGTGTT ACTGGCTGGCC         TTTAATCAATGAATC 100 152
        amiA NONE
        hemF 4040718 .. 4040752 +  -7.1  -4.02456   TTCTCGCAAAATGTC    GCCAGCGCCTGTTGGAC AAA GCCCCACAG-CGC-GGC    TTTATGCTGCTCTTT  70 512
         tal NONE
         tkt 4061327 .. 4061340 +  -8.1  -3.30243   ACGTGGGCCAGGCGT               CTGGC CCAT GCCAG                TTATCGCAGGTGGGT  62 134
        narQ NONE
        acrD 4070323 .. 4070341 +   -11  -3.52009   CAACTTTCCGATTAA             GAACCTGC TCA GCGGGTTC             TTGCTGTTTGTACTT  81 79
HHJ42_RS19795 NONE
        dapE 4072284 .. 4072299 +  -5.4  -2.82623   CGTATCATGGAACAG              CTCGTC GCCT GATGAG               TGGTTCTGCAAGAGG  50 14
HHJ42_RS19805 4072531 .. 4072580 +  -4.1  -3.30124   AGAAGTAAGCTAAGT GGCCGGATAAGGCGTTAACGCCG CATC CGGCCATGATGCCTGATACAGTC TTATCAGACCTACCC  50 33
HHJ42_RS19840 NONE
         bcp 4080607 .. 4080621 +  -5.6  -3.73775   TTGCCCATCAGGCCA               GGCGTG AAT CACGGC               TTTGATCAGCGTCGC  61 154
        bepA NONE
        arsC 4083734 .. 4083748 +  -7.1  -3.30124   CACATTGCCGGATGC               GACGC TTGCC GCGTC               TTATCCGGCCTACGA  63 65
        purM NONE
        purN 4088646 .. 4088665 + -10.7  -4.74504   CCCCCGTAGTTAAAG            CGCCAGC TCTGCC GCTGGCG             TTTTTCAATTCACCT  95 43
        ppk1 NONE
         ppx 4092418 .. 4092446 + -18.2   -3.6279   CGCCGCTTAATGCTT        TGCGGGCCGACG AGAAA TGTCGGCCCGCA        TTATTCAGGCACTTT 100 31
HHJ42_RS19910 4095389 .. 4095420 +  -3.8  -4.94222   CGGCTGCGAAATAAA      TACATCATTAATAC ATAT GTTGTGATGATGTA       TTTTTATAAATTATT  74 177
HHJ42_RS19915 NONE
HHJ42_RS19920 4096666 .. 4096685 + -12.2  -4.80178   CGTGAGTATAAAAAA            CCCTCTGT AGTA ACAGAGGG             TTTTGTTCATTCATA 100 70
HHJ42_RS19950 4101755 .. 4101769 +  -7.1  -5.65177   ACTAAGTGGCGCATA               CCACG CCAGA CGTGG               TTTTTTTATGCGTAT 100 163
HHJ42_RS19955 4102903 .. 4102917 + -12.8  -3.71552   TTCGTCCACAAAAAA               GCCCGC GCT GCGGGC               TTCTATTAATGCAGT 100 337
HHJ42_RS20060 4122412 .. 4122429 +  -8.3  -5.44119   TCATTGCTTCCAGTT             CGCCCGG TTCG CCGGGCA              TTTTTTTAAGGTGAG 100 188
HHJ42_RS20065 4122892 .. 4122909 +  -9.8  -5.24129   GACATGTCACAATCA             GCCCGC CGATTC GCGGGC              TTTTTTATGCAAAAG 100 47
HHJ42_RS20145 4132047 .. 4132062 + -11.8  -5.49234   TTTTTCAGTAAGTAA              GCCGCC TTCT GGCGGC               TTTTTTATTGCCTAT 100 48
HHJ42_RS20150 NONE
HHJ42_RS20155 NONE
HHJ42_RS20160 NONE
HHJ42_RS20165 NONE
HHJ42_RS20170 4134714 .. 4134739 +    -4  -3.25204   GGCACTGGAGCAAAT         GGTCAGGA TGGTACTTAT TCCTGGCC          TCTGTTTCAGCATGG  48 53
HHJ42_RS20175 4135364 .. 4135376 +  -4.8  -3.39327   TGTGGTAGTCGACAA                CCAG ATAAA CTGG                TTATGGGTATGGGAC  54 294
HHJ42_RS20185 4136195 .. 4136215 +  -2.6  -4.67697   TGTACGGTGAAGCCC            TGAATATG CTCAC CATCTTCA            TTTATTATTTTCACC  66 291
        xseA 4142105 .. 4142120 +  -4.6  -3.39841   GCTGGTTACTGGAAG              CAGGTC ACCA GACCCG               GTTTATTTATTAGCG  52 104
        sseA 4171424 .. 4171467 + -18.4  -2.90194   AAAATAAGCTTTTTA CAGGCAATAAAAAACCGCCG AATT TGGCGGTTTTTTATTGCTGG TCTGGTTCGCGGCCT 100 34
        suhB 4181682 .. 4181693 +  -5.8  -3.18264   TGACGAGTTAAGCGA                CGCT CTGA AGCG                 TTAATGACTCAGGCG  54 10
HHJ42_RS20345 NONE
        csiE 4184423 .. 4184439 +  -7.9  -3.17212   TTGCACCACTATCAA              CCACGGC AAC GCCGTAG              TTGCTCCCATAATGC  61 281
HHJ42_RS20360 4186106 .. 4186117 +  -7.2  -3.30124   AAAGATGCCGGATGC                GGCG TAAA CGCC                 TTATCCGGCCTACCG  63 42
HHJ42_RS20395 4196509 .. 4196526 + -11.3  -5.01732   GCGATAACGTAGAAA             GGCTTCC CGAA GGAAGCC              TTTTTTCAACAGATT 100 45
        hmpA 4199310 .. 4199320 +  -3.2   -3.0623   CGAATGCTTTGGCCC                 GCAT AAG GTGC                 TGTGATTTGATGTTG  45 10
        mltF 4209689 .. 4209704 +  -3.2  -4.10552   AATCTGTCGAGGATT              GCGC TTTTTTCT GCGC               TTTAATTTCCTGGCG  57 39
HHJ42_RS20450 NONE
        yfhL 4212386 .. 4212415 +  -5.6  -3.11999   TTTATAGTTATTAAA       GGCGCGTCCGAT TGGTTC ACCGGATGCACC        TTAAGTACGTTTCCT  52 170
        nadB 4224472 .. 4224492 +  -3.9  -4.08216   AATGCCAGCAGCACC            CGATGCG GCAGTCG CGCTTCG            TTTTCCGCCACATCC  60 137
        srmB 4226552 .. 4226577 + -15.5  -4.82901   ACAGAAGAGTAATCT         CAATGCCGGGT TTAA GCCCGGCATTG          TTTTTATCCCGGCAA 100 29
        eamB 4228162 .. 4228185 + -16.8  -3.22884   TATTAACGAAAAAAA          GCGGAAGAGG TCGC CCTCTTCCGC           TTAGTAACTTGCTAC 100 35
         ung 4229600 .. 4229625 + -14.7   -3.0169   AATTTGCAGGAAAAC         GCCGGATGGCA GCGT TGCCACCCGGC          TGATTTATCAGGCTT  89 40
        trxC 4231303 .. 4231323 + -14.7  -4.50976   TCTCTTTAATCTTAC            CGGGGCGCA TCT TGTGCCCCG            TTTTCTCCTCTGCGA 100 32
HHJ42_RS20570 NONE
         pat NONE
        pssA 4236231 .. 4236247 +  -9.4  -5.04249   ATCCTGTAATCACAA              CCCCGT CCTGT ACGGGG              TTTGTTTTTTGGAGG  93 32
HHJ42_RS20585 4237071 .. 4237085 +  -3.6  -3.39803   GCATGCATTCCCGCA               GTATTT ACC AGATAC               TTCTGCATATAAGTG  48 503
        bamD 4251683 .. 4251701 + -11.7  -5.94214   ACCTGAAACACAAAA             CGGCAGC CTTGA GCTGCCG             TTTTTTTATTCTGTT 100 46
        raiA 4252299 .. 4252314 + -11.8   -5.4505   TGAGTGTATCGCCAA              CGCGCC TTCG GGCGCG               TTTTTTGTTGACAGC 100 51
HHJ42_RS20650 4252473 .. 4252493 + -11.8   -5.5112   GAAGACGAACAATAA            GGCCTCCC AAATC GGGGGGCC            TTTTTTATTGATAAC 100 49
        pheA 4253691 .. 4253718 + -18.6  -2.67428   CAACCTGATGAAAAA        GTGCCGGATGAT GTGA ATCATCCGGCAC         TGGATTATTACTGGC 100 33
HHJ42_RS20670 4256529 .. 4256542 +  -2.4  -4.14927   AAAATCAATTAAGCA               TGAG ATTTTA CTCA                TTATGTTTTATTTCT  55 51
HHJ42_RS20675 NONE
        dgcN NONE
HHJ42_RS20685 4258909 .. 4258930 +  -7.1  -3.62224   AAACAGACAAAAAAA           GGGCCAGCC AATT GGCCAGCCC            TTCTTAACAGGATGT  67 50
HHJ42_RS20715 4263433 .. 4263448 +  -2.6  -2.99273   AAACCCAGAAAAGGA              GT-TTCC CCT GGAACAC              ATTTCTACTACTACG  43 39
HHJ42_RS20720 4264733 .. 4264758 + -16.9  -3.10244   GCGGAGTAACGAAAA         CGGCCCGGCAT TCGC ATGCTGGGCCG          TGATTTATTACGAAA 100 32
        nadK 4266415 .. 4266434 +  -2.2  -2.56601   TATAAAACCAGTTTA            TACTGT ACACAATA ACAGTA             ATGGTTTTTCATACA  39 65
        recN NONE
        bamE 4268644 .. 4268660 + -12.3  -5.46276   AAAGACGTTAAAAAA              GGTGCTC AAT GAGCACC              TTTTTTCTGTCTGTT 100 57
        smpB NONE
        ssrA 4270657 .. 4270682 + -16.1   -5.4492   GGTGAAGTACAGAAA         GCCCGCATGGC ACAA GCCCTGCGGGC          TTTTTTGTGTCTGTC 100 62
HHJ42_RS20765 4271987 .. 4272008 + -13.1  -3.86944   GGTATAAAAGTAAAA           TCATAGGGC TTTC GCCCTATGA            TTTAATAATTATAAA 100 20
HHJ42_RS20790 4277890 .. 4277904 + -11.4   -4.9725   TCACAGGCGACATAT               GACGCG CCA CGCGTC               TTTTTGTGTCGCAAT 100 154
HHJ42_RS20800 NONE
HHJ42_RS20805 NONE
HHJ42_RS20810 4279111 .. 4279138 +  -8.5  -3.01712   ACCCGAAAAATTAAA        TGTGCGTATTC GCGCAG GGATACGCACG         TCTTCAGGAGACGCA  66 53
HHJ42_RS20815 NONE
HHJ42_RS20820 4281904 .. 4281921 + -12.7   -5.1675   CATCATGACTCATCT             GACCGGC ATCT GCCGGTC              TTTTTTCATCCCTGA 100 42
        csiD NONE
        lhgO NONE
        gabD NONE
        gabT 4288148 .. 4288187 + -10.8  -3.53811   GGAGGCGACGCTGCG  CGTCTTGTCCGGCCTACGA GAA TCC-AGGTCGGATAAGGCG  TTTACGCCGCATCCG  81 55
        gabP 4289756 .. 4289785 +  -2.9  -2.71119   CATAATACGCGCTGA       TAATGATCA-GGAG TCA CACCATGACCATTA       CTTCTCTGGATGGCT  41 26
        csiR 4290466 .. 4290488 +  -8.4  -4.63184   AATACGCAACACTTG           CCCCGGGTAA ATT TTATCCGGGC           TTTTTAGCATCGGTT  88 53
HHJ42_RS20865 4291616 .. 4291626 +  -3.2  -3.54935   TATTGTCCGTAAGGA                 GTCA CTA TGGC                 TTTGACAACCATTTC  50 29
        ygaP 4292313 .. 4292330 +  -6.2  -5.40072   GATGAATTTATATTT             CGCCGG ACGCGG CTGGCG              TTTTTTTACCAGCGC  91 192
        alaE 4293726 .. 4293748 + -19.2  -3.42283   CCTGACCCTTCTTTT           CGCGACTGGC ATC GCCAGTCGCG           TCTTTAACTGGCTTC 100 36
HHJ42_RS20890 4294609 .. 4294629 + -16.9  -5.15969   AATACGCGTCTTTGA            CCCCGAAGC CTG GCTTCGGGG            TTTTTTAGCTTAAGG 100 57
HHJ42_RS20900 4296058 .. 4296077 +  -6.3  -3.27177   AACAGAGAGACAACC            CGACGCG TATCAT CGCGCCG             TATCTTCATTTTAAA  57 185
        nrdH NONE
        nrdI NONE
        nrdE NONE
        nrdF 4299961 .. 4299985 +  -7.2  -5.15381   CTCTGTTGCATTATT          CGCCTGAA ACCACAATA TTCAGGCG          TTTTTTCGCTATCTT  86 141
        proV NONE
        proW NONE
        proX 4303520 .. 4303552 + -10.6  -2.87931   AAGTAATTTTTATTC     G-GGCGGATAAGGCG TTTT TGCCTCATCCGCCGC      TCTGTACACAATGCC  75 35
HHJ42_RS20940 NONE
        ygaZ NONE
        ygaH NONE
        emrR 4306741 .. 4306764 + -12.5  -4.56597   AAAGAAAAAATAACC          GGCCAGCAT CGTAAC ATGCTGGCC           TTTTTGGCAAGCAGG 100 73
        emrA NONE
        emrB 4309558 .. 4309577 + -12.2  -5.24129   ACTAAGTACAACTAA            GCCAGTTC ATTT GAACTGGC             TTTTTTGTGCACAGA 100 36
        tnpA 4310266 .. 4310286 + -12.5  -3.72494   AGGCGCATTTGAAAA            ACCTCCGGC TAT GCCGGAGGA            TATTTATTCAATTAA 100 106
        srlA NONE
        srlE NONE
        srlB NONE
        srlD NONE
        gutM NONE
        srlR NONE
        gutQ 4326627 .. 4326664 +  -4.9  -3.55444   TTAATCCTTCAATCC  CAGACGTTTCGCCAGCC GATGCA GGTTGGCG-A-CGTCGG   TTTCCAGCATCCGCG  56 37
        norV NONE
        norW 4330923 .. 4330968 +   -12  -3.53811   GATGCGACGCTGGCG CGTCTTATCCGACCTACG GGGACGCATG TGTAGGCCGGATAAGGCG TTTACGCCGCATCCG  88 66
        ascF NONE
        ascB 4338269 .. 4338280 +  -7.2  -3.30124   AACCGTGCCGGATGC                GGCG TGAA CGCC                 TTATCCGGCCTACAA  63 43
        hypA NONE
        hypB NONE
        hypC NONE
        hypD NONE
        hypE 4351371 .. 4351387 + -13.7  -3.72576   AGTCAATGACCTTTT              GCACCGC TTT GCGGTGC              TTTCCTGGAAGAACA 100 65
HHJ42_RS21210 4353965 .. 4353993 + -16.1  -4.78326   AGCGTAAGCGCCGTA        TTTGCCGGAGAGT ATG GCTCTCCGGCAGA        TTTATTTCTTTGGAC 100 34
        mutS 4357193 .. 4357219 + -15.3  -3.01924   CTGGTGTAATAATAA         TTCCCGATAGC CTTTT GCTATCGGGAA         TATTAACGACAACTG  93 32
        pphB 4358164 .. 4358190 +  -4.2  -3.58536   ACAGACCAAAACTCG         CTGGCGGCTGGC ACT GGCAATCGCCCG         TTTCACCGTGACTTT  53 241
HHJ42_RS21235 NONE
HHJ42_RS21240 NONE
HHJ42_RS21245 NONE
HHJ42_RS21250 4362583 .. 4362600 + -11.3  -2.56095   CGTACCCATACATCC             CCCCATC TACG GATGGGG              TAGGTTAACTATAAC  77 63
HHJ42_RS21255 4364061 .. 4364093 + -10.8  -4.35926   TAATGTATGCCAATA      TTAACCTCGGTA ATATCTCGC TACCGAGGTTAA      TTTTCACTTTGCAAT  90 88
HHJ42_RS21265 4366097 .. 4366118 + -10.1  -2.91924   ACCAAAAGAAAAAAA           GCCAGCCTC GCTT GAGACTGGC            CTTTCTGACAGATGC  72 162
        queD NONE
HHJ42_RS21360 NONE
HHJ42_RS21365 NONE
HHJ42_RS21370 4385006 .. 4385020 +  -7.1  -3.30124   TTCAGCGCCTGATTC               GACGC TTGAC GCGTC               TTATCAGGCCTACAA  63 101
HHJ42_RS21400 4391846 .. 4391857 +  -2.2  -3.58533   TGATTGGATTCCTGC                CGGA TGTC TTCG                 TTTAACCGATTATCG  49 9
HHJ42_RS21405 4393645 .. 4393681 +  -7.5  -3.08088   AGCAGCGTTTATGCT    TTAATTGCTAAACCGAT TTA ATTTGTTTAGCAGTTAG    TATATTGGAGCCTTT  60 138
HHJ42_RS21410 4394696 .. 4394711 +  -5.4  -3.19568   GCGAAAATAATTGCT              CTGGCT AAAA AGTCAG               CTTTATTATCAATAC  54 104
HHJ42_RS21415 4396312 .. 4396329 + -11.3  -4.26903   TTTTAATACCAGACA             GCCTCAC GGAT GTGAGGC              TTTTACTGAAATAAC  93 35
HHJ42_RS21430 4400193 .. 4400214 + -10.9  -4.27443   CGTCACTATCTTGCA           TCGCCCCTGT AAA AC-GGGGCGA           TTATTTTCATCCTGA  88 44
HHJ42_RS21440 NONE
HHJ42_RS21445 NONE
HHJ42_RS21450 4403766 .. 4403783 +  -4.8  -3.25729   CGGTTCTTCAGGAGG             CGG-CGG TTCAT CCGACCG             TTGGTGATCGTTATG  52 1
HHJ42_RS21455 4404684 .. 4404703 + -13.6  -4.66609   CTCAACCATAAAAAA            TGCCAGCC CGAA GGCTGGCA             TTTTTAAATCAGATA 100 41
        barA 4416089 .. 4416120 + -10.9  -4.67943   GCGTTTGGCATCAGT      CTCAAACCGGCTC CAGATA GAGCCGGTTTTGG       TTTTCTGTCTTAACG  95 215
        queF 4424292 .. 4424318 +    -3  -2.57931   ATAAATTTTTTCTCA         ATTTTGCGTG CTGGATT CACGCAGAAG         GTTGTGAAAGGTCAG  40 37
        ppnN 4425767 .. 4425788 + -10.1  -4.72556   CGTAATCTCCCCTCC           CCCGGTGAC GTTT GTTGCCGGG            TTTTCTCATTTTTGG  91 36
        sdaC 4427611 .. 4427630 + -12.8  -3.27786   CAGCTAAGTCCTTTC            GCGCCGCT TTCG GGCGGCGC             TTCCTCCGTTTTAAC  90 34
        sdaB 4429040 .. 4429058 +  -7.4  -3.08774   TAATCGCTCTCCAGA             GGCCTC TTTTTGC GAGGCC             TCTTCCCGATTTCTC  60 38
         xni 4429948 .. 4429979 +   -10  -2.59564   TTAATGCACTTGTAG      GCCGGATAAGACGC GCCA GCGCCGCATCCGGC       ATTATCACATCCGCG  70 79
        fucP NONE
        fucI 4435557 .. 4435584 + -12.9  -3.01791   ACAAGCAAGAGTGGT        TAGCCGGATAA GCAATG TTATCCGGCTA         TATTGCAGGAGCGAT  86 90
        fucK NONE
        fucU 4437457 .. 4437475 + -13.1  -2.60212   AATCTCATACCGGTA             CGCCCGC ATGAC GCGGGCG             GTTATCGAATGATGG  84 39
        fucR 4438247 .. 4438268 +  -8.6  -3.21993   ACGGAAAGGGTAGCA           GGCCGGAG ACGACG CCCCGGCC            TTACCTGTTATCGCT  67 40
        csdA NONE
        csdE 4443127 .. 4443164 + -12.7  -3.92542   GGTTTAAGCACAGAA   CCAGGTCGGATAAGACG TTCG CGTCGCATCCGACCTGA    TTGTTTACCCCTGAC 100 34
HHJ42_RS21635 NONE
HHJ42_RS21640 NONE
HHJ42_RS21645 4445676 .. 4445700 +  -7.2  -5.54079   TAGAATGCTGACAAA         CCGCAAAGCTA CTAT TGGCTT-GCGG          TTTTTTCGTTTTTAC 100 47
        tssB NONE
        tssC NONE
        tssK NONE
HHJ42_RS21665 NONE
HHJ42_RS21670 4452071 .. 4452087 +  -6.5  -2.75183   GTGAAATAAAACATA              CCGCC GGAAGAA GGCGG              TGCTTCAATCACACT  53 32
HHJ42_RS21675 4452621 .. 4452642 + -14.5  -4.31766   CCGCCTGATAACTGC           GGCAGACAG GAAA CTGTCTGCC            TTTCTGTTGTGTGCT 100 33
        tssH NONE
        vgrG NONE
HHJ42_RS21690 NONE
HHJ42_RS21695 4459733 .. 4459747 +  -2.8  -3.81954   ACAATGGCGAGAGTT               CATTGA GTT TCATTG               TTGATTTATTTTGAA  52 216
        vgrG NONE
HHJ42_RS21705 NONE
HHJ42_RS21710 NONE
HHJ42_RS21715 4465747 .. 4465758 +  -3.6  -3.64357   TGGCTGGCGTGATTG                CCGC AGGC GTGG                 TCTTTCTGATTATCA  51 194
        tssA NONE
HHJ42_RS21730 NONE
HHJ42_RS21735 4472797 .. 4472811 +  -2.8   -3.6761   TCTAAAACTTTATCT               GGATAT CAT ATCTCC               TCTTTATTGAAGAAA  50 417
        tssF NONE
        tssG NONE
        tssJ NONE
        tssE NONE
HHJ42_RS21760 4478334 .. 4478358 + -11.5  -5.88197   TAGAATGCTGACAAA          CCGCAATGTGT TCT ACAAATTGCGG          TTTTTTTGTATTTAA 100 267
        argA 4486706 .. 4486750 + -10.7  -3.37761   GGTAAGCGATGAAAA TCGTCGGATGCGACATGCG TAACACT CGTGCGTCGCATCCGGCAA TTACGTTTATTCCCG  80 36
        mutH NONE
HHJ42_RS21865 4507295 .. 4507309 +  -2.8  -3.77484   AGGGCGTACTCACTC               CTGTTA CCC TCACAG               TTTAAGATTTTCCTG  52 64
        ygdR 4507616 .. 4507642 +  -7.3  -2.81421   ATTGAACGTTAACAA         ATAAGGTCAGC ATCCG GCTGGCCTTAA         GATTTTTCTCTTTCC  58 29
HHJ42_RS21875 4508762 .. 4508789 + -12.8  -3.13403   ATCCTGCACCATAAG        ATTAACGCCGGT TAAA ACCGGCGTTAAA         TATTAATGACGGCGC  86 27
        galR 4513793 .. 4513827 +  -9.3  -3.28791   CCAGTAATTCTTCAA    TGGTCTGGCGACGG CGAATCAA CCG-CGCCTGACCA     TTATCAAACAGAACT  69 64
        lysR 4516482 .. 4516495 +  -2.3  -3.94811   GAGCAACGAGACTCA               ATGGC ATCC GCCAC                TTTGTGCATCGTATT  54 427
HHJ42_RS21930 4523207 .. 4523248 + -17.7  -4.35461   TTTAGCTAATATCCG TTGTGGATGGTTCAAAATTG CGT CAATTTTGAACCATCC-CAG TTTTCATAATGTTCA 100 32
        xdhB NONE
        xdhC 4528507 .. 4528528 + -15.9  -3.31799   CGAAGTAAAAGGATA           TCCGGCCTG AATT CAGGCCGGA            TTCTCAGAGGTTATG 100 33
        ygeW 4531990 .. 4532011 + -13.7  -3.24232   GTGAAATAACCCCTC           GGGCCGATC AGCT GGTCGGCCC            TCTATTTCCAGAGGC  93 32
        dpaL NONE
HHJ42_RS21975 4534524 .. 4534543 +   -15  -4.71482   ACTCTTCACTTATTC            CCCTCCGG TTCG CCGGAGGG             TTTTTGGAGTTTGCT 100 43
        hydA NONE
        arcC 4536930 .. 4536957 + -12.7  -4.54727   TTGTCAGTAATTTAA        AGGCCGGATGG GTAATA CCATCCGGCCA         TTTTCATTTAAGCCA 100 31
        mocA NONE
        ygfK 4543495 .. 4543505 +  -2.4    -2.867   TCATTATCTGCTGGG                 CCGC GTG GAGG                 TGTAATCATGTTGAT  41 10
        ssnA NONE
HHJ42_RS22015 4546071 .. 4546087 +  -2.2  -2.64091   GTCTGTTTAGCCGCG              ATGCTG GCTGG CAGCAA              TACTATCAGGTCATT  39 425
        xanQ NONE
        guaD NONE
        ghxQ 4552848 .. 4552869 +  -8.7  -5.24129   GCTATCTAATAGATT           CTCCGCG CCTTTCAA CGCGGAG            TTTTTTATCAAAGAG  95 32
        uacT NONE
HHJ42_RS22055 4557317 .. 4557333 +  -7.2  -3.35798   TTTACCTGTCGACAT              CCGCTC AAAAC GGGCGG              TTGTCGATAAACGCT  59 47
         idi 4557971 .. 4557988 +  -8.3  -3.31263   ATCACAATTAAAAAA             CCCCGAC ATTT GCCGGGG              TTGTGAGCATAACGT  69 30
        fldB 4564735 .. 4564764 + -10.7  -3.77188   TACGCCTGATGTCAC       TGACGGCTTAGCA CATA TGCTTTGCCGTCA        TCTTTATCTTTGCGT  85 32
        ygfZ 4566652 .. 4566686 + -14.4  -2.80859   GAAGAGTAAATCTCT     GTATCGCATCAGGC ATTTATC GCCTGATGCGACAC     TGGTGTGTCTTTTCA  87 32
        bglA 4569461 .. 4569474 +  -9.5  -3.90318   TTAACAAGCGAAAAA               GGCGC CGAA GCGCC                TTTATAAGATAGTCG  81 152
HHJ42_RS22145 4574741 .. 4574768 +  -6.3  -2.62263   TCCATAAAGCCGAGA        TTTACCCCCTG CCCCGC CAGCGGGTGAA         TAGTATGCGCGGCGT  50 394
        zapA NONE
        ssrS 4579481 .. 4579497 +  -5.1  -2.80344   GTTACAGCCTGCGGC              GGCATCT CGG AGATTCC              CTTCTTACCTGGCAC  49 9
HHJ42_RS22180 4580466 .. 4580488 + -13.4  -3.66908   GAAGGGATAAAAAAA           CGGGCAAGTC AGT GACCTGCCCG           TTAATTTTCAGAGAA 100 371
        argP 4583990 .. 4584012 + -12.1  -3.45434   TAATCCATCAAATAA           CGCCTGATA GCACA TATCAGGCG           TTATCCTCACTTCTT  88 38
HHJ42_RS22250 4593292 .. 4593306 +  -5.6  -4.13767   CAGTGAGGTTTTCTT               ATGGCG CGT CGCCAC               TTTTCCAGTCAGGCA  65 52
HHJ42_RS22255 NONE
HHJ42_RS22260 NONE
HHJ42_RS22265 NONE
HHJ42_RS22270 4596050 .. 4596074 + -15.7  -3.73775   TGCGCCCCACCAGAC          GCTCCCGCAAC GCA GATGCGGGAGC          TTTGATAAAGATCGA 100 161
HHJ42_RS22305 4602054 .. 4602071 + -14.1  -3.28924   TGCCAACAATCTGAA             GGGCCGC ATTT GCGGCCC              TTCTCACAAAACATC 100 205
        loiP 4605143 .. 4605174 +  -8.6  -3.14931   GTAGTGCCGAACGTA      GGTCGGATAAGGCG TTCA CGCCGCATCCGACA       TTAATGACACATCAC  67 47
HHJ42_RS22340 4609615 .. 4609625 +  -8.2  -4.36914   GCTTTTTATTTAAGC                 CGCG CGC CGCG                 TTTTATACCCCACAA  79 28
        metK 4611093 .. 4611111 + -11.7  -5.48213   TCACCTGCTTTCAAA             GGCCAGC CTCGC GCTGGCC             TTTTTCTTTTACCTC 100 48
        galP 4612926 .. 4612938 +  -4.7  -3.07787   GCTTCCTCCCATCAT                GGAGG AAG CCACC                TCTTGCAGTCATCTT  49 50
HHJ42_RS22355 4613590 .. 4613614 +  -5.7  -4.07568   CCGTTATTTGTCTAT          TGCTGCGGT GGTACTG AGCGCAGCA          TTTTCCGGCCCGGCA  65 140
        rsmE NONE
        gshB 4616089 .. 4616129 +  -2.3  -5.00616   TCGTTGAGACTCTGA  GTGACAGCGCCCTTCTTTC CAC GCATACTGGGCGCTGTTGC  TTTTTTGAACCAGGA  69 62
HHJ42_RS22375 NONE
        ruvX 4617198 .. 4617209 +  -7.2  -3.30124   TTTCATGTTGGATGC                GGCG TAAA CGCC                 TTATCCAACCTACAG  63 83
        yggS NONE
        yggT NONE
HHJ42_RS22400 NONE
HHJ42_RS22405 NONE
        hemW 4621746 .. 4621758 +  -2.7  -4.26076   CGTTCATTAGCCTGG                TTGAT ATC GTCAA                TTTTCATCAAAATCG  60 154
        mutY 4627173 .. 4627184 +  -3.6  -3.55761   TACAGCAGTTACGCA                CTGG CGCG CCGG                 TTTAGCGCGTGAGTC  50 9
HHJ42_RS22445 4627498 .. 4627521 +  -8.9  -3.05384   TAAAAAATAAAAACA          GT-GCCGGAG CACGC CTCCGGCAAC          TTGCATAAAAACAAA  68 31
        mltC 4628780 .. 4628795 +  -2.5  -4.57569   GAATCGCATCATCTC              GCACG GTCAAA TGTGC               TTTTTCAAACACTCA  63 169
        nupG 4630099 .. 4630142 +   -14  -3.34013   TTAGCCACTAATTAC GCAAAGAAAAACGGGTCGCC AGAA GGTGACCCGTTTTTTTATTC TTACTTCAACACATA 100 30
HHJ42_RS22465 4633356 .. 4633369 +  -3.7  -3.65351   TGCCCCTTTCCGCCG               CCTGG ACCG CCTGG                TTTGCCTGACAATGC  53 3
HHJ42_RS22470 4633739 .. 4633779 +  -4.4  -5.76237   TCAATCAAATCCAGC T-TATACACAAAGTTGA-TA AAA TAGTCAACTTTGTGTAAATA TTTTTTATTTATATC 100 205
HHJ42_RS22555 4646938 .. 4646957 +  -3.6   -3.4945   AGCCACAAAACTAAA            TTTTGCAG CTGG CTTCAAAA             TATTATTAGTTAACT  50 43
HHJ42_RS22640 4663070 .. 4663082 + -10.5  -3.54475   TCACACCACTGACGC                GCGGC CTA GCCGC                TTGTCTGCTGACAGA  77 46
HHJ42_RS22705 4690059 .. 4690071 +  -3.3  -2.77899   CTAATAACGGATATC                CATCC GAA GGAGG                TAATTAATGAAACCG  43 6
HHJ42_RS22710 NONE
HHJ42_RS22715 NONE
HHJ42_RS22720 4693937 .. 4693963 +  -3.1  -5.16071   TTGTTCTGCGTATTG         TCATTGGTA CTTATAGTA TGCCAATGA         TTTTTATTGGTGCTT  74 238
HHJ42_RS22735 4697702 .. 4697715 +  -5.3  -2.88544   TGAAAGAAGACAATA               TTCAC CATC GTGAA                TCTCTGGGACTCACC  50 114
HHJ42_RS22745 4700448 .. 4700467 +    -5  -3.10409   TGCCCACATCCTTAA            TCTGACCAC GCC GTGG-CAGG            TTAAATCCCTTGCTC  51 474
HHJ42_RS22775 4707338 .. 4707359 +  -6.7  -2.60508   AGAGAATTTCGAGTC           CGTTTAC-CA TGC TGTGTAAACG           CCTTTTTCAAAAGTG  55 126
HHJ42_RS22780 4708090 .. 4708100 +  -2.4  -3.95772   GCGTAAGAAACACTA                 AGGC AGA GCCC                 TTTCCATTTATTATT  54 422
HHJ42_RS22810 4711726 .. 4711740 +    -5  -3.30007   CTTTATCATTATATA               TCACAT TTA ATGTGG               TTATAACGAGCTCTT  54 82
HHJ42_RS22815 4712310 .. 4712323 +  -3.8  -4.03995   CTGCATCCACTTCCC               GCTG AAACGC CAGC                TCTTTTTCTGCCCAG  59 60
HHJ42_RS22835 4715241 .. 4715263 +  -7.1   -4.1021   TTGATGCGCCTTAAA          GTCTGTCCTG CTGA CAG-ACAGAC           TTTCTCATTGTCGCC  72 157
HHJ42_RS22855 4719618 .. 4719649 +  -7.2  -3.14564   GATGATGCAGATTTC      GTTACGGAAAGCGA AATA TCGCGTTCCGGACC       TTCCTACCCGGATAA  62 130
HHJ42_RS22885 4726399 .. 4726409 +  -2.4  -3.67188   TGATGCATAATGACT                 GCGG CTG CCGG                 TGTTTTACGCTGAGT  49 191
HHJ42_RS22895 4728853 .. 4728876 + -10.4  -2.75712   TTTTTTATGCCGGCG          GAACCATCAGC CAG GCTGA-GGTTC          TCATTCAATAACTCA  71 105
HHJ42_RS22930 4735231 .. 4735261 +  -5.5   -3.5125   GCCATAAACTTCATT      CAGCCTTC-TTGCT GTCC GGTAACGGAGGCTG       CTTTTTCGTTACACC  57 217
HHJ42_RS22950 NONE
HHJ42_RS22955 NONE
HHJ42_RS22960 4740531 .. 4740541 +    -4  -3.39856   CATCACTGTCAGATT                 TATG AAC CATA                 TTCGTTACCTGTATC  50 372
HHJ42_RS22970 4742419 .. 4742452 +  -2.6  -3.02144   CGCCTGCGCCATCAG    CCAGCTTATC-A-TTC AGTA GAAGTTGATAAGCGGG     TGTTGCCAGAGCTGC  42 323
        iucA NONE
        iucB NONE
        iucC NONE
        iucD 4749259 .. 4749273 + -11.4   -3.9693   GCACCTAGGGAAAAC               GCAGCC GGA GGCTGC               TTCTTTAACTCGCTA  91 33
        iutA 4751558 .. 4751605 + -12.9   -2.8547   CTTTTGCAACAAGGG TATGCTGTAAACAACATGGTC CTTGGT GGCCATGTTGTTTACAGCCAG TATAATATACAGCCT  86 49
HHJ42_RS23065 4764033 .. 4764073 + -13.3  -3.33492   ATGCACTTAACCTAA  TACGTTGCCACTGTTCCGC CAG GAGTTGCAGTGGCAACGTA  TTCTACCGTCAGTGA  95 230
HHJ42_RS23075 4767854 .. 4767872 +  -5.9   -3.4178   ACGGAGGCAAGAGCA             GCCCTGC ACATG GCAGCGC             TTGTGGTAACCTGGT  56 193
HHJ42_RS23085 4768494 .. 4768507 +  -3.9  -4.89233   TTACAAGGAAATAAT               CAATT GATA AATTG                TTTTTGGTATTAATA  74 501
HHJ42_RS23090 4769825 .. 4769844 +  -2.1  -3.27525   AATTAAGCAACGGGG            TGCGAGA GGTTAG TCTCTCA             TTGAGTTTGCGCCCC  44 39
HHJ42_RS23095 NONE
HHJ42_RS23100 NONE
        kdsB NONE
HHJ42_RS23110 4775483 .. 4775496 +  -2.4  -3.65199   GCAAATTAATTATGT               TCTG CAAGGT CAGA                TTTGGCTAAACAATT  49 3
HHJ42_RS23115 4777011 .. 4777023 +  -4.8   -4.1021   GACGCAGCGTATTAA                TCCC TTTTT GGGA                TTTATCATTATCACA  63 291
        glcC 4812317 .. 4812336 +  -2.9  -3.33151   CGCCCCAATGCGTTC            CA-GCATG TTATT CATGCCTG            TATTGGTTTCGAGGA  47 89
HHJ42_RS23270 NONE
HHJ42_RS23275 NONE
HHJ42_RS23280 NONE
HHJ42_RS23285 4817864 .. 4817890 +   -18  -3.99878   AAGCAGTAATGTGAG         CCCGCTGTGGTG TTG CGCCACGGCGGG         TTTAATGTTGTCTGT 100 32
HHJ42_RS23325 4825258 .. 4825280 +  -9.1  -4.08692   AGTCAAAAATGGAAA           TGCCCGATC GCCAG GACCGGGCA           TTTTCAGGAAGGTTA  80 39
        yghU 4830064 .. 4830075 +  -7.2  -3.78775   GGATAAAGCATTTAC                GCCG CATC CGGC                 TTTAATCATCACGCG  68 75
         gpr 4839423 .. 4839437 +  -2.8   -3.1811   ACGTCAGATGGATAA               TGACGT ACC ACATCA               GTTTGTTATCCGGGA  45 139
        yghA 4840921 .. 4840953 +  -8.4  -5.34381   GCATTTAGGTTAAAA      AAATGCCCGGTTGT GAAAA GCAACCGGGCATCA      TTTTTATTTCGCTTT 100 28
        metC 4843589 .. 4843609 +  -3.3  -3.29459   TTGGACAATTTTGCA            GACATTTTA TTG TGAAAAGTC            TTAAATTGTTGCGTC  48 52
HHJ42_RS23425 4844372 .. 4844397 + -14.8   -3.5486   CCTGACGATTTTCCC         CGTTCCCGGT TGCTGT ACCGGGAACG          TATTTAATTCCCCTG 100 36
        yqhD 4846718 .. 4846741 + -16.8  -3.25823   TTAAGTTCACAACAC          CTCACCGGAG CCTG CTCCGGTGAG           TTCATATAAAGGAGG 100 86
        dkgA 4847602 .. 4847630 + -10.9  -3.05775   TAACGTGCAAATTAT        CCCGGTGGCGGTA ATG TTCCGCTACCGGA        CTTTTCAGAAATCAT  76 38
HHJ42_RS23445 NONE
        yqhH 4849032 .. 4849058 +   -13  -4.15748   AGAATGATAAAAAAA         TCCCCGGCAGCA TTC TGTTACCGGGGA         TATTTTTTAACGTCC 100 34
HHJ42_RS23460 4852300 .. 4852327 +  -7.7  -2.52896   ACCTTCATTAGTCCA        GAGCTGGCG GAAAAAATAA CGCCGGCTC         TGCCTTCCGCCCTCC  59 40
HHJ42_RS23465 NONE
HHJ42_RS23470 NONE
HHJ42_RS23475 NONE
HHJ42_RS23480 4857179 .. 4857195 +  -9.4  -4.25283   TATGTAACCCTAATG              GGCAGG TAATT CCTGCC              TTTTCATGGAAGACT  84 34
HHJ42_RS23485 NONE
HHJ42_RS23490 4859040 .. 4859071 + -17.5  -3.22091   GCATACTGAGTAATT      TTCAATGCCCCAC CACTCT GTGGGGCATTGAA       TTGGTCCATTACGGT 100 56
        qseB NONE
        qseC 4869666 .. 4869697 + -14.6  -4.30576   CTGGTAACTTCTCTG      TCTATGAGAGCCGT TAAA ACGACTCTCATAGA       TTTTACTAATAGCAA 100 34
        mdaB NONE
HHJ42_RS23555 4871292 .. 4871316 + -14.3  -3.66578   TTAATCCTGCCTTGT          TTGCCCGGCCA TCC TGACCGGGCAA          TGTTCTTTCCTTTAA 100 37
        tolC NONE
HHJ42_RS23590 NONE
HHJ42_RS23595 4879412 .. 4879439 + -14.2  -3.67558   GTTGAATAAGCCACG        ATACCGGATGGC ACTC GCCATCCGGTAA         TTGTTAGCCTATCTG 100 32
        zupT 4881162 .. 4881182 +  -9.8  -3.31322   AAAACAACATCAGAA            GTTGTCCA GCGCA TGGACAAC            TTCTGCCAGCTTCAC  74 40
HHJ42_RS23620 4882970 .. 4883008 +  -4.9  -4.24397   ACATTCGTCTTTAAT  GCACTGTAAATTATGA ATTAATCC TC-TAATTTATAGTGC   TTTCTATTACCTTAT  65 41
HHJ42_RS23625 4883795 .. 4883818 + -12.4  -2.72379   TTACGAGTAATCGCA          TTTGGCCGGG TTCG CCCGGCCACA           TCATTAACGGATTAA  82 31
HHJ42_RS23630 NONE
HHJ42_RS23635 NONE
HHJ42_RS23640 4888206 .. 4888221 + -11.8  -3.53164   ATACAAACACTAAAA              CGGGCC ATCA GGCCCG               TTATATCAGTGCTCT  88 47
HHJ42_RS23650 NONE
HHJ42_RS23655 4891032 .. 4891054 +  -8.4   -5.4251   CTCTTCCAGGAATAA           TCCCTGGC CCAAAAA GCCGGGGA           TTTTTTATATCTGCG 100 44
HHJ42_RS23660 4891409 .. 4891431 +  -8.4   -5.4251   TTTCATTAACACATA           TCCCTGGC CCAAAAA GCCGGGGA           TTTTTTATATCTGCG 100 106
        ibsE 4891792 .. 4891812 +  -3.2  -3.80552   TACGAAGCGAGATCT            GTGAACCG CTTTC CGGTTAGC            CTTTTTTATCCTGTT  53 114
HHJ42_RS23685 NONE
         cca 4899732 .. 4899743 +  -7.2  -3.63515   TTGATTGCCGGATGC                GGCG TGAA CGCC                 TTATTCGGCCTACGC  67 140
        plsY 4902126 .. 4902140 +  -5.7  -2.63479   GACCGTTCCCCAACT               CCCAT ATTCC ATGGG               TCATATCGCGCTCTT  47 352
        ttdA 4903846 .. 4903856 +  -2.4  -3.29144   AAAATCTGTCTCACA                 CCCG GAG CGCG                 TTATGAAAAAGATCC  45 9
        ttdB 4904472 .. 4904491 +  -9.3  -4.57073   TCAAATAACCCTCCC            GGAGAGG CTCACC CCTCTCC             TTTTTCGCAGGCATA  88 33
        ttdT 4906151 .. 4906176 +  -3.9    -5.243   GTACAAAATTCCGGA         CGC-GCGTAGAA CAC TTCGCCGCGGCG         TTTTTTCATCATTTC  84 201
        rpsU 4907532 .. 4907558 + -10.9  -4.40882   AGTTGTAGTTGTAAG        GCCGTGC-TTCC GAAA GGAATGCGCGGC         TTATTTTCGTTTATG  90 73
        dnaG 4909440 .. 4909452 +  -4.8  -3.28269   CGTAATTATCGTTGG                CGGT AAACA ACCG                TTGGATTTCAGCGTT  54 125
        rpoD 4911432 .. 4911450 + -11.7  -5.24129   GGCCCTCTGCACAAA             CGCCACC TTTTC GGTGGCG             TTTTTTATCGCCCAC 100 81
HHJ42_RS23755 4912173 .. 4912194 + -14.5  -5.71295   ACCAGATATAGCAAA           GGCTGACGA GAAA TCGTCAGCC            TTTTTCTTTTTATAT 100 37
        nfeR 4914059 .. 4914088 + -11.3  -3.57144   TTAATGCAGTACCGT       CACCGCGTCTTCC AGTC GGCTGGCGCGGTG        TTTCACCATCGCCGA  87 194
        ygjG 4917367 .. 4917399 + -12.8  -4.82901   AGAAGCGTAATATCA      AATCGGATGGCGAT ACGAC GTCGCCATCCGATC      TTTTTATACGACGCG 100 31
        ebgR 4918944 .. 4918986 +  -7.8  -4.73614   ACCCGTTAAATCCCC TTACA-CACTGTCCGGCAA TCGTTT TTGCCGGACAGTGCTGCCG TTTATTTTCGTGATC  85 32
        ebgA NONE
HHJ42_RS23795 NONE
HHJ42_RS23800 4924180 .. 4924216 +  -8.3  -4.04922   TAAAAAATGAGCAGG   C-ATTTTCCCTCTTCCT GGATG AGGA-GAGGGAAAATAG   TTTCTGCCTTTATAT  78 50
        ygjJ NONE
        ygjK 4927749 .. 4927760 +  -7.2  -3.30243   ACTGCTGGCGGATGC                GGCG TAAA CGCC                 TTATCCGCCCTACAT  63 47
        fadH 4930180 .. 4930214 + -10.6  -2.50816   GATTTAAATCGTTAT     TTGAAGCGCCGGATGC AAC GCATCCGGCACGTCGC     GTTAATCAATAAACA  74 34
HHJ42_RS23835 NONE
HHJ42_RS23840 4933710 .. 4933724 +  -2.8  -2.87564   AGCATGGCTGTCCGG               CGCA GAAATAA TGCG               TATCTGCGCACGTCG  42 15
HHJ42_RS23845 4934943 .. 4934962 + -10.8  -5.56673   CCGGGCAACCCGAAA            GGAATACG CAGA CGTATTCC             TTTTTTGTTGTAAGT 100 183
         alx 4936186 .. 4936200 +  -5.7  -5.30189   CCAAACGGGGCGAGG               GGACT GACCG AGTCC               TTTTTTGATGTTGTC  83 178
        sstT 4937685 .. 4937709 + -14.3  -4.44974   TAATTAATTGTTTAA          CCCCTTTCGTC TAC GGCGGAAGGGG          TTTTCTCAACTTTAA 100 34
        exuT 4943042 .. 4943059 + -12.7   -4.7497   TAGTTTCCCTTCAAA             GCCGCCT TCTC AGGCGGC              TTTTTCATCACTGCG 100 57
        exuR 4943930 .. 4943949 + -10.7   -4.0942   GAAATTCCTGTCCGA            CAGGCGC TGCAAT GCGCCTG             TTTGTCTCGTCGGTA  86 39
HHJ42_RS23885 NONE
        mzrA 4945373 .. 4945400 + -10.6  -3.48924   ACTGTCTATGATTAA        TGAGGCGGTGGT TAAC ACTACCGCTTCG         TTGTCTGGACAATCG  81 88
HHJ42_RS23895 NONE
HHJ42_RS23900 NONE
HHJ42_RS23905 NONE
HHJ42_RS23910 4946874 .. 4946892 + -12.4  -3.37071   GGTTAACTTCCCTCT             GGCCGGAG CCA TTCCGGCC             TTATCCCTCAAATTT  90 35
HHJ42_RS23915 4947470 .. 4947487 + -11.3  -4.87626   CTTAACGATAAAAAA             CGAGGAG GAAG CTCCTCG              TTTTTGCTATTGGAG 100 53
        yqjG 4948504 .. 4948521 + -11.3   -2.8664   CTTCGGTTAAAAAAA             GGCACCT TACG AGGTGCC              TCTGATAATTAGCTA  78 31
HHJ42_RS23925 4949171 .. 4949193 + -10.6  -4.60977   AAAACAAATCTGCTC           GCCGGATG TCTGACT CATCCGGC           TTTTATCATTATGTT  95 39
HHJ42_RS23930 4949765 .. 4949782 + -12.7  -5.07486   ATTAATCTTAGAATT             GGGGCGA TATT TCGCCCC              TTTTTATTAACAATA 100 36
HHJ42_RS23940 NONE
HHJ42_RS23945 4951713 .. 4951724 +  -7.2  -3.30124   CAGGTTGCCGGATGC                GGCG AAAA CGCC                 TTATCCGGCCTACAA  63 44
        tdcR 4964217 .. 4964231 +  -4.2  -3.59402   TTTTGATCGGCGTAG               GCCACA GAA TGTTGC               TTCGTTTACTGTAAC  53 157
HHJ42_RS24000 4964856 .. 4964870 +  -2.9  -5.23396   CTTTTTTTCACCCGA               TCATT TTAAT AATGA               TTTTTATTGATTATT  76 1
        garD 4973372 .. 4973389 +    -7  -5.38549   ACGTCCCTCGCAAAA             CATGGC CTTAGT GCCATG              TTTTTATTGTTTAAA  91 53
        prlF NONE
        yhaV 4974313 .. 4974324 +  -4.4  -3.01712   GTTCACAATGCCCGC                CGAA CGCA TTCG                 TGTTGACCAGCGGGC  49 45
        kbaZ NONE
        agaV NONE
HHJ42_RS24065 NONE
HHJ42_RS24070 NONE
HHJ42_RS24075 NONE
        nagA 4980441 .. 4980464 +  -3.2  -5.12987   TTTGCTCCTTTATTG          GGCCTTCAC TTCCCCC GT-AAGGCC          TTTCTTTTTCTTTCG  74 44
HHJ42_RS24085 NONE
        kbaY 4982832 .. 4982853 + -10.9  -2.56596   ATTTATCCCAATGTA           CTTCCCGAT TAAT ATCGGGGAG            TGCCTTAATGGAAAA  74 57
        agaB 4983552 .. 4983562 +  -6.8  -4.63592   TGGGGATTGATTTTT                 GGCT GGA AGCC                 TTATTTTTATTCCGC  79 134
        agaD 4985822 .. 4985835 +  -2.3  -4.42386   GCTCTCTATTGTTTG               TTCCG CATT CGGCA                TTTTGTAAATGGAAC  59 4
HHJ42_RS24115 4986676 .. 4986719 +  -2.5  -4.22524   AAATAACATTTGACT GGGTTGAACATAACGCC GATAGCAAAA GGAGTTATGTTCAACAA TTTAATTTTAGATAT  58 102
HHJ42_RS24120 4987592 .. 4987621 + -19.5  -4.50241   ACCGTTAATACGTTA       GGGCGTTATCTGA CCTG TCAGATAACGCCC        TTTTCCTTCCTCTTT 100 33
HHJ42_RS24125 NONE
HHJ42_RS24130 NONE
HHJ42_RS24135 4992110 .. 4992126 +  -6.5  -5.00616   ACGCCGTGAATTTCT              GCGGC CAGCGCC GCCGC              TTTTTTCAGCGGCAG  81 129
        lpoA NONE
HHJ42_RS24150 NONE
        diaA NONE
        yraP 4996585 .. 4996599 +  -7.1  -3.30124   TGTAATGCCTGATGC               GACGC TTGCC GCGTC               TTATCAGGCCTACAA  63 49
        yhbO 4999331 .. 4999341 +  -8.2   -5.4833   CGGCCCACTCATCTG                 CGCG TGG CGCG                 TTTTTTCTTCCGTCA 100 287
        yhbQ 5000181 .. 5000192 +  -4.4  -2.87132   ACATAGCCAATGACC                TGAC CTTC GTCA                 TCTGTCGCCACCAGC  47 361
HHJ42_RS24200 NONE
HHJ42_RS24205 5002961 .. 5002975 +  -2.9  -2.87501   TATATAGCTCACTTT               GTTAA CAACT TTAAC               TACTCTTTAATGCAG  42 42
HHJ42_RS24210 5004411 .. 5004421 +  -2.4  -4.07568   TGGCGGGGCAAAGGT                 CAGC AAT GCCG                 TTTTCAAGCGGCCCA  56 404
        argG 5019569 .. 5019589 +  -8.9  -3.25356   GTAATTCGACATCAA            CCCTGCCCT TCA GGGGTGGGG            TTACCTTGATTATCC  70 37
        yhbY 5027755 .. 5027769 + -12.8  -5.13137   TGTTCGTTGATAAAA               GGCCGC ATA GCGGCC               TTTTTCCTTTCTTTA 100 118
        dacB 5029988 .. 5030006 + -13.1   -4.3534   TAGCCTAAAGAGAAA             CCCCGGC ACATG GCCGGGG             TTTTGCTGATTAACG 100 38
        ispB 5034129 .. 5034147 +   -16   -2.7386   AATCCCCTCCCCTCA             TCCCGCGC AGT GCGCGGGA             TGATTCCAGTAAATT 100 39
        sfsB 5034942 .. 5034957 +  -5.4  -3.68827   GGCACATGCATAAAG              CGGTTT TCAA AGACCG               TTTCGGTGATGAATC  58 341
HHJ42_RS24395 NONE
        kdsD NONE
        kdsC NONE
        lptC NONE
        lptA NONE
        lptB NONE
        rpoN NONE
         hpf 5045928 .. 5045952 + -12.9  -2.95459   TAGCATGTGCATGGC          GGTCTGTTGTG CGG CACAACGGGCC          ATTTGTACGGTTAAT  86 54
        ptsN 5046520 .. 5046534 +  -2.1  -3.28712   GTAGTTATTCGGTAA               TGTCT CTTTT AGACG               TTGTGAGGAGAAACA  45 37
        rapZ NONE
         npr 5047665 .. 5047686 + -10.3  -2.79671   CTTTAACTCTGGTTT           TGATGAAGA TTAA TCTTCATCA            CTTTGACATTCAAAT  71 13
        yrbL 5048822 .. 5048834 +  -3.3  -4.07687   TCCCCAGCGTTAATC                CGGCT TCC AGCCC                TTTTCGAACCCAGCT  58 324
        gltB NONE
        gltD 5060072 .. 5060094 + -16.4  -3.85817   CGAGGTAACAATAAA           TTCGCCAGAC AGT GTCTGGCGAA           TTTATAAAACGAGCT 100 42
HHJ42_RS24540 5070027 .. 5070045 + -12.4  -2.83517   ACTAATTTATTTTTC             GGGCGCAG CCA TTGCGCCC             TCCTCTTCTCTCCCT  82 36
        degQ 5071547 .. 5071576 + -10.7  -3.11192   CGTTAATGTCGTAAA       CCGGGCATCAGGC TGAC GTGTGATGTCCGG        TTAACTCGTGGTATG  76 35
        degS 5072717 .. 5072734 +  -9.1  -5.55769   GTAAAAAAACAAAAA             CCGGAGT CTGT GCTCCGG              TTTTTTATTATCCGC 100 48
        argR 5074603 .. 5074633 +  -9.6   -3.4243   CCAGGAGCTTTAATC       TCTGCCCCGTCGCT TCT GGCGGCGGGGAAAA       TGTTGCTTTTGCCTA  75 28
        yhcN 5075255 .. 5075271 + -15.1  -5.44721   TTGTCCGACGATATT              GCCCCCG GTT CGGGGGC              TTTTTTTGCGCTAAT 100 53
        aaeR 5080062 .. 5080076 +  -4.2  -3.90744   CTGGCCCACGCCAAC               CGGCAA ACT TTGCCC               TTCTTTACCGCAGAC  58 213
HHJ42_RS24635 5093594 .. 5093605 +  -4.4  -2.71924   TCGCACGCTGGTGAA                GGTT AACT AACC                 ATTTAGCAGGGAATA  47 16
        accB NONE
        accC 5096460 .. 5096486 +  -5.1  -5.10208   AAAGAACGTAATCAA         CGCCGGG CCTGTTAATGCTA CCCGGCG         TTTTTATTGCCGTTA  79 74
HHJ42_RS24685 NONE
HHJ42_RS24690 NONE
HHJ42_RS24695 NONE
        panF NONE
        prmA 5107914 .. 5107928 +  -6.4  -3.86202   CCATCTCAGAGGATT               GGTCAA AGT TTGGCC               TTTCATCTCGTGCAA  66 271
        dusB NONE
         fis 5109314 .. 5109339 +  -8.2  -5.29782   ATGCTTGATTAAAAA         GGCGCTACTC GGCATG GGGAAGCGCC          TTTTTTATAGGTGTC  91 55
        yhdJ 5110268 .. 5110278 +  -3.2  -2.94202   AAAGGAAGTGTAAGC                 CTGG TTT TCAG                 ATTATTCATTTCGTG  44 39
HHJ42_RS24725 5110531 .. 5110555 +  -4.5  -4.13911   GAATTTATATGACAC          TTAATTCAT TCGTTTT ATGAATTAA          TTTCGTTATGTTTTC  61 39
        acrE NONE
        acrF 5115869 .. 5115884 +  -8.2  -5.80951   AATCAGAAACATAAA              GGCGCT TTCA GGCGCC               TTTTTTATTTTCAGT 100 40
HHJ42_RS24745 5116336 .. 5116355 + -12.8  -4.59773   CGAAATAACTAAACA            GGGCGCGG AGCT CCGCGCTC             TTTTTAACGATACAG 100 33
HHJ42_RS24750 5117801 .. 5117822 + -13.7  -3.07233   TCGGTGTGAGGTAAC           GAGCGTCGC TACG GCGGCGCTC            TCTTCAGCGTTATGC  87 42
HHJ42_RS24755 5119009 .. 5119019 +  -2.4  -2.71731   GAATATCTATAACCG                 CCGC ATC GCGA                 TCGTTGAACGCTAAG  40 1
HHJ42_RS24760 NONE
HHJ42_RS24765 5120932 .. 5120964 + -15.8  -3.60473   ATGTTAGTTCGAAAA     GCAAAAAGGCCATCC TTTC GGATGGCCTTTT-GC      TTGATTTGATGTCTG 100 45
         rrf 5120932 .. 5120964 - -15.8  -4.11394   ATGTTAGTTCGAAAA     GCAAAAAGGCCATCC TTTC GGATGGCCTTTT-GC      TTGATTTGATGTCTG 100 36
        acrS 5110191 .. 5110205 -  -5.6  -5.21683   AGTGAAAAAAAGAAA               GACCGG CAA CCTGTC               AAAACGAAGCCGGTT  88 340
HHJ42_RS24680 NONE
HHJ42_RS24675 5101039 .. 5101059 -  -6.9  -3.28791   ACCTCGGTGTCACAA            CAAAACGCC AAT AACGTTTTG            TTGTGAGGTGAAGAT  61 46
HHJ42_RS24670 NONE
HHJ42_RS24665 NONE
HHJ42_RS24660 NONE
HHJ42_RS24655 5095995 .. 5096013 -    -8  -4.00756   GACCTGATCAAAGAA             CAGCTGCG TAT CGCTGCCG             GTCAACCGCTGTCGA  74 515
        csrD 5090521 .. 5090544 -  -3.8  -4.14243   TATTCTACGTGAAAA          CGGATTAAAC GGCA GGTTAAACCG           AGTATCTTTGTGAAT  59 18
        mreB 5089152 .. 5089179 -  -8.4  -2.66316   TCTCGTATCAGACCA        GGCAGGGTAAAC AGAC ACTTCCCCTGCC         TGCATCCGATTACTC  63 35
        mreC NONE
        mreD NONE
        yhdE NONE
         rng 5085443 .. 5085463 -  -2.4  -2.63208   TGTGACTCAAAAACC            CTTTGCCG GATGG CGGCCCAG            CATCTGTTTACATCA  39 33
HHJ42_RS24600 NONE
        tldD 5079903 .. 5079916 -  -2.3  -3.86897   GTTACGTTGTACAAA               CCTGT GCCA ACGGG                TTCCCCTCACCCTAA  53 111
HHJ42_RS24585 NONE
        aaeA 5077628 .. 5077644 -    -3  -3.95584   TCGTGATTAACCAAA             CTCA-CG CAGG CGATGAG              CCATTTTACGGAAGA  54 0
        aaeB 5075620 .. 5075638 -  -9.5  -5.17353   ATAGCCATGAAAAAA             CCGACGC TTCGG GCGCCGG             TTTTGACTTAACTAT  93 33
HHJ42_RS24570 5075253 .. 5075273 -  -8.1  -2.78384   TCTTGTCCGACGATA            TTGCCCCCG GTT CGGGGGCTT            TTTTTGCGCTAATGA  60 34
         mdh 5072711 .. 5072740 -  -9.4  -5.44119   GTCAGCGTAAAAAAA       CAAAAACCGGAG TCTGTG CTCCGGTTTTTT        ATTATCCGCTAATCA 100 42
        zapE 5068254 .. 5068276 -    -4  -2.77088   AGGATTATAGAGAAG           TCGGGGTCAA AGA TCGACCCCTT           TTTGTGATTTGTGGC  45 46
        rplM NONE
        rpsI 5067189 .. 5067202 -  -9.5  -5.64274   TTAGCCATAAAAAAA               CCCGC CGAA GCGGG                TTTTTTCGCAAATTG 100 64
        sspA 5066214 .. 5066224 -  -3.2  -2.60797   TCCATACAGATTAAC                 TCCG GCC CAGA                 CGCATTTCACGTTCT  42 10
        sspB 5065681 .. 5065697 -  -9.4  -4.41353   TGACAGATAGCAAAA              CAGGCC ACATG GGCCTG              TTTTCATTTTACTTC  86 34
        nanR 5064719 .. 5064734 -  -2.6  -2.91276   GCTTGTCTGATAAAC              GATATA CCTT TATACC               TGTTATACCAGATCA  42 98
        nanA 5063745 .. 5063794 - -10.9  -2.89683   ATTGTAGGGTACAGA TGCGTTTATTTCCCCTCACCCG GTAGGGG CGAGCGAGGGGAAAC-AACTCA CCCGCGCTCTTGCAT  75 23
        nanT 5062166 .. 5062185 - -10.7  -2.78679   TTCCCTTAGCGAAAG            GCCCGGT ACAGAG ACCGGGC             AACAGGATTAACTTT  74 33
HHJ42_RS24495 NONE
        nanK NONE
HHJ42_RS24485 5060068 .. 5060098 -   -20  -3.69283   TAAGCGAGGTAACAA       TAAATTCGCCAGAC AGT GTCTGGCGAATTTA       TAAAACGAGCTATCC 100 50
HHJ42_RS24470 NONE
        arcB 5050033 .. 5050043 -  -2.4  -3.90048   GCGGCCTGAAAAACA                 GTGC TGT GCCC                 TTGTAACTCATCATA  53 110
        elbB NONE
        mtgA 5048080 .. 5048093 -  -5.9  -3.06162   GACTGGAGTGGAATA               CCGCG CTAT CACGG                TACCGTTGAGACGGA  53 452
        mlaF NONE
        mlaE NONE
        mlaD NONE
        mlaC NONE
        mlaB 5036318 .. 5036342 -  -7.2  -5.05712   ATAAATAAGCAAAAA         GCCTCG-CTGA TAAA TCAGACAAGGC          TCGACTTGCAGGCAG  86 85
        ibaG NONE
        murA 5034589 .. 5034601 -  -4.8  -3.52102   AGTTTATCGACAGAA                CGCA GTTGA TGCG                TAGCTACACTAAACC  56 98
        rplU NONE
        rpmA 5032246 .. 5032267 - -15.9  -4.75174   TATCGAATGTAAAAA           GCCCCGCAA CGTG TTGCGGGGC            TTTCATCCGTTACCG 100 54
        cgtA 5029988 .. 5030006 - -13.1  -4.33928   TAGCCTAAAGAGAAA             CCCCGGC ACATG GCCGGGG             TTTTGCTGATTAACG 100 35
        greA 5027755 .. 5027769 - -12.8  -4.36914   TGTTCGTTGATAAAA               GGCCGC ATA GCGGCC               TTTTTCCTTTCTTTA 100 74
        rlmE 5026545 .. 5026559 -  -2.8  -3.40899   AACCTCTTATTACAA               CTGTGT TAA AAACAG               CGTCAGGATACTCTA  46 80
        ftsH 5024525 .. 5024544 - -12.8  -5.56673   ATTGATAAGAAAAAA            CCCCGGAG CACG CCCCGGGG             TTTTCGGTACAAATA 100 61
        folP NONE
        glmM 5022273 .. 5022285 -  -9.1  -5.24129   TTCGCTGAGAAAAAA                GGCGA CGA TCGCC                GCCTTTTTAGCCAGT 100 52
        secG NONE
HHJ42_RS24285 5021624 .. 5021639 -    -9  -5.48054   ACCAAAACGAAAAAA              GACGCT TTTC AGCGTC               TTTCTGGAATTTGGT 100 37
HHJ42_RS24270 5017649 .. 5017664 - -10.4  -5.60689   TCAGATAACAAAAAA              CCCCGA TAAA TCGGGG               CTTTATATAACTGAA 100 151
        rimP 5017139 .. 5017155 -  -6.5  -2.51207   CAGACTATTAAAAGT              GGGGAAC CAG GTTCGCC              TTCTGGATATTACTC  53 1
        nusA NONE
        infB 5012778 .. 5012792 - -11.4  -5.24129   TCTCCTGACAAAAAA               GGGGCT GTT AGCCCC               TTTTTAAAATTAATT 100 152
        rbfA NONE
        truB 5011291 .. 5011317 -  -2.3  -4.06361   GTATATAGAATGAAA        GGA-CGCCGA TCTCTAAT TCAGCGATCC         CAGTGTACGTTACGC  55 118
        rpsO 5010954 .. 5010970 - -10.8  -5.03314   GTCAGCTTGAAAAAA              GGGGCC ACTCA GGCCCC              CTTTTCTGAAACTCG 100 47
         pnp 5008577 .. 5008598 - -15.1  -4.07568   CCTGCCCGGTTAAAA           GCCCCCCGC CGCA GCGGAGGGC            AAATGGCAACCTTAC 100 37
        nlpI 5007557 .. 5007582 -  -7.5  -4.04023   ATTAACGAACAACAA         CGCCCTCACCC GTTA AGGTGATGGCA          ATCAAAAAAGATTAC  72 60
        yrbN NONE
        deaD 5005482 .. 5005504 - -10.6  -5.82281   AAAGACAGAAAAAAA           GCCCCGAT GGTTAAA ATCGGGGC           TGTATATATTATTTT 100 69
         mtr 5004086 .. 5004108 -  -8.4  -2.98823   GCTGTCCTACATAGA           CCTGATAAGC GAA GCGCATCAGG           CATTGTGTAGGCAGC  66 67
HHJ42_RS24195 NONE
HHJ42_RS24190 4999678 .. 4999702 -  -2.1  -3.60151   CGCGGGAAAGGAGAA         CTAACGCTGG TGTTTT CC-GCGCCAG          TGGGCGATCGTTCGC  49 155
HHJ42_RS24180 4998995 .. 4999011 - -10.1  -2.70946   GTGGTTGATAAAGAT              CAGCTGG TTA CCAGCCG              GACACCGGACGATCT  67 63
HHJ42_RS24170 4997720 .. 4997730 -  -5.4  -2.65264   TGACCAGTCATAGCA                 TTCC CCA GGAA                 TAAGTTATGATAATT  50 83
HHJ42_RS24165 4996639 .. 4996650 -  -7.2  -3.50393   CCGTAGGTCAGATAA                GGCG TTTA CGCC                 GCATCCGACATGTTT  65 50
        agaR 4974235 .. 4974246 -  -5.8   -4.7416   GCAAAATGTTAAAAA                GAGG ACAT CCTC                 CTGCCGACTGGGAAA  81 127
        garP NONE
        garL NONE
        garR 4968284 .. 4968295 -  -7.2  -2.66316   CCTGTTACCACATGA                CGCC GGAG GGCG                 TTTCTCTTATTCGGC  57 88
        garK NONE
        rnpB 4966668 .. 4966695 -   -15  -4.07568   TCTGCCCCTCCAAAA        GCAAAAACCCGC CGAA GCGGGTTTTTAC         GTAAATCAGGTGAAA 100 33
        tdcA 4962544 .. 4962564 -  -2.5  -3.54146   CGCCTGAATTAAATA            TGTAGGTAA CCG TAACCGACA            CCTGCAAGACAGACA  48 75
        tdcB NONE
        tdcC NONE
        tdcD NONE
        tdcE NONE
HHJ42_RS23965 4956167 .. 4956201 - -11.5  -3.05384   TTGCCGTTCAGTGAA    GTGGAGCGGAACGACC TTAC GACCGTCCCGCTC-AC     GAGGCTTTACGCACT  79 32
        tdcG 4954730 .. 4954747 - -11.3  -6.00086   AGATCACAAAAAAAA             GGTGCAC ATTT GTGCACC              CAAGGATGAAAGCTG 100 50
HHJ42_RS23955 4953147 .. 4953161 -  -2.8  -4.90217   CAAACATATTAAAAA               CCTTAA AAT TTCAGG               TAAATCAAGAAAATG  70 30
HHJ42_RS23950 4951553 .. 4951581 -  -2.3  -4.61527   AAAATTGGCCAAAAA       GCGCCAGC-CGG TGAAGC CCGTGGTGGCGA        AAGAACCTGCTCGCA  66 272
        yhaJ 4949764 .. 4949783 -  -9.2  -2.62425   AATTAATCTTAGAAT            TGGGGCGA TATT TCGCCCCT             TTTTATTAACAATAA  66 47
        uxaC NONE
        uxaA 4938264 .. 4938288 - -12.9  -4.21922   GTATGGAAAAGCAAA          CGGCGCTTCAC ATT ATGAAACGCCG          TTTTTTATTAACAAC 100 52
HHJ42_RS23860 4937660 .. 4937670 -  -2.4  -3.34517   ATCGTCTGGCAAATA                 GCGC CCT GCGT                 AATTAATTGTTTAAC  45 36
        higB NONE
        higA 4930042 .. 4930057 -  -4.6  -3.76641   AGGGCAAGAGCCAAA              CCGCGC GCTG GCGCAA               CCGCTGATTGATAGC  58 184
HHJ42_RS23780 4917369 .. 4917397 - -14.7   -3.9344   AAGCGTAATATCAAA        TCGGATGGCGA TACGACG TCGCCATCCGA        TCTTTTTATACGACG 100 31
         aer 4913839 .. 4913854 -  -3.3  -5.72622   TGCACAAATAAAAAA              GATCA TTGCGG TGATC               GACCGCGCCGCTTTT 100 215
        nfeF 4912173 .. 4912194 - -14.5  -3.91597   ACCAGATATAGCAAA           GGCTGACGA GAAA TCGTCAGCC            TTTTTCTTTTTATAT 100 46
         mug 4911432 .. 4911450 - -11.7  -3.85698   GGCCCTCTGCACAAA             CGCCACC TTTTC GGTGGCG             TTTTTTATCGCCCAC  93 30
        tsaD 4905831 .. 4905841 -  -2.4  -2.85668   CATTCTTACACCATA                 CGCC ACC GGCC                 CCAGTCCGATTTACT  41 202
        ttdR 4901501 .. 4901513 -  -3.3  -3.22909   TTAAAGGAGGAAAAG                GCGTT GCT ACCGC                TTTTGGTGCCATCGC  45 324
        folB NONE
        bacA 4899693 .. 4899706 -  -8.1  -3.30124   TTGTAGGCCTGATAA               GACGC GCAA GCGTC                GCATCATGCGTTGAT  65 117
        ygiF NONE
        glnE NONE
        hldE 4891590 .. 4891609 - -11.4  -3.71649   GGCTGAAACGGGAAA            GCCCCTCC CGAA GAAGGGGC             CTTGTATAAGGAAAG  91 224
        glgS 4888206 .. 4888221 - -11.8   -4.5394   ATACAAACACTAAAA              CGGGCC ATCA GGCCCG               TTATATCAGTGCTCT 100 31
        ribB 4881580 .. 4881601 -  -5.9  -5.63236   AGGGAAAAATAAAAA           CCGAAGCCTG CTA CAA-CTTCGG           TTTCTTGATTAAGGC 100 61
HHJ42_RS23610 4881156 .. 4881188 - -13.6  -3.80746   TGGTTAAAAACAACA      TCAGAAGTTGTCCA GCGCA TGGACAACTTCTGC      CAGCTTCACGAAAGC 100 42
        ygiD 4879415 .. 4879436 - -15.9  -2.84619   GAATAAGCCACGATA           CCGGATGGC ACTC GCCATCCGG            TAATTGTTAGCCTAT 100 32
        nudF NONE
HHJ42_RS23575 NONE
        cpdA 4873830 .. 4873844 -  -2.8  -2.93769   AAAGAAGCGTAGACA               TCAGTA GCC TTCTGA               AGCGGTATCAGGTTG  42 11
        yqiA 4873256 .. 4873267 -  -4.4  -2.88544   GTTGATCGTCAGAGA                TGGT GCAG ACCA                 AGAAAATCGACGATC  48 7
        parE 4870818 .. 4870829 -  -2.2  -4.13995   GTTCCATAAAGCAAA                CCAA TTCC TCGG                 TATGGAACCGCTGCC  56 524
HHJ42_RS23545 4869539 .. 4869554 -  -6.8  -3.87815   GCCCACCCGGACAAA              CCGCTA CCGG CAGCGG               GCTTGGGCTATCGAT  68 174
        ygiW 4867076 .. 4867098 -  -9.1  -2.90496   CTCCCTGCGAAATTA           TTCCCGGGA ACGCG TCCCGGGAG           CGGTAACAATTACGG  67 35
HHJ42_RS23525 4866513 .. 4866533 -  -3.9  -4.41114   TGACCATATAAGAAA            GTGGCGC ATTAGTA GCGCCAG            TTTGAAGCAGGAATT  64 65
        mqsR NONE
        mqsA 4865649 .. 4865663 -  -4.9  -5.63517   CCGGTAAAGAAAAAA               GCGAG TTGCC CCCGC               TTTTCCATTAATTAA 100 37
HHJ42_RS23510 4863900 .. 4863926 - -11.5   -3.0497   AGATCAGCGTGAATA         GCGCCGCCGGA CGTGC TCCGACGGCGA         TAAAGGCATCAATGT  79 34
        parC 4861391 .. 4861406 -  -2.6  -4.07568   CCGCTCTCTGGAAAA              GCGTATT GTT AAT-CGC              AACGCATGAATAAAC  56 158
        plsC 4860525 .. 4860551 -  -2.2  -3.33151   CTGGCTAAAGTAATA         CCGTGCAGGAAA GTG TTCCCCGCAAAA         ATACAGATTGCCGAC  45 41
        ftsP 4859039 .. 4859072 -   -14  -2.52015   TGCATACTGAGTAAT     TTTCAATGCCCCAC CACTCT GTGGGGCATTGAAT      TGGTCCATTACGGTA  86 33
HHJ42_RS23455 4849032 .. 4849058 -   -13  -5.73339   AGAATGATAAAAAAA         TCCCCGGCAGCA TTC TGTTACCGGGGA         TATTTTTTAACGTCC 100 32
        yqhC 4844259 .. 4844278 -  -2.1  -3.23929   TAAACGACATGAAGA            TCAGGTA ATGACG TTCCTGA             TGATCCTGCCAATTG  43 148
        exbB NONE
        exbD 4840924 .. 4840950 - -13.8  -5.44119   TTTAGGTTAAAAAAA         TGCCCGGTTG TGAAAAG CAACCGGGCA         TCATTTTTATTTCGC 100 32
HHJ42_RS23400 4839321 .. 4839341 - -16.1  -3.62775   ATGACCTGTTAATAA            CGGGCGCGA GAA CCGCGCCCG            AATCAGATCAGTGAT 100 33
HHJ42_RS23390 NONE
HHJ42_RS23385 4836665 .. 4836683 -  -3.2  -2.88427   AAGACCTGGCATATA             TTTTGC CTCAATC GCAAAA             TCAATAATGCGATCG  44 161
        hybO 4835468 .. 4835483 -  -2.4  -3.14132   CGCGCCCGTCAGCAA              TGCCCC GCAG GAGGCT               GCTTTAATAAAATTA  44 54
        hybB NONE
        hybC NONE
HHJ42_RS23360 NONE
        hybE NONE
        hypA NONE
        hybG 4829694 .. 4829711 -  -5.5  -3.09516   CGCTTTACCATGGAA             GCCAAGC GCCT GCTCGAC              GTGCTGGATAAGCAA  50 398
         gss 4827033 .. 4827069 - -16.8  -3.14881   GAATGTTTTGATTAA    TCCCCGTACTGATTAT TCTTC ATAATCAGTACGGGGT    TGCTACAACATGTAT 100 40
        pitB 4825252 .. 4825286 - -13.7  -4.68994   ATCACTAGTCAAAAA     TGGAAATGCCCGATC GCCAG GACCGGGCATTTTCA     GGAAGGTTAAATCAA 100 32
HHJ42_RS23320 4823673 .. 4823690 -  -4.1  -3.78775   TTGGTGATCAGGAAA             GCGCA GCTTGAAT TGCGC              GTAGTGACGCTTGCA  55 0
HHJ42_RS23315 NONE
HHJ42_RS23310 NONE
HHJ42_RS23305 NONE
HHJ42_RS23300 NONE
        lptF 4818955 .. 4818973 -  -2.5  -2.67667   TGACGGATTAAATAG            CGACTGAA AACA TTCA-TCG             GGAAAATTTCTGCAG  40 20
        lptG 4817794 .. 4817808 -  -2.1  -3.59979   GCGCTGTAGCGTAAA              CG-CTG CCCA CAGTCG               TGAGCAAATCGATGC  49 109
HHJ42_RS23265 4812244 .. 4812257 -  -3.8  -3.25823   GCCGCTGGAGATGAA               GCAG GGGTGA CTGC                CATCAAATCTGCTTT  48 28
        glcD NONE
        glcE NONE
        glcF NONE
HHJ42_RS23240 4806911 .. 4806927 -  -4.3   -3.1582   CGATCTCATCAAAAT              TGCGCCA GAA CGCCGCA              GCGTCCAACCCTGTT  50 142
        glcA 4802776 .. 4802802 - -12.4  -3.57507   AGTAATGTAAACGAA         GCCGGATGAT ATTAACG ATCATCCGGC         TTTATTGACTTACGA  95 35
        sslE NONE
        pppA 4796806 .. 4796822 -    -3  -3.18144   AATAAGAGTTAAAAT              GTCACT TTGAT AATGAC              GTGGTTATCATTAAA  45 36
       gspS2 NONE
        gspC 4795375 .. 4795387 -  -4.8  -3.72576   TTCTCCTGGATTAAA                TGCG GTTAG CGCA                GCGCGATGGAAATGT  59 18
        gspD NONE
        gspE NONE
        gspF NONE
        gspG 4789850 .. 4789866 - -12.3  -3.85817   ACCGGGTCGCAGAAA              CGGGCAA CCA TTGCCCG              TGACGACGCTGCATA 100 261
        gspI NONE
        gspJ 4788576 .. 4788586 -  -2.4  -2.66216   GGTGATCATGATAAT                 TGCG GCC CGCG                 TAACAACCAGATGCG  39 5
        gspK NONE
        gspL NONE
        yghD 4785796 .. 4785809 -  -2.4  -3.70902   CTTGCTACATCGAAA               CTCA GCCCGG TGAG                CGGGTTTGACAGTTC  49 95
HHJ42_RS23155 NONE
HHJ42_RS23150 NONE
HHJ42_RS23145 4782669 .. 4782683 -  -4.2  -3.25073   CTTGCAATATCAACA               CTACCA TTA TGGTTG               CAACCAATTTCAGCA  48 57
        neuC 4778816 .. 4778836 -  -2.5   -4.7254   ATGGTGGACCAAAAA            GAATTCCAT TAA AAGGAACCC            CTATTATTTTACAAA  65 441
HHJ42_RS23125 4778049 .. 4778061 -  -5.5  -5.32944   TTTAGAATTAAAAAA                CCATG AGT CACGG                AAAAACCCAATTGGA  87 148
         iha 4764033 .. 4764073 - -11.1  -3.19371   ATGCACTTAACCTAA  TACGTTGCCACTGTTCCGC CAG GAGTTGCAGTGGCAACGTA  TTCTACCGTCAGTGA  78 57
HHJ42_RS23055 4761569 .. 4761579 -  -2.4  -2.69151   CCCCCTGATACACCA                 TGCC GTT GGCG                 TTTCGTAGAGGCTGA  39 186
HHJ42_RS23050 NONE
HHJ42_RS23045 4760398 .. 4760418 -  -5.4  -3.34344   TCATTCCTTAAGTAA            GCGTACAC TGGCC GCGTACAC            CATGGCATAATGATA  56 469
HHJ42_RS23005 4751569 .. 4751594 -  -8.4  -3.55563   AGGGTATGCTGTAAA         CAACATGGTCC TTGGT GG-CCATGTTG         TTTACAGCCAGTATA  71 516
HHJ42_RS22975 4741880 .. 4741890 -  -2.4  -3.98859   TTGAACCGAAAAACA                 CGGC GGT GCGG                 AGTCCGGAGAGTAAC  54 369
HHJ42_RS22940 4736902 .. 4736916 -  -5.6  -3.01712   TCTGGCTGGCTAACA               CCCCAT TAT AAGGGG               TACGAATAAAGTAAC  52 16
HHJ42_RS22910 4731542 .. 4731555 -  -2.3  -2.94747   CGACTTCAGTATACA               GGATG ACCG CAACC                ACGCTCCTTCTCCTG  41 234
HHJ42_RS22890 4726108 .. 4726119 -  -4.4  -3.77808   GGCATGACAACAGAA                CAGA TACA TCTG                 GCGCTGACTGAAGAG  58 217
        dnaB 4724250 .. 4724260 -  -3.2  -3.80746   CCCTTAAAAATAATA                 TCCC TGA GGAA                 AATCACTGAACCGGG  53 3
HHJ42_RS22875 4722543 .. 4722559 -  -7.2  -3.32202   CAGGGGCAGATAACA              CGCCAG CGCCT CCGGCG              ATAAGGCGGTGCTTT  63 40
HHJ42_RS22870 NONE
HHJ42_RS22865 4721082 .. 4721093 -    -3  -3.34281   CCACACAAAAATAAT                TTCA TGCC TGAA                 TACACTTATAGCTGC  46 117
HHJ42_RS22860 4719687 .. 4719739 - -11.5  -2.62667   CCAATTTTTAAACAC TGTTTCCAGTGGAAACACCGGTTAA GTT TTGAGCACTGTTTCCAGTGGAAACA CGGGTGATTTATTGA  77 49
HHJ42_RS22850 4717999 .. 4718010 -    -3  -4.23794   TTAACCCAATATAAA                TAAC ATTC GTTA                 TTTTTTTAAAGACGG  58 23
HHJ42_RS22845 4717406 .. 4717416 -  -2.6  -4.03234   CTTTTCGCACAGAAA                 TAAT TTC ATTA                 CCCTGTTCTACCTCC  56 33
HHJ42_RS22840 4715130 .. 4715150 -  -7.6  -5.63517   TTGTCAAATAAAAAA            GGCGTTAC GGTTA ATAACGCC            TGACAGTGCCGCCCA 100 235
HHJ42_RS22830 NONE
HHJ42_RS22825 4713022 .. 4713041 - -13.6  -5.24129   GGCGGGCATAAAAAA            TGCCGGCA GTCA TGCCGGCA             TTTGAGAGTAAAAAC 100 49
HHJ42_RS22805 4710249 .. 4710261 -  -4.9  -4.77036   GGCCATCATGAAAAA                GAAAA GTT TTTTC                ATGGAAACTCCGAAC  75 102
HHJ42_RS22800 4708890 .. 4708902 -  -5.5   -3.1372   GAGTCTGGAGCAACA                CTGGC ATC ACCAG                TATCAATCCAGGACT  54 279
HHJ42_RS22795 4708236 .. 4708260 -  -7.9  -2.84999   ATCAAATTCAGCATA          TTCCATAGCCA CTG TGTCCATGGAA          AAAACTCCCAGTGAA  61 105
HHJ42_RS22790 NONE
HHJ42_RS22785 4707773 .. 4707806 -  -4.5  -3.52919   ACCAGTCAACTACAA     GAGCCAGATGACGGGA TAC TGCCA-CGTCCGGCTC     CGTGGGAGTGGAGGG  54 115
HHJ42_RS22765 4702064 .. 4702084 -  -9.7   -5.9873   TGATTATAAAAAAAA            GAGGCACCC ATA GAGTACCTC            ACTTACTTTATATCT 100 58
HHJ42_RS22685 4670207 .. 4670217 -  -2.6  -4.31164   TGCAGAGAATATAAA                 TTAT TCT ATAA                 AGCTCTTTTCCTACT  60 293
HHJ42_RS22675 NONE
HHJ42_RS22670 NONE
HHJ42_RS22665 NONE
HHJ42_RS22660 NONE
HHJ42_RS22655 4666105 .. 4666137 -  -9.9  -4.59511   AACAGTGTTCAAAAA      TCATCCAGCGTTTCC ACT GGAAACACTGTTTGA      AAATTCACCGACACG  91 264
        traD NONE
HHJ42_RS22645 4663098 .. 4663124 -  -8.1  -2.87132   TTGTCTGCTGACAGA         GACACACAAAA ACAAG TGTTGTGTGTC         TCTGCCCAGCGCCTA  61 38
HHJ42_RS22635 NONE
HHJ42_RS22630 4661736 .. 4661750 -  -2.8  -3.16556   AAACAGCACACTCAA               CTGG CAAACAT CCAG               ATGCAGACCACCAGT  45 7
HHJ42_RS22625 4661296 .. 4661312 -  -2.2  -4.37886   CGATCCGGCATAAAA              TCGATG GTCTG CATCGT              TGCCTCCGCTTAAAA  59 35
HHJ42_RS22620 NONE
HHJ42_RS22615 NONE
HHJ42_RS22610 NONE
HHJ42_RS22605 NONE
HHJ42_RS22600 NONE
HHJ42_RS22595 4656839 .. 4656855 -  -9.4  -3.55444   GGCTGACGGCCTAAA              CCGGCA TTCTC TGCCGG              TGTACTGCGGTGTAC  75 124
        taaP 4651720 .. 4651759 - -12.2  -4.84311   GGTGAGAGAAGAAAA  GCGCATCAAAACCCGCCGG TGA CCGGCGGGTTTTCAC-CGG  TTACCAGCCCACCGC 100 26
HHJ42_RS22580 NONE
HHJ42_RS22575 NONE
HHJ42_RS22570 NONE
HHJ42_RS22565 NONE
HHJ42_RS22560 4646920 .. 4646950 - -13.4  -2.77999   TATTGACGAAGATTA       GCCAGCCACAAAAC TAA ATTTTGCAGCTGGC       TTCAAAATATTATTA  85 38
HHJ42_RS22545 4645516 .. 4645536 -  -6.9  -5.38054   CCCGATAAAGAAAAA            GGAGAATAT TTT ACATCCTCC            TTTTTCTCTTTATTA  91 121
HHJ42_RS22540 NONE
HHJ42_RS22535 4642733 .. 4642766 -  -5.9  -5.00616   TTTCTCCTGAAAAAA     CGGAGAAATTCCCTG ATGA CGGGTGATTTCCCCG      TCAGCGGGCAGGTTA  78 321
HHJ42_RS22530 4642289 .. 4642318 - -10.7  -3.49475   GCTATCCTCAGATAA       GGGAATACAGCCC TCAC GGGATGTTTTCCC        GTATGGGTCATAAAA  81 58
HHJ42_RS22525 4641782 .. 4641800 -  -2.5  -3.92522   GGGTAATGCCATAAA            TCATGGTT ATCA AACC-TGA             TCAGTAAATGGAAGC  54 177
HHJ42_RS22520 4641289 .. 4641326 - -12.2  -5.75342   CTCCGGTAAAAAAAA  GACGGAGAAACGTCCACC TGAC GG-GGA-GTTTCCCCGTC   GGGTAGGTAAGTAAA 100 62
HHJ42_RS22515 4640828 .. 4640863 - -11.2  -5.52384   TTCTGATTAAAAAAA    TGGCGGATTCATCTCC TGAC GGAAATCAATCCGCCG     GGCGGGGTCATAACA 100 71
HHJ42_RS22510 NONE
HHJ42_RS22505 4639508 .. 4639538 -  -6.9  -5.45652   ACCCTCAATAAAAAA      GGTGTATCCCGTCC TGAC GGT-GAGATACACC       ATCAGGTGAAAAAAC  91 126
HHJ42_RS22500 NONE
HHJ42_RS22495 4638147 .. 4638176 - -15.1  -5.55769   TTTCAGAATAAAAAA       GAGGGCTTATCCC GTGA GGAACAAGCCCTC        ACGGGAAAGATGTCA 100 52
HHJ42_RS22490 4637069 .. 4637086 - -11.3  -6.32976   AAAAAAATAAAAAAA             CCCGGTA TCAC TACCGGG              TTTTCAGTCAGTTAA 100 56
HHJ42_RS22485 4636463 .. 4636482 -    -5  -2.97667   CGATTTACGAAACCA            CGGTAACA TCGG TGTTACTG             CCTCTTTAATTCGGT  50 190
HHJ42_RS22480 NONE
HHJ42_RS22475 4633700 .. 4633720 -  -8.3  -3.40867   TGATTTATCAAGTAA            GGGTGTTTT CCT AGAACACCC            TTCTCAATCAAATCC  69 98
        speC 4630110 .. 4630131 - -11.5  -5.30616   TTACGCAAAGAAAAA           CGGGTCGCC AGAA GGTGACCCG            TTTTTTTATTCTTAC 100 37
        trmB NONE
HHJ42_RS22430 4624768 .. 4624791 -  -8.8  -4.44667   TCCCTCAAGAACAAA          TCAGGCCAGC ATTT GCTGGCCCCA           GATTGATAACAAAGT  87 165
HHJ42_RS22425 4623990 .. 4624012 -  -9.2  -4.12315   AAACGAAGAATTAAA           CGGCATAAAA AAG TATTATGCCG           TCTTAAAATAGAGGA  80 41
        ansB 4622778 .. 4622798 - -14.7  -3.73068   GTCTGAAGTGAATAA            GCCCCGGCA CGA TACCGGGGC            GAAGTGATTAGTACT 100 33
HHJ42_RS22415 4621620 .. 4621661 -  -9.6  -2.83403   TCTGGCTGAGTAAAT TTGTATTGCCGGATGCGGCG TGTA CGCAACATCCGGC--TACAA CTCTTGCGTCATCGC  69 46
HHJ42_RS22385 4617079 .. 4617094 -  -5.4  -4.63218   GGGCGCTCAACAAAA              GCAAAG TCGA CTCTGC               CTCTGCGGTTATTAT  75 245
        yqgB NONE
        speA 4607096 .. 4607127 -   -16  -5.02777   ATATATAAAAAGAAA      GCGGGCCGATTTAC GTAA ATAAATCGACCCGC       CAGCGGAATAATCTT 100 43
HHJ42_RS22325 4606168 .. 4606200 - -12.7  -5.71712   GTCGATATAAAAAAA      CCCCTCCGCGTCG TTAGGCC CGACGAGGAAGGG      TTGGATTTGCGAAAC 100 93
        speB 4605143 .. 4605174 - -10.8  -2.52896   GTAGTGCCGAACGTA      GGTCGGATAAGGCG TTCA CGCCGCATCCGACA       TTAATGACACATCAC  74 63
         tkt 4601880 .. 4601897 - -14.1  -5.65513   TACTAAGTAAAAAAA             GGGCCGC TTTC GCGGCCC              TTGAGACTGATAGCA 100 222
        cmtB 4600147 .. 4600163 -  -3.7  -3.34534   TAGAGGAGAGAGTAA              TTATCCG CGG CTGATAA              TGTCCGCTAATTGTT  50 9
        cmtA NONE
HHJ42_RS22290 4597422 .. 4597432 -  -6.8  -3.96618   CGTAACGCGAAATAA                 TGGC CAC GCCA                 GGGACATCATTGCGC  68 32
        fumE NONE
HHJ42_RS22275 4595452 .. 4595465 -  -5.2   -4.7657   GAAAAACCTGAAAAA               CCGC CAGCGC GCGG                CAAAGATTGGCGTAC  78 446
         epd NONE
         pgk 4590206 .. 4590223 - -12.7  -3.90922   AGCGCGCTGAAACAA             GGGCAGG TTTC CCTGCCC              TGTGATTTTTTACTT 100 35
        fbaA 4588898 .. 4588914 - -11.5  -5.40072   TTTTGGCGAAAAAAA              GACCCGC AGA GCGGGCC              TTGAGATAAGCAGAA 100 50
        mscS 4587854 .. 4587879 - -11.9  -3.33839   AAAACTAATAAGAGA         GAGGCCAGAGA GTAT TATCTGGCCTC          AGCGTTGATTACGCA  85 34
        argO NONE
HHJ42_RS22220 4586251 .. 4586274 - -16.8  -2.54504   ATCGGGTAAAGACAT          TAGCCCGACG AATA CGTCGGGCTA           CAAGTATTAATGTGC 100 32
HHJ42_RS22215 4585149 .. 4585165 -  -2.9  -4.11216   TCGCTATCTGGAAAA              TGCGTCC GGC GGACATA              TTCACCACGATCTTA  56 93
HHJ42_RS22200 NONE
        rpiA 4581809 .. 4581827 -  -3.2  -5.27399   CAACATATCAAAAAA             TAATATTG CGG CAATATGA             ACGTTTGCGTCGCGA  77 196
        serA 4580466 .. 4580488 - -15.6  -5.66684   GAAGGGATAAAAAAA           CGGGCAAGTC AGT GACCTGCCCG           TTAATTTTCAGAGAA 100 47
        ibsC 4580052 .. 4580063 -  -5.8   -4.9218   CAGTTAGTAGAAAAA                CTCC CAGT GGAG                 AAATGGGATATTCCA  83 169
        ygfB NONE
        pepP NONE
        ubiH 4575666 .. 4575678 -  -3.3  -3.05597   TTTATTCCTTAAAAC                CGCCT TCA ACGCG                CCACCCAACCAAGAG  45 18
        ubiI 4574379 .. 4574402 - -10.3  -4.39386   TTCAAATGAGGAAAA          TCTCCCGGC GAAAAA ACCGGGAGA           TGAAAGTGTGATGGG  87 69
        gcvT 4572907 .. 4572927 -  -8.9  -3.16667   CAAAAAAGTAAATCA            CGCGACGGC TTT GCCGTTACG            CACAAAAACAGGTTT  70 2
        gcvH 4572428 .. 4572464 -  -4.4  -3.01712   CTCTCCTTGCGAAGA    GAGTGAGGGTGAGG CGTAAATTT CCTCACCCTGATCC    TCTCCCGCAGAAGAG  49 52
        gcvP 4569461 .. 4569474 -  -9.5   -4.8143   TTAACAAGCGAAAAA               GGCGC CGAA GCGCC                TTTATAAGATAGTCG  91 51
HHJ42_RS22120 4567440 .. 4567451 -  -4.4    -3.281   GCGTAACTGAGAATA                GTTC CAGT GAAC                 ACCTGTTAGCTAAAA  52 119
HHJ42_RS22115 4566648 .. 4566689 - -12.4  -2.95073   GCTGGAAGAGTAAAT CTCTGTATCGCATCAGGCA TTTAT CGCCTGATGCGACACTG-G TGTGTCTTTTCAGGC  82 58
        sdhE NONE
HHJ42_RS22100 4564389 .. 4564401 -  -4.8  -2.72144   GGATTTTGGCGAAAT                CCAG GAAGA CTGG                GAAGCCGTCTGGGAT  46 392
        xerD 4563199 .. 4563214 -    -4  -2.87132   TGTTCTTTTCAGACA              TCACGCC CGC GG-GTGA              TGCTGTTGATGAAGT  46 10
        dsbC NONE
        recJ 4560677 .. 4560703 - -11.7  -3.30903   AAAATGCGGTGATAA        GAGCG-GGATTG TACC CAATCCACGCTC         TTTTTTATAGAGAAG  85 47
        prfB NONE
        lysS 4557971 .. 4557988 - -10.5  -5.33848   ATCACAATTAAAAAA             CCCCGAC ATTT GCCGGGG              TTGTGAGCATAACGT 100 46
HHJ42_RS22060 4556968 .. 4556999 -  -2.2  -2.52464   TTCTTTTCTAAGTTA      CCGGCCGTACTGCAA CCG TTGCTGCATAGC-GG      CATTATGCTCGCAAC  38 315
        ygfT NONE
HHJ42_RS22040 4552461 .. 4552477 - -11.5  -2.77182   GTTTATATCGAATCA              GCGGCAG GAA CCGCCGC              CGGGGGGAAAACCGG  73 425
        yqeC 4538620 .. 4538634 -  -9.2  -3.14683   ATATCCTTTCAGTAA               CCCGGA ATA CCCGGG               CCGCTAATTCACAAA  70 29
HHJ42_RS21990 4536931 .. 4536956 - -16.2  -3.78329   TGTCAGTAATTTAAA         GGCCGGATGG GTAATA CCATCCGGCC          ATTTTCATTTAAGCC 100 34
HHJ42_RS21960 4528503 .. 4528531 -   -14  -3.31541   AAAACGAAGTAAAAG       GATATCCGGCCTG AATT CAGGCCGGAT-TC        TCAGAGGTTATGTGT 100 33
HHJ42_RS21940 NONE
HHJ42_RS21935 4523345 .. 4523366 -  -7.5  -3.04515   AAAGAGTTCTGAACA           TCTTAAATA AGAC TATTTAAGA            TACATGACGATTGCA  60 174
HHJ42_RS21925 4520440 .. 4520453 -  -6.7  -4.78752   ATGAGAATGGAAAAA               TCAGG GAGC CCTGA                AAAGGTATGTCGACT  80 107
        kduI NONE
        kduD 4518581 .. 4518598 - -12.7   -5.4492   TACAGATATAAAAAA             CCCTGCC ATGC GGCAGGG              TCATAAAAGTAAGAG 100 48
        araE 4516855 .. 4516881 - -18.8  -5.30155   CTATTAACGAAAAAA         GGGCCGGATGTA CAG CACATCCGGCCC         GTGAAATCAGACGCC 100 32
        ygeA 4515816 .. 4515844 -  -3.7  -2.93869   CATGATCGTAGAAAC        CCACAGCGCCG CGTCAGT CTGCGCAATGG        TACGGGCGGGGGTAG  45 248
        lysA 4513747 .. 4513758 -  -3.6  -2.76263   GTCATCATGCAACCA                GCGA CTAA CCGC                 AGTTAAAGCAATTCC  43 28
         aas NONE
        lplT 4508763 .. 4508788 - -16.3  -3.27475   TCCTGCACCATAAGA         TTAACGCCGGT TAAA ACCGGCGTTAA          ATATTAATGACGGCG 100 29
        rppH NONE
        ptsP 4502211 .. 4502221 -  -6.8  -3.68506   GAACAGCGATTGAAA                 TGCG CGC CGCA                 GGTTTCAGGCGCTCC  64 115
         lgt NONE
        thyA 4500443 .. 4500462 - -10.7  -5.78622   GGAGGGCAAAAAAAA            CCGACGC ACACTG GCGTCGG             CTCTGGCAGGATGTT 100 47
HHJ42_RS21835 NONE
HHJ42_RS21830 NONE
HHJ42_RS21825 NONE
HHJ42_RS21820 NONE
        recC 4495117 .. 4495135 -  -7.4  -2.69471   CTATGTCTATATAAC             CATCAGTC CGT GACTGGTG             CGCATCATAAAGTAA  58 72
        ptrA NONE
        recB NONE
        recD 4486706 .. 4486750 -  -8.5  -4.30978   GGTAAGCGATGAAAA TCGTCGGATGCGACATGCG TAACACT CGTGCGTCGCATCCGGCAA TTACGTTTATTCCCG  84 32
        amiC 4483642 .. 4483687 - -13.5  -6.06723   GGCTCCAAAAAAAAA GGCAAGGC-ACGTCAGAAGTAA TAA CTACTTCAAACATTGCCTTGCC TGATTTAACAGTTAC 100 217
HHJ42_RS21785 NONE
HHJ42_RS21780 NONE
HHJ42_RS21775 NONE
HHJ42_RS21770 4479362 .. 4479381 -  -7.8  -3.94188   ACTCACTTCAAAGAA            CGCCACCC CAAA AGATGGCG             TGACCGGTTACTGTA  72 55
HHJ42_RS21765 4478334 .. 4478358 - -11.5  -3.90328   TAGAATGCTGACAAA          CCGCAATGTGT TCT ACAAATTGCGG          TTTTTTTGTATTTAA  91 59
        mltA 4443995 .. 4444015 - -12.6  -4.93365   CCTCAGAATTAAAAA            GGGTGAGG TTACC CCTCACCC            TGTCATATCCGTAAA 100 62
        tcdA 4443127 .. 4443164 - -17.1  -3.59946   GGTTTAAGCACAGAA   CCAGGTCGGATAAGACG TTCG CGTCGCATCCGACCTGA    TTGTTTACCCCTGAC 100 30
HHJ42_RS21610 4441007 .. 4441026 - -10.7  -2.57423   ATAGTGATTAATGTA            GCACCGC CTAATT GCGGTGC             TTTTTTTTACCTTGC  74 50
        gcvA NONE
HHJ42_RS21600 NONE
        rlmM 4438240 .. 4438273 -  -6.1  -2.78996   CAGCCTGACGGAAAG    GGTAGCAGGCCGGAG ACGACG CCCCGGCCT--TACC     TGTTATCGCTCGTCG  53 28
        fucA NONE
        fucO 4429957 .. 4429975 -  -6.6  -3.30124   TTGTAGGCCGGATAA             GACGCGCC AGC GCCGCATC             CGGCATTATCACATC  61 48
         syd 4422538 .. 4422550 -  -7.7  -3.53091   AGCCTTTCCCTGAAA                CACCA TCC TGGTG                TGTCCTTCAGAAGTG  67 294
HHJ42_RS21525 NONE
        truC NONE
HHJ42_RS21515 4420337 .. 4420355 -  -4.4  -4.93898   ATAGCAGTATAAAAA             GCGCGCCA TAG CGGCTCAC             CGTGCAACAACACAA  75 289
        gudP NONE
HHJ42_RS21505 NONE
        gudD 4416095 .. 4416114 - -11.4  -3.58343   GGCATCAGTCTCAAA            CCGGCTCC AGAT AGAGCCGG             TTTTGGTTTTCTGTC  87 41
        rlmD 4411761 .. 4411778 -  -5.5  -2.80816   CCTTTAGGGACCAGA             CCTGCCG AAAT CGGCAAA              TCGTAACTATTTAAC  50 32
        relA 4409473 .. 4409485 -  -6.3  -3.34534   TACAGTATATATCAA                TCTAC ATT GTAGA                TACGAACAAGTTTCG  59 43
        mazE NONE
        mazF 4408809 .. 4408820 -  -2.2  -3.57144   TCCGTCAGGTGGAAA                CCTG TGAC CAGA                 ATAGAAGTGAGTTAG  49 47
        mazG 4407891 .. 4407906 -    -4  -4.43844   TCAGGAGTGAGAAAA              TAGCCCC TTT GGGG-TA              AATGTTTTTGACGCA  64 98
        pyrG 4406071 .. 4406095 - -18.7  -4.07562   GAAACTCCAGACAAA          CAACGCGTACC CAG GGTACGCGTTG          CCGTTCTAACTTTTT 100 44
         eno 4404684 .. 4404703 - -13.6  -5.37345   CTCAACCATAAAAAA            TGCCAGCC CGAA GGCTGGCA             TTTTTAAATCAGATA 100 50
        queE 4399788 .. 4399802 -   -10   -3.5361   GAAGGATTTACACAA               GGCTTG CAG CAAGCC               GGAGTAACGCTACAA  74 482
HHJ42_RS21395 4389647 .. 4389658 -    -3  -3.16039   AACCACCGTTATGAA                TTAG CGCA CTAA                 ATAACCGCCATCAAC  45 14
HHJ42_RS21390 4388086 .. 4388115 - -11.4  -4.21936   CTGAGAAGCCGAAAA       GGCAACGCCCCG TCATCG CGGAACGCTGCC        TGACACATTATTTTT  93 33
HHJ42_RS21385 4386705 .. 4386716 -    -3  -3.12668   CTTTAAACGCTAACA                GAAT GTTC ATTC                 GCACCTCCTACATTT  43 1
HHJ42_RS21380 NONE
HHJ42_RS21375 4384800 .. 4384825 -  -3.9  -4.42386   GGGTGACGGAGAAAA         TCCGCCAAC CGCTGATT GCTGGCGGG          CTGGTGTGCGATGAA  65 278
        cysJ NONE
        cysI NONE
        cysH 4377692 .. 4377717 -  -9.7  -5.45802   CTCGCAAAATAAAAA         CGCCCCCATCA TTTC TGACAGAGGCG          TTTAATTTATCCGGC 100 46
HHJ42_RS21335 4377290 .. 4377320 -  -9.6  -2.69473   CCAAACCATCACAAT       TCAGTACGCGGGGT TTT ACCCCGCGTGGTGG       CTACTTCTTCGATTC  69 26
        cysD NONE
        cysN NONE
        cysC 4372940 .. 4372957 -  -6.2  -3.15544   TGTTACTTTGACGAA             CCGGGC ATGGAA ACCCGG              CGGTGTCTCAGGATC  57 33
HHJ42_RS21310 4372480 .. 4372506 -  -6.6  -2.59191   GGATACCGCGACAAC         GTGGGCAAATGT ACC ACATTTGTCCAT         TGTTACGTATACCCA  55 111
        ftsB NONE
        ispD NONE
        ispF NONE
        truD NONE
        surE NONE
         pcm 4368350 .. 4368364 -  -2.8  -5.06816   ATCCCCCAAGAAAAA               TTGGTT AAT AACCAG               TGACATAATTACCGT  73 133
        nlpD 4367133 .. 4367145 -  -3.3  -3.35996   TATTCTGACTCATAA                GGTGG CTC CTACC                CGTGATCCCTTGACG  48 73
        rpoS 4366097 .. 4366118 - -12.3  -6.11229   ACCAAAAGAAAAAAA           GCCAGCCTC GCTT GAGACTGGC            CTTTCTGACAGATGC 100 45
HHJ42_RS21260 4364061 .. 4364093 - -11.5  -3.06969   TAATGTATGCCAATA      TTAACCTCGGTAA TATCTCG CTACCGAGGTTAA      TTTTCACTTTGCAAT  79 73
HHJ42_RS21230 4357945 .. 4357979 -  -2.2  -4.77775   ATTTTATAAAATAAA    GTAGTCTCATGCTTC TTCTGT GAAGCATGAGTA-AC     CCGGCGTTATTGCAG  66 45
HHJ42_RS21215 4353708 .. 4353727 -  -4.2  -3.72695   ATTGCCCTGATTAAA            GCC-CCGTG GGT CACGCTGGC            AACGGAAGACTGTGG  56 293
        hycA 4347005 .. 4347019 - -11.4  -3.57263   ACGCCCATCCCCAAA               CAGGCG TAA CGCCTG               CAAAACGGGCAAAGC  87 47
        hycB NONE
        hycC NONE
        hycD 4343559 .. 4343577 -  -3.7  -2.71263   AACTCTCTTTAATCA             CGCCGCC AGCAA GGAGACG             AACGCTAAAAATGCA  45 4
        hycE NONE
        hycF NONE
        hycG NONE
        hycH NONE
        hycI NONE
HHJ42_RS21130 NONE
HHJ42_RS21125 4338297 .. 4338321 - -12.1  -2.57344   TATCCGGCCTACAAG          GCCCGATAAGC GTT GCGCATCGGGC          AATCTTGGGTTTGGC  79 53
        ascG 4334048 .. 4334078 -  -7.7  -4.77157   GTAATGCAGGAAAAA      CGATGTCATCGACA CTAG TGACGATGACAT-G       TGATGACAATGTTTA  86 38
        hydN 4333286 .. 4333344 -  -6.7  -3.21099   TCCCGCCATCATGAA TTGCGTAACCCGC-CCTGCCGGACACGAC AGC GTCGCATCCGGCAGTCACAGGTCG-GCGA TACCGCCCGCTCCGT  59 96
        hypF 4330904 .. 4330935 -   -13  -3.04715   TACTGTGCCTAAAAT      GTCGGATGCGACGC TGGC GCGTCTTATCCGAC       CTACGGGGACGCATG  86 100
        norR 4326244 .. 4326261 -  -5.5  -4.15044   CGCTTGCTGAATAAA             GTGCATC ATCT GATGCGC              CGTGACGATGCCATC  67 376
        mltB 4320284 .. 4320328 - -10.8  -5.28778   AGGATTCAGAAAAAA GCTGATTAGCCAGAGGGAAGC TCAC GCCCCCCTCTGGCAAAT-AGT TACTGCACGCGCGCC 100 25
        pncC 4319666 .. 4319685 -    -8  -2.84098   CTGTTGAAGCAATTA            TACTGTAT GCTC ATACAGTA             TCAAGTGTTTTGTAG  61 26
        recA 4318501 .. 4318530 -  -8.5   -5.1925   TTACAACTTAAAAAA       GCAAAAGGGCCGC AGAT GCGACCCTTGTGT        ATCAAACAAGACGAT  95 40
        recX 4317877 .. 4317922 -    -7  -3.56675   CAAGCTAACGAAATA TC-GCTACCAGCCGTTGCGTGTC GTT AAC-CGCC-CGGCTGGTAACTGA AAAGTGGGAATAAGA  62 79
        alaS NONE
        csrA NONE
HHJ42_RS21015 NONE
HHJ42_RS21010 4314307 .. 4314317 -  -5.4  -3.27029   TCGTATCAAGTAAGA                 GATG GTG CATC                 CGGGAGGATTCGAAC  54 17
HHJ42_RS21005 4314166 .. 4314176 -  -5.4  -3.28487   CCATATCAAGTAAGA                 GATG GTG CATC                 CGGGAGGATTCGAAC  56 17
HHJ42_RS21000 4314026 .. 4314036 -  -5.4  -3.28487   CCATATCAAGTAAGA                 GATG GTG CATC                 CGGGAGGATTCGAAC  56 17
HHJ42_RS20995 4313630 .. 4313652 -  -3.4  -4.98255   TCGCAAGTAGAAAAA           TATGACGCTA CTT TAGCGTAATT           GCTTGATTTTGTCGC  72 261
        yqaB 4313033 .. 4313052 -  -3.6    -3.543   CGAGAAAAGCGATAA            CGCTTCACT CAC AGC-AAGCG            AACATCCACGGCGTC  50 14
HHJ42_RS20985 4312601 .. 4312629 -  -2.4  -2.79831   GTAATGGTGACCATA       TGTGCAGGC-CTA CAAT TAGTGCCACCACA        TCATGCCCTGAACGG  40 12
        gshA 4310832 .. 4310844 -  -2.6  -3.69283   GAAGCTATCTAACAA                CGGC ATTTA GCCA                CCTCCGGTAATTTTT  50 168
        luxS 4310267 .. 4310285 -   -16  -4.62069   GGCGCATTTGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTCAATTA 100 62
HHJ42_RS20895 4294420 .. 4294449 -  -6.3  -3.19523   TACTGAAAGAAACCA       GGGCGCGAATGCA TGGT CGTACTCGCGTCC        AGCAAGCCGCGCGCG  54 210
HHJ42_RS20885 4293486 .. 4293496 -  -8.2  -2.66272   CGGCACGCAAAGTTA                 GCCC GTC GGGC                 TGGATAAAAAATCTG  59 281
HHJ42_RS20860 4290937 .. 4290956 - -12.8  -3.29649   AGTGTAGCAGAGGAA            CGCGGCGC GTTA ACGCCGCG             GGGGTGAGCACAGGT  90 41
         kbp 4290380 .. 4290401 -  -4.3  -3.07816   GCGCCAGTGAGTTAA           TGCGCCAGC ATTT ACTGACGCC            AATTCCCATTATCCA  48 63
HHJ42_RS20785 4276218 .. 4276228 -  -2.4  -2.69202   TAAATCATGACAGCA                 GTCC TCT GGCC                 TTAAGCTCTGCTCCC  39 4
HHJ42_RS20780 NONE
HHJ42_RS20775 4275003 .. 4275027 - -12.2  -3.71148   GAAAACGCATGCAAA          GCCATGCACC TTATC GATGCATGGC          TTTTTTCAGTAAAAA  89 62
        ratA NONE
HHJ42_RS20745 4268644 .. 4268660 - -12.3  -5.10077   AAAGACGTTAAAAAA              GGTGCTC AAT GAGCACC              TTTTTTCTGTCTGTT 100 39
        grpE 4264733 .. 4264758 - -14.7  -4.45544   GCGGAGTAACGAAAA         CGGCCCGGCAT TCGC ATGCTGGGCCG          TGATTTATTACGAAA 100 48
         ffh 4260990 .. 4261017 -   -12  -4.43307   GTGTGAATAAAACAA        CCGGACCCCATC GAGG AACGGAGTCCGG         TGTCATATTAAAAGC  95 108
        rpsP NONE
        rimM NONE
        trmD NONE
        rplS 4258909 .. 4258930 - -11.5  -5.82281   AAACAGACAAAAAAA           GGGCCAGCC AATT GGCCAGCCC            TTCTTAACAGGATGT 100 56
        aroF NONE
        tyrA 4253691 .. 4253718 - -18.6  -4.74801   CAACCTGATGAAAAA        GTGCCGGATGAT GTGA ATCATCCGGCAC         TGGATTATTACTGGC 100 33
        rluD NONE
        pgeF 4248995 .. 4249009 -  -5.7  -3.83998   CTACTGGAGATTAAA               TGAGG TCATC CCTCA               ATTATTCAAGGTTAT  61 98
        clpB 4246354 .. 4246370 - -10.1  -5.04597   ACTTATAGACAAAAA              CGAGCCC CGA AGGCTCG              TTTTATCATTACTGG  93 34
HHJ42_RS20620 4244360 .. 4244373 -  -2.3  -2.72471   TTTCTATCAGACAAT               CTGTG TGAG CACTG                CAAAGTACGCTTCTT  40 34
HHJ42_RS20615 4244162 .. 4244197 -    -7  -4.00532   TTTTTAAAGAGCAAA    TATCTCAAACATCACC CGAA GATGAGTTTTGAGATA     TTAAGGCAGGTGACT  68 61
HHJ42_RS20610 NONE
         rrf 4240883 .. 4240902 - -13.6  -5.17576   CACCAACGCAAAAAA            GCCCAGTC TTCC GACTGGGC             TCTTCGCTTAATTTG 100 43
HHJ42_RS20560 4229599 .. 4229626 - -13.4  -4.27192   AAATTTGCAGGAAAA        CGCCGGATGGCA GCGT TGCCACCCGGCT         GATTTATCAGGCTTT 100 32
        grcA 4228162 .. 4228185 - -16.8  -5.65513   TATTAACGAAAAAAA          GCGGAAGAGG TCGC CCTCTTCCGC           TTAGTAACTTGCTAC 100 48
HHJ42_RS20540 4226361 .. 4226375 -  -5.6  -4.09864   AGTTACGCCCGAAAA               CGCGTG CGC CAAGCG               AGAAGCAGACCGGCA  65 231
        trmN 4224154 .. 4224180 -  -6.6  -3.62775   ACCATGCTCCAACAA         GAAATAGACGAA TAT TACGCCCATTTC         CGCGTCTCAAATAAT  63 190
        rseD NONE
        rpoE NONE
        rseA NONE
        rseB NONE
        rseC 4219630 .. 4219647 - -11.3  -4.32607   GCAAAATGCAACAAA             GCCAGTG AAAT CACTGGC              TCGCGTCTTCCGAAG  93 18
        lepA 4217607 .. 4217628 -  -5.1  -2.68015   GGCAATCACCAGAAT           CAGGGCAAA CATA TTCGCCATG            CCAACTCCTAAGGGT  48 40
        lepB 4216608 .. 4216640 - -21.5  -4.07877   TTATCTCATAAATAA      TTCACGTTGTCGCCA TAA CGGCGACAACGTGAA      CGAAGATGGCTATTA 100 38
         rnc NONE
         era NONE
        recO NONE
        pdxJ 4213304 .. 4213319 -  -2.6  -2.78996   TATCCGTACCTAAAC              CTAATA TTGC CATTAG               CCACGCGCTTCCAGC  41 22
HHJ42_RS20465 4212876 .. 4212912 - -11.6  -4.83759   AATTAAAGTTAAAAA    GTAAAACCCCCGTTCC TTACC AGTTCGGGGGTTTTAC    TTTATAAAGAGAACG 100 49
        shoB 4212386 .. 4212415 -  -7.8  -3.78022   TTTATAGTTATTAAA       GGCGCGTCCGAT TGGTTC ACCGGATGCACC        TTAAGTACGTTTCCT  71 45
        yfhb NONE
        tadA 4209273 .. 4209289 -  -5.1  -3.28712   CCTCGCCGCGTACAA              TATGGGC TAT GCGCATA              TGTTGGATGCCCGCG  54 408
        purL 4203878 .. 4203895 -  -8.4  -5.51046   TAAAGACACAAAAAA             GCTCCC GAAGTT GGGAGC              TCATAATAGCGGTTG 100 104
        qseE 4201886 .. 4201902 -  -2.9  -3.05997   CGCGGAGAAACCAGA              GCGTACA TGT CGTACGT              GAAGATTTCGAGCAC  43 94
        qseG NONE
        glrR NONE
        glnB 4199286 .. 4199300 -    -5  -4.49756   CGTGAAACAGGAAAA               CATTCA TTA CGAATG               CTTTGGCCCGCATAA  70 95
        glyA 4196509 .. 4196526 - -11.3  -4.00066   GCGATAACGTAGAAA             GGCTTCC CGAA GGAAGCC              TTTTTTCAACAGATT  91 52
HHJ42_RS20385 NONE
HHJ42_RS20380 NONE
HHJ42_RS20375 4188221 .. 4188256 -  -3.8  -3.30452   TAACAATACGATTAA    TTTTCATCCCTGCCGC ACCC GCGCCAGGGGCGTTAA     GGTTTAGCGTTTCGC  50 29
HHJ42_RS20370 NONE
HHJ42_RS20365 4186097 .. 4186126 - -13.5  -2.66695   GCCGTTAGGAAAGAT       GCCGGATGCGGCG TAAA CGCCTTATCCGGC        CTACCGCTCCAACAC  86 148
HHJ42_RS20355 4184151 .. 4184164 -  -2.4  -4.13282   AGCAGATCCGCAAAA               TGCT CGAATC AGCA                TGAGGGAACAACTTT  55 20
        trmJ 4180003 .. 4180022 -  -4.2  -3.30771   TTACAGGCCTGATAA            GACGCGTT AAGC ATCGCATC             AGGCAACCACTGTTA  50 38
        iscR 4179202 .. 4179217 -  -4.6  -3.40788   ACTCAATGCAAGGAA              CCAGGC TACC GGCTGG               ATGTACGACCGTGTT  52 84
        iscS NONE
        iscU NONE
        iscA 4177154 .. 4177180 -  -8.7   -4.6951   ATCAGGTAAAACAAA        CCCCACGCGCAG GCGA CCACG-GTGGGG         TTATCGGTATGCGCA  89 41
        hscB 4176564 .. 4176575 -  -2.2  -2.78867   CTAATTTGTAATAAG                GCCA TGTT TAGC                 TTCCAGAAATTAAAA  40 35
        hscA NONE
         fdx NONE
        iscX 4174142 .. 4174163 - -13.7   -4.4261   CGTTTAACAGCAAAA           CGGGCTACC CCCA GGCAGCCCG            TTCATTCACTCGGCT 100 31
        pepB 4172798 .. 4172809 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG TTTA CGCC                 GCATCCGGCATATTA  63 43
        sseB 4171438 .. 4171453 -  -7.5  -5.49234   ACAGGCAATAAAAAA              CCGCC GAATTT GGCGG               TTTTTTATTGCTGGT 100 480
        yfhM NONE
        pbpC 4163052 .. 4163064 -  -4.9  -4.09511   AACATTTTTTTAAAA                TAAAC CCA GTTTA                AGCAACAATCAGGGA  63 50
         ndk 4162417 .. 4162448 -  -8.7  -5.04249   GGTTGAAAAAAGAAA     CG-CCCCGG-TGAGC GGCT GCTCGTCCGGGGGCG      CTGCATTGTACAAAT  91 86
   trmG/rlmN 4161165 .. 4161198 - -14.8  -3.82117   TTCATTCATAAAAGA     TTACGCCACGG-TAC ATAAA GTAACCGTGGCGTAA     TGGCTATCAGACCGC 100 32
        rodZ NONE
        ispG 4158739 .. 4158759 - -13.3  -3.00298   GGGTTCAATCATACA            CGGGAAGCG AGG CGCTTCCCA            TCACGTTATTATTTT  86 34
        hisS NONE
        yfgM NONE
        bamB 4155505 .. 4155536 - -13.8  -3.90048   TCGTTGTTAAAAACA      GGAAAACGGCCCCT GTCC AGGAGCCGTTTTCA       AAGTGAACGACAGAG 100 45
         der 4153959 .. 4153972 -  -3.9  -3.04853   GAAAGGGAAACCAGA               TAAGT GATT ACTTA                CTTTTCTTGATATGC  47 19
HHJ42_RS20225 4153632 .. 4153672 -  -5.8  -4.48713   TCCACTAATAACAAA  TTGTTTTACCATTCAT GCATTAAAT ATAAATGATAAAACAA  TACATTCACATGATA  72 41
        sinH NONE
HHJ42_RS20215 4150234 .. 4150257 - -15.4  -3.63589   CAAAATATGCGGAAA          CAGCATTCCC TTGC GGGAATGCTG           CTGAGTACGCGTTAT 100 37
        guaB 4138993 .. 4139015 - -14.9  -4.33674   AACAGATAATATAAA           TCGCCCGAC ATGAA GTCGGGCGA           AGAGAATCAGGAGCC 100 32
        guaA 4137308 .. 4137327 - -12.2  -5.71295   ACATAAAAACAAAAA            CCCTCTGT AAAA ACAGAGGG             TTGAGTTAGTATCTG 100 74
HHJ42_RS20190 4135714 .. 4135724 -  -2.4  -3.70722   GTCACCAACAGACAA                 CCAG GGG CGGG                 AGCGTGCTGCATGAA  49 234
HHJ42_RS20140 4131015 .. 4131032 - -12.7   -4.4296   GAATAGATATGAAAA             GACCGCC GGGT GGCGGTC              TACAGAGGGTTGTAG 100 48
HHJ42_RS20130 4129116 .. 4129129 -  -3.7  -5.52909   CAAGACGTAAAAAAA               TGCGC TATC GCGCT                GGTATTACTTGATAA  88 30
HHJ42_RS20125 NONE
HHJ42_RS20120 NONE
HHJ42_RS20115 4127634 .. 4127645 -  -2.2  -3.09933   CGTGAATTGACTGAA                CCTC AACT GAAG                 GTGTTGAACCAATGC  42 140
HHJ42_RS20105 NONE
HHJ42_RS20100 NONE
HHJ42_RS20090 NONE
HHJ42_RS20085 NONE
HHJ42_RS20080 NONE
HHJ42_RS20075 NONE
HHJ42_RS20070 4122892 .. 4122909 -  -9.8  -2.84298   GACATGTCACAATCA             GCCCGC CGATTC GCGGGC              TTTTTTATGCAAAAG  70 30
HHJ42_RS20055 NONE
HHJ42_RS20050 NONE
HHJ42_RS20045 NONE
HHJ42_RS20040 NONE
HHJ42_RS20035 4117849 .. 4117859 -  -4.6  -3.41325   CACAGGTTAATAACA                 GGCG TTA CACC                 ACGCGGGCTTCTGTT  52 19
HHJ42_RS20030 NONE
HHJ42_RS20025 4116986 .. 4116999 -  -9.5   -4.1552   CACTCCTGCAATAAA               GGGGC CGAA GCCCC                TTGTCTGATCCGCGA  84 44
HHJ42_RS20020 NONE
HHJ42_RS20015 4115736 .. 4115759 -    -6  -4.09551   AAATTTCATAAATAA          CATTGCTGCT GTTC AGCACCAACG           CACCATCTTTGATAA  68 305
HHJ42_RS20005 NONE
HHJ42_RS20000 NONE
HHJ42_RS19995 NONE
HHJ42_RS19990 NONE
HHJ42_RS19985 NONE
HHJ42_RS19980 4105100 .. 4105131 - -12.4  -3.74224   GCGAAAGTATTGAAA      CATCAACCGTATCG ATAT CGACACGGTTGATT       ATGACGGTAACTTAT 100 71
HHJ42_RS19970 4103678 .. 4103693 -    -9  -3.73386   ACAGAATTATTTAAA              GGCACA TCCC TGTGCC               GCCGCCCGTCAGAAG  77 34
HHJ42_RS19965 4102903 .. 4102917 - -12.8  -5.24129   TTCGTCCACAAAAAA               GCCCGC GCT GCGGGC               TTCTATTAATGCAGT 100 31
HHJ42_RS19960 4102346 .. 4102368 -  -2.6  -5.47159   CTGGAAGACAAAAAA           GAATACAGTG CCC CACTGAAGCC           CGGCTACCGCAGTCT  88 320
HHJ42_RS19945 4098654 .. 4098666 -  -5.5  -3.36515   GTTTATTTGCAAACA                CCCTG CTT CAGGA                AAAGTATACCGCGCA  56 60
HHJ42_RS19940 NONE
HHJ42_RS19935 NONE
HHJ42_RS19930 4097315 .. 4097335 -  -9.7  -2.85847   AATGCCCAGATCATA            CCGCCAGCA CCT TACTGGCAG            TGATGTACCGCGCGC  70 0
HHJ42_RS19925 4096666 .. 4096685 - -12.2  -5.31275   CGTGAGTATAAAAAA            CCCTCTGT AGTA ACAGAGGG             TTTTGTTCATTCATA 100 156
HHJ42_RS19905 4094710 .. 4094728 -  -3.1  -3.41229   AGATGCTCAGCAGAA             TCCCCCA CATCC TGAAGGA             GGTGTATTCAGACAG  48 173
        pdeF 4092043 .. 4092055 -  -2.6  -4.10657   TTATATTCTGCAAAA                CAGC GACTT GCCG                GGTTTTAATCAGGAA  56 421
         upp 4085966 .. 4085984 -   -11  -5.81412   TTTACTCAAAAAAAA             GCCGACTC TTA AAGTCGGC             TTTAATTATTTTTAT 100 44
        uraA 4084584 .. 4084634 -  -2.4  -2.72649   AGTTTACCACAGAAT CCCATGATGTTTGAACCGGGCAGC AAC ACTGCCCGGTCGGTACATTATTTG TCTGTTATATCCGCG  40 19
         hda 4083412 .. 4083424 -  -2.6  -4.86731   CCTGCTGAAAGAAAA                CGGC GTGGA GCCA                GAAGTGGTGCTCTAC  68 433
HHJ42_RS19850 4080230 .. 4080255 -    -4  -3.93963   ATCAGCACCGATAAA         CCCGAAAAAC TCTCCC GTTTTGCGGA          AAAAGAGCTGCTTAA  58 347
        dapA NONE
        bamC 4077334 .. 4077353 - -11.4  -5.34555   TCATATCAGAAAAAA            GGGCCGGA TGAC TCCAGCCC             TGTATTTTTACTTGC 100 33
        purC 4076423 .. 4076442 -  -2.8  -2.75252   AGCACGGCAAGATGA            TGAACAGA AAAA TCAGTCCA             GCTGTACACCCAGGC  41 18
HHJ42_RS19820 4074989 .. 4075000 -  -5.8  -4.39002   AAATGCTGGACAAAA                TGCG GCGT CGCA                 ATAGGGTCAGGGCAA  70 429
        ypfH 4072529 .. 4072564 - -15.4  -3.26428   GAAGAAGTAAGCTAA    GTGGCCGGATAAGGCG TTAA CGCCGCATCCGGCCAT     GATGCCTGATACAGT 100 65
        ypfM 4070281 .. 4070302 -  -7.3  -5.57396   ATAAGCAATAAAAAA           GGCGACA TGCCAATG TGTCGCC            CTTTTCAACTTTCCG 100 76
        aegA NONE
        nudK NONE
HHJ42_RS19765 4060902 .. 4060918 -  -5.8  -2.96656   CAGAGATGGAAATCA              CCCTGC AAGCG GCAGAG              AAATTAGCGGGAGAA  52 402
        maeB 4055631 .. 4055660 - -15.1  -3.66378   TATATTGCAGCTAAA       CCGCTTACCCTGA ATAT TCAGGGTAAGCGT        GAGAGTTAAAAAAGA 100 42
        eutS NONE
        eutP NONE
        eutQ NONE
        eutT NONE
         pta NONE
        eutM 4051703 .. 4051728 -    -9  -3.15182   ATGAAAAAGGAGAGA         GCGTGACGCC CGAATC GACGTCACAC          AAGGTGATTACAGGT  70 33
        eutN NONE
HHJ42_RS19710 4049623 .. 4049649 - -10.1  -2.98761   ACCAGGAGGAAATGA         GGTCGCCGCAT GGCTA AAACGGCGACC         GAATTGCTGCTCAAG  73 303
        eutG 4047587 .. 4047629 - -11.2  -2.76583   ATAAGACGCGGAAAG CATCGCATCCGGCAATTGCA CCG CGCCACTGGCGGATGCGGCG TGAACGCCTTATCCG  77 298
        eutH NONE
        eutA 4044790 .. 4044807 -  -4.1  -2.58544   CTTTAGTTTCATAAG             TCGTTCC CTCA GGAAGGA              AATGCGAGTGATTTC  44 16
        eutB NONE
        eutC 4042500 .. 4042516 -  -2.1  -3.89336   CGAATCAAATCTAAA              GCTGGCA TGA TGCCTCC              TTATCGGGTCATGTT  53 26
        eutL NONE
        eutK NONE
        eutR 4039995 .. 4040015 -  -6.7  -4.29738   GTAGAGCGACGAAAA            GCGATGGCC TAC GGCGAGCGC            GAGCGCAATTTTCAG  75 247
HHJ42_RS19650 NONE
HHJ42_RS19645 NONE
HHJ42_RS19640 4036674 .. 4036692 - -10.3  -4.20868   TCCTGAAAATAATAA             TGCCACG CAATC CGTGGCA             TTGTTGGGCGCTATT  85 81
        yfeX 4035702 .. 4035729 - -11.3  -5.16071   AAGCAGTAATAAAAA        GGCCAGTCAGT TGTGTT ACTGGCTGGCC         TTTAATCAATGAATC 100 49
        ucpA 4032144 .. 4032167 -   -11  -4.01135   GGGAATAAGACGAAA          TCCTCCCCAC AAAT GCAGGGAGGA           AACAGAGGTGAATCA  86 38
        cysP NONE
        cysT NONE
        cysW NONE
        cysA 4028163 .. 4028188 -  -6.8  -5.14563   CTTGCCATTAAAAAA         CCCGGA-TCGC GGGAA GCGCCTCCGGG         CGTTTAACATTCACT  84 48
        cysM 4026883 .. 4026895 -  -3.3  -3.15758   AGAAGCCCGTATCAA                CGCCA TGC TGGAG                GGATTAGCACAGAAA  45 295
        pdxK 4025815 .. 4025832 - -12.7  -4.65895   TGCCGCAGTGAAAAA             TGGCGCC CATC GGCGCCA              TTTTTTTATGCTTCA 100 31
        zipA 4019639 .. 4019655 - -10.8  -4.67904   CATCAATGCTAAAAA              CCCCCG ACAAG CGGGGG              TTCGAAGAGGAGTTA  95 57
        ligA NONE
HHJ42_RS19545 4017345 .. 4017378 -    -3  -3.12505   ACGCCAGACCGAACA     GTTACAGGCGCAGC AGGAAA GCAGCGCCGATAAA      GCTTAAAGCGGACGC  43 28
HHJ42_RS19535 4015051 .. 4015075 -  -7.1  -2.84999   ACCAAACCTATTATA          CCGGCGATA ACGGTTA TGTCGCCGG          TTGGGTTGCAGGTTA  54 320
        xapA 4013449 .. 4013469 -  -7.5  -2.78384   CCTTGTCGCATCATA            TGGCCTCAC TCA GTAAGGCCG            TTTATTGTTGTTTTA  58 42
        xapB 4012138 .. 4012160 -  -5.5   -4.4648   ACCTTTATCATAAAA           GCAGCCCCA AGGAA CAGAGCTGC           GAATCCTTTTAATGT  72 34
HHJ42_RS19515 NONE
        xapR 4010933 .. 4010947 -  -9.2  -5.17576   CACCAATGTAAAAAA               GCGCCC TAA AGGCGC               TTTTTTGCTATCTGC  93 111
        gltX 4008809 .. 4008831 - -10.5  -5.73978   AGCATAAATAAAAAA           CGGCAGGGG TATCT CTCCTGCCG           TTTATCTTTTATGCG 100 45
HHJ42_RS19470 NONE
HHJ42_RS19465 4007607 .. 4007626 - -11.4   -5.4251   GGCAGAGACAAAAAA            CCCCCGCT TTGC AGCGAGGG             TTTGAAATTTGGTGG 100 35
HHJ42_RS19460 4005193 .. 4005240 - -17.2  -3.01791   ACTGGTGCTGTAAGA CCATACATAAAAAAGCCGGGGA TAAT TCCCCGGCTTTTTTACGCCTGT TAATCAGCTAATGGC 100 25
HHJ42_RS19450 4002298 .. 4002329 -   -13   -2.6627   TCAATGGAGCACAAT      GCCTGATGCGACGC TAGC GCGTCTTATCAGGC       CTACAAACCAGCTCT  84 110
         glk 3999370 .. 3999393 - -11.8  -2.81922   TATGATTTAAAAGAT          TATCGGGAGA GTTA CCTCCCGATA           TAACAGGAAGGATTT  79 39
HHJ42_RS19430 NONE
HHJ42_RS19425 NONE
        ypdF NONE
        ypdE 3995431 .. 3995446 -  -3.3   -3.0644   ATTGAATCGTTAACA              TAACC GCTCCG GGTTA               ATCAGGAGATCATCT  45 35
        ptsP 3992584 .. 3992595 -  -5.8  -3.03159   GTAACGTGGTGAATA                TGCC GCCG GGCA                 ATTCGCAGCCGCGCG  53 366
        alaC 3987961 .. 3987980 - -13.6   -4.8622   CTGTGCAATGAAAAA            CAGGAGCC ATCA GGCTCCTG             TTTGCATTTCTGGCG 100 47
HHJ42_RS19375 3985765 .. 3985778 -  -6.7  -5.46276   AAGAGACAGAAAAAA               CGTCA GTGA TGACG                ACAACGCATTCTACA 100 243
HHJ42_RS19365 3984626 .. 3984662 - -11.9  -3.92542   GCGAGCGCCAAATAA    TTTTATGACCACAAC CTGTCGT ATTGTGGTCATAAAA    AATTGTCGACTGGAG  93 80
         frc 3982930 .. 3982948 -  -4.4  -2.94161   GAAATTTTTATAAAT             TGGGAGCC AGA AGCCCCCG             TTAATATCAGATGGC  48 32
         oxc NONE
        yfdV 3980140 .. 3980164 -  -6.5   -5.0133   TATGCCTTGAAAAAA         GCCGAAG-GT GAAAAG ACACTTCGGC          ATTTATGTAAAATCA  81 54
        emrK NONE
        emrY 3970161 .. 3970192 -  -6.6  -2.53213   TAACGTTTCAACGCA      GCATCGC-CATCC TTTCCCT GGGTGAGCGATGC      TGCCGATGACGCAGA  54 86
HHJ42_RS19300 3967261 .. 3967272 -  -2.2  -3.09289   GAGTAGCCGAATATA                TCCG CAGC CAGA                 AAAACGGGAACTGTC  42 109
HHJ42_RS19290 3964763 .. 3964773 -  -4.6  -2.62265   ATTTAGAGATAAGAG                 CGAC TTC GCCG                 TTTACTTCTCACCAT  46 34
HHJ42_RS19285 3963155 .. 3963167 -  -9.1  -3.78953   ACGCTGATGACTAAA                CAGCC CTG GGCTG                GGCGATGTAACCATC  77 324
        mlaA 3960860 .. 3960879 -  -7.9  -5.64873   CTTAATAAGAAAAAA            GGTGAGT TTTGCG ACTCACC             TTTTTTGTTTGTTTC 100 41
HHJ42_RS19255 3958794 .. 3958820 - -20.2  -5.26907   GAAGAGAAAAGAAAA         CGCCCCTGCCAG CAA CTGACAGGGGCG         TATGTACCCGAGAGG 100 43
        fadI NONE
        fadJ 3954983 .. 3954993 -  -5.4  -2.72028   CGCATGATAAAAACT                 TGCA TAT TGCA                 CCGCTTTTGTTAACC  50 222
        sixA 3954465 .. 3954493 -   -14  -2.95896   GTATGACGGAGAAAC       TGCCCGGTGTACG CGCA CGTA-ACCGGGCA        TTGATTGCTTAAATT  87 34
HHJ42_RS19235 3953341 .. 3953363 - -15.6  -3.61398   TTGCGTGTTGAATAA           CCCCACAGCA GAA CGCTGTGGGG           TTGTCACATCAGAGA 100 34
HHJ42_RS19230 3950510 .. 3950522 -  -4.8  -3.53091   ATCGCTTTCGTTAAA                CACC AGACG GGTG                CGATCCGGGGTGACC  56 146
HHJ42_RS19220 NONE
HHJ42_RS19215 NONE
HHJ42_RS19210 NONE
HHJ42_RS19205 3947449 .. 3947480 - -14.4  -3.54951   GACCGCATGACATAA      CGGACAACGGGGCC TGAT GGCCCCGTTGTGTG       GTGTATACGCTACAG 100 35
        prmB NONE
        aroC NONE
        mepA NONE
HHJ42_RS19180 NONE
        epmC NONE
HHJ42_RS19170 3941819 .. 3941861 -   -12  -3.53811   CGGATGCGGCGTAAA CGCCTTATCCGACCTACGCG TTA CCTGTAGGCCTGATAAGACG CGATAAGCGTCGCAT  88 68
        fabB 3938301 .. 3938318 - -11.3  -4.64598   CAATGATGTGAAAAA             GGGAACC ATCG GGTTCCC              TTTTGCGTTAGTGCC 100 105
HHJ42_RS19155 3936970 .. 3936980 -  -3.2  -3.74747   TTAACCCCGACGAAA                 CGAC AGT ATCG                 TGACAATAATTCCCA  53 0
        pdxB 3934688 .. 3934715 -  -7.7  -4.04579   TCCAGAAATAGCAAA        GCTCCCTGCCA ATGTTA CAGCAGAGAGC         ATGAAGAAGAGATTA  74 38
HHJ42_RS19140 3933237 .. 3933247 -  -2.4  -4.56775   AGCGGTTCGTAAAAA                 TGGG TTA CCCC                 TTTACTCAATACCGC  61 427
HHJ42_RS19130 3932071 .. 3932083 -  -3.3  -5.24531   ACTTTGGATAAAAAA                GTGGT CGA ACCGC                AGAGTTACTTTTTAT  77 37
        accD 3930992 .. 3931014 -   -17  -4.46656   GTGAGAATAGCAAAA           GGGCAGAGCC AGT GGCCCTGCCC           TTATCAGTTATCAGG 100 36
        folC NONE
        dedD 3928606 .. 3928631 -  -9.8   -5.1356   GCGCATCAATAAAAA         TGGCGCTGAA AAAATA TTCAACGCCA          TCGACTTTTTATGCC  93 429
        cvpA 3928014 .. 3928030 -  -2.9  -2.64243   CCACATCTCAGAGCA              CTTACGC TCT GGGCAAG              AAACTTGACGAGCTT  40 10
        purF 3926430 .. 3926448 - -12.4  -2.53263   GGGAGTTGCAAGTCA             GGGTGCCA GAC CGGCACCC             TGAGTGAAGGCATCA  81 38
        ubiX 3925770 .. 3925788 - -13.2  -4.07687   ATCGCGGTTGCAAAA             TTGCCCTG AAA CAGGGCAA             CAGCGGAGTTATGCG 100 34
        argT 3924598 .. 3924608 -    -4   -4.3739   TATCGTGCCATAAAA                 TTGA CCA TCAA                 GGCAAAATATCCCGC  64 166
        hisJ NONE
        hisQ NONE
HHJ42_RS19080 NONE
        hisP 3921446 .. 3921469 -  -8.8  -3.45027   ATTCCCCATGAAATA          CTCCGGCAGC GTTA ACCACCGGAG           AGGAAATTATTTCAG  71 32
        rpnB 3919866 .. 3919906 - -12.6  -3.93583   GAATTTACCCATAAA CTCTGCGCCCG-CTGGGAA GAGA TTGCCTGTCGGGCGCAAAG  TGACAAAACGCGAGT  93 509
        yfcF NONE
        yfcE 3916986 .. 3917000 -  -3.5   -3.2115   TAAATTACGGATTAA               TCGCG ACCTG CGCAA               TGATACTTTGATCAT  46 0
        yfcD 3916354 .. 3916367 -  -9.5  -3.17553   CTAAAAATGTTAAGA               GCCGC GATT GCGGC                TCTTTTTTCATTCTG  72 33
HHJ42_RS19020 3910374 .. 3910392 -    -6  -4.60487   TACTACGGTGAAAAA             GAAGGC TGAGTAT GCCTTC             TTTTATATGCGTAAT  78 51
HHJ42_RS19015 NONE
        hxpA 3909146 .. 3909163 -  -9.8  -5.24129   TTCTGCCATAAAAAA             GCCCCG ACGAGA CGGGGC              TAAATCATGATCAGG 100 45
HHJ42_RS19005 3906901 .. 3906911 -  -3.2  -5.09225   AGGCTATTGAAAAAA                 TCGC TCA GCAA                 AAACTGGTCGATATG  77 378
        lrhA 3903373 .. 3903402 - -10.1  -5.86061   TTTTACTAAAAAAAA       GCCGCTGGGGTTTA AAA TAAACC-CAGCGGT       TCGTTTTTACACTAT 100 70
        nuoA NONE
        nuoB NONE
        nuoC NONE
        nuoE NONE
        nuoF 3897784 .. 3897803 - -11.4  -2.71144   CACTGGCGGCAAGCA            CCGACGCT TCCC AGCGCCGG             ATGCCAGCAAAAGTA  77 186
        nuoH NONE
        nuoI NONE
        nuoJ NONE
        nuoK NONE
        nuoL 3890810 .. 3890822 -  -5.5  -4.08216   TTATTCCTTGTAAAA                GTCCC GTC AGGAC                CGGATTTTCAACGAA  65 153
        nuoM NONE
        nuoN 3887750 .. 3887768 - -11.7  -5.86061   GGGCACCAAAAAAAA             CCGCCGA ACATG TCGGCGG             CTTTCTGACTTACAA 100 50
HHJ42_RS18900 NONE
        elaB 3883946 .. 3883976 -    -9  -2.85847   AAGCCTCACATTATA       CGGGGTACGACA AAAAAAA TGCAGTACCCCG       GTGTAGGGAGGTTTT  67 39
        menF NONE
        menD NONE
        menH NONE
        menB NONE
        menC NONE
        menE 3876856 .. 3876870 -  -5.8  -3.23045   ATTTACAGATTAACA               GATAAA CTC TTTATC               AACGGCAATGGAATG  54 71
        pmrD 3876370 .. 3876384 -  -2.1  -4.16101   AAAACACTACATAAA               CTTGC GCTAA GCAAA               GCCTATGCCTTGCTC  58 181
HHJ42_RS18820 3868252 .. 3868273 - -13.1  -2.93073   CTTCTGTAACAATGA           TGACAGCCA TTAC TGGCTGTCA            GATTGAAAATTTAGT  86 36
HHJ42_RS18810 3866969 .. 3866991 -    -9  -3.38832   TAGTAAGAAACTGAA           TGGCGCGACA GAA CGCCGCGCCG           GAAGGCGTCAGAAGC  71 33
HHJ42_RS18805 3865678 .. 3865694 -  -7.9  -3.72576   TGCCGGTGCAGTAAA              CCGGCAC AGA GTGGCGG              AATCAGACAGATAAG  71 28
        rhmD 3863433 .. 3863466 -  -8.1  -3.21772   AAGCTCCTTAGAATA     TGTGGGCGTTACCGT TGTC ACAGCAACGCCCGGA      GTGATTAGTGGCTGT  64 30
HHJ42_RS18790 NONE
        yfaU 3861268 .. 3861300 -  -7.7  -3.43553   ATAACCACTAATTAA      CACAGGCCCACAG CCGATCC CCATGGGCCTTTG      ATATCAATAACTACC  67 29
        glpT NONE
        glpQ 3853115 .. 3853140 - -15.5  -2.86743   AAATTTGATATGAGA         CAGGATGGCGC ATGA ACGCCATCCTG          CAGTAACATTACTCT  93 34
        inaA 3851933 .. 3851958 -  -7.6  -3.53811   TTCAGCCGGGGGAAA         TTTTGCCCTG TTGTTG CCGGGCAAAA          GGCGATATTGAAATC  65 103
        yfaL 3843588 .. 3843599 -  -7.2  -3.30124   CCGTAGGCCGGATAA                GGCG TTTA CGCC                 GCATCCGGCAACCGT  63 57
        gyrA 3839972 .. 3839985 -  -8.1  -5.15969   TTTCAATTCAAAAAA               GGGAG ATGG CTCCC                TTTTGGCATGAAGCG  87 47
HHJ42_RS18705 NONE
HHJ42_RS18700 3837455 .. 3837476 -  -5.1   -4.4831   AGCGAGCAAAAAGAA           TGTTCC-CCC GGC GGGCGGCACA           TAGTTACTGGAAGGA  71 99
HHJ42_RS18695 NONE
HHJ42_RS18690 NONE
HHJ42_RS18685 3830518 .. 3830543 - -11.1  -4.75308   ATTAACATGTAAAAA         CGCCCGATAGC GAAA GTCATCGGGCG          TTTTCTTGAACATTG  95 63
        rcsC 3820162 .. 3820195 - -12.5  -3.00585   GATTACATTAAAGTA     GGCCAGATAAGACGC GTCA GTGTCTTATCTGGCA      TTTGCACGGATTGCC  83 68
        ompC 3814798 .. 3814811 -  -9.5  -5.43514   AAAACAATGAAAAAA               GGGCC CGCA GGCCC                TTTGTTCGATATCAA 100 47
        apbE NONE
         ada NONE
        alkB NONE
        yojI 3810119 .. 3810147 - -10.3  -2.53271   GTATTTTTAGAATAT        TGACCTGCCGG CAGCAGT CCGCCAGGTCA        GCGTCGTAATATTAT  70 37
         mqo 3808252 .. 3808293 - -16.8  -3.57462   GATCCGACGCTGAAA GCATACGCCACATCCGGCA AACCA TGCCGGATGTGGCACAT-C ATTACAACGCAATAT 100 27
        napF NONE
        napD NONE
        napA NONE
        napG NONE
        napH NONE
        napB NONE
        napC 3801411 .. 3801421 -    -4  -3.09193   AGCATACCCACGCAA                 TAAC CCT GTTA                 AAAACCTGGCTCGAC  47 23
        ccmA 3800784 .. 3800800 -  -2.1  -2.53119   AATGCGCCAGAACAT              CATGCGG CCC CCGTTTG              CGTCAGTGAAATGCG  39 8
        ccmB 3800121 .. 3800147 -  -3.1  -2.59883   AAAATCAGTAATCCA        GCGTTATTGAAT GCTG ATTCG-TAACGC         TGCCGCCGTCGCAAA  42 2
        ccmC NONE
        ccmD NONE
        ccmE 3798637 .. 3798673 -  -4.3  -2.88544   TCCTAGCGCCAGACA    CAGCAGCCCGTTACCAA TTT CTGGCATCATGATGCTG    GGTCCTTATAAACAC  48 15
        ccmF NONE
        dsbE 3796167 .. 3796179 -  -3.3  -5.07486   CACGCCCAATAAAAA                CCTCA TTG TGCGG                CCTCCTTACTGTATT  74 15
        ccmH 3795089 .. 3795115 - -15.2  -5.18726   GGGGCACAATAAAAA         TAGCCCGATGGC ATC ACCATCGGGCCA         CTTTTTATTTACTCT 100 30
HHJ42_RS18520 NONE
HHJ42_RS18515 3793235 .. 3793252 -    -7  -4.70613   AAAATCCCAAGAAAA             CCAACC TATTGC GGTTGG              TTTTTTTATATCTGC  79 94
        yejK 3789756 .. 3789771 - -11.8  -5.06103   ATAAGTTGTAAAAAA              CCCCGC TCCG GCGGGG               TTTTTTGTCTCTGCA 100 126
        rsuA NONE
         bcr 3785468 .. 3785485 -  -7.7  -4.26202   ACATGTATCAACAAA             GGAAGCC TTTT AGCTTCC              TCGTTGTGCAATAGA  76 41
HHJ42_RS18470 3784485 .. 3784505 -    -6  -3.37487   TTAGATCCTGAAACA            CGCCACCG TTATC CGGCGGAG            TTCTCTGGTGGTCAG  56 344
HHJ42_RS18415 3771834 .. 3771846 -  -4.8   -3.2614   CACGCTCTATACCAA                CACG TCGCG CGTG                GGCTGGATCATCGCA  49 151
        fruB NONE
        fruK NONE
        fruA 3766443 .. 3766462 -  -9.3  -5.10461   GGCAGGCAAGAAAAA            GGGCAGA GATGTT TCTGCCC             TCAGATTGTTGACAA  93 213
HHJ42_RS18390 NONE
        psuG 3764260 .. 3764277 - -10.5  -3.74693   CTTCATGCCAGTAAA             CCCGGCG TCAG CGCCAGG              TTTTGGTATGTTTGA  80 75
HHJ42_RS18380 3762932 .. 3762982 -  -9.1  -3.05536   AAATTATTGGCAATA GTGCGATTGCCGGATGCAACGCTT AATA AGGCGT-ACATCCGGCAATGAAAC TCAAGCTAAACCAAT  68 26
        rihB 3761102 .. 3761133 - -14.4  -3.57406   TGCCCATCATAAATA      GCCGGGCCTGCATC TTGC GATACTGACCCGGC       TTGTTATCAACACTT 100 39
HHJ42_RS18350 NONE
        lysP 3755112 .. 3755131 - -13.6  -4.75776   AATGGAATTGAAAAA            GCCCTCTC GGTT GAGAGGGC             TTAGCAAGGAAGCGA 100 47
        cirA 3752689 .. 3752701 -  -7.7  -3.14132   TTTCTTGCTGACCAA                CTGCA ACC TGCAG                TACTGGCAGAAGCCG  61 194
        folE NONE
HHJ42_RS18325 NONE
        galS 3748691 .. 3748708 -  -6.3  -3.08371   CACATTGTTAAGATA             CTGTGAA ATCA CTCACAG              ATTGAAAGCGGTTAC  56 37
        mglB 3747411 .. 3747433 - -14.9  -3.88232   TTGGCCATACAATAA           GGGCGCAGT AAACG ACTGCGCCC           AATCAGTCTTATTTC 100 34
        mglA NONE
        mglC 3744595 .. 3744641 -  -5.9  -4.11484   GGTAACGTTGTAAAA CCAGCGACGCATCCGGCA TTTAGTTCCTGT CGCCGGATGCGGCG-TGA ACGCCTTACCCGGCA  65 219
        dusC 3737512 .. 3737536 -  -7.2  -3.48593   CATTGTCTCAGATAA          GCTGCGAT TCCACTATT ATCGCAGC          TTATCGATATCAATG  65 16
        mdtQ NONE
HHJ42_RS18250 3734444 .. 3734458 -  -5.6  -5.06414   GCGCGGGAAGAAAAA               GCCGGA TCA TCAGGC               GTAAAACTATTGCCC  80 149
HHJ42_RS18240 3733079 .. 3733114 - -14.8  -3.75015   AGAATCGTGAGGAAA    TGCTGCATTGCTGACA TTTA CGCCAGCAATGCAGCG     CAAAAGAACTTTCTA 100 38
        pbpG 3731986 .. 3732015 - -10.1  -5.33026   GAAGTGAAATAAAAA       TTACGGATGGCAGA GTA TC-GCCATCCGTAC       TTCATTTAATCGTTC 100 31
        bglX 3727704 .. 3727716 -  -4.8  -4.33907   GATAAATACTTAAAA                GGCA TATTT TGCC                CGGCGTTTCTTGCCG  68 83
        osmF NONE
        yehY NONE
        yehX NONE
        yehW 3723733 .. 3723752 -  -2.8  -3.32844   CGCTTTACTGTACAA            TCCTTTCG TTAA CATAAGGA             GTGCATTATGCGCAT  46 121
        btsS NONE
        yehT 3720329 .. 3720339 -  -3.2  -4.68593   TTGATGAGGCAAAAA                 GCCA TTT TAGC                 AGTCTTTTACAGGCC  66 32
HHJ42_RS18180 3719420 .. 3719446 -    -8  -4.62392   GAAGAATCAAAGAAA         TTCAGCGCCAAT CTG AACGGCACTGAA         ATTGCCATTACCTAT  84 408
        apbC 3700723 .. 3700755 -  -9.9  -4.85782   TGCGGCAAAAACAAA      TACACCGCATCAATG TAA CATCTCTGCGGTGTA      TGAAGAATAATCAGA  91 55
HHJ42_RS18125 3700179 .. 3700208 - -11.7  -5.54885   AATATCAATAAAAAA       GCTTAAATCATTC ATGT AAATGATTTAAGC        TTTCTAAATCCGATT 100 58
HHJ42_RS18120 3699348 .. 3699369 - -12.3  -4.54727   CCTCTTAAATTAAAA           GGCCGCCAT GGAG ATAGCGGCC            ATGTTAATTACCTGA 100 62
HHJ42_RS18115 3698637 .. 3698649 -  -3.3  -3.07895   GTCATTCTCAACATA                GGCAG CTC CTGCA                ATTAAATTTTGTCAC  45 27
HHJ42_RS18110 NONE
HHJ42_RS18105 3695030 .. 3695050 -  -8.2  -5.76949   CATCGCTAAAAAAAA            GCCCCCTC GGAGA GAGGGGGG            AATGCAGACACCTTA 100 80
        rcnR 3693059 .. 3693070 -  -5.8  -2.72013   ACGTGAAGAAGCAAT                GACC TGGT GGTC                 CGTGACTTCCCTACG  50 204
        thiM NONE
        thiD 3691435 .. 3691449 -  -3.5  -2.66008   AAAGCAGCTATAGTA               CGGTG CTCAC CACCA               GGCGTGGAAGTGGTG  42 17
HHJ42_RS18075 NONE
HHJ42_RS18070 NONE
        fbaB 3685133 .. 3685152 - -11.4  -5.83822   GACAGGCAAAAAAAA            CGGCCTCC CGGG GGAAGCCG             TAACGAAGTGCGCGT 100 110
        gatY 3684146 .. 3684167 -    -8  -2.71712   TTTTCCTTGTTAAAT           GGCAGGTGC GTTAT GC-CCTGCC           CTCGCAGCCACAATC  60 14
        gatZ NONE
        gatA NONE
        gatB NONE
HHJ42_RS18025 3680732 .. 3680742 -    -4  -3.26405   CTCAGGTAAAAATTA                 TTCT GCG AGAA                 CGGCTTTCTCTTGTT  48 12
        gatD 3679613 .. 3679635 - -13.4  -2.52623   TGTTTTGCACAATAC           CGGGCCAGCA TCT CACTGGCCCG           AGGTTTCAGGGAATG  84 31
HHJ42_RS18015 3678711 .. 3678755 -   -13  -3.39595   TTGAACCAGGGAGAA TCCGTAATGCCGGATGCGGTG TAAA CACCTTATCCGGCA-TACAGA ACAATACTACACCGT  95 32
HHJ42_RS18005 3676579 .. 3676589 -  -2.4  -4.24948   TGAGCATATGGAAAA                 CGCC AAA GGTG                 AAGCAATGCCGGTCG  58 485
HHJ42_RS17960 3663130 .. 3663151 -  -6.5  -3.05384   CCTTTCCTTATTTAA           GGCCCCTTCC TCG GGA-GGGGCT           TTCCCGTTTCAGCGT  56 239
HHJ42_RS17955 3662840 .. 3662850 -    -4  -3.28712   TTTGTTCGCTCATAA                 GAAA TCC TTTC                 TTAGAGAATTATTGA  50 212
HHJ42_RS17950 3662169 .. 3662190 -  -4.3   -2.7035   CTGATGCATAGACCA           GTCGCCAGC TCAC ACTGACGTC            CAGCCTTTTGGCGCT  47 13
        pphC NONE
        yegI 3659210 .. 3659230 -  -6.9  -3.19463   TTTATCAGCGATGAA            CTGGCTA CGCTGAT TAGCCAG            CAAGGGCTGGAAAGC  57 278
        alkA 3656773 .. 3656789 -  -2.9  -3.62354   CGCTGAAAGCAAATA              TGGCAGA TTA CCTGCTA              CTTGATGGTGAGTTA  51 372
         udk NONE
         dcd NONE
        asmA 3649955 .. 3649967 -  -4.1  -4.72272   CCGCTGGATGAAAAA                CGTGA ATA TCACA                CCATTGCCGGGCTAT  70 260
         wza NONE
         wzb NONE
         wzc 3644095 .. 3644128 - -10.3  -2.52464   TGCGGCGTGAACGTA     GGTCGGATAAGATGC GTCA GCATCGCATCCGACA      GCGGATCTCGTTATT  70 36
        wcaA NONE
        wcaB NONE
        wcaC NONE
        wcaD NONE
        wcaE NONE
        wcaF NONE
         gmd NONE
         fcl NONE
         gmm 3636362 .. 3636374 -  -6.2  -2.58861   CAGTATTTTCATAAT                CCGG GTACT CCGG                CACGCTTCTCAGCGA  53 6
        wcaI NONE
        cpsB 3633654 .. 3633702 - -10.2  -3.30124   CCGTAGGTCGGATAA GGCGTTCACGCCGCATCCGACA AACAG CGCCTGATGCGACGTTTACACC CGTCCGTAGCGATCC  76 19
        cpsG 3632126 .. 3632154 -  -2.4  -3.14878   TGGGGTAAGGGAAGA        TCCGACATTACT CGTTC AGCAACGTCAGC        AGAGTTCGCGTTCGC  44 4
        wcaJ NONE
        wzxC 3629042 .. 3629084 - -14.8  -3.54951   GATCCGAGCACAGAA CCGTAGGCCGGATAAGGCGT TTT ACGCCGCATCCGGCATTCAG TGCCTGATGCTACGC 100 144
        wcaK NONE
        wcaL 3626148 .. 3626160 -  -5.5  -3.85698   GTTCTCCTCTATAAA                GCCTG CAG CAAGC                TGGCGAGTTCTCGAT  61 6
        wcaM NONE
        galF 3623571 .. 3623629 -  -3.6  -5.64274   GTACTTATAAAAAAA GACAACGGCAGTGA-GATTCAATGAGCAAA ACT TATGCT-A-TGAATCTTCACTGCCGTT-TT TAATTACTTACTGAC  95 64
        rfbB NONE
        rfbD 3621275 .. 3621299 -  -4.4  -2.52543   ATTCCTTTTAATTCA          TCTTGTTC CACCATCAC GAACAAGA          TGCAAAAACTATTAA  46 37
        rfbA NONE
        rfbC 3619352 .. 3619366 -  -2.9  -3.99775   ACTCAGCAATAATAA               TAGAA GGTTT TTCTA               AATCAATTATCTTTT  54 478
        cpsB 3614154 .. 3614190 -  -3.3  -2.52138   ATCCAGACGAAAACT    TATAATTATCATTTC TAATTCT GAAATAATTATTATA    TATTACTTTCGTCCA  42 28
        cpsG 3612712 .. 3612735 - -10.4  -2.63929   AAAATATATATTAAT          TAAGCCCTAA CTTG TCAGGGCTTA           TTCTTTATGACGTCA  70 30
HHJ42_RS17735 3611035 .. 3611048 -  -2.5  -2.73356   AAAGATCACATATCA               TTTAT AAAA ATAAA                GCTCGTTGCATAATT  41 65
        gndA 3609544 .. 3609566 - -11.2  -5.75945   ATTTGGCAAAAAAAA           GCCCGGTGCA ATA TACGCCGGGC           CTCAATTTTATTGTT 100 53
         ugd 3608148 .. 3608168 -  -8.3   -4.0865   GGTAACAAAAGACAA            TCAGGGC GTAAATA GCCCTGA            TAACAAGATGTTAGT  78 36
        wzzB 3607007 .. 3607032 - -14.7  -5.75945   ATCCGGCAAAAAAAA         CGGGCATGGTG TCAC CACCCTGCCCG          TTTCTCTTAAATGCA 100 49
        yefM NONE
        yoeB 3598834 .. 3598850 -  -8.1  -3.53184   TATCAAAACTGACAA              TTCATTC TAT GAATGAA              TCTGTTCAATAATGA  67 31
HHJ42_RS17660 NONE
HHJ42_RS17655 3596862 .. 3596888 -  -7.3  -5.26875   GTTTGAAGCAAAAAA         TAACCGACGCT AATTA AACGTCGGTTT         TTAGTCATTTTTTGA  91 111
        yoeI NONE
        plaP 3595285 .. 3595305 - -10.4  -5.63517   GTCTGAAACAAAAAA            GCCGGAGC GACAA ACTCCGGC            TTTTTGAGATTTACC 100 69
        dacD 3592369 .. 3592388 -  -3.6  -3.14564   TGACGCCTCCACTAA            TACTGTTT TTAT ATACAGTA             TAGTTGCAATATTAA  46 110
        sbmC 3591769 .. 3591791 -  -6.3  -2.91582   TATCCGACGGACATA           CCGGGAA CAGTGTAAT TTCCCGG           CAGGAGCGAAAAATT  55 115
HHJ42_RS17625 NONE
HHJ42_RS17620 3590082 .. 3590112 -   -17  -2.91042   GATAAGAATCAATGA       GCAATGAGGGTTGC CGG GCAACCCTCATTGA       ATAAAACAGGAATTA 100 38
        pduF 3575629 .. 3575641 -  -5.5   -4.9645   AGGACAATAACAAAA                GCCTC CGT GAAGC                GGGAGACTTTTTAAT  78 104
        pocR 3574283 .. 3574310 -  -4.8  -3.87815   TGGTAGGGGTATAAA        GACGCG-CCTGTA CTC TACCGGACGCTTC        CGGGCAACCCACTTC  61 318
HHJ42_RS17510 3573595 .. 3573605 -  -3.2  -3.97511   CATTGAACAGAACAA                 TGGA TCC CCCA                 CCGTTGCTGACCGCA  55 101
        cobU NONE
        cobS NONE
        cobT NONE
        ldtA 3570189 .. 3570199 -  -2.4  -4.19238   TTTTGAATGTCAAAA                 TCCG TTA CGGT                 TGATATTCACAGGCA  57 9
HHJ42_RS17485 3569001 .. 3569023 -  -7.6  -4.55128   ATCCTGAAATTAAAA           GGGCAGAATC AGC GGTACTGCCC           TTTCTTCACTGATAC  80 46
HHJ42_RS17460 3564886 .. 3564921 - -11.4  -3.32844   CCCCTCACCCCACAA    TGCTCATATGAGCATT AACA AATATTCATATGAGCA     GTTATAACACAACGA  83 305
HHJ42_RS17455 3564391 .. 3564404 -  -2.5  -4.05027   CACAAGCAACAAGAA               TATTA ATCA TAATA                AACTCCAGTTTTTAC  56 40
HHJ42_RS17450 NONE
HHJ42_RS17445 NONE
         rpe NONE
HHJ42_RS17435 NONE
HHJ42_RS17430 3560694 .. 3560711 - -11.3  -5.22039   GCCAAATTCAAAAAA             GCCTGCT TTCG AGCAGGC              TTTTTGCTTTCTAAT 100 55
         nac NONE
         cbl 3558286 .. 3558304 - -11.7  -4.12942   CCAAATTTCTGAAAA             GCCCGCT TTTAT AGCGGGC             TTTTTGCTATATCTG  93 32
        yeeO 3556451 .. 3556462 -  -4.4  -3.35278   TGAACTACAGAGGAA                TCGT GAGA ACGA                 GGCGAATATTAGCGA  52 113
HHJ42_RS17400 3556283 .. 3556311 - -15.4  -5.07011   CACAGAAATCAAAAA        CCCGGCCACTTT TTTAC AAAGTGACCGGG        TAAAAATAATTTTTA 100 88
        ybtP NONE
        ybtQ NONE
        ybtX NONE
        ybtS 3516695 .. 3516716 - -10.1  -2.90813   CACTCTGGCAAATTA           CCACCACCT CCAC AGGAGGTGG            TTCTATATAGACTTT  72 165
HHJ42_RS17280 3513861 .. 3513871 -    -4  -3.61517   ATCCGTTTGGAACAA                 TTGA AGT TCAA                 CTGTTTTGTCATCAG  53 236
HHJ42_RS17275 3512869 .. 3512879 -  -2.6  -4.30995   GCGTTCATAAAAGAA                 TTTT ATG AAAA                 AATAGAAGGGAGGTG  60 113
HHJ42_RS17270 3512485 .. 3512516 -  -2.3  -3.36862   TAGAATAATAAGATA     CCCTGAG-CGAACAG ATAT CTGTTCGACAC-GAG      ATCTTGTTTCTGTTT  45 41
HHJ42_RS17265 NONE
HHJ42_RS17260 3511765 .. 3511802 -  -4.2  -4.18674   TGGACAGACAAATAA   GATTTGTTATCAGCCCC AAGAA GGGGCCGAT-AGACATC   AGAACATATCAACAT  62 34
HHJ42_RS17255 NONE
HHJ42_RS17250 3510739 .. 3510749 -  -5.4  -3.17229   ATTGCAGCAGCAATA                 TCCA TAG TGGA                 AAAATGATAGTCACC  54 305
HHJ42_RS17225 3506185 .. 3506195 -  -5.4  -3.13773   GGTTATATTGAAAAT                 GAAG ATG CTTC                 TATTCAGATAAAAAT  54 459
HHJ42_RS17215 3504594 .. 3504606 -  -3.3  -3.05384   CCCTTTTTTATGCAA                CGCAC CAA GTGAG                TTACATTTTTATATT  45 41
HHJ42_RS17210 3501871 .. 3501886 -  -6.8  -4.77759   ACAATCCATTAAAAA              GAGGAC CGAA GCCCTC               TAATACCTTTATTCA  80 41
HHJ42_RS17205 3500276 .. 3500295 -    -5  -4.58395   TTTAGTCCTTAAAAA            GTCAACTT TGAT AAGTTGGC             TTTTTTTGTATCTTC  71 151
HHJ42_RS17195 3497545 .. 3497581 -  -4.6  -3.41209   AATAGAAATAACACA   GTTTTCCAC-TGATGAT GGTT ATCATCACGCAGATAAC    AGGTAGAAAAACAAG  52 144
HHJ42_RS17190 3496894 .. 3496907 -  -6.7  -4.07885   GACTGCGCCCCAAAA               GTTGG ACAC CCAAC                TGATTAAGGTGCATT  70 312
HHJ42_RS17165 NONE
HHJ42_RS17160 3494138 .. 3494179 - -11.2  -3.41988   TTTCAGGGAATAAGA TAATAAACCACCACCA CAATGCGGGT TGGTAGTGGTTTATTA  TTTATAGCTGCTAGC  83 40
HHJ42_RS17145 3490045 .. 3490060 -  -2.6  -3.59087   AAGAGCACGGCTAAA              CGATTT AGCA AAATCA               ATTATTCAATAGTAT  50 41
HHJ42_RS17135 NONE
HHJ42_RS17130 3487938 .. 3487957 - -10.8  -5.30155   GGATGAATTAAAAAA            GGCAAAGA TTTC TCTTTGCC             TTCCGGGAGATTTAA 100 288
HHJ42_RS17125 3487242 .. 3487263 - -10.9  -4.48713   TTTAGCAATAAGAAA           GAAAAGGGC CTGC GCCCTCTTC            ATTAAATAGACGTGA  93 27
        pilV 3485677 .. 3485710 -  -3.9  -4.54727   CTGTTGAAATCAAAA     TGCACAACACATTTA ATTC TTACTATGTCGTGCA      TTTTTGATTCAAATA  66 72
        hprR NONE
        hprS 3477651 .. 3477683 - -12.1  -2.67017   AAGCGCATAATCAAT      CGCAGCCACGT TAATACTCACG ACGTGGCTGCG      TTTTTTCACGGTTAA  79 65
HHJ42_RS17065 NONE
HHJ42_RS17060 3473388 .. 3473408 - -13.3  -3.15999   CCTGCATAGATTTAA            CCGGCCATC TGA GATGGCCGA            CAGGTTAACATAATT  91 63
         dcm NONE
         vsr NONE
HHJ42_RS17040 NONE
HHJ42_RS17035 3469212 .. 3469230 - -14.6  -2.62983   GGCATTGGGACACCA             GGCCGGAT GTG ATCCGGCC             TGGTGTTAATGATAC  89 45
        yedQ 3467176 .. 3467197 -  -2.9  -3.73647   GCGACCTATCAACAA           TTGTCAGGC AGAC GCCCAACCA            CACTTGGCCTGGGCG  53 213
        dsrB 3465658 .. 3465691 - -13.9  -3.04248   CAACATGCGCTAACA     CATTCTGACTGGTGG TTTC CCACCAGTCAGGCTG      AATAAGATTACTCTG  87 33
        fliE 3453652 .. 3453662 -  -2.4  -4.32067   GATGGCAGAAAACAA                 CCAG GAT CAGG                 TATCCATTTTAAACC  59 126
        emrE 3452984 .. 3452998 -  -7.8  -2.95896   TCATTATGCATAAAG               GCGCAA TGA TCGCGC               AAATGCAATCATAAT  61 113
        ybcL NONE
HHJ42_RS16925 3451471 .. 3451484 -  -2.3  -2.60079   TTAGCGCAGAAGTCA               CCGGA TTGT TCAGG                CTCCAATAGGTTGAG  39 100
HHJ42_RS16920 3451072 .. 3451107 - -14.2  -3.68529   ATCTGATTACTCAAA    GATATGTTGTGGGAGGC TTT GCCTCCC-CAACATATA    AGTGGCGCCCTCAAG 100 164
HHJ42_RS16895 3446621 .. 3446641 -   -14  -2.66272   GGTGATTTAAATTCA            TCCCCGGC GGCAA GCCGGGGA            GATTTCATTACGGCA  86 33
HHJ42_RS16870 3441096 .. 3441112 - -15.1  -5.60993   GCGGGCAGAAAAAAA              CCCCGCC GTT GGCGGGG              AAGCACGTTGCTGAC 100 199
        fliZ NONE
        tcyJ 3438724 .. 3438741 -  -8.4  -5.63517   CGCGTAAATAAAAAA             GGCGCT AGTGAA AGCGCC              CTTTTTTGTCATTAT 100 46
        dcyD NONE
        tcyL NONE
        yecC 3436193 .. 3436203 -  -8.2  -2.73441   TATCACGTTTGAAAT                 GGCG TCC CGCC                 CCGACTGGTGAATCG  60 61
        sdiA 3435227 .. 3435253 - -12.3  -4.70583   GTCAGTAATATAAAA         CCGGCTGAGAG CGTGC CTTTCAGCCGG         TTTTTGCATCTGGCA 100 59
        uvrY NONE
        uvrC NONE
        pgsA 3431443 .. 3431455 -  -4.1  -3.55203   AAAATTGCGCCGAAA                CGATC ACT GATCA                AGCAAATCTGCACGC  52 16
HHJ42_RS16805 3431193 .. 3431206 -  -2.3  -2.91264   CCTTTCAGCCAGACA               TCCGC TGCC GCCGA                TGTCTTTTAAACTGG  41 38
HHJ42_RS16800 NONE
HHJ42_RS16795 3430933 .. 3430946 -  -8.1  -5.64274   GCAGGCACAAAAAAA               CCACC CGAA GGTGG                TTTCACGACACTGCT 100 72
        yecA NONE
HHJ42_RS16780 3428318 .. 3428328 -  -6.8  -3.61988   TTATTGATAAATTAA                 GCCT GGC AGGC                 AAAAGTGGCGAAGGT  63 126
        azuC 3427028 .. 3427041 -  -8.1  -5.84432   CAGAACACAAAAAAA               CCTGC CGGA GCAGG                TTTTTTGTTATCGGA 100 33
HHJ42_RS16760 3426651 .. 3426678 - -13.5  -3.86822   GAAGTTTTTGAGAAA        CCGCTGCCTCA TTTTTT TGAAGCAGCGG         TTTTTTAATGGGATT 100 30
        araF NONE
        araG 3422739 .. 3422749 -  -2.4  -3.07816   TCCTTACTCAGGCAA                 CTGC CTG GCTG                 ACTTTAGGCATCGCA  42 7
        araH 3421666 .. 3421691 - -12.6  -3.81414   ATTTGCAACGAAGAA         CAGCCAACCG TTGTGG CGGCTGGCTG          TGGTGGGAAAAAACG 100 64
        otsB NONE
        otsA 3418995 .. 3419008 -  -2.3  -4.08692   CAACTGCTGGCAAAA               GCGGT ATCT ATCGC                CAGGCCAGTAAAGGG  56 381
        flhD NONE
        flhC 3417168 .. 3417191 - -12.5  -5.76949   TAGGGGCAAAAAAAA          GCAGCGGTA CATCGT TACCGCTGC           TGGAATGTTTCGCCA 100 52
        motA NONE
        motB NONE
        cheA NONE
        cheW 3412739 .. 3412759 -  -8.3  -5.67283   AATTGAAATAAAAAA            CCCGATG CGCAGAT CATCGGG            TTCATTTCAATTGAG 100 54
         tar 3410721 .. 3410744 -  -8.2  -2.66634   CACTTCAGGATACCA          CTGGCGCAATT TGT AACTGCGCC-G          ACTCATGTCGTGCTA  59 263
        cheR NONE
        cheB NONE
        cheY NONE
        cheZ 3407681 .. 3407710 - -11.5   -3.0644   ATCCAACCTTGAAGA       TCTGATGTGACGC GGCC ACGTCACATCAGG        CAATACAAATCAAAA  79 35
        flhB NONE
        flhA NONE
        flhe 3403866 .. 3403889 - -12.5  -3.07962   CGTTATACGGCAACA          GCCGATGTC ATTGCA GACATCGGC           TTTTTTATCATTAAC  83 36
HHJ42_RS16640 NONE
        cutC 3400500 .. 3400524 -   -10  -5.64274   TCAGGGATAAAAAAA          GGCCCCTG TTGAAATTG CAGGGGCC          TGGTACGAGCAAGCA 100 73
HHJ42_RS16630 3398638 .. 3398654 -  -4.3   -2.5474   CGCCAGCCATAAGAT              CCGGCAA AAA TGGCCGA              TGGTCCGTTAGCTTT  46 455
        aspS NONE
        nudB 3390335 .. 3390346 -    -3  -4.83615   GACCTGCCATAAAAA                TATC TCCA GATA                 GCCCTGCCTGTTCAG  68 37
HHJ42_RS16585 3389596 .. 3389606 -  -3.2  -2.94218   AGGCCTCATCAGAGA                 GTCG CTG CAAC                 CTCATCAGAGATTTC  44 8
        ruvC 3388699 .. 3388711 -  -3.4  -5.35721   ACAGAACAACAAAAA                CAAC GAATT GTTG                AACAGGTTCCTTCCC  85 347
HHJ42_RS16570 3388205 .. 3388224 -  -6.4  -5.67063   TGTATGATAAAAAAA            TGCTGGAT AGAT ATCCAGCG             AAGGATGAAGAAAAC 100 86
        ruvA NONE
        ruvB 3386470 .. 3386508 -  -6.6  -3.27771   CTGATAAGACGAACA   GCGTCGCATCAGGCAC ACTGCCA ATGTCGGATGCGGCGC   GAGCGACCAATCCGA  61 42
        znuA NONE
        mepM 3382455 .. 3382477 - -10.6  -5.68438   GCACCAAATAAAAAA           GCCGGTAC TGACTGC GTACCGGC           TGCGAATGGATGTTA 100 42
        lpxM 3381276 .. 3381314 - -11.7  -2.81725   ACGGTAGAGTAAGTA  CGTTG-CCGGATGCGGCG AAAA CGCCTCATCCGGCCTACA   GTTCAATGATAATTC  79 115
         zwf 3376915 .. 3376940 - -11.2  -5.80364   AGTGTAATAAAAAAA         GCCTCGTG-GG TGAAT CCGCACGAGGC         CTGAAAGTGTAAAAA 100 105
         edd NONE
        kdgA 3374266 .. 3374286 - -15.5  -4.90296   AAAACGCTACAAAAA            TGCCCGATC CTC GATCGGGCA            TTTTGACTTTTACAG 100 35
        yebG NONE
        yebF 3372167 .. 3372178 -  -3.6  -3.30124   TTGTAGGGCGGACAA                GGCA CTCG CGCC                 GTATCCGCCAACGGT  48 62
HHJ42_RS16490 3371223 .. 3371237 -  -7.8  -2.91582   CAGGCTATCCAGAGA               GCGGAA TTA CTCCGC               CAAAGTACGTTTTTG  61 17
        ptrB 3368604 .. 3368625 -  -4.4  -3.78953   ATTTGCACTATGAAA           CTGGCC CGTCGTTTGT GGCCAG            GGATCAAGTACAGCA  58 360
        yobA NONE
        copD NONE
HHJ42_RS16455 3365293 .. 3365319 -  -8.8  -4.16832   TAACAGATAAAAAGA         GACCGAACAC GATTCCT GTATTCGGTC         CAGGGAAATGGCTCT  80 252
        pphA 3364210 .. 3364226 -    -5  -4.44608   CTGATCCAAAAAGAA              CCCGTC GGCAT GGCGGG              TTATTTGTCCTGGTT  71 294
        msrC 3357765 .. 3357784 -  -6.4   -3.1552   GCGCAGGCATGAACA            GGCGTCAT TATA ATGACGCT             ATCAGTAAATGCTAC  57 53
        proQ NONE
         prc 3354919 .. 3354942 -   -14  -5.00616   GCCGCTGTTAAAAAA          TCAGGCACAA TTTC TTGTGCCTGA           TTGATATTACTTGAC 100 32
        htpX 3353836 .. 3353855 - -10.7    -5.626   CAGGGCATAAAAAAA            GCGCGTC GATCAG GACGCGC             TTTTTAGTATTTACT 100 46
        kdgR 3351449 .. 3351479 - -11.3  -4.44046   CTCATGCTAAATAAA       GAACCTGTCTG TTTGATATT CAGACAGGTTC       TTACTTTCCTCAGAA  93 35
        mgrB 3350802 .. 3350816 -  -2.8  -3.37655   GTGCTGAAAAAATGA               TATCAC CAC GGGATA               AACTGGTTAATGGCA  46 13
HHJ42_RS16380 3350397 .. 3350428 -  -9.6  -3.25729   TATAATCAGCATGAA      TTGAGTAAC-CCTTC AAC GACGGGGTTACTCAA      GATTGAGGAAGGATT  72 39
HHJ42_RS16375 NONE
        cspE 3349342 .. 3349360 -  -8.1   -5.1517   AAAACAAAGTAAAAA             GCCTCGC ATTCG ACGAGGC             TTTATAGCGAGATTG  87 74
        rlmA 3348165 .. 3348181 -  -7.9  -3.83155   GATGAAGATGAAGAA              CCGCGCC GTC GACACGG              TTTCTGGTTACTGGT  69 278
        yoaE 3342138 .. 3342172 - -14.9  -3.54424   CGTGATTTTCCCAAA     TGGCTGGCGGGCAGC CAACC GCCGCCCGCCCGGCA     TAATGGACATATCAC 100 66
HHJ42_RS16310 3336414 .. 3336432 -  -3.2  -3.17723   GTACGGCGAAGGGAA             TCTTTAAA TAT TTAAAAGA             ACTGGGAGTACCCGC  45 329
HHJ42_RS16295 NONE
        tsaB NONE
        yeaY 3332089 .. 3332113 - -14.4  -2.66106   TACCGTAAGAATGCA          GAAACAGCGG ACCGG CCGCTGTTTC          TTTTTCTTTAAAAAC  87 47
        fadD 3330208 .. 3330224 - -10.8  -5.75342   GGGCGTCAAAAAAAA              CGCCGG ATTAA CCGGCG              TCTGACGACTGACTT 100 46
         rnd 3328969 .. 3328980 -  -4.4  -3.96618   GTTAAGCTCAAATAA                GTTC ATTT GAAC                 CACCTGCTGTTGGAT  59 93
HHJ42_RS16270 3328612 .. 3328636 -  -3.5  -3.27994   TTAACTCGATATCAA          CCCGATAATTG AAT CATTAATCAGG          CATGCTCCAGTGAAA  48 21
        leuE NONE
        yeaR NONE
HHJ42_RS16255 3327159 .. 3327173 -    -5  -2.82529   GATAATTACCAACCA               CAAACA TCA TGTTCG               TTTTCCGTGTCATAA  49 1
HHJ42_RS16250 3326714 .. 3326739 - -13.4  -3.10444   ACATCTAAAAAATAG         CAAAGGCTGC CTGTGT GCAGCCTTTG          TGCAATTTACGCGTT  86 39
        yoaF 3324951 .. 3324975 -  -6.5   -5.1675   CTACTCAGCAAAAAA         CACCA-CGCA GAACCA TGCGCTGGTG          CTGGCAGACTGGCTA  86 74
        nimR NONE
HHJ42_RS16205 3321380 .. 3321394 -  -2.8  -3.44051   GCTTTATTATCACAA               GAAGGT GCT AACTTC               CGCGTCGTTACCCAT  49 455
        mipA 3312709 .. 3312725 - -10.1   -4.2803   CACCGTAATGCAAAA              CAGGGCA TTA CGCCCTG              TTTTTATGCACAAAA  85 61
        yeaE 3311747 .. 3311759 -  -7.7  -2.52543   ATCTGGCGCAATCCA                TTCGC GTT GCGAA                ACGTTAATTTGCGTT  59 83
        msrB NONE
HHJ42_RS16145 3308442 .. 3308475 - -12.7  -2.95341   AGGTCAACATCAAAT     CTGTAAAACACAGAT AATG ATCTGCGTTTTACAA      CTTAGATCACAATTA  82 284
HHJ42_RS16140 NONE
HHJ42_RS16135 NONE
HHJ42_RS16130 NONE
HHJ42_RS16125 NONE
HHJ42_RS16120 NONE
        ydjG NONE
HHJ42_RS16110 3301045 .. 3301066 - -10.9  -2.57863   AAAAAAGGTAGCAAT           TGCGGCAAA TTCA CTTGCCGCA            TCTTTATCATCATTT  74 87
HHJ42_RS16105 3299560 .. 3299607 - -10.2  -3.23984   GAAACGCAGGAGTAA TTTTACGCTGGCCTACAATTC TGTACTG GCATTGTAGGCCAG-ATAAAA CACATCAGTGATACA  74 70
HHJ42_RS16085 3294766 .. 3294782 -  -2.2   -3.5032   CGCCCATAGCAAAGA              TATCGC TGATG GCGTTA              GTCGCCGCAATGCGG  47 399
        topB 3291992 .. 3292026 - -19.6  -3.48036   GACGAGTATAACCAA     TAAAGCCAATGGCAGA ATA TCTACCATTGGCTTTA     TTTAAGAGTGGAAAA 100 45
HHJ42_RS16070 NONE
HHJ42_RS16065 3287996 .. 3288023 - -11.4  -3.41527   TAATCGTTATTACAA        TCGTCTGGTTTT CCTT ATAACCAGACGA         TTTTCCCTGAGTTAA  83 41
HHJ42_RS16055 3285890 .. 3285906 -  -9.4  -2.84051   CGAGCCGGATGAAAG              CCAGCG GCAGG CGCTGG              TGCGTGAGTTAAACG  65 251
HHJ42_RS16045 3285001 .. 3285016 -  -4.6  -5.09895   CAGCGATCCAAAAAA              TCCGGT AGCA ACCGGT               GAACGCGGCCCGGAC  81 61
        astC NONE
        astA NONE
        astD NONE
        astB NONE
        astE 3270195 .. 3270220 - -16.3   -3.2827   AAGAAAGCAACTTAA         TACCCGCAGAA TGAT TTCTGCGGGTA          AGTATTAGCTTATTT 100 30
         spy 3269336 .. 3269386 - -19.8  -5.26907   GAAGAGAAAAGAAAA CCGCCGATCCTGTCCACCGCATTA CTG CAAGGTAGTGGACAAGACCGGCGG TCTTACGTTTTTTGG 100 49
         ves 3268391 .. 3268405 -  -5.6  -2.50195   AGCCATGAGGAACAT               GCGCTA CGT TTGCGC               CAGTCTCTGGAACGT  47 252
        osmE 3266138 .. 3266153 -  -7.5  -5.79526   ACAGGCCAAAAAAAA              CCGGC GCAATG GCCGG               TTTCCGTTGTTACTC 100 60
        chbB 3265504 .. 3265523 -  -7.9  -4.62904   AAATACCCTTAAAAA            CCGCAAT TTAAAT ATTGCGG             TATTGATTTATGAAA  85 71
        chbC NONE
        chbA NONE
        chbR 3262833 .. 3262845 -  -3.3  -4.14627   CCCGGACATAAATAA                TCCAG CAA CAGGA                CAGATATGTGAATTG  57 55
        celF NONE
        chbG 3260605 .. 3260641 - -14.6  -3.34517   ATCCCGGCGTAAATA   TGGATAAGGTCACGCCC CCTC GGGAGTGACCTTA-CCA    CCTTACTTACACATC 100 32
        cedA 3257868 .. 3257888 -  -7.5  -3.60098   ATTTGTTACGTTAAA            CGCCTGTCA TCC CGACAGGTG            TTTTTTTATTCTTCG  67 31
HHJ42_RS15890 3254195 .. 3254211 - -10.8  -2.64099   TGGGTTGAGGATAAT              GGCCGC TCCGT GCGGCC              TTTTGATTAAATAAA  74 32
HHJ42_RS15870 3250811 .. 3250839 - -10.9  -4.62475   AGTGACAAACGAAAA        CAGCCAGACCGCA TAA CACGGTCCGGCAG        ATAATTTTACATGCT  95 32
        thrS NONE
        infC 3246443 .. 3246472 - -15.1  -3.72593   AACAAAGGCGAACAA       TGCCTGTGAAGCC CAAA GGCTCCACAGACA        GTGCTACTTGAAGGC 100 42
        rpmI 3246177 .. 3246191 -  -2.9  -4.87291   TATTCTAATTAAAAA               GTTAA AAACG TTAAC               GGCTTATGCGTACGG  68 29
        rplT 3245756 .. 3245774 - -10.3  -4.54727   GCGTTGAAACGAAAA             GAGGGAG ACTAG CTCCCTC             TTTCAACTGGCTTAT  89 37
        pheM 3245554 .. 3245569 - -10.4  -5.71712   GCGCATACAAAAAAA              GCCTCC ACTG GGAGGC               TTTCAGGCGCTGTTT 100 50
        pheS NONE
        pheT NONE
        ihfA 3241614 .. 3241628 - -12.8  -5.80951   AGTGAAAAGAAAAAA               GGCCGC AGA GCGGCC               TTTTTAGTTAGATCA 100 43
        btuC NONE
        btuE NONE
        btuD 3239194 .. 3239206 -  -2.7  -3.07895   CCGATTTTCAAGATA                CTAAT GAA ATCAG                ATGGTCGAAATCAGC  43 22
HHJ42_RS15800 3238622 .. 3238648 -   -21  -3.79747   GTATTCAGGAGTAAA         TGGACGGCGATG TAT CATCGCCGTCCA         TTTTTCGACATACTA 100 38
        ydiV 3237632 .. 3237644 -  -3.3  -3.55261   GGGTAATAAAAGACA                GGGTC ATA GATCC                TCCTGTTTGATAGTG  50 82
HHJ42_RS15790 3235691 .. 3235719 -  -3.9  -3.73402   ATATTTGTCAGCAAA       TCC-GCAATGGC TCTACG GCGATTGCTGGA        ATTATGGCGGAAAGT  56 508
        ppsA 3231097 .. 3231119 - -14.8  -4.08706   CGGGGATCACATAAA           CCCGGCGACA AAA CGCCGCCGGG           TATTTATTTTATTTC 100 34
HHJ42_RS15740 3224740 .. 3224787 -    -5  -4.36554   GATTATCAGAACAAA TAATCTGCAGGCGGCGCAGCTT CTTAAC AAACTGCGCCGCCAG-AT-TTA TCCGGCAAGACTTAC  68 23
HHJ42_RS15690 NONE
        menI 3211711 .. 3211742 - -12.4  -3.31726   CGCTTTTAGACAAGA      CCTGCACAGTATAC CACC GTTTACTGTGCAGA       TAATAACCAAAAGCA  90 70
HHJ42_RS15680 3211243 .. 3211273 -   -17  -5.05116   TCAGAAATAAGAAAA       CCCTTAAGTCTGTG CGA CACAGGCTTAAGGG       TTTCTACCCCATCCG 100 251
        sufA NONE
        sufB NONE
        sufC NONE
        sufD NONE
        sufS NONE
        sufE 3205387 .. 3205405 -  -3.9  -3.60627   GCAGGCCAGTGTAAA            CATTGACC ACCC GG-CAATG             TGAGCCAACCGGATG  53 58
        ldtE 3204243 .. 3204261 - -14.6  -4.74103   CTGTGAAGTGAAAAA             TGGCGCAC ATT GTGCGCCA             TTTTTTTTGCCTGCT 100 49
        fumD 3201463 .. 3201491 -   -14   -3.4945   ACTGAACTAACAATA        TCAGGATGAAGC TTACC GCCTCATCCTGA        ATGGTCATTTTACCA 100 30
HHJ42_RS15625 NONE
HHJ42_RS15620 NONE
HHJ42_RS15615 3197638 .. 3197654 -  -5.2  -3.54129   GACATCTCCCTGAAA              TTTCAG GGGTT CTGAAA              CTGCTCTACCTCGAA  56 11
HHJ42_RS15610 NONE
HHJ42_RS15605 NONE
HHJ42_RS15600 3195087 .. 3195104 -  -4.9   -4.6391   AACAATTACAGAAAA             CAGGGGAT GAA ATCCC-TG             ATGTTGGCGAAGATT  72 231
HHJ42_RS15575 3191401 .. 3191424 - -13.9  -3.86252   CGCTAGTAAAGACAA          GGCGCAACC TTCACG GGTTGCGCC           TGTGTTTTTACGCAG 100 33
        ribE 3189124 .. 3189138 -  -4.2  -3.53224   GAGTCGCTCGCTAAA               GGCTAT TCT ATCGCC               CCCTCTCCGGGGGCG  52 49
HHJ42_RS15550 3184930 .. 3184942 - -10.5  -3.06796   CGTTATCTGATTGAA                CGCGG TCA CCGCG                AAATCGGCGTTATCC  72 510
        ynhF 3183934 .. 3183968 -    -3  -4.96276   ACAAAAAAATGAAAA     TAACAAAAAGAGAAAA CAC TTTTGCCATTTTGCTA     ACAAACAGGAAGGAG  70 74
        grxD 3180286 .. 3180313 - -15.7  -3.09116   GGGATAGAGAAAGGA        CTGACGGATGC CCGTTC GCATCCGTCAG         TATTGCAGGACGGAT  93 40
HHJ42_RS15490 3176548 .. 3176561 -  -2.3  -4.46926   TAGCCCATCACAAAA               CGGGA AAAC TCCGG                GCCTTGCGGCGCAAT  61 107
        sodC 3174989 .. 3175012 - -10.2  -2.52516   CCCGTCATCATCAAC          CTGCCGCCCG AGAG CTGGCGGCAA           TTGTCTGGCGGCTGT  65 105
        slyA 3171298 .. 3171333 - -11.8  -3.90744   CCCCGCGCTAAATAA    GTTTGCGTGTGGTCAG GTTA CTGACCACACGCCCCC     TTCATTTCACCCTTT  93 32
        anmK 3169427 .. 3169440 -  -2.4  -3.63367   CGCGGTAAGAAAAAT               TCAG TTAACT CTGA                TATCACGGGTTAGCG  49 28
        mliC NONE
        pdxH 3168282 .. 3168294 -  -3.4  -3.77196   GTACCAGCGATTAAA                GCAA GATTT TTGC                ATCTTTTCAGGGTGC  53 32
        tyrS 3166857 .. 3166884 - -14.2  -3.49419   TCCCTGTATAAAAAC        CAGGGGGAGTGA TTTC TCACTCCCCCTT         TCCACTTAATGCATT 100 39
        pdxY 3165607 .. 3165617 -  -5.4  -4.36914   TTTCCCGCTATAAAA                 CCAT CGA ATGG                 CTGAATTACATCGCC  70 384
HHJ42_RS15365 3154282 .. 3154306 -   -10   -5.1963   GCGAAGTAACAAAAA          TGGATGGTGC TAATT GCACCATCCC          CTTTTCACGCAAGGC 100 30
        malI 3149115 .. 3149131 -  -5.1   -5.3104   TCAGTAAAAATAAAA              GGCAC CGCCTGT GTGCC              ACATTTTTTATCATT  82 87
        hdhA 3148159 .. 3148170 -  -5.8  -3.01924   CATTGCTGTTGAATA                GTGC GAAG GCAC                 ACTCAATTCGTAAGC  52 169
        uidR 3147453 .. 3147479 - -10.9  -3.87318   AATTACGATATGAAA        CGCGGGCTCAGT TGTC ACC-AGCCCGCG         GAAAGAGAGAGAGGA  86 41
        uidA NONE
        uidB NONE
        uidC 3142589 .. 3142612 - -13.9  -4.24606   AATTCACAGCCAAAA          CGCCGGAGA TTTTTC TCTCCGGCG           TTTTTTCTTACTTCA 100 33
        fumB 3137924 .. 3137939 - -11.8  -5.47218   TGCCATGTAAAAAAA              CCGCCC CGAA GGGCGG               CTCTGTTTATTTCAC 100 32
        fumC 3136310 .. 3136339 -  -4.3  -3.55444   TGGTGAGTTGTTAAA       TTACGATGCCG-AC AAT GTGCAGCACCGTTA       TAAACCACAGGCGCA  53 86
HHJ42_RS15280 3132827 .. 3132847 -  -8.3  -4.06419   CCTGGCGAGAAAGAA            GTGATCGAC CTG GTCGATTAC            TTACTTACCAGCTGC  77 88
        pntA NONE
        pntB 3126159 .. 3126184 - -13.3  -3.69068   CGATCTCAATAAAGA         GTGACGGCCTC CGCA GAGGCCGTCAG          GGTTACAGAGCTTTC 100 28
HHJ42_RS15245 3123840 .. 3123863 -  -2.6   -5.1287   CGCATACTGAAAAAA          CACGAAAAAAA TTA TTTTCTTC-TG          GCTACGGGTAGCGTG  73 13
HHJ42_RS15240 3123305 .. 3123315 -  -6.8  -3.40073   AGCGTGATTAATGAA                 CTGC CTT GCAG                 CTATCCTTCCAGGCC  61 7
HHJ42_RS15235 NONE
HHJ42_RS15230 NONE
HHJ42_RS15225 3121779 .. 3121789 -  -5.4  -2.72036   GAAATTGACAGATTA                 TGCA TGG TGCA                 CCTCCTGCACATCAG  50 12
HHJ42_RS15220 NONE
HHJ42_RS15215 NONE
HHJ42_RS15210 NONE
HHJ42_RS15205 NONE
HHJ42_RS15200 3118919 .. 3118931 -  -3.3  -5.14894   AAAAAATTATAAAAA                CGCGT CGC ACTCG                TCTGTTGTTATTGCG  74 4
HHJ42_RS15195 NONE
HHJ42_RS15190 NONE
HHJ42_RS15185 3117371 .. 3117400 -  -7.9  -5.60993   CTCGGCATAAAAAAA       GTCCTGGGGTT AAGTAAGG AACTCCAGGAC        GCGGCAAAAACTCAA 100 276
HHJ42_RS15180 3116171 .. 3116200 -  -9.3  -4.42386   TTTTCACCCATAAAA       CACTAAAGGGGCT TTTA AGCCCCTTCTGTA        TGCTGTTAATCGTCG  85 31
HHJ42_RS15175 NONE
HHJ42_RS15170 NONE
HHJ42_RS15165 NONE
HHJ42_RS15160 NONE
HHJ42_RS15155 NONE
HHJ42_RS15150 3113045 .. 3113055 -  -2.6  -2.62184   TTTTTCGTCAGATTA                 TTTT TCA AAAA                 ATTCCCGTGCATAAA  40 117
HHJ42_RS15145 NONE
HHJ42_RS15140 NONE
HHJ42_RS15135 3110372 .. 3110424 - -10.7  -3.64103   CACTGATACCCCAAA TTTGGGTATCACGAGTAAGCCCCAA AAT CTGGGTGTTACTCTTACTACCCAAA CTACGGGTAGTTTCC  83 329
        mdtJ NONE
        mdtI 3108742 .. 3108765 - -15.3  -3.65722   AAAATAATGTTCAAA          CGCTGCCCG ACAGCG CGGGCAGCG           TGTTCATCAGGCAAG 100 32
HHJ42_RS15095 NONE
         mlc 3103218 .. 3103238 -  -3.3  -3.16345   AACCAGGAAAATAAT            TAACCTTGA AAG TCTAAGTTA            TGCTTTCCTGGCCCA  46 82
        bioD 3102407 .. 3102431 - -15.8  -2.93585   TGATATGTGAAATGA          CCGGGGAGTA TCAGC TACTCCCCGG          TTTATTGATTGCCTG  95 69
HHJ42_RS15045 3092403 .. 3092425 -  -8.4  -2.89565   AATTTCAGATAATTA           TCTCCCCGGA GTA TCAGGGGAAA           GGTCTGGCAACCCGT  61 298
HHJ42_RS15030 3091197 .. 3091212 -  -4.6  -5.67063   GTGATCACAAAAAAA              GGCGTA TATT TGCGCC               GTGAATGGTTGACAA 100 111
        rspA NONE
HHJ42_RS15020 NONE
HHJ42_RS15015 3087390 .. 3087413 -  -9.6  -5.16841   TTATATGAATAAAAA          TCCCCTCTCC GGTA AGAGAAGGGA           TTGAGGATTTACAGA  93 34
         dcp 3081714 .. 3081741 -  -8.4  -3.44622   TACTGCTATAACGAA        GCTGGTCTGG CGATAAAT CCAGGCCAGC         CATTGGTGGTGTTTA  71 38
HHJ42_RS14985 3081459 .. 3081489 -  -2.6  -3.18768   TAGCATAACCCAATA      CTCTAATGGCCCA GTAGTT CAGGCCATCAG-G       CTAATTTATTTTTAT  45 37
        dgcZ 3080222 .. 3080239 - -10.5  -5.60993   CTGTGCACAAAAAAA             CCGCCAG TAAA CCGGCGG              TGAATGCTTGCATGG 100 143
        eamA 3076992 .. 3077032 -  -6.2  -4.36914   TTTCCCGCGATAAAA GCAGACGCACAGAGTGCTG GCAT CA-CATTCTGTGCGTATGG  TTTAGCCTCTGACCT  73 27
HHJ42_RS14950 3075348 .. 3075365 -    -7  -3.12351   CTTGCTCATAGCTAA             TCGCCA CATTCC TGGCGA              CCAGGAAAGCAATCA  58 441
HHJ42_RS14940 3073973 .. 3074000 -  -7.1  -3.18735   TTAAGAGTGTAGTAA        TTTCCTCCAGC TATCGC ACTGGAGAAAA         AATCAGGCATGGAGC  62 28
HHJ42_RS14935 3072286 .. 3072299 -  -2.3  -2.84192   TAGATTACCACCAGA               CTTCC GCCT GGATG                CCGGCCATAAACTCG  41 1
HHJ42_RS14930 3070514 .. 3070526 -  -7.7  -2.60688   CAACTAGTTGATAAC                GTGAC AAC GTCAC                TGAGGCAATCATGAA  59 311
        marC 3068772 .. 3068785 -  -9.5   -3.6707   ACGCAATAGTTGAAA               GGCCC ATTC GGGCC                TTTTTTAATGATACG  77 30
         sad NONE
        glsB NONE
HHJ42_RS14880 3063398 .. 3063410 -  -3.4  -3.48593   TATCTGTCCATACAA                TTGC GGGTG GCAA                TTATCTCAACGCAAT  50 132
HHJ42_RS14875 NONE
        uxaB 3060257 .. 3060272 - -10.4  -4.58585   TAGTGAAATAAGAAA              CCCGGT CGAA ACCGGG               TTCAGAGTATTAGCA  89 35
HHJ42_RS14865 3059013 .. 3059025 -  -2.6  -2.72344   CCGTACCGCCAAGGA                CCGG AAATG CCGA                AATGATGTCATAAAA  41 171
HHJ42_RS14850 3056666 .. 3056676 -  -2.4  -4.70169   TGACAGGCAATAAAA                 CCTG TTT CTGG                 TTTGCCGGATAAATT  64 521
HHJ42_RS14840 NONE
HHJ42_RS14835 NONE
HHJ42_RS14830 3052330 .. 3052348 -  -3.2  -4.45077   TAAAAAGGAGGAAAA             TAAAATCA AAT TGATGTTA             TTGCCAGGTATAGAT  64 23
HHJ42_RS14825 3051127 .. 3051142 -  -7.6  -3.72396   AACATGAATATATAA              GAGTAG GGGA CTACTC               TCTTACTATTTTTAC  68 255
HHJ42_RS14815 3048244 .. 3048260 -  -4.5  -4.08767   TTTATCTCCTTAAAA              CAATAAA GTT TTTATCG              ATACTTTTTTAACAT  61 69
        ydeO 3047397 .. 3047419 -  -8.4  -2.53831   CGCCTAAAAACAACG           CGGGGCAG GGAATGG CTGCCCCA           TTTAATTCTTACGCA  63 73
HHJ42_RS14805 3045351 .. 3045370 -   -15  -2.76815   ATCTCGCTCAATAAG            GCGGCGGA AAAA TCCGCCGC             ATGAAGGTTTAGTTA  89 38
HHJ42_RS14800 3044095 .. 3044120 - -10.5  -3.95424   ATGATGAAGACGAAA         CACCCGACA GGAATTTA TGTCGGGTG          CCTTGTTAAGGTCAT  86 79
HHJ42_RS14785 3041096 .. 3041125 - -15.1  -3.57387   AACAGACTTTGGAAA       TTGTCCCGAAACG GCTT CGTTTCGGGACAC        CGTTACCGTTAAACG 100 44
        gadC 3039405 .. 3039427 - -13.5  -4.83593   AACAAGCACGAAAAA           GGGAGCGAT GAATT ATCGCTCCC           TTGTCTTATAACCAT 100 51
HHJ42_RS14775 3037741 .. 3037751 -    -4  -4.70515   TATACTGAAAAGAAA                 TAAG CGA CTTA                 GGACAGTTTCAATCT  69 277
HHJ42_RS14770 NONE
        dosP 3035010 .. 3035023 -  -9.5  -5.28942   CACGTTAAATAAAAA               CCCGC GAGT GCGGG                CGAGAGGAATTTATC 100 39
         bdm 3033794 .. 3033805 -  -5.8  -3.32946   GTTTTAAGGACAACA                TCGC CGTA GCGA                 AGAAACACGTGCTAA  56 76
         sra 3033563 .. 3033584 - -13.1  -5.71295   AGATAAAAACAAAAA           CACCATTGC GCAG GCAATGGTG            TTTAATCGTCATTGA 100 58
        maeA 3031733 .. 3031756 - -14.6  -2.52138   AGGGAGAGGAAAATT          GCCCGGTAGC CTTC ACTACCGGGC           GCAGGCTTAGATGGA  89 32
        adhP 3030579 .. 3030592 -  -2.3  -4.57341   AAGCGTCTCGAAAAA               CAGGC TGCG ACCCG                AACATGGCAGTCGCA  61 52
HHJ42_RS14735 NONE
HHJ42_RS14730 3029668 .. 3029687 -  -6.4  -4.19238   GCTTTAAGCTGAAAA            TGGCGC TGTAAAAG GCGCCA             TTTTTTTATTGTAGA  70 209
        yddG 3023909 .. 3023931 -  -9.8   -3.1706   AATTTATCTGATTAA           CTGCCGGGCC GTA GACCCGACAA           TTATTTTAGCCACGA  72 31
        narU 3022189 .. 3022203 -  -6.4  -3.55447   TTACTCATGACATAA               CTCCTG CTC CAGGAA               TGAATTGGGATCTGA  60 98
        narZ NONE
        narH NONE
        narW NONE
        narI 3015452 .. 3015474 -  -6.2  -3.14132   CTGCGGTTTCATTAA           TGTTCTCCTG TGG CTGGAGAACT           ATCATAGCCTGCAAG  57 79
HHJ42_RS14680 3014490 .. 3014534 -  -9.5  -3.53811   CGGATGTGGCGTAAA CGCCTTATCCGGCCTACA TTAGTCCGGT TGTAGGCCTGATAAG-CG AAGCGCATCAGGCAA  75 46
HHJ42_RS14670 3012845 .. 3012855 -  -5.4  -3.58329   GAAACATTGCTTAAA                 CAAC TTG GTTG                 CTGCATATGATTCTT  59 40
        ansP 2997348 .. 2997372 - -10.7  -2.60392   CAGCGCGTAATGAAG          CCTACGTGACG CAT CGTCAGGCAGG          TAAAGTCAGTGTGAT  69 319
HHJ42_RS14580 2994117 .. 2994140 -  -8.8  -4.99645   AGCCGATAAATAAAA          TACGCCCGGC AAAT ACCGGGCTTA           AAGATAATTACTCAA  91 33
        mddA NONE
HHJ42_RS14565 2992296 .. 2992311 -  -7.6  -3.40403   TCTTTCTCACGATAA              GAAACG CATC CGTTTC               TTAAGCGCCTTTCTG  62 417
        yncL 2991723 .. 2991738 -    -4  -3.75153   TGCTGGTAAGTGAAA              TGCCGCA CGG TG-GGCA              GAAACTTTCTGGTTA  56 207
HHJ42_RS14510 2983932 .. 2983945 -  -2.3  -4.26589   ATCACATACTGAAAA               TGCCG TTAC CGGGA                AGCGTAGTGGCATCC  58 180
        ydcO 2979711 .. 2979735 -  -8.6   -3.6502   TATCCGGTACCGAAA          CCTTCTACCC AGGTA GGGCAGAAAG          TTCTGGATAAAATTT  69 464
HHJ42_RS14475 2976364 .. 2976392 - -18.3  -3.28791   ATGTCGGGTGGACAA        TGCGCAAAGCAAC CAG GTCGCTTTGCGCA        ATGGTTTTATCCTTG 100 115
HHJ42_RS14450 2971134 .. 2971155 -  -8.7  -3.76413   TGTGAAAATGTTAAA           GGAGGGATC GACA GATCCCTTC            ACCTTTCAGAACGGC  75 31
        hokB 2968473 .. 2968505 -  -4.9  -4.92385   GATATTTAAAGAAAA      CGCCTGTACTA AAACCGACCCG TGGTACAGGCG      AAGAATACGGGCCTA  77 465
         gap 2966705 .. 2966726 -   -13  -3.43853   GTAATGAGTGAAAGA           GGCGGAGG TTTTTT CCTCCGCC            TGTGCGCGTCAGAGT 100 34
        azoR 2958873 .. 2958885 -  -4.1  -2.94099   CGTTTCCACGACATA                TTCCG GCA CAGAA                TGCGGTTCTGGACGT  45 416
        ldhA 2941434 .. 2941456 - -10.5  -3.66018   GGATTATCTGAATAA           GCTCCCCAG GAATG CAGGGGAGC           GGGAAGATTAAACCA  78 33
        hslJ 2940572 .. 2940587 -  -4.6  -5.27769   ATAAAAAAGTAAAAA              TGCGGG GCAA CGCGCA               GGACAGCTCTCGACG  80 369
        nifJ 2936814 .. 2936833 - -11.4  -3.98944   CACAAAAGAAGACAA            GCCCGAAC AGTC GTCCGGGC             TTTTTTTTAGAATTG  91 62
        ompN 2935345 .. 2935363 - -10.2  -5.03945   GAATAAGCAGAAAAA             GCCCGCCA AAA CAGCGGGC             AGGGGGATTTAGAAC  93 34
        uspF 2934770 .. 2934789 - -10.7  -4.95957   GAAATGAATCAAAAA            GCCCGCA GCAATG TGCGGGC             GTTAGTGTCAGCGCA 100 33
        ttcA 2931502 .. 2931525 - -14.6  -2.80074   GCCTCCATAAGAGTA          GCCCGATACG CTTG CGCATCGGGC           GCTATCCTGGTTATT  89 36
        dgcM 2927074 .. 2927109 -  -8.3  -2.82516   TCGTTGATCACGAGA    CGCATCCGCG-GCT TATGCCGCC AGCACGCGGTTGCG    TCCATCATTTTTCGC  64 2
HHJ42_RS14275 2922903 .. 2922931 -  -6.7   -5.9003   AAATGAATAAAAAAA        TAGAGCCTGTCGA CAT CCACCAGACTCTA        CAGTACACACAGCAG 100 154
         ogt 2921967 .. 2921984 -  -8.5  -4.14739   CTATCTATTTGAAAA             CCCTTAA GTTG TTAAGGG              TGACTTTACATAAAA  78 73
         fnr 2921015 .. 2921063 - -14.2  -3.23638   TGAAACAGTGATGAA CCTTCTGTCAGATCAATAAATC AGAAA AATTTAATGATATGACAGAAGG ATAGTGAGTTATGCG  95 47
        uspE 2919942 .. 2919963 - -10.1  -5.30155   GCAGTAAGTAAAAAA           TAGGCCCGA TAAC TCGGGCCTT            GTCAGTTATTGAAGA 100 45
        ynaI 2918177 .. 2918199 -  -3.5  -3.63589   GAAAATACCGTTAAA          GCG-CGTAAT GCCG ATTACAACGC           GGCAGAAAAAATCCT  53 227
HHJ42_RS14230 NONE
HHJ42_RS14225 NONE
HHJ42_RS14220 2913690 .. 2913714 - -13.7  -4.22591   AATAAGTTTAATAAA          TCGTACTGCAC ATA GTACAGTACGA          TGGTAGCTATATAAT 100 45
        mpaA 2912384 .. 2912408 -  -4.1  -3.62597   GCGATGCTTGAACAA          CCGCTTCCTGC GCA GGACGATGCGG          CGCTGGAGAATTTTA  53 332
         tpx 2911107 .. 2911151 - -15.9   -3.4382   AAGAACGAAGAGTAA GCGTGAATATGCCTGATGGTG CAA CACCATCAGGCATATTAACTT ATGCTTTCAGTACAG 100 24
HHJ42_RS14185 2905770 .. 2905801 - -10.8  -2.74799   GATAATGTGCTAAAT      TGCCGGATGCGGGG CGAG CGCCAAATCCGGCA       TATATTTATTTCAAC  74 31
        pspF 2889498 .. 2889539 -   -11  -3.12668   TATTTTTATAGTTAA TGGCGCGGTGCATTACCCT CAGGC AGGATAATGCGCCACG-CA TTCTACTATTACGTT  76 327
HHJ42_RS14095 2889080 .. 2889095 -  -6.1  -2.89178   AGAAACCCATTAAAG              CACGC TGCTGT GCGTG               TCATTTTTAGCCGGA  55 99
        sapA NONE
        sapB NONE
        sapC NONE
        sapD NONE
        sapF 2883531 .. 2883566 - -15.6  -3.54779   ATCAAAAGTAATGAA    CACCTCATCCTGA-GGG GGG CCTGTCAGGATGAGGTG    CAAAACACTAACGGT 100 33
        fabI 2874722 .. 2874742 - -12.5  -3.71149   GTATAACAGAGATAA            CGGGCGGCA GAA CGCCGCCCA            ATATTTACCAACAGA  95 45
HHJ42_RS14035 2873061 .. 2873080 -  -4.9  -3.53012   GTCGCCTTCTTTAAA            CTCGTGG TTCAGG CCACGGG             CTGCGCGGCAAGGAA  56 435
        pdeR 2869169 .. 2869199 -  -2.7   -4.8143   TGAATAATGCAAAAA       TTGCCGCTAAA AGAGAAGTG TTTAACAGCAA       CGGCTAATTATCATC  68 96
HHJ42_RS14015 2868933 .. 2868973 -  -3.2  -4.49756   CCTCAAATAGGAAAA  CCTGAAGGCACGATTG TTAAATCTC CCACGGTGCCTTCGGG  ATGTCTGGCGTAGAT  64 1
HHJ42_RS14010 2867932 .. 2867945 -  -2.3  -3.54919   AATTATTCCGTGAAA               TCCGC TCGC GCGCA                GGGTTATATCACGCA  47 190
        osmB 2867506 .. 2867525 - -13.6   -5.0916   CGGCTAACATAAAAA            GCCACGGA TATA TCCGTGGC             TTTCGAATATTTTAC 100 123
        ribA 2862630 .. 2862640 -  -8.2  -3.82433   ATAAGCAGGAGCAAA                 CGCC GCT GGCG                 GTGATTGCCGGGAAA  72 470
HHJ42_RS13940 2854917 .. 2854936 - -10.7  -4.46775   GATGTAAAAGACAAA            CGCGAGG ATAAGA CCTCGCG             TTTTGCTTTAATCAA  93 33
HHJ42_RS13930 NONE
        cobO 2852263 .. 2852283 -    -9  -3.02166   CGGTTAATCAAAGTA            TGCCGGAC GTCAT ATCCGGCA            TTTTTACAGATTAGT  68 36
        trpL 2847507 .. 2847525 -  -8.8  -5.75342   TTTGTTCAAAAAAAA             GCCCGC TCATTAG GCGGGC             TGGGTATCTGATTGC 100 44
        trpE NONE
        trpD NONE
       trpCF NONE
        trpB NONE
        trpA 2840915 .. 2840935 - -12.6   -4.2704   TTTACCATCAATAAA            CCGCCAGA TGTTT TCTGGCGG            TTTGTCTCAAATTAA 100 37
HHJ42_RS13860 2839238 .. 2839255 -  -8.4  -5.44119   TTTAGCTGAAAAAAA             GGGAGC GCTCAG GCTCCC              CAATCGGAAGAAATC 100 119
HHJ42_RS13735 2815124 .. 2815135 -  -2.2  -4.93365   GGGGATAATCAAAAA                CGAT ACAC ACCG                 GGGTTTACCGCGTTA  69 105
HHJ42_RS13525 2794087 .. 2794102 -  -6.1    -5.626   TATGGCACAAAAAAA              CCGAC TAAGAC GTCGG               TTTTTTTGTTGTGGA 100 59
HHJ42_RS13520 2793679 .. 2793694 -  -3.2  -2.73875   CCTTCGGCAAGACCA              TCGAAG TATT CTTCGT               AAGCCTTTTCCATGA  43 58
HHJ42_RS13515 NONE
HHJ42_RS13510 2792766 .. 2792776 -    -4  -4.18762   AATGTCGACTGAAAA                 TGAT GAA ATCA                 TTAACTCCCTGATAC  62 254
HHJ42_RS13500 2791986 .. 2792011 -  -2.7  -3.81022   AAACTGTCAGAACAA         GTGCA-AATG CTGTATT CATTGTGCAC         ATCCTTTTTGTATCG  52 15
HHJ42_RS13495 2791327 .. 2791338 -  -2.2  -3.61398   CCTGTGCGCTAATAA                CCAT ATCA ACGG                 TGATGTTTTCACATG  49 500
HHJ42_RS13485 NONE
HHJ42_RS13480 2787820 .. 2787838 - -11.8  -4.08064   AACCCCTCTGCAAAA             CTGGTCAT CAA ATGACCAG             TTTTTTCCATTCCTT  93 14
HHJ42_RS13465 NONE
HHJ42_RS13460 2785388 .. 2785422 - -10.8  -4.22948   AAAACCGACTTAAAA     GGAAAATCACAGGCGC GAT GCTACTATGATTTTCC     TGAGGAGAACAGAGG  88 78
        yciA 2784939 .. 2784968 - -13.7  -4.08144   TTCAGTAAGCATAAA       GTCAAAAGCCTCC GATC GGAGGCTTTTGAT        TATTACTCAACGGGT 100 28
HHJ42_RS13445 2783654 .. 2783672 -  -8.9   -4.1023   AAGGCCAAACAAGAA             CACGGTT GCAAA AACCGTG             CCCTTAAATATTGAA  80 48
         kch 2782093 .. 2782115 -   -12  -2.67958   CAATATCTAAATGTA           CTGGGCACCA TTG CGGTGCCCAA           TAAGTTTACTCTTCC  79 52
         cls NONE
HHJ42_RS13425 2779897 .. 2779929 - -14.4  -4.08216   CGATCCGCTTTAAAA     GCAATAAGGGCTGAC AGTT GTCAGCCCTTATT-C      ACGTCAAAAGCGATT 100 43
HHJ42_RS13395 2773587 .. 2773604 -  -8.4  -4.05788   TCCTTTCAAATGAAA             CGGAGC TGCCAT GCTCCG              TTTACTTCGTCATTA  78 149
        adhE 2769653 .. 2769678 - -13.4  -5.67967   ATGAGCATAAAAAAA         TCCGGAAACG AGTGAG CGTTTCCGGA          TTCTTACACAGCCAC 100 118
         hns 2766635 .. 2766651 - -13.7  -5.55769   CCGGACAATAAAAAA              TCCCGCC GAT GGCGGGA              TTTTTAGCATGTGCA 100 53
HHJ42_RS13350 NONE
        purU 2761960 .. 2761973 -  -3.9  -4.00042   CTGGCGATTAAAGAA               TAATC GTCC GATTA                CCGTAAACAAAGACG  57 4
HHJ42_RS13340 NONE
HHJ42_RS13335 NONE
HHJ42_RS13330 2761106 .. 2761119 -  -8.1  -2.73124   CGGTATTTGTGAAAT               GGTGC TAAA GCACC                GCGGAAAAATTCTGA  60 318
        narX NONE
        narL 2748586 .. 2748629 -  -3.8  -3.65812   GGTGGTGGAAGATAA CCAGGGGCAGCGTG-TCTCCT CCA ATGAGATCACGCTAACGCTTG TCGAACCGTTCGACG  53 76
        ychN 2746308 .. 2746331 -    -6  -2.64144   CTTGCACTGAAAGAG          GGCGGACGC ACCACAG GCGT-CGCC          TATCGACTGCCAGAA  50 441
        chaA 2744225 .. 2744253 - -11.1  -2.67209   CAGGAATTTATATTA        TCTCCCCCGAT TTCCGTC ATCGGAGGAGA        TATAACTGTCAGGCA  74 34
HHJ42_RS13260 2743674 .. 2743699 - -13.3  -5.36441   GCCGGATACAAAAAA         GGCCGCAGG CTGTTACC CCTGCGGCC          GGTTTCGGGCGCATA 100 75
        lolB NONE
        ispE 2736574 .. 2736588 -   -10  -3.62522   CAACGTCTGGAACAA               GGTGAC GTT GTCACC               GAAACTCAGCTTGCC  78 45
         prs 2735478 .. 2735491 -  -9.5  -5.76633   TTACAGACAAAAAAA               CCCGC CGCA GCGGG                TCTTTGAGCCGGGTT 100 44
        dauA 2733388 .. 2733409 -  -3.7  -3.48629   ATGAAACGCAAAAAC           GCTTCGTTAC TCG GTAACGT-GC           TCATGGGGTTGGGTC  51 322
         pth 2732424 .. 2732447 -    -9  -2.80499   TAATATCTTAATAAT          CAACCTGTTA TTGC TAACAGATTG           CAGAAATGGAAATAA  66 89
        ychF 2731245 .. 2731271 - -11.7  -5.03715   AGCAGGCGTAAAAAA         GCCATTACGTG CAACT CACATAATGGC         TCGTTATTAACCGCC 100 57
HHJ42_RS13190 2730526 .. 2730539 -  -2.3  -4.58395   CGCAGCCTTGAAAAA               CGCTT CTCT ACGCG                GCTGAAAATTGATGA  63 423
        dhaK NONE
        dhaL NONE
        dhaM 2725572 .. 2725603 -  -9.6  -2.90078   CAGTGCAGAGTAAAT      TGCCGGATGACATCA GAA TGATGCCATCCGA-A      CGGTGGTTTAACCCT  70 33
        treA 2723544 .. 2723580 -  -6.7  -4.24342   TTCGTGATGAAGAAA    GAGCAATGCCAAT TTTATGCACGT AATGGCATTGCTC    GATATACAGTAAAGT  72 40
HHJ42_RS13155 NONE
HHJ42_RS13150 2721255 .. 2721266 -  -2.2  -3.91911   CGGACGGCAAGCAAA                GTCA CTGG CGAC                 CTCCGCGTAACAACA  53 15
HHJ42_RS13145 NONE
HHJ42_RS13140 2719683 .. 2719698 -  -6.1  -2.53268   AGAAAGGAAAATCAT              CGCAG TGTCTC CTGCG               GTACGCTATCCCACC  53 6
HHJ42_RS13135 2718837 .. 2718853 -  -3.6  -3.39165   AAAGAATTAAATAGA              GGCTGC GGGTT GCAGAC              TGACTTTAATGTCAG  48 0
HHJ42_RS13130 2716795 .. 2716824 - -12.9  -2.59668   TAAGATTTTCATAAG       GCGGATAGCGATA CAGA TGCCGCTATCCGC        TTTCACATCAGAACG  84 33
HHJ42_RS13120 2715115 .. 2715125 -  -4.6  -4.02253   CCAATAAGCCAGAAA                 GCCG GTG CAGC                 CTGGGGCGTCGATCC  62 493
        ldcA 2713910 .. 2713931 -  -2.2  -4.03234   TGTCTCTTATATAAA           CCCTACCA TATTAG CGGCAGAG            ACAGCGTTTTACTTA  55 60
HHJ42_RS13105 2711687 .. 2711701 -  -7.1  -3.05343   GTGATATCGCCAATA               CCGGA TTACG TCCGG               TGATGACGCTAAGCA  56 459
HHJ42_RS13090 2707813 .. 2707834 - -14.5  -3.23975   ATCCGGCAAAAATGA           GTCCTCCTC AAAC GAGGAGGAC            TATTTACAGATTTCC  95 29
        dsbB 2704490 .. 2704507 - -12.7  -4.72986   TAGCGGCAGGAAAAA             GCGCTCC CGCA GGAGCGC              CGAATGGATTAGCGA 100 34
HHJ42_RS13060 2701733 .. 2701746 -  -2.4  -2.72379   TCAATGTCGGAACTA               CGAA CGTCGT TTCG                AGTTTGAACCCGACT  39 477
HHJ42_RS13035 NONE
        minC 2696905 .. 2696925 -  -3.3  -3.29973   TTAAAAAGGGATCAA            TTTAACGGT TGA ACGGTCAAA            GCGTTTTCGACTAAC  48 1
        minD 2696064 .. 2696080 -  -3.7  -3.37464   CGAGTAATGCCATAA              CTTATCC TCC GAACAAG              CGTTTGAGGAAGCCT  50 10
        minE 2695743 .. 2695770 -   -15   -4.0371   TATTGTGCACAGAAA        CTCAAGGCAGAG ATGA CTCTGCCTTGAA         GATAAATGCGCTTTT 100 50
HHJ42_RS13010 NONE
HHJ42_RS13005 NONE
HHJ42_RS13000 2694749 .. 2694771 - -14.9  -5.08824   CCGTTAGCTAAAAAA           CCGCGTCGA ATTCA TCGACGCGG           TAACATATGAAATAT 100 40
        bluF 2688602 .. 2688637 -  -9.3  -3.70109   TACACGACCCAATAA    TACTTTGTACAATAT ACGCTA AAATTGTACAAAGTA     TAAATAAGATTTCAG  75 144
        bluR 2687590 .. 2687603 -  -6.7  -3.17725   TTTGAAAAACAACGA               CCTGA TCCA TCAGG                ATAATAACCTCTTGT  59 242
HHJ42_RS12945 NONE
HHJ42_RS12940 2686959 .. 2686977 - -12.4  -3.56837   TGTTAAATATTATAA             CGGGCGTA TAA CACGCCCG             TTGTTTTTATAAATA  93 65
        sitA 2684862 .. 2684872 -  -3.2  -2.72344   TGGTACTGTGAAGGA                 TGCA TCG CGCA                 GTGCTGTGTGCCCGT  43 92
        sitC NONE
        sitD 2681983 .. 2681994 -  -2.2  -3.57144   TCGTGGAGCTGGAAA                CACCG CTT CGG-G                AATGGAGCTGAAAGG  49 434
        ompC 2673977 .. 2673994 - -12.7  -3.46174   AAAGTTATTAAAAAT             GGGGCGT GGAA ACGCCCC              CAAAATAAAGGGTAA  93 164
HHJ42_RS12845 2670554 .. 2670576 -    -9  -3.45634   GTTAACAAAATTGAA           TGGGGAGGGC TTA GCCCTCCCTC           TTTTTACAGGTTAGC  73 29
        rluE NONE
        nudJ 2654397 .. 2654432 -    -4  -3.14647   ACTCACGACATTGAA    CTTCAAGGCGGCGT-AT TCT ATCACGCAGCCTTTTAG    ATGACACCCTTTGTA  48 22
        mnmA 2653075 .. 2653094 -  -5.7  -4.59773   CGCTACCGCCAAAAA            CCGCCAGC GTTGA GCTGG-GG            TTCATATCGATAATA  74 200
        purB 2651180 .. 2651209 - -12.9  -2.81326   GATAATCTTAATAAG       CAG-GCCGGACAGC ATC GCCATCCGGCACTG       TTTTGAGGCTTATTT  85 35
        phoP NONE
        phoQ NONE
        roxA 2647680 .. 2647706 - -15.2  -4.32201   GGAAGTAAGCGAAAA         GGGATGCGGCAT GTG ATGCCGCATCCG         GCTTAAATCCAAACT 100 40
        potA NONE
        potB 2643716 .. 2643728 -  -7.7  -3.58533   TTACAAGGGGTTAAA                TGCTG CCG CAGCA                TAGCGATATTGAAAT  66 510
HHJ42_RS12585 2619089 .. 2619111 - -12.8  -3.70853   GGAATGATGGAAGAA           GGCGTTGTAT GCC ACACAACGCC           TCACTGTTCATTTCT  95 33
        iraM 2612385 .. 2612399 -  -8.5  -2.54896   CTGGTACTGAATTCA               CCGGG AGGCA CCCGG               CACCATGCAATGGCA  63 112
HHJ42_RS12445 2603447 .. 2603458 -    -3  -3.46081   GAGGGAATGAATGAA                GTTT AGAA AAAC                 GAACTTTTCAGGTCA  48 126
HHJ42_RS12440 2603024 .. 2603048 -  -2.7  -2.71791   AGCGCCTGTTTAAAT          TCGTTGAAGCT GTG AGCTTCTTCGC          CTTCGGCAAGGCCTT  41 88
HHJ42_RS12435 2602451 .. 2602468 -  -6.9  -3.36492   TGGTCAACCTGACAA             CCCGGTG TCCT CAACGGG              GGAAGGAATAACCCC  61 290
        dicB NONE
HHJ42_RS12420 2601466 .. 2601477 -  -7.2  -3.48292   ATTCAGTATCAAACA                CGCC TTCT GGCG                 GAAGGTCGTCAACAA  65 336
HHJ42_RS12405 NONE
HHJ42_RS12400 2597758 .. 2597770 -  -2.7   -3.0579   AAATCTCTCCAAAAC                GTTTC CCC AAAAC                TAGGCCACGCATTTT  43 89
        potC NONE
        potD 2595799 .. 2595820 - -10.1  -5.63517   TTGCTAAATAAAAAA           CGGGCGGTA ATAC CACCGCCCA            CTTGCTGAATTAACG 100 35
HHJ42_RS12385 NONE
HHJ42_RS12380 2594477 .. 2594488 -  -7.2  -3.28712   TTGTGGGCCGGATAA                GGCG TTCG CGCC                 GCATCCGGCATAATA  63 63
HHJ42_RS12350 2588118 .. 2588135 - -12.7  -3.30701   GTTTAGCAAATTGAA             TCGCCCC GGCT GGGGCGA              TGGCTTAGCGGGAGT  90 30
         mfd 2584529 .. 2584565 -  -4.4  -3.39429   AAGAATTTGTAAATA   TTGCAGAT-GGGGGCGC AGAA ACGCCCCCGATTTACCA    TTAAGCGATCGCGTT  52 26
        ldtC 2583380 .. 2583399 -  -5.8  -4.11304   GTAATTTATAAATAA            GCATTAAC CCTC ATTAATGC             CTGCTACTGCTGATT  65 87
        comR 2581793 .. 2581816 -    -3  -4.17491   AGGAAACGGTTAAAA          CACCGCGTCA GGAG TGTCGCAACG           TTACAGTGACCCATC  60 458
        fhuE 2573358 .. 2573375 - -12.7  -3.25823   CGTTGGGGAGACTAA             GGCAGCC AGAT GGCTGCC              TTTTTTACAGGTGTT  86 43
        yceF 2559954 .. 2560001 - -11.8  -2.64194   TATAAACCTGATAAT GGGCGGTTGGCCTGATAAGGCG TTTA CGCCGCATCAGGCCGCCAGCAC CGATTGCCGGATGCG  79 66
         rne 2555173 .. 2555192 - -11.4  -5.69793   AGATGAAATAAAAAA            GCCCTGGC AGTT ACCAGGGC             TTGATTACTTGAGCT 100 46
        flgA NONE
        flgM NONE
        flgN 2543417 .. 2543441 - -15.7  -3.00298   CGGTGTAACGATACA          TTCCGGCCTGC AGT GCAGGCCGGAG          TTAATCTTCAGATCG  93 33
        mdtH NONE
        grxB 2537400 .. 2537431 - -12.2  -4.55016   AGAAAAAACTGAAAA      CGGCGGCAACCCGC GAAT ACAGGCTGCCGCGG       CGGGTCAGGATTAAA 100 36
HHJ42_RS12095 2536726 .. 2536741 - -11.8  -4.91852   TGCACGAAAAATAAA              GGGCGC GAAT GCGCCC               TCGTGATTAATCCGT 100 32
        pyrC NONE
        dinI 2535240 .. 2535255 - -11.8  -5.85244   AAGTAAAATAAAAAA              GCCGGG GCGA CCCGGC               AAAAACAAAAATCAC 100 47
        bssS 2534692 .. 2534708 -  -9.4  -3.74347   CCCAGAAATGGTAAA              GGCACC GGTGA GGTGCC              TTTTGGGTGGATGGT  79 50
        solA 2533471 .. 2533490 - -10.7  -4.57837   ATACTCCTGTAAAAA            CGGCCTC ATTCTG GAGGCCG             TAATGATGATTATTG  93 35
HHJ42_RS12070 NONE
HHJ42_RS12065 NONE
HHJ42_RS12060 2531898 .. 2531922 - -14.4   -2.9735   ACAGAATAAATATCA          TTGCCGGATG CGTGC CATCCGGCAA          CATTTCACTCTTACT  89 36
        lpxL 2529587 .. 2529610 -  -7.4  -2.83233   TAAGCACACTAATTA          TGCGCCCGACT TCC AGG-GGGCGCA          ATCCAGAGAGCTTTT  58 109
        mdtG 2528258 .. 2528300 -  -4.3  -3.11281   TCAGGGAAAAGGATA GCTGATTCTCCGCTTTTGCA AGTA TG-AAAGGCGAAAAATCAGT TCGATATCTGGGGGA  49 21
HHJ42_RS12040 2527570 .. 2527588 - -10.3  -5.11063   ACGAGCCAATAAAAA             TACCGGC GTTAT GCCGGTA             TTTTTTACGGAAGAG  93 276
        mdoC 2521735 .. 2521765 - -11.8  -5.03715   ATTATTCTCAAAAAA       GAACCCGCCACCAG TTT CTGGAAGCGGGTTA       TGGTCAAACTGGCGT 100 77
        csgD NONE
        csgE 2516141 .. 2516159 -  -3.8  -2.87243   GCATGAGTAGAACTA             CTGCATGT TTG ACACGCAT             TGCAGCCTCCGAACA  46 50
        csgF NONE
        csgG 2514810 .. 2514836 -  -9.5  -5.01811   GCAGCAAATCAAAAA         TAAAGCGTGAG GGGCA CTCACGCTTTC         GCTTAAACCGTAAAA  93 72
HHJ42_RS11945 2511563 .. 2511582 -   -10  -5.92337   ATATACGAAAAAAAA            GCCCGTAC TTTC GTACGAGC             TCTTCTTTAAATATG 100 39
        pgaA NONE
        pgaB NONE
        pgaC NONE
        pgaD 2503255 .. 2503288 - -13.3  -2.84504   ATTCGGTAAAGAGGA     TTGCGTACGTTCGGCA CTT TGCC-AACGTACGCTA     CATGCATACAGTTAA  86 90
        putA 2492448 .. 2492475 - -15.6  -2.63089   GACCACGTTAAAGAT        GCCGGAGGAGGT TGTA ACATCCTCCGGC         TACCTGTTTAACCGA  93 33
        rutA NONE
        rutB NONE
        rutC NONE
        rutD NONE
HHJ42_RS11855 2487934 .. 2487947 -  -2.3  -3.28712   GTTTGCTCCTTACAA               CAGCC CGCA GGCTT                CTTCAAAGGACAGAC  45 6
        rutF NONE
        rutG 2485700 .. 2485715 - -11.8  -3.82665   CAGGATATTACCAAA              CGCGGG TCTG CCCGCG               TCAGTTCACTAAGCT  93 384
        wrbA 2484852 .. 2484869 -  -4.1  -2.73875   TCCTGTTGAAGATTA             GCCGTTA AGTT TAACTGC              CAGACCTGCGACATA  45 5
HHJ42_RS11830 2484571 .. 2484593 - -16.3  -4.84673   TGAAATAACAGAAAA           CTCCCCCGC GTGAA GCGGGGGAG           TCGCTGGTTAAACGT 100 33
        cbpA NONE
        cbpM 2481485 .. 2481534 - -11.5  -3.14931   CGGATGCGGCATGAA CGCCTTATCCGGCCTAC-GGGAAC AGT GCTCTTTGTAGGCCTGATAAGACG CGTTAAGCGTCGCAT  81 53
        torR 2475699 .. 2475729 -  -8.2   -3.7456   ATAACGATATTGAAA       TCCAGCGTAACCTG TTG CAGGAGATGCTGGA       ACGCCATCCAGAAAT  72 365
        torS 2472205 .. 2472219 -  -2.8  -2.58418   GTTGCATACAAAATG               CCACTA TTC TAGTTG               TTCTTAACTGGCTGA  40 59
HHJ42_RS11780 2470686 .. 2470702 -  -9.4  -2.95962   CACAAAATAATATCA              GGCTCC CTCGT GGAGCC              TTTTTTATATCTGCC  70 420
        cspH 2469745 .. 2469762 -  -8.4  -3.36581   CAAATCGCGAATGAA             GCACGC ATACCA GCGTGC              GCTCTCCATCAAGAC  69 34
HHJ42_RS11700 2459446 .. 2459468 - -13.5  -5.48213   CAGGCAAAAGAAAAA           GGGGTTAGC AGTTA GCTAACCCC           TTATCTTATTTGGCG 100 36
        yccA 2458571 .. 2458589 -  -9.5  -5.20735   GTAACAAAAAACAAA             GCCCCGC ATAAA GCGAGGC             TCGGTAAGTAACCTT 100 49
        tusE NONE
        rlmI 2456594 .. 2456618 -  -2.2  -2.71924   CACCTCCCGGGAAAT          CTTTACCTTT GATAT AAGGGTAAAA          TTCCACATTTCAAGT  40 40
        hspQ 2456218 .. 2456245 - -17.8  -5.63517   TGGCCAAATAAAAAA        TCCCCGGAAGGC AAAA ACCTTCCGGGGA         TTTGTTCAGGGATTA 100 38
HHJ42_RS11665 2454942 .. 2454955 -  -8.1   -4.7889   AGAAAGACCGAAAAA               GCCTG CGCA CAGGC                ACAAAAATCTCAGGA  86 35
        mgsA 2454384 .. 2454403 - -13.6  -4.24711   GAAAACCGTAAGAAA            CAGGTGGC GTTT GCCACCTG             TGCAATATTACTTCA 100 33
HHJ42_RS11650 NONE
        yccS 2449595 .. 2449607 -  -7.7  -3.57144   TCTCTTACGCCGAAA                CAGGA GTT TCCTG                CGGAACTTGAGTAAT  69 2
        sulA 2447946 .. 2447961 -  -6.2  -3.19851   AAAATACGCCATGAA              TATCTC CAAC GAGATA               ACACGGTTAAATCCT  57 328
        ompA 2446832 .. 2446847 - -11.8  -6.40073   AAGGCAAAAAAAAAA              CCCCGC AGCT GCGGGG               TTTTTCTACCAGACG 100 46
HHJ42_RS11620 2444387 .. 2444401 -  -5.7  -2.77895   TGTACGCTGAACAAG               TCCGA TCAGT TCGGA               ATAAACCAGTTCAGC  50 16
        fabA 2443753 .. 2443777 - -18.7  -4.56597   CTGTCTCTTTAAAAA          GAAACCTCCGC ATT GCGGAGGTTTC          GCCTTTATATACTCT 100 53
        ycbX 2433996 .. 2434016 -  -4.7  -3.23216   TGGTATTACGATGAA            GAGCACGAT CGA ATGATGCTC            GATTTAGCCAATGGT  49 499
        ssuE NONE
        ssuA NONE
        ssuD NONE
        ssuC NONE
        ssuB 2428179 .. 2428235 - -17.4  -3.30124   TTGTAGGCTGGATAA GGCGTTCA-CGCCGCATCAGGCAGTCG TGCC CAACTGCCTGATGCGACGCTTGACGCG TCTTATCAGGCCTAC 100 84
        pncB 2423993 .. 2424010 -  -9.1  -5.58209   TTAAAGGTAAAAAAA             GGGAGCC GATT AGCTCCC              TGATGATATTAACTG 100 34
        asnS 2422416 .. 2422435 - -13.6  -5.75599   GAAAGGATAAAAAAA            GAGCCAGC GGGC GCTGGCTC             TTGAAGACGCTAAAT 100 40
        ompF 2420714 .. 2420729 -    -9  -5.97575   AAGGCATAAAAAAAA              CAGGAC CAAA GTCCTG               TTTTTTCGGCATTTA 100 57
        aspC 2419351 .. 2419368 - -12.7  -5.61596   AGGCGCATAAAAAAA             GCCCGCT TTCA AGCGGGC              TTCATCGGTTTTAAC 100 43
        elyC 2407411 .. 2407426 -    -4  -3.58343   CGTAGCATGCTGAAA              GATTCGC GCA GCGA-TC              AGTTACTGGCGATGG  53 259
        focA 2388601 .. 2388618 -    -2   -3.1247   AGCTCGGACATGTAA             CACCTA CCTTCT TAAGTG              GATTTTTTATTTACT  42 58
        pflB 2386252 .. 2386271 - -11.4  -5.00616   TCTCGTGCTAAAAAA            GGCCCCAC TTTC GTGGAGCC             TTTATTGTACGCTTT 100 68
        pflA 2385346 .. 2385369 -  -7.4  -5.24129   TCTGTGCACAAAAAA          GCGGTAACTC AATA AAGTTGCCGC           TTTACGGGGAAATTA  91 38
HHJ42_RS11380 2383172 .. 2383189 -  -9.8  -3.77722   GTTAATCAGTAACAA             CCGGGG TTTCGG CCCCGG              TTCGCTTTTATTTCT  79 33
        trxB 2369295 .. 2369321 -  -9.5  -5.04249   CGGGGAAAAAATAAA        GGCGAC-CCATA GTCG CATGGTGTCGCC         TTCTTTACTTTTGTT  93 55
        cydD NONE
        cydC NONE
         aat 2364835 .. 2364845 -  -8.2  -3.40622   TACTCCGAAAACACA                 CGGC TAA GCCG                 CACCAAAAGCGCAAC  65 174
        infA 2364432 .. 2364448 -  -7.9  -5.56263   ATCACAAAATAAAAA              GGCCGGC TAA ACCGACC              TTTTACTCATTCTTT 100 68
HHJ42_RS11310 2363615 .. 2363655 -  -6.8  -5.11033   GACAACCTGAAAAAA  CCGCTCGCCAACGAAC TGCTGTTTG GTTCGCTGGTGGACGG  CGGTCAGGTCACCGT  90 519
        cspD 2360518 .. 2360538 - -12.6  -4.96848   TTTTTGAGATAAAAA            TGCCAGCC GATCG GGCTGGCA            TTTTGCCTTTAGGAT 100 62
HHJ42_RS11280 2356049 .. 2356066 -  -6.9  -3.61715   CAGCCTGTTGAATAA             CGATCGG GAAG CCGAACG              AGAACATTTAACGGC  63 296
        aqpZ 2353413 .. 2353462 - -18.5  -4.06491   GCAATGCCATATAAA GCCACTGGCGCAGGGAGCGGCCAG TCG CCG-CCGCTCCCTGCCCCCCCGGC CTTCGGGGAACGCCT 100 124
        lysO NONE
         hcp NONE
         hcr 2349530 .. 2349555 - -11.9  -3.38581   ACTAACGGTTAAATA         GCCCGATGAAA GGAA TATCATCGGGC          ATCAGGCGATTATGC  85 35
        poxB 2347542 .. 2347566 -  -8.5  -3.59979   CTTCTTTACCGGAAA          GCTCTGCTGCA TAG TCCTGCAGAGC          ATTAACGGTAGGGTC  72 173
HHJ42_RS11240 NONE
HHJ42_RS11235 2344081 .. 2344098 -  -3.3  -3.92641   AAGCGGATGCAGAAA             CTCAGGC GATT GCCGAAG              CGTTGCTGGAGAAAT  55 51
HHJ42_RS11220 2342277 .. 2342305 -    -9  -3.96148   GTCGGCGAGCATAAA       TGT-CGGCATTCC TCAC GAAATGCCGGACA        ATTTACGGGGTTTAT  79 56
        artP NONE
        artJ NONE
        artQ NONE
        artM 2339147 .. 2339173 -    -3  -5.99154   TATGAAATAAAAAAA         GACGGACA GATTAGTGGGT TGCCCGTC         TTCATAATAAGAATT 100 102
HHJ42_RS11195 2338269 .. 2338282 -  -9.5   -5.5604   TGAAGCAATAAAAAA               GCCGC AGGT GCGGC                TTTCTGAATCTTACT 100 36
        grxA 2329088 .. 2329104 - -10.1  -4.54301   GAAAAAATCAATAAA              GCCCTCA ACG CGAGGGC              TTGTCAGACGATCAG  89 37
HHJ42_RS11130 2326605 .. 2326641 -  -3.7  -5.60689   TCAGACAACAAAAAA    CCCATCAACCTTG AACCGAAATGG CGGGGTTGATGGG    CTCCACAAAATGGGG  88 138
HHJ42_RS11080 NONE
HHJ42_RS11075 2317117 .. 2317144 -  -6.4  -3.96148   TTCCGCGACTACAAA        CTCTTTC-TATCC GCT GGAGATGAAAGAG        GATTACACTCAAGCT  65 381
HHJ42_RS11040 2312048 .. 2312073 -  -6.9  -4.02093   GACACAACAGAAGAA         CATCAGGA-TGC AGC GCAATCCAGATG         GCAGTAGTTATGAAC  70 340
HHJ42_RS10980 NONE
HHJ42_RS10975 2303601 .. 2303623 -  -9.1  -2.56314   ATAAATCTTAATGTA           GAGGGCCGA GGTAT TCGGCCCTT           AGTTTTATATGAAAC  66 30
HHJ42_RS10915 NONE
HHJ42_RS10910 2294864 .. 2294882 -  -7.4    -5.252   TACTGCCATAAAAAA             TGCCCTCC AAT AGAGAGCA             TTTTTACTGTATATA  91 187
HHJ42_RS10905 2293726 .. 2293743 -  -6.3   -5.4833   TCAGGCAACAAAAAA             CCCATTT ATGT AAACGGG              TTAATGAAAACAATA 100 87
HHJ42_RS10895 NONE
        ybjI 2290968 .. 2290985 -  -3.5  -3.31799   GACAATTTTTCATAA             TCATTTC GCCT GAAATAA              TGCAGCGGGTTAATT  48 97
HHJ42_RS10885 2290652 .. 2290678 - -10.9  -5.47399   CGAAGGGTAAAAAAA         TGCCTGATTGC TTTGT GCGATCAGGCA         TTCTCGAATTAATGG 100 34
        ybjG 2288490 .. 2288514 -    -3  -3.02461   TAATCCCTCTGAATA         GTTATTGAAGCG AGC CGCT-CAATA-C         TACACTTTTTAGCAG  43 44
        deoR 2287682 .. 2287706 - -12.1  -3.30159   TTAATCTTCTGATAA          CCGGATGGCGC GAA ACGTCATCCGG          TTATACGTCATTAAT  85 36
        gstB 2285230 .. 2285245 -  -2.4  -4.92239   GCAAAAAGGCAAAAA              CTACGG CTGG CCGCTG               GCAACCTCGGGAATC  71 376
        rimO 2282409 .. 2282451 - -11.5  -2.78018   AGCTGGCAGTAATCA TTATTCGCAGGCCGGACAAA TGAT TTTGCCCGGCCTG-AATTAA TTAAACCCGGCTACC  77 26
        moeA NONE
        moeB 2269890 .. 2269908 -  -3.7  -4.11216   CCGCGAGTTTCAAAA             CCCCGCG TCAGG CGCTGGA             CTGCTTACTGGCAGG  60 240
HHJ42_RS10790 NONE
HHJ42_RS10785 2265882 .. 2265911 -  -6.3  -2.74012   TGATGATGTGAATGA       TTTGACCCGGCGAC GAC GCCGCCGGG-CTGA       GGAGATTACAGCATA  53 31
        ybiV 2264761 .. 2264796 - -14.3  -2.57244   GGATCGAGTAAGTTA    TTATCAGTAGCCCTGA TATGG TCAGGGCTACTGA-AA    CTGATGACAAACGCA  87 185
        mntS 2260051 .. 2260070 - -10.7  -3.12803   AAAAGCAGGAGTGAA            GCGGCGT ACCGCG ACGCCGC             TATTTATCGGAAGGT  76 25
        opgE 2258187 .. 2258204 -  -8.4  -4.96848   TCGGTGATATAAAAA             TCCGCC TCTCGG GGCGGA              TTTTTTTGTTTTAAG  91 36
        rhtA 2256374 .. 2256401 - -15.8  -4.45517   AAAGTAGCGAGAAAA        TCTGCATGGTTA TGCA TAACCATGCAGA         AATGTAAATTTAATT 100 35
         dps 2255546 .. 2255566 - -13.3  -5.18371   GGCTACAAAACAAAA            CGGCCTCCT GTC AGGAAGCCG            CTTTTATCGTGTACT 100 67
        glnH NONE
        glnP 2253665 .. 2253676 -  -4.4  -2.95448   TTAAATTCAATCACA                GGAT TTTC ATCC                 TTCTTTCCAGACGAC  48 9
        glnQ 2252901 .. 2252940 - -12.2  -2.60725   TTAAATGAGAGGAAT  CTGGTGTGCCTCCCTTTC GGGG GAAAGGGAGGCAGAGAAG   TTAAGAGACGTGCTG  79 26
        ybiO 2250563 .. 2250580 -  -5.5  -3.15544   CTGGACCTTTATGAA             CGACGAGC AGC GC-CGCCG             TTTTGTCAATCGCCA  54 44
HHJ42_RS10700 2249104 .. 2249125 -  -7.3  -4.29432   CAAATTGGACGAAAA           CTGCATCCA GAGG CGAATGCAG            TTACGTTTGTGGGGT  74 40
HHJ42_RS10695 2246394 .. 2246411 - -12.7  -4.58283   CAAGTTCTCCAAAAA             GTGGGGC CTGC GCCCCAC              ACCGATTTTTAACAG 100 207
        ybiX NONE
        ybiI 2245302 .. 2245314 -  -5.5  -3.57462   CACGGCAGCGTTAAA                GGCAC GGA ATGCC                ACGCAAAATACAAAT  59 71
HHJ42_RS10680 2244613 .. 2244634 - -13.7  -5.81412   GCCAGCTAAAAAAAA           GCCCGTCCA GTGG CGGACGGGC            GAACAAGGGTAACAT 100 226
        cecR NONE
        hlyD NONE
HHJ42_RS10640 NONE
HHJ42_RS10635 NONE
HHJ42_RS10630 2232098 .. 2232110 -  -4.8  -3.54475   TTCTTCAGGAGAGAA                GCCA TGAAG TGGC                AACAACGTGTTCGTG  53 388
HHJ42_RS10620 NONE
        clsB NONE
HHJ42_RS10610 2228809 .. 2228819 -  -3.2    -4.015   GCATGGACGAAATAA                 GCTC CTT GAAC                 TGACAGGAAAAAGCC  57 219
        yvcK 2223182 .. 2223208 - -16.7  -2.80074   GTCGTGACAAGATGA         CGAAGCCGGAA TATTC TTCCGGCTTCG         TGTTAACCTAAAGCC 100 28
        bioA 2215419 .. 2215435 -  -3.6  -3.93782   GCACGTAATATTAAA              GCTGCC GGGCT GGCAGT              GTTAGCCCACGGAGA  58 185
HHJ42_RS10530 2213736 .. 2213762 - -13.8  -2.53759   AATACCTTTAAGTGA         TACCAGATGGCA TTG CGCCATCTGGCA         GAGTGATTAACTAAA  86 32
HHJ42_RS10525 2212282 .. 2212323 - -11.5  -3.09234   ACAAATCGTATCGAA CTGTAGGCCGGATAAGGCG TTTA CGCCGCATCCGGCACATAG  TTAACAGCTCCTACT  79 36
HHJ42_RS10505 2205957 .. 2205971 -    -7   -4.7373   CTACTGCATGAAAAA               GGCCGC TAT GCGGTC               GGGCAGGGACCAATG  85 105
        ybhA 2204034 .. 2204054 -  -9.7   -3.2964   AAAGTGTGTCGATAA            CCGCCTGAT TAA ATCAGGTGG            CTATAAATGAACTGG  74 13
        modE 2200273 .. 2200304 -  -3.7  -4.30719   GTGTTTCATAACAAA      TTGTCAACACGCT TAGCAC AGCGTGGCGATAA       TCACGCTGTCGGCAT  64 6
        modF NONE
        galE NONE
        galT NONE
        galK NONE
        galM 2194202 .. 2194218 - -10.1  -4.27467   CAATATGAAGATAAA              GCCCTCA TGA CGAGGGC              TTAACATTACTGAGC  85 32
        gpmA 2193223 .. 2193244 -  -5.1  -5.95286   ACGAAAAATAAAAAA           GCCGA-CTCA TTT TGCGGTCGGC           TTTCTCATTTTTAAA 100 51
HHJ42_RS10430 2191314 .. 2191333 -  -9.3  -4.78661   AGGGAAAAATTAAAA            GGGAGAG ACTCCG CTCTCCC             ATTATTGGCTATTTT  90 47
        zitB 2190264 .. 2190294 - -15.5  -3.15544   CCGGATGTGGATCAA       CAGCGCACGCGAA AGAGG TTCACGCGCGCTG       TCCCATTAATGGTGA 100 31
HHJ42_RS10275 2165218 .. 2165229 -  -2.2  -4.21827   TGAAAGAGGGGAAAA                CCTG GGTA CAGA                 GCTCTGGGCGCTTGC  57 101
        gltA 2163762 .. 2163787 -  -7.6  -4.99035   TCAGCCATATAAAAA         GAACCCGCTCT ATTAA AG-GCGGGTCC         GGAAAGTGAACGGCT  84 54
HHJ42_RS10260 NONE
        dtpD 2156401 .. 2156433 - -19.4  -2.98381   GAAGCGAGGAAAGGA      GCCTGATAAAACGC AGCGA GCGTTTTATCAGGC      ATGGTGCTGGCTTAT 100 40
        kdpF NONE
        kdpA NONE
        kdpB 2150037 .. 2150050 -  -2.3  -2.65766   GTAAACCTCACACCA               GACCG CAAA CGGTT                AGCAGTAAATCAATG  39 4
        kdpC NONE
        kdbD NONE
        kdpE 2146016 .. 2146053 -  -4.9   -4.2461   ATTTTCATTAAGAAA   TTAAACCTGCCAAATAA TAAT TTTCGGGGCAGGTTTAA    TAATAAATTAATAAT  65 69
HHJ42_RS10180 2145676 .. 2145692 -    -3  -3.60792   CCTGTAATGCTTAAA             GT-CAGG GAGA CCTGTAC              GCTGGGGTGCCCTTT  50 51
        speF NONE
        potE 2141857 .. 2141876 -  -9.2  -5.39905   ATCAAATAAGAAAAA            GGGCGGTC GGAA GATCGCCC             TTTTTTGCTTTGCTT 100 43
        ybfF 2138565 .. 2138586 -  -7.9  -2.94232   TTCGGGGGAAACAAT           CAGCCAGGC CTCT GCCCGGATG            GATAGCGCGCCATAA  61 116
        ybfE 2138206 .. 2138219 -  -2.3  -2.90227   GCGGAATCAGCAAAC               GAGCA GGAC TGCAC                ACTGTGCTACATGAA  41 50
        fldA 2137541 .. 2137568 - -16.4  -3.19463   GGCATTATCTATTAA        TACGGCGTAGAC ATGA GTCTACGCCGCA         TCACATCAGGCATTG 100 31
         uof NONE
         fur 2136802 .. 2136819 - -11.3  -5.24129   CCCTTGTATAAAAAA             GCCAACC TGCA GGTTGGC              TTTTCTCGTTCAGGC 100 45
HHJ42_RS10095 2127450 .. 2127462 -  -3.5  -2.50074   GGCTGGATAATAGAG                TTAAT TTA ATTAA                TGTTATAATGACGAA  42 18
HHJ42_RS10090 NONE
HHJ42_RS10085 NONE
HHJ42_RS10080 NONE
HHJ42_RS10075 2123624 .. 2123663 -   -16  -3.05596   CAGCGTCGCATCCAA  CAATAAAAAGCGGCAGGGA TCT TCTCTGCCGCTTTTT-TTG  TCTGAGATTACATTG 100 33
        nagB 2120469 .. 2120492 - -10.4  -3.08726   GATTTTAAAAAATAT          TGCCCTGAGCA AGG TG-TCAGGGCA          GGGATAATAATTACA  73 36
        nagA NONE
        nagC 2118032 .. 2118045 -  -3.9  -3.37975   ATGGACTACCCAGAA               TATTG ACAA CAATA                AGCGCCACTATAAAA  50 46
        nagD 2117237 .. 2117262 - -13.3  -4.41633   GATGGGTAAAAATAA         GAAACCACGCC CTGA GGCGTGGTTGC          TATTCAGATAACGTC 100 29
        asnB 2115311 .. 2115334 - -16.8  -3.78329   CCCCAGTAACTGAAA          TTGCCCCGGA TTTC TCCGGGGCAA           TATTACACGTCTTAT 100 37
HHJ42_RS10040 NONE
HHJ42_RS10035 NONE
HHJ42_RS10030 NONE
HHJ42_RS10025 2114557 .. 2114573 -    -3  -3.33815   ATGTGCTCTAACCAA             CTGAGCT ACGT AGC-CAG              ATTGTTTCTTCGATG  46 39
HHJ42_RS10020 NONE
HHJ42_RS10015 NONE
HHJ42_RS10010 2114234 .. 2114249 - -10.4   -5.1417   GCAGAAAAGCAAAAA              GCTCGC CGAA GCGAGC               TTTTTTAATGTGGCT  93 36
        miaB 2111330 .. 2111355 - -13.3  -5.51046   TAAAGAGAGAAAAAA         CAAGGCCCACCG GAA CGGCGGGCCT-G         AGAATTACGGCTGAT 100 30
HHJ42_RS09995 NONE
        ybeY 2109649 .. 2109672 -  -8.8  -4.43477   GTTAGTTAATCAAAA          CGCCGTCGTT AATC ACCAACGGCG           GGGACGTCTGCCAGT  84 56
        corC NONE
         lnt 2107053 .. 2107071 - -13.2   -5.4756   AACCGTAAGAAAAAA             GGGCATGA TAA TCATGCCC             CAGAGCGTGTTGAAA 100 126
        gltI 2103656 .. 2103683 - -16.4  -5.26316   CTACTCCAGAAAAAA        GAGGGTAGCAGC GTTA ACTGCTACCCTC         GAAGATTGTTACCCA 100 148
        gltK NONE
        gltL 2101366 .. 2101378 -  -3.3  -3.71686   CGCAATCTAACAGAA                TTGGC AGT GCCAT                TGTTGCTCCTTGTTG  53 143
        rihA 2100011 .. 2100024 -  -3.7  -3.02511   CGCACTGGTGGAACA               GGCGC GCGA GCGCG                TAATAAAAACAGGGG  46 444
        leuS NONE
        lptE 2096495 .. 2096506 -  -2.2  -3.28712   TTGTTCCGGGTACAA                CCGA ATCA TCAG                 TTACCCAGCGTGGTG  45 22
        holA NONE
        nadD 2094825 .. 2094839 -  -2.8  -2.90075   CCCTCCGTAACGACA               GGTATC AGC GATACA               AGCCTTGTTGGTTAA  42 15
HHJ42_RS09920 2094034 .. 2094050 -  -6.5  -3.53343   AATCGGCTTTCGAAA              GTGGGCT ATC ATCCCAC              CCCGCGCCGCAGATT  60 169
        rsfS NONE
        rlmH 2093138 .. 2093166 -  -2.4  -2.78679   GTTTTCTACTCAAAG        CTCACTTATCAC TCACG GTGATAAGGATG        GTTGGTGGTGATGCT  40 5
        mrdA NONE
        mrdB NONE
        rlpA NONE
        dacA 2087572 .. 2087591 -   -15  -3.50456   GTAATTAAATAGCAA            CTCCCGCC AGAA GGCGGGAG             TTTTTTACTGATGCT 100 83
HHJ42_RS09885 NONE
        lipB 2086499 .. 2086520 -  -5.1  -3.23395   AGGTATTATGAGTAA           TGACCCAGT GTAA ATTGGGCCA            TTGATGTATGGAATT  52 39
        lipA 2084695 .. 2084712 - -11.3  -4.96848   TGTTCGATACAAAAA             CCCGCTT CAAA AAGCGGG              TTTTTTATCAGACAG 100 62
        crcB 2083020 .. 2083036 -  -9.4  -4.36729   AGCAAGAATTCAAAA              CCCGCT TAATC AGCGGG              TTTTTTTTGGTTTTT  86 39
        dcuC 2080049 .. 2080071 - -13.4   -4.0162   GGGTGACATGATAAA           GCCGGAGGAA ACT TGCCTCCGGC           ATTACTATTTACTTG 100 34
        citC NONE
        citD NONE
        citE NONE
        citF NONE
        citX NONE
        citG NONE
        citT 2070555 .. 2070582 - -18.5  -5.42265   TTAAATCATAAAAAA        GCCCGCCAGGT GGGCTT ACCTGGCGGGC         GTGATGATTTATTCA 100 57
         rna 2069522 .. 2069544 - -12.7  -5.11836   ATACCCAAAAGAAAA           CCCTCACCG TCAGG CGGCGAGGG           TTTAACTCACATGAT 100 175
         rnk 2069000 .. 2069019 - -12.2  -3.60805   ATATTTGAGCGGAAA            GAGGATGC GAGT GCATCCTC             TGGGCAAAGCGAGTT  89 60
        uspG 2068223 .. 2068250 - -11.2   -4.7373   TTATTGCATTAAAAA        GCCCTGCAGGGA TGGC TCCGGGCAGGGC         GGGAGACTTATTCTG 100 45
        dsbG NONE
HHJ42_RS09760 2063486 .. 2063498 -  -5.5  -4.73448   ATAGACATCTAAAAA                CGCTC TCT GAACG                TTACGGGGTGATTCG  74 152
HHJ42_RS09755 NONE
HHJ42_RS09750 2061474 .. 2061488 -  -3.4  -2.78384   TGCTGGTGGATTACA               GCGCCG TAT CTACGC               TGGATGATGTTGAGT  41 193
        hcxA 2059048 .. 2059068 -  -7.5  -3.43071   GTTGATAGCAATTAA            GCCCTCTTA ATT CAGGAGGGC            ATTTGTATTACCGGA  65 255
        fepB 2050305 .. 2050326 -  -5.9  -4.17023   TTAACCAGTGGAAAA           CTGGCGCATA GCG TACG-GCCAG           GTCTGTTGATGTTGC  70 418
        fepD NONE
        fepG NONE
        fepC 2046525 .. 2046537 -  -7.7  -2.98789   ATCCAGAAAACAGGA                TGCCA TGA TGGCA                GACCACTTAGTTTAA  62 37
        fepA 2037359 .. 2037388 -  -8.5  -3.30124   TTGTAGGCCGGATAA       GGCGTTCACGCCG CATC CGGCATGAACTAC        GCGCACTTTGTCAAC  69 56
        entD 2036497 .. 2036507 -  -8.2  -2.54919   ATGGATGGAGAATAT                 GCCG CAG CGGC                 GGATCGTGGGTGGTT  59 103
HHJ42_RS09635 2033457 .. 2033488 -   -16  -2.60075   GGCTTTTTAAGCAAG      CGCCTTTGCGAGAA GATT TTTTCGCAAAGGCG       GGCAGAAGAAAGGGA 100 49
HHJ42_RS09630 NONE
HHJ42_RS09625 2030595 .. 2030606 -  -5.8  -2.71731   GTGAGGGCGCAACGA                CCTG GGAT CAGG                 ATTTGATATTGAAAT  50 21
HHJ42_RS09620 NONE
HHJ42_RS09615 NONE
HHJ42_RS09610 2027269 .. 2027290 -   -13  -3.28712   TTTTCCCCTGTATAA           GCCGGGCA ATTTAA TGCCCGGC            GGAATGATGTTAATT  95 39
HHJ42_RS09605 NONE
HHJ42_RS09600 2025278 .. 2025310 - -11.4  -3.45571   GTCTGGAAAGATGAA     GCCCCAGGA-CGATA TTTC TATCAACCCTGGGGC      TACCTACCCAAACCT  85 350
HHJ42_RS09585 2023242 .. 2023253 -    -3  -3.29043   AAGGGTGTTTCATAA                CATT GTTA AATG                 TAAGTTAAAACACCA  46 77
HHJ42_RS09580 NONE
HHJ42_RS09575 NONE
        nfsB 2021784 .. 2021801 - -14.1  -3.38224   ATCTGAGGGGAAATA             GCCGGGC AGAT GCCCGGC              AAGAGAGAATTACAC 100 35
        ybdG 2020420 .. 2020446 - -13.1  -3.63895   GTCAACCATCCGAAA         CCGCTCTCATC CATTC GATAAGAGCGG         TTTTTTTAATTACTG 100 35
        cusR NONE
        cusS NONE
        nrfB NONE
        nfrA NONE
HHJ42_RS09515 2004227 .. 2004246 -  -7.9  -4.24432   AAAGTGAAAAGGAAA            GGAGCAA GCTAAG TTGCTCC             CTTTAATCATTAATA  76 35
        ompT 2002607 .. 2002635 - -11.7  -3.33045   TAACAGTAAACAAAT        TCCCCGGGGCTAT ACA ATACCACCGGGGA        GAAAATCTATTTAAC  85 45
        folD NONE
        ybcJ 1999246 .. 1999267 - -15.9  -3.95836   AGTCTGAAAAGAGAA           CCGGCCTGT TGAT ACAGGCCGG            GAAAGGGATCAGGCA 100 34
HHJ42_RS09475 1998149 .. 1998159 -  -6.8  -3.70446   CTACAGCGAAGAGAA                 CCTG AAA CAGG                 CGCGTGCGGCGCTGG  63 513
        ppiB NONE
        lpxH 1995818 .. 1995837 -  -6.4  -3.28712   GGTGCTTTTTCAGAA            TCTGTCCA TTCG TGGTCAGA             AAGGAAAATGGATTA  59 21
HHJ42_RS09455 1995309 .. 1995319 -  -2.4  -4.08394   ACATGCGTCTTAAAA                 CTCC TGT GGTG                 CACAACTCTCGGCTT  55 99
        purE NONE
        purK 1993686 .. 1993697 -  -7.2  -3.30124   CGGTAGGCCTGATAA                GGCG TTCA CGCC                 GCATGCGGCAAGAAA  63 52
        allD NONE
        allC NONE
        allE 1985258 .. 1985277 - -13.6  -5.67063   TTGACTACAAAAAAA            GCCACGGT ATAA ACCGTGGC             AAAATCCAACATAGC 100 68
        allS 1973408 .. 1973433 -  -4.7  -2.94412   GTGAACCTCAAATCA         GCTTGCGCGCTA TTT TA-CGCGCCAAC         GCGCAAGGAAACTTG  48 45
        tesA NONE
        ybbO NONE
        cnoX 1966588 .. 1966615 - -12.7  -3.18869   GAAGAAATGATGCAA        TGCCGGATGCG CAGCAT CGCATCCGGCG         TTGTGGTTCATGTGC  86 55
HHJ42_RS09315 NONE
HHJ42_RS09310 1963604 .. 1963617 -  -8.1   -3.4252   TTGTAGGCATGATAA               GACGC GCCA GCGTC                GCATCAGGCGATGAC  67 29
HHJ42_RS09300 NONE
HHJ42_RS09295 NONE
HHJ42_RS09290 1960280 .. 1960298 -  -3.8   -4.7497   GCGATGTAGCAAAAA             TTACCGGC CTG ACCAGCAA             AGCCATTCGCTTCTA  73 393
        copA 1955096 .. 1955125 - -14.3  -3.30338   ATAATTTCCCTATAA       CGGATGCGCCACC CTAA AGCAGCGCATCCG        CAATGATGTACTTAT 100 37
HHJ42_RS09255 1953311 .. 1953322 -  -7.2  -2.98014   AACGAAGCAAGCATA                CGCC TGAT GGCG                 GTCCAAAAAAAAGAG  59 176
        ybaK 1952761 .. 1952784 - -16.8  -3.67976   GGCAGTAATCCGAAA          GTGCCGGATG TTCG CATCCGGCAC           AATGCTTAATCGCGA 100 31
         fsr 1949630 .. 1949656 - -15.3  -3.09831   GCGACTGTAAAACGA         TGCAGCCAAAG TTTGC CTTTGGCTGCA         ATGAAATCAGTCTTT  93 32
HHJ42_RS09235 1947648 .. 1947701 -  -9.5  -2.70022   CGTAGGCCAGATAAG GCGTTCACGCCGCATCTGGCATT TTGCTTTC AATGCCTGATGCGACGCTGGCGC GTCTTATCAGGCCTA  69 73
         aes 1945143 .. 1945187 -  -2.2  -5.00616   GCTGGCGGGAAAAAA TACGAATATATTCCGGCGC TTAATGCC ACGCCGGAGCATAT-CGAA ATGATGGCTAATCTT  71 33
        priC NONE
        rsmS 1936176 .. 1936192 -  -5.7  -3.98236   AAACGCGACTACAAA              GGCGACG ATC CGACACC              AGCGGTTGGGTAATA  63 250
        acrA NONE
        acrB 1927526 .. 1927541 - -11.8  -5.28176   GTTATGCATAAAAAA              GGCCGC TTGC GCGGCC               TTAGTGATTACACGT 100 45
        tomB NONE
         hha 1926248 .. 1926259 -  -2.2  -4.07568   TCCGGTTGCTGAAAA                TGCG GCAA CACA                 GTAAGACGAAAAGTC  55 163
         maa NONE
HHJ42_RS09135 NONE
        pdeB 1922906 .. 1922922 -  -5.9   -3.1916   CAAAAAATCCCAACA              TGGCTAA ACT TTAACCA              CAACTGACGTCGCAA  54 476
HHJ42_RS09115 1922268 .. 1922287 - -13.6  -3.21258   ATTAAGCGAAGTTAA            CCCTCTCC GCCC GGAGAGGG             TTAGTAGTTCCAGCG  93 26
        tesB 1920575 .. 1920601 -  -9.5  -5.07053   AAGCACTGCAAAAAA        CAGCCGGACGGT TTTC ACC-TCCGGCTA         TTTTTTTAATTGTGA  93 31
HHJ42_RS09070 1911880 .. 1911892 -  -6.3  -5.29445   CTTGAACAATAAAAA                CGTTA TGG TAACG                CCTGCGATTAACCCG  87 51
        queC 1910639 .. 1910661 - -10.7  -3.12351   TTTTGCCAGACTGAA           GAGGTCATA CCAGT TATGACCTC           TGTACTTATAACAGT  76 522
HHJ42_RS09015 NONE
        ampG 1898143 .. 1898163 -  -4.9  -5.26907   CAATATAAAATAAAA            CAATTATTT AAC AAATAATTA            TCATTGAGGTGACAA  82 226
        cyoA NONE
        cyoB NONE
HHJ42_RS08995 NONE
HHJ42_RS08990 NONE
        cyoE 1893075 .. 1893088 -  -8.1   -5.4756   AATGCTAAGAAAAAA               GGTGC CGTA GCACC                TTTTTAACTGAGAGG 100 46
HHJ42_RS08980 1891553 .. 1891582 - -15.1  -3.17688   TAATGACGTGACGAA       GCACGGTGCTGTT CATG AATAGCACCGTGC        TTAATATTTAATAAG  95 33
HHJ42_RS08975 1888754 .. 1888768 -  -2.8  -3.98075   ACAGTAGGTAAATAA               TAATGC AGG GCATTG               TCATCGAGACTGAGA  54 521
        panE NONE
        yajL 1885269 .. 1885312 -  -6.9  -3.02144   GTATCGCCCGTAATA TGTGGTTGTAACGTCGCATCT GGTC AGATGCGACGTTT--ACCGCA TCCGACACTACTCGT  58 33
        xseB NONE
        ispA NONE
         dxs NONE
        yajO 1879081 .. 1879105 -  -8.5  -2.50994   CGGAAGTGGATTAAG          CCCGATCGTTC CTG GCACGATGGGG          TCGCTGGCGGCGATT  58 475
HHJ42_RS08895 1874671 .. 1874702 -    -8  -3.96486   AATGACGGAAAAAGA      TGTTGCGGGACG CACAATAT CGCCCCGCAATA       CGTTTACTGCATAAC  72 29
         tsx 1873493 .. 1873513 - -11.2   -5.3236   AGAAGTGATAAAAAA            TGCCGGAT ATGAA ATCCGGCA            TTCTCACAATTAGAA 100 35
        acpH 1866866 .. 1866877 -  -2.2  -3.39895   GTGTGGATGAATTAA                CGTC TTAT AACG                 CCTTGCGTGACGCCT  45 18
        sbcD NONE
        sbcC 1855039 .. 1855060 -  -3.7  -3.48684   TCACAACCACCAGAA           CGGCTAC CAATCACC GTAGCCA            ATAAAGTGATAGCTT  52 107
        araJ 1853490 .. 1853537 -  -9.8  -3.69354   GCGGAGAATGTGAAA CGCCG-GTACGCAAGGCGAAACA TGG TGATTCGAGCGGCGTACGCGGCG CTGCATGGTTATGGC  77 320
        rdgC 1851576 .. 1851590 -  -7.1  -3.30124   TCGTACGCCGGATAA               GACGC GGCAG GCGTC               GCATCCGGCATTAAA  63 54
        proC 1847300 .. 1847340 -  -9.9  -4.51765   TACAAGGCAAAGAAA GCCGGACGT-A-ACCG-CAC CGAA GTGGCGGCCTGACGTCCGGC AAAAGCCATCAGGAT  89 34
        ddlA 1842310 .. 1842334 -  -8.6  -4.42851   TGAAGAAACTGAAAA          CGCCCAATAA GAATA TTACCGGGCG          TTTGAATATTACATT  84 34
HHJ42_RS08725 1841407 .. 1841463 -  -2.8  -4.17089   TGGAAAGCCCGAAAA TCACCCGCAATCTGACTACG-GCCTGG TTTG CGAAGCGCGTAGACGAACGGCGGGCGC GTTGTATGAAACAGT  58 101
        ampH 1837598 .. 1837634 - -11.8  -3.55866   CTATATCGAAATGAA   TAAAGGCAAACTGGTCG CTAT CAACC-GTTTGCCTTCA    GAGTATTAATCAGGA  88 35
        hemB 1832416 .. 1832437 - -14.5  -3.60792   GGGGTAAGGGGGAAA           TGCCGGGTT GGAT AACCCGGCA            TAATGATCATTAACG 100 35
HHJ42_RS08670 1827722 .. 1827732 -    -4  -3.91488   AATTTGCTCAAAGAA                 TCAT TTT ATGA                 ATAACAAAACCTTCA  57 7
HHJ42_RS08665 NONE
HHJ42_RS08660 NONE
        yaiO 1825011 .. 1825061 - -22.4  -3.06302   ATCATCTGCACGCAA TATACTATAGGGGGGTATGCTAT ATGTCA AT-GCATACCCCCCTATAGTATA TAACACTGGAGAATA 100 138
        frmR NONE
        frmA 1823530 .. 1823550 -  -9.7  -3.76482   GGAGAGTATTAAGAA            CCCCGTC TGAACTG GACGGGG            TAAACCAGCGGGAAA  79 41
        fghA 1822604 .. 1822615 -  -7.2  -3.28791   ATGTGGGCCGGATAA                GGCG TTTA CGCC                 GCATCCGGCAGTCGT  63 50
        lacI 1820561 .. 1820574 -  -6.7  -2.70932   TGGGGTGCCTAATGA               GTGAG CTGA CTCAC                ATTAATTGTGTTGCG  55 42
        lacZ 1817366 .. 1817386 - -14.7  -3.38046   TCCTTACGCGAAATA            CGGGCAGAC ATA GCCTGCCCG            GTTATTATTATTTTT 100 33
        lacA 1815287 .. 1815307 -  -3.2  -3.97947   GCCATCGATTACAAA            CGGTAATC GGCTG GGCTACCG            CGAGCGTAGTTTATG  55 131
HHJ42_RS08520 NONE
HHJ42_RS08515 1792285 .. 1792300 -  -3.3  -4.55491   TAGGTAACGATAAAA              TCAAG CTGGTT CTTGA               GCTGACGGAACGTAA  65 461
        betI NONE
        betB NONE
        betA 1783377 .. 1783390 -  -3.1  -2.80016   TGTCACGATGAAGCA               TGAGA GTTA CCTCA                GTGTTTTATATAAGG  43 91
HHJ42_RS08480 1781526 .. 1781552 - -16.8  -4.38712   GCCATTGCTACAAAA         CCTGACATTTTG ATT CAAAATGTCAGG         TTTGGTTTAATAGCC 100 299
HHJ42_RS08475 1780689 .. 1780699 -  -3.2  -3.14132   GTGGGGGGGTAGTAA                 CAAC GCT GCTG                 TGTCATAACAATCCT  46 28
HHJ42_RS08470 1779699 .. 1779710 -  -4.4  -3.85242   AAAGAGCCATAACAA                TAGC TGTT GCTA                 ATGCGCTGCGGTAAA  58 101
HHJ42_RS08460 1777350 .. 1777370 -  -2.5  -4.81734   AAATATCAGCAAAAA            GCCAGCATC ATG AATACTGGA            TATTTATAGCCTGCA  68 102
HHJ42_RS08455 1776466 .. 1776492 - -13.2  -3.53224   CAGCTCTTCTGTAAA         TATCCTGACATT AAT AATGCCAGGATA         TTTACAGTTAAAAAG 100 128
HHJ42_RS08430 NONE
HHJ42_RS08425 NONE
        rclC 1769213 .. 1769223 -  -5.4  -4.17316   ACCCTTTGAAAATAA                 TCTG CTT CAGA                 GTATTGCAGATGCCC  67 439
HHJ42_RS08410 1767440 .. 1767475 - -19.1  -3.10056   ATTATTTACTGAATA    CCTACCCTGGCACCG ATTAGA CGGTGGCAGGGTAGG     GTAAATCTTATGTGA 100 53
HHJ42_RS08400 NONE
HHJ42_RS08395 1760665 .. 1760686 -  -8.7  -3.70773   CGCTACACCGAATAA           CGGGTCC TTTATCCT GGACCCG            TTTGGGTATTAGCGG  72 34
HHJ42_RS08380 1757534 .. 1757561 -  -9.3  -4.20981   TCAATAAAGGATAAA        TGTCAGGGAGAT AATGA ATCTCCCTG-CA        AGGTTATTACAAATG  82 32
HHJ42_RS08375 1755804 .. 1755826 -  -4.8  -5.00616   CCTCGCTTTAAAAAA           GAGTGCACTT CGT AAGTGCCCTT           ATATAAATAACGAGT  77 452
HHJ42_RS08370 1755522 .. 1755536 -  -5.7  -3.29511   TGGATTTTTCGAGAA               TGGAG GCTAT CTCCA               CTTTACTGGTCGATG  56 168
HHJ42_RS08365 NONE
        rpmJ 1754827 .. 1754859 -   -13  -4.26344   ACATCCCCAGGAAAA      TTAATGCTGGTGTA ATAAA TACACCAACATTAA      TCCGGTCTGATTATT 100 77
        ecpR 1753236 .. 1753248 -  -4.8  -2.53876   CCCGAGTTGAATTGA                GGAC ATGAA GTCC                CGGTGAGTCATTTTT  48 62
        ecpA 1752589 .. 1752606 - -12.7  -4.44667   CCGTCCAAGAATAAA             GCAGGGG GGTA CCCCTGC              TGGTACATCAGAGAG 100 42
        ecpB 1751699 .. 1751711 -  -9.1  -3.16071   GGCGAGATGAATATA                GAGCG GGA CGCTC                ATGCCGTCCTGAAGC  70 212
        ecpD NONE
        ecpE 1746754 .. 1746786 -  -4.8  -3.84619   AAATCGTAAAGAGAA      CTGCGGTACGTC GTATGCAGG GACGTATCGCGG      TTGGCTGGTGTACTT  59 271
HHJ42_RS08320 1746160 .. 1746178 -  -8.8  -4.98255   TTTGAATGATAAAAA             TGGCGCAA ATA TAGCGCCA             TTTTTATAGGTTAAA  91 237
HHJ42_RS08290 1738444 .. 1738472 -  -5.4  -4.08557   TCTTTTAAATAACAA        CGCCATTAAAAA CGCTT TGTTTAATGACG        TTTTTTTATTGTTTC  65 189
        phoE 1733774 .. 1733799 -  -9.1  -3.90291   ACGGCGTGAATGAAA         TGTGCCGGATGC ATC ACATCCGGCA-A         TATTCATTAAAACTG  79 32
        pepD 1729752 .. 1729783 - -17.3  -3.86776   TAATGAAGGATGAAA      CTGCCGGAAGGCG ATTAAA CGCCATCCGGCAG       CAAATCAAATAATTA 100 38
HHJ42_RS08165 1716420 .. 1716434 -  -7.1  -3.28712   CGGTTGGCCGGATAA               GACGC GTTTA GCGTC               GCATCCGGCATATAT  63 50
        flgA NONE
        flgM NONE
HHJ42_RS08090 1704538 .. 1704558 -  -5.4  -2.84919   AGGGATTGAGAATCA            GGCGGAAA ATCCG TTTCCGCG            ATGGGGGAAGGAATT  51 45
HHJ42_RS08085 1703493 .. 1703509 - -10.8  -3.37464   TTACGAAGTCGATAA              GGCCGG GAAAA CCGGCC              AGAAAGCGTTAGCAA  80 34
HHJ42_RS08080 1701006 .. 1701029 -  -5.3  -3.30124   GCGTAGGCCTGATAA          GCG-AAGCGC ATCAG GCACTTGCGC          GTTTTACCCTAGTGC  54 29
HHJ42_RS08075 NONE
HHJ42_RS08070 1699081 .. 1699091 -  -2.4  -4.62904   AAATATCGCCAAAAA                 GGGC AGA GCAC                 CGGTTTACCATCAGG  66 288
HHJ42_RS08025 NONE
HHJ42_RS08020 NONE
        fliP NONE
        fliQ 1689860 .. 1689871 -  -2.2  -3.35813   GCGCATCTTAATGAA                CCAGC AGG GC-GG                CCTGGGTAAACAGGT  45 6
        fliR NONE
        flhB NONE
        flhA 1685819 .. 1685874 -  -8.4  -3.30124   CCGTAGGCCGGATAA GGCGTTCACGC-CGCATCCGGCA ATATGCACCGA TGCCGGATGCCTACATCAACGCC CCCATTATCTTCAAC  69 13
HHJ42_RS07990 NONE
HHJ42_RS07975 1682938 .. 1682959 -  -8.7  -2.60723   TGACGGGCAATGAAG           CCTGGCAAA AGAT TATGCCAGG            TGAATGGCGCTTATT  59 36
        fadE 1678739 .. 1678756 - -12.7  -4.56367   TAGCGGATAAAGAAA             CGGAGCC TTTC GGCTCCG              TTATTCAATTACGCG 100 34
        yafV NONE
        tssB NONE
        tssC NONE
        tssE NONE
        tssF NONE
        tssG NONE
        tagH NONE
        tssJ NONE
        tssK NONE
HHJ42_RS07835 NONE
        tssH NONE
        tagO NONE
        tssA NONE
        tssM NONE
HHJ42_RS07810 NONE
HHJ42_RS07805 1642777 .. 1642787 -    -4  -4.60487   TAGGAGTGGTAAAAA                 CTTT CCT AAAG                 TTATTTATTGTCCTC  69 232
        gloB 1638525 .. 1638539 -  -4.2  -3.42996   GACGACCGATCATAA               CGGC GAATGGA GCCG               ATGACAAGAAAGTTT  52 43
        mltD 1637089 .. 1637109 -  -9.7  -5.73978   AGCATAAATAAAAAA            GGCACCG GGGGAAT CGGTGCC            TTTCATTATCTGGTT 100 43
HHJ42_RS07755 1634212 .. 1634241 -   -10  -5.80817   CCGAAGATAAAAAAA       GCGATCGCCGCA CTGGAT TGCAACGACCGC        CTGGTTAGCCCGGAA 100 61
        metN NONE
        metI NONE
        metQ 1624373 .. 1624390 - -12.7  -3.75505   TTGTAAAAATGACAA             GACGGGC AAGC GCCCGTC              CTGAATGATATTACA 100 63
        rcsF NONE
        tsaA 1623121 .. 1623139 -   -11  -3.42056   AGTTGGAAGGTAGAA             CAGGCTCA AGG CGAGCCTG             GGACAAAAAAAGTGA  80 88
        proS 1621343 .. 1621363 - -11.1  -5.10497   AATCCATGTAAAAAA            GGGCCCCGA AAT TCAGGACCC            TTTCTGGCATCAGCC 100 35
HHJ42_RS07680 1620450 .. 1620461 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG TTCA CGCC                 GCATCCGGCATTTTG  63 60
HHJ42_RS07660 NONE
         rof 1617999 .. 1618031 -   -12  -3.76952   CTTAGTCAAGTGAAA      GCCGGATAAGACGC ATCAA ACGTCGCATCCGGC      GAAAGTCAATCAGGA  93 35
         map 1593319 .. 1593334 - -11.8  -5.15634   TATTGCATTAAAAAA              GCCGGC ATTC GCCGGC               TTCATTTTATTCGTC 100 32
        glnD NONE
        dapD 1589719 .. 1589741 - -10.5  -5.40474   ATCCCTGCAAAAAAA           TCGGGCAGC GTCGT GCTGCCCGT           GTACATACTTTTAGT 100 36
        yaeI NONE
HHJ42_RS07530 1588303 .. 1588324 - -10.1  -3.15658   GATTACAAAATTACA           GCCGGGTGA GACT TTACCCGGC            CCACAGAATGGCATT  74 39
        mtnN NONE
        btuF NONE
HHJ42_RS07500 1581466 .. 1581480 -  -5.6  -4.68994   ATGACCATCGAAAAA               CAGGGC GTT GGCCTG               GTGGTTGATCCGATG  75 210
        hemL 1578237 .. 1578259 - -19.2  -3.66288   GAGCCGTTAATAGAA           TGCCTCGCCC GGT GGGCGAGGCA           AAATCATTACAACTT 100 32
        thpR NONE
        sfsA NONE
        dksA 1564982 .. 1565000 - -11.7  -4.81306   TTGAACAAAAAATAA             GGCGGGA GCATT TCCCGCC             TGTGGTAAACGTGAT 100 54
      gluQRS NONE
        pcnB 1562601 .. 1562634 -  -5.9  -3.08813   GCCTATGGCAATATA     CGCCACTGTCATGCGG TAC CCTCACGAC-GCGGTG     CGCGTTTGCGTGGAC  52 0
        folK 1561950 .. 1561986 -  -8.4  -3.16971   TCATGACATATGGAA    GTTAATTTTACTAA ACATAAAAA TTAGTAAAATTAAC    TTTAAAAATTAAGGG  67 172
HHJ42_RS07415 1561102 .. 1561146 -  -3.9  -4.51197   CAGAATTAATTAAAA CAGGGAATAATTATCAAA AGTAAAAATA TTTGATG-TTATTCCCTG TATATATTCATCCGA  66 61
HHJ42_RS07410 1560060 .. 1560078 -  -7.4  -3.39784   TTACCTTCAATAACA             GCAAAAGC AAT GCTTTGGC             TCATGATGGGTTGAT  63 280
HHJ42_RS07400 NONE
        yadL NONE
HHJ42_RS07390 1555810 .. 1555826 -  -3.7  -2.61682   AAAAAAAGAAAGTAT              CTGAAGA ATG TCTTCAT              TTTTACTCCATTGTC  44 75
        panB NONE
        panC 1552754 .. 1552784 -   -12   -3.3482   TAACGTGGCAATGAA       TAACTGGCGCCA TCAGCCG TAGCGCCAGTTA       AGCATTACGCCAGTT  85 30
        panD 1551022 .. 1551038 -  -4.3   -4.2693   AAGGCAGCAAAAGAA              GCCGGAT TTC ACCTGGC              GGTGACGACCATGAA  64 156
         can 1546605 .. 1546618 -  -2.4  -3.02511   TCGACTCGGGGAATA               CACT GTCGAA AGTG                CGTGAGATCTTAAGC  42 270
         gcd 1543664 .. 1543683 - -13.6  -3.36515   CCGTATTCGGAAATA            TGCCCGGA TCTC TCCGGGCA             TTATGGTTACTTCAC 100 32
HHJ42_RS07320 1541533 .. 1541554 - -10.9  -3.17362   ACATAATAGCTAACA           TTGACCGCG GATG CACGGTCAA            TATTTCTACAAAAAG  78 51
        speE NONE
        speD 1539766 .. 1539793 - -17.1  -4.02535   GCAGAAGTAAGTAAA        TCAGGCGGAGC CTCCGT GCTCCGCCTGA         GACGTTAAACAGCGG 100 30
HHJ42_RS07295 1534305 .. 1534327 -   -12  -3.51708   CATCCGGCAAATTAA           GAAGCGGCTA TTC TGGCCGCTTC           AGATTGTTGATAAAG  88 212
        aroP 1521164 .. 1521192 - -10.2  -2.84325   TTGGTGTAAAGATTA        TTGCCCTCACCC TGCAC GGGTGAGGGCGT        AGAGAGATTAATGCG  72 33
        nadC 1518647 .. 1518660 -  -3.1   -2.5366   GCAAAAAACGAAACG               GGAAA GCAG CTTCC                GAGGTTTTTTATTTC  42 139
        ppdD NONE
        gspE NONE
        hofC 1515517 .. 1515542 - -16.2  -3.37493   CCTGTAATATACCAA         CGCTGGCGTG GAGCAA CACGCCAGCG          TTATCCCATTCCACT 100 26
        coaE NONE
        zapD NONE
        yacG 1512615 .. 1512664 - -19.4  -2.63301   GATATTTGCATATGA TGCCTGATGCGACGCTGGCGCG TTTTAT CAGGCCAGCGTCGCATCAGATA GAATGTCACTGCTTT 100 31
        leuL 1484722 .. 1484739 - -14.1  -5.60993   TCGGGCATAAAAAAA             CCCGCGC AATG GCGCGGG              TTTTTGTTTGACTGC 100 49
        leuA 1483103 .. 1483115 -  -3.3  -2.62515   AATTCTTCGACATCA                CACGG TTT CCTTG                TTGTTTTCGTTGTGT  42 10
        leuB NONE
        leuC NONE
        leuD 1479736 .. 1479754 -  -6.6  -3.27476   ATTCCTAACGATGAA             GCAAGGAG GTG CCCCATGC             GTCAGTTTTATCAGC  59 261
        sgrR 1477870 .. 1477894 -  -7.2  -3.63589   CAAAAGAGTGGCAAA          GGACTTGAGA AGGAG CCTCAAATCC          CTTCGCCGGCGTTAT  67 138
        thiB NONE
        thiP NONE
        thiQ 1474540 .. 1474566 -  -6.5  -4.08945   ATCAGGCCTGCAAAA         CGCACTACCCG TAGGT CGGATAAGGCG         TTCACGCCGCATCCG  68 51
        araB 1468870 .. 1468880 -  -2.4  -3.48529   ATAATTATCAAAAAT                 CGTC ATT GTCG                 TGTCCTTATAGAGTC  47 31
        araA 1467328 .. 1467341 -  -8.1  -3.30124   GTGTAGGCCTGATAA               GACGC GTCA GCGTC                GCATCAGGCGTTACA  65 57
        araD 1466339 .. 1466359 -  -8.3  -5.52096   AAATCCAATAAAAAA            CCAGGCT TGATTAT AGCCTGG            TTTCGTTTGATTGGC 100 59
        polB 1463975 .. 1463991 -  -2.1  -3.63744   TTTTTGCTCAAAATA              GCCCAAG TTG CCCGGTC              ATAAGTGTAGCAAAA  49 1
        rluA 1460130 .. 1460144 - -11.4  -3.30124   GTGTAGGCCTGATAA               GACGCG GCC CGCGTC               GCATCAGGCAATCGG  83 105
        lptD 1456650 .. 1456660 -  -8.2  -3.35813   TTCCATTTCAATTAA                 CCGC ACT GCGG                 ATTACGTGGTAAATC  65 47
        surA NONE
        pdxA NONE
        rsmA NONE
        apaG NONE
        apaH 1451839 .. 1451865 - -12.3  -3.36694   ATGCAGGCTTAAATA         TGAGCGCCACC CTTAC GGTTGCGCTCA         ATGCTGAACTTAAAA  83 461
        caiT NONE
        caiA 1440543 .. 1440577 - -13.6  -3.53811   CGGATGCGGCGTAAA     CGCCTTATCCGGCCTA CCG TCGGCCTGATAAGACG     CGTCAGCGTCGCATC 100 56
        caiB NONE
        caiC NONE
        caiD NONE
        caiE 1435903 .. 1435916 -  -5.9  -2.68775   CGATGAGCAAATTTA               CGCGC GCCT GCGCA                ATAACAGCCGGGATA  50 266
        rpsT 1422135 .. 1422148 -  -9.5  -5.72616   ATGGATATAAAAAAA               CCCGC CAGA GCGGG                TTTTTTTACAAAGCT 100 56
        mokC 1415195 .. 1415212 - -12.7  -4.09739   CTAACCTCCCCAAAA             GCCTGCC CGTG GGCAGGC              CAGGGTAAAAACCAG 100 101
HHJ42_RS06745 NONE
        msyB 1410398 .. 1410408 -    -4  -3.23975   ATTCCTCAAAAATCA                 TCAT CGA ATGA                 ATGGTGAAATAATTT  48 147
        satP 1409616 .. 1409633 - -12.7   -5.8187   TAGCGAATAAAAAAA             TCCCCCC AAGC GGGGGGA              TCAGACTGATGACAA 100 207
HHJ42_RS06720 NONE
        yaaA 1405256 .. 1405275 -  -7.8  -4.56978   CCGCTAAATAACAAA            TGCCGGGT AACT ATCCGGCA             TTCAGCGCCTGATGC  82 150
        arcA 1397608 .. 1397637 - -13.7  -4.64144   AATAAGGTTGAAAAA       TAAAAACGGCGCT AAAA AGCGCCGTTTTTT        TGACGGTGGTAAAGC 100 44
        robA 1392457 .. 1392490 -  -5.9  -2.71712   CTGGGTGGTTGAAAC     CGCAGGGGACATCTCG CAT CTGGACG-CCCCTGCA     TTAGATGAGCTGCAG  50 43
        yjjX 1390842 .. 1390866 - -15.7  -2.65298   TTTAGCGAGTACAAC          CGGGGGAGGCA TTT TGCTTCCCCCG          CTAACAATGGCGACA  93 444
        ettA 1386942 .. 1386975 - -15.3   -3.3903   TAATCATTTAACTAA     TACCGGATGCGATGC TGGT GCGCCGCATCCGGCA      TTTTACGCATTACTT 100 35
HHJ42_RS06595 NONE
        lplA NONE
HHJ42_RS06585 1380238 .. 1380254 -  -7.9  -2.67515   CTCACGAGCAGACCA              CTGCCGC TGA GCGTCAG              ACCACCTTCAACGAC  56 249
HHJ42_RS06560 NONE
        yjjW 1373337 .. 1373348 -  -7.2  -3.30124   CCGTAGGCCGGATAA                GGCG TTCA CGCC                 GCATCCGGCAGCTGG  63 121
        rsmC 1365587 .. 1365598 -  -7.2  -3.48276   TTGTCGGTCAGAGAA                GGCG TGTA CGCC                 GCATCCGACACGGTA  65 63
HHJ42_RS06505 NONE
HHJ42_RS06500 NONE
HHJ42_RS06495 1364784 .. 1364798 -  -5.8  -3.53012   TCTCTGGCTTGCAAA               TGATAA AAA TTATCA               TATGATATTAGTTAT  57 341
        fhuF 1363643 .. 1363661 -  -5.9  -3.98282   GGTACATTAACCAAA             GCCGGAC GTTAA GCCCGAC             GGAGAGAGAAATATT  65 274
HHJ42_RS06470 NONE
HHJ42_RS06465 1360604 .. 1360639 - -11.2  -3.26947   TAACTTTTATAGTAA    CACACGGAGGAGAG GAGGCTGT CTCTCATCCGCGTG     CTTTAAGTGAGGCAA  81 43
        dnaT NONE
        dnaC 1359254 .. 1359266 -  -3.3  -2.78384   TTGTGTCGCAGTATA                CCGCC AGA AACGG                GGATTAATACTCTTT  43 29
HHJ42_RS06450 1358711 .. 1358724 -  -5.2  -4.28254   GGGTAACAGCTAAAA               CGCG GCGTTT CGCG                GTTCAGGAAATGAAG  65 28
        opgB 1356138 .. 1356172 -   -18  -3.30124   TTGTAGGCCGGAGAA     GGTGTGTAGGTCGCAC CTT ATGCGACCTACACATC     AGTCAGGAATTACCC 100 35
HHJ42_RS06435 1353544 .. 1353557 -  -2.3  -4.73682   CGCCAGAACAGAAAA               CCTCG ATAA CGAGT                TGATTATGGAAACGG  68 444
HHJ42_RS06425 NONE
HHJ42_RS06420 NONE
HHJ42_RS06415 1348652 .. 1348676 -   -10  -2.78712   GTTTTAACGTAATGA          TGCCGGATGA GTATT TCATCCGGCG          TTTTTATTATTAAAC  71 35
        btsT 1344401 .. 1344446 - -16.3  -3.53811   CGGATGCGGCGTAAA CGCCTTATCCGGCCTACGATA GACA TTTTGTAAGCCGGATAAGGCA ACCGGTTAGTGGTGC 100 31
HHJ42_RS06400 NONE
        yjiA 1342766 .. 1342784 -  -4.6  -3.62096   TTTGATGAGTTGAAA             TGTAAGAA AGG TTCTGACA             GGAGAGATGCATATT  55 405
HHJ42_RS06380 1339260 .. 1339291 - -13.1  -4.47707   TTCCATGAAAAACAA      GGCCTTCTGCAAC ACGATG GTTGCAGAAGGCG       CAAAAGAGAGTTGTT 100 39
HHJ42_RS06375 NONE
HHJ42_RS06370 1335957 .. 1335972 - -10.4   -4.1822   GCTGATGTGAATAAA              GCGGCT ATTG AGCCGC               TTTATTGCTTTTTTG  85 53
        symE 1335406 .. 1335429 - -14.6  -3.38991   ACGTGGCGAATAATA          CCCGGTAGCA CTGG CGCTACCGGG           TCAATGTATCAGGCG 100 34
HHJ42_RS06345 NONE
HHJ42_RS06340 NONE
HHJ42_RS06335 NONE
HHJ42_RS06330 1328165 .. 1328179 -  -3.6  -3.75153   TCCCTTTAAGGCAAA               TCAATA AGA TATCGA               GAAGTATACGTAGCG  53 55
HHJ42_RS06325 NONE
HHJ42_RS06320 1326032 .. 1326045 -  -2.4  -3.75629   GAGTGGTAAGGGAAA               CTTC CCTCAT GAAG                TGACCACTTGTAGCT  51 18
HHJ42_RS06310 NONE
HHJ42_RS06305 NONE
        iadA 1322892 .. 1322911 -  -2.9  -2.57132   CGGGCGGCTGACAAC            CGTTTAA GCCGTT TCAAACG             TTCCTTTCACGCAGG  40 9
        hypT 1321535 .. 1321553 -  -3.8  -4.10161   CAGGAGTGCGCAAAA             TGATGCGA CAA TCACTTCA             GGCTGTTTTACCTGA  60 391
HHJ42_RS06280 1319903 .. 1319927 -  -8.6   -3.8512   GACTTATTATAATAA          GCGCAAGG GTAAACGTT CCTTGCGC          TTTCTTAAATTAAGA  75 128
        gntP 1314336 .. 1314349 -  -8.1  -3.50393   TTGTAGGCCAGATAA               GACGC GTCA GCGTC                GCATCTGGCATAAAC  67 169
        nanC NONE
        nanM 1302173 .. 1302192 - -12.1  -2.69246   GACAAATTGATAGCA            GGGCCCC TTTACC GGGGCCC             TGAAGCGTTAGTTTT  79 33
HHJ42_RS06200 1300944 .. 1300972 -  -3.8  -4.32482   AGCCATAATCGAAAA       GGCGCGGATGTCT ATTA AGGCATCCG-GCT        AATCTGTAAGCAATA  64 208
HHJ42_RS06185 NONE
HHJ42_RS06180 NONE
HHJ42_RS06175 1296964 .. 1296984 -  -6.8   -3.5511   TTCCAGCCAGAAATA            CCGGGAAC CTGTT GTTACCGG            GCGATGAGTGCGAAC  62 19
HHJ42_RS06165 NONE
HHJ42_RS06160 NONE
HHJ42_RS06155 NONE
        sgcQ NONE
HHJ42_RS06145 NONE
HHJ42_RS06140 NONE
HHJ42_RS06135 1290401 .. 1290414 -  -2.4   -3.6878   ACATAGTGGAAAATA               TGCT TTGTTC AGCA                TGCTGAACCGTAATG  49 258
HHJ42_RS06130 NONE
HHJ42_RS06125 1288635 .. 1288648 -  -2.4  -3.09749   TATTGCGAACAGACA               TGAG TTTCTC CTCA                GACTGGTAAAATGCC  42 23
        yjhG 1286579 .. 1286590 -  -5.8  -3.21276   CGTCCTCTCATAACA                GGGT AGCG ACCC                 ATCATTATCCGACTG  54 103
HHJ42_RS06115 1285034 .. 1285052 - -11.7  -3.63627   CCCCCATACTGTAAA             GCCGGAG ACATG CTCCGGC             TTTACAGTATTACTG  89 185
HHJ42_RS06110 1283843 .. 1283866 - -13.2  -2.67129   CTAATCAATAAAATC          CTGCCCCATA TCTA CATGGGGCAG           TTGTTCATTCTTTTA  84 38
HHJ42_RS06035 1267933 .. 1267961 -  -5.2   -3.2327   GGAATGGATCATCAA       CCGTCAGAAGCAG AGCG CAGCA-CTGACGG        ATCTGATGGATCAGT  52 409
        fecI 1260932 .. 1260944 -  -4.1   -4.1673   GAATCGGTTAACAAA                GGATT CAT AACCC                ATACTCCAGACGGAA  62 17
        fecR NONE
        fecA 1257550 .. 1257565 - -11.8  -4.19258   ACATTCCAGCTAAAA              GCCCGG CAAG CCGGGC               GTTAACACATCAGAA  95 35
        fecB NONE
        fecC NONE
        fecD NONE
        fecE 1253831 .. 1253849 -  -7.4  -4.10657   TCAGAGTCCGGAAAA             GTTCAGCC CCA GTCTGAAC             AGGCTTGCTGGCGCC  72 88
HHJ42_RS05940 1250898 .. 1250915 -  -2.7  -2.63257   ACTGGATAGAAGGTA             CTACCTC TCAC AAAGTAG              CAAAGTTCAACTGGC  40 118
        betT 1248830 .. 1248848 - -12.4  -2.92618   GGCCGAGATAATAAT             TGCCGCCC CCA GGACGGCA             TGTTGCTATTAACGA  82 34
HHJ42_RS05915 1246238 .. 1246266 -  -3.1  -3.90586   ATATGACCTCAGAAA        TGGATGGCGCTAT AGC ATATGGTCATCCA        GGAAAAAAAACACCA  55 468
HHJ42_RS05890 1241201 .. 1241218 -  -5.5  -2.96598   CAATTAAGGGACATA             GCCAGAT ACGC AACTGGC              TGATGCAAGCAGTCT  51 213
         ahr 1234459 .. 1234472 -  -3.8  -3.57883   AGAATATGTGCGAAA               GAGG GCAGCG CCTC                AGATCAGCGCTGCGA  53 48
        idnD NONE
        idnO 1231857 .. 1231874 - -12.7   -4.3898   ATTAGTGCCAGAAAA             GCAGCGC TTTC GCGCTGC              ACGTAGGGTAGTAGC 100 43
        idnT 1230445 .. 1230464 -  -4.2  -2.57931   GTGATTGCGCATAAC            TTCTCCCA ACGT CGGGGGAA             TCTTCAATCTTCCCC  44 69
        idnR NONE
HHJ42_RS05830 1227716 .. 1227739 -   -14  -3.40639   AACCTGATGAACGAA          TAAAGGGAGC GAAA GCTCCCTTTA           TTATTGTTAGCAAAG 100 149
        pepA 1223698 .. 1223709 -  -7.2  -3.30124   GTGTAGGTCGGATAA                GGCG TTCA CGCC                 GCATCCGGCAATAAC  63 58
        holC NONE
        valS 1220044 .. 1220063 -   -15  -5.47431   GTAAGAGATAAAAAA            GGCCGGAG CATG CTCCGGCC             TTCGTTTTCATCACT 100 50
HHJ42_RS05795 1218108 .. 1218133 -  -9.7  -4.31379   ATTAATTGATTAAAA         TGCCCGATAGC ACAC ACTAGCGGGCA          TTTTTTTAGAGTTCG  86 31
        argF 1216466 .. 1216492 -  -6.6  -3.39162   CATAAAATAATGTAA         TGCCGGGA TGGTTTGTATT TCCCGGCA         TCTTTATAACAATAT  61 44
        bdcA 1212523 .. 1212548 -  -5.4  -4.93877   CGTGAGTAAACAAAA         CCCAGACATC ATGGGA AATGGCTGGG          CTTAATTGAGCGTAG  78 45
HHJ42_RS05760 NONE
        pyrL NONE
        pyrB NONE
        pyrI 1210169 .. 1210194 - -10.5  -4.61231   TTACAGCGGTAAAAA         GTCTGGCTC ATTATAGG GAGCCAGAC          TTTTATTACCAACCG  91 44
        ridA 1209722 .. 1209741 - -10.7  -3.14468   TGTCATCAGACTTAA            TCCGGGC ATGATA GCCCGGA             TTTCCATCAAGATTA  78 38
        treR 1205473 .. 1205486 -  -8.1  -4.92239   GGAAAAATTTAAAAA               CGGGA ACGT TCCCG                AAACGCAGCGAAGAT  87 65
        treB 1203954 .. 1203967 -  -3.8  -3.54424   CGTTATTCCTGCAAA               TGCG AGGGGG CGCA                ATTGCGCCCCGAAGA  52 44
        treC 1202243 .. 1202268 -  -9.8  -4.61868   TACTGACAGACAAAA         CCCCGG-AATG ACCGG CATTACCGGGG         CTTAGGGAAGATTTA  91 38
        nrdD 1199642 .. 1199673 -   -13  -2.60392   CATCCGGTAATCAAT      GCCTGATGCGACGC TGTC GCGTCTTATCAGGC       CTGGAGCAGTTGCCA  84 101
        nrdG 1198646 .. 1198667 - -10.1  -5.52384   CGGGCAGTAAAAAAA           CTGGCGCGA CCTG CCGCGCCAA            ATCTTCATAATAAAA 100 485
HHJ42_RS05690 1196559 .. 1196594 -  -8.3  -2.79796   CGGCATTTGAGCATA    GTGCCTGATGCGACGC TTGAT GCGTCTTATCAGGC-C    TACAGGTGCACCGCA  64 74
         fbp 1193911 .. 1193932 - -15.9  -4.87665   GCGCAGCGATAAAAA           CGCCTCTCC GTGT GGAGAGGCG            CAGGAGATTACGCGT 100 33
         ppa 1188084 .. 1188101 - -12.7  -3.32865   GTAATAATAAAAGCA             CGCCACC TTCG GGTGGCG              TTGTTTTATGCGATG  90 375
        msrA 1181125 .. 1181149 -    -5  -3.77209   AAATACACATTGAAA          GCCGATTC GAAGAAAGT GAACCGGC          ATTTTCAGTGGCTAG  59 251
HHJ42_RS05630 1179670 .. 1179694 - -14.3  -3.73647   GCTATGCAGTAATAA          GACGGCTCCTG ATT CAGGAGCCGTT          GATGTTTCTGGGGGT 100 40
        qorB 1174186 .. 1174229 -  -2.4  -2.73334   AGGAAGCAGACATGA TTGCTCCCGGCATCCCGTC ATTATCA GAGAGGATGC-GGGAGGAT GCCACTTTAATTAAC  40 40
HHJ42_RS05595 1173092 .. 1173110 -  -4.6  -3.83318   TTCTTAATAAGATAA             GATGTATT TTA AATGCATC             TTTAAGGCAAAAGCT  58 86
        ytfE 1171928 .. 1171938 -  -6.8  -3.14132   GGTCTGGCGCAGGAA                 GGTG TGG CACC                 GAAAGCGTTCGCTAA  57 488
        ytfB 1169007 .. 1169024 -  -9.9  -2.94888   AACCCACCGAAATGA             TTCAGGC GACA GCCTGAA              CGTAGCAGGGATCCA  70 159
        tnpA 1166889 .. 1166900 -    -3  -3.57462   TAGCGGATGGTGAAA                GATA TTAA TATC                 AAAAATCGCTCATTA  50 329
HHJ42_RS05550 1165930 .. 1165948 -   -16  -4.72333   AACGAGACGTAAAAA             CGCCGACC ATT GGTCGGCG             TTTTGCTTTCTATTT 100 52
HHJ42_RS05525 1163805 .. 1163822 - -12.7  -5.40072   CGTTTTTCAAAAAAA             GCCCCCT GCGA AGGGGGC              AAAGCAAACTATGGC 100 66
        ulaG 1157859 .. 1157900 - -13.1  -3.47762   AATAGCCAGGAAATA CTACGCCGGATAGCGCGAA CTAC TCCACGCTATCCGGTATAA  ACGACAGATTACAGG 100 34
        ulaR 1156547 .. 1156568 -  -2.3  -3.55801   ATCAATTCTGGCAAA           TCTTGC-TAC AAA GTATGCAGGA           ATTCACTACTTTACG  47 503
        bsmA 1155741 .. 1155752 -  -2.2  -2.82327   TGTGCACAGGTAAAC                GCAT AGGG ACGC                 AAAGCAATGTAAAGC  40 62
        yjfN 1155319 .. 1155330 -  -7.2  -3.30124   TTGTAGGCCGGACAA                GGCG CTCG CGCC                 GCATCCGGCATTGTT  63 60
HHJ42_RS05415 1143922 .. 1143935 -  -4.5  -3.38056   ACGGCGAAAAAAGTA               GCCTGC GGC GC-GGC               AGAAAGCGTTCCGCT  51 397
        queG 1126677 .. 1126690 -  -6.7  -4.28049   TCCAAAATTTGAAAA               GTGCT GTAA AGCAC                AGACCACCCAAGCGG  72 493
        rsgA NONE
         psd NONE
        mscM 1120247 .. 1120266 - -13.6  -3.28924   CAGTTTTGCTTATAA            GCCGGATG GGTT CATCCGGC             CACAAAGACCTTACA 100 36
        frdA NONE
        frdB 1114155 .. 1114173 -  -6.6  -2.73542   TTCAATGCTGAACCA             CACAGCCG GAA CCGCCGTG             CCTTCGCGCAGCATG  55 128
        frdD 1113461 .. 1113481 - -16.1  -4.52589   GGTTTCCATACAAAA            CGGCCCGCC ATA GGCGGGCCA            GATTTACATTGGCGA 100 45
HHJ42_RS05260 1112277 .. 1112294 - -11.3  -4.46581   GAAAAGCGGAGAAAA             GGTCCGA AAAT TCGGACC              CGATGAAATTTTACT 100 36
         blc 1111201 .. 1111224 -   -11  -3.90559   AGCAATAAGCAATAA          CGGTACGACA GCTG TGTCGTGCCG           TTTGTTTTTTCTGCG  86 484
        epmB 1109099 .. 1109120 -    -6  -3.61268   TATGCAACGGGCAAA           GATTAAAC TTCCCT GTTTAATC            AGTTACTGCTGGCGT  62 28
HHJ42_RS05225 1107508 .. 1107531 - -12.4  -4.83246   GCAGAAATAAACAAA          CCCCCAGGCA GAAA TGTCTGGGGG           TTTTTCTTTTGGTCA 100 513
        yjeH 1103632 .. 1103654 -  -5.6  -3.62046   CCAGGGCTTTAAGAA           TTTCGTGCTG ATG CAGCAAAAAA           TGGCGGCGGGTGAAA  58 334
        aspA 1101652 .. 1101671 - -11.4  -5.55769   GCTCACAAGAAAAAA            GGCACGCC ATCT GACGTGCC             TTCTTTATTTGTACT 100 52
        dcuA 1100250 .. 1100269 - -16.4  -4.41348   TCGGCGGGAAAGAAA            GCGGGGCG TGAA CGCCCCGC             GATGGGTCATTACAG 100 35
        cutA NONE
        dsbD NONE
HHJ42_RS05175 1097551 .. 1097563 -  -5.5  -2.75844   TCTGTCAGGTCAAAG                CACCA CCC TGGCG                GCAGCGGGCGAAGCG  50 2
HHJ42_RS05170 1097326 .. 1097345 - -13.6  -4.98531   TTCTGAAACGAAAAA            CGGACCTC CGTG GAGGTCCG             TTGATATGAACTTGG 100 38
HHJ42_RS05160 1094504 .. 1094522 - -12.4   -3.7697   ATATTCAGAAGATAA             CCCCGGCT GAC AACCGGGG             AAGGGGGCATTAACA 100 97
HHJ42_RS05135 NONE
HHJ42_RS05115 1082932 .. 1082951 -  -3.5   -2.5919   CAGGACAGTAAGGCA            CCGCC AATCGAAAGA GGCGG             CAACAGATATGCCTG  42 182
HHJ42_RS05075 1074361 .. 1074382 -    -3  -3.52079   GAACACGGCATACAA           TGAACACC CGGAGT GGTTTTCA            GGGCTTGTCTCCGGG  49 105
HHJ42_RS05060 1072034 .. 1072049 -  -4.6  -2.84687   CTAACGATCAGGATA              GGGAGT AACG ACGCCC               GGTTTTTGTTTATCA  48 88
HHJ42_RS05055 NONE
        eutJ NONE
HHJ42_RS05045 NONE
HHJ42_RS05040 NONE
HHJ42_RS05035 1068925 .. 1068935 -  -3.2  -3.84996   AATACACAAGCTAAA                 GACA TGA TGCC                 CCCTGAAATGGACTG  53 48
        tdcD 1067462 .. 1067474 -  -2.7  -3.08283   ATAACGACCTCAATA                TTTCC GAT AGAAA                GAAAACGTGCACAGA  43 284
        pduA 1067171 .. 1067184 -  -3.8  -3.15544   CTTTATTGTTATTAA               CCGA TAGCCT TCGG                TAGAATTTTTTCCAC  48 8
        pduB NONE
HHJ42_RS05015 NONE
HHJ42_RS05010 NONE
HHJ42_RS05005 NONE
HHJ42_RS05000 1061238 .. 1061263 - -12.7   -3.6053   TCGTGGAGAAAGTAA         CGGGCTATATA TTGA TACATAGCCCG          TCTGGTATTTACGAC  95 34
HHJ42_RS04995 1060250 .. 1060264 -  -4.9  -3.15249   TACATCTTTTATTAA               CCGCC GATAT GGCAG               TTAAAACCTAAGGAT  52 7
HHJ42_RS04990 1059164 .. 1059186 - -10.6  -5.24796   CGCACATAACAAAAA           GCCAGCAG GCAGACA CTGCTGGC           TTTTTGTTATGGCGG 100 43
HHJ42_RS04985 NONE
HHJ42_RS04980 1057251 .. 1057265 - -11.4  -4.27117   CTGCCACAATACAAA               CGCCAG TTA CTGGCG               ATACGAATGGAATGA  93 390
HHJ42_RS04975 1055403 .. 1055417 -  -2.9  -3.14132   TGCGCTCCGGATGAA               TATGA TGATC TCATA               TCAGGAACTTGTTCG  45 426
HHJ42_RS04965 1054344 .. 1054355 -  -5.8   -2.7927   AAACACATCGAATCA                GCCT ATTT AGGC                 TATTTTTTCCACCAT  50 62
HHJ42_RS04955 1052243 .. 1052253 -  -3.2  -2.50545   CTCCTATAATAAATT                 CAAC TGT GCTG                 CGCGTCGTCGGCTTA  42 38
HHJ42_RS04950 1051629 .. 1051658 - -10.1  -5.63103   TGTTAAGCAAAAAAA       TGCCGCGATAA AGAAATTG TTACCGCGGCA        GCGTCATAGCAATTT 100 43
HHJ42_RS04900 1042665 .. 1042679 -  -5.7  -3.58522   ATCATGATGTTGAAA               GGATG TGTCG CATCC               GGATAATCAGGAATA  59 148
HHJ42_RS04895 NONE
HHJ42_RS04890 NONE
HHJ42_RS04885 1040806 .. 1040833 - -19.2  -4.61873   CGGTATAAACGAAAA        GGCCGCGTCTCC CGGA GAAGACGCGGCC         TGATGGATGAAATGA 100 47
HHJ42_RS04880 1039895 .. 1039907 -  -3.3  -2.84636   AATGAATGGAAGAAG                CCCCG GGG CAGGA                ACAGATGTGAGTCAG  44 65
HHJ42_RS04875 NONE
HHJ42_RS04870 NONE
HHJ42_RS04865 1038480 .. 1038499 -  -9.3  -2.86164   GGTTTAACGATGACA            GGTCAGC CGGCGC GCTGACC             GGTTTCGGTGAAGAT  67 121
HHJ42_RS04860 1038018 .. 1038039 - -10.1  -2.55811   GAAAAATGGAAAAGT           GGCGTGGTG AAAG CACCAGGCC            GGAGCAGAAGGTTAT  70 50
HHJ42_RS04855 NONE
HHJ42_RS04850 NONE
HHJ42_RS04845 1036842 .. 1036864 -   -12  -4.65153   GCAGATAAATGAAAA           CGCCAGCC GTGTTCA GGCTGGCG           TCAGTGGAATGAAGT 100 67
HHJ42_RS04840 1036076 .. 1036095 - -13.6  -4.98531   TCCTGAAACGAAAAA            CGGACCTC CGTG GAGGTCCG             TTTATATGAATTTGG 100 170
        cadC 1033858 .. 1033878 - -11.2  -3.39664   ATGTAATAAAAATTA            TGCGGCAA ATAAA TTGCCGCA            ACATATTATACCAAC  83 100
        cadB 1032196 .. 1032235 -  -2.7  -5.08824   TCTCCAGGTAAAAAA  GGCCCCTCCCAACACAT GGGACA AAATGAAAGGAGGAGCC   TCGGAAAATACTTTT  73 43
        cadA 1029991 .. 1030012 - -14.5   -5.1861   CTTATGAGCAAAAAA           GGGAAGTGG CAAG CCACTTCCC            TTGTACGAGCTAATT 100 39
        dtpC 1028417 .. 1028428 -  -4.4  -4.25016   ATCACTAATAAATAA                CCAT CAAA ATGG                 TTTAAATGACTTATT  64 107
        lysS 1026712 .. 1026743 - -18.2  -2.71364   GGATTTGCGGAATGA      CGAACGAAGCAGTC GCCT GACTGCTTCGTTCA       TTAAAGTGAAATTTA 100 38
        dcuS NONE
        dcuR 1022657 .. 1022667 -  -5.4  -3.90048   TTGTGGGTAAAAATA                 CACA TAA TGTG                 GGTGACATAATAGTT  63 227
        dcuB 1020919 .. 1020950 -  -8.7  -4.13767   TTTGTTATTCGAAAA      TGGCGTGCCGC GTAGTCACGG GCGGCACGCAA       AGTGCATTTATAAGA  78 33
        fumB 1019180 .. 1019199 -  -5.6  -3.70689   TACAATCGCAAAAGA            GGTGGCCC AGGG GGATCACC             TGGCAGCATGCTGCC  59 60
HHJ42_RS04770 1018329 .. 1018354 -  -7.6  -4.18494   TATTCTTACGGAAAA         TCGCGACCGTG TTTAC CACG-CCGCGA         TGATGGACCCGCATA  76 132
        melR 1015801 .. 1015821 -  -6.3  -4.58685   AAAGCGCGTGAAAAA            CAAACATTT TTG AAATATTTG            TTTTTATAAACAATA  76 122
        adiA 1013316 .. 1013334 -  -8.8  -5.85178   AACAGGCAAAAAAAA             GCGCGG GGTGGGA CCGCGC             AAAAAGCATGACATT 100 143
        adiY 1012226 .. 1012236 -  -3.2  -4.07968   GAAGACATAATTAAA                 CTCC TGC GAAG                 GCGAGCTTCGTGACA  57 144
        adiC 1010829 .. 1010854 - -14.9  -3.78998   GCAAAGCAAAATTAA         GCCAACCTTAA GTTC TTAAGGTTGGC          TTTTATGTTTGCTTG 100 52
        eptA 1009128 .. 1009139 -    -3  -2.93073   CGTCTTCAACAATCA                GAAT TTTC ATTC                 ACTCACTCTCCTGCA  42 20
        basR NONE
        pmrB 1007030 .. 1007040 -  -6.8   -3.5594   AATCGACCGTTGAAA                 GGTG CGA CACC                 AGCGGCGTCAGATAT  61 353
HHJ42_RS04705 1001490 .. 1001522 - -14.2  -3.15708   ACAGATGAGAGGGAA      GCCTGATAAGACGC GGTCA GCGTCGCATCAGGC      AGTCGCCACCGTTGC  95 87
        yjdN 1000954 .. 1000977 -  -4.5  -2.80994   GGGAATTCGATGACA          GTGCGGGAGG GCGGG CCTCCCGG-C          GGGTTATTGCGTTGG  47 29
        phnC NONE
        phnD  998942 ..  998953 -  -5.8  -3.30124   CTGTAGGCCGGATAA                GGTG CTTG CACC                 GCATCCGGCATCAAC  56 91
        phnE NONE
        phnF NONE
        phnG NONE
        phnH NONE
        phnI NONE
        phnJ NONE
        phnK  993664 ..  993675 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG TTTA CGCC                 GCATCCGGCATCAGC  63 41
        phnL  992911 ..  992923 -  -4.7  -3.16553   ATAATCATGAAGAGA                CTCCC ATT GGGTG                CAGGCGGTCGGCGAC  50 2
        phnM NONE
        phnN NONE
        phnO NONE
        phnP  989581 ..  989610 -  -4.3  -3.09289   GATTACGGCAATAGA       GCAGCGGAGAAAT TGAG ATTCATCCACTAC        TTGCATGGATGAGTA  49 444
        alsR  987871 ..  987886 -  -6.8  -3.13475   TAAGGGGAGAGGTAA              CTCCGC GATG GCGGAA               TTACCTTTTTCTTAT  59 37
        alsB  986764 ..  986778 -  -8.6  -2.91264   CCCGCCATCGATATA               TATGGC GTG GCCATA               AATAACCTCTCTGCA  65 151
        alsA NONE
        alsC NONE
        alsE NONE
        alsK  982614 ..  982634 -  -3.3  -3.04157   TAATTATTATATATA            TTGTACC TGTCGTT GGCACAA            CGGGACATTGCGCTA  45 58
HHJ42_RS04580 NONE
        mdtN NONE
        mdtO NONE
        mdtP  975327 ..  975352 - -14.1  -4.10552   CGTGACGAAACGAAA         TACCGCGTGAC AGCC ATCACGCGGTA          GACATTTTATTTTTT 100 32
        fdhF  972934 ..  972959 - -11.3  -5.64274   GTATGTATAAAAAAA         TCCGGAAACAGA GAG TC-GTTTCCGGA         TTGATACAAAGGCGT 100 80
HHJ42_RS04550 NONE
HHJ42_RS04545 NONE
HHJ42_RS04540 NONE
HHJ42_RS04535  967430 ..  967466 -  -3.1   -4.7153   AAAGAATGTCAAAAA    CAACATCAAAGTGATAA TTT TTTTCATTTTGATAATG    AAGTTTGGTAGGGGA  66 126
HHJ42_RS04530  966712 ..  966741 - -10.7  -3.30124   TTGTAGGTCGGATAA       GGCGTTTACGCCG CATC CGACATCAACGCC        TGATGCGACGTTTGC  80 51
         acs  955472 ..  955504 - -14.1  -2.52464   CCGTTGCCGAATGTA      GGCCGGATAAGGCGT TAT ACGCCGCATCCGGCA      ATCAATGCCTGATGC  87 193
HHJ42_RS04480 NONE
        actP  953296 ..  953319 - -13.2   -4.1552   GATGTTCTGAAGAAA          TTCCCCGATC AAGC GACCGGGGAA           GGGGAGAGATTAATG 100 35
HHJ42_RS04460  951175 ..  951212 -  -6.1  -3.38604   GAGGAAAATCAGTAA   TCTGCATGGTTGGCGGG CGAG CCCGCCAACCCGACTTA    CTCTGGCGTTAACCA  59 23
        soxS  946574 ..  946597 - -12.4  -2.71731   TGGATGGGGTAATTA          CCCGCGCG GGAGTTAA CGCGCGGG           CAATAAAACTACAGG  82 34
HHJ42_RS04430  944278 ..  944300 - -13.5  -5.28176   GCCAGCCATAAAAAA           GAAGCCTCC GTTAT GGAGGCTTC           TACATATCAAGTCAA 100 32
        uvrA  940184 ..  940198 -  -7.8  -4.07568   CTGTTTCGCTGAAAA               CCAGCC CGG AGCTGG               CGGAGCTGCTACGTC  74 422
HHJ42_RS04400 NONE
HHJ42_RS04395  935332 ..  935345 -  -2.3  -3.16191   TTACATCCTCAGGAA               TCAGC ATTA GCTGG                ATGATTCTGGTCGAT  44 18
HHJ42_RS04340  919844 ..  919864 - -12.6  -5.00267   AATTATAAAAAGAAA            GGGCTTCC CAGGT GGAAGCCC            TATTTCTTTTATGGA 100 34
         zur  917371 ..  917390 -  -4.3  -4.77567   ACGTTCAGAAGAAAA            GTGAACG TACTCT CATTCAC             AACCTAACGATGAGG  73 300
        plsB  912078 ..  912095 - -11.3   -5.1101   TGATGATGTAAAAAA             GCCGGAT GATC ATCCGGC              TTTCTTCTGGGTTGC 100 150
        malE  905056 ..  905067 -  -7.2  -3.30124   TCGTAGGCCGGATAA                GGCG TTTA CGCC                 GCATCCGGCATTTCA  63 46
        malF NONE
        malG  902397 ..  902414 - -12.7  -5.52384   GCGGGAGTAAAAAAA             GGCGCTC CGTG GAGCGCC              GAATAACAGTCACAA 100 96
HHJ42_RS04250  901453 ..  901480 -  -8.5   -3.6215   CTAAGTCATGGGAAA        GGTGCCAGT TTTCGCACTC ACTGGCACC         TTCATTCTTAATGGC  72 33
        lysC  893555 ..  893591 - -13.1  -5.24416   TAATGACAAGAAAAA    CAATACGGCCCGAAATA ATG TCTTCCGGGCCATACTG    TGTTTACTCAAATAA 100 29
HHJ42_RS04215  893004 ..  893024 -  -4.5  -4.61527   AAAACGGCGGAAAAA            GGCGGTCGC CCG GCGTCCAAC            GGTAAGCGTTTTACC  72 71
HHJ42_RS04205 NONE
HHJ42_RS04200 NONE
HHJ42_RS04195 NONE
HHJ42_RS04190 NONE
HHJ42_RS04185 NONE
HHJ42_RS04180  887387 ..  887412 - -12.5  -2.70932   CCTCGTGTTGAACGA         TGGCCCCGACG GTTG CGCCGGGGCGA          AGAATCAGGACAGGA  82 30
HHJ42_RS04175  885872 ..  885883 -  -5.8   -3.5812   GACTGATGACAAACA                CAGG ATTG CCTG                 ATGCGCTACGCTTAC  59 278
        pepE  885039 ..  885059 - -11.2  -3.45742   GCACTATGAACAAGA            TGCCGGAT CATGC ATCCGGCA            ATTCACTTAAAAACG  85 32
        iclR  877173 ..  877189 -  -4.3  -3.09327   CGACGCTATTGAAGA              GTACGGC AAC GCCATTC              GCCAGCTTGCCGCTG  48 431
HHJ42_RS04120  870564 ..  870584 -  -9.6  -5.05228   ATCAAATTAGAAAAA            CCCCGGTC AATAA GGCCGGGG            TTTTTTGCATATCAA  93 513
        purH NONE
        purD  861963 ..  861990 - -10.4   -4.4009   CGGCACTGGAGAAAA        CGGGCGGCAACA AAAC CGAAGCCGCCCG         TCAGTTAGGGATCAC  90 71
        zraP  858219 ..  858238 -  -4.3  -2.62616   GCAGTGGCGATACCA            CCACGCGA GAGTA TCGC-TGG            CAGGGCGATAACCTT  45 471
         rsd  853703 ..  853718 -  -8.2  -3.15008   TCCGACAAGAAATTA              GCCCCA CAAA CGGGGC               GTTGAATGTAAATTA  64 60
        thiC NONE
        thiE  850902 ..  850914 -  -4.8  -2.88768   GCCAAGACCAATAAT                CAGC ACCTG GCTG                TCGAGCAGTTTTTGC  50 101
        thiS NONE
        thiG NONE
        thiH  847939 ..  847952 -  -9.5   -4.8384   CAAATAACGTAAAAA               CCCGC TTCG GCGGG                TTTTTTTATGGGTGT  91 226
        coaA  832511 ..  832528 -  -9.1  -4.80417   CAGAAAAATAAGAAA             GGGGAGC ATTA ACTCCCC              TTTAAATTATTTGCG  90 32
        trmA NONE
        sthA  814954 ..  814980 -    -5  -2.78216   TATCTGCATGAAGCA         CAGACCCACCAG TTA CTGGCGCAACTG         GACAGCGGCAAACTC  46 518
        argE  806691 ..  806704 -  -6.7  -3.30124   GTGTAGGTCGGATAA               GATGC GCAA GCATC                GCATCCGACATTGTT  61 52
         ppc  803739 ..  803760 - -13.7  -4.41206   AAGTATTTCAGAAAA           CCCTCGCGC AAAA GCACGAGGG            TTTGCAGGAGAGGAA 100 43
HHJ42_RS03820  801777 ..  801821 - -20.9  -3.53811   CGGATGCGGCGTAAA CGCCTTATCCGGCCTACCG CCGCGAT CTGTAGGCCGGATAAGACG CGTCAAGCGTCGCAT 100 66
HHJ42_RS03815  800617 ..  800629 -  -9.1  -2.82834   TAGCGGACGAGGATA                TCCGC CGG GCGGA                TGTTGCGCTGTTAAT  63 181
        ptsP NONE
         fsa  792360 ..  792370 -  -3.2  -2.82623   TGCGGTCCATAATTA                 CTCC TTT AGAG                 ATGAGTAGTGCCAAA  43 20
        gldA  791067 ..  791081 -  -3.5  -5.63504   AAGCGGATAAAAAAA               CACCC GAACA AGGTG               GAAGTTTCAGATTAC  95 195
HHJ42_RS03770  789883 ..  789897 -  -4.2  -4.25104   TCTCTTCGATGAAAA               GTGCCA TGC TGGCAA               TCCTCTCCGGTGTGA  62 486
HHJ42_RS03745  782559 ..  782571 -  -3.3   -4.9138   ATTATTTAAATAAAA                GGCAC ATC GTGTC                TTATTTTATGTAAGC  72 195
HHJ42_RS03740 NONE
HHJ42_RS03735 NONE
HHJ42_RS03730  778156 ..  778181 - -16.3  -3.10164   GTAGTGATTATTGAA         CAAAAGCTGGC AGTT GCCAGCTTTTG          TTGTCACCCCTAAAC 100 206
        metJ  773912 ..  773934 -  -2.6   -5.1675   CCATGTATGAAAAAA          GCGGC-TGG TTAACT CCGCGCCGC           TCTTTTCCGCTTTAG  73 37
HHJ42_RS03710  773237 ..  773250 -  -9.5  -5.02074   GGATTTCCGAAAAAA               GCGCC GCAC GGCGC                TTTTTTTGTGCCTGA  93 53
        priA NONE
        cytR  769380 ..  769402 -  -3.2  -3.06796   CGCCATGTTACTTAA           GCGGCGGGCC TTT GACCAGTCAC           GGCAGTCTTAAAGGT  45 46
        ftsN  768315 ..  768334 - -13.6  -4.05991   AATACAGAGTACAAA            CCCCGTAC AAAA GTACGGGG             CATAATGCAATTATA 100 63
        hslV NONE
        hslU  766360 ..  766377 -  -9.1  -5.06816   ACGCGCCAATAAAAA             TGGGGCC TTTC AGCCCCA              TCAAACAATGATGAA  93 56
        menA  765390 ..  765404 -  -5.8  -3.08032   CTGTTGGCAAAATCA               TCAATT GTT AATTGA               TATTTGTCAGTTATG  52 36
        rraA  764814 ..  764829 - -10.4  -5.31456   GTAACGCAGAAAAAA              GGCACC TTGC GGTGCC               TTTTTTATCATTCAA 100 33
        glpF NONE
        glpK  761675 ..  761688 -  -8.1  -3.30124   TCGTAGGCCTGATAA               GACGC GCAA GCGTC                GCATCAGGCAATCAT  65 43
        glpX  760483 ..  760504 - -13.1   -5.7946   CTCCGAACAAAAAAA           TTCCAGTCC CGAA GGACTGGAA            GGCTCAATCGATCAA 100 46
         fpr  759419 ..  759441 - -10.8  -3.41024   CCCTGCAACAGAAGA           TATTCTTCAA TTG TTGAAGAATA           AGTCGGATAACAAGC  76 266
HHJ42_RS03625  757500 ..  757520 -  -5.4  -3.41962   GCGAATAAAGGAAGA           TGGCCGCCC CGCA GGGCAGC-A            GGTCTGTGAAACAGT  56 76
        tpiA  756664 ..  756686 - -13.5  -3.56972   AGTTTAGGAAAGTAA           GTGCCGGAT ATGAA ATCCGGCAC           CTGTCAGACTTAAGC 100 35
HHJ42_RS03455  728228 ..  728240 -  -3.3  -4.30576   TGCTCATCAGTAAAA                CTCCA GAA TGGTG                GATGTCAGCGGGGTG  62 4
HHJ42_RS03450  727164 ..  727179 - -11.8  -5.00616   GCGGGGTGTAAAAAA              GCCGCC CGCA GGCGGC               GATGTTCAGCCGTTG 100 31
HHJ42_RS03395  719691 ..  719703 -  -3.5  -4.18763   AACAAATGGTGAAAA                TATAA TGT TTATA                GAGTGTTAACCAGTC  60 31
HHJ42_RS03390  718428 ..  718439 -    -3  -3.64933   GCAATGGCAAAAAAG                TTCA TCGT TGAA                 GCTATTGAGTAGTAG  51 245
        cpxR  716987 ..  716997 -  -5.4  -2.71144   CATGCTGCTCAATCA                 TCAG ACC CTGA                 CGCTGTTCGCTATCC  50 153
        rhaT  711531 ..  711564 -  -6.7  -3.55444   TGTTTACCCGGGAAA     CCGGGATGACGCC CAGCCAGT GGCGTCATCTCAA      TTCGCAGAAAGATTA  62 38
        rhaA  706718 ..  706749 -   -13  -2.60392   CATCCGGCAATCAAT      GCCTGATGCGACGC TGTC GCGTCTTATCAGGC       CTACAACTATTGCCG  84 84
        rhaD NONE
        rhaM  705165 ..  705193 - -10.2  -2.83403   TTCTTCTGATGAAAG        GGCGGTGCTGGA TATTT TCCGGCACCGCA        ACTCATTAAGGCAGG  71 31
        fdnG NONE
        fdoH NONE
        fdoI NONE
        fdhE  696009 ..  696035 -  -3.3  -4.58213   TAAGGAATGACAAAA        GTTTTTT-TATT CATG AATATAAAAAAC         CAGATGCCCTTATTC  64 209
HHJ42_RS03265  692972 ..  692990 - -10.4   -4.1899   TTACTTGACTGAAAA             GGTTTTCA ATC TGAAAACC             TTTTCTGGGCCCTGG  85 48
        yihU NONE
        yihT NONE
        yihS  684983 ..  685013 - -11.9  -3.67775   ACCTTTATTGAATAA       CGACATACCCGGC GTGCA GCCTGATATGTCG       TTTTTTTAGTCAGTT  89 39
HHJ42_RS03215 NONE
HHJ42_RS03210 NONE
        yihQ NONE
HHJ42_RS03200  679522 ..  679535 -  -9.5  -3.30619   AATCACTCCTTATAA               CGCCC CGCA GGGCG                TTGTTTATTATAATT  74 39
HHJ42_RS03195  678059 ..  678073 -    -7  -2.64472   CATTTTTTAAACGTA               GGGAGG CCG CCACCC               ATCAGGATGGAAATA  55 55
        ompL  677307 ..  677326 -  -7.8  -4.57837   ATATCTGTGTAAAAA            GCCGCTTA AATA TCAGCGGC             TTTTTACATTTTCAT  82 42
HHJ42_RS03185  676285 ..  676306 - -13.1  -4.06419   TTCTGTGATAAATAA           TGGGAGAGA TGAC TCTCTCCCA            AAAATGTTATTTATT 100 36
HHJ42_RS03180 NONE
HHJ42_RS03175 NONE
HHJ42_RS03170 NONE
HHJ42_RS03165 NONE
HHJ42_RS03160  671576 ..  671593 - -11.3  -5.64274   TTAGTCATAAAAAAA             CCTGCCA GCGA TGGCAGG              TTTTTTTGCTTTTGT 100 58
        glnA  667867 ..  667884 -    -7  -5.28176   TTGACGGAGAAAAAA             GCCCAT GCAGAG ATGGGC              TGAAAGTTTCCACGG  87 87
        glnL NONE
        glnG  665246 ..  665269 -    -6  -3.93038   TATCGGAACAGTAAA          GCGCAAAATA CCAG CAATTTGCGC           TCAATAATCAATCTT  66 58
        yshB  665010 ..  665042 -   -12  -2.60392   CATCCGGCAATCAAC      GCCTGATGCGACGC TGGTT GCGTCTTATCAGGC      CTACGACTTTCTCCG  79 63
HHJ42_RS03120  661517 ..  661543 -  -7.2  -2.55392   AATCTATTGAATTTA         CGGGCCGGATAC GCC ACATCCGGCACA         AGCATTAAGGCAAGA  57 44
HHJ42_RS03110  657062 ..  657095 -   -14  -3.73042   TTGTTCATTAAAATA     CTCACTCGCCTCTG CTCATT CAGAGGCGAGTAAA      ACTTACTTTTCCTGC 100 28
        mobA NONE
        mobB  652247 ..  652266 - -13.6  -3.19205   CAAATTAAGCGAAGA            GCCCAGTC GGAA GACTGGGC             TTTTTTGCGTTGGTG  93 93
        fadB NONE
        fadA  638945 ..  638963 -  -9.5   -5.4251   CTGAGATATAAAAAA             CCCGCCC CTGAC AGGCGGG             AAGAACGGCAACTAA 100 267
        rfaH  635979 ..  635992 -  -4.5  -2.52623   TGGCGTGGAGAAGAT               GCC-GC ATG GCTGGC               TGCCACCACGGATGC  44 71
HHJ42_RS02965  627969 ..  627990 -  -3.7  -4.09685   GGTGATTCGCCAAAA           CGCCAT-GCC CGA AGCGATGACG           TTCCCCAGTCCAGGG  59 89
HHJ42_RS02955  626046 ..  626073 -  -3.4  -4.07568   TCGCTGGTTTTAAAA        CGCACCATTCCGA GGC TGGGAAGGGTG-G        TTAGTTCAACCGTGC  57 357
HHJ42_RS02945 NONE
HHJ42_RS02940  623350 ..  623371 - -13.7  -5.95539   GCTGAAATAAAAAAA           CGCTCCCCA ACTT CGGGGAGCG            ATATCAGTTATTGAC 100 33
HHJ42_RS02930  621419 ..  621437 -    -6  -2.89935   AAAGAGTGGCATACA             GCAACAAA TTT TTTGATGC             TGTATGGTTTTGAGA  55 97
HHJ42_RS02925 NONE
HHJ42_RS02920  619673 ..  619706 -  -5.3  -2.90992   AATTCGGGCAAAGCA     TCCCCGTGTAGCCC CATAAAC GGGCTACG-GGAGA     AAAGGTTGAAATCAA  50 37
        fdrA NONE
HHJ42_RS02910 NONE
        arcC NONE
HHJ42_RS02900 NONE
HHJ42_RS02895  613986 ..  614011 - -10.5  -2.74144   TGGTCAGTGGTAAAG         TGGCTGAATCT CTCC AGATTCAGCCG          TAATCATTGCCTGAG  71 53
HHJ42_RS02890 NONE
HHJ42_RS02885  611991 ..  612016 - -11.9   -3.3506   GCTAAACCTGCACAA         GGGGTGAAAGG ATGA CCTTTTACCCC          TTGAAACGGGAGCCA  85 19
         hcp NONE
HHJ42_RS02860  605503 ..  605524 - -13.1  -3.44229   ATTGCAGTACGATAA           TGGCTTCCA GTAC TGGAAGCCA            TTTTGCATGAGTGCC 100 454
        metR  601934 ..  601952 -  -2.3  -4.41241   GAAATGCGCAGAAAA             TGCCGCA AACCA CGCTGCA             ATGGGGCATTCTGGT  60 205
        rhtB  598671 ..  598700 - -14.3  -3.29471   GCGTCATCAGAGTAA       GTCGGATAAGGCG TTTA CGCCGCATCCGAC        ATTATTTTCACGCAT 100 33
HHJ42_RS02810  594485 ..  594497 -  -4.8  -3.06261   TTTTAATTGGTAACA                GCAG TTTAC CTGC                TTTTATGTCTTCAAC  51 36
        rarD  593515 ..  593540 -  -8.3  -3.07043   GTCAGCATGGCAATA         TGCCCACTCTC ATGC AAGAGTCGGCA          TATTTTTTCAGAATA  66 51
HHJ42_RS02795  591898 ..  591925 - -12.8  -3.11024   GGTTGTAATATAAAT        GCCGGGTAAAGA TTGT TCTTTATCCGGC         TTATTGCTGAAAATT  83 26
HHJ42_RS02785 NONE
HHJ42_RS02780  588378 ..  588402 -  -4.1  -3.14211   ATGTCGCTGGATGAA          GGCGGGCGTCT GGA AGAAGAACGCC          GTCTGGCCTACGTTG  47 444
HHJ42_RS02745 NONE
HHJ42_RS02740  579767 ..  579796 - -11.5  -3.14211   ATTTTTCGTGATGAA       CGTGCCGGA-AAGC GAG GCTTATCCGGCATG       CAATCTTAGCGGAAA  81 399
        hemC NONE
        hemD NONE
        hemX NONE
        hemY  572678 ..  572705 -  -2.5  -4.04318   TTTATATATCAGAAA        GGCCCCGGAGG TGCTTG CCTCCGGGTGA         GAAAGAGCTACTGTG  56 33
        aslA  570293 ..  570311 -  -2.3  -5.37865   TGAATAAGTAAAAAA             GTAGCCA TTTTG TGGCCGC             CTGCGGTTGATTGTC  77 93
        rhlB NONE
        gppA  548615 ..  548630 - -10.4  -3.90922   ACGCTGTGTAAAGAA              CGCCGT CAGT ACGGCG               AACTGGTGCGCCCGG  81 236
        ppiC  545905 ..  545915 -  -4.6  -3.61371   AAACCGCATTCGAAA                 CCGC GCC GCAG                 TATGAAGGCAAAATC  55 515
        ilvY  543758 ..  543775 -  -7.7  -3.21099   CTTGGCGATCATGAA             CCGGATT TTGA AACCCGG              CTGAATGAACTGGGC  61 94
HHJ42_RS02530  535401 ..  535413 -  -6.2  -5.15167   GACGATTAATAAAAA                GGGC GAAAT GCCC                TTTTTTTATGTCAGT  83 31
        hdfR  534010 ..  534029 - -10.8  -3.00946   CCCTGCCAGAAATCA            TCCTTAGC GAAA GCTAAGGA             TTTTTTTTATCTGAA  76 94
HHJ42_RS02485 NONE
        mdtD NONE
        ravA NONE
        viaA  514993 ..  515011 - -10.2  -2.71712   GCTGCGCGGTGAAAT             GCCGCAGA CCA TCGGCGGC             GGTATCGGGCAGTCT  67 144
        asnC  513438 ..  513460 -  -8.5  -2.92102   ATATCTGCCATAAAC          CGCCAC-CTT TATT AAGAGTGGCG           TATTGTACGCTGTGA  65 88
        mioC  512905 ..  512919 -  -7.2  -2.66977   CACAACTCAAAAACT               GAACAA CCG TTGTTC               TTTGGATAACTACCG  57 96
        mnmG NONE
        rsmG  509910 ..  509947 -  -5.2  -5.52384   TGCTTACCAAAAAAA  GCCACGTT-A-TCTTGTTG ATA CAA-AAGAGTGAACGTGGC  GTTAAATGTAACCAG  93 113
        atpI NONE
        atpB NONE
        atpE  507922 ..  507934 -  -3.3  -3.88331   TTTAAATAAAAGCAA                CGCTT ACT ACGCG                ACAGCGAACATCACG  55 19
        atpF NONE
        atpH NONE
        atpA NONE
        atpG  504385 ..  504400 -  -2.4  -3.56366   AATAACCTGTTTAAA              CCGCGG CGGC CCCCGA               GACGATCTCGGTGAG  47 5
        atpD NONE
        atpC  502487 ..  502508 - -12.3  -5.42862   ATACGCGTAAAAAAA           GCCAGCCTG TTGC CAGACTGGC            TTTTGTGCTTTTCAA 100 48
        glmU  500789 ..  500801 -  -6.9  -2.63596   CCTCATCCCATATGA                CCGGA TTA CCCGG                CCAGAATTACTTTTT  55 32
        glmS  498790 ..  498809 - -11.4  -5.19251   TAACAGGAAGAAAAA            TGCCCCGC TTAC GCAGGGCA             TCCATTTATTACTCA 100 34
        pstS  497472 ..  497483 -  -7.2  -2.82635   AGTTTTATTAGTACA                GCGG CTTG CCGC                 TACTGTCTTTAATAT  58 6
        pstC NONE
        pstA  495501 ..  495512 -  -7.2  -3.30124   CCGTAGGCCGGATAA                GGCG TTTA CGCC                 GCATCCAGCAAAGTG  63 41
        pstB NONE
        phoU  493884 ..  493914 - -13.6  -3.63054   TAAAGTTATATATAA       CAAATCCCAATAAT TGA ATTATTGGGATTTA       CTTGGTGAATTATTT 100 35
        bglG  492724 ..  492741 -  -4.1  -2.91328   AACCTGAAAAAAACG             GCCTGAC GTGA ATCAAGC              AATTTTTTTCAGGTT  46 86
        bglF NONE
        bglB  489332 ..  489357 - -12.7  -2.64572   GAAAGAATTAACGCA         TCGCATCCAGA CTGT TCTGAATGCGA          CGATATTTAAGGTGC  81 49
        bglH NONE
HHJ42_RS02305 NONE
HHJ42_RS02300  485706 ..  485733 - -10.6  -3.22668   AAATGTTGGAGAACA        GGCCGGA-GCGTA ATT CACACATCCGGCC        TTATTTTTAAGCTTA  78 38
        adeP  482910 ..  482934 - -12.2  -5.65927   GATCTAAATAAAAAA         CCCGCCA-GCA ATCA TGCATGGCGGG          TTTTTAACGCGCTAT 100 46
        dnaA NONE
        dnaN NONE
        recF NONE
        gyrB  465231 ..  465251 - -16.9   -5.1356   TTGCAGGAATAAAAA            GGGCGGAGA TGA TCTCCGCCC            TTTTCTTATAGCTTC 100 162
HHJ42_RS02195  464714 ..  464744 -    -4  -4.19258   ACACCCGAGGGAAAA      GGGGGATGCAACGC GCATT GCGT-GC-TCCCCT      TTTGCTTAGCGGAAA  62 31
        yidA  463615 ..  463632 -  -4.1  -2.80796   GCGGATTACTCAAAC             GTGATGG TTTT CCATCAA              CCCTTTACGGTGGGA  43 216
        dgoR NONE
        dgoK NONE
        dgoA NONE
        dgoD NONE
HHJ42_RS02160  458046 ..  458067 -  -9.4  -4.87807   GCAAGATAGTAAAAA           GCCGATGC CTGACC GCACCGGC            TTTAAGAAAGTGGAT  91 80
HHJ42_RS02150  455656 ..  455666 -  -2.4  -3.24232   TGTTCCGCAAAGACA                 GCTC AGT GCGC                 TCGCGCGTTGAAAAA  43 107
        ibpA  454664 ..  454688 -  -5.6  -2.80796   GGCGAGCATGGAAAT          GTCAGGCCGC GCCAG GCGGCCTTAG          GGAATTAGTTGATTT  50 30
        ibpB  454117 ..  454137 - -14.7  -6.18768   AAAAGACAAAAAAAA            GCCCCACCA GAA TGGCGGGGC            AAAGAGAATAGCTAG 100 41
HHJ42_RS02130  452253 ..  452287 -  -7.1  -3.52906   TGATGTTCAGAAATA    CCAGGCGGAGT-ACCA TTTA CGGCGACTCCACCGGG     AAAAGAGTTAACCGA  65 33
HHJ42_RS02120 NONE
HHJ42_RS02115  447924 ..  447956 - -13.5  -3.53012   GTTGCTCCTTGTAAA      CTGTTCCTCGCCGAA AAA TTAGGCCAGGAACAG      CAATAATGCATCAGA 100 36
HHJ42_RS02110 NONE
HHJ42_RS02105  447196 ..  447212 -  -2.2  -2.80016   CTTCAGCATCAATGA              CCTGAC TTCCT GTCATG              CGACTCTCTCAATAA  40 21
HHJ42_RS02100  446326 ..  446337 -  -2.2  -2.77344   GGACGTCCCAATAAG                CGCT TCTC AACG                 TTGATGTGGCAGTCG  39 402
        ivbL  444971 ..  444995 - -10.7  -4.99134   AGCTTAAACGAAAAA         CCCCGCCCGG TTTGCG CCG-GCGGGG          TTTTGGAATCGTGTG 100 53
        ilvB NONE
        ilvN  442888 ..  442912 - -12.2  -4.63218   TGGCGGGTAATAAAA          CGCGCTTACC TTAAC GATAAGCGCG          ATGTTGTTCAAGCCT 100 48
        uhpA NONE
        uhpB NONE
        uhpC  439431 ..  439453 -    -4  -3.17928   ATATGAAGTGAAAAG           GTGAGATGCA TCA CGCTTCTCGC           GGTGTCTGGGCGTTC  48 13
        uhpT  437875 ..  437893 - -13.1  -6.22691   GAATAATAAAAAAAA             GCCCGGC GTCAT GCCGGGC             AAAAGTCACCAGTTA 100 44
        adeQ  434537 ..  434563 -  -2.4  -2.65264   GCATTATCCAGATCA         TGAGTTCT CCTGCGTAATC AGAACTCA         TGATATCTGGAAACC  39 52
HHJ42_RS02045  434001 ..  434013 -  -4.1  -2.52156   ATCGAAACGGAACAG                GGCAA AGA TTACC                GGATGCGGTGTGAAC  44 97
        nepI  432528 ..  432545 -  -2.7  -3.36823   CGTGGGAAAAGTTAA             TGTTGTC AGAT GAAAACA              ATAAACAACATATAC  47 164
        nlpA  431124 ..  431143 -  -2.8  -4.07687   ATTGGTGGTCCAAAA            GC-CAGCAT TTT AAGCTGTGC            AGAACCATTAAGTAG  58 192
HHJ42_RS02005 NONE
        yicI  423770 ..  423790 -  -6.8  -4.50841   ACAACAATACTAAAA            TCTGTCCG TAATC CGGACAGT            GATAAAACAAAGCAA  77 197
HHJ42_RS01995 NONE
HHJ42_RS01990 NONE
HHJ42_RS01985  421266 ..  421286 -  -3.3  -3.25823   TGTCTTTCATATTAA            GATCCCT CCAGTAT AAGGATC            ATTTGTTTCCCAGTG  46 24
HHJ42_RS01980 NONE
HHJ42_RS01975  419306 ..  419319 -  -3.1  -3.79764   ATGACAGAAAATGAA               TCAGGC TTT GCC-GA               TAGCGCCGCTCGCCT  53 12
HHJ42_RS01970  418341 ..  418356 - -11.8  -4.07568   CCTTGTTGCGTAAAA              GGCGGG TCAC CCCGCC               CTTCTGGCTTAGTAC  93 34
HHJ42_RS01965 NONE
HHJ42_RS01960  416687 ..  416716 -  -9.3  -4.47707   GTGCAGTAAAAATAA       GGACGCTAGCG GATATCAG CGCTAGCGTTC        CCCGTTATTAGCGCA  88 33
        gltS  411944 ..  411965 -   -13  -4.62471   TCGAATGCGTAAAAA           GCGGCGGT GAGAAG ACCGCCGC            TTCATCGGTTAACCG 100 34
        ligB  404141 ..  404151 -  -5.4  -3.19157   CACGAAGGTCACTAA                 GGTT CAA AACC                 TGTGATCTGCTGGGC  54 11
         rph  400452 ..  400469 - -11.3  -6.06529   TACAGACAAAAAAAA             GGCGACT CATC AGTCGCC              TTAAAAATCAGTTTG 100 33
        pyrE  399739 ..  399762 - -16.8  -2.77523   GTTGCAGTAATATGA          CGCCGGATGA CTTT TCATCCGGCG           AGTTTCGTTAAACGC 100 33
        radC  396508 ..  396521 -  -6.7   -4.2074   TCCCGAACAGACAAA               GATCC CGAA GGATC                GCGCATAGCGGGTTA  72 38
        rpmB NONE
        rpmG  395843 ..  395878 - -18.6  -2.90194   ATGGGGGCAAGCAGA    TAACAAAAAACCCCGC CGGG GCGAGGTTTTTTGTTA     CATCAAAGCGAGAAT 100 40
        mutM  394915 ..  394934 -  -7.2  -2.57132   TTCCTGCCGGAGAAT            GTCCATCAG GCG CTGATGG-C            GAAGTTAGCGTAGCG  57 77
        rfaQ  391718 ..  391731 -  -3.8  -3.48342   AAGCAACGATCATAA               CGAC GTACCT GTCG                TGGAGGAGGGAAGTA  52 6
HHJ42_RS01835 NONE
        rfaP  389807 ..  389820 -  -5.3  -3.60151   CTCCGGAAATTACAA               CGATT TTCG AATCG                TTCTTTCCCTGATTT  57 6
        waaO  388442 ..  388455 -  -2.3  -2.73468   CAATACCCTGAAGTA               TGTCG CGTA CGACC                AAAACTGTGACGTCG  40 339
        rfaY NONE
HHJ42_RS01810 NONE
HHJ42_RS01805 NONE
HHJ42_RS01800  383592 ..  383631 - -12.5  -2.80493   TCTTTAATAGATAAT  TTTGAAATAAAATCAGC TTCCTT GCTGATTTTATTTCACA   TATTCATTACTTATC  82 32
         kbl NONE
         tdh  378124 ..  378141 - -12.7  -4.18494   TATCCTCAGGCAAAA             GGGCTGG AATA CCAGCCC              TTGTTCGTGTTAATC 100 35
        waaH  376893 ..  376903 -  -2.4  -4.07246   CTAGCGCAAATTAAA                 GGCG CTA CGCG                 TAATGCGATGGTGCG  55 0
HHJ42_RS01750  372329 ..  372341 -  -5.5  -4.25283   AGGGCGGCAGCAAAA                TGGAG TGT CCCCA                GAAGCTTATATCAAT  67 99
        grxC NONE
        secB NONE
        gpsA  370419 ..  370448 -  -7.9  -3.78879   CACACGATAAGATAA       TGA-CCGACCCG TTCTGCG CGGGCCGGGTCA       TAGTGGTAACAAAGG  71 51
        cysE  369521 ..  369567 - -10.1  -3.22777   GTTGAGAGATTAAGA TGCGGTAG-GCCGGATAAGGCG TTCA CGCCGCATCCGGCACGATCACA GAATGTCAGATCCCA  74 31
HHJ42_RS01690  358178 ..  358196 - -10.4  -2.91264   CCTTTCACTGACAGA             GCTGATTT CCA AAATCAGC             TTAAAAAAAGCCTTT  72 60
HHJ42_RS01670  353143 ..  353158 -    -4  -3.41416   TTAAAACAATCAATA              GATCCA TATT TAGATC               TCCGGGAACGTGGAA  50 19
HHJ42_RS01665 NONE
HHJ42_RS01655  348741 ..  348758 - -12.7  -3.64755   ATATATCTTTAATAA             GCGTGGC AATT GCCACGC              TTAAACATTTTATTG  95 35
HHJ42_RS01645  345225 ..  345249 -  -8.7  -3.73647   CGTAGTCACTAATAA          TCCTGAGTTAT TAT ACAACTCAAGA          CTTTCCGTTCCAGGA  75 315
HHJ42_RS01635  340892 ..  340914 -  -5.5  -3.14463   AACCTGGCTGATCAA           GGCCCTCTC ACACG GAGAAGGGC           GTTTAACATAACCAC  54 81
        selA NONE
        selB  337552 ..  337578 -  -5.9  -5.07486   TATTTTTAATAAAAA         GCACGTTACAT TCATC AAATAACGTGC         CTTCTTAACATTAAT  80 87
        yiaY  336261 ..  336283 -  -7.6  -4.65838   GAGATAGTTGAAAAA           GCGGCTGACA ACT CGCCAGCCGT           TGTGGAAATGATGAT  82 40
HHJ42_RS01615  334809 ..  334827 - -13.2  -3.13475   CAAGGGTAGACGTAA             CTGGCGAA ATC TTCGCCAG             TCGGTGACAGCTTTA  91 71
        aldB  333022 ..  333035 -  -3.7  -3.60048   GCCTGGGGAAAAAAT               GCCGC CGAT GCGGT                GCATAACGCCGTGGT  53 217
        yiaJ NONE
HHJ42_RS01550  322253 ..  322265 -  -9.1  -3.54741   TACCAGCGCCTGAAA                GCACG CGG CGTGC                TGATGGTGCCGGGGC  73 338
HHJ42_RS01535  317776 ..  317805 - -15.1  -4.33274   CTGATACGAGCAAAA       GCCTTATCCGCCT GACA AGTCGGATAAGGC        TCGAGGAAATGCAAT 100 40
        xylA  310948 ..  310976 -  -9.6  -5.40072   CGTTCCTTAAAAAAA       TGCCCGG-TATCG CTAC CGATAACCGGGCC        AACGGACTGCACAGT 100 47
        xylB  309442 ..  309465 -  -8.8  -2.75039   TATAGATGTGAATTA          TCCCCCACCC GGTC AGGCAGGGGA           TAACGTTTACGCCAT  64 32
HHJ42_RS01500 NONE
HHJ42_RS01495  308444 ..  308469 - -10.5  -4.28548   AGTGAGTTAGTAAAA         GCCCGGTTA CATTGGAC TAACCGGGC          TTATGTGAATTATTC  85 35
HHJ42_RS01485 NONE
        glyQ NONE
        glyS  303848 ..  303865 - -12.7  -5.64274   TTAGCGATAAAAAAA             GCCTGCC AGAT GGCAGGC              TATTTAATAACGGCA 100 44
        hokA  303381 ..  303400 - -13.6  -4.20749   CAACACCGTAAGAAA            GGCGGGAA TAAT TTCCCGCC             GAAGACGCTTACTCT 100 34
HHJ42_RS01455  301266 ..  301284 -  -7.4  -3.72695   ACTGCGTGGAGTAAA             GCCCGA TAATCGC TCGGGC             TTTTACTCTTTATTG  68 35
        bisC NONE
HHJ42_RS01420  293711 ..  293730 - -12.2  -5.37345   TGCAACCATAAAAAA            GGGAGACT TCGA AGTCTCCC             TCATCGTATTTATTT 100 57
        lpfA  292870 ..  292900 - -12.7  -3.06737   CATGAACGTTGAACA       CAATTGGCGGAGA ATTCA TCTTCGCCAATTG       TGAAACTAACTATTA  83 38
        lpfB NONE
        lpfC NONE
HHJ42_RS01400 NONE
        lpfE  287910 ..  287925 -    -9  -5.00616   TGTTCTTGTAAAAAA              GAGGAG TAAT CTCCTC               TTTTTCTGCCAAAAG  93 52
        eptB  285911 ..  285921 -  -6.8  -3.13164   GCGCCAATCACCGAA                 TGCG GGG CGCA                 TCTTACTGCGCAGAT  59 101
HHJ42_RS01385  285803 ..  285821 - -14.6  -5.14477   TACAGATGCAAAAAA             GCCTGCTC GTT GAGCAGGC             TTTTCGAATTTGGTC 100 36
        dppA  283269 ..  283319 -  -6.8  -2.85337   ACAGGGAATGAAGTA TTGC-TGCCGGATGGCGCTGCAC GCAGAG GCACAGCGCCACCGGGTATGCAG ATTGTTGACAAAGAG  54 187
        dppB NONE
        dppC NONE
        dppD NONE
        dppF  279220 ..  279238 -  -9.5  -3.76402   AGTTGATTGAGTAAA             CCGGAGC GCATG GCCCCGG             TTTTGTGAGTTAACG  79 35
HHJ42_RS01345  277288 ..  277313 -   -14  -5.03201   AATAAGAACGAAAAA         GGCCGCAGAG TTTCAC CCCTGCGGCC          TGATCCGGACGCAAA 100 76
HHJ42_RS01325 NONE
        bcsQ  272383 ..  272401 - -10.2  -2.68784   GAATAAGATAACGGA             CCGGGTCC AGC GGACGCGG             ACGCGAGGCGTTGAT  70 241
        bcsB NONE
        bcsZ  266370 ..  266384 -  -2.8  -2.93723   CGGGCAGCAATCACA               TCCG GGTTATT CGGA               TCAATAAGTTCCAGC  42 180
        hmsP  260955 ..  260976 -  -4.4   -4.7657   CAAAAAGGTTAAAAA           GTTTGAGC TGGCTC GCACAAAC            CAGCACTTTTTAAAG  73 63
        dctA  259451 ..  259479 -   -14  -4.52669   AAGAAGTGAAATAAA        CCTGAACTCACC CAGGT GGTAAGTTCAGG        CACAGGGGTCAATTA 100 91
HHJ42_RS01285  257752 ..  257781 - -12.9  -3.14487   CAGCATATGCAAAAG       GCTGGATAGAGTG TTAC CCCCCTATCCAGC        TCATCCATAAATACC  91 73
        pdeH  255799 ..  255814 -  -5.4  -3.09004   CCAGGCGGAAAATGA              GGCAGCT TAT AGC-GCC              AGAACCGCCGTATTC  52 16
HHJ42_RS01270  253509 ..  253533 -  -8.5  -4.26019   TAATCAGAGTGAAAA          GCCTGATGCGC TAC GCTTATCAGGC          CAGAATTTCCATACA  80 167
HHJ42_RS01250  248648 ..  248691 - -11.2  -3.51329   TACGGCGAACCATAA TATTTTTACAGCCAGCCG CTAACTTC CTGCTGGCTGTAAAATTA TCCTCTTCAGGAGGA  85 32
         ccp  245161 ..  245186 - -14.1  -5.08601   TTATCGTAATAAAAA         TCGCCCAAACA CTCC TGTTCGGGCGA          TCAAATTAATTATTG 100 35
HHJ42_RS01235  243528 ..  243566 -  -7.5  -2.98947   TGCAATTAATAAGTA  GCCGAATACCC-ACCTGT TTTT AAAGGTTGGGCATTCGGT   TTTTACAACGTGATG  60 44
        gadX  242110 ..  242125 -  -3.2  -4.56597   TTCTGTGTGCAAAAA              CTGCCA TATT TGGTAG               GACCAAATTTTATCC  64 293
        gadW  240945 ..  240978 - -12.6  -2.92667   GTAACGTGTAAATGA     GAGTAAGGTTGAAC GTGAGG GTTCAGCCTTACTC      TTTCCTGCTAACCAT  82 343
HHJ42_RS01210  235842 ..  235853 -    -3  -3.88618   AAGATAATCACGAAA                TGAT AAAA ATCA                 ATTCCCTGTCAGAGA  55 421
        hdeA  233734 ..  233773 -  -5.8  -4.16301   GAGATTATATACAAA  CAGG-AGGAATAGCTGCTT TTA AAGAAGATATTCCGGCCTG  TTCAATATGCAAGGA  67 66
        hdeB  233324 ..  233354 - -14.8  -4.93595   ATAAAAATGCAAAAA       GGAGCAGCAAGATG GCT CAACTTGCTACTCC       TTTTTACTTGTACCT 100 43
HHJ42_RS01185  232616 ..  232640 - -14.4  -3.72743   GATCATTAAAACCAA          CAGGAGTACC GCACT GGTACTCCTG          CGAATAAATAACTAT 100 46
        chuA  224709 ..  224728 - -13.6  -4.03234   TTCCTTCCAGATAAA            TGCCCCGA AATA TCGGGGCA             GATGATTACCATTGA 100 31
        chuS  223619 ..  223642 -  -8.8  -4.34866   ATTGAACAATATAAA          GAGGCCCAGC AACA GCCAGACCTC           CCGTTAATTATACGT  84 40
HHJ42_RS01120  220279 ..  220305 - -13.8  -3.71649   GCGTTAAATGTTAAA         GGGCTAAGAGTA GTG TGCTCTTAGCCC         TTAGCTACGTTTCCG 100 44
        prlC NONE
        rsmJ  214966 ..  214991 - -20.5  -3.86346   TTATTCTTGCAGAAA         GCGGGGTAGCG TTAT CGCTACCCCGC          TTTACTTTTACACCG 100 33
        uspB  211952 ..  211973 - -11.5  -3.14218   TACGCACCAAAACGA           GCGGGTCAG TTTA CTGGCCCGC            TTTTTTTATGCGTCA  81 56
HHJ42_RS01075  208942 ..  208954 -  -9.1  -3.49668   AAAGGCTTCAGATAA                GGCGT TGG ACGCC                TTATCTGGTTTTATT  73 80
HHJ42_RS01065 NONE
        rbbA NONE
HHJ42_RS01055  201744 ..  201759 -  -3.9  -4.37092   ACGTGTGCTACAAAA              CGCGG TATTAC CCGCA               TTCCCCGTGCGCCGT  65 477
HHJ42_RS01010  193489 ..  193511 -  -7.6  -3.27923   CTGGAAGATCAGCAA           CGTAGCCGCG ATC CGCAGCTGCA           AGTGGTAACCAATAA  62 243
        tusA  191787 ..  191805 -   -11   -3.4252   TCGTAGGCATGATAA             GACGCGAC AGC GTCGCATC             AGGCATTGTGCACCG  81 184
HHJ42_RS00980  188196 ..  188216 -  -2.5  -3.65902   TCCACTTTACCGAAA            GATGGCC CGCAGAT GACCACC            GCCGAAAAGGTGCGG  49 106
        ftsY NONE
        ftsE NONE
        ftsX  183999 ..  184029 -  -6.2  -3.54089   CATAGAGATGAAATA      CCGGG-AAGAGAC AACGGG GTCTCTTTCCCTG       CTACGGAACCCATTG  60 67
        rpoH  182931 ..  182950 -  -7.8  -5.75538   CCCAAAAAACAAAAA            CCCCGGAC TCTC ATCCAGGG             TTCTCTGCTTAATAG 100 47
        livJ  181517 ..  181528 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG TTTA CGCC                 GCATCCGGCATGAAG  63 94
        livK  179464 ..  179484 - -10.4  -2.73159   GTAACCTTTCTAAAC            CCGCCCGT TTTTC ACGGACGG            TAGGATGATCACTTG  71 34
        livH NONE
        livM  177238 ..  177251 -  -3.1  -2.97503   TTAACAGATAATAAT               GGC-TG ACT CATGCC               TGCTCTCCTTTTGCT  44 19
        livG NONE
        livF  175732 ..  175747 -    -9  -3.53811   GTCACCTGTCTCAAA              GGAGTC TTTT GACTCC               TTATCAATCAACGTG  73 44
        ugpB  173958 ..  173975 -  -2.7  -2.67515   GGGATGATGACATTA             CAGTTAA TTCC TGAACTG              TGCCGGATGCGCTTC  40 103
        ugpA NONE
HHJ42_RS26100 NONE
        ugpE NONE
HHJ42_RS26090 NONE
HHJ42_RS26085 NONE
        ugpC NONE
        ugpQ  170417 ..  170439 -  -6.2  -3.08032   TTCCGTTGAAAACTA           TTGGGCCGTA AAG TTCGGACCAA           TCACGTCAATCGCAT  56 0
HHJ42_RS26075 NONE
HHJ42_RS26070 NONE
HHJ42_RS26065 NONE
HHJ42_RS26060 NONE
         ggt NONE
HHJ42_RS26055 NONE
HHJ42_RS26050 NONE
HHJ42_RS26045  165402 ..  165414 -  -7.7  -2.77895   GGGACTGGCAAGAAG                TACGC GCT GCGTA                ATGGTGAATATGTCG  60 28
        psiB  164937 ..  164950 -  -2.3  -3.59315   TCAATGATGTTGAAA               GGGAC ATTT ACCCC                AAAGAGGACAAAGGA  49 3
HHJ42_RS26035 NONE
HHJ42_RS26030 NONE
HHJ42_RS00850  163538 ..  163553 -  -3.2  -2.94099   CCTTGGGATGATAGA              GGGTGA AAAT TGACCC               CTCTGTTCAAAAAAA  44 67
        yhhW NONE
HHJ42_RS26020 NONE
HHJ42_RS26015 NONE
        gntR NONE
HHJ42_RS26010 NONE
HHJ42_RS26005 NONE
        gntK NONE
HHJ42_RS26000 NONE
HHJ42_RS25995 NONE
        gntU  159641 ..  159664 -   -14  -3.70947   GATAAGAGAAATGAA          TTACTGCGAG CAAG CTCGCAGTAA           TTTGTCGCAGTAATT 100 39
HHJ42_RS25985 NONE
        nikA NONE
HHJ42_RS00825 NONE
HHJ42_RS00820  156206 ..  156216 -  -5.4  -2.62667   GTAAGGTTCAAACAG                 GTGT TGC ACAC                 AACCAGACGCGGCAC  50 49
         asd  154309 ..  154320 -  -3.6  -2.96234   AATGAATAAAGATTA                CGCC AGTT GACG                 AAGCATCCGACGCAG  45 11
        glgB NONE
        glgX NONE
HHJ42_RS25950 NONE
        glgC NONE
HHJ42_RS25935 NONE
        glgA  146721 ..  146733 -  -6.9  -3.41581   GAATCGAGGAAGCAA                GCCGC CAG ACGGC                CCAGGCCACCGTTAC  59 423
HHJ42_RS00780  143415 ..  143462 - -11.6  -3.75665   TCATACTCTATTAAA TAATTTCAATCTCAGGTTACAA CTTT TTGTAACCTGAAATCGTATTTA TATTTACTCGTACAG  91 29
HHJ42_RS00770 NONE
HHJ42_RS00765 NONE
HHJ42_RS00760 NONE
HHJ42_RS00755 NONE
HHJ42_RS00750 NONE
HHJ42_RS00745 NONE
HHJ42_RS00740 NONE
HHJ42_RS00735  134463 ..  134475 -  -4.8  -3.16881   CACTTACGGCAGCAA                CAGC GAACT GCTG                CTCGGCAATGCCGGG  52 301
        glpE  132673 ..  132690 -  -6.3  -4.01888   AGGGGACAGTATAAA             GCGTTACG CGC CGTA-CGC             CACCTCTGCGGGAAA  68 11
        glpG NONE
HHJ42_RS00715  130956 ..  130968 -  -9.1  -2.65354   GCCAGGGTAAAGCCA                GCGTC AAT GACGC                GGATCGGCTACGCAA  62 83
        rtcB NONE
        rtcA  126583 ..  126601 -   -11  -2.55074   TCGAAGGCGAAGCGA             TGGCGCAA CAA CTGCGCCA             GCTTATTCAACTCAA  74 435
HHJ42_RS25800 NONE
        malP NONE
        malQ  119104 ..  119143 -  -9.3  -2.78018   ATTCGGCATTAATTA  GTAGGCCGGATAAGACGC GTCAA GCGTCGCATCCGGCAT-C  AACCGCACTCTACTT  66 35
        bioH  114895 ..  114906 -  -4.4  -3.86822   GAAGGGTTTCAGAAA                GGTA TACG TACC                 AACGCCCTAAATATT  60 356
        ompR NONE
        envZ  105441 ..  105472 -   -16  -3.02698   GTATCTTATAGAAAG      CAAAACGGGAGGCA CCTT CGCCTCCCGTTTTA       TTTACCCTTCTTTTG 100 27
HHJ42_RS25705 NONE
HHJ42_RS00615  101613 ..  101647 -  -7.9  -2.79023   CAAGTTCATTAATGA    GTA-TGTCCGGCAGAG AGGA CTCTGCCGGATTTTAC     GACTAATACACCTGA  60 50
HHJ42_RS25690   98521 ..   98540 -  -4.3  -3.54129   GATATGCCGCTGAAA            TTCACCC TCTCGT GGATGAA             AGGCGCGCAGACCAT  54 75
        nudE NONE
HHJ42_RS25685   96387 ..   96400 -  -9.5  -4.72272   TGTTCTGATTAAAAA               GGCGC TTCA GCGCC                TTTTTAAGTTTGCTG  91 56
HHJ42_RS25675 NONE
HHJ42_RS25660 NONE
        hofM NONE
        hofN NONE
HHJ42_RS25650 NONE
HHJ42_RS00570 NONE
HHJ42_RS25645 NONE
        hofP NONE
        hofQ NONE
HHJ42_RS25640 NONE
HHJ42_RS25635 NONE
        aroK NONE
        aroB   88320 ..   88338 -   -11  -3.15621   AACCTGAAGCTAATA             GACCGCTT GAT AAGCGGCC             TGACCTTTCTTGTTG  78 41
        damX   86938 ..   86965 -   -12  -3.05596   CAGCGCTTCAGGCAA        CGCCCGCAATGA TAAA CCATTGCGGGAG         ATAACCTTGATTACT  81 36
         dam NONE
HHJ42_RS25605 NONE
HHJ42_RS25600 NONE
         rpe NONE
HHJ42_RS25595 NONE
         gph NONE
        trpS   83556 ..   83569 -  -9.5  -5.67967   ATGAGGATAAAAAAA               CCGGG TTTC CCCGG                TTTTTGGCATTAATG 100 46
HHJ42_RS25580 NONE
HHJ42_RS25575 NONE
HHJ42_RS25570 NONE
HHJ42_RS00520   82532 ..   82542 -  -2.4  -3.61398   CCTTTCGTTTAATAA                 CTGG GTT CCTG                 TTCCCCACTGACTAC  49 8
HHJ42_RS00515   82095 ..   82112 -  -2.8  -3.90112   GTTCCTTGAATTAAA             TATTCA TTTTTT TGAATA              TTTAGGTTGTACGAC  54 59
HHJ42_RS25565 NONE
HHJ42_RS25560 NONE
HHJ42_RS00510 NONE
HHJ42_RS00505 NONE
HHJ42_RS25550 NONE
HHJ42_RS25545 NONE
HHJ42_RS00500 NONE
HHJ42_RS00495 NONE
HHJ42_RS25535 NONE
HHJ42_RS00490 NONE
HHJ42_RS25530 NONE
        pemI NONE
        pemK NONE
HHJ42_RS00485   76005 ..   76021 -  -3.7  -4.57073   CATTCTTTTCAAAAA              TATCGTT TAC AACGATT              AAATGCTGGCAATAC  66 24
HHJ42_RS25505 NONE
        merP   74053 ..   74070 -  -7.7  -3.28001   TACGCCGAAAGCGAA             TCGTCCG GTTG CGGACAA              ATTTAATCAAACTGA  65 17
        merC NONE
HHJ42_RS25490 NONE
        merD NONE
        merE   71198 ..   71212 -  -2.7  -4.40804   CACCAGGCTACAAAA               TGGCG CAGGT CGCCG               TTGACCATATTCTTG  62 58
HHJ42_RS25475   70200 ..   70219 -  -7.2  -3.36538   TATACAAATCAGCAA            TATACCCC TTAA GGAGTATA             TAAAGGTGAATTTGA  63 347
        ppiA   67986 ..   68007 - -17.3  -3.46602   GCCGGGAGAGCAGAA           GCGCGGGCA AGAT TGCCCGCGC            GAGAAATCATTACGG 100 35
HHJ42_RS00445 NONE
HHJ42_RS00440 NONE
        pabA   66558 ..   66570 -  -3.3  -4.06562   AATGGCAATCAGAAA                TCAGC GAT GCAGA                AAATTAGCCAGCAGT  58 13
   argD/dapC   65189 ..   65216 -  -9.8  -2.93853   ATACAGGCTAAACCA        TCGGATGAGGTG TTCA CGCCGCATCCGA         CATCTTTTGCCTGAT  70 61
HHJ42_RS25425 NONE
HHJ42_RS00415 NONE
HHJ42_RS25420   61279 ..   61296 -  -5.5  -2.62616   TGATCCGTGACACCA             GCGAGCG CGGG CACTCAC              GAGAAGCAGTGATGG  50 81
HHJ42_RS25415   60112 ..   60143 -    -8  -3.36823   CCTGTTAAAAGCCAA      TGCCGCGCGCAAGCT GGC AGCCTACCC-CGGCA      CACTGCCGATTAATC  65 236
HHJ42_RS25410   58106 ..   58119 -  -2.3   -2.8007   CGAACCGACTAACCA               CCTCG ATCT CGATG                CCGTTATCTGGCTGG  40 27
HHJ42_RS25405   57526 ..   57540 -  -5.8  -2.88999   CGCCCATACATTACA               TTATCA TAA TGATAA               GTTAACATAGTCTGA  51 38
        kefG NONE
HHJ42_RS25400 NONE
        kefB NONE
HHJ42_RS00380 NONE
HHJ42_RS25395 NONE
        slyD NONE
HHJ42_RS25390 NONE
HHJ42_RS25385 NONE
        fkpA NONE
HHJ42_RS25380 NONE
HHJ42_RS00360 NONE
HHJ42_RS25375 NONE
        tusD   51619 ..   51637 -  -3.8  -3.40403   TTCGTTTCATCAGAA             CTGTACCA CCC TGTCACAG             GTCAGCGAGGCTTCC  50 1
        tusC NONE
        tusB   50882 ..   50904 - -12.8   -4.7268   AAACACGTAATAAAA           CGTCCTCACA CAA TATGAGGACG           CCGAATTTTAGGGCG 100 81
        rpsL NONE
        rpsG   49843 ..   49868 - -11.2  -3.63895   TTTAAGTAGCCCAAA         GCGGGCTGCTT ACTGG AAGC-GCCCGC         CTGGTGACTAAAACT  87 50
        fusA   47631 ..   47656 - -15.5  -2.78935   ATATTCCTTACTATA         GTGCTCTCCCC TTCA GGAGAGAGCAC          GGGACTTTGGTATTA  95 51
HHJ42_RS25100 NONE
         tuf NONE
HHJ42_RS25095 NONE
HHJ42_RS25090 NONE
HHJ42_RS25085 NONE
HHJ42_RS25080 NONE
HHJ42_RS25075 NONE
HHJ42_RS25070 NONE
HHJ42_RS25065 NONE
        chiA NONE
         bfd NONE
HHJ42_RS25060 NONE
HHJ42_RS25055 NONE
         bfr NONE
HHJ42_RS25050   41614 ..   41634 -  -4.7  -4.56133   CTCGAAGAAGCAAAA            CGTGAGAAT TTG ACTATCACG            CTGGAAAACGGTCCG  70 298
HHJ42_RS25045 NONE
HHJ42_RS25040 NONE
HHJ42_RS25035 NONE
HHJ42_RS25030 NONE
HHJ42_RS25320 NONE
HHJ42_RS25025   39415 ..   39452 -  -4.1  -4.18019   ATAACGACAGACAAA   CCAC-GTTGCAGCAGTAC TGG GCACAACCGCAACAGTTG   CAGCTGGAAAATGGC  62 250
HHJ42_RS25020 NONE
HHJ42_RS25015 NONE
HHJ42_RS25010 NONE
HHJ42_RS25005   37531 ..   37549 -  -4.4  -3.41527   GAATCCTTAGTAGAA             GCGCCGAC ACT GCCACCGC             TGGCCGCAAACTATA  52 299
HHJ42_RS25000 NONE
HHJ42_RS24995 NONE
        ltrA NONE
HHJ42_RS25290 NONE
HHJ42_RS24990 NONE
        tnpB NONE
HHJ42_RS24985   33847 ..   33860 -  -4.5  -4.56153   TGATTATAAAAAGAA               TGGCG GGAT CACCA                GCGCGAATCCTGCCT  70 222
HHJ42_RS24980 NONE
HHJ42_RS25275 NONE
HHJ42_RS24975 NONE
HHJ42_RS25270   31721 ..   31745 -  -7.4   -2.5848   ATCATAAAAATAATG          TATGTATTTA TTAAT TAAATACATA          TTACTAATATAAATA  57 69
HHJ42_RS24965 NONE
        gspA NONE
        gspB NONE
        rpsJ NONE
HHJ42_RS24960 NONE
        rplC NONE
        rplD NONE
        rplW NONE
HHJ42_RS24955 NONE
HHJ42_RS24950 NONE
        rplB NONE
HHJ42_RS25245 NONE
        rpsS NONE
        rplV NONE
HHJ42_RS24945 NONE
HHJ42_RS24940 NONE
        rpsC NONE
HHJ42_RS24935 NONE
        rplP NONE
HHJ42_RS24930 NONE
        rpmC NONE
HHJ42_RS24925 NONE
        rpsQ NONE
HHJ42_RS25225 NONE
        rplN NONE
        rplX NONE
HHJ42_RS25220 NONE
HHJ42_RS24920 NONE
        rplE NONE
        rpsN NONE
HHJ42_RS24915 NONE
        rpsH NONE
HHJ42_RS24910 NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
HHJ42_RS24905 NONE
        secY NONE
        rpmJ NONE
        rpsM NONE
HHJ42_RS24900 NONE
        rpsK NONE
HHJ42_RS24895 NONE
        rpsD NONE
HHJ42_RS24890 NONE
HHJ42_RS24885 NONE
        rpoA NONE
        rplQ NONE
HHJ42_RS24880 NONE
HHJ42_RS00095 NONE
HHJ42_RS24875 NONE
        zntR NONE
        arfA NONE
HHJ42_RS24870 NONE
HHJ42_RS24865   11487 ..   11503 -  -5.1  -5.17353   ATACTTATGAAAAAA              CAACGTA ATT TACGTAG              CATGGCGGCCCAGGC  88 138
HHJ42_RS24855 NONE
HHJ42_RS25150 NONE
HHJ42_RS24850 NONE
        dprA NONE
HHJ42_RS25145 NONE
HHJ42_RS24845 NONE
HHJ42_RS00050 NONE
HHJ42_RS24840 NONE
HHJ42_RS00045 NONE
HHJ42_RS24835 NONE
HHJ42_RS25140 NONE
        tsaC NONE
HHJ42_RS24825 NONE
        aroE NONE
HHJ42_RS24820 NONE
HHJ42_RS00030 NONE
        ccdA    5903 ..    5916 -  -2.3  -4.77173   GTCCCACAAAATAAA               CGGCT GGAG AGCGG                ATATCTGTATCTCGG  68 18
        ccdB NONE
HHJ42_RS25120 NONE
HHJ42_RS00020 NONE
HHJ42_RS00015 NONE
        repE NONE
HHJ42_RS00010 NONE
HHJ42_RS26130 NONE
        sopA NONE
HHJ42_RS26115 NONE
HHJ42_RS25105 NONE
HHJ42_RS24780      67 ..      81 -  -2.7  -3.14211   ATTCTGTTTCATTAA               CCCGC TTGTC GCCGG               TTAATCTAATCTGTA   0 221
