locus-tag class description SG48_RS00005 PF08254 Threonine leader peptide SG48_RS00010 PF03447 Homoserine dehydrogenase, NAD binding domain SG48_RS00010 PF13840 ACT domain SG48_RS00010 PF01842 ACT domain SG48_RS00010 PF00696 Amino acid kinase family SG48_RS00010 PF00742 Homoserine dehydrogenase SG48_RS00015 PF08544 GHMP kinases C terminal SG48_RS00015 PF00288 GHMP kinases N terminal domain SG48_RS00020 PF14821 Threonine synthase N terminus SG48_RS00020 PF00291 Pyridoxal-phosphate dependent enzyme SG48_RS00030 PF10697 Protein of unknown function (DUF2502) SG48_RS00035 PF03883 Peroxide stress protein YaaA SG48_RS00040 PF01235 Sodium:alanine symporter family SG48_RS00045 PF00923 Transaldolase/Fructose-6-phosphate aldolase SG48_RS00050 PF00994 Probable molybdopterin binding domain SG48_RS00055 PF01184 GPR1/FUN34/yaaH family SG48_RS00060 PF03981 Ubiquinol-cytochrome C chaperone SG48_RS00060 PF13099 Domain of unknown function (DUF3944) SG48_RS00065 PF10807 Protein of unknown function (DUF2541) SG48_RS00070 PF00012 Hsp70 protein SG48_RS00075 PF00226 DnaJ domain SG48_RS00075 PF01556 DnaJ C terminal domain SG48_RS00075 PF00684 DnaJ central domain SG48_RS00080 PF01609 Transposase DDE domain SG48_RS00085 PF01848 Hok/gef family SG48_RS00090 PF06965 Na+/H+ antiporter 1 SG48_RS00095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS00095 PF03466 LysR substrate binding domain SG48_RS00100 PF03400 IS1 transposase SG48_RS00105 PF03811 InsA N-terminal domain SG48_RS00105 PF12759 InsA C-terminal domain SG48_RS00110 PF01649 Ribosomal protein S20 SG48_RS00115 PF10837 Protein of unknown function (DUF2575) SG48_RS00120 PF06574 FAD synthetase SG48_RS00120 PF01687 Riboflavin kinase SG48_RS00125 PF08264 Anticodon-binding domain of tRNA SG48_RS00125 PF00133 tRNA synthetases class I (I, L, M and V) SG48_RS00125 PF06827 Zinc finger found in FPG and IleRS SG48_RS00130 PF01252 Signal peptidase (SPase) II SG48_RS00135 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SG48_RS00140 PF02401 LytB protein SG48_RS00145 PF01156 Inosine-uridine preferring nucleoside hydrolase SG48_RS00150 PF05173 Dihydrodipicolinate reductase, C-terminus SG48_RS00150 PF01113 Dihydrodipicolinate reductase, N-terminus SG48_RS00165 PF00117 Glutamine amidotransferase class-I SG48_RS00165 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SG48_RS00170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SG48_RS00170 PF02142 MGS-like domain SG48_RS00170 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SG48_RS00180 PF07180 CaiF/GrlA transcriptional regulator SG48_RS00185 PF00132 Bacterial transferase hexapeptide (six repeats) SG48_RS00190 PF00378 Enoyl-CoA hydratase/isomerase SG48_RS00195 PF00501 AMP-binding enzyme SG48_RS00195 PF13193 AMP-binding enzyme C-terminal domain SG48_RS00200 PF02515 CoA-transferase family III SG48_RS00205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SG48_RS00205 PF02770 Acyl-CoA dehydrogenase, middle domain SG48_RS00205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SG48_RS00210 PF02028 BCCT, betaine/carnitine/choline family transporter SG48_RS00215 PF01012 Electron transfer flavoprotein domain SG48_RS00220 PF01012 Electron transfer flavoprotein domain SG48_RS00220 PF00766 Electron transfer flavoprotein FAD-binding domain SG48_RS00225 PF01494 FAD binding domain SG48_RS00235 PF00083 Sugar (and other) transporter SG48_RS00240 PF02525 Flavodoxin-like fold SG48_RS00245 PF00999 Sodium/hydrogen exchanger family SG48_RS00245 PF02254 TrkA-N domain SG48_RS00250 PF00186 Dihydrofolate reductase SG48_RS00255 PF00149 Calcineurin-like phosphoesterase SG48_RS00260 PF04379 ApaG domain SG48_RS00265 PF00398 Ribosomal RNA adenine dimethylase SG48_RS00270 PF04166 Pyridoxal phosphate biosynthetic protein PdxA SG48_RS00275 PF09312 SurA N-terminal domain SG48_RS00275 PF00639 PPIC-type PPIASE domain SG48_RS00280 PF04453 LPS transport system D SG48_RS00280 PF03968 OstA-like protein SG48_RS00285 PF00226 DnaJ domain SG48_RS00285 PF05099 Tellurite resistance protein TerB SG48_RS00295 PF00849 RNA pseudouridylate synthase SG48_RS00300 PF18337 RapA N-terminal Tudor like domain SG48_RS00300 PF18339 RapA N-terminal Tudor like domain 1 SG48_RS00300 PF00176 SNF2 family N-terminal domain SG48_RS00300 PF12137 RNA polymerase recycling family C-terminal SG48_RS00300 PF00271 Helicase conserved C-terminal domain SG48_RS00305 PF00136 DNA polymerase family B SG48_RS00305 PF03104 DNA polymerase family B, exonuclease domain SG48_RS00310 PF00596 Class II Aldolase and Adducin N-terminal domain SG48_RS00315 PF02610 L-arabinose isomerase SG48_RS00315 PF11762 L-arabinose isomerase C-terminal domain SG48_RS00320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SG48_RS00325 PF02311 AraC-like ligand binding domain SG48_RS00325 PF12833 Helix-turn-helix domain SG48_RS00330 PF09335 SNARE associated Golgi protein SG48_RS00335 PF00005 ABC transporter SG48_RS00340 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS00350 PF12793 Sugar transport-related sRNA regulator N-term SG48_RS00350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SG48_RS00360 PF07690 Major Facilitator Superfamily SG48_RS00365 PF00694 Aconitase C-terminal domain SG48_RS00370 PF00330 Aconitase family (aconitate hydratase) SG48_RS00375 PF00180 Isocitrate/isopropylmalate dehydrogenase SG48_RS00380 PF00682 HMGL-like SG48_RS00380 PF08502 LeuA allosteric (dimerisation) domain SG48_RS00385 PF08054 Leucine operon leader peptide SG48_RS00390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS00390 PF03466 LysR substrate binding domain SG48_RS00395 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SG48_RS00395 PF00205 Thiamine pyrophosphate enzyme, central domain SG48_RS00395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SG48_RS00400 PF10369 Small subunit of acetolactate synthase SG48_RS00410 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SG48_RS00410 PF00356 Bacterial regulatory proteins, lacI family SG48_RS00415 PF02381 MraZ protein, putative antitoxin-like SG48_RS00420 PF01795 MraW methylase family SG48_RS00425 PF04999 Cell division protein FtsL SG48_RS00430 PF00905 Penicillin binding protein transpeptidase domain SG48_RS00430 PF03717 Penicillin-binding Protein dimerisation domain SG48_RS00435 PF01225 Mur ligase family, catalytic domain SG48_RS00435 PF02875 Mur ligase family, glutamate ligase domain SG48_RS00435 PF08245 Mur ligase middle domain SG48_RS00440 PF01225 Mur ligase family, catalytic domain SG48_RS00440 PF02875 Mur ligase family, glutamate ligase domain SG48_RS00440 PF08245 Mur ligase middle domain SG48_RS00445 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SG48_RS00445 PF00953 Glycosyl transferase family 4 SG48_RS00450 PF02875 Mur ligase family, glutamate ligase domain SG48_RS00450 PF08245 Mur ligase middle domain SG48_RS00455 PF01098 Cell cycle protein SG48_RS00460 PF04101 Glycosyltransferase family 28 C-terminal domain SG48_RS00460 PF03033 Glycosyltransferase family 28 N-terminal domain SG48_RS00465 PF08245 Mur ligase middle domain SG48_RS00465 PF01225 Mur ligase family, catalytic domain SG48_RS00465 PF02875 Mur ligase family, glutamate ligase domain SG48_RS00470 PF07478 D-ala D-ala ligase C-terminus SG48_RS00470 PF01820 D-ala D-ala ligase N-terminus SG48_RS00475 PF03799 Cell division protein FtsQ SG48_RS00475 PF08478 POTRA domain, FtsQ-type SG48_RS00480 PF02491 SHS2 domain inserted in FTSA SG48_RS00485 PF12327 FtsZ family, C-terminal domain SG48_RS00485 PF00091 Tubulin/FtsZ family, GTPase domain SG48_RS00490 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase SG48_RS00495 PF06558 Secretion monitor precursor protein (SecM) SG48_RS00500 PF07517 SecA DEAD-like domain SG48_RS00500 PF02810 SEC-C motif SG48_RS00500 PF01043 SecA preprotein cross-linking domain SG48_RS00500 PF07516 SecA Wing and Scaffold domain SG48_RS00505 PF00293 NUDIX domain SG48_RS00515 PF03884 DNA gyrase inhibitor YacG SG48_RS00520 PF07072 Cell division protein SG48_RS00525 PF01121 Dephospho-CoA kinase SG48_RS00530 PF00478 IMP dehydrogenase / GMP reductase domain SG48_RS00535 PF00482 Type II secretion system (T2SS), protein F SG48_RS00540 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SG48_RS00540 PF00437 Type II/IV secretion system protein SG48_RS00545 PF07963 Prokaryotic N-terminal methylation motif SG48_RS00555 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SG48_RS00555 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SG48_RS00560 PF01510 N-acetylmuramoyl-L-alanine amidase SG48_RS00565 PF17113 Regulatory signalling modulator protein AmpE SG48_RS00570 PF00324 Amino acid permease SG48_RS00575 PF07729 FCD domain SG48_RS00575 PF00392 Bacterial regulatory proteins, gntR family SG48_RS00580 PF00456 Transketolase, thiamine diphosphate binding domain SG48_RS00580 PF17831 Pyruvate dehydrogenase E1 component middle domain SG48_RS00585 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SG48_RS00585 PF02817 e3 binding domain SG48_RS00585 PF00364 Biotin-requiring enzyme SG48_RS00590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SG48_RS00590 PF07992 Pyridine nucleotide-disulphide oxidoreductase SG48_RS00595 PF11737 Protein of unknown function (DUF3300) SG48_RS00600 PF11791 Aconitate B N-terminal domain SG48_RS00600 PF06434 Aconitate hydratase 2 N-terminus SG48_RS00600 PF00330 Aconitase family (aconitate hydratase) SG48_RS00605 PF06062 Uncharacterised protein family (UPF0231) SG48_RS00610 PF02675 S-adenosylmethionine decarboxylase SG48_RS00615 PF17284 Spermidine synthase tetramerisation domain SG48_RS00620 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) SG48_RS00625 PF00394 Multicopper oxidase SG48_RS00625 PF07731 Multicopper oxidase SG48_RS00625 PF07732 Multicopper oxidase SG48_RS00630 PF01011 PQQ enzyme repeat SG48_RS00635 PF00156 Phosphoribosyl transferase domain SG48_RS00640 PF00484 Carbonic anhydrase SG48_RS00645 PF00005 ABC transporter SG48_RS00650 PF01061 ABC-2 type transporter SG48_RS00655 PF03610 PTS system fructose IIA component SG48_RS00660 PF01522 Polysaccharide deacetylase SG48_RS00665 PF02261 Aspartate decarboxylase SG48_RS00670 PF04754 Putative transposase, YhgA-like SG48_RS00675 PF02569 Pantoate-beta-alanine ligase SG48_RS00680 PF02548 Ketopantoate hydroxymethyltransferase SG48_RS00685 PF00419 Fimbrial protein SG48_RS00690 PF00419 Fimbrial protein SG48_RS00695 PF00419 Fimbrial protein SG48_RS00700 PF00419 Fimbrial protein SG48_RS00705 PF00577 Outer membrane usher protein SG48_RS00705 PF13953 PapC C-terminal domain SG48_RS00705 PF13954 PapC N-terminal domain SG48_RS00710 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SG48_RS00710 PF02753 Pili assembly chaperone PapD, C-terminal domain SG48_RS00715 PF00419 Fimbrial protein SG48_RS00720 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SG48_RS00725 PF12626 Polymerase A arginine-rich C-terminus SG48_RS00725 PF12627 Probable RNA and SrmB- binding site of polymerase A SG48_RS00725 PF01743 Poly A polymerase head domain SG48_RS00730 PF00749 tRNA synthetases class I (E and Q), catalytic domain SG48_RS00735 PF01258 Prokaryotic dksA/traR C4-type zinc finger SG48_RS00740 PF03749 Sugar fermentation stimulation protein RE domain SG48_RS00740 PF17746 SfsA N-terminal OB domain SG48_RS00745 PF02834 LigT like Phosphoesterase SG48_RS00750 PF00270 DEAD/DEAH box helicase SG48_RS00750 PF04408 Helicase associated domain (HA2) SG48_RS00750 PF08482 ATP-dependent helicase C-terminal SG48_RS00750 PF00271 Helicase conserved C-terminal domain SG48_RS00760 PF14814 Bifunctional transglycosylase second domain SG48_RS00760 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal SG48_RS00760 PF00912 Transglycosylase SG48_RS00760 PF00905 Penicillin binding protein transpeptidase domain SG48_RS00765 PF07715 TonB-dependent Receptor Plug Domain SG48_RS00765 PF00593 TonB dependent receptor SG48_RS00770 PF00005 ABC transporter SG48_RS00775 PF01497 Periplasmic binding protein SG48_RS00780 PF01032 FecCD transport family SG48_RS00785 PF00202 Aminotransferase class-III SG48_RS00790 PF00654 Voltage gated chloride channel SG48_RS00795 PF01521 Iron-sulphur cluster biosynthesis SG48_RS00800 PF03458 UPF0126 domain SG48_RS00805 PF01497 Periplasmic binding protein SG48_RS00810 PF01048 Phosphorylase superfamily SG48_RS00815 PF13286 Phosphohydrolase-associated domain SG48_RS00815 PF01966 HD domain SG48_RS00820 PF00595 PDZ domain SG48_RS00825 PF17853 GGDEF-like domain SG48_RS00825 PF13556 PucR C-terminal helix-turn-helix domain SG48_RS00825 PF05651 Putative sugar diacid recognition SG48_RS00830 PF11944 Protein of unknown function (DUF3461) SG48_RS00835 PF00149 Calcineurin-like phosphoesterase SG48_RS00840 PF00132 Bacterial transferase hexapeptide (six repeats) SG48_RS00840 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal SG48_RS00840 PF14602 Hexapeptide repeat of succinyl-transferase SG48_RS00845 PF01909 Nucleotidyltransferase domain SG48_RS00845 PF08335 GlnD PII-uridylyltransferase SG48_RS00845 PF01842 ACT domain SG48_RS00845 PF01966 HD domain SG48_RS00850 PF00557 Metallopeptidase family M24 SG48_RS00855 PF00318 Ribosomal protein S2 SG48_RS00860 PF00889 Elongation factor TS SG48_RS00865 PF00696 Amino acid kinase family SG48_RS00870 PF01765 Ribosome recycling factor SG48_RS00875 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain SG48_RS00875 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SG48_RS00875 PF13288 DXP reductoisomerase C-terminal domain SG48_RS00880 PF01255 Putative undecaprenyl diphosphate synthase SG48_RS00890 PF17820 PDZ domain SG48_RS00890 PF02163 Peptidase family M50 SG48_RS00895 PF07244 Surface antigen variable number repeat SG48_RS00895 PF01103 Surface antigen SG48_RS00900 PF03938 Outer membrane protein (OmpH-like) SG48_RS00905 PF00132 Bacterial transferase hexapeptide (six repeats) SG48_RS00905 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD SG48_RS00910 PF07977 FabA-like domain SG48_RS00915 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 SG48_RS00915 PF00132 Bacterial transferase hexapeptide (six repeats) SG48_RS00920 PF02684 Lipid-A-disaccharide synthetase SG48_RS00925 PF01351 Ribonuclease HII SG48_RS00930 PF14579 Helix-hairpin-helix motif SG48_RS00930 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SG48_RS00930 PF01336 OB-fold nucleic acid binding domain SG48_RS00930 PF02811 PHP domain SG48_RS00930 PF07733 Bacterial DNA polymerase III alpha NTPase domain SG48_RS00935 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SG48_RS00940 PF01276 Orn/Lys/Arg decarboxylase, major domain SG48_RS00940 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SG48_RS00940 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain SG48_RS00945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SG48_RS00950 PF01171 PP-loop family SG48_RS00950 PF09179 TilS substrate binding domain SG48_RS00950 PF11734 TilS substrate C-terminal domain SG48_RS00955 PF07073 Modulator of Rho-dependent transcription termination (ROF) SG48_RS00960 PF06786 Uncharacterised protein family (UPF0253) SG48_RS00965 PF07152 YaeQ protein SG48_RS00970 PF00472 RF-1 domain SG48_RS00975 PF17185 NlpE C-terminal OB domain SG48_RS00975 PF04170 NlpE N-terminal domain SG48_RS00980 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family SG48_RS00985 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SG48_RS00985 PF03129 Anticodon binding domain SG48_RS00985 PF04073 Aminoacyl-tRNA editing domain SG48_RS00990 PF18389 TrmO C-terminal domain SG48_RS00990 PF01980 tRNA-methyltransferase O SG48_RS00995 PF16358 RcsF lipoprotein SG48_RS01000 PF03180 NLPA lipoprotein SG48_RS01005 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS01010 PF09383 NIL domain SG48_RS01010 PF00005 ABC transporter SG48_RS01050 PF00248 Aldo/keto reductase family SG48_RS01055 PF03466 LysR substrate binding domain SG48_RS01055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS01060 PF03372 Endonuclease/Exonuclease/phosphatase family SG48_RS01065 PF08241 Methyltransferase domain SG48_RS01070 PF01464 Transglycosylase SLT domain SG48_RS01070 PF01476 LysM domain SG48_RS01075 PF16123 Hydroxyacylglutathione hydrolase C-terminus SG48_RS01075 PF00753 Metallo-beta-lactamase superfamily SG48_RS01080 PF08241 Methyltransferase domain SG48_RS01085 PF00075 RNase H SG48_RS01090 PF00929 Exonuclease SG48_RS01115 PF01609 Transposase DDE domain SG48_RS01115 PF13808 DDE_Tnp_1-associated SG48_RS01120 PF00795 Carbon-nitrogen hydrolase SG48_RS01130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SG48_RS01130 PF09317 Domain of unknown function (DUF1974) SG48_RS01130 PF02770 Acyl-CoA dehydrogenase, middle domain SG48_RS01130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SG48_RS01135 PF13580 SIS domain SG48_RS01140 PF13230 Glutamine amidotransferases class-II SG48_RS01145 PF03734 L,D-transpeptidase catalytic domain SG48_RS01150 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ SG48_RS01155 PF04221 RelB antitoxin SG48_RS01160 PF00877 NlpC/P60 family SG48_RS01170 PF00771 FHIPEP family SG48_RS01175 PF13677 Membrane MotB of proton-channel complex MotA/MotB SG48_RS01175 PF00691 OmpA family SG48_RS01180 PF11798 IMS family HHH motif SG48_RS01180 PF00817 impB/mucB/samB family SG48_RS01180 PF11799 impB/mucB/samB family C-terminal domain SG48_RS01190 PF13957 Toxin YafO, type II toxin-antitoxin system SG48_RS01195 PF13673 Acetyltransferase (GNAT) domain SG48_RS01205 PF00472 RF-1 domain SG48_RS01210 PF07687 Peptidase dimerisation domain SG48_RS01210 PF01546 Peptidase family M20/M25/M40 SG48_RS01215 PF00156 Phosphoribosyl transferase domain SG48_RS01220 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) SG48_RS01225 PF07417 Sigma factor-binding transcriptional regulator Crl SG48_RS01230 PF00267 Gram-negative porin SG48_RS01235 PF01472 PUA domain SG48_RS01235 PF00696 Amino acid kinase family SG48_RS01240 PF00171 Aldehyde dehydrogenase family SG48_RS01250 PF06755 CbtA_toxin of type IV toxin-antitoxin system SG48_RS01255 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A SG48_RS01260 PF04002 RadC-like JAB domain SG48_RS01265 PF03230 Antirestriction protein SG48_RS01270 PF06006 Bacterial protein of unknown function (DUF905) SG48_RS01290 PF06067 Domain of unknown function (DUF932) SG48_RS01295 PF01926 50S ribosome-binding GTPase SG48_RS01300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS01300 PF03466 LysR substrate binding domain SG48_RS01305 PF01527 Transposase SG48_RS01310 PF13936 Helix-turn-helix domain SG48_RS01310 PF00665 Integrase core domain SG48_RS01330 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SG48_RS01335 PF01609 Transposase DDE domain SG48_RS01335 PF05598 Transposase domain (DUF772) SG48_RS01340 PF00324 Amino acid permease SG48_RS01345 PF02574 Homocysteine S-methyltransferase SG48_RS01350 PF08402 TOBE domain SG48_RS01350 PF00005 ABC transporter SG48_RS01355 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS01360 PF03400 IS1 transposase SG48_RS01365 PF03811 InsA N-terminal domain SG48_RS01365 PF12759 InsA C-terminal domain SG48_RS01370 PF01527 Transposase SG48_RS01375 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A SG48_RS01380 PF00665 Integrase core domain SG48_RS01385 PF00701 Dihydrodipicolinate synthetase family SG48_RS01390 PF00920 Dehydratase family SG48_RS01400 PF04616 Glycosyl hydrolases family 43 SG48_RS01400 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain SG48_RS01405 PF09339 IclR helix-turn-helix domain SG48_RS01405 PF01614 Bacterial transcriptional regulator SG48_RS01410 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SG48_RS01410 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SG48_RS01415 PF03400 IS1 transposase SG48_RS01430 PF07638 ECF sigma factor SG48_RS01450 PF00589 Phage integrase family SG48_RS01450 PF13356 Arm DNA-binding domain SG48_RS01460 PF03466 LysR substrate binding domain SG48_RS01465 PF02625 XdhC and CoxI family SG48_RS01465 PF13478 XdhC Rossmann domain SG48_RS01470 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase SG48_RS01470 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain SG48_RS01475 PF00941 FAD binding domain in molybdopterin dehydrogenase SG48_RS01475 PF03450 CO dehydrogenase flavoprotein C-terminal domain SG48_RS01480 PF01799 [2Fe-2S] binding domain SG48_RS01480 PF00111 2Fe-2S iron-sulfur cluster binding domain SG48_RS01485 PF07274 Protein of unknown function (DUF1440) SG48_RS01490 PF03692 Putative zinc- or iron-chelating domain SG48_RS01505 PF15976 CS1-pili formation C-terminal SG48_RS01505 PF16967 E-set like domain SG48_RS01510 PF18649 EcpB C-terminal domain SG48_RS01515 PF16449 Fimbrillin MatB SG48_RS01520 PF00196 Bacterial regulatory proteins, luxR family SG48_RS01530 PF00444 Ribosomal protein L36 SG48_RS01535 PF01197 Ribosomal protein L31 SG48_RS01545 PF11924 Inverse autotransporter, beta-domain SG48_RS01550 PF01527 Transposase SG48_RS01555 PF00665 Integrase core domain SG48_RS01555 PF13333 Integrase core domain SG48_RS01555 PF13276 HTH-like domain SG48_RS01560 PF12833 Helix-turn-helix domain SG48_RS01565 PF04224 Protein of unknown function, DUF417 SG48_RS01570 PF07338 Protein of unknown function (DUF1471) SG48_RS01575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SG48_RS01575 PF07992 Pyridine nucleotide-disulphide oxidoreductase SG48_RS01580 PF12833 Helix-turn-helix domain SG48_RS01580 PF12852 Cupin SG48_RS01585 PF02754 Cysteine-rich domain SG48_RS01590 PF13183 4Fe-4S dicluster domain SG48_RS01590 PF11870 Domain of unknown function (DUF3390) SG48_RS01590 PF02589 LUD domain SG48_RS01595 PF02589 LUD domain SG48_RS01610 PF05199 GMC oxidoreductase SG48_RS01610 PF00732 GMC oxidoreductase SG48_RS01615 PF00171 Aldehyde dehydrogenase family SG48_RS01620 PF00440 Bacterial regulatory proteins, tetR family SG48_RS01620 PF13977 BetI-type transcriptional repressor, C-terminal SG48_RS01625 PF02028 BCCT, betaine/carnitine/choline family transporter SG48_RS01635 PF00196 Bacterial regulatory proteins, luxR family SG48_RS01635 PF00563 EAL domain SG48_RS01640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS01640 PF03466 LysR substrate binding domain SG48_RS01645 PF06496 Protein of unknown function (DUF1097) SG48_RS01650 PF12796 Ankyrin repeats (3 copies) SG48_RS01655 PF11392 Protein of unknown function (DUF2877) SG48_RS01660 PF02629 CoA binding domain SG48_RS01660 PF00549 CoA-ligase SG48_RS01665 PF06545 Protein of unknown function (DUF1116) SG48_RS01675 PF00696 Amino acid kinase family SG48_RS01680 PF07969 Amidohydrolase family SG48_RS01685 PF00107 Zinc-binding dehydrogenase SG48_RS01685 PF08240 Alcohol dehydrogenase GroES-like domain SG48_RS01700 PF01810 LysE type translocator SG48_RS01705 PF07338 Protein of unknown function (DUF1471) SG48_RS01710 PF06506 Propionate catabolism activator SG48_RS01710 PF02954 Bacterial regulatory protein, Fis family SG48_RS01710 PF00158 Sigma-54 interaction domain SG48_RS01720 PF00285 Citrate synthase, C-terminal domain SG48_RS01725 PF03972 MmgE/PrpD family SG48_RS01730 PF13193 AMP-binding enzyme C-terminal domain SG48_RS01730 PF00501 AMP-binding enzyme SG48_RS01730 PF16177 Acetyl-coenzyme A synthetase N-terminus SG48_RS01735 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin SG48_RS01740 PF07969 Amidohydrolase family SG48_RS01745 PF03466 LysR substrate binding domain SG48_RS01745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS01750 PF00484 Carbonic anhydrase SG48_RS01755 PF02560 Cyanate lyase C-terminal domain SG48_RS01760 PF07690 Major Facilitator Superfamily SG48_RS01765 PF00132 Bacterial transferase hexapeptide (six repeats) SG48_RS01765 PF12464 Maltose acetyltransferase SG48_RS01770 PF01306 LacY proton/sugar symporter SG48_RS01775 PF00703 Glycosyl hydrolases family 2 SG48_RS01775 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SG48_RS01775 PF02837 Glycosyl hydrolases family 2, sugar binding domain SG48_RS01775 PF02929 Beta galactosidase small chain SG48_RS01775 PF16353 Domain of unknown function(DUF4981) SG48_RS01780 PF00356 Bacterial regulatory proteins, lacI family SG48_RS01785 PF09339 IclR helix-turn-helix domain SG48_RS01785 PF01614 Bacterial transcriptional regulator SG48_RS01790 PF01494 FAD binding domain SG48_RS01795 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase SG48_RS01800 PF12697 Alpha/beta hydrolase family SG48_RS01805 PF01557 Fumarylacetoacetate (FAA) hydrolase family SG48_RS01810 PF01118 Semialdehyde dehydrogenase, NAD binding domain SG48_RS01810 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation SG48_RS01815 PF00682 HMGL-like SG48_RS01815 PF07836 DmpG-like communication domain SG48_RS01820 PF07690 Major Facilitator Superfamily SG48_RS01825 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) SG48_RS01830 PF00756 Putative esterase SG48_RS01835 PF00107 Zinc-binding dehydrogenase SG48_RS01835 PF08240 Alcohol dehydrogenase GroES-like domain SG48_RS01840 PF02583 Metal-sensitive transcriptional repressor SG48_RS01850 PF00132 Bacterial transferase hexapeptide (six repeats) SG48_RS01860 PF01527 Transposase SG48_RS01865 PF13276 HTH-like domain SG48_RS01865 PF00665 Integrase core domain SG48_RS01870 PF00535 Glycosyl transferase family 2 SG48_RS01875 PF02585 GlcNAc-PI de-N-acetylase SG48_RS01880 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SG48_RS01885 PF00005 ABC transporter SG48_RS01890 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS01895 PF02668 Taurine catabolism dioxygenase TauD, TfdA family SG48_RS01900 PF00490 Delta-aminolevulinic acid dehydratase SG48_RS01915 PF13333 Integrase core domain SG48_RS01915 PF00665 Integrase core domain SG48_RS01915 PF13276 HTH-like domain SG48_RS01920 PF01527 Transposase SG48_RS01925 PF03797 Autotransporter beta-domain SG48_RS01925 PF03212 Pertactin SG48_RS01930 PF15977 Winged helix-turn-helix DNA binding SG48_RS01935 PF00144 Beta-lactamase SG48_RS01945 PF05992 SbmA/BacA-like family SG48_RS01950 PF07759 Protein of unknown function (DUF1615) SG48_RS01955 PF10954 Protein of unknown function (DUF2755) SG48_RS01960 PF10953 Protein of unknown function (DUF2754) SG48_RS01965 PF07478 D-ala D-ala ligase C-terminus SG48_RS01965 PF01820 D-ala D-ala ligase N-terminus SG48_RS01975 PF10796 Sigma-S stabilisation anti-adaptor protein SG48_RS01980 PF00245 Alkaline phosphatase SG48_RS01985 PF07769 psiF repeat SG48_RS01990 PF00990 Diguanylate cyclase, GGDEF domain SG48_RS01990 PF05230 MASE2 domain SG48_RS01995 PF14748 Pyrroline-5-carboxylate reductase dimerisation SG48_RS01995 PF03807 NADP oxidoreductase coenzyme F420-dependent SG48_RS02000 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 SG48_RS02005 PF01202 Shikimate kinase SG48_RS02010 PF16362 YaiA protein SG48_RS02020 PF07302 AroM protein SG48_RS02025 PF06865 Pyrimidine/purine nucleoside phosphorylase SG48_RS02030 PF10971 Protein of unknown function (DUF2773) SG48_RS02035 PF04381 Putative exonuclease, RdgC SG48_RS02040 PF00480 ROK family SG48_RS02045 PF07690 Major Facilitator Superfamily SG48_RS02050 PF13476 AAA domain SG48_RS02055 PF00149 Calcineurin-like phosphoesterase SG48_RS02055 PF12320 Type 5 capsule protein repressor C-terminal domain SG48_RS02060 PF00486 Transcriptional regulatory protein, C terminal SG48_RS02060 PF00072 Response regulator receiver domain SG48_RS02065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS02065 PF00989 PAS fold SG48_RS02065 PF00512 His Kinase A (phospho-acceptor) domain SG48_RS02065 PF11808 Phosphate regulon sensor protein PhoR SG48_RS02070 PF05525 Branched-chain amino acid transport protein SG48_RS02075 PF00324 Amino acid permease SG48_RS02080 PF02903 Alpha amylase, N-terminal ig-like domain SG48_RS02080 PF00128 Alpha amylase, catalytic domain SG48_RS02085 PF04336 Acyl carrier protein phosphodiesterase SG48_RS02090 PF02547 Queuosine biosynthesis protein SG48_RS02095 PF01702 Queuine tRNA-ribosyltransferase SG48_RS02100 PF02699 Preprotein translocase subunit SG48_RS02105 PF02355 Protein export membrane protein SG48_RS02105 PF07549 SecD/SecF GG Motif SG48_RS02105 PF13721 SecD export protein N-terminal TM region SG48_RS02110 PF02355 Protein export membrane protein SG48_RS02110 PF07549 SecD/SecF GG Motif SG48_RS02115 PF01844 HNH endonuclease SG48_RS02125 PF03502 Nucleoside-specific channel-forming protein, Tsx SG48_RS02130 PF11622 Protein of unknown function (DUF3251) SG48_RS02135 PF03477 ATP cone domain SG48_RS02140 PF01872 RibD C-terminal domain SG48_RS02140 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SG48_RS02145 PF00885 6,7-dimethyl-8-ribityllumazine synthase SG48_RS02150 PF01029 NusB family SG48_RS02155 PF02769 AIR synthase related protein, C-terminal domain SG48_RS02155 PF00586 AIR synthase related protein, N-terminal domain SG48_RS02160 PF04608 Phosphatidylglycerophosphatase A SG48_RS02165 PF00248 Aldo/keto reductase family SG48_RS02170 PF02780 Transketolase, C-terminal domain SG48_RS02170 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SG48_RS02170 PF02779 Transketolase, pyrimidine binding domain SG48_RS02175 PF00348 Polyprenyl synthetase SG48_RS02180 PF02609 Exonuclease VII small subunit SG48_RS02185 PF02568 Thiamine biosynthesis protein (ThiI) SG48_RS02185 PF02926 THUMP domain SG48_RS02190 PF01965 DJ-1/PfpI family SG48_RS02195 PF08546 Ketopantoate reductase PanE/ApbA C terminal SG48_RS02195 PF02558 Ketopantoate reductase PanE/ApbA SG48_RS02200 PF04461 Protein of unknown function (DUF520) SG48_RS02205 PF07690 Major Facilitator Superfamily SG48_RS02210 PF01040 UbiA prenyltransferase family SG48_RS02215 PF03626 Prokaryotic Cytochrome C oxidase subunit IV SG48_RS02220 PF00510 Cytochrome c oxidase subunit III SG48_RS02225 PF00115 Cytochrome C and Quinol oxidase polypeptide I SG48_RS02230 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SG48_RS02230 PF06481 COX Aromatic Rich Motif SG48_RS02235 PF07690 Major Facilitator Superfamily SG48_RS02240 PF08139 Prokaryotic membrane lipoprotein lipid attachment site SG48_RS02240 PF03923 Uncharacterized lipoprotein SG48_RS02245 PF01722 BolA-like protein SG48_RS02255 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SG48_RS02255 PF05698 Bacterial trigger factor protein (TF) C-terminus SG48_RS02255 PF05697 Bacterial trigger factor protein (TF) SG48_RS02260 PF00574 Clp protease SG48_RS02265 PF06689 ClpX C4-type zinc finger SG48_RS02265 PF10431 C-terminal, D2-small domain, of ClpB protein SG48_RS02265 PF07724 AAA domain (Cdc48 subfamily) SG48_RS02270 PF05362 Lon protease (S16) C-terminal proteolytic domain SG48_RS02270 PF00004 ATPase family associated with various cellular activities (AAA) SG48_RS02270 PF02190 ATP-dependent protease La (LON) substrate-binding domain SG48_RS02275 PF00216 Bacterial DNA-binding protein SG48_RS02280 PF13145 PPIC-type PPIASE domain SG48_RS02295 PF06508 Queuosine biosynthesis protein QueC SG48_RS02300 PF12793 Sugar transport-related sRNA regulator N-term SG48_RS02300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SG48_RS02310 PF13404 AsnC-type helix-turn-helix domain SG48_RS02310 PF01037 Lrp/AsnC ligand binding domain SG48_RS02315 PF00005 ABC transporter SG48_RS02315 PF00664 ABC transporter transmembrane region SG48_RS02320 PF00664 ABC transporter transmembrane region SG48_RS02320 PF00005 ABC transporter SG48_RS02325 PF00543 Nitrogen regulatory protein P-II SG48_RS02330 PF00909 Ammonium Transporter Family SG48_RS02340 PF09619 Type III secretion system lipoprotein chaperone (YscW) SG48_RS02345 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SG48_RS02350 PF07237 Protein of unknown function (DUF1428) SG48_RS02355 PF00563 EAL domain SG48_RS02355 PF12792 CSS motif domain associated with EAL SG48_RS02360 PF10777 Inner membrane protein YlaC SG48_RS02365 PF12464 Maltose acetyltransferase SG48_RS02365 PF14602 Hexapeptide repeat of succinyl-transferase SG48_RS02370 PF05321 Haemolysin expression modulating protein SG48_RS02375 PF10757 Biofilm formation regulator YbaJ SG48_RS02380 PF00873 AcrB/AcrD/AcrF family SG48_RS02385 PF00529 HlyD membrane-fusion protein of T1SS SG48_RS02385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SG48_RS02390 PF08361 MAATS-type transcriptional repressor, C-terminal region SG48_RS02390 PF00440 Bacterial regulatory proteins, tetR family SG48_RS02395 PF00924 Mechanosensitive ion channel SG48_RS02395 PF12794 Mechanosensitive ion channel inner membrane domain 1 SG48_RS02395 PF12795 Mechanosensitive ion channel porin domain SG48_RS02405 PF10689 Protein of unknown function (DUF2496) SG48_RS02410 PF07445 Primosomal replication protein priC SG48_RS02415 PF04304 Protein of unknown function (DUF454) SG48_RS02420 PF00156 Phosphoribosyl transferase domain SG48_RS02425 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding SG48_RS02425 PF12169 DNA polymerase III subunits gamma and tau domain III SG48_RS02425 PF12170 DNA polymerase III tau subunit V interacting with alpha SG48_RS02430 PF02575 YbaB/EbfC DNA-binding family SG48_RS02435 PF13662 Toprim domain SG48_RS02435 PF02132 RecR protein SG48_RS02440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS02440 PF00183 Hsp90 protein SG48_RS02445 PF05191 Adenylate kinase, active site lid SG48_RS02450 PF00762 Ferrochelatase SG48_RS02455 PF07859 alpha/beta hydrolase fold SG48_RS02460 PF00294 pfkB family carbohydrate kinase SG48_RS02465 PF00999 Sodium/hydrogen exchanger family SG48_RS02465 PF02254 TrkA-N domain SG48_RS02470 PF07690 Major Facilitator Superfamily SG48_RS02475 PF00149 Calcineurin-like phosphoesterase SG48_RS02475 PF02872 5'-nucleotidase, C-terminal domain SG48_RS02480 PF04073 Aminoacyl-tRNA editing domain SG48_RS02485 PF01963 TraB family SG48_RS02490 PF01381 Helix-turn-helix SG48_RS02495 PF00403 Heavy-metal-associated domain SG48_RS02500 PF04960 Glutaminase SG48_RS02505 PF13520 Amino acid permease SG48_RS02510 PF13411 MerR HTH family regulatory protein SG48_RS02515 PF01957 NfeD-like C-terminal, partner-binding SG48_RS02520 PF16200 C-terminal region of band_7 SG48_RS02520 PF01145 SPFH domain / Band 7 family SG48_RS02525 PF00005 ABC transporter SG48_RS02530 PF03649 Uncharacterised protein family (UPF0014) SG48_RS02535 PF00085 Thioredoxin SG48_RS02540 PF00106 short chain dehydrogenase SG48_RS02545 PF13472 GDSL-like Lipase/Acylhydrolase family SG48_RS02550 PF00005 ABC transporter SG48_RS02560 PF14220 Domain of unknown function (DUF4329) SG48_RS02560 PF05593 RHS Repeat SG48_RS02560 PF03527 RHS protein SG48_RS02565 PF15631 NTF2 fold immunity protein SG48_RS02570 PF03527 RHS protein SG48_RS02590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS02590 PF03466 LysR substrate binding domain SG48_RS02595 PF04115 Ureidoglycolate lyase SG48_RS02600 PF01614 Bacterial transcriptional regulator SG48_RS02600 PF09339 IclR helix-turn-helix domain SG48_RS02605 PF00205 Thiamine pyrophosphate enzyme, central domain SG48_RS02605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SG48_RS02605 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SG48_RS02610 PF01261 Xylose isomerase-like TIM barrel SG48_RS02615 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SG48_RS02615 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SG48_RS02620 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin SG48_RS02625 PF01979 Amidohydrolase family SG48_RS02630 PF00860 Permease family SG48_RS02635 PF02595 Glycerate kinase family SG48_RS02640 PF07883 Cupin domain SG48_RS02640 PF05899 Protein of unknown function (DUF861) SG48_RS02645 PF01546 Peptidase family M20/M25/M40 SG48_RS02650 PF02615 Malate/L-lactate dehydrogenase SG48_RS02655 PF02629 CoA binding domain SG48_RS02655 PF00549 CoA-ligase SG48_RS02660 PF06545 Protein of unknown function (DUF1116) SG48_RS02665 PF11392 Protein of unknown function (DUF2877) SG48_RS02670 PF00696 Amino acid kinase family SG48_RS02675 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SG48_RS02675 PF02222 ATP-grasp domain SG48_RS02680 PF00731 AIR carboxylase SG48_RS02685 PF12850 Calcineurin-like phosphoesterase superfamily domain SG48_RS02690 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SG48_RS02695 PF09190 DALR domain SG48_RS02695 PF01406 tRNA synthetases class I (C) catalytic domain SG48_RS02700 PF04307 LexA-binding, inner membrane-associated putative hydrolase SG48_RS02710 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SG48_RS02710 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SG48_RS02715 PF00419 Fimbrial protein SG48_RS02720 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SG48_RS02720 PF02753 Pili assembly chaperone PapD, C-terminal domain SG48_RS02725 PF00577 Outer membrane usher protein SG48_RS02725 PF13954 PapC N-terminal domain SG48_RS02725 PF13953 PapC C-terminal domain SG48_RS02730 PF00419 Fimbrial protein SG48_RS02735 PF00419 Fimbrial protein SG48_RS02740 PF00072 Response regulator receiver domain SG48_RS02740 PF00196 Bacterial regulatory proteins, luxR family SG48_RS02750 PF00589 Phage integrase family SG48_RS02760 PF06992 Replication protein P SG48_RS02770 PF01527 Transposase SG48_RS02775 PF00665 Integrase core domain SG48_RS02775 PF13333 Integrase core domain SG48_RS02775 PF13276 HTH-like domain SG48_RS02785 PF00893 Small Multidrug Resistance protein SG48_RS02795 PF13408 Recombinase zinc beta ribbon domain SG48_RS02795 PF00239 Resolvase, N terminal domain SG48_RS02795 PF07508 Recombinase SG48_RS02800 PF01161 Phosphatidylethanolamine-binding protein SG48_RS02805 PF12833 Helix-turn-helix domain SG48_RS02820 PF07102 Protein of unknown function (DUF1364) SG48_RS02825 PF05866 Endodeoxyribonuclease RusA SG48_RS02835 PF06530 Phage antitermination protein Q SG48_RS02845 PF05598 Transposase domain (DUF772) SG48_RS02845 PF01609 Transposase DDE domain SG48_RS02850 PF00267 Gram-negative porin SG48_RS02855 PF04971 Bacteriophage P21 holin S SG48_RS02860 PF00959 Phage lysozyme SG48_RS02865 PF03245 Bacteriophage Rz lysis protein SG48_RS02870 PF06291 Bor protein SG48_RS02880 PF07166 Protein of unknown function (DUF1398) SG48_RS02890 PF13132 Domain of unknown function (DUF3950) SG48_RS02900 PF07471 Phage DNA packaging protein Nu1 SG48_RS02905 PF02413 Caudovirales tail fibre assembly protein, lambda gpK SG48_RS02910 PF08242 Methyltransferase domain SG48_RS02920 PF12833 Helix-turn-helix domain SG48_RS02925 PF01278 Omptin family SG48_RS02935 PF12833 Helix-turn-helix domain SG48_RS02940 PF14488 Domain of unknown function (DUF4434) SG48_RS02945 PF13283 Bacteriophage N adsorption protein A C-term SG48_RS02950 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain SG48_RS02950 PF13632 Glycosyl transferase family group 2 SG48_RS02955 PF00672 HAMP domain SG48_RS02955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS02955 PF00512 His Kinase A (phospho-acceptor) domain SG48_RS02960 PF00072 Response regulator receiver domain SG48_RS02960 PF00486 Transcriptional regulatory protein, C terminal SG48_RS02965 PF02321 Outer membrane efflux protein SG48_RS02970 PF11604 Copper binding periplasmic protein CusF SG48_RS02975 PF00529 HlyD membrane-fusion protein of T1SS SG48_RS02975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SG48_RS02980 PF00873 AcrB/AcrD/AcrF family SG48_RS02985 PF00324 Amino acid permease SG48_RS02990 PF00924 Mechanosensitive ion channel SG48_RS02995 PF00881 Nitroreductase family SG48_RS03000 PF04237 YjbR SG48_RS03005 PF06643 Protein of unknown function (DUF1158) SG48_RS03010 PF04107 Glutamate-cysteine ligase family 2(GCS2) SG48_RS03020 PF01848 Hok/gef family SG48_RS03025 PF01609 Transposase DDE domain SG48_RS03030 PF01648 4'-phosphopantetheinyl transferase superfamily SG48_RS03030 PF17837 4'-phosphopantetheinyl transferase N-terminal domain SG48_RS03035 PF07715 TonB-dependent Receptor Plug Domain SG48_RS03035 PF00593 TonB dependent receptor SG48_RS03040 PF11806 Domain of unknown function (DUF3327) SG48_RS03040 PF00756 Putative esterase SG48_RS03045 PF03621 MbtH-like protein SG48_RS03050 PF00668 Condensation domain SG48_RS03050 PF13193 AMP-binding enzyme C-terminal domain SG48_RS03050 PF00501 AMP-binding enzyme SG48_RS03050 PF00975 Thioesterase domain SG48_RS03050 PF00550 Phosphopantetheine attachment site SG48_RS03055 PF02706 Chain length determinant protein SG48_RS03060 PF00005 ABC transporter SG48_RS03065 PF01032 FecCD transport family SG48_RS03070 PF01032 FecCD transport family SG48_RS03075 PF05977 Transmembrane secretion effector SG48_RS03080 PF01497 Periplasmic binding protein SG48_RS03085 PF00425 chorismate binding enzyme SG48_RS03090 PF00501 AMP-binding enzyme SG48_RS03090 PF13193 AMP-binding enzyme C-terminal domain SG48_RS03095 PF00550 Phosphopantetheine attachment site SG48_RS03095 PF00857 Isochorismatase family SG48_RS03105 PF03061 Thioesterase superfamily SG48_RS03110 PF13722 5TM C-terminal transporter carbon starvation CstA SG48_RS03110 PF02554 Carbon starvation protein CstA SG48_RS03115 PF04328 Selenoprotein, putative SG48_RS03120 PF00465 Iron-containing alcohol dehydrogenase SG48_RS03125 PF00155 Aminotransferase class I and II SG48_RS03130 PF02195 ParB-like nuclease domain SG48_RS03135 PF01507 Phosphoadenosine phosphosulfate reductase family SG48_RS03135 PF11922 Domain of unknown function (DUF3440) SG48_RS03140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS03140 PF03466 LysR substrate binding domain SG48_RS03145 PF13098 Thioredoxin-like domain SG48_RS03150 PF10417 C-terminal domain of 1-Cys peroxiredoxin SG48_RS03150 PF00578 AhpC/TSA family SG48_RS03155 PF13192 Thioredoxin domain SG48_RS03155 PF07992 Pyridine nucleotide-disulphide oxidoreductase SG48_RS03160 PF00582 Universal stress protein family SG48_RS03165 PF00107 Zinc-binding dehydrogenase SG48_RS03165 PF13823 Alcohol dehydrogenase GroES-associated SG48_RS03165 PF08240 Alcohol dehydrogenase GroES-like domain SG48_RS03175 PF14760 Rnk N-terminus SG48_RS03175 PF01272 Transcription elongation factor, GreA/GreB, C-term SG48_RS03180 PF00445 Ribonuclease T2 family SG48_RS03185 PF00939 Sodium:sulfate symporter transmembrane region SG48_RS03190 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase SG48_RS03195 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase SG48_RS03200 PF04223 Citrate lyase, alpha subunit (CitF) SG48_RS03205 PF03328 HpcH/HpaI aldolase/citrate lyase family SG48_RS03210 PF06857 Malonate decarboxylase delta subunit (MdcD) SG48_RS03215 PF08218 Citrate lyase ligase C-terminal domain SG48_RS03220 PF17203 Single cache domain 3 SG48_RS03220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS03220 PF00989 PAS fold SG48_RS03220 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SG48_RS03225 PF00072 Response regulator receiver domain SG48_RS03225 PF12431 Transcriptional regulator SG48_RS03230 PF03606 C4-dicarboxylate anaerobic carrier SG48_RS03235 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP SG48_RS03240 PF00313 'Cold-shock' DNA-binding domain SG48_RS03245 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SG48_RS03255 PF02416 mttA/Hcf106 family SG48_RS03260 PF04055 Radical SAM superfamily SG48_RS03260 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family SG48_RS03265 PF03466 LysR substrate binding domain SG48_RS03265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS03275 PF03099 Biotin/lipoate A/B protein ligase family SG48_RS03280 PF04359 Protein of unknown function (DUF493) SG48_RS03285 PF00768 D-alanyl-D-alanine carboxypeptidase SG48_RS03285 PF07943 Penicillin-binding protein 5, C-terminal domain SG48_RS03290 PF05036 Sporulation related domain SG48_RS03290 PF03330 Lytic transglycolase SG48_RS03295 PF01098 Cell cycle protein SG48_RS03300 PF00905 Penicillin binding protein transpeptidase domain SG48_RS03300 PF03717 Penicillin-binding Protein dimerisation domain SG48_RS03305 PF02590 Predicted SPOUT methyltransferase SG48_RS03315 PF00300 Histidine phosphatase superfamily (branch 1) SG48_RS03320 PF01467 Cytidylyltransferase-like SG48_RS03325 PF14840 Processivity clamp loader gamma complex DNA pol III C-term SG48_RS03325 PF06144 DNA polymerase III, delta subunit SG48_RS03330 PF04390 Lipopolysaccharide-assembly SG48_RS03335 PF00133 tRNA synthetases class I (I, L, M and V) SG48_RS03335 PF08264 Anticodon-binding domain of tRNA SG48_RS03335 PF13603 Leucyl-tRNA synthetase, Domain 2 SG48_RS03340 PF07295 Zinc-ribbon containing domain SG48_RS03345 PF08238 Sel1 repeat SG48_RS03350 PF06889 Protein of unknown function (DUF1266) SG48_RS03360 PF08238 Sel1 repeat SG48_RS03365 PF06889 Protein of unknown function (DUF1266) SG48_RS03375 PF00012 Hsp70 protein SG48_RS03380 PF01156 Inosine-uridine preferring nucleoside hydrolase SG48_RS03385 PF00005 ABC transporter SG48_RS03390 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS03395 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS03400 PF00497 Bacterial extracellular solute-binding proteins, family 3 SG48_RS03405 PF05598 Transposase domain (DUF772) SG48_RS03405 PF01609 Transposase DDE domain SG48_RS03410 PF00795 Carbon-nitrogen hydrolase SG48_RS03415 PF03471 Transporter associated domain SG48_RS03415 PF00571 CBS domain SG48_RS03420 PF02130 Uncharacterized protein family UPF0054 SG48_RS03425 PF02562 PhoH-like protein SG48_RS03430 PF04055 Radical SAM superfamily SG48_RS03430 PF01938 TRAM domain SG48_RS03430 PF00919 Uncharacterized protein family UPF0004 SG48_RS03435 PF01494 FAD binding domain SG48_RS03475 PF00733 Asparagine synthase SG48_RS03475 PF13537 Glutamine amidotransferase domain SG48_RS03480 PF13344 Haloacid dehalogenase-like hydrolase SG48_RS03485 PF01047 MarR family SG48_RS03485 PF00480 ROK family SG48_RS03490 PF01979 Amidohydrolase family SG48_RS03495 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SG48_RS03500 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SG48_RS03500 PF02378 Phosphotransferase system, EIIC SG48_RS03500 PF00367 phosphotransferase system, EIIB SG48_RS03505 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain SG48_RS03505 PF00749 tRNA synthetases class I (E and Q), catalytic domain SG48_RS03510 PF03573 outer membrane porin, OprD family SG48_RS03515 PF13982 YbfN-like lipoprotein SG48_RS03520 PF01475 Ferric uptake regulator family SG48_RS03535 PF00258 Flavodoxin SG48_RS03540 PF01402 Ribbon-helix-helix protein, copG family SG48_RS03545 PF12697 Alpha/beta hydrolase family SG48_RS03550 PF03925 SeqA protein C-terminal domain SG48_RS03550 PF17206 SeqA protein N-terminal domain SG48_RS03555 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SG48_RS03555 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SG48_RS03555 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SG48_RS03555 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SG48_RS03575 PF13520 Amino acid permease SG48_RS03580 PF01276 Orn/Lys/Arg decarboxylase, major domain SG48_RS03580 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain SG48_RS03580 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SG48_RS03590 PF00072 Response regulator receiver domain SG48_RS03590 PF00486 Transcriptional regulatory protein, C terminal SG48_RS03595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS03595 PF13492 GAF domain SG48_RS03595 PF00512 His Kinase A (phospho-acceptor) domain SG48_RS03595 PF02702 Osmosensitive K+ channel His kinase sensor domain SG48_RS03595 PF13493 Domain of unknown function (DUF4118) SG48_RS03600 PF02669 K+-transporting ATPase, c chain SG48_RS03610 PF03814 Potassium-transporting ATPase A subunit SG48_RS03615 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) SG48_RS03620 PF10725 Protein of unknown function (DUF2517) SG48_RS03625 PF05593 RHS Repeat SG48_RS03625 PF03527 RHS protein SG48_RS03635 PF05593 RHS Repeat SG48_RS03635 PF03527 RHS protein SG48_RS03645 PF13808 DDE_Tnp_1-associated SG48_RS03650 PF01609 Transposase DDE domain SG48_RS03650 PF13808 DDE_Tnp_1-associated SG48_RS03655 PF01609 Transposase DDE domain SG48_RS03655 PF13808 DDE_Tnp_1-associated SG48_RS03660 PF08349 Protein of unknown function (DUF1722) SG48_RS03665 PF03441 FAD binding domain of DNA photolyase SG48_RS03665 PF00875 DNA photolyase SG48_RS03670 PF00854 POT family SG48_RS03675 PF01784 NIF3 (NGG1p interacting factor 3) SG48_RS03680 PF02682 Carboxyltransferase domain, subdomain C and D SG48_RS03685 PF02626 Carboxyltransferase domain, subdomain A and B SG48_RS03690 PF03746 LamB/YcsF family SG48_RS03695 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SG48_RS03695 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SG48_RS03695 PF06827 Zinc finger found in FPG and IleRS SG48_RS03700 PF05145 Transition state regulatory protein AbrB SG48_RS03705 PF00419 Fimbrial protein SG48_RS03710 PF02753 Pili assembly chaperone PapD, C-terminal domain SG48_RS03710 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SG48_RS03715 PF13953 PapC C-terminal domain SG48_RS03715 PF00577 Outer membrane usher protein SG48_RS03715 PF13954 PapC N-terminal domain SG48_RS03720 PF00419 Fimbrial protein SG48_RS03725 PF00285 Citrate synthase, C-terminal domain SG48_RS03735 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SG48_RS03740 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SG48_RS03745 PF00890 FAD binding domain SG48_RS03745 PF02910 Fumarate reductase flavoprotein C-term SG48_RS03750 PF13085 2Fe-2S iron-sulfur cluster binding domain SG48_RS03760 PF00676 Dehydrogenase E1 component SG48_RS03760 PF16870 2-oxoglutarate dehydrogenase C-terminal SG48_RS03760 PF16078 2-oxoglutarate dehydrogenase N-terminus SG48_RS03760 PF02779 Transketolase, pyrimidine binding domain SG48_RS03765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SG48_RS03765 PF02817 e3 binding domain SG48_RS03765 PF00364 Biotin-requiring enzyme SG48_RS03770 PF00549 CoA-ligase SG48_RS03770 PF08442 ATP-grasp domain SG48_RS03775 PF00549 CoA-ligase SG48_RS03775 PF02629 CoA binding domain SG48_RS03780 PF00392 Bacterial regulatory proteins, gntR family SG48_RS03780 PF07702 UTRA domain SG48_RS03785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SG48_RS03785 PF02378 Phosphotransferase system, EIIC SG48_RS03785 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SG48_RS03790 PF07748 Glycosyl hydrolases family 38 C-terminal domain SG48_RS03790 PF09261 Alpha mannosidase middle domain SG48_RS03790 PF01074 Glycosyl hydrolases family 38 N-terminal domain SG48_RS03800 PF01654 Cytochrome bd terminal oxidase subunit I SG48_RS03805 PF02322 Cytochrome bd terminal oxidase subunit II SG48_RS03810 PF08173 Membrane bound YbgT-like protein SG48_RS03815 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) SG48_RS03820 PF03061 Thioesterase superfamily SG48_RS03825 PF01618 MotA/TolQ/ExbB proton channel family SG48_RS03830 PF02472 Biopolymer transport protein ExbD/TolR SG48_RS03835 PF06519 TolA C-terminal SG48_RS03840 PF07676 WD40-like Beta Propeller Repeat SG48_RS03840 PF04052 TolB amino-terminal domain SG48_RS03845 PF00691 OmpA family SG48_RS03850 PF16331 TolA binding protein trimerisation SG48_RS03850 PF13174 Tetratricopeptide repeat SG48_RS03890 PF02445 Quinolinate synthetase A protein SG48_RS03895 PF04973 Nicotinamide mononucleotide transporter SG48_RS03900 PF01545 Cation efflux family SG48_RS03905 PF13985 YbgS-like protein SG48_RS03915 PF00793 DAHP synthetase I family SG48_RS03920 PF00300 Histidine phosphatase superfamily (branch 1) SG48_RS03925 PF01263 Aldose 1-epimerase SG48_RS03930 PF00288 GHMP kinases N terminal domain SG48_RS03930 PF08544 GHMP kinases C terminal SG48_RS03930 PF10509 Galactokinase galactose-binding signature SG48_RS03935 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SG48_RS03935 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SG48_RS03940 PF16363 GDP-mannose 4,6 dehydratase SG48_RS03945 PF00005 ABC transporter SG48_RS03950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS03950 PF03459 TOBE domain SG48_RS03955 PF10766 Multidrug efflux pump-associated protein AcrZ SG48_RS03965 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS03970 PF00005 ABC transporter SG48_RS03970 PF03459 TOBE domain SG48_RS03980 PF10282 Lactonase, 7-bladed beta-propeller SG48_RS03985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS03985 PF03466 LysR substrate binding domain SG48_RS03990 PF04303 PrpF protein SG48_RS03995 PF00939 Sodium:sulfate symporter transmembrane region SG48_RS04000 PF00330 Aconitase family (aconitate hydratase) SG48_RS04000 PF00694 Aconitase C-terminal domain SG48_RS04005 PF01095 Pectinesterase SG48_RS04010 PF01161 Phosphatidylethanolamine-binding protein SG48_RS04015 PF00202 Aminotransferase class-III SG48_RS04020 PF06968 Biotin and Thiamin Synthesis associated domain SG48_RS04020 PF04055 Radical SAM superfamily SG48_RS04025 PF00155 Aminotransferase class I and II SG48_RS04030 PF08241 Methyltransferase domain SG48_RS04040 PF02151 UvrB/uvrC motif SG48_RS04040 PF04851 Type III restriction enzyme, res subunit SG48_RS04040 PF17757 UvrB interaction domain SG48_RS04040 PF00271 Helicase conserved C-terminal domain SG48_RS04040 PF12344 Ultra-violet resistance protein B SG48_RS04045 PF01933 Uncharacterised protein family UPF0052 SG48_RS04055 PF06463 Molybdenum Cofactor Synthesis C SG48_RS04055 PF04055 Radical SAM superfamily SG48_RS04060 PF00994 Probable molybdopterin binding domain SG48_RS04065 PF01967 MoaC family SG48_RS04070 PF02597 ThiS family SG48_RS04075 PF02391 MoaE protein SG48_RS04080 PF01027 Inhibitor of apoptosis-promoting Bax1 SG48_RS04085 PF01027 Inhibitor of apoptosis-promoting Bax1 SG48_RS04090 PF03706 Lysylphosphatidylglycerol synthase TM region SG48_RS04095 PF13091 PLD-like domain SG48_RS04100 PF03372 Endonuclease/Exonuclease/phosphatase family SG48_RS04105 PF11076 Putative inner membrane protein YbhQ SG48_RS04120 PF00005 ABC transporter SG48_RS04125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SG48_RS04130 PF00440 Bacterial regulatory proteins, tetR family SG48_RS04130 PF09209 Tetracyclin repressor-like, C-terminal domain SG48_RS04135 PF00270 DEAD/DEAH box helicase SG48_RS04135 PF00271 Helicase conserved C-terminal domain SG48_RS04140 PF08719 Domain of unknown function (DUF1768) SG48_RS04145 PF13307 Helicase C-terminal domain SG48_RS04145 PF06733 DEAD_2 SG48_RS04145 PF00270 DEAD/DEAH box helicase SG48_RS04150 PF02885 Glycosyl transferase family, helical bundle domain SG48_RS04155 PF02615 Malate/L-lactate dehydrogenase SG48_RS04160 PF07338 Protein of unknown function (DUF1471) SG48_RS04165 PF01258 Prokaryotic dksA/traR C4-type zinc finger SG48_RS04170 PF13640 2OG-Fe(II) oxygenase superfamily SG48_RS04170 PF18331 PKHD-type hydroxylase C-terminal domain SG48_RS04175 PF00593 TonB dependent receptor SG48_RS04175 PF07715 TonB-dependent Receptor Plug Domain SG48_RS04180 PF07338 Protein of unknown function (DUF1471) SG48_RS04185 PF05971 RNA methyltransferase SG48_RS04190 PF00924 Mechanosensitive ion channel SG48_RS04195 PF00005 ABC transporter SG48_RS04200 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS04205 PF00497 Bacterial extracellular solute-binding proteins, family 3 SG48_RS04215 PF00210 Ferritin-like domain SG48_RS04220 PF00892 EamA-like transporter family SG48_RS04225 PF13505 Outer membrane protein beta-barrel domain SG48_RS04230 PF00884 Sulfatase SG48_RS04240 PF01325 Iron dependent repressor, N-terminal DNA binding domain SG48_RS04240 PF02742 Iron dependent repressor, metal binding and dimerisation domain SG48_RS04245 PF03600 Citrate transporter SG48_RS04250 PF03734 L,D-transpeptidase catalytic domain SG48_RS04250 PF17969 L,D-transpeptidase C-terminal domain SG48_RS04255 PF00005 ABC transporter SG48_RS04255 PF12848 ABC transporter SG48_RS04260 PF07350 Protein of unknown function (DUF1479) SG48_RS04270 PF02901 Pyruvate formate lyase-like SG48_RS04270 PF01228 Glycine radical SG48_RS04275 PF04055 Radical SAM superfamily SG48_RS04280 PF00923 Transaldolase/Fructose-6-phosphate aldolase SG48_RS04285 PF00899 ThiF family SG48_RS04290 PF03454 MoeA C-terminal region (domain IV) SG48_RS04290 PF03453 MoeA N-terminal region (domain I and II) SG48_RS04290 PF00994 Probable molybdopterin binding domain SG48_RS04295 PF01112 Asparaginase SG48_RS04300 PF00005 ABC transporter SG48_RS04300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SG48_RS04305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SG48_RS04310 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS04315 PF12911 N-terminal TM domain of oligopeptide transport permease C SG48_RS04315 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS04320 PF17153 Periplasmic sensor domain, extracellular SG48_RS04320 PF00563 EAL domain SG48_RS04325 PF00990 Diguanylate cyclase, GGDEF domain SG48_RS04325 PF17156 Gammaproteobacterial periplasmic sensor domain SG48_RS04330 PF04055 Radical SAM superfamily SG48_RS04330 PF00919 Uncharacterized protein family UPF0004 SG48_RS04330 PF18693 TRAM domain SG48_RS04335 PF10799 Biofilm formation protein (YliH/bssR) SG48_RS04340 PF07995 Glucose / Sorbosone dehydrogenase SG48_RS04345 PF13417 Glutathione S-transferase, N-terminal domain SG48_RS04345 PF00043 Glutathione S-transferase, C-terminal domain SG48_RS04350 PF00768 D-alanyl-D-alanine carboxypeptidase SG48_RS04350 PF07943 Penicillin-binding protein 5, C-terminal domain SG48_RS04355 PF08220 DeoR-like helix-turn-helix domain SG48_RS04355 PF00455 DeoR C terminal sensor domain SG48_RS04360 PF01569 PAP2 superfamily SG48_RS04365 PF07690 Major Facilitator Superfamily SG48_RS04380 PF07690 Major Facilitator Superfamily SG48_RS04385 PF00440 Bacterial regulatory proteins, tetR family SG48_RS04390 PF06826 Predicted Permease Membrane Region SG48_RS04390 PF02080 TrkA-C domain SG48_RS04395 PF11045 Putative inner membrane protein of Enterobacteriaceae SG48_RS04400 PF00462 Glutaredoxin SG48_RS04405 PF07214 Protein of unknown function (DUF1418) SG48_RS04410 PF00881 Nitroreductase family SG48_RS04415 PF08443 RimK-like ATP-grasp domain SG48_RS04415 PF18030 RimK PreATP-grasp domain SG48_RS04420 PF10722 Putative bacterial sensory transduction regulator SG48_RS04430 PF13416 Bacterial extracellular solute-binding protein SG48_RS04435 PF08402 TOBE domain SG48_RS04435 PF00005 ABC transporter SG48_RS04440 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS04445 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS04450 PF10767 Protein of unknown function (DUF2593) SG48_RS04455 PF05958 tRNA (Uracil-5-)-methyltransferase SG48_RS04460 PF00497 Bacterial extracellular solute-binding proteins, family 3 SG48_RS04465 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS04470 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS04475 PF00497 Bacterial extracellular solute-binding proteins, family 3 SG48_RS04480 PF00005 ABC transporter SG48_RS04485 PF12883 Protein of unknown function (DUF3828) SG48_RS04490 PF01906 Putative heavy-metal-binding SG48_RS04495 PF01510 N-acetylmuramoyl-L-alanine amidase SG48_RS04500 PF01370 NAD dependent epimerase/dehydratase family SG48_RS04505 PF13460 NAD(P)H-binding SG48_RS04505 PF11066 Protein of unknown function (DUF2867) SG48_RS04510 PF01212 Beta-eliminating lyase SG48_RS04515 PF00205 Thiamine pyrophosphate enzyme, central domain SG48_RS04515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SG48_RS04515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SG48_RS04520 PF00970 Oxidoreductase FAD-binding domain SG48_RS04520 PF00175 Oxidoreductase NAD-binding domain SG48_RS04520 PF00111 2Fe-2S iron-sulfur cluster binding domain SG48_RS04525 PF03063 Prismane/CO dehydrogenase family SG48_RS04530 PF03956 Lysine exporter LysO SG48_RS04535 PF00230 Major intrinsic protein SG48_RS04545 PF11398 Protein of unknown function (DUF2813) SG48_RS04550 PF04393 Protein of unknown function (DUF535) SG48_RS04555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SG48_RS04560 PF00005 ABC transporter SG48_RS04560 PF02687 FtsX-like permease family SG48_RS04560 PF12704 MacB-like periplasmic core domain SG48_RS04565 PF00313 'Cold-shock' DNA-binding domain SG48_RS04570 PF02617 ATP-dependent Clp protease adaptor protein ClpS SG48_RS04575 PF02861 Clp amino terminal domain, pathogenicity island component SG48_RS04575 PF17871 AAA lid domain SG48_RS04575 PF07724 AAA domain (Cdc48 subfamily) SG48_RS04575 PF00004 ATPase family associated with various cellular activities (AAA) SG48_RS04575 PF10431 C-terminal, D2-small domain, of ClpB protein SG48_RS04585 PF01176 Translation initiation factor 1A / IF-1 SG48_RS04590 PF03588 Leucyl/phenylalanyl-tRNA protein transferase SG48_RS04595 PF00664 ABC transporter transmembrane region SG48_RS04595 PF00005 ABC transporter SG48_RS04600 PF00005 ABC transporter SG48_RS04600 PF00664 ABC transporter transmembrane region SG48_RS04605 PF07992 Pyridine nucleotide-disulphide oxidoreductase SG48_RS04610 PF01037 Lrp/AsnC ligand binding domain SG48_RS04615 PF17854 FtsK alpha domain SG48_RS04615 PF01580 FtsK/SpoIIIE family SG48_RS04615 PF09397 Ftsk gamma domain SG48_RS04615 PF13491 4TM region of DNA translocase FtsK/SpoIIIE SG48_RS04620 PF03548 Outer membrane lipoprotein carrier protein LolA SG48_RS04625 PF12002 MgsA AAA+ ATPase C terminal SG48_RS04625 PF00004 ATPase family associated with various cellular activities (AAA) SG48_RS04625 PF16193 AAA C-terminal domain SG48_RS04630 PF02403 Seryl-tRNA synthetase N-terminal domain SG48_RS04630 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SG48_RS04635 PF01568 Molydopterin dinucleotide binding domain SG48_RS04635 PF00384 Molybdopterin oxidoreductase SG48_RS04635 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SG48_RS04640 PF12800 4Fe-4S binding domain SG48_RS04640 PF13247 4Fe-4S dicluster domain SG48_RS04645 PF04976 DMSO reductase anchor subunit (DmsC) SG48_RS04650 PF00857 Isochorismatase family SG48_RS04655 PF07690 Major Facilitator Superfamily SG48_RS04660 PF13520 Amino acid permease SG48_RS04665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS04665 PF03466 LysR substrate binding domain SG48_RS04670 PF02525 Flavodoxin-like fold SG48_RS04675 PF04055 Radical SAM superfamily SG48_RS04680 PF02901 Pyruvate formate lyase-like SG48_RS04680 PF01228 Glycine radical SG48_RS04685 PF01226 Formate/nitrite transporter SG48_RS04690 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding SG48_RS04690 PF18381 YcaO cyclodehydratase C-terminal domain SG48_RS04695 PF04239 Protein of unknown function (DUF421) SG48_RS04700 PF00266 Aminotransferase class-V SG48_RS04705 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SG48_RS04710 PF01435 Peptidase family M48 SG48_RS04715 PF02224 Cytidylate kinase SG48_RS04720 PF00575 S1 RNA binding domain SG48_RS04725 PF00216 Bacterial DNA-binding protein SG48_RS04730 PF00753 Metallo-beta-lactamase superfamily SG48_RS04730 PF03772 Competence protein SG48_RS04735 PF00005 ABC transporter SG48_RS04735 PF00664 ABC transporter transmembrane region SG48_RS04740 PF02606 Tetraacyldisaccharide-1-P 4'-kinase SG48_RS04745 PF06224 Winged helix DNA-binding domain SG48_RS04750 PF03966 Trm112p-like protein SG48_RS04755 PF02348 Cytidylyltransferase SG48_RS04760 PF01636 Phosphotransferase enzyme family SG48_RS04765 PF02698 DUF218 domain SG48_RS04770 PF13847 Methyltransferase domain SG48_RS04775 PF03882 MukF winged-helix domain SG48_RS04775 PF17193 MukF C-terminal domain SG48_RS04775 PF17192 MukF middle domain SG48_RS04780 PF04288 MukE-like family SG48_RS04785 PF04310 MukB N-terminal SG48_RS04785 PF16330 MukB hinge domain SG48_RS04790 PF03734 L,D-transpeptidase catalytic domain SG48_RS04790 PF01471 Putative peptidoglycan binding domain SG48_RS04795 PF05951 Bacterial protein of unknown function (DUF882) SG48_RS04800 PF00753 Metallo-beta-lactamase superfamily SG48_RS04805 PF00155 Aminotransferase class I and II SG48_RS04815 PF00267 Gram-negative porin SG48_RS04820 PF00152 tRNA synthetases class II (D, K and N) SG48_RS04820 PF01336 OB-fold nucleic acid binding domain SG48_RS04825 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SG48_RS04825 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SG48_RS04830 PF01433 Peptidase family M1 domain SG48_RS04830 PF11940 Domain of unknown function (DUF3458) Ig-like fold SG48_RS04830 PF17432 Domain of unknown function (DUF3458_C) ARM repeats SG48_RS04835 PF00005 ABC transporter SG48_RS04840 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS04845 PF00296 Luciferase-like monooxygenase SG48_RS04850 PF09084 NMT1/THI5 like SG48_RS04855 PF03358 NADPH-dependent FMN reductase SG48_RS04860 PF00419 Fimbrial protein SG48_RS04865 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SG48_RS04865 PF02753 Pili assembly chaperone PapD, C-terminal domain SG48_RS04870 PF13953 PapC C-terminal domain SG48_RS04870 PF00577 Outer membrane usher protein SG48_RS04870 PF13954 PapC N-terminal domain SG48_RS04875 PF00419 Fimbrial protein SG48_RS04880 PF00419 Fimbrial protein SG48_RS04885 PF00419 Fimbrial protein SG48_RS04890 PF02753 Pili assembly chaperone PapD, C-terminal domain SG48_RS04890 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SG48_RS04895 PF01180 Dihydroorotate dehydrogenase SG48_RS04900 PF07126 Cell-division protein ZapC SG48_RS04905 PF03476 MOSC N-terminal beta barrel domain SG48_RS04905 PF03473 MOSC domain SG48_RS04905 PF00111 2Fe-2S iron-sulfur cluster binding domain SG48_RS04910 PF01170 Putative RNA methylase family UPF0020 SG48_RS04910 PF02926 THUMP domain SG48_RS04910 PF10672 S-adenosylmethionine-dependent methyltransferase SG48_RS04915 PF16326 ABC transporter C-terminal domain SG48_RS04915 PF12848 ABC transporter SG48_RS04915 PF00005 ABC transporter SG48_RS04920 PF04403 Paraquat-inducible protein A SG48_RS04925 PF02470 MlaD protein SG48_RS04930 PF03886 ABC-type transport auxiliary lipoprotein component SG48_RS04935 PF04957 Ribosome modulation factor SG48_RS04940 PF07977 FabA-like domain SG48_RS04945 PF13654 AAA domain SG48_RS04945 PF05362 Lon protease (S16) C-terminal proteolytic domain SG48_RS04950 PF17414 MatP C-terminal ribbon-helix-helix domain SG48_RS04950 PF06303 MatP N-terminal domain SG48_RS04955 PF00691 OmpA family SG48_RS04955 PF01389 OmpA-like transmembrane domain SG48_RS04965 PF03846 Cell division inhibitor SulA SG48_RS04970 PF04993 TfoX N-terminal domain SG48_RS04970 PF04994 TfoX C-terminal domain SG48_RS04975 PF12805 FUSC-like inner membrane protein yccS SG48_RS04980 PF03733 Inner membrane component domain SG48_RS04985 PF13361 UvrD-like helicase C-terminal domain SG48_RS04985 PF00580 UvrD/REP helicase N-terminal domain SG48_RS04985 PF12462 DNA helicase IV / RNA helicase N terminal SG48_RS04990 PF02142 MGS-like domain SG48_RS04995 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) SG48_RS05005 PF13380 CoA binding domain SG48_RS05010 PF08755 Hemimethylated DNA-binding protein YccV like SG48_RS05015 PF10672 S-adenosylmethionine-dependent methyltransferase SG48_RS05015 PF17785 PUA-like domain SG48_RS05020 PF00708 Acylphosphatase SG48_RS05025 PF04358 DsrC like protein SG48_RS05030 PF01027 Inhibitor of apoptosis-promoting Bax1 SG48_RS05040 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal SG48_RS05040 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SG48_RS05045 PF00374 Nickel-dependent hydrogenase SG48_RS05050 PF01292 Prokaryotic cytochrome b561 SG48_RS05055 PF01750 Hydrogenase maturation protease SG48_RS05060 PF07449 Hydrogenase-1 expression protein HyaE SG48_RS05065 PF04809 HupH hydrogenase expression protein, C-terminal conserved region SG48_RS05070 PF01654 Cytochrome bd terminal oxidase subunit I SG48_RS05075 PF02322 Cytochrome bd terminal oxidase subunit II SG48_RS05080 PF08173 Membrane bound YbgT-like protein SG48_RS05085 PF00328 Histidine phosphatase superfamily (branch 2) SG48_RS05090 PF13614 AAA domain SG48_RS05090 PF02706 Chain length determinant protein SG48_RS05090 PF13807 G-rich domain on putative tyrosine kinase SG48_RS05095 PF01451 Low molecular weight phosphotyrosine protein phosphatase SG48_RS05100 PF10531 SLBB domain SG48_RS05100 PF02563 Polysaccharide biosynthesis/export protein SG48_RS05100 PF18412 Outer-membrane lipoprotein Wza C-terminal domain SG48_RS05105 PF06082 Exopolysaccharide biosynthesis protein YbjH SG48_RS05110 PF06251 Capsule biosynthesis GfcC SG48_RS05115 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF SG48_RS05130 PF03400 IS1 transposase SG48_RS05135 PF00313 'Cold-shock' DNA-binding domain SG48_RS05140 PF00313 'Cold-shock' DNA-binding domain SG48_RS05145 PF15939 Putative antitoxin of bacterial toxin-antitoxin system SG48_RS05150 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system SG48_RS05155 PF12801 4Fe-4S binding domain SG48_RS05160 PF00672 HAMP domain SG48_RS05160 PF01627 Hpt domain SG48_RS05160 PF00512 His Kinase A (phospho-acceptor) domain SG48_RS05160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS05160 PF00072 Response regulator receiver domain SG48_RS05165 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SG48_RS05170 PF00072 Response regulator receiver domain SG48_RS05170 PF00486 Transcriptional regulatory protein, C terminal SG48_RS05175 PF03264 NapC/NirT cytochrome c family, N-terminal region SG48_RS05180 PF00384 Molybdopterin oxidoreductase SG48_RS05180 PF18364 Molybdopterin oxidoreductase N-terminal domain SG48_RS05180 PF01568 Molydopterin dinucleotide binding domain SG48_RS05185 PF02613 Nitrate reductase delta subunit SG48_RS05195 PF00226 DnaJ domain SG48_RS05195 PF01556 DnaJ C terminal domain SG48_RS05205 PF00328 Histidine phosphatase superfamily (branch 2) SG48_RS05210 PF13993 YccJ-like protein SG48_RS05215 PF03358 NADPH-dependent FMN reductase SG48_RS05225 PF10685 Stress-induced bacterial acidophilic repeat motif SG48_RS05230 PF00860 Permease family SG48_RS05235 PF01613 Flavin reductase like domain SG48_RS05240 PF00881 Nitroreductase family SG48_RS05245 PF12697 Alpha/beta hydrolase family SG48_RS05250 PF01042 Endoribonuclease L-PSP SG48_RS05255 PF00857 Isochorismatase family SG48_RS05260 PF00296 Luciferase-like monooxygenase SG48_RS05265 PF00440 Bacterial regulatory proteins, tetR family SG48_RS05265 PF08362 YcdC-like protein, C-terminal region SG48_RS05270 PF18327 Proline utilization A proline dehydrogenase N-terminal domain SG48_RS05270 PF14850 DNA-binding domain of Proline dehydrogenase SG48_RS05270 PF01619 Proline dehydrogenase SG48_RS05270 PF00171 Aldehyde dehydrogenase family SG48_RS05280 PF00474 Sodium:solute symporter family SG48_RS05295 PF09375 Imelysin SG48_RS05295 PF13473 Cupredoxin-like domain SG48_RS05300 PF04261 Dyp-type peroxidase family SG48_RS05310 PF02562 PhoH-like protein SG48_RS05315 PF13994 PgaD-like protein SG48_RS05320 PF00535 Glycosyl transferase family 2 SG48_RS05325 PF14883 Hypothetical glycosyl hydrolase family 13 SG48_RS05325 PF01522 Polysaccharide deacetylase SG48_RS05335 PF17158 Membrane-associated sensor, integral membrane domain SG48_RS05335 PF00990 Diguanylate cyclase, GGDEF domain SG48_RS05340 PF13333 Integrase core domain SG48_RS05340 PF13276 HTH-like domain SG48_RS05340 PF00665 Integrase core domain SG48_RS05345 PF01527 Transposase SG48_RS05370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SG48_RS05375 PF02811 PHP domain SG48_RS05380 PF02613 Nitrate reductase delta subunit SG48_RS05385 PF06496 Protein of unknown function (DUF1097) SG48_RS05390 PF03783 Curli production assembly/transport component CsgG SG48_RS05395 PF10614 Type VIII secretion system (T8SS), CsgF protein SG48_RS05400 PF10627 Curli assembly protein CsgE SG48_RS05405 PF00196 Bacterial regulatory proteins, luxR family SG48_RS05415 PF07012 Curlin associated repeat SG48_RS05420 PF07012 Curlin associated repeat SG48_RS05425 PF10610 Thin aggregative fimbriae synthesis protein SG48_RS05435 PF01661 Macro domain SG48_RS05440 PF13091 PLD-like domain SG48_RS05445 PF01757 Acyltransferase family SG48_RS05460 PF04349 Periplasmic glucan biosynthesis protein, MdoG SG48_RS05465 PF00535 Glycosyl transferase family 2 SG48_RS05470 PF07119 Protein of unknown function (DUF1375) SG48_RS05475 PF13984 MsyB protein SG48_RS05485 PF07690 Major Facilitator Superfamily SG48_RS05490 PF03279 Bacterial lipid A biosynthesis acyltransferase SG48_RS05495 PF00581 Rhodanese-like domain SG48_RS05495 PF12368 Rhodanase C-terminal SG48_RS05495 PF17773 UPF0176 acylphosphatase like domain SG48_RS05500 PF04264 YceI-like domain SG48_RS05505 PF01292 Prokaryotic cytochrome b561 SG48_RS05510 PF10968 Protein of unknown function (DUF2770) SG48_RS05515 PF01266 FAD dependent oxidoreductase SG48_RS05520 PF13991 BssS protein family SG48_RS05525 PF06183 DinI-like family SG48_RS05530 PF01979 Amidohydrolase family SG48_RS05535 PF07273 Protein of unknown function (DUF1439) SG48_RS05540 PF04399 Glutaredoxin 2, C terminal domain SG48_RS05540 PF13417 Glutathione S-transferase, N-terminal domain SG48_RS05545 PF07690 Major Facilitator Superfamily SG48_RS05550 PF13302 Acetyltransferase (GNAT) domain SG48_RS05555 PF04337 Protein of unknown function, DUF480 SG48_RS05560 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SG48_RS05565 PF03023 Lipid II flippase MurJ SG48_RS05570 PF05130 FlgN protein SG48_RS05575 PF04316 Anti-sigma-28 factor, FlgM SG48_RS05580 PF13144 Chaperone for flagella basal body P-ring formation SG48_RS05585 PF00460 Flagella basal body rod protein SG48_RS05590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SG48_RS05590 PF00460 Flagella basal body rod protein SG48_RS05595 PF03963 Flagellar hook capping protein - N-terminal region SG48_RS05595 PF13861 FlgD Tudor-like domain SG48_RS05595 PF13860 FlgD Ig-like domain SG48_RS05600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SG48_RS05600 PF00460 Flagella basal body rod protein SG48_RS05600 PF07559 Flagellar basal body protein FlaE SG48_RS05605 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SG48_RS05605 PF00460 Flagella basal body rod protein SG48_RS05610 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SG48_RS05610 PF00460 Flagella basal body rod protein SG48_RS05615 PF02107 Flagellar L-ring protein SG48_RS05620 PF02119 Flagellar P-ring protein SG48_RS05625 PF10135 Rod binding protein SG48_RS05625 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SG48_RS05630 PF06429 Flagellar basal body rod FlgEFG protein C-terminal SG48_RS05630 PF00460 Flagella basal body rod protein SG48_RS05635 PF00669 Bacterial flagellin N-terminal helical region SG48_RS05640 PF00575 S1 RNA binding domain SG48_RS05640 PF12111 Polyribonucleotide phosphorylase C terminal SG48_RS05640 PF10150 Ribonuclease E/G family SG48_RS05650 PF00849 RNA pseudouridylate synthase SG48_RS05650 PF01479 S4 domain SG48_RS05655 PF02545 Maf-like protein SG48_RS05660 PF02620 Large ribosomal RNA subunit accumulation protein YceD SG48_RS05665 PF01783 Ribosomal L32p protein family SG48_RS05670 PF02504 Fatty acid synthesis protein SG48_RS05675 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SG48_RS05675 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SG48_RS05680 PF00698 Acyl transferase domain SG48_RS05690 PF00550 Phosphopantetheine attachment site SG48_RS05695 PF02801 Beta-ketoacyl synthase, C-terminal domain SG48_RS05695 PF00109 Beta-ketoacyl synthase, N-terminal domain SG48_RS05700 PF01063 Amino-transferase class IV SG48_RS05705 PF02618 YceG-like family SG48_RS05710 PF02223 Thymidylate kinase SG48_RS05715 PF09115 DNA polymerase III, delta subunit, C terminal SG48_RS05720 PF01026 TatD related DNase SG48_RS05725 PF00367 phosphotransferase system, EIIB SG48_RS05725 PF02378 Phosphotransferase system, EIIC SG48_RS05730 PF00593 TonB dependent receptor SG48_RS05730 PF07715 TonB-dependent Receptor Plug Domain SG48_RS05735 PF01230 HIT domain SG48_RS05740 PF07233 Protein of unknown function (DUF1425) SG48_RS05745 PF13036 Peptidoglycan-synthase activator LpoB SG48_RS05750 PF01636 Phosphotransferase enzyme family SG48_RS05755 PF00933 Glycosyl hydrolase family 3 N terminal domain SG48_RS05760 PF05728 Uncharacterised protein family (UPF0227) SG48_RS05765 PF07992 Pyridine nucleotide-disulphide oxidoreductase SG48_RS05770 PF05433 Glycine zipper 2TM domain SG48_RS05775 PF00440 Bacterial regulatory proteins, tetR family SG48_RS05780 PF07338 Protein of unknown function (DUF1471) SG48_RS05785 PF03734 L,D-transpeptidase catalytic domain SG48_RS05785 PF01476 LysM domain SG48_RS05785 PF17969 L,D-transpeptidase C-terminal domain SG48_RS05790 PF02559 CarD-like/TRCF domain SG48_RS05790 PF00271 Helicase conserved C-terminal domain SG48_RS05790 PF00270 DEAD/DEAH box helicase SG48_RS05790 PF03461 TRCF domain SG48_RS05790 PF17757 UvrB interaction domain SG48_RS05795 PF01757 Acyltransferase family SG48_RS05800 PF02687 FtsX-like permease family SG48_RS05800 PF12704 MacB-like periplasmic core domain SG48_RS05805 PF00005 ABC transporter SG48_RS05810 PF12704 MacB-like periplasmic core domain SG48_RS05810 PF02687 FtsX-like permease family SG48_RS05815 PF00480 ROK family SG48_RS05820 PF02146 Sir2 family SG48_RS05825 PF04536 TPM domain SG48_RS05830 PF12158 Protein of unknown function (DUF3592) SG48_RS05835 PF13416 Bacterial extracellular solute-binding protein SG48_RS05840 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS05845 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS05850 PF00005 ABC transporter SG48_RS05850 PF08402 TOBE domain SG48_RS05860 PF07687 Peptidase dimerisation domain SG48_RS05860 PF01546 Peptidase family M20/M25/M40 SG48_RS05865 PF08007 Cupin superfamily protein SG48_RS05870 PF08918 PhoQ Sensor SG48_RS05870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS05875 PF00486 Transcriptional regulatory protein, C terminal SG48_RS05875 PF00072 Response regulator receiver domain SG48_RS05880 PF08328 Adenylosuccinate lyase C-terminal SG48_RS05880 PF00206 Lyase SG48_RS05885 PF04356 Protein of unknown function (DUF489) SG48_RS05895 PF00293 NUDIX domain SG48_RS05900 PF00849 RNA pseudouridylate synthase SG48_RS05905 PF00180 Isocitrate/isopropylmalate dehydrogenase SG48_RS05910 PF08242 Methyltransferase domain SG48_RS05920 PF10463 Peptidase U49 SG48_RS05925 PF00589 Phage integrase family SG48_RS05925 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain SG48_RS05930 PF07825 Excisionase-like protein SG48_RS05940 PF00717 Peptidase S24-like SG48_RS05945 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT SG48_RS05960 PF03354 Phage Terminase SG48_RS05970 PF04860 Phage portal protein SG48_RS05975 PF04865 Baseplate J-like protein SG48_RS05980 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) SG48_RS05990 PF02413 Caudovirales tail fibre assembly protein, lambda gpK SG48_RS05995 PF02413 Caudovirales tail fibre assembly protein, lambda gpK SG48_RS06000 PF07484 Phage Tail Collar Domain SG48_RS06005 PF02796 Helix-turn-helix domain of resolvase SG48_RS06005 PF00239 Resolvase, N terminal domain SG48_RS06010 PF01844 HNH endonuclease SG48_RS06025 PF07166 Protein of unknown function (DUF1398) SG48_RS06030 PF13411 MerR HTH family regulatory protein SG48_RS06035 PF00563 EAL domain SG48_RS06035 PF04940 Sensors of blue-light using FAD SG48_RS06040 PF10798 Biofilm development protein YmgB/AriR SG48_RS06050 PF10798 Biofilm development protein YmgB/AriR SG48_RS06060 PF12792 CSS motif domain associated with EAL SG48_RS06060 PF00563 EAL domain SG48_RS06085 PF16456 YmgD protein SG48_RS06090 PF13436 Glycine-zipper domain SG48_RS06105 PF03776 Septum formation topological specificity factor MinE SG48_RS06110 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SG48_RS06115 PF05209 Septum formation inhibitor MinC, N-terminal domain SG48_RS06115 PF03775 Septum formation inhibitor MinC, C-terminal domain SG48_RS06120 PF05666 Fels-1 Prophage Protein-like SG48_RS06125 PF04151 Bacterial pre-peptidase C-terminal domain SG48_RS06135 PF05166 YcgL domain SG48_RS06140 PF01557 Fumarylacetoacetate (FAA) hydrolase family SG48_RS06145 PF03692 Putative zinc- or iron-chelating domain SG48_RS06150 PF06109 Haemolysin E (HlyE) SG48_RS06155 PF00717 Peptidase S24-like SG48_RS06160 PF11798 IMS family HHH motif SG48_RS06160 PF11799 impB/mucB/samB family C-terminal domain SG48_RS06160 PF00817 impB/mucB/samB family SG48_RS06160 PF13438 Domain of unknown function (DUF4113) SG48_RS06165 PF02600 Disulfide bond formation protein DsbB SG48_RS06170 PF06450 Bacterial Na+/H+ antiporter B (NhaB) SG48_RS06175 PF00392 Bacterial regulatory proteins, gntR family SG48_RS06175 PF07840 FadR C-terminal domain SG48_RS06180 PF04293 SpoVR like protein SG48_RS06185 PF01266 FAD dependent oxidoreductase SG48_RS06190 PF00842 Alanine racemase, C-terminal domain SG48_RS06190 PF01168 Alanine racemase, N-terminal domain SG48_RS06195 PF00999 Sodium/hydrogen exchanger family SG48_RS06195 PF03471 Transporter associated domain SG48_RS06195 PF02080 TrkA-C domain SG48_RS06200 PF02016 LD-carboxypeptidase N-terminal domain SG48_RS06200 PF17676 LD-carboxypeptidase C-terminal domain SG48_RS06205 PF01464 Transglycosylase SLT domain SG48_RS06210 PF07317 Flagellar regulator YcgR SG48_RS06210 PF07238 PilZ domain SG48_RS06215 PF04226 Transglycosylase associated protein SG48_RS06225 PF01204 Trehalase SG48_RS06230 PF03610 PTS system fructose IIA component SG48_RS06230 PF05524 PEP-utilising enzyme, N-terminal SG48_RS06230 PF00391 PEP-utilising enzyme, mobile domain SG48_RS06230 PF00381 PTS HPr component phosphorylation site SG48_RS06235 PF02734 DAK2 domain SG48_RS06240 PF02733 Dak1 domain SG48_RS06245 PF00158 Sigma-54 interaction domain SG48_RS06245 PF00989 PAS fold SG48_RS06245 PF02954 Bacterial regulatory protein, Fis family SG48_RS06250 PF03212 Pertactin SG48_RS06250 PF03797 Autotransporter beta-domain SG48_RS06260 PF06071 Protein of unknown function (DUF933) SG48_RS06260 PF01926 50S ribosome-binding GTPase SG48_RS06265 PF01195 Peptidyl-tRNA hydrolase SG48_RS06270 PF10762 Protein of unknown function (DUF2583) SG48_RS06275 PF01740 STAS domain SG48_RS06275 PF00916 Sulfate permease family SG48_RS06280 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SG48_RS06280 PF14572 Phosphoribosyl synthetase-associated domain SG48_RS06285 PF08544 GHMP kinases C terminal SG48_RS06285 PF00288 GHMP kinases N terminal domain SG48_RS06290 PF03550 Outer membrane lipoprotein LolB SG48_RS06295 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SG48_RS06295 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SG48_RS06295 PF01488 Shikimate / quinate 5-dehydrogenase SG48_RS06300 PF00472 RF-1 domain SG48_RS06300 PF03462 PCRF domain SG48_RS06305 PF13847 Methyltransferase domain SG48_RS06305 PF17827 PrmC N-terminal domain SG48_RS06310 PF04247 Invasion gene expression up-regulator, SirB SG48_RS06315 PF13369 Transglutaminase-like superfamily SG48_RS06320 PF00793 DAHP synthetase I family SG48_RS06325 PF13940 Toxin Ldr, type I toxin-antitoxin system SG48_RS06330 PF13940 Toxin Ldr, type I toxin-antitoxin system SG48_RS06335 PF13940 Toxin Ldr, type I toxin-antitoxin system SG48_RS06340 PF01699 Sodium/calcium exchanger protein SG48_RS06345 PF06150 ChaB SG48_RS06350 PF04752 ChaC-like protein SG48_RS06355 PF02635 DsrE/DsrF-like family SG48_RS06360 PF11924 Inverse autotransporter, beta-domain SG48_RS06365 PF00072 Response regulator receiver domain SG48_RS06365 PF00196 Bacterial regulatory proteins, luxR family SG48_RS06370 PF00672 HAMP domain SG48_RS06370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS06370 PF07730 Histidine kinase SG48_RS06370 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term SG48_RS06380 PF07690 Major Facilitator Superfamily SG48_RS06385 PF00384 Molybdopterin oxidoreductase SG48_RS06385 PF01568 Molydopterin dinucleotide binding domain SG48_RS06385 PF14710 Respiratory nitrate reductase alpha N-terminal SG48_RS06390 PF13247 4Fe-4S dicluster domain SG48_RS06390 PF14711 Respiratory nitrate reductase beta C-terminal SG48_RS06395 PF02613 Nitrate reductase delta subunit SG48_RS06400 PF02665 Nitrate reductase gamma subunit SG48_RS06420 PF00551 Formyl transferase SG48_RS06420 PF01842 ACT domain SG48_RS06425 PF02810 SEC-C motif SG48_RS06430 PF01734 Patatin-like phospholipase SG48_RS06435 PF00072 Response regulator receiver domain SG48_RS06440 PF00483 Nucleotidyl transferase SG48_RS06445 PF00816 H-NS histone family SG48_RS06450 PF00265 Thymidine kinase SG48_RS06455 PF13006 Insertion element 4 transposase N-terminal SG48_RS06455 PF01609 Transposase DDE domain SG48_RS06465 PF00465 Iron-containing alcohol dehydrogenase SG48_RS06465 PF00171 Aldehyde dehydrogenase family SG48_RS06470 PF01914 MarC family integral membrane protein SG48_RS06475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SG48_RS06480 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS06485 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS06485 PF12911 N-terminal TM domain of oligopeptide transport permease C SG48_RS06490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SG48_RS06490 PF00005 ABC transporter SG48_RS06495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SG48_RS06495 PF00005 ABC transporter SG48_RS06500 PF04269 Protein of unknown function, DUF440 SG48_RS06505 PF13396 Phospholipase_D-nuclease N-terminal SG48_RS06505 PF13091 PLD-like domain SG48_RS06515 PF07885 Ion channel SG48_RS06515 PF02254 TrkA-N domain SG48_RS06520 PF03795 YCII-related domain SG48_RS06525 PF03544 Gram-negative bacterial TonB protein C-terminal SG48_RS06530 PF03061 Thioesterase superfamily SG48_RS06535 PF04279 Intracellular septation protein A SG48_RS06545 PF03922 OmpW family SG48_RS06550 PF05974 Domain of unknown function (DUF892) SG48_RS06555 PF05974 Domain of unknown function (DUF892) SG48_RS06560 PF10685 Stress-induced bacterial acidophilic repeat motif SG48_RS06565 PF00290 Tryptophan synthase alpha chain SG48_RS06570 PF00291 Pyridoxal-phosphate dependent enzyme SG48_RS06575 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SG48_RS06575 PF00218 Indole-3-glycerol phosphate synthase SG48_RS06580 PF00117 Glutamine amidotransferase class-I SG48_RS06580 PF02885 Glycosyl transferase family, helical bundle domain SG48_RS06580 PF00591 Glycosyl transferase family, a/b domain SG48_RS06585 PF00425 chorismate binding enzyme SG48_RS06585 PF04715 Anthranilate synthase component I, N terminal region SG48_RS06590 PF02811 PHP domain SG48_RS06595 PF01300 Telomere recombination SG48_RS06600 PF09972 Predicted membrane protein (DUF2207) SG48_RS06605 PF01479 S4 domain SG48_RS06605 PF00849 RNA pseudouridylate synthase SG48_RS06610 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP SG48_RS06610 PF12557 Cob(I)alamin adenosyltransferase N terminal SG48_RS06615 PF00106 short chain dehydrogenase SG48_RS06625 PF08496 Peptidase family S49 N-terminal SG48_RS06625 PF01343 Peptidase family S49 SG48_RS06630 PF10692 Protein of unknown function (DUF2498) SG48_RS06640 PF01396 Topoisomerase DNA binding C4 zinc finger SG48_RS06640 PF01751 Toprim domain SG48_RS06640 PF01131 DNA topoisomerase SG48_RS06640 PF08272 Topoisomerase I zinc-ribbon-like SG48_RS06645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS06645 PF03466 LysR substrate binding domain SG48_RS06665 PF00694 Aconitase C-terminal domain SG48_RS06665 PF00330 Aconitase family (aconitate hydratase) SG48_RS06670 PF00925 GTP cyclohydrolase II SG48_RS06675 PF01569 PAP2 superfamily SG48_RS06680 PF06305 Lipopolysaccharide assembly protein A domain SG48_RS06685 PF18073 Rubredoxin metal binding domain SG48_RS06690 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SG48_RS06695 PF01253 Translation initiation factor SUI1 SG48_RS06700 PF05433 Glycine zipper 2TM domain SG48_RS06705 PF08220 DeoR-like helix-turn-helix domain SG48_RS06705 PF00455 DeoR C terminal sensor domain SG48_RS06715 PF00563 EAL domain SG48_RS06715 PF00990 Diguanylate cyclase, GGDEF domain SG48_RS06715 PF13426 PAS domain SG48_RS06725 PF17876 Cold shock domain SG48_RS06725 PF08206 Ribonuclease B OB domain SG48_RS06725 PF00773 RNB domain SG48_RS06725 PF00575 S1 RNA binding domain SG48_RS06740 PF04480 Protein of unknown function (DUF559) SG48_RS06745 PF00005 ABC transporter SG48_RS06750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SG48_RS06750 PF00005 ABC transporter SG48_RS06755 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS06755 PF12911 N-terminal TM domain of oligopeptide transport permease C SG48_RS06760 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS06765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SG48_RS06775 PF10820 Protein of unknown function (DUF2543) SG48_RS06780 PF00324 Amino acid permease SG48_RS06785 PF00120 Glutamine synthetase, catalytic domain SG48_RS06790 PF07722 Peptidase C26 SG48_RS06795 PF07883 Cupin domain SG48_RS06795 PF01381 Helix-turn-helix SG48_RS06800 PF00171 Aldehyde dehydrogenase family SG48_RS06805 PF01266 FAD dependent oxidoreductase SG48_RS06810 PF00202 Aminotransferase class-III SG48_RS06815 PF02954 Bacterial regulatory protein, Fis family SG48_RS06815 PF00158 Sigma-54 interaction domain SG48_RS06820 PF04012 PspA/IM30 family SG48_RS06825 PF06667 Phage shock protein B SG48_RS06830 PF04024 PspC domain SG48_RS06835 PF09584 Phage shock protein PspD (Phageshock_PspD) SG48_RS06840 PF00581 Rhodanese-like domain SG48_RS06845 PF00128 Alpha amylase, catalytic domain SG48_RS06850 PF01547 Bacterial extracellular solute-binding protein SG48_RS06855 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS06860 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS06865 PF00107 Zinc-binding dehydrogenase SG48_RS06870 PF01261 Xylose isomerase-like TIM barrel SG48_RS06875 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SG48_RS06875 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SG48_RS06880 PF03632 Glycosyl hydrolase family 65 central catalytic domain SG48_RS06880 PF03636 Glycosyl hydrolase family 65, N-terminal domain SG48_RS06880 PF03633 Glycosyl hydrolase family 65, C-terminal domain SG48_RS06885 PF13419 Haloacid dehalogenase-like hydrolase SG48_RS06895 PF09381 Outer membrane protein G (OmpG) SG48_RS06900 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SG48_RS06900 PF00356 Bacterial regulatory proteins, lacI family SG48_RS06905 PF04317 YcjX-like family, DUF463 SG48_RS06910 PF05128 Domain of unknown function (DUF697) SG48_RS06915 PF18024 Helix-turn-helix domain SG48_RS06915 PF00158 Sigma-54 interaction domain SG48_RS06915 PF13188 PAS domain SG48_RS06920 PF08534 Redoxin SG48_RS06925 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SG48_RS06925 PF13378 Enolase C-terminal domain-like SG48_RS06930 PF00246 Zinc carboxypeptidase SG48_RS06940 PF12146 Serine aminopeptidase, S33 SG48_RS06945 PF03466 LysR substrate binding domain SG48_RS06945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS06955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SG48_RS06960 PF00924 Mechanosensitive ion channel SG48_RS06965 PF01609 Transposase DDE domain SG48_RS06965 PF05598 Transposase domain (DUF772) SG48_RS06970 PF10749 Protein of unknown function (DUF2534) SG48_RS06975 PF00582 Universal stress protein family SG48_RS06980 PF00325 Bacterial regulatory proteins, crp family SG48_RS06980 PF00027 Cyclic nucleotide-binding domain SG48_RS06985 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SG48_RS06985 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SG48_RS06990 PF03806 AbgT putative transporter family SG48_RS07000 PF01546 Peptidase family M20/M25/M40 SG48_RS07005 PF07687 Peptidase dimerisation domain SG48_RS07005 PF01546 Peptidase family M20/M25/M40 SG48_RS07010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS07010 PF03466 LysR substrate binding domain SG48_RS07020 PF01713 Smr domain SG48_RS07025 PF08448 PAS fold SG48_RS07025 PF00990 Diguanylate cyclase, GGDEF domain SG48_RS07030 PF01544 CorA-like Mg2+ transporter protein SG48_RS07040 PF00271 Helicase conserved C-terminal domain SG48_RS07040 PF03880 DbpA RNA binding domain SG48_RS07040 PF00270 DEAD/DEAH box helicase SG48_RS07045 PF01171 PP-loop family SG48_RS07050 PF12167 Arm DNA-binding domain SG48_RS07050 PF00589 Phage integrase family SG48_RS07055 PF06806 Putative excisionase (DUF1233) SG48_RS07060 PF06688 Protein of unknown function (DUF1187) SG48_RS07070 PF03837 RecT family SG48_RS07075 PF12684 PDDEXK-like domain of unknown function (DUF3799) SG48_RS07075 PF06630 Enterobacterial exodeoxyribonuclease VIII SG48_RS07085 PF04181 Rtr1/RPAP2 family SG48_RS07095 PF14163 Super-infection exclusion protein B SG48_RS07105 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT SG48_RS07110 PF06254 Putative bacterial toxin ydaT SG48_RS07115 PF07120 Protein of unknown function (DUF1376) SG48_RS07120 PF01695 IstB-like ATP binding protein SG48_RS07125 PF07789 Protein of unknown function (DUF1627) SG48_RS07130 PF03245 Bacteriophage Rz lysis protein SG48_RS07135 PF02386 Cation transport protein SG48_RS07140 PF02195 ParB-like nuclease domain SG48_RS07155 PF06791 Prophage tail length tape measure protein SG48_RS07160 PF06316 Enterobacterial Ail/Lom protein SG48_RS07165 PF01609 Transposase DDE domain SG48_RS07165 PF05598 Transposase domain (DUF772) SG48_RS07170 PF13505 Outer membrane protein beta-barrel domain SG48_RS07185 PF07484 Phage Tail Collar Domain SG48_RS07185 PF08400 Prophage tail fibre N-terminal SG48_RS07185 PF03335 Phage tail fibre repeat SG48_RS07190 PF02413 Caudovirales tail fibre assembly protein, lambda gpK SG48_RS07195 PF02796 Helix-turn-helix domain of resolvase SG48_RS07195 PF00239 Resolvase, N terminal domain SG48_RS07205 PF00582 Universal stress protein family SG48_RS07210 PF00267 Gram-negative porin SG48_RS07215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SG48_RS07215 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SG48_RS07215 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SG48_RS07215 PF10371 Domain of unknown function SG48_RS07215 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SG48_RS07220 PF03891 Domain of unknown function (DUF333) SG48_RS07225 PF03724 META domain SG48_RS07230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SG48_RS07230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SG48_RS07235 PF11739 Dicarboxylate transport SG48_RS07240 PF13617 YnbE-like lipoprotein SG48_RS07245 PF07027 Protein of unknown function (DUF1318) SG48_RS07250 PF14525 AraC-binding-like domain SG48_RS07250 PF12833 Helix-turn-helix domain SG48_RS07255 PF00171 Aldehyde dehydrogenase family SG48_RS07260 PF07833 Copper amine oxidase N-terminal domain SG48_RS07260 PF01179 Copper amine oxidase, enzyme domain SG48_RS07260 PF02727 Copper amine oxidase, N2 domain SG48_RS07260 PF02728 Copper amine oxidase, N3 domain SG48_RS07265 PF01575 MaoC like domain SG48_RS07265 PF00171 Aldehyde dehydrogenase family SG48_RS07270 PF05138 Phenylacetic acid catabolic protein SG48_RS07275 PF06243 Phenylacetic acid degradation B SG48_RS07280 PF05138 Phenylacetic acid catabolic protein SG48_RS07285 PF01883 Iron-sulfur cluster assembly protein SG48_RS07290 PF00175 Oxidoreductase NAD-binding domain SG48_RS07290 PF00970 Oxidoreductase FAD-binding domain SG48_RS07290 PF00111 2Fe-2S iron-sulfur cluster binding domain SG48_RS07295 PF00378 Enoyl-CoA hydratase/isomerase SG48_RS07300 PF00378 Enoyl-CoA hydratase/isomerase SG48_RS07305 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SG48_RS07305 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain SG48_RS07305 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SG48_RS07310 PF03061 Thioesterase superfamily SG48_RS07315 PF00108 Thiolase, N-terminal domain SG48_RS07315 PF02803 Thiolase, C-terminal domain SG48_RS07320 PF00501 AMP-binding enzyme SG48_RS07320 PF14535 AMP-binding enzyme C-terminal domain SG48_RS07325 PF08223 PaaX-like protein C-terminal domain SG48_RS07325 PF07848 PaaX-like protein SG48_RS07330 PF00132 Bacterial transferase hexapeptide (six repeats) SG48_RS07340 PF13276 HTH-like domain SG48_RS07340 PF00665 Integrase core domain SG48_RS07345 PF01527 Transposase SG48_RS07350 PF13936 Helix-turn-helix domain SG48_RS07350 PF00665 Integrase core domain SG48_RS07360 PF00248 Aldo/keto reductase family SG48_RS07365 PF10971 Protein of unknown function (DUF2773) SG48_RS07370 PF01066 CDP-alcohol phosphatidyltransferase SG48_RS07380 PF12146 Serine aminopeptidase, S33 SG48_RS07380 PF12147 Putative methyltransferase SG48_RS07385 PF00782 Dual specificity phosphatase, catalytic domain SG48_RS07390 PF02525 Flavodoxin-like fold SG48_RS07395 PF04408 Helicase associated domain (HA2) SG48_RS07395 PF11898 Domain of unknown function (DUF3418) SG48_RS07395 PF00271 Helicase conserved C-terminal domain SG48_RS07395 PF00270 DEAD/DEAH box helicase SG48_RS07395 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold SG48_RS07400 PF02698 DUF218 domain SG48_RS07405 PF00171 Aldehyde dehydrogenase family SG48_RS07410 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SG48_RS07410 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SG48_RS07415 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SG48_RS07415 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SG48_RS07420 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SG48_RS07420 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SG48_RS07425 PF01292 Prokaryotic cytochrome b561 SG48_RS07435 PF01848 Hok/gef family SG48_RS07440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SG48_RS07440 PF02203 Tar ligand binding domain homologue SG48_RS07440 PF00672 HAMP domain SG48_RS07445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS07445 PF03466 LysR substrate binding domain SG48_RS07450 PF07063 Domain of unknown function (DUF1338) SG48_RS07455 PF04349 Periplasmic glucan biosynthesis protein, MdoG SG48_RS07465 PF04325 Protein of unknown function (DUF465) SG48_RS07470 PF13302 Acetyltransferase (GNAT) domain SG48_RS07475 PF18836 Beta solenoid repeat from YDCK SG48_RS07480 PF03595 Voltage-dependent anion channel SG48_RS07485 PF03848 Tellurite resistance protein TehB SG48_RS07490 PF11769 Protein of unknown function (DUF3313) SG48_RS07500 PF01797 Transposase IS200 like SG48_RS07505 PF07282 Putative transposase DNA-binding domain SG48_RS07505 PF01385 Probable transposase SG48_RS07505 PF12323 Helix-turn-helix domain SG48_RS07510 PF03594 Benzoate membrane transport protein SG48_RS07515 PF07883 Cupin domain SG48_RS07515 PF01381 Helix-turn-helix SG48_RS07520 PF12392 Collagenase SG48_RS07520 PF01136 Peptidase family U32 SG48_RS07525 PF10829 Protein of unknown function (DUF2554) SG48_RS07530 PF07927 HicA toxin of bacterial toxin-antitoxin, SG48_RS07535 PF01381 Helix-turn-helix SG48_RS07535 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system SG48_RS07540 PF00155 Aminotransferase class I and II SG48_RS07540 PF00392 Bacterial regulatory proteins, gntR family SG48_RS07545 PF13416 Bacterial extracellular solute-binding protein SG48_RS07550 PF08402 TOBE domain SG48_RS07550 PF00005 ABC transporter SG48_RS07555 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS07560 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS07565 PF00171 Aldehyde dehydrogenase family SG48_RS07575 PF10753 Toxin GhoT_OrtT SG48_RS07580 PF10735 Protein of unknown function (DUF2526) SG48_RS07585 PF04657 Putative inner membrane exporter, YdcZ SG48_RS07590 PF00583 Acetyltransferase (GNAT) family SG48_RS07595 PF00107 Zinc-binding dehydrogenase SG48_RS07595 PF16884 N-terminal domain of oxidoreductase SG48_RS07600 PF00392 Bacterial regulatory proteins, gntR family SG48_RS07600 PF07729 FCD domain SG48_RS07605 PF00593 TonB dependent receptor SG48_RS07605 PF07715 TonB-dependent Receptor Plug Domain SG48_RS07615 PF00324 Amino acid permease SG48_RS07620 PF13417 Glutathione S-transferase, N-terminal domain SG48_RS07625 PF17520 Family of unknown function (DUF5445) SG48_RS07630 PF03527 RHS protein SG48_RS07640 PF13808 DDE_Tnp_1-associated SG48_RS07640 PF01609 Transposase DDE domain SG48_RS07645 PF13808 DDE_Tnp_1-associated SG48_RS07645 PF01609 Transposase DDE domain SG48_RS07650 PF01361 Tautomerase enzyme SG48_RS07655 PF01613 Flavin reductase like domain SG48_RS07660 PF00797 N-acetyltransferase SG48_RS07665 PF02567 Phenazine biosynthesis-like protein SG48_RS07670 PF02665 Nitrate reductase gamma subunit SG48_RS07675 PF02613 Nitrate reductase delta subunit SG48_RS07680 PF14711 Respiratory nitrate reductase beta C-terminal SG48_RS07680 PF13247 4Fe-4S dicluster domain SG48_RS07685 PF00384 Molybdopterin oxidoreductase SG48_RS07685 PF01568 Molydopterin dinucleotide binding domain SG48_RS07685 PF14710 Respiratory nitrate reductase alpha N-terminal SG48_RS07690 PF07690 Major Facilitator Superfamily SG48_RS07700 PF00267 Gram-negative porin SG48_RS07705 PF00892 EamA-like transporter family SG48_RS07710 PF00384 Molybdopterin oxidoreductase SG48_RS07710 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SG48_RS07710 PF01568 Molydopterin dinucleotide binding domain SG48_RS07715 PF00384 Molybdopterin oxidoreductase SG48_RS07715 PF01568 Molydopterin dinucleotide binding domain SG48_RS07715 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SG48_RS07720 PF13247 4Fe-4S dicluster domain SG48_RS07720 PF12800 4Fe-4S binding domain SG48_RS07720 PF09163 Formate dehydrogenase N, transmembrane SG48_RS07725 PF01292 Prokaryotic cytochrome b561 SG48_RS07730 PF01381 Helix-turn-helix SG48_RS07735 PF00107 Zinc-binding dehydrogenase SG48_RS07735 PF08240 Alcohol dehydrogenase GroES-like domain SG48_RS07740 PF00390 Malic enzyme, N-terminal domain SG48_RS07740 PF03949 Malic enzyme, NAD binding domain SG48_RS07745 PF08136 30S ribosomal protein subunit S22 family SG48_RS07750 PF10684 Putative biofilm-dependent modulation protein SG48_RS07755 PF02566 OsmC-like protein SG48_RS07760 PF00005 ABC transporter SG48_RS07760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SG48_RS07765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SG48_RS07765 PF00005 ABC transporter SG48_RS07770 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS07770 PF12911 N-terminal TM domain of oligopeptide transport permease C SG48_RS07775 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS07780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SG48_RS07785 PF01427 D-ala-D-ala dipeptidase SG48_RS07790 PF00563 EAL domain SG48_RS07790 PF13426 PAS domain SG48_RS07790 PF00990 Diguanylate cyclase, GGDEF domain SG48_RS07795 PF00990 Diguanylate cyclase, GGDEF domain SG48_RS07800 PF02638 Glycosyl hydrolase-like 10 SG48_RS07805 PF13520 Amino acid permease SG48_RS07810 PF00282 Pyridoxal-dependent decarboxylase conserved domain SG48_RS07820 PF05193 Peptidase M16 inactive domain SG48_RS07820 PF00675 Insulinase (Peptidase family M16) SG48_RS07825 PF07715 TonB-dependent Receptor Plug Domain SG48_RS07830 PF00005 ABC transporter SG48_RS07830 PF06472 ABC transporter transmembrane region 2 SG48_RS07835 PF13186 Iron-sulfur cluster-binding domain SG48_RS07835 PF04055 Radical SAM superfamily SG48_RS07840 PF00884 Sulfatase SG48_RS07845 PF12833 Helix-turn-helix domain SG48_RS07850 PF17073 Two-component-system connector protein SG48_RS07855 PF00384 Molybdopterin oxidoreductase SG48_RS07860 PF09160 FimH, mannose binding SG48_RS07865 PF00419 Fimbrial protein SG48_RS07870 PF00419 Fimbrial protein SG48_RS07875 PF13953 PapC C-terminal domain SG48_RS07875 PF00577 Outer membrane usher protein SG48_RS07885 PF07804 HipA-like C-terminal domain SG48_RS07885 PF13657 HipA N-terminal domain SG48_RS07890 PF01381 Helix-turn-helix SG48_RS07895 PF03797 Autotransporter beta-domain SG48_RS07900 PF13018 Extended Signal Peptide of Type V secretion system SG48_RS07905 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SG48_RS07905 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SG48_RS07910 PF04198 Putative sugar-binding domain SG48_RS07915 PF00005 ABC transporter SG48_RS07920 PF02653 Branched-chain amino acid transport system / permease component SG48_RS07925 PF02653 Branched-chain amino acid transport system / permease component SG48_RS07930 PF13407 Periplasmic binding protein domain SG48_RS07935 PF01791 DeoC/LacD family aldolase SG48_RS07940 PF03992 Antibiotic biosynthesis monooxygenase SG48_RS07945 PF13649 Methyltransferase domain SG48_RS07950 PF01062 Bestrophin, RFP-TM, chloride channel SG48_RS07960 PF08125 Mannitol dehydrogenase C-terminal domain SG48_RS07960 PF01232 Mannitol dehydrogenase Rossmann domain SG48_RS07965 PF00990 Diguanylate cyclase, GGDEF domain SG48_RS07970 PF13811 Domain of unknown function (DUF4186) SG48_RS07975 PF04960 Glutaminase SG48_RS07980 PF00171 Aldehyde dehydrogenase family SG48_RS07985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS07985 PF03466 LysR substrate binding domain SG48_RS07995 PF07690 Major Facilitator Superfamily SG48_RS08000 PF01914 MarC family integral membrane protein SG48_RS08005 PF01047 MarR family SG48_RS08010 PF12833 Helix-turn-helix domain SG48_RS08015 PF13999 MarB protein SG48_RS08020 PF00892 EamA-like transporter family SG48_RS08025 PF07690 Major Facilitator Superfamily SG48_RS08035 PF00990 Diguanylate cyclase, GGDEF domain SG48_RS08040 PF04076 Bacterial OB fold (BOF) protein SG48_RS08045 PF02464 Competence-damaged protein SG48_RS08050 PF01432 Peptidase family M3 SG48_RS08055 PF00106 short chain dehydrogenase SG48_RS08060 PF00392 Bacterial regulatory proteins, gntR family SG48_RS08060 PF07729 FCD domain SG48_RS08065 PF14001 YdfZ protein SG48_RS08070 PF01232 Mannitol dehydrogenase Rossmann domain SG48_RS08070 PF08125 Mannitol dehydrogenase C-terminal domain SG48_RS08075 PF00083 Sugar (and other) transporter SG48_RS08075 PF07690 Major Facilitator Superfamily SG48_RS08085 PF00239 Resolvase, N terminal domain SG48_RS08085 PF02796 Helix-turn-helix domain of resolvase SG48_RS08090 PF02413 Caudovirales tail fibre assembly protein, lambda gpK SG48_RS08095 PF03335 Phage tail fibre repeat SG48_RS08095 PF07484 Phage Tail Collar Domain SG48_RS08100 PF07471 Phage DNA packaging protein Nu1 SG48_RS08105 PF13132 Domain of unknown function (DUF3950) SG48_RS08110 PF07166 Protein of unknown function (DUF1398) SG48_RS08115 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system SG48_RS08125 PF00313 'Cold-shock' DNA-binding domain SG48_RS08130 PF10721 Protein of unknown function (DUF2514) SG48_RS08135 PF00959 Phage lysozyme SG48_RS08140 PF07041 Protein of unknown function (DUF1327) SG48_RS08145 PF04971 Bacteriophage P21 holin S SG48_RS08150 PF00313 'Cold-shock' DNA-binding domain SG48_RS08155 PF00313 'Cold-shock' DNA-binding domain SG48_RS08160 PF03589 Antitermination protein SG48_RS08165 PF06147 Protein of unknown function (DUF968) SG48_RS08180 PF01848 Hok/gef family SG48_RS08185 PF05016 ParE toxin of type II toxin-antitoxin system, parDE SG48_RS08190 PF04221 RelB antitoxin SG48_RS08195 PF14282 FlxA-like protein SG48_RS08210 PF01381 Helix-turn-helix SG48_RS08215 PF07151 Protein of unknown function (DUF1391) SG48_RS08230 PF05358 DicB protein SG48_RS08235 PF07358 Protein of unknown function (DUF1482) SG48_RS08250 PF12167 Arm DNA-binding domain SG48_RS08250 PF00589 Phage integrase family SG48_RS08255 PF08240 Alcohol dehydrogenase GroES-like domain SG48_RS08255 PF00107 Zinc-binding dehydrogenase SG48_RS08260 PF13378 Enolase C-terminal domain-like SG48_RS08260 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SG48_RS08265 PF02694 Uncharacterised BCR, YnfA/UPF0060 family SG48_RS08270 PF06932 Protein of unknown function (DUF1283) SG48_RS08275 PF13302 Acetyltransferase (GNAT) domain SG48_RS08280 PF06788 Uncharacterised protein family (UPF0257) SG48_RS08285 PF06649 Protein of unknown function (DUF1161) SG48_RS08290 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SG48_RS08290 PF01568 Molydopterin dinucleotide binding domain SG48_RS08290 PF00384 Molybdopterin oxidoreductase SG48_RS08295 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SG48_RS08295 PF00384 Molybdopterin oxidoreductase SG48_RS08295 PF01568 Molydopterin dinucleotide binding domain SG48_RS08300 PF12800 4Fe-4S binding domain SG48_RS08300 PF13247 4Fe-4S dicluster domain SG48_RS08305 PF04976 DMSO reductase anchor subunit (DmsC) SG48_RS08310 PF02613 Nitrate reductase delta subunit SG48_RS08315 PF00654 Voltage gated chloride channel SG48_RS08325 PF00480 ROK family SG48_RS08330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS08330 PF03466 LysR substrate binding domain SG48_RS08335 PF07690 Major Facilitator Superfamily SG48_RS08350 PF00089 Trypsin SG48_RS08355 PF00893 Small Multidrug Resistance protein SG48_RS08360 PF00893 Small Multidrug Resistance protein SG48_RS08365 PF01594 AI-2E family transporter SG48_RS08370 PF02233 NAD(P) transhydrogenase beta subunit SG48_RS08375 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SG48_RS08375 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SG48_RS08375 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch SG48_RS08380 PF07338 Protein of unknown function (DUF1471) SG48_RS08385 PF13520 Amino acid permease SG48_RS08395 PF06942 GlpM protein SG48_RS08400 PF00072 Response regulator receiver domain SG48_RS08400 PF00486 Transcriptional regulatory protein, C terminal SG48_RS08405 PF00512 His Kinase A (phospho-acceptor) domain SG48_RS08405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS08405 PF00672 HAMP domain SG48_RS08410 PF05472 DNA replication terminus site-binding protein (Ter protein) SG48_RS08415 PF00206 Lyase SG48_RS08415 PF10415 Fumarase C C-terminus SG48_RS08420 PF05683 Fumarase C-terminus SG48_RS08420 PF05681 Fumarate hydratase (Fumerase) SG48_RS08425 PF01238 Phosphomannose isomerase type I SG48_RS08430 PF06097 Bacterial protein of unknown function (DUF945) SG48_RS08435 PF03573 outer membrane porin, OprD family SG48_RS08445 PF00703 Glycosyl hydrolases family 2 SG48_RS08445 PF02837 Glycosyl hydrolases family 2, sugar binding domain SG48_RS08445 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SG48_RS08450 PF00440 Bacterial regulatory proteins, tetR family SG48_RS08460 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SG48_RS08460 PF00356 Bacterial regulatory proteins, lacI family SG48_RS08465 PF02378 Phosphotransferase system, EIIC SG48_RS08465 PF00367 phosphotransferase system, EIIB SG48_RS08470 PF00155 Aminotransferase class I and II SG48_RS08475 PF00962 Adenosine/AMP deaminase SG48_RS08480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SG48_RS08480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SG48_RS08490 PF05321 Haemolysin expression modulating protein SG48_RS08495 PF10754 Protein of unknown function (DUF2569) SG48_RS08500 PF02508 Rnf-Nqr subunit, membrane protein SG48_RS08505 PF04060 Putative Fe-S cluster SG48_RS08510 PF10531 SLBB domain SG48_RS08510 PF13375 RnfC Barrel sandwich hybrid domain SG48_RS08510 PF12838 4Fe-4S dicluster domain SG48_RS08510 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SG48_RS08515 PF03116 NQR2, RnfD, RnfE family SG48_RS08520 PF04205 FMN-binding domain SG48_RS08525 PF02508 Rnf-Nqr subunit, membrane protein SG48_RS08530 PF00633 Helix-hairpin-helix motif SG48_RS08530 PF10576 Iron-sulfur binding domain of endonuclease III SG48_RS08530 PF00730 HhH-GPD superfamily base excision DNA repair protein SG48_RS08540 PF00854 POT family SG48_RS08545 PF02798 Glutathione S-transferase, N-terminal domain SG48_RS08545 PF00043 Glutathione S-transferase, C-terminal domain SG48_RS08550 PF08543 Phosphomethylpyrimidine kinase SG48_RS08555 PF01479 S4 domain SG48_RS08555 PF00579 tRNA synthetases class I (W and Y) SG48_RS08560 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region SG48_RS08560 PF01243 Pyridoxamine 5'-phosphate oxidase SG48_RS08565 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme SG48_RS08570 PF03702 Anhydro-N-acetylmuramic acid kinase SG48_RS08575 PF05433 Glycine zipper 2TM domain SG48_RS08580 PF01047 MarR family SG48_RS08585 PF07869 Protein of unknown function (DUF1656) SG48_RS08590 PF00529 HlyD membrane-fusion protein of T1SS SG48_RS08590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SG48_RS08595 PF04632 Fusaric acid resistance protein family SG48_RS08600 PF00080 Copper/zinc superoxide dismutase (SODC) SG48_RS08605 PF00248 Aldo/keto reductase family SG48_RS08610 PF06945 Protein of unknown function (DUF1289) SG48_RS08615 PF16925 Tetracyclin repressor-like, C-terminal domain SG48_RS08615 PF00440 Bacterial regulatory proteins, tetR family SG48_RS08620 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SG48_RS08625 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SG48_RS08630 PF00929 Exonuclease SG48_RS08635 PF00270 DEAD/DEAH box helicase SG48_RS08635 PF08494 DEAD/H associated SG48_RS08635 PF00271 Helicase conserved C-terminal domain SG48_RS08640 PF00462 Glutaredoxin SG48_RS08645 PF00877 NlpC/P60 family SG48_RS08650 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SG48_RS08650 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SG48_RS08655 PF07690 Major Facilitator Superfamily SG48_RS08665 PF00356 Bacterial regulatory proteins, lacI family SG48_RS08670 PF03466 LysR substrate binding domain SG48_RS08670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS08675 PF07690 Major Facilitator Superfamily SG48_RS08685 PF00677 Lumazine binding domain SG48_RS08690 PF01554 MatE SG48_RS08695 PF03212 Pertactin SG48_RS08695 PF16168 Adhesin of bacterial autotransporter system, probable stalk SG48_RS08710 PF08803 Putative mono-oxygenase ydhR SG48_RS08715 PF13454 FAD-NAD(P)-binding SG48_RS08725 PF01292 Prokaryotic cytochrome b561 SG48_RS08730 PF13247 4Fe-4S dicluster domain SG48_RS08740 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 SG48_RS08740 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain SG48_RS08745 PF12800 4Fe-4S binding domain SG48_RS08745 PF13247 4Fe-4S dicluster domain SG48_RS08750 PF10965 Protein of unknown function (DUF2767) SG48_RS08755 PF00224 Pyruvate kinase, barrel domain SG48_RS08755 PF02887 Pyruvate kinase, alpha/beta domain SG48_RS08760 PF04728 Lipoprotein leucine-zipper SG48_RS08765 PF01476 LysM domain SG48_RS08765 PF03734 L,D-transpeptidase catalytic domain SG48_RS08765 PF17969 L,D-transpeptidase C-terminal domain SG48_RS08770 PF02657 Fe-S metabolism associated domain SG48_RS08775 PF00266 Aminotransferase class-V SG48_RS08780 PF01458 Uncharacterized protein family (UPF0051) SG48_RS08785 PF00005 ABC transporter SG48_RS08790 PF01458 Uncharacterized protein family (UPF0051) SG48_RS08795 PF01521 Iron-sulphur cluster biosynthesis SG48_RS08800 PF15930 Domain of unknown function SG48_RS08805 PF03061 Thioesterase superfamily SG48_RS08810 PF13183 4Fe-4S dicluster domain SG48_RS08810 PF01565 FAD binding domain SG48_RS08810 PF02913 FAD linked oxidases, C-terminal domain SG48_RS08815 PF01594 AI-2E family transporter SG48_RS08820 PF08965 Domain of unknown function (DUF1870) SG48_RS08825 PF07690 Major Facilitator Superfamily SG48_RS08830 PF07690 Major Facilitator Superfamily SG48_RS08835 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SG48_RS08835 PF08501 Shikimate dehydrogenase substrate binding domain SG48_RS08840 PF01487 Type I 3-dehydroquinase SG48_RS08845 PF01144 Coenzyme A transferase SG48_RS08850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SG48_RS08850 PF02770 Acyl-CoA dehydrogenase, middle domain SG48_RS08850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SG48_RS08855 PF12833 Helix-turn-helix domain SG48_RS08855 PF02311 AraC-like ligand binding domain SG48_RS08865 PF01012 Electron transfer flavoprotein domain SG48_RS08870 PF00766 Electron transfer flavoprotein FAD-binding domain SG48_RS08870 PF01012 Electron transfer flavoprotein domain SG48_RS08875 PF01494 FAD binding domain SG48_RS08885 PF13193 AMP-binding enzyme C-terminal domain SG48_RS08885 PF00501 AMP-binding enzyme SG48_RS08890 PF00391 PEP-utilising enzyme, mobile domain SG48_RS08890 PF02896 PEP-utilising enzyme, TIM barrel domain SG48_RS08890 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SG48_RS08900 PF03618 Kinase/pyrophosphorylase SG48_RS08905 PF00793 DAHP synthetase I family SG48_RS08910 PF10636 Hemin uptake protein hemP SG48_RS08915 PF02696 Uncharacterized ACR, YdiU/UPF0061 family SG48_RS08920 PF00563 EAL domain SG48_RS08925 PF00877 NlpC/P60 family SG48_RS08930 PF00005 ABC transporter SG48_RS08935 PF00255 Glutathione peroxidase SG48_RS08940 PF01032 FecCD transport family SG48_RS08945 PF00216 Bacterial DNA-binding protein SG48_RS08950 PF03483 B3/4 domain SG48_RS08950 PF03484 tRNA synthetase B5 domain SG48_RS08950 PF03147 Ferredoxin-fold anticodon binding domain SG48_RS08950 PF01588 Putative tRNA binding domain SG48_RS08950 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SG48_RS08955 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SG48_RS08955 PF01409 tRNA synthetases class II core domain (F) SG48_RS08965 PF00453 Ribosomal protein L20 SG48_RS08970 PF01632 Ribosomal protein L35 SG48_RS08975 PF05198 Translation initiation factor IF-3, N-terminal domain SG48_RS08975 PF00707 Translation initiation factor IF-3, C-terminal domain SG48_RS08980 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SG48_RS08980 PF02824 TGS domain SG48_RS08980 PF03129 Anticodon binding domain SG48_RS08980 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SG48_RS08995 PF04338 Protein of unknown function, DUF481 SG48_RS09000 PF00294 pfkB family carbohydrate kinase SG48_RS09005 PF11080 Endoribonuclease GhoS SG48_RS09010 PF03881 Fructosamine kinase SG48_RS09015 PF14002 YniB-like protein SG48_RS09020 PF13419 Haloacid dehalogenase-like hydrolase SG48_RS09025 PF04307 LexA-binding, inner membrane-associated putative hydrolase SG48_RS09030 PF00375 Sodium:dicarboxylate symporter family SG48_RS09040 PF10729 Cell division activator CedA SG48_RS09045 PF00199 Catalase SG48_RS09045 PF18011 C-terminal domain found in long catalases SG48_RS09045 PF06628 Catalase-related immune-responsive SG48_RS09050 PF04794 YdjC-like protein SG48_RS09055 PF02056 Family 4 glycosyl hydrolase SG48_RS09055 PF11975 Family 4 glycosyl hydrolase C-terminal domain SG48_RS09060 PF12833 Helix-turn-helix domain SG48_RS09060 PF07883 Cupin domain SG48_RS09065 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SG48_RS09070 PF02378 Phosphotransferase system, EIIC SG48_RS09075 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SG48_RS09080 PF04355 SmpA / OmlA family SG48_RS09085 PF02540 NAD synthase SG48_RS09100 PF05962 HutD SG48_RS09105 PF07813 LTXXQ motif family protein SG48_RS09110 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family SG48_RS09115 PF04996 Succinylarginine dihydrolase SG48_RS09120 PF00171 Aldehyde dehydrogenase family SG48_RS09125 PF04958 Arginine N-succinyltransferase beta subunit SG48_RS09130 PF00202 Aminotransferase class-III SG48_RS09135 PF03372 Endonuclease/Exonuclease/phosphatase family SG48_RS09140 PF09335 SNARE associated Golgi protein SG48_RS09150 PF09335 SNARE associated Golgi protein SG48_RS09155 PF02627 Carboxymuconolactone decarboxylase family SG48_RS09160 PF13416 Bacterial extracellular solute-binding protein SG48_RS09165 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS09170 PF00005 ABC transporter SG48_RS09175 PF00581 Rhodanese-like domain SG48_RS09180 PF01066 CDP-alcohol phosphatidyltransferase SG48_RS09185 PF00293 NUDIX domain SG48_RS09190 PF07383 Protein of unknown function (DUF1496) SG48_RS09195 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SG48_RS09195 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SG48_RS09200 PF06889 Protein of unknown function (DUF1266) SG48_RS09205 PF01131 DNA topoisomerase SG48_RS09205 PF01751 Toprim domain SG48_RS09210 PF02769 AIR synthase related protein, C-terminal domain SG48_RS09210 PF00586 AIR synthase related protein, N-terminal domain SG48_RS09220 PF00881 Nitroreductase family SG48_RS09230 PF01343 Peptidase family S49 SG48_RS09235 PF00710 Asparaginase, N-terminal SG48_RS09235 PF17763 Glutaminase/Asparaginase C-terminal domain SG48_RS09240 PF00857 Isochorismatase family SG48_RS09245 PF00083 Sugar (and other) transporter SG48_RS09250 PF08220 DeoR-like helix-turn-helix domain SG48_RS09250 PF00455 DeoR C terminal sensor domain SG48_RS09255 PF00248 Aldo/keto reductase family SG48_RS09260 PF00294 pfkB family carbohydrate kinase SG48_RS09265 PF01116 Fructose-bisphosphate aldolase class-II SG48_RS09270 PF00107 Zinc-binding dehydrogenase SG48_RS09270 PF08240 Alcohol dehydrogenase GroES-like domain SG48_RS09275 PF00083 Sugar (and other) transporter SG48_RS09280 PF08240 Alcohol dehydrogenase GroES-like domain SG48_RS09280 PF00107 Zinc-binding dehydrogenase SG48_RS09285 PF07023 Protein of unknown function (DUF1315) SG48_RS09290 PF01641 SelR domain SG48_RS09295 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SG48_RS09295 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SG48_RS09300 PF01263 Aldose 1-epimerase SG48_RS09305 PF00248 Aldo/keto reductase family SG48_RS09310 PF06629 MltA-interacting protein MipA SG48_RS09315 PF08298 PrkA AAA domain SG48_RS09315 PF06798 PrkA serine protein kinase C-terminal domain SG48_RS09320 PF04285 Protein of unknown function (DUF444) SG48_RS09325 PF00990 Diguanylate cyclase, GGDEF domain SG48_RS09325 PF17158 Membrane-associated sensor, integral membrane domain SG48_RS09330 PF17155 Gammaproteobacterial periplasmic sensor domain SG48_RS09330 PF00990 Diguanylate cyclase, GGDEF domain SG48_RS09335 PF04073 Aminoacyl-tRNA editing domain SG48_RS09345 PF04284 Protein of unknown function (DUF441) SG48_RS09350 PF12833 Helix-turn-helix domain SG48_RS09350 PF02311 AraC-like ligand binding domain SG48_RS09355 PF07690 Major Facilitator Superfamily SG48_RS09360 PF04343 Protein of unknown function, DUF488 SG48_RS09365 PF03891 Domain of unknown function (DUF333) SG48_RS09370 PF00990 Diguanylate cyclase, GGDEF domain SG48_RS09370 PF13185 GAF domain SG48_RS09380 PF04226 Transglycosylase associated protein SG48_RS09385 PF08956 Domain of unknown function (DUF1869) SG48_RS09390 PF09313 Domain of unknown function (DUF1971) SG48_RS09395 PF01810 LysE type translocator SG48_RS09400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS09400 PF03466 LysR substrate binding domain SG48_RS09405 PF00180 Isocitrate/isopropylmalate dehydrogenase SG48_RS09410 PF02028 BCCT, betaine/carnitine/choline family transporter SG48_RS09415 PF00355 Rieske [2Fe-2S] domain SG48_RS09415 PF00848 Ring hydroxylating alpha subunit (catalytic domain) SG48_RS09420 PF00970 Oxidoreductase FAD-binding domain SG48_RS09420 PF00111 2Fe-2S iron-sulfur cluster binding domain SG48_RS09420 PF00175 Oxidoreductase NAD-binding domain SG48_RS09425 PF01612 3'-5' exonuclease SG48_RS09425 PF00570 HRDC domain SG48_RS09430 PF13193 AMP-binding enzyme C-terminal domain SG48_RS09430 PF00501 AMP-binding enzyme SG48_RS09435 PF03843 Outer membrane lipoprotein Slp family SG48_RS09440 PF00814 Glycoprotease family SG48_RS09445 PF13307 Helicase C-terminal domain SG48_RS09445 PF04851 Type III restriction enzyme, res subunit SG48_RS09450 PF01042 Endoribonuclease L-PSP SG48_RS09455 PF08986 Domain of unknown function (DUF1889) SG48_RS09460 PF03701 Uncharacterised protein family (UPF0181) SG48_RS09465 PF00425 chorismate binding enzyme SG48_RS09465 PF04715 Anthranilate synthase component I, N terminal region SG48_RS09470 PF00293 NUDIX domain SG48_RS09475 PF03313 Serine dehydratase alpha chain SG48_RS09475 PF03315 Serine dehydratase beta chain SG48_RS09480 PF12792 CSS motif domain associated with EAL SG48_RS09480 PF00563 EAL domain SG48_RS09485 PF03741 Integral membrane protein TerC family SG48_RS09485 PF03471 Transporter associated domain SG48_RS09495 PF03830 PTS system sorbose subfamily IIB component SG48_RS09495 PF03610 PTS system fructose IIA component SG48_RS09500 PF03609 PTS system sorbose-specific iic component SG48_RS09505 PF03613 PTS system mannose/fructose/sorbose family IID component SG48_RS09510 PF06173 Protein of unknown function (DUF986) SG48_RS09520 PF02659 Putative manganese efflux pump SG48_RS09525 PF13847 Methyltransferase domain SG48_RS09530 PF00313 'Cold-shock' DNA-binding domain SG48_RS09535 PF10736 Protein of unknown function (DUF2627) SG48_RS09545 PF13974 YebO-like protein SG48_RS09550 PF13998 MgrB protein SG48_RS09555 PF13996 YobH-like protein SG48_RS09560 PF01614 Bacterial transcriptional regulator SG48_RS09560 PF09339 IclR helix-turn-helix domain SG48_RS09565 PF07690 Major Facilitator Superfamily SG48_RS09570 PF01435 Peptidase family M48 SG48_RS09575 PF00595 PDZ domain SG48_RS09575 PF03572 Peptidase family S41 SG48_RS09575 PF11818 C-terminal domain of tail specific protease (DUF3340) SG48_RS09575 PF17804 Tail specific protease N-terminal domain SG48_RS09580 PF04352 ProQ/FINO family SG48_RS09580 PF17516 ProQ C-terminal domain SG48_RS09585 PF13185 GAF domain SG48_RS09590 PF04403 Paraquat-inducible protein A SG48_RS09595 PF02470 MlaD protein SG48_RS09600 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF SG48_RS09600 PF01189 16S rRNA methyltransferase RsmB/F SG48_RS09600 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF SG48_RS09605 PF07351 Protein of unknown function (DUF1480) SG48_RS09610 PF07358 Protein of unknown function (DUF1482) SG48_RS09615 PF00149 Calcineurin-like phosphoesterase SG48_RS09625 PF10709 Protein of unknown function (DUF2511) SG48_RS09630 PF05425 Copper resistance protein D SG48_RS09635 PF04234 CopC domain SG48_RS09640 PF06440 DNA polymerase III, theta subunit SG48_RS09645 PF00795 Carbon-nitrogen hydrolase SG48_RS09650 PF00929 Exonuclease SG48_RS09655 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain SG48_RS09655 PF00326 Prolyl oligopeptidase family SG48_RS09660 PF04391 Protein of unknown function (DUF533) SG48_RS09670 PF13995 YebF-like protein SG48_RS09675 PF07130 YebG protein SG48_RS09680 PF02222 ATP-grasp domain SG48_RS09685 PF01081 KDPG and KHG aldolase SG48_RS09690 PF00920 Dehydratase family SG48_RS09695 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SG48_RS09695 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SG48_RS09705 PF01380 SIS domain SG48_RS09705 PF01418 Helix-turn-helix domain, rpiR family SG48_RS09710 PF00224 Pyruvate kinase, barrel domain SG48_RS09710 PF02887 Pyruvate kinase, alpha/beta domain SG48_RS09715 PF03279 Bacterial lipid A biosynthesis acyltransferase SG48_RS09720 PF01551 Peptidase family M23 SG48_RS09720 PF08525 Opacity-associated protein A N-terminal motif SG48_RS09720 PF01476 LysM domain SG48_RS09725 PF01297 Zinc-uptake complex component A periplasmic SG48_RS09730 PF00005 ABC transporter SG48_RS09735 PF00950 ABC 3 transport family SG48_RS09740 PF05491 RuvB C-terminal winged helix domain SG48_RS09740 PF05496 Holliday junction DNA helicase RuvB P-loop domain SG48_RS09740 PF17864 RuvB AAA lid domain SG48_RS09745 PF01330 RuvA N terminal domain SG48_RS09745 PF07499 RuvA, C-terminal domain SG48_RS09750 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family SG48_RS09755 PF02075 Crossover junction endodeoxyribonuclease RuvC SG48_RS09760 PF01709 Transcriptional regulator SG48_RS09765 PF00293 NUDIX domain SG48_RS09770 PF01336 OB-fold nucleic acid binding domain SG48_RS09770 PF00152 tRNA synthetases class II (D, K and N) SG48_RS09770 PF02938 GAD domain SG48_RS09775 PF00857 Isochorismatase family SG48_RS09780 PF01904 Protein of unknown function DUF72 SG48_RS09785 PF01124 MAPEG family SG48_RS09790 PF13649 Methyltransferase domain SG48_RS09795 PF08003 Protein of unknown function (DUF1698) SG48_RS09800 PF00384 Molybdopterin oxidoreductase SG48_RS09800 PF01568 Molydopterin dinucleotide binding domain SG48_RS09800 PF18364 Molybdopterin oxidoreductase N-terminal domain SG48_RS09805 PF03264 NapC/NirT cytochrome c family, N-terminal region SG48_RS09810 PF03932 CutC family SG48_RS09815 PF06185 YecM protein SG48_RS09820 PF03485 Arginyl tRNA synthetase N terminal domain SG48_RS09820 PF05746 DALR anticodon binding domain SG48_RS09820 PF00750 tRNA synthetases class I (R) SG48_RS09825 PF07007 Lysozyme inhibitor LprI SG48_RS09830 PF06366 Flagellar protein FlhE SG48_RS09835 PF00771 FHIPEP family SG48_RS09840 PF01312 FlhB HrpN YscU SpaS Family SG48_RS09845 PF04344 Chemotaxis phosphatase, CheZ SG48_RS09850 PF00072 Response regulator receiver domain SG48_RS09855 PF01339 CheB methylesterase SG48_RS09855 PF00072 Response regulator receiver domain SG48_RS09860 PF01739 CheR methyltransferase, SAM binding domain SG48_RS09860 PF03705 CheR methyltransferase, all-alpha domain SG48_RS09865 PF00672 HAMP domain SG48_RS09865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SG48_RS09865 PF02203 Tar ligand binding domain homologue SG48_RS09870 PF02203 Tar ligand binding domain homologue SG48_RS09870 PF00672 HAMP domain SG48_RS09870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SG48_RS09875 PF01584 CheW-like domain SG48_RS09880 PF09078 CheY binding SG48_RS09880 PF01627 Hpt domain SG48_RS09880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS09880 PF02895 Signal transducing histidine kinase, homodimeric domain SG48_RS09880 PF01584 CheW-like domain SG48_RS09885 PF00691 OmpA family SG48_RS09885 PF13677 Membrane MotB of proton-channel complex MotA/MotB SG48_RS09890 PF01618 MotA/TolQ/ExbB proton channel family SG48_RS09895 PF05280 Flagellar transcriptional activator (FlhC) SG48_RS09900 PF05247 Flagellar transcriptional activator (FlhD) SG48_RS09905 PF00582 Universal stress protein family SG48_RS09910 PF00982 Glycosyltransferase family 20 SG48_RS09915 PF02358 Trehalose-phosphatase SG48_RS09920 PF02653 Branched-chain amino acid transport system / permease component SG48_RS09925 PF00005 ABC transporter SG48_RS09930 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SG48_RS09935 PF00210 Ferritin-like domain SG48_RS09940 PF10964 Protein of unknown function (DUF2766) SG48_RS09950 PF13992 YecR-like lipoprotein SG48_RS09955 PF00210 Ferritin-like domain SG48_RS09960 PF10678 Protein of unknown function (DUF2492) SG48_RS09965 PF03222 Tryptophan/tyrosine permease family SG48_RS09970 PF03695 Uncharacterised protein family (UPF0149) SG48_RS09970 PF02810 SEC-C motif SG48_RS09990 PF01066 CDP-alcohol phosphatidyltransferase SG48_RS09995 PF08459 UvrC Helix-hairpin-helix N-terminal SG48_RS09995 PF02151 UvrB/uvrC motif SG48_RS09995 PF01541 GIY-YIG catalytic domain SG48_RS10000 PF00072 Response regulator receiver domain SG48_RS10000 PF00196 Bacterial regulatory proteins, luxR family SG48_RS10010 PF10769 Protein of unknown function (DUF2594) SG48_RS10015 PF03472 Autoinducer binding domain SG48_RS10015 PF00196 Bacterial regulatory proteins, luxR family SG48_RS10020 PF00005 ABC transporter SG48_RS10025 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS10030 PF00291 Pyridoxal-phosphate dependent enzyme SG48_RS10035 PF00497 Bacterial extracellular solute-binding proteins, family 3 SG48_RS10040 PF02899 Phage integrase, N-terminal SAM-like domain SG48_RS10045 PF04542 Sigma-70 region 2 SG48_RS10045 PF04545 Sigma-70, region 4 SG48_RS10045 PF04539 Sigma-70 region 3 SG48_RS10050 PF00700 Bacterial flagellin C-terminal helical region SG48_RS10050 PF08884 Flagellin D3 domain SG48_RS10050 PF00669 Bacterial flagellin N-terminal helical region SG48_RS10055 PF02465 Flagellar hook-associated protein 2 N-terminus SG48_RS10055 PF07195 Flagellar hook-associated protein 2 C-terminus SG48_RS10060 PF02561 Flagellar protein FliS SG48_RS10065 PF05400 Flagellar protein FliT SG48_RS10070 PF02806 Alpha amylase, C-terminal all-beta domain SG48_RS10070 PF00128 Alpha amylase, catalytic domain SG48_RS10075 PF13987 YedD-like protein SG48_RS10080 PF04143 Sulphur transport SG48_RS10085 PF01206 Sulfurtransferase TusA SG48_RS10090 PF02586 SOS response associated peptidase (SRAP) SG48_RS10095 PF00583 Acetyltransferase (GNAT) family SG48_RS10115 PF02049 Flagellar hook-basal body complex protein FliE SG48_RS10120 PF08345 Flagellar M-ring protein C-terminal SG48_RS10120 PF01514 Secretory protein of YscJ/FliF family SG48_RS10125 PF01706 FliG C-terminal domain SG48_RS10125 PF14841 FliG middle domain SG48_RS10125 PF14842 FliG N-terminal domain SG48_RS10130 PF02108 Flagellar assembly protein FliH SG48_RS10135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SG48_RS10135 PF18269 T3SS EscN ATPase C-terminal domain SG48_RS10140 PF02050 Flagellar FliJ protein SG48_RS10145 PF02120 Flagellar hook-length control protein FliK SG48_RS10150 PF03748 Flagellar basal body-associated protein FliL SG48_RS10155 PF02154 Flagellar motor switch protein FliM SG48_RS10155 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SG48_RS10160 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term SG48_RS10160 PF16973 Flagellar motor switch protein FliN N-terminal SG48_RS10165 PF04347 Flagellar biosynthesis protein, FliO SG48_RS10170 PF00813 FliP family SG48_RS10175 PF01313 Bacterial export proteins, family 3 SG48_RS10180 PF01311 Bacterial export proteins, family 1 SG48_RS10185 PF00196 Bacterial regulatory proteins, luxR family SG48_RS10190 PF10781 Dextransucrase DSRB SG48_RS10195 PF10733 Protein of unknown function (DUF2525) SG48_RS10205 PF17151 Periplasmic sensor domain SG48_RS10205 PF00990 Diguanylate cyclase, GGDEF domain SG48_RS10210 PF09926 Uncharacterized small protein (DUF2158) SG48_RS10215 PF05661 Protein of unknown function (DUF808) SG48_RS10220 PF00892 EamA-like transporter family SG48_RS10225 PF03852 DNA mismatch endonuclease Vsr SG48_RS10230 PF18284 DNA methylase N-terminal domain SG48_RS10230 PF00145 C-5 cytosine-specific DNA methylase SG48_RS10235 PF01966 HD domain SG48_RS10265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS10265 PF00512 His Kinase A (phospho-acceptor) domain SG48_RS10270 PF00486 Transcriptional regulatory protein, C terminal SG48_RS10270 PF00072 Response regulator receiver domain SG48_RS10275 PF00576 HIUase/Transthyretin family SG48_RS10280 PF00174 Oxidoreductase molybdopterin binding domain SG48_RS10285 PF01794 Ferric reductase like transmembrane component SG48_RS10290 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SG48_RS10295 PF01292 Prokaryotic cytochrome b561 SG48_RS10310 PF06167 Glucose-regulated metallo-peptidase M90 SG48_RS10320 PF09134 Invasin, domain 3 SG48_RS10320 PF11924 Inverse autotransporter, beta-domain SG48_RS10320 PF02369 Bacterial Ig-like domain (group 1) SG48_RS10330 PF00083 Sugar (and other) transporter SG48_RS10330 PF07690 Major Facilitator Superfamily SG48_RS10335 PF01048 Phosphorylase superfamily SG48_RS10335 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus SG48_RS10340 PF01709 Transcriptional regulator SG48_RS10350 PF01554 MatE SG48_RS10360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS10360 PF03466 LysR substrate binding domain SG48_RS10365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS10365 PF03466 LysR substrate binding domain SG48_RS10375 PF17969 L,D-transpeptidase C-terminal domain SG48_RS10375 PF03734 L,D-transpeptidase catalytic domain SG48_RS10380 PF02277 Phosphoribosyltransferase SG48_RS10385 PF02654 Cobalamin-5-phosphate synthase SG48_RS10390 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase SG48_RS10400 PF01609 Transposase DDE domain SG48_RS10400 PF05598 Transposase domain (DUF772) SG48_RS10410 PF00665 Integrase core domain SG48_RS10410 PF13276 HTH-like domain SG48_RS10415 PF01527 Transposase SG48_RS10420 PF07715 TonB-dependent Receptor Plug Domain SG48_RS10420 PF00593 TonB dependent receptor SG48_RS10430 PF16168 Adhesin of bacterial autotransporter system, probable stalk SG48_RS10430 PF13018 Extended Signal Peptide of Type V secretion system SG48_RS10430 PF03797 Autotransporter beta-domain SG48_RS10440 PF04002 RadC-like JAB domain SG48_RS10445 PF06174 Protein of unknown function (DUF987) SG48_RS10450 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A SG48_RS10455 PF06755 CbtA_toxin of type IV toxin-antitoxin system SG48_RS10470 PF10662 Ethanolamine utilisation - propanediol utilisation SG48_RS10475 PF04363 Protein of unknown function (DUF496) SG48_RS10480 PF04632 Fusaric acid resistance protein family SG48_RS10485 PF06445 GyrI-like small molecule binding domain SG48_RS10490 PF00768 D-alanyl-D-alanine carboxypeptidase SG48_RS10490 PF07943 Penicillin-binding protein 5, C-terminal domain SG48_RS10495 PF08411 Exonuclease C-terminal SG48_RS10495 PF00929 Exonuclease SG48_RS10500 PF01206 Sulfurtransferase TusA SG48_RS10505 PF04143 Sulphur transport SG48_RS10510 PF13520 Amino acid permease SG48_RS10515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS10515 PF03466 LysR substrate binding domain SG48_RS10520 PF01370 NAD dependent epimerase/dehydratase family SG48_RS10525 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system SG48_RS10530 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system SG48_RS10535 PF08029 HisG, C-terminal domain SG48_RS10535 PF01634 ATP phosphoribosyltransferase SG48_RS10540 PF00815 Histidinol dehydrogenase SG48_RS10545 PF00155 Aminotransferase class I and II SG48_RS10550 PF08645 Polynucleotide kinase 3 phosphatase SG48_RS10550 PF00475 Imidazoleglycerol-phosphate dehydratase SG48_RS10555 PF00117 Glutamine amidotransferase class-I SG48_RS10560 PF00977 Histidine biosynthesis protein SG48_RS10565 PF00977 Histidine biosynthesis protein SG48_RS10570 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SG48_RS10570 PF01502 Phosphoribosyl-AMP cyclohydrolase SG48_RS10575 PF02706 Chain length determinant protein SG48_RS10580 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SG48_RS10580 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SG48_RS10580 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SG48_RS10585 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SG48_RS10585 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SG48_RS10590 PF01609 Transposase DDE domain SG48_RS10590 PF05598 Transposase domain (DUF772) SG48_RS10600 PF00534 Glycosyl transferases group 1 SG48_RS10605 PF00132 Bacterial transferase hexapeptide (six repeats) SG48_RS10620 PF03275 UDP-galactopyranose mutase SG48_RS10625 PF01943 Polysaccharide biosynthesis protein SG48_RS10630 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SG48_RS10635 PF00483 Nucleotidyl transferase SG48_RS10640 PF04321 RmlD substrate binding domain SG48_RS10645 PF16363 GDP-mannose 4,6 dehydratase SG48_RS10650 PF00483 Nucleotidyl transferase SG48_RS10660 PF13439 Glycosyltransferase Family 4 SG48_RS10660 PF00534 Glycosyl transferases group 1 SG48_RS10665 PF04230 Polysaccharide pyruvyl transferase SG48_RS10675 PF02397 Bacterial sugar transferase SG48_RS10680 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SG48_RS10680 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SG48_RS10680 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SG48_RS10680 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SG48_RS10685 PF00483 Nucleotidyl transferase SG48_RS10685 PF01050 Mannose-6-phosphate isomerase SG48_RS10690 PF13579 Glycosyl transferase 4-like domain SG48_RS10690 PF00534 Glycosyl transferases group 1 SG48_RS10695 PF00293 NUDIX domain SG48_RS10700 PF01370 NAD dependent epimerase/dehydratase family SG48_RS10705 PF16363 GDP-mannose 4,6 dehydratase SG48_RS10710 PF00132 Bacterial transferase hexapeptide (six repeats) SG48_RS10715 PF00535 Glycosyl transferase family 2 SG48_RS10725 PF00534 Glycosyl transferases group 1 SG48_RS10725 PF13439 Glycosyltransferase Family 4 SG48_RS10730 PF00132 Bacterial transferase hexapeptide (six repeats) SG48_RS10735 PF00535 Glycosyl transferase family 2 SG48_RS10740 PF13614 AAA domain SG48_RS10740 PF13807 G-rich domain on putative tyrosine kinase SG48_RS10740 PF02706 Chain length determinant protein SG48_RS10745 PF01451 Low molecular weight phosphotyrosine protein phosphatase SG48_RS10750 PF18412 Outer-membrane lipoprotein Wza C-terminal domain SG48_RS10750 PF02563 Polysaccharide biosynthesis/export protein SG48_RS10750 PF10531 SLBB domain SG48_RS10755 PF00571 CBS domain SG48_RS10755 PF03471 Transporter associated domain SG48_RS10755 PF03741 Integral membrane protein TerC family SG48_RS10760 PF05170 AsmA family SG48_RS10765 PF00692 dUTPase SG48_RS10770 PF00485 Phosphoribulokinase / Uridine kinase family SG48_RS10775 PF13426 PAS domain SG48_RS10775 PF08448 PAS fold SG48_RS10775 PF00990 Diguanylate cyclase, GGDEF domain SG48_RS10775 PF00563 EAL domain SG48_RS10775 PF05231 MASE1 SG48_RS10775 PF08447 PAS fold SG48_RS10780 PF00730 HhH-GPD superfamily base excision DNA repair protein SG48_RS10780 PF06029 AlkA N-terminal domain SG48_RS10790 PF00012 Hsp70 protein SG48_RS10800 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) SG48_RS10810 PF00092 von Willebrand factor type A domain SG48_RS10815 PF13533 Biotin-lipoyl like SG48_RS10820 PF00873 AcrB/AcrD/AcrF family SG48_RS10825 PF00873 AcrB/AcrD/AcrF family SG48_RS10830 PF07690 Major Facilitator Superfamily SG48_RS10835 PF00672 HAMP domain SG48_RS10835 PF00512 His Kinase A (phospho-acceptor) domain SG48_RS10835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS10840 PF00072 Response regulator receiver domain SG48_RS10840 PF00486 Transcriptional regulatory protein, C terminal SG48_RS10845 PF07411 Domain of unknown function (DUF1508) SG48_RS10850 PF01136 Peptidase family U32 SG48_RS10850 PF16325 Peptidase family U32 C-terminal domain SG48_RS10870 PF00781 Diacylglycerol kinase catalytic domain SG48_RS10880 PF01527 Transposase SG48_RS10885 PF00665 Integrase core domain SG48_RS10885 PF13333 Integrase core domain SG48_RS10885 PF13276 HTH-like domain SG48_RS10890 PF08220 DeoR-like helix-turn-helix domain SG48_RS10895 PF08240 Alcohol dehydrogenase GroES-like domain SG48_RS10895 PF00107 Zinc-binding dehydrogenase SG48_RS10900 PF03611 PTS system sugar-specific permease component SG48_RS10905 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SG48_RS10910 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SG48_RS10915 PF08013 Tagatose 6 phosphate kinase SG48_RS10920 PF01116 Fructose-bisphosphate aldolase class-II SG48_RS10925 PF01791 DeoC/LacD family aldolase SG48_RS10930 PF03825 Nucleoside H+ symporter SG48_RS10935 PF03747 ADP-ribosylglycohydrolase SG48_RS10940 PF00294 pfkB family carbohydrate kinase SG48_RS10945 PF07702 UTRA domain SG48_RS10945 PF00392 Bacterial regulatory proteins, gntR family SG48_RS10950 PF01183 Glycosyl hydrolases family 25 SG48_RS10955 PF08543 Phosphomethylpyrimidine kinase SG48_RS10960 PF02110 Hydroxyethylthiazole kinase family SG48_RS10965 PF02583 Metal-sensitive transcriptional repressor SG48_RS10970 PF03824 High-affinity nickel-transport protein SG48_RS10975 PF11776 Nickel/cobalt transporter regulator SG48_RS10980 PF00419 Fimbrial protein SG48_RS10985 PF13954 PapC N-terminal domain SG48_RS10985 PF13953 PapC C-terminal domain SG48_RS10985 PF00577 Outer membrane usher protein SG48_RS10990 PF02753 Pili assembly chaperone PapD, C-terminal domain SG48_RS10990 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SG48_RS10995 PF00419 Fimbrial protein SG48_RS11005 PF10836 Protein of unknown function (DUF2574) SG48_RS11010 PF10609 NUBPL iron-transfer P-loop NTPase SG48_RS11015 PF09334 tRNA synthetases class I (M) SG48_RS11015 PF01588 Putative tRNA binding domain SG48_RS11020 PF05406 WGR domain SG48_RS11030 PF13569 Domain of unknown function (DUF4132) SG48_RS11040 PF07728 AAA domain (dynein-related subfamily) SG48_RS11050 PF05762 VWA domain containing CoxE-like protein SG48_RS11055 PF04434 SWIM zinc finger SG48_RS11060 PF06998 Protein of unknown function (DUF1307) SG48_RS11065 PF07308 Protein of unknown function (DUF1456) SG48_RS11070 PF00072 Response regulator receiver domain SG48_RS11070 PF04397 LytTr DNA-binding domain SG48_RS11075 PF06580 Histidine kinase SG48_RS11075 PF07694 5TMR of 5TMR-LYT SG48_RS11080 PF13411 MerR HTH family regulatory protein SG48_RS11090 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS11095 PF00005 ABC transporter SG48_RS11100 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS11105 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SG48_RS11110 PF00933 Glycosyl hydrolase family 3 N terminal domain SG48_RS11110 PF14310 Fibronectin type III-like domain SG48_RS11110 PF01915 Glycosyl hydrolase family 3 C-terminal domain SG48_RS11115 PF01565 FAD binding domain SG48_RS11115 PF09330 D-lactate dehydrogenase, membrane binding SG48_RS11120 PF00768 D-alanyl-D-alanine carboxypeptidase SG48_RS11125 PF04893 Yip1 domain SG48_RS11130 PF09335 SNARE associated Golgi protein SG48_RS11150 PF01207 Dihydrouridine synthase (Dus) SG48_RS11155 PF03788 LrgA family SG48_RS11160 PF04172 LrgB-like family SG48_RS11165 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region SG48_RS11165 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SG48_RS11170 PF02698 DUF218 domain SG48_RS11175 PF10808 Protein of unknown function (DUF2542) SG48_RS11180 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SG48_RS11180 PF07992 Pyridine nucleotide-disulphide oxidoreductase SG48_RS11185 PF01180 Dihydroorotate dehydrogenase SG48_RS11190 PF02653 Branched-chain amino acid transport system / permease component SG48_RS11195 PF00005 ABC transporter SG48_RS11200 PF13407 Periplasmic binding protein domain SG48_RS11205 PF00356 Bacterial regulatory proteins, lacI family SG48_RS11215 PF04235 Protein of unknown function (DUF418) SG48_RS11220 PF01227 GTP cyclohydrolase I SG48_RS11230 PF00756 Putative esterase SG48_RS11235 PF00593 TonB dependent receptor SG48_RS11235 PF07715 TonB-dependent Receptor Plug Domain SG48_RS11240 PF00324 Amino acid permease SG48_RS11245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS11245 PF03466 LysR substrate binding domain SG48_RS11250 PF03601 Conserved hypothetical protein 698 SG48_RS11255 PF01261 Xylose isomerase-like TIM barrel SG48_RS11260 PF00294 pfkB family carbohydrate kinase SG48_RS11265 PF01773 Na+ dependent nucleoside transporter N-terminus SG48_RS11265 PF07662 Na+ dependent nucleoside transporter C-terminus SG48_RS11270 PF01156 Inosine-uridine preferring nucleoside hydrolase SG48_RS11275 PF00027 Cyclic nucleotide-binding domain SG48_RS11280 PF01773 Na+ dependent nucleoside transporter N-terminus SG48_RS11280 PF07662 Na+ dependent nucleoside transporter C-terminus SG48_RS11285 PF04227 Indigoidine synthase A like protein SG48_RS11290 PF00294 pfkB family carbohydrate kinase SG48_RS11295 PF02378 Phosphotransferase system, EIIC SG48_RS11295 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SG48_RS11300 PF00294 pfkB family carbohydrate kinase SG48_RS11305 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SG48_RS11305 PF00381 PTS HPr component phosphorylation site SG48_RS11310 PF07690 Major Facilitator Superfamily SG48_RS11315 PF03692 Putative zinc- or iron-chelating domain SG48_RS11320 PF09285 Elongation factor P, C-terminal SG48_RS11320 PF08207 Elongation factor P (EF-P) KOW-like domain SG48_RS11320 PF01132 Elongation factor P (EF-P) OB domain SG48_RS11325 PF01232 Mannitol dehydrogenase Rossmann domain SG48_RS11325 PF08125 Mannitol dehydrogenase C-terminal domain SG48_RS11330 PF02492 CobW/HypB/UreG, nucleotide-binding domain SG48_RS11330 PF07683 Cobalamin synthesis protein cobW C-terminal domain SG48_RS11335 PF01569 PAP2 superfamily SG48_RS11340 PF00877 NlpC/P60 family SG48_RS11345 PF00563 EAL domain SG48_RS11345 PF12792 CSS motif domain associated with EAL SG48_RS11350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SG48_RS11355 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS11360 PF12911 N-terminal TM domain of oligopeptide transport permease C SG48_RS11360 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS11365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SG48_RS11365 PF00005 ABC transporter SG48_RS11370 PF13989 YejG-like protein SG48_RS11375 PF07690 Major Facilitator Superfamily SG48_RS11380 PF00849 RNA pseudouridylate synthase SG48_RS11380 PF01479 S4 domain SG48_RS11385 PF04851 Type III restriction enzyme, res subunit SG48_RS11385 PF00271 Helicase conserved C-terminal domain SG48_RS11390 PF01386 Ribosomal L25p family SG48_RS11395 PF04245 37-kD nucleoid-associated bacterial protein SG48_RS11400 PF07208 Protein of unknown function (DUF1414) SG48_RS11405 PF11893 Domain of unknown function (DUF3413) SG48_RS11405 PF00884 Sulfatase SG48_RS11415 PF03797 Autotransporter beta-domain SG48_RS11415 PF03212 Pertactin SG48_RS11415 PF16168 Adhesin of bacterial autotransporter system, probable stalk SG48_RS11420 PF01609 Transposase DDE domain SG48_RS11420 PF05598 Transposase domain (DUF772) SG48_RS11430 PF00196 Bacterial regulatory proteins, luxR family SG48_RS11430 PF00072 Response regulator receiver domain SG48_RS11435 PF03918 Cytochrome C biogenesis protein SG48_RS11440 PF08534 Redoxin SG48_RS11445 PF01578 Cytochrome C assembly protein SG48_RS11445 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal SG48_RS11450 PF03100 CcmE SG48_RS11455 PF04995 Heme exporter protein D (CcmD) SG48_RS11460 PF01578 Cytochrome C assembly protein SG48_RS11465 PF03379 CcmB protein SG48_RS11470 PF00005 ABC transporter SG48_RS11475 PF03264 NapC/NirT cytochrome c family, N-terminal region SG48_RS11480 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) SG48_RS11485 PF12801 4Fe-4S binding domain SG48_RS11485 PF13237 4Fe-4S dicluster domain SG48_RS11490 PF12800 4Fe-4S binding domain SG48_RS11490 PF12838 4Fe-4S dicluster domain SG48_RS11495 PF01568 Molydopterin dinucleotide binding domain SG48_RS11495 PF00384 Molybdopterin oxidoreductase SG48_RS11495 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SG48_RS11500 PF03927 NapD protein SG48_RS11505 PF12800 4Fe-4S binding domain SG48_RS11505 PF13187 4Fe-4S dicluster domain SG48_RS11505 PF00037 4Fe-4S binding domain SG48_RS11515 PF03974 Ecotin SG48_RS11520 PF06039 Malate:quinone oxidoreductase (Mqo) SG48_RS11525 PF00005 ABC transporter SG48_RS11530 PF13532 2OG-Fe(II) oxygenase superfamily SG48_RS11535 PF02805 Metal binding domain of Ada SG48_RS11535 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SG48_RS11535 PF12833 Helix-turn-helix domain SG48_RS11535 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SG48_RS11540 PF02424 ApbE family SG48_RS11545 PF00267 Gram-negative porin SG48_RS11560 PF16359 RcsD-ABL domain SG48_RS11560 PF01627 Hpt domain SG48_RS11560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS11565 PF00072 Response regulator receiver domain SG48_RS11565 PF00196 Bacterial regulatory proteins, luxR family SG48_RS11570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS11570 PF00512 His Kinase A (phospho-acceptor) domain SG48_RS11570 PF09456 RcsC Alpha-Beta-Loop (ABL) SG48_RS11570 PF00072 Response regulator receiver domain SG48_RS11575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS11575 PF00989 PAS fold SG48_RS11575 PF00512 His Kinase A (phospho-acceptor) domain SG48_RS11580 PF02954 Bacterial regulatory protein, Fis family SG48_RS11580 PF00072 Response regulator receiver domain SG48_RS11580 PF00158 Sigma-54 interaction domain SG48_RS11585 PF01144 Coenzyme A transferase SG48_RS11590 PF01144 Coenzyme A transferase SG48_RS11595 PF02667 Short chain fatty acid transporter SG48_RS11600 PF00108 Thiolase, N-terminal domain SG48_RS11600 PF02803 Thiolase, C-terminal domain SG48_RS11605 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) SG48_RS11610 PF08486 Stage II sporulation protein SG48_RS11610 PF10062 Predicted secreted protein (DUF2300) SG48_RS11615 PF00207 Alpha-2-macroglobulin family SG48_RS11615 PF01835 MG2 domain SG48_RS11615 PF07703 Alpha-2-macroglobulin bait region domain SG48_RS11620 PF01835 MG2 domain SG48_RS11620 PF00207 Alpha-2-macroglobulin family SG48_RS11620 PF07703 Alpha-2-macroglobulin bait region domain SG48_RS11625 PF06672 Protein of unknown function (DUF1175) SG48_RS11630 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) SG48_RS11635 PF03989 DNA gyrase C-terminal domain, beta-propeller SG48_RS11635 PF00521 DNA gyrase/topoisomerase IV, subunit A SG48_RS11645 PF12951 Passenger-associated-transport-repeat SG48_RS11645 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat SG48_RS11645 PF03797 Autotransporter beta-domain SG48_RS11655 PF00317 Ribonucleotide reductase, all-alpha domain SG48_RS11655 PF03477 ATP cone domain SG48_RS11655 PF02867 Ribonucleotide reductase, barrel domain SG48_RS11660 PF00268 Ribonucleotide reductase, small chain SG48_RS11665 PF00111 2Fe-2S iron-sulfur cluster binding domain SG48_RS11680 PF03009 Glycerophosphoryl diester phosphodiesterase family SG48_RS11685 PF07690 Major Facilitator Superfamily SG48_RS11690 PF01266 FAD dependent oxidoreductase SG48_RS11690 PF04324 BFD-like [2Fe-2S] binding domain SG48_RS11695 PF00890 FAD binding domain SG48_RS11700 PF13183 4Fe-4S dicluster domain SG48_RS11700 PF02754 Cysteine-rich domain SG48_RS11705 PF04754 Putative transposase, YhgA-like SG48_RS11715 PF03328 HpcH/HpaI aldolase/citrate lyase family SG48_RS11720 PF07690 Major Facilitator Superfamily SG48_RS11725 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SG48_RS11725 PF13378 Enolase C-terminal domain-like SG48_RS11730 PF09339 IclR helix-turn-helix domain SG48_RS11730 PF01614 Bacterial transcriptional regulator SG48_RS11735 PF00994 Probable molybdopterin binding domain SG48_RS11740 PF07437 YfaZ precursor SG48_RS11745 PF00293 NUDIX domain SG48_RS11750 PF00300 Histidine phosphatase superfamily (branch 1) SG48_RS11755 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SG48_RS11760 PF00535 Glycosyl transferase family 2 SG48_RS11765 PF00551 Formyl transferase SG48_RS11765 PF02911 Formyl transferase, C-terminal domain SG48_RS11765 PF01370 NAD dependent epimerase/dehydratase family SG48_RS11770 PF01522 Polysaccharide deacetylase SG48_RS11775 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase SG48_RS11780 PF00892 EamA-like transporter family SG48_RS11795 PF13193 AMP-binding enzyme C-terminal domain SG48_RS11795 PF00501 AMP-binding enzyme SG48_RS11800 PF13378 Enolase C-terminal domain-like SG48_RS11805 PF00378 Enoyl-CoA hydratase/isomerase SG48_RS11810 PF12697 Alpha/beta hydrolase family SG48_RS11815 PF16582 Middle domain of thiamine pyrophosphate SG48_RS11815 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SG48_RS11815 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SG48_RS11820 PF00425 chorismate binding enzyme SG48_RS11825 PF05957 Bacterial protein of unknown function (DUF883) SG48_RS11830 PF13673 Acetyltransferase (GNAT) domain SG48_RS11835 PF12706 Beta-lactamase superfamily domain SG48_RS11840 PF02902 Ulp1 protease family, C-terminal catalytic domain SG48_RS11845 PF00092 von Willebrand factor type A domain SG48_RS11845 PF12034 Domain of unknown function (DUF3520) SG48_RS11845 PF12450 von Willebrand factor SG48_RS11850 PF04389 Peptidase family M28 SG48_RS11855 PF08974 Domain of unknown function (DUF1877) SG48_RS11875 PF00361 Proton-conducting membrane transporter SG48_RS11880 PF00361 Proton-conducting membrane transporter SG48_RS11885 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SG48_RS11885 PF00361 Proton-conducting membrane transporter SG48_RS11890 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SG48_RS11895 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 SG48_RS11900 PF12838 4Fe-4S dicluster domain SG48_RS11905 PF00146 NADH dehydrogenase SG48_RS11910 PF01568 Molydopterin dinucleotide binding domain SG48_RS11910 PF00384 Molybdopterin oxidoreductase SG48_RS11910 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SG48_RS11910 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SG48_RS11915 PF10531 SLBB domain SG48_RS11915 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SG48_RS11915 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SG48_RS11925 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SG48_RS11925 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SG48_RS11930 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SG48_RS11935 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 SG48_RS11940 PF03466 LysR substrate binding domain SG48_RS11940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS11945 PF00155 Aminotransferase class I and II SG48_RS11955 PF02080 TrkA-C domain SG48_RS11955 PF03600 Citrate transporter SG48_RS11960 PF13419 Haloacid dehalogenase-like hydrolase SG48_RS11965 PF03887 YfbU domain SG48_RS11970 PF04217 Protein of unknown function, DUF412 SG48_RS11980 PF00871 Acetokinase family SG48_RS11985 PF01515 Phosphate acetyl/butaryl transferase SG48_RS11985 PF07085 DRTGG domain SG48_RS11990 PF03606 C4-dicarboxylate anaerobic carrier SG48_RS11995 PF00293 NUDIX domain SG48_RS12000 PF12850 Calcineurin-like phosphoesterase superfamily domain SG48_RS12005 PF02798 Glutathione S-transferase, N-terminal domain SG48_RS12005 PF14834 Glutathione S-transferase, C-terminal domain SG48_RS12010 PF00043 Glutathione S-transferase, C-terminal domain SG48_RS12010 PF02798 Glutathione S-transferase, N-terminal domain SG48_RS12015 PF02152 Dihydroneopterin aldolase SG48_RS12020 PF08338 Domain of unknown function (DUF1731) SG48_RS12020 PF01370 NAD dependent epimerase/dehydratase family SG48_RS12025 PF04754 Putative transposase, YhgA-like SG48_RS12030 PF00005 ABC transporter SG48_RS12035 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS12040 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS12045 PF00497 Bacterial extracellular solute-binding proteins, family 3 SG48_RS12050 PF00497 Bacterial extracellular solute-binding proteins, family 3 SG48_RS12055 PF02441 Flavoprotein SG48_RS12060 PF00156 Phosphoribosyl transferase domain SG48_RS12065 PF02674 Colicin V production protein SG48_RS12070 PF05036 Sporulation related domain SG48_RS12075 PF08245 Mur ligase middle domain SG48_RS12075 PF02875 Mur ligase family, glutamate ligase domain SG48_RS12080 PF17848 Acetyl-coA carboxylase zinc finger domain SG48_RS12080 PF01039 Carboxyl transferase domain SG48_RS12085 PF09335 SNARE associated Golgi protein SG48_RS12090 PF01416 tRNA pseudouridine synthase SG48_RS12095 PF02774 Semialdehyde dehydrogenase, dimerisation domain SG48_RS12095 PF01118 Semialdehyde dehydrogenase, NAD binding domain SG48_RS12100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SG48_RS12100 PF11890 Domain of unknown function (DUF3410) SG48_RS12100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SG48_RS12110 PF07690 Major Facilitator Superfamily SG48_RS12115 PF00109 Beta-ketoacyl synthase, N-terminal domain SG48_RS12115 PF02801 Beta-ketoacyl synthase, C-terminal domain SG48_RS12120 PF01266 FAD dependent oxidoreductase SG48_RS12120 PF05430 S-adenosyl-L-methionine-dependent methyltransferase SG48_RS12125 PF08891 YfcL protein SG48_RS12130 PF04315 Elongation factor P hydroxylase SG48_RS12135 PF01925 Sulfite exporter TauE/SafE SG48_RS12140 PF03411 Penicillin-insensitive murein endopeptidase SG48_RS12145 PF01264 Chorismate synthase SG48_RS12150 PF05175 Methyltransferase small domain SG48_RS12155 PF01713 Smr domain SG48_RS12160 PF11245 Protein of unknown function (DUF2544) SG48_RS12165 PF00419 Fimbrial protein SG48_RS12170 PF00419 Fimbrial protein SG48_RS12175 PF00419 Fimbrial protein SG48_RS12180 PF02753 Pili assembly chaperone PapD, C-terminal domain SG48_RS12180 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SG48_RS12190 PF00419 Fimbrial protein SG48_RS12195 PF00300 Histidine phosphatase superfamily (branch 1) SG48_RS12200 PF00378 Enoyl-CoA hydratase/isomerase SG48_RS12200 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SG48_RS12200 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SG48_RS12205 PF02803 Thiolase, C-terminal domain SG48_RS12205 PF00108 Thiolase, N-terminal domain SG48_RS12210 PF04175 Protein of unknown function (DUF406) SG48_RS12215 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) SG48_RS12225 PF04333 MlaA lipoprotein SG48_RS12230 PF01226 Formate/nitrite transporter SG48_RS12240 PF13356 Arm DNA-binding domain SG48_RS12240 PF14659 Phage integrase, N-terminal SAM-like domain SG48_RS12240 PF00589 Phage integrase family SG48_RS12245 PF04138 GtrA-like protein SG48_RS12250 PF00535 Glycosyl transferase family 2 SG48_RS12260 PF02413 Caudovirales tail fibre assembly protein, lambda gpK SG48_RS12265 PF02413 Caudovirales tail fibre assembly protein, lambda gpK SG48_RS12275 PF05869 DNA N-6-adenine-methyltransferase (Dam) SG48_RS12280 PF06069 PerC transcriptional activator SG48_RS12295 PF10065 Uncharacterized conserved protein (DUF2303) SG48_RS12320 PF03466 LysR substrate binding domain SG48_RS12320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS12325 PF02447 GntP family permease SG48_RS12330 PF00291 Pyridoxal-phosphate dependent enzyme SG48_RS12335 PF07690 Major Facilitator Superfamily SG48_RS12340 PF00529 HlyD membrane-fusion protein of T1SS SG48_RS12340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SG48_RS12345 PF00072 Response regulator receiver domain SG48_RS12345 PF00196 Bacterial regulatory proteins, luxR family SG48_RS12350 PF00497 Bacterial extracellular solute-binding proteins, family 3 SG48_RS12350 PF00072 Response regulator receiver domain SG48_RS12350 PF01627 Hpt domain SG48_RS12350 PF00512 His Kinase A (phospho-acceptor) domain SG48_RS12350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS12355 PF02515 CoA-transferase family III SG48_RS12360 PF03547 Membrane transport protein SG48_RS12365 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SG48_RS12365 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SG48_RS12365 PF00205 Thiamine pyrophosphate enzyme, central domain SG48_RS12370 PF02515 CoA-transferase family III SG48_RS12375 PF10938 YfdX protein SG48_RS12390 PF10810 Protein of unknown function (DUF2545) SG48_RS12395 PF03279 Bacterial lipid A biosynthesis acyltransferase SG48_RS12400 PF00155 Aminotransferase class I and II SG48_RS12405 PF06580 Histidine kinase SG48_RS12405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS12405 PF07694 5TMR of 5TMR-LYT SG48_RS12410 PF00072 Response regulator receiver domain SG48_RS12410 PF04397 LytTr DNA-binding domain SG48_RS12415 PF12833 Helix-turn-helix domain SG48_RS12420 PF02896 PEP-utilising enzyme, TIM barrel domain SG48_RS12420 PF00391 PEP-utilising enzyme, mobile domain SG48_RS12420 PF00381 PTS HPr component phosphorylation site SG48_RS12420 PF05524 PEP-utilising enzyme, N-terminal SG48_RS12420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SG48_RS12425 PF05343 M42 glutamyl aminopeptidase SG48_RS12430 PF01321 Creatinase/Prolidase N-terminal domain SG48_RS12430 PF00557 Metallopeptidase family M24 SG48_RS12435 PF02378 Phosphotransferase system, EIIC SG48_RS12440 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SG48_RS12445 PF02685 Glucokinase SG48_RS12450 PF00654 Voltage gated chloride channel SG48_RS12455 PF10697 Protein of unknown function (DUF2502) SG48_RS12465 PF01566 Natural resistance-associated macrophage protein SG48_RS12470 PF07670 Nucleoside recognition SG48_RS12470 PF07662 Na+ dependent nucleoside transporter C-terminus SG48_RS12470 PF01773 Na+ dependent nucleoside transporter N-terminus SG48_RS12475 PF01609 Transposase DDE domain SG48_RS12480 PF00563 EAL domain SG48_RS12480 PF05231 MASE1 SG48_RS12495 PF07037 Putative transcription regulator (DUF1323) SG48_RS12500 PF07037 Putative transcription regulator (DUF1323) SG48_RS12505 PF00749 tRNA synthetases class I (E and Q), catalytic domain SG48_RS12530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS12530 PF03466 LysR substrate binding domain SG48_RS12540 PF03825 Nucleoside H+ symporter SG48_RS12545 PF01048 Phosphorylase superfamily SG48_RS12550 PF03502 Nucleoside-specific channel-forming protein, Tsx SG48_RS12555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS12555 PF03466 LysR substrate binding domain SG48_RS12560 PF13593 SBF-like CPA transporter family (DUF4137) SG48_RS12565 PF12843 Putative quorum-sensing-regulated virulence factor SG48_RS12570 PF03120 NAD-dependent DNA ligase OB-fold domain SG48_RS12570 PF01653 NAD-dependent DNA ligase adenylation domain SG48_RS12570 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SG48_RS12570 PF12826 Helix-hairpin-helix motif SG48_RS12570 PF00533 BRCA1 C Terminus (BRCT) domain SG48_RS12575 PF04354 ZipA, C-terminal FtsZ-binding domain SG48_RS12585 PF00291 Pyridoxal-phosphate dependent enzyme SG48_RS12590 PF00381 PTS HPr component phosphorylation site SG48_RS12595 PF02896 PEP-utilising enzyme, TIM barrel domain SG48_RS12595 PF05524 PEP-utilising enzyme, N-terminal SG48_RS12595 PF00391 PEP-utilising enzyme, mobile domain SG48_RS12600 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SG48_RS12605 PF08543 Phosphomethylpyrimidine kinase SG48_RS12610 PF17263 Family of unknown function (DUF5329) SG48_RS12615 PF05406 WGR domain SG48_RS12620 PF00291 Pyridoxal-phosphate dependent enzyme SG48_RS12625 PF00005 ABC transporter SG48_RS12630 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS12635 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS12650 PF01380 SIS domain SG48_RS12650 PF01418 Helix-turn-helix domain, rpiR family SG48_RS12655 PF01380 SIS domain SG48_RS12660 PF00367 phosphotransferase system, EIIB SG48_RS12660 PF02378 Phosphotransferase system, EIIC SG48_RS12665 PF00144 Beta-lactamase SG48_RS12670 PF04261 Dyp-type peroxidase family SG48_RS12675 PF06572 Protein of unknown function (DUF1131) SG48_RS12680 PF11143 Protein of unknown function (DUF2919) SG48_RS12685 PF00583 Acetyltransferase (GNAT) family SG48_RS12690 PF01520 N-acetylmuramoyl-L-alanine amidase SG48_RS12695 PF01218 Coproporphyrinogen III oxidase SG48_RS12700 PF12833 Helix-turn-helix domain SG48_RS12705 PF00936 BMC domain SG48_RS12705 PF16365 Ethanolamine utilization protein EutK C-terminus SG48_RS12710 PF00936 BMC domain SG48_RS12715 PF05985 Ethanolamine ammonia-lyase light chain (EutC) SG48_RS12720 PF06751 Ethanolamine ammonia lyase large subunit (EutB) SG48_RS12725 PF13356 Arm DNA-binding domain SG48_RS12725 PF00589 Phage integrase family SG48_RS12770 PF06277 Ethanolamine utilisation protein EutA SG48_RS12775 PF04346 Ethanolamine utilisation protein, EutH SG48_RS12780 PF00465 Iron-containing alcohol dehydrogenase SG48_RS12790 PF00171 Aldehyde dehydrogenase family SG48_RS12795 PF03319 Ethanolamine utilisation protein EutN/carboxysome SG48_RS12800 PF00936 BMC domain SG48_RS12805 PF01515 Phosphate acetyl/butaryl transferase SG48_RS12810 PF01923 Cobalamin adenosyltransferase SG48_RS12815 PF06249 Ethanolamine utilisation protein EutQ SG48_RS12820 PF10662 Ethanolamine utilisation - propanediol utilisation SG48_RS12825 PF00936 BMC domain SG48_RS12830 PF00390 Malic enzyme, N-terminal domain SG48_RS12830 PF03949 Malic enzyme, NAD binding domain SG48_RS12830 PF01515 Phosphate acetyl/butaryl transferase SG48_RS12835 PF00923 Transaldolase/Fructose-6-phosphate aldolase SG48_RS12840 PF02779 Transketolase, pyrimidine binding domain SG48_RS12840 PF02780 Transketolase, C-terminal domain SG48_RS12840 PF00456 Transketolase, thiamine diphosphate binding domain SG48_RS12845 PF06674 Protein of unknown function (DUF1176) SG48_RS12850 PF00293 NUDIX domain SG48_RS12855 PF13247 4Fe-4S dicluster domain SG48_RS12855 PF07992 Pyridine nucleotide-disulphide oxidoreductase SG48_RS12855 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SG48_RS12860 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term SG48_RS12860 PF00672 HAMP domain SG48_RS12860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS12860 PF07730 Histidine kinase SG48_RS12865 PF00873 AcrB/AcrD/AcrF family SG48_RS12875 PF03960 ArsC family SG48_RS12880 PF07687 Peptidase dimerisation domain SG48_RS12880 PF01546 Peptidase family M20/M25/M40 SG48_RS12885 PF13980 Uncharacterised protein family (UPF0370) SG48_RS12890 PF02230 Phospholipase/Carboxylesterase SG48_RS12895 PF08351 Domain of unknown function (DUF1726) SG48_RS12895 PF17176 tRNA-binding domain SG48_RS12895 PF13718 GNAT acetyltransferase 2 SG48_RS12895 PF05127 Helicase SG48_RS12900 PF04228 Putative neutral zinc metallopeptidase SG48_RS12905 PF01259 SAICAR synthetase SG48_RS12915 PF06804 NlpB/DapX lipoprotein SG48_RS12920 PF00701 Dihydrodipicolinate synthetase family SG48_RS12925 PF01842 ACT domain SG48_RS12930 PF00578 AhpC/TSA family SG48_RS12935 PF00037 4Fe-4S binding domain SG48_RS12935 PF12798 4Fe-4S binding domain SG48_RS12940 PF00361 Proton-conducting membrane transporter SG48_RS12945 PF00146 NADH dehydrogenase SG48_RS12950 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SG48_RS12950 PF00361 Proton-conducting membrane transporter SG48_RS12955 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SG48_RS12960 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SG48_RS12960 PF00361 Proton-conducting membrane transporter SG48_RS12965 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SG48_RS12965 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SG48_RS12965 PF00374 Nickel-dependent hydrogenase SG48_RS12970 PF12838 4Fe-4S dicluster domain SG48_RS12975 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SG48_RS12980 PF07450 Formate hydrogenlyase maturation protein HycH SG48_RS12985 PF00158 Sigma-54 interaction domain SG48_RS12985 PF01590 GAF domain SG48_RS12990 PF01226 Formate/nitrite transporter SG48_RS12995 PF01594 AI-2E family transporter SG48_RS13000 PF01435 Peptidase family M48 SG48_RS13005 PF03960 ArsC family SG48_RS13010 PF00308 Bacterial dnaA protein SG48_RS13015 PF00860 Permease family SG48_RS13025 PF00586 AIR synthase related protein, N-terminal domain SG48_RS13025 PF02769 AIR synthase related protein, C-terminal domain SG48_RS13030 PF00551 Formyl transferase SG48_RS13035 PF13089 Polyphosphate kinase N-terminal domain SG48_RS13035 PF02503 Polyphosphate kinase middle domain SG48_RS13035 PF17941 Polyphosphate kinase C-terminal domain 1 SG48_RS13035 PF13090 Polyphosphate kinase C-terminal domain 2 SG48_RS13040 PF02541 Ppx/GppA phosphatase family SG48_RS13045 PF00563 EAL domain SG48_RS13045 PF05231 MASE1 SG48_RS13055 PF11119 Protein of unknown function (DUF2633) SG48_RS13060 PF05433 Glycine zipper 2TM domain SG48_RS13065 PF17358 Family of unknown function (DUF5384) SG48_RS13070 PF00958 GMP synthase C terminal domain SG48_RS13070 PF02540 NAD synthase SG48_RS13070 PF00117 Glutamine amidotransferase class-I SG48_RS13075 PF00571 CBS domain SG48_RS13075 PF00478 IMP dehydrogenase / GMP reductase domain SG48_RS13080 PF13742 OB-fold nucleic acid binding domain SG48_RS13080 PF02601 Exonuclease VII, large subunit SG48_RS13085 PF07191 zinc-ribbons SG48_RS13090 PF01926 50S ribosome-binding GTPase SG48_RS13090 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SG48_RS13095 PF13360 PQQ-like domain SG48_RS13100 PF09976 Tetratricopeptide repeat-like domain SG48_RS13105 PF03129 Anticodon binding domain SG48_RS13105 PF13393 Histidyl-tRNA synthetase SG48_RS13110 PF04551 GcpE protein SG48_RS13115 PF13464 Domain of unknown function (DUF4115) SG48_RS13120 PF04055 Radical SAM superfamily SG48_RS13125 PF00334 Nucleoside diphosphate kinase SG48_RS13130 PF06832 Penicillin-Binding Protein C-terminus Family SG48_RS13130 PF00905 Penicillin binding protein transpeptidase domain SG48_RS13130 PF00912 Transglycosylase SG48_RS13135 PF07678 A-macroglobulin TED domain SG48_RS13135 PF01835 MG2 domain SG48_RS13135 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain SG48_RS13135 PF17962 Bacterial macroglobulin domain 6 SG48_RS13135 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain SG48_RS13135 PF07703 Alpha-2-macroglobulin bait region domain SG48_RS13135 PF00207 Alpha-2-macroglobulin family SG48_RS13135 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain SG48_RS13135 PF11974 Bacterial alpha-2-macroglobulin MG3 domain SG48_RS13140 PF00581 Rhodanese-like domain SG48_RS13145 PF07179 SseB protein N-terminal domain SG48_RS13145 PF14581 SseB protein C-terminal domain SG48_RS13150 PF12404 Peptidase SG48_RS13150 PF00883 Cytosol aminopeptidase family, catalytic domain SG48_RS13155 PF04384 Iron-sulphur cluster assembly SG48_RS13160 PF00111 2Fe-2S iron-sulfur cluster binding domain SG48_RS13165 PF00012 Hsp70 protein SG48_RS13170 PF07743 HSCB C-terminal oligomerisation domain SG48_RS13175 PF01521 Iron-sulphur cluster biosynthesis SG48_RS13180 PF01592 NifU-like N terminal domain SG48_RS13185 PF00266 Aminotransferase class-V SG48_RS13190 PF02082 Transcriptional regulator SG48_RS13195 PF00588 SpoU rRNA Methylase family SG48_RS13200 PF00459 Inositol monophosphatase family SG48_RS13205 PF12146 Serine aminopeptidase, S33 SG48_RS13210 PF00874 PRD domain SG48_RS13215 PF12832 MFS_1 like family SG48_RS13220 PF03466 LysR substrate binding domain SG48_RS13220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS13225 PF00355 Rieske [2Fe-2S] domain SG48_RS13225 PF00848 Ring hydroxylating alpha subunit (catalytic domain) SG48_RS13230 PF00866 Ring hydroxylating beta subunit SG48_RS13235 PF00355 Rieske [2Fe-2S] domain SG48_RS13240 PF00106 short chain dehydrogenase SG48_RS13245 PF07992 Pyridine nucleotide-disulphide oxidoreductase SG48_RS13245 PF14759 Reductase C-terminal SG48_RS13250 PF07681 DoxX SG48_RS13255 PF01263 Aldose 1-epimerase SG48_RS13260 PF00107 Zinc-binding dehydrogenase SG48_RS13260 PF08240 Alcohol dehydrogenase GroES-like domain SG48_RS13265 PF02653 Branched-chain amino acid transport system / permease component SG48_RS13270 PF00005 ABC transporter SG48_RS13275 PF13407 Periplasmic binding protein domain SG48_RS13280 PF17128 Domain of unknown function (DUF5107) SG48_RS13280 PF13181 Tetratricopeptide repeat SG48_RS13285 PF00480 ROK family SG48_RS13290 PF00464 Serine hydroxymethyltransferase SG48_RS13295 PF00042 Globin SG48_RS13295 PF00175 Oxidoreductase NAD-binding domain SG48_RS13295 PF00970 Oxidoreductase FAD-binding domain SG48_RS13300 PF00543 Nitrogen regulatory protein P-II SG48_RS13305 PF00158 Sigma-54 interaction domain SG48_RS13305 PF00072 Response regulator receiver domain SG48_RS13310 PF13942 YfhG lipoprotein SG48_RS13315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS13315 PF00512 His Kinase A (phospho-acceptor) domain SG48_RS13320 PF02769 AIR synthase related protein, C-terminal domain SG48_RS13320 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SG48_RS13320 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal SG48_RS13325 PF00497 Bacterial extracellular solute-binding proteins, family 3 SG48_RS13325 PF01464 Transglycosylase SLT domain SG48_RS13330 PF14437 MafB19-like deaminase SG48_RS13340 PF01418 Helix-turn-helix domain, rpiR family SG48_RS13340 PF01380 SIS domain SG48_RS13345 PF12838 4Fe-4S dicluster domain SG48_RS13365 PF01648 4'-phosphopantetheinyl transferase superfamily SG48_RS13370 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ SG48_RS13375 PF02565 Recombination protein O C terminal SG48_RS13375 PF11967 Recombination protein O N terminal SG48_RS13380 PF07650 KH domain SG48_RS13380 PF01926 50S ribosome-binding GTPase SG48_RS13385 PF14622 Ribonuclease-III-like SG48_RS13385 PF00035 Double-stranded RNA binding motif SG48_RS13390 PF10502 Signal peptidase, peptidase S26 SG48_RS13395 PF06421 GTP-binding protein LepA C-terminus SG48_RS13395 PF03144 Elongation factor Tu domain 2 SG48_RS13395 PF00679 Elongation factor G C-terminus SG48_RS13395 PF00009 Elongation factor Tu GTP binding domain SG48_RS13405 PF03888 MucB/RseB N-terminal domain SG48_RS13405 PF17188 MucB/RseB C-terminal domain SG48_RS13410 PF03873 Anti sigma-E protein RseA, C-terminal domain SG48_RS13410 PF03872 Anti sigma-E protein RseA, N-terminal domain SG48_RS13415 PF08281 Sigma-70, region 4 SG48_RS13415 PF04542 Sigma-70 region 2 SG48_RS13425 PF02910 Fumarate reductase flavoprotein C-term SG48_RS13425 PF00890 FAD binding domain SG48_RS13430 PF05175 Methyltransferase small domain SG48_RS13435 PF00270 DEAD/DEAH box helicase SG48_RS13435 PF00271 Helicase conserved C-terminal domain SG48_RS13445 PF03466 LysR substrate binding domain SG48_RS13445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS13450 PF01810 LysE type translocator SG48_RS13455 PF01228 Glycine radical SG48_RS13460 PF03167 Uracil DNA glycosylase superfamily SG48_RS13465 PF00588 SpoU rRNA Methylase family SG48_RS13465 PF08032 RNA 2'-O ribose methyltransferase substrate binding SG48_RS13475 PF00085 Thioredoxin SG48_RS13480 PF03942 DTW domain SG48_RS13485 PF13607 Succinyl-CoA ligase like flavodoxin domain SG48_RS13485 PF00583 Acetyltransferase (GNAT) family SG48_RS13485 PF13380 CoA binding domain SG48_RS13490 PF13091 PLD-like domain SG48_RS13495 PF10043 Predicted periplasmic lipoprotein (DUF2279) SG48_RS13500 PF00083 Sugar (and other) transporter SG48_RS13530 PF10431 C-terminal, D2-small domain, of ClpB protein SG48_RS13530 PF17871 AAA lid domain SG48_RS13530 PF07724 AAA domain (Cdc48 subfamily) SG48_RS13530 PF00004 ATPase family associated with various cellular activities (AAA) SG48_RS13530 PF02861 Clp amino terminal domain, pathogenicity island component SG48_RS13535 PF02578 Multi-copper polyphenol oxidoreductase laccase SG48_RS13540 PF01479 S4 domain SG48_RS13540 PF00849 RNA pseudouridylate synthase SG48_RS13545 PF13525 Outer membrane lipoprotein SG48_RS13555 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SG48_RS13560 PF01817 Chorismate mutase type II SG48_RS13560 PF00800 Prephenate dehydratase SG48_RS13565 PF02153 Prephenate dehydrogenase SG48_RS13565 PF01817 Chorismate mutase type II SG48_RS13570 PF00793 DAHP synthetase I family SG48_RS13575 PF10973 Protein of unknown function (DUF2799) SG48_RS13580 PF13689 YfiR/HmsC-like SG48_RS13585 PF17152 Periplasmic sensor domain SG48_RS13585 PF00990 Diguanylate cyclase, GGDEF domain SG48_RS13590 PF00691 OmpA family SG48_RS13595 PF01245 Ribosomal protein L19 SG48_RS13600 PF01746 tRNA (Guanine-1)-methyltransferase SG48_RS13605 PF01782 RimM N-terminal domain SG48_RS13605 PF05239 PRC-barrel domain SG48_RS13610 PF00886 Ribosomal protein S16 SG48_RS13615 PF02978 Signal peptide binding domain SG48_RS13615 PF02881 SRP54-type protein, helical bundle domain SG48_RS13615 PF00448 SRP54-type protein, GTPase domain SG48_RS13620 PF01578 Cytochrome C assembly protein SG48_RS13625 PF00571 CBS domain SG48_RS13625 PF03471 Transporter associated domain SG48_RS13625 PF01595 Cyclin M transmembrane N-terminal domain SG48_RS13630 PF01025 GrpE SG48_RS13640 PF01513 ATP-NAD kinase SG48_RS13645 PF02463 RecF/RecN/SMC N terminal domain SG48_RS13650 PF04355 SmpA / OmlA family SG48_RS13655 PF03658 RnfH family Ubiquitin SG48_RS13660 PF03364 Polyketide cyclase / dehydrase and lipid transport SG48_RS13665 PF01668 SmpB protein SG48_RS13670 PF13356 Arm DNA-binding domain SG48_RS13670 PF00589 Phage integrase family SG48_RS13680 PF05930 Prophage CP4-57 regulatory protein (AlpA) SG48_RS13685 PF13148 Protein of unknown function (DUF3987) SG48_RS13695 PF00271 Helicase conserved C-terminal domain SG48_RS13700 PF14130 Domain of unknown function (DUF4297) SG48_RS13700 PF08878 Domain of unknown function (DUF1837) SG48_RS13705 PF07510 Protein of unknown function (DUF1524) SG48_RS13710 PF15935 RNase LS, bacterial toxin SG48_RS13715 PF15933 Antitoxin to bacterial toxin RNase LS or RnlA SG48_RS13720 PF01926 50S ribosome-binding GTPase SG48_RS13725 PF06067 Domain of unknown function (DUF932) SG48_RS13730 PF08220 DeoR-like helix-turn-helix domain SG48_RS13730 PF13280 WYL domain SG48_RS13765 PF03230 Antirestriction protein SG48_RS13770 PF04002 RadC-like JAB domain SG48_RS13775 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A SG48_RS13780 PF06755 CbtA_toxin of type IV toxin-antitoxin system SG48_RS13785 PF03797 Autotransporter beta-domain SG48_RS13785 PF03212 Pertactin SG48_RS13785 PF16168 Adhesin of bacterial autotransporter system, probable stalk SG48_RS13800 PF17621 Family of unknown function (DUF5508) SG48_RS13805 PF17612 Family of unknown function (DUF5507) SG48_RS13820 PF00128 Alpha amylase, catalytic domain SG48_RS13825 PF00128 Alpha amylase, catalytic domain SG48_RS13830 PF00128 Alpha amylase, catalytic domain SG48_RS13835 PF08943 CsiD SG48_RS13840 PF01266 FAD dependent oxidoreductase SG48_RS13845 PF00171 Aldehyde dehydrogenase family SG48_RS13850 PF00202 Aminotransferase class-III SG48_RS13855 PF00324 Amino acid permease SG48_RS13860 PF07729 FCD domain SG48_RS13860 PF00392 Bacterial regulatory proteins, gntR family SG48_RS13865 PF01476 LysM domain SG48_RS13865 PF04972 BON domain SG48_RS13870 PF01679 Proteolipid membrane potential modulator SG48_RS13875 PF01022 Bacterial regulatory protein, arsR family SG48_RS13880 PF11127 Protein of unknown function (DUF2892) SG48_RS13880 PF00581 Rhodanese-like domain SG48_RS13885 PF00816 H-NS histone family SG48_RS13890 PF06610 L-alanine exporter SG48_RS13895 PF09400 Protein of unknown function (DUF2002) SG48_RS13900 PF05957 Bacterial protein of unknown function (DUF883) SG48_RS13905 PF00462 Glutaredoxin SG48_RS13910 PF07972 NrdI Flavodoxin like SG48_RS13915 PF02867 Ribonucleotide reductase, barrel domain SG48_RS13915 PF00317 Ribonucleotide reductase, all-alpha domain SG48_RS13915 PF08343 Ribonucleotide reductase N-terminal SG48_RS13920 PF00268 Ribonucleotide reductase, small chain SG48_RS13925 PF00005 ABC transporter SG48_RS13925 PF00571 CBS domain SG48_RS13930 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS13935 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SG48_RS13945 PF03591 AzlC protein SG48_RS13950 PF05437 Branched-chain amino acid transport protein (AzlD) SG48_RS13955 PF01047 MarR family SG48_RS13960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SG48_RS13960 PF00529 HlyD membrane-fusion protein of T1SS SG48_RS13965 PF07690 Major Facilitator Superfamily SG48_RS13970 PF02664 S-Ribosylhomocysteinase (LuxS) SG48_RS13975 PF04262 Glutamate-cysteine ligase SG48_RS13980 PF09335 SNARE associated Golgi protein SG48_RS13985 PF13419 Haloacid dehalogenase-like hydrolase SG48_RS14020 PF02599 Global regulator protein family SG48_RS14025 PF02272 DHHA1 domain SG48_RS14025 PF01411 tRNA synthetases class II (A) SG48_RS14025 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SG48_RS14035 PF02631 RecX family SG48_RS14040 PF00154 recA bacterial DNA recombination protein SG48_RS14045 PF02464 Competence-damaged protein SG48_RS14050 PF13406 Transglycosylase SLT domain SG48_RS14055 PF03608 PTS system enzyme II sorbitol-specific factor SG48_RS14060 PF03612 Sorbitol phosphotransferase enzyme II N-terminus SG48_RS14060 PF07663 Sorbitol phosphotransferase enzyme II C-terminus SG48_RS14065 PF03829 PTS system glucitol/sorbitol-specific IIA component SG48_RS14070 PF00106 short chain dehydrogenase SG48_RS14075 PF06923 Glucitol operon activator protein (GutM) SG48_RS14080 PF00455 DeoR C terminal sensor domain SG48_RS14080 PF08220 DeoR-like helix-turn-helix domain SG48_RS14085 PF00571 CBS domain SG48_RS14085 PF01380 SIS domain SG48_RS14090 PF01590 GAF domain SG48_RS14090 PF00158 Sigma-54 interaction domain SG48_RS14095 PF00301 Rubredoxin SG48_RS14095 PF00258 Flavodoxin SG48_RS14095 PF00753 Metallo-beta-lactamase superfamily SG48_RS14100 PF07992 Pyridine nucleotide-disulphide oxidoreductase SG48_RS14100 PF18113 Rubredoxin binding C-terminal domain SG48_RS14105 PF01300 Telomere recombination SG48_RS14105 PF07503 HypF finger SG48_RS14105 PF17788 HypF Kae1-like domain SG48_RS14105 PF00708 Acylphosphatase SG48_RS14110 PF12800 4Fe-4S binding domain SG48_RS14110 PF13247 4Fe-4S dicluster domain SG48_RS14115 PF00356 Bacterial regulatory proteins, lacI family SG48_RS14120 PF02378 Phosphotransferase system, EIIC SG48_RS14120 PF00367 phosphotransferase system, EIIB SG48_RS14125 PF00232 Glycosyl hydrolase family 1 SG48_RS14130 PF01750 Hydrogenase maturation protease SG48_RS14135 PF07450 Formate hydrogenlyase maturation protein HycH SG48_RS14140 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SG48_RS14145 PF12838 4Fe-4S dicluster domain SG48_RS14150 PF00374 Nickel-dependent hydrogenase SG48_RS14150 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SG48_RS14150 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SG48_RS14155 PF00146 NADH dehydrogenase SG48_RS14160 PF00361 Proton-conducting membrane transporter SG48_RS14165 PF13247 4Fe-4S dicluster domain SG48_RS14175 PF11046 Transcriptional repressor of hyc and hyp operons SG48_RS14180 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA SG48_RS14185 PF02492 CobW/HypB/UreG, nucleotide-binding domain SG48_RS14190 PF01455 HupF/HypC family SG48_RS14195 PF01924 Hydrogenase formation hypA family SG48_RS14200 PF00586 AIR synthase related protein, N-terminal domain SG48_RS14200 PF02769 AIR synthase related protein, C-terminal domain SG48_RS14205 PF00158 Sigma-54 interaction domain SG48_RS14205 PF01590 GAF domain SG48_RS14210 PF11756 Nitrous oxide-stimulated promoter SG48_RS14215 PF05188 MutS domain II SG48_RS14215 PF01624 MutS domain I SG48_RS14215 PF05192 MutS domain III SG48_RS14215 PF05190 MutS family domain IV SG48_RS14215 PF00488 MutS domain V SG48_RS14220 PF00149 Calcineurin-like phosphoesterase SG48_RS14225 PF08220 DeoR-like helix-turn-helix domain SG48_RS14225 PF00455 DeoR C terminal sensor domain SG48_RS14230 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SG48_RS14230 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SG48_RS14235 PF07005 Sugar-binding N-terminal domain SG48_RS14235 PF17042 Nucleotide-binding C-terminal domain SG48_RS14240 PF00596 Class II Aldolase and Adducin N-terminal domain SG48_RS14245 PF01261 Xylose isomerase-like TIM barrel SG48_RS14250 PF02447 GntP family permease SG48_RS14255 PF04545 Sigma-70, region 4 SG48_RS14255 PF04539 Sigma-70 region 3 SG48_RS14255 PF04542 Sigma-70 region 2 SG48_RS14255 PF00140 Sigma-70 factor, region 1.2 SG48_RS14260 PF01551 Peptidase family M23 SG48_RS14260 PF01476 LysM domain SG48_RS14270 PF01975 Survival protein SurE SG48_RS14275 PF01142 tRNA pseudouridine synthase D (TruD) SG48_RS14280 PF02542 YgbB family SG48_RS14285 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SG48_RS14290 PF04977 Septum formation initiator SG48_RS14295 PF12084 Protein of unknown function (DUF3561) SG48_RS14305 PF00009 Elongation factor Tu GTP binding domain SG48_RS14310 PF01507 Phosphoadenosine phosphosulfate reductase family SG48_RS14315 PF04389 Peptidase family M28 SG48_RS14320 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) SG48_RS14325 PF01867 CRISPR associated protein Cas1 SG48_RS14330 PF08798 CRISPR associated protein SG48_RS14335 PF09704 CRISPR-associated protein (Cas_Cas5) SG48_RS14340 PF09344 CT1975-like protein SG48_RS14345 PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) SG48_RS14350 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) SG48_RS14355 PF00270 DEAD/DEAH box helicase SG48_RS14355 PF18019 HD domain SG48_RS14355 PF00271 Helicase conserved C-terminal domain SG48_RS14360 PF01507 Phosphoadenosine phosphosulfate reductase family SG48_RS14365 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SG48_RS14365 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SG48_RS14370 PF00175 Oxidoreductase NAD-binding domain SG48_RS14370 PF00258 Flavodoxin SG48_RS14370 PF00667 FAD binding domain SG48_RS14375 PF01242 6-pyruvoyl tetrahydropterin synthase SG48_RS14380 PF01266 FAD dependent oxidoreductase SG48_RS14390 PF04309 Glycerol-3-phosphate responsive antiterminator SG48_RS14395 PF01012 Electron transfer flavoprotein domain SG48_RS14395 PF00766 Electron transfer flavoprotein FAD-binding domain SG48_RS14400 PF01012 Electron transfer flavoprotein domain SG48_RS14405 PF00083 Sugar (and other) transporter SG48_RS14410 PF01565 FAD binding domain SG48_RS14410 PF02913 FAD linked oxidases, C-terminal domain SG48_RS14420 PF07690 Major Facilitator Superfamily SG48_RS14425 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SG48_RS14425 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SG48_RS14430 PF04055 Radical SAM superfamily SG48_RS14440 PF04536 TPM domain SG48_RS14445 PF00113 Enolase, C-terminal TIM barrel domain SG48_RS14445 PF03952 Enolase, N-terminal domain SG48_RS14450 PF06418 CTP synthase N-terminus SG48_RS14450 PF00117 Glutamine amidotransferase class-I SG48_RS14455 PF03819 MazG nucleotide pyrophosphohydrolase domain SG48_RS14460 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system SG48_RS14465 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin SG48_RS14470 PF04607 Region found in RelA / SpoT proteins SG48_RS14470 PF02824 TGS domain SG48_RS14470 PF13291 ACT domain SG48_RS14475 PF05958 tRNA (Uracil-5-)-methyltransferase SG48_RS14475 PF01938 TRAM domain SG48_RS14480 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SG48_RS14480 PF00512 His Kinase A (phospho-acceptor) domain SG48_RS14480 PF01627 Hpt domain SG48_RS14480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS14480 PF00672 HAMP domain SG48_RS14480 PF00072 Response regulator receiver domain SG48_RS14485 PF13378 Enolase C-terminal domain-like SG48_RS14490 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SG48_RS14490 PF13378 Enolase C-terminal domain-like SG48_RS14495 PF07690 Major Facilitator Superfamily SG48_RS14500 PF00258 Flavodoxin SG48_RS14505 PF00849 RNA pseudouridylate synthase SG48_RS14510 PF04287 tRNA pseudouridine synthase C SG48_RS14520 PF07348 Syd protein (SUKH-2) SG48_RS14525 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term SG48_RS14525 PF14489 QueF-like protein SG48_RS14530 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases SG48_RS14530 PF03641 Possible lysine decarboxylase SG48_RS14530 PF11892 Domain of unknown function (DUF3412) SG48_RS14540 PF03315 Serine dehydratase beta chain SG48_RS14540 PF03313 Serine dehydratase alpha chain SG48_RS14545 PF01367 5'-3' exonuclease, C-terminal SAM fold SG48_RS14545 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SG48_RS14550 PF00465 Iron-containing alcohol dehydrogenase SG48_RS14555 PF00596 Class II Aldolase and Adducin N-terminal domain SG48_RS14560 PF07690 Major Facilitator Superfamily SG48_RS14565 PF07882 L-fucose isomerase, second N-terminal domain SG48_RS14565 PF02952 L-fucose isomerase, C-terminal domain SG48_RS14565 PF07881 L-fucose isomerase, first N-terminal domain SG48_RS14570 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SG48_RS14570 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SG48_RS14575 PF05025 RbsD / FucU transport protein family SG48_RS14580 PF00455 DeoR C terminal sensor domain SG48_RS14580 PF08220 DeoR-like helix-turn-helix domain SG48_RS14585 PF01728 FtsJ-like methyltransferase SG48_RS14585 PF18125 RlmM ferredoxin-like domain SG48_RS14590 PF04241 Protein of unknown function (DUF423) SG48_RS14595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS14595 PF03466 LysR substrate binding domain SG48_RS14600 PF06004 Bacterial protein of unknown function (DUF903) SG48_RS14605 PF00266 Aminotransferase class-V SG48_RS14610 PF02657 Fe-S metabolism associated domain SG48_RS14615 PF00899 ThiF family SG48_RS14620 PF03562 MltA specific insert domain SG48_RS14620 PF06725 3D domain SG48_RS14640 PF11741 AMIN domain SG48_RS14640 PF01520 N-acetylmuramoyl-L-alanine amidase SG48_RS14645 PF00696 Amino acid kinase family SG48_RS14645 PF00583 Acetyltransferase (GNAT) family SG48_RS14650 PF13538 UvrD-like helicase C-terminal domain SG48_RS14655 PF00580 UvrD/REP helicase N-terminal domain SG48_RS14655 PF12705 PD-(D/E)XK nuclease superfamily SG48_RS14655 PF13361 UvrD-like helicase C-terminal domain SG48_RS14660 PF00675 Insulinase (Peptidase family M16) SG48_RS14660 PF05193 Peptidase M16 inactive domain SG48_RS14660 PF16187 Middle or third domain of peptidase_M16 SG48_RS14665 PF17946 RecC C-terminal domain SG48_RS14670 PF12528 Type II secretion prepilin peptidase dependent protein C SG48_RS14670 PF07963 Prokaryotic N-terminal methylation motif SG48_RS14675 PF10713 Protein of unknown function (DUF2509) SG48_RS14680 PF07963 Prokaryotic N-terminal methylation motif SG48_RS14685 PF07963 Prokaryotic N-terminal methylation motif SG48_RS14690 PF00303 Thymidylate synthase SG48_RS14695 PF01790 Prolipoprotein diacylglyceryl transferase SG48_RS14700 PF01590 GAF domain SG48_RS14700 PF05524 PEP-utilising enzyme, N-terminal SG48_RS14700 PF00391 PEP-utilising enzyme, mobile domain SG48_RS14700 PF02896 PEP-utilising enzyme, TIM barrel domain SG48_RS14705 PF00293 NUDIX domain SG48_RS14720 PF02976 DNA mismatch repair enzyme MutH SG48_RS14725 PF03741 Integral membrane protein TerC family SG48_RS14730 PF06004 Bacterial protein of unknown function (DUF903) SG48_RS14735 PF00248 Aldo/keto reductase family SG48_RS14740 PF07690 Major Facilitator Superfamily SG48_RS14745 PF00501 AMP-binding enzyme SG48_RS14745 PF01553 Acyltransferase SG48_RS14750 PF00356 Bacterial regulatory proteins, lacI family SG48_RS14755 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SG48_RS14755 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SG48_RS14760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS14760 PF03466 LysR substrate binding domain SG48_RS14765 PF01177 Asp/Glu/Hydantoin racemase SG48_RS14770 PF00083 Sugar (and other) transporter SG48_RS14780 PF04962 KduI/IolB family SG48_RS14785 PF02803 Thiolase, C-terminal domain SG48_RS14785 PF00108 Thiolase, N-terminal domain SG48_RS14790 PF03222 Tryptophan/tyrosine permease family SG48_RS14795 PF00196 Bacterial regulatory proteins, luxR family SG48_RS14800 PF00486 Transcriptional regulatory protein, C terminal SG48_RS14820 PF07720 Tetratricopeptide repeat SG48_RS14825 PF00486 Transcriptional regulatory protein, C terminal SG48_RS14835 PF01464 Transglycosylase SLT domain SG48_RS14840 PF00072 Response regulator receiver domain SG48_RS14840 PF00196 Bacterial regulatory proteins, luxR family SG48_RS14845 PF00196 Bacterial regulatory proteins, luxR family SG48_RS14845 PF00072 Response regulator receiver domain SG48_RS14860 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) SG48_RS14865 PF00665 Integrase core domain SG48_RS14865 PF13276 HTH-like domain SG48_RS14870 PF01527 Transposase SG48_RS14890 PF01476 LysM domain SG48_RS14890 PF01551 Peptidase family M23 SG48_RS14895 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase SG48_RS14895 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain SG48_RS14900 PF00941 FAD binding domain in molybdopterin dehydrogenase SG48_RS14900 PF03450 CO dehydrogenase flavoprotein C-terminal domain SG48_RS14905 PF01799 [2Fe-2S] binding domain SG48_RS14905 PF00111 2Fe-2S iron-sulfur cluster binding domain SG48_RS14910 PF00158 Sigma-54 interaction domain SG48_RS14910 PF13188 PAS domain SG48_RS14910 PF02954 Bacterial regulatory protein, Fis family SG48_RS14915 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SG48_RS14915 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SG48_RS14920 PF00291 Pyridoxal-phosphate dependent enzyme SG48_RS14925 PF01546 Peptidase family M20/M25/M40 SG48_RS14925 PF07687 Peptidase dimerisation domain SG48_RS14930 PF01979 Amidohydrolase family SG48_RS14935 PF00696 Amino acid kinase family SG48_RS14940 PF13478 XdhC Rossmann domain SG48_RS14940 PF02625 XdhC and CoxI family SG48_RS14950 PF12804 MobA-like NTP transferase domain SG48_RS14955 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SG48_RS14955 PF07992 Pyridine nucleotide-disulphide oxidoreductase SG48_RS14960 PF01979 Amidohydrolase family SG48_RS14965 PF00941 FAD binding domain in molybdopterin dehydrogenase SG48_RS14970 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain SG48_RS14970 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase SG48_RS14970 PF01799 [2Fe-2S] binding domain SG48_RS14975 PF00860 Permease family SG48_RS14980 PF01979 Amidohydrolase family SG48_RS14985 PF00860 Permease family SG48_RS14990 PF13247 4Fe-4S dicluster domain SG48_RS14995 PF07992 Pyridine nucleotide-disulphide oxidoreductase SG48_RS14995 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SG48_RS14995 PF13247 4Fe-4S dicluster domain SG48_RS15005 PF00860 Permease family SG48_RS15015 PF00293 NUDIX domain SG48_RS15020 PF00152 tRNA synthetases class II (D, K and N) SG48_RS15020 PF01336 OB-fold nucleic acid binding domain SG48_RS15025 PF03462 PCRF domain SG48_RS15025 PF00472 RF-1 domain SG48_RS15030 PF17768 RecJ OB domain SG48_RS15030 PF02272 DHHA1 domain SG48_RS15030 PF01368 DHH family SG48_RS15035 PF13098 Thioredoxin-like domain SG48_RS15035 PF10411 Disulfide bond isomerase protein N-terminus SG48_RS15040 PF00589 Phage integrase family SG48_RS15040 PF02899 Phage integrase, N-terminal SAM-like domain SG48_RS15045 PF00258 Flavodoxin SG48_RS15050 PF07254 Membrane-bound toxin component of toxin-antitoxin system SG48_RS15055 PF03937 Flavinator of succinate dehydrogenase SG48_RS15060 PF01571 Aminomethyltransferase folate-binding domain SG48_RS15065 PF03006 Haemolysin-III related SG48_RS15070 PF04266 ASCH domain SG48_RS15075 PF00232 Glycosyl hydrolase family 1 SG48_RS15085 PF02347 Glycine cleavage system P-protein SG48_RS15090 PF01597 Glycine cleavage H-protein SG48_RS15095 PF08669 Glycine cleavage T-protein C-terminal barrel domain SG48_RS15095 PF01571 Aminomethyltransferase folate-binding domain SG48_RS15100 PF01494 FAD binding domain SG48_RS15105 PF01494 FAD binding domain SG48_RS15110 PF05195 Aminopeptidase P, N-terminal domain SG48_RS15110 PF00557 Metallopeptidase family M24 SG48_RS15115 PF03695 Uncharacterised protein family (UPF0149) SG48_RS15120 PF05164 Cell division protein ZapA SG48_RS15125 PF01812 5-formyltetrahydrofolate cyclo-ligase family SG48_RS15130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SG48_RS15130 PF01842 ACT domain SG48_RS15130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SG48_RS15135 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SG48_RS15140 PF03466 LysR substrate binding domain SG48_RS15145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS15145 PF03466 LysR substrate binding domain SG48_RS15150 PF02310 B12 binding domain SG48_RS15150 PF01642 Methylmalonyl-CoA mutase SG48_RS15160 PF00378 Enoyl-CoA hydratase/isomerase SG48_RS15165 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain SG48_RS15165 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain SG48_RS15170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS15170 PF03466 LysR substrate binding domain SG48_RS15175 PF04402 Protein of unknown function (DUF541) SG48_RS15180 PF01810 LysE type translocator SG48_RS15185 PF00924 Mechanosensitive ion channel SG48_RS15185 PF05552 Conserved TM helix SG48_RS15190 PF01116 Fructose-bisphosphate aldolase class-II SG48_RS15195 PF00162 Phosphoglycerate kinase SG48_RS15200 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SG48_RS15200 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SG48_RS15210 PF05068 Mannitol repressor SG48_RS15215 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded SG48_RS15220 PF08240 Alcohol dehydrogenase GroES-like domain SG48_RS15220 PF00107 Zinc-binding dehydrogenase SG48_RS15225 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SG48_RS15225 PF02378 Phosphotransferase system, EIIC SG48_RS15230 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SG48_RS15235 PF00456 Transketolase, thiamine diphosphate binding domain SG48_RS15235 PF02779 Transketolase, pyrimidine binding domain SG48_RS15235 PF02780 Transketolase, C-terminal domain SG48_RS15240 PF01435 Peptidase family M48 SG48_RS15245 PF00491 Arginase family SG48_RS15250 PF17944 Arginine decarboxylase C-terminal helical extension SG48_RS15250 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SG48_RS15250 PF17810 Arginine decarboxylase helical bundle domain SG48_RS15255 PF11036 Virulence promoting factor SG48_RS15260 PF17430 Uncharacterized YqgC-like SG48_RS15270 PF02772 S-adenosylmethionine synthetase, central domain SG48_RS15270 PF00438 S-adenosylmethionine synthetase, N-terminal domain SG48_RS15270 PF02773 S-adenosylmethionine synthetase, C-terminal domain SG48_RS15275 PF00083 Sugar (and other) transporter SG48_RS15280 PF10263 SprT-like family SG48_RS15280 PF17283 SprT-like zinc ribbon domain SG48_RS15285 PF04231 Endonuclease I SG48_RS15290 PF04452 RNA methyltransferase SG48_RS15295 PF02951 Prokaryotic glutathione synthetase, N-terminal domain SG48_RS15295 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain SG48_RS15300 PF02622 Uncharacterized ACR, COG1678 SG48_RS15305 PF03652 Holliday junction resolvase SG48_RS15310 PF00437 Type II/IV secretion system protein SG48_RS15315 PF01168 Alanine racemase, N-terminal domain SG48_RS15320 PF02325 YGGT family SG48_RS15325 PF02594 Uncharacterised ACR, YggU family COG1872 SG48_RS15330 PF01725 Ham1 family SG48_RS15335 PF06969 HemN C-terminal domain SG48_RS15335 PF04055 Radical SAM superfamily SG48_RS15340 PF06717 Protein of unknown function (DUF1202) SG48_RS15345 PF00710 Asparaginase, N-terminal SG48_RS15345 PF17763 Glutaminase/Asparaginase C-terminal domain SG48_RS15350 PF11101 Protein of unknown function (DUF2884) SG48_RS15360 PF04320 Protein with unknown function (DUF469) SG48_RS15365 PF02390 Putative methyltransferase SG48_RS15370 PF00730 HhH-GPD superfamily base excision DNA repair protein SG48_RS15370 PF00633 Helix-hairpin-helix motif SG48_RS15370 PF10576 Iron-sulfur binding domain of endonuclease III SG48_RS15370 PF14815 NUDIX domain SG48_RS15375 PF04362 Bacterial Fe(2+) trafficking SG48_RS15380 PF01464 Transglycosylase SLT domain SG48_RS15380 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain SG48_RS15385 PF03825 Nucleoside H+ symporter SG48_RS15390 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain SG48_RS15390 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SG48_RS15390 PF01276 Orn/Lys/Arg decarboxylase, major domain SG48_RS15395 PF04474 Protein of unknown function (DUF554) SG48_RS15405 PF04612 Type II secretion system (T2SS), protein M SG48_RS15410 PF12693 GspL periplasmic domain SG48_RS15415 PF11356 Type II secretion system protein C SG48_RS15420 PF16549 Type II secretion system (T2SS) pilotin, S protein SG48_RS15425 PF01478 Type IV leader peptidase family SG48_RS15425 PF06750 Bacterial Peptidase A24 N-terminal domain SG48_RS15430 PF13322 Domain of unknown function (DUF4092) SG48_RS15430 PF17291 N-terminal domain of M60-like peptidases SG48_RS15430 PF13402 Peptidase M60, enhancin and enhancin-like SG48_RS15440 PF02652 L-lactate permease SG48_RS15445 PF01274 Malate synthase SG48_RS15450 PF03928 Haem-degrading SG48_RS15455 PF13183 4Fe-4S dicluster domain SG48_RS15455 PF02754 Cysteine-rich domain SG48_RS15460 PF01565 FAD binding domain SG48_RS15465 PF01565 FAD binding domain SG48_RS15465 PF02913 FAD linked oxidases, C-terminal domain SG48_RS15470 PF00392 Bacterial regulatory proteins, gntR family SG48_RS15470 PF07729 FCD domain SG48_RS15480 PF01609 Transposase DDE domain SG48_RS15480 PF05598 Transposase domain (DUF772) SG48_RS15485 PF01943 Polysaccharide biosynthesis protein SG48_RS15505 PF01384 Phosphate transporter family SG48_RS15510 PF05257 CHAP domain SG48_RS15510 PF03738 Glutathionylspermidine synthase preATP-grasp SG48_RS15515 PF02798 Glutathione S-transferase, N-terminal domain SG48_RS15520 PF01455 HupF/HypC family SG48_RS15525 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA SG48_RS15530 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE SG48_RS15535 PF01750 Hydrogenase maturation protease SG48_RS15540 PF00374 Nickel-dependent hydrogenase SG48_RS15545 PF03916 Polysulphide reductase, NrfD SG48_RS15550 PF13247 4Fe-4S dicluster domain SG48_RS15555 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal SG48_RS15555 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SG48_RS15565 PF11115 Protein of unknown function (DUF2623) SG48_RS15575 PF00248 Aldo/keto reductase family SG48_RS15580 PF03350 Uncharacterized protein family, UPF0114 SG48_RS15590 PF02472 Biopolymer transport protein ExbD/TolR SG48_RS15595 PF01618 MotA/TolQ/ExbB proton channel family SG48_RS15605 PF01053 Cys/Met metabolism PLP-dependent enzyme SG48_RS15610 PF09335 SNARE associated Golgi protein SG48_RS15615 PF06719 AraC-type transcriptional regulator N-terminus SG48_RS15615 PF12833 Helix-turn-helix domain SG48_RS15625 PF00465 Iron-containing alcohol dehydrogenase SG48_RS15630 PF00248 Aldo/keto reductase family SG48_RS15635 PF12883 Protein of unknown function (DUF3828) SG48_RS15640 PF04728 Lipoprotein leucine-zipper SG48_RS15645 PF04055 Radical SAM superfamily SG48_RS15645 PF08497 Radical SAM N-terminal SG48_RS15645 PF11842 Domain of unknown function (DUF3362) SG48_RS15650 PF00394 Multicopper oxidase SG48_RS15650 PF07731 Multicopper oxidase SG48_RS15650 PF07732 Multicopper oxidase SG48_RS15655 PF01553 Acyltransferase SG48_RS15660 PF00521 DNA gyrase/topoisomerase IV, subunit A SG48_RS15660 PF03989 DNA gyrase C-terminal domain, beta-propeller SG48_RS15665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SG48_RS15670 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA SG48_RS15675 PF15723 Motility quorum-sensing regulator, toxin of MqsA SG48_RS15680 PF06445 GyrI-like small molecule binding domain SG48_RS15685 PF04076 Bacterial OB fold (BOF) protein SG48_RS15690 PF00072 Response regulator receiver domain SG48_RS15690 PF00486 Transcriptional regulatory protein, C terminal SG48_RS15695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS15695 PF08521 Two-component sensor kinase N-terminal SG48_RS15695 PF00512 His Kinase A (phospho-acceptor) domain SG48_RS15700 PF10840 Protein of unknown function (DUF2645) SG48_RS15705 PF02525 Flavodoxin-like fold SG48_RS15710 PF03992 Antibiotic biosynthesis monooxygenase SG48_RS15715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS15715 PF01751 Toprim domain SG48_RS15715 PF00986 DNA gyrase B subunit, carboxyl terminus SG48_RS15715 PF00204 DNA gyrase B SG48_RS15720 PF05728 Uncharacterised protein family (UPF0227) SG48_RS15725 PF00149 Calcineurin-like phosphoesterase SG48_RS15730 PF06853 Protein of unknown function (DUF1249) SG48_RS15735 PF00293 NUDIX domain SG48_RS15740 PF02321 Outer membrane efflux protein SG48_RS15750 PF06693 Protein of unknown function (DUF1190) SG48_RS15755 PF03738 Glutathionylspermidine synthase preATP-grasp SG48_RS15760 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase SG48_RS15765 PF02535 ZIP Zinc transporter SG48_RS15775 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SG48_RS15780 PF04380 Membrane fusogenic activity SG48_RS15785 PF00419 Fimbrial protein SG48_RS15790 PF01527 Transposase SG48_RS15795 PF00665 Integrase core domain SG48_RS15795 PF13276 HTH-like domain SG48_RS15800 PF00577 Outer membrane usher protein SG48_RS15800 PF13954 PapC N-terminal domain SG48_RS15800 PF13953 PapC C-terminal domain SG48_RS15805 PF02753 Pili assembly chaperone PapD, C-terminal domain SG48_RS15805 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SG48_RS15815 PF08971 Glycogen synthesis protein SG48_RS15820 PF07290 Protein of unknown function (DUF1449) SG48_RS15825 PF01145 SPFH domain / Band 7 family SG48_RS15825 PF15975 Flotillin SG48_RS15840 PF00294 pfkB family carbohydrate kinase SG48_RS15840 PF01467 Cytidylyltransferase-like SG48_RS15845 PF08335 GlnD PII-uridylyltransferase SG48_RS15845 PF03710 Glutamate-ammonia ligase adenylyltransferase SG48_RS15850 PF01928 CYTH domain SG48_RS15860 PF08239 Bacterial SH3 domain SG48_RS15865 PF01966 HD domain SG48_RS15865 PF01743 Poly A polymerase head domain SG48_RS15865 PF12627 Probable RNA and SrmB- binding site of polymerase A SG48_RS15870 PF02673 Bacitracin resistance protein BacA SG48_RS15875 PF02152 Dihydroneopterin aldolase SG48_RS15880 PF02660 Glycerol-3-phosphate acyltransferase SG48_RS15885 PF03466 LysR substrate binding domain SG48_RS15885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS15890 PF05681 Fumarate hydratase (Fumerase) SG48_RS15895 PF05683 Fumarase C-terminus SG48_RS15900 PF00939 Sodium:sulfate symporter transmembrane region SG48_RS15905 PF00814 Glycoprotease family SG48_RS15910 PF01165 Ribosomal protein S21 SG48_RS15915 PF10410 DnaB-helicase binding domain of primase SG48_RS15915 PF08278 DNA primase DnaG DnaB-binding SG48_RS15915 PF08275 DNA primase catalytic core, N-terminal domain SG48_RS15915 PF01807 CHC2 zinc finger SG48_RS15920 PF03979 Sigma-70 factor, region 1.1 SG48_RS15920 PF00140 Sigma-70 factor, region 1.2 SG48_RS15920 PF04542 Sigma-70 region 2 SG48_RS15920 PF04539 Sigma-70 region 3 SG48_RS15920 PF04545 Sigma-70, region 4 SG48_RS15920 PF04546 Sigma-70, non-essential region SG48_RS15925 PF03167 Uracil DNA glycosylase superfamily SG48_RS15935 PF08021 Siderophore-interacting FAD-binding domain SG48_RS15935 PF04954 Siderophore-interacting protein SG48_RS15940 PF03551 Transcriptional regulator PadR-like family SG48_RS15945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SG48_RS15945 PF08447 PAS fold SG48_RS15950 PF00202 Aminotransferase class-III SG48_RS15955 PF01588 Putative tRNA binding domain SG48_RS15960 PF00356 Bacterial regulatory proteins, lacI family SG48_RS15965 PF02837 Glycosyl hydrolases family 2, sugar binding domain SG48_RS15965 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SG48_RS15965 PF00703 Glycosyl hydrolases family 2 SG48_RS15965 PF16353 Domain of unknown function(DUF4981) SG48_RS15965 PF02929 Beta galactosidase small chain SG48_RS15970 PF04074 YhcH/YjgK/YiaL SG48_RS15975 PF13520 Amino acid permease SG48_RS15985 PF01204 Trehalase SG48_RS15990 PF07992 Pyridine nucleotide-disulphide oxidoreductase SG48_RS15990 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SG48_RS15995 PF01381 Helix-turn-helix SG48_RS16000 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system SG48_RS16010 PF05175 Methyltransferase small domain SG48_RS16015 PF01863 Protein of unknown function DUF45 SG48_RS16020 PF02698 DUF218 domain SG48_RS16025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SG48_RS16030 PF03741 Integral membrane protein TerC family SG48_RS16035 PF00375 Sodium:dicarboxylate symporter family SG48_RS16040 PF10688 Bacterial inner membrane protein SG48_RS16045 PF08666 SAF domain SG48_RS16045 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus SG48_RS16050 PF02614 Glucuronate isomerase SG48_RS16055 PF07690 Major Facilitator Superfamily SG48_RS16060 PF00392 Bacterial regulatory proteins, gntR family SG48_RS16060 PF07729 FCD domain SG48_RS16065 PF09335 SNARE associated Golgi protein SG48_RS16070 PF13721 SecD export protein N-terminal TM region SG48_RS16075 PF06476 Protein of unknown function (DUF1090) SG48_RS16080 PF05957 Bacterial protein of unknown function (DUF883) SG48_RS16085 PF07332 Putative Actinobacterial Holin-X, holin superfamily III SG48_RS16090 PF13997 YqjK-like protein SG48_RS16095 PF07681 DoxX SG48_RS16100 PF13409 Glutathione S-transferase, N-terminal domain SG48_RS16105 PF05656 Protein of unknown function (DUF805) SG48_RS16110 PF05656 Protein of unknown function (DUF805) SG48_RS16115 PF03466 LysR substrate binding domain SG48_RS16115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS16120 PF17954 Quercetinase C-terminal cupin domain SG48_RS16120 PF02678 Pirin SG48_RS16130 PF03313 Serine dehydratase alpha chain SG48_RS16140 PF03313 Serine dehydratase alpha chain SG48_RS16140 PF03315 Serine dehydratase beta chain SG48_RS16145 PF01042 Endoribonuclease L-PSP SG48_RS16150 PF01228 Glycine radical SG48_RS16150 PF02901 Pyruvate formate lyase-like SG48_RS16155 PF00871 Acetokinase family SG48_RS16160 PF03222 Tryptophan/tyrosine permease family SG48_RS16165 PF00291 Pyridoxal-phosphate dependent enzyme SG48_RS16170 PF03466 LysR substrate binding domain SG48_RS16170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS16190 PF02595 Glycerate kinase family SG48_RS16195 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SG48_RS16195 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SG48_RS16200 PF03328 HpcH/HpaI aldolase/citrate lyase family SG48_RS16205 PF07690 Major Facilitator Superfamily SG48_RS16210 PF08666 SAF domain SG48_RS16210 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus SG48_RS16215 PF15937 prlF antitoxin for toxin YhaV_toxin SG48_RS16220 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system SG48_RS16225 PF08220 DeoR-like helix-turn-helix domain SG48_RS16225 PF00455 DeoR C terminal sensor domain SG48_RS16230 PF08013 Tagatose 6 phosphate kinase SG48_RS16235 PF03830 PTS system sorbose subfamily IIB component SG48_RS16240 PF03609 PTS system sorbose-specific iic component SG48_RS16245 PF01979 Amidohydrolase family SG48_RS16250 PF01380 SIS domain SG48_RS16255 PF01116 Fructose-bisphosphate aldolase class-II SG48_RS16260 PF03830 PTS system sorbose subfamily IIB component SG48_RS16265 PF03609 PTS system sorbose-specific iic component SG48_RS16270 PF03613 PTS system mannose/fructose/sorbose family IID component SG48_RS16275 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SG48_RS16280 PF00419 Fimbrial protein SG48_RS16285 PF02753 Pili assembly chaperone PapD, C-terminal domain SG48_RS16285 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SG48_RS16290 PF00577 Outer membrane usher protein SG48_RS16290 PF13954 PapC N-terminal domain SG48_RS16290 PF13953 PapC C-terminal domain SG48_RS16295 PF00419 Fimbrial protein SG48_RS16300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SG48_RS16305 PF04348 LppC putative lipoprotein SG48_RS16310 PF02021 Uncharacterised protein family UPF0102 SG48_RS16315 PF13580 SIS domain SG48_RS16320 PF04972 BON domain SG48_RS16325 PF03773 Predicted permease SG48_RS16330 PF13460 NAD(P)H-binding SG48_RS16335 PF01965 DJ-1/PfpI family SG48_RS16345 PF01541 GIY-YIG catalytic domain SG48_RS16350 PF13508 Acetyltransferase (GNAT) domain SG48_RS16355 PF02036 SCP-2 sterol transfer family SG48_RS16360 PF01136 Peptidase family U32 SG48_RS16365 PF01136 Peptidase family U32 SG48_RS16370 PF00296 Luciferase-like monooxygenase SG48_RS16375 PF03222 Tryptophan/tyrosine permease family SG48_RS16385 PF00271 Helicase conserved C-terminal domain SG48_RS16385 PF03880 DbpA RNA binding domain SG48_RS16385 PF00270 DEAD/DEAH box helicase SG48_RS16385 PF12343 Cold shock protein DEAD box A SG48_RS16390 PF07719 Tetratricopeptide repeat SG48_RS16390 PF13181 Tetratricopeptide repeat SG48_RS16395 PF01138 3' exoribonuclease family, domain 1 SG48_RS16395 PF03725 3' exoribonuclease family, domain 2 SG48_RS16395 PF00575 S1 RNA binding domain SG48_RS16395 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SG48_RS16395 PF00013 KH domain SG48_RS16400 PF00312 Ribosomal protein S15 SG48_RS16405 PF01509 TruB family pseudouridylate synthase (N terminal domain) SG48_RS16405 PF16198 tRNA pseudouridylate synthase B C-terminal domain SG48_RS16405 PF09157 Pseudouridine synthase II TruB, C-terminal SG48_RS16410 PF02033 Ribosome-binding factor A SG48_RS16415 PF00009 Elongation factor Tu GTP binding domain SG48_RS16415 PF11987 Translation-initiation factor 2 SG48_RS16415 PF08364 Bacterial translation initiation factor IF-2 associated region SG48_RS16415 PF04760 Translation initiation factor IF-2, N-terminal region SG48_RS16420 PF13184 NusA-like KH domain SG48_RS16420 PF00575 S1 RNA binding domain SG48_RS16420 PF08529 NusA N-terminal domain SG48_RS16425 PF17384 RimP C-terminal SH3 domain SG48_RS16425 PF02576 RimP N-terminal domain SG48_RS16435 PF00764 Arginosuccinate synthase SG48_RS16440 PF00884 Sulfatase SG48_RS16450 PF03840 Preprotein translocase SecG subunit SG48_RS16455 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SG48_RS16455 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SG48_RS16455 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SG48_RS16455 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SG48_RS16460 PF00809 Pterin binding enzyme SG48_RS16465 PF00004 ATPase family associated with various cellular activities (AAA) SG48_RS16465 PF17862 AAA+ lid domain SG48_RS16465 PF06480 FtsH Extracellular SG48_RS16465 PF01434 Peptidase family M41 SG48_RS16470 PF01728 FtsJ-like methyltransferase SG48_RS16475 PF01985 CRS1 / YhbY (CRM) domain SG48_RS16480 PF03449 Transcription elongation factor, N-terminal SG48_RS16480 PF01272 Transcription elongation factor, GreA/GreB, C-term SG48_RS16485 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family SG48_RS16490 PF01018 GTP1/OBG SG48_RS16490 PF01926 50S ribosome-binding GTPase SG48_RS16495 PF00892 EamA-like transporter family SG48_RS16500 PF01016 Ribosomal L27 protein SG48_RS16505 PF00829 Ribosomal prokaryotic L21 protein SG48_RS16510 PF00348 Polyprenyl synthetase SG48_RS16515 PF13693 Winged helix-turn-helix DNA-binding SG48_RS16520 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SG48_RS16525 PF01722 BolA-like protein SG48_RS16530 PF13466 STAS domain SG48_RS16535 PF05494 MlaC protein SG48_RS16540 PF02470 MlaD protein SG48_RS16545 PF02405 Permease MlaE SG48_RS16550 PF00005 ABC transporter SG48_RS16555 PF01699 Sodium/calcium exchanger protein SG48_RS16560 PF00571 CBS domain SG48_RS16560 PF01380 SIS domain SG48_RS16570 PF06835 Lipopolysaccharide-assembly, LptC-related SG48_RS16575 PF03968 OstA-like protein SG48_RS16580 PF00005 ABC transporter SG48_RS16580 PF12399 Branched-chain amino acid ATP-binding cassette transporter SG48_RS16585 PF04963 Sigma-54 factor, core binding domain SG48_RS16585 PF04552 Sigma-54, DNA binding domain SG48_RS16585 PF00309 Sigma-54 factor, Activator interacting domain (AID) SG48_RS16590 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SG48_RS16595 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SG48_RS16600 PF03668 P-loop ATPase protein family SG48_RS16605 PF00381 PTS HPr component phosphorylation site SG48_RS16610 PF10707 PhoP regulatory network protein YrbL SG48_RS16615 PF00912 Transglycosylase SG48_RS16625 PF01627 Hpt domain SG48_RS16625 PF18415 Histidine kinase receptor ArcB trans-membrane domain SG48_RS16625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS16625 PF00072 Response regulator receiver domain SG48_RS16625 PF00512 His Kinase A (phospho-acceptor) domain SG48_RS16625 PF00989 PAS fold SG48_RS16630 PF16199 Radical_SAM C-terminal domain SG48_RS16630 PF04055 Radical SAM superfamily SG48_RS16635 PF01493 GXGXG motif SG48_RS16635 PF01645 Conserved region in glutamate synthase SG48_RS16635 PF00310 Glutamine amidotransferases class-II SG48_RS16635 PF04898 Glutamate synthase central domain SG48_RS16640 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SG48_RS16640 PF07992 Pyridine nucleotide-disulphide oxidoreductase SG48_RS16645 PF06551 Protein of unknown function (DUF1120) SG48_RS16650 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SG48_RS16655 PF13953 PapC C-terminal domain SG48_RS16655 PF00577 Outer membrane usher protein SG48_RS16655 PF13954 PapC N-terminal domain SG48_RS16665 PF01609 Transposase DDE domain SG48_RS16665 PF05598 Transposase domain (DUF772) SG48_RS16675 PF06551 Protein of unknown function (DUF1120) SG48_RS16680 PF06250 YhcG PDDEXK nuclease domain SG48_RS16680 PF17761 DUF1016 N-terminal domain SG48_RS16685 PF04074 YhcH/YjgK/YiaL SG48_RS16690 PF00480 ROK family SG48_RS16695 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SG48_RS16700 PF07690 Major Facilitator Superfamily SG48_RS16705 PF00701 Dihydrodipicolinate synthetase family SG48_RS16710 PF00392 Bacterial regulatory proteins, gntR family SG48_RS16710 PF07729 FCD domain SG48_RS16715 PF03606 C4-dicarboxylate anaerobic carrier SG48_RS16720 PF04386 Stringent starvation protein B SG48_RS16725 PF02798 Glutathione S-transferase, N-terminal domain SG48_RS16725 PF00043 Glutathione S-transferase, C-terminal domain SG48_RS16730 PF00380 Ribosomal protein S9/S16 SG48_RS16735 PF00572 Ribosomal protein L13 SG48_RS16740 PF03969 AFG1-like ATPase SG48_RS16745 PF06295 Protein of unknown function (DUF1043) SG48_RS16750 PF00595 PDZ domain SG48_RS16750 PF13180 PDZ domain SG48_RS16755 PF13180 PDZ domain SG48_RS16760 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SG48_RS16760 PF00056 lactate/malate dehydrogenase, NAD binding domain SG48_RS16765 PF01316 Arginine repressor, DNA binding domain SG48_RS16765 PF02863 Arginine repressor, C-terminal domain SG48_RS16770 PF07338 Protein of unknown function (DUF1471) SG48_RS16775 PF01337 Barstar (barnase inhibitor) SG48_RS16780 PF04632 Fusaric acid resistance protein family SG48_RS16785 PF13533 Biotin-lipoyl like SG48_RS16790 PF07869 Protein of unknown function (DUF1656) SG48_RS16795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS16795 PF03466 LysR substrate binding domain SG48_RS16800 PF01523 Putative modulator of DNA gyrase SG48_RS16805 PF13116 Protein of unknown function SG48_RS16805 PF13502 AsmA-like C-terminal region SG48_RS16810 PF10150 Ribonuclease E/G family SG48_RS16810 PF00575 S1 RNA binding domain SG48_RS16815 PF02545 Maf-like protein SG48_RS16820 PF04093 rod shape-determining protein MreD SG48_RS16825 PF04085 rod shape-determining protein MreC SG48_RS16840 PF17157 Gammaproteobacterial periplasmic sensor domain SG48_RS16840 PF00990 Diguanylate cyclase, GGDEF domain SG48_RS16840 PF00563 EAL domain SG48_RS16845 PF08240 Alcohol dehydrogenase GroES-like domain SG48_RS16845 PF00107 Zinc-binding dehydrogenase SG48_RS16860 PF01794 Ferric reductase like transmembrane component SG48_RS16865 PF00364 Biotin-requiring enzyme SG48_RS16870 PF02785 Biotin carboxylase C-terminal domain SG48_RS16870 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SG48_RS16870 PF00289 Biotin carboxylase, N-terminal domain SG48_RS16875 PF06196 Protein of unknown function (DUF997) SG48_RS16880 PF00474 Sodium:solute symporter family SG48_RS16890 PF01207 Dihydrouridine synthase (Dus) SG48_RS16895 PF02954 Bacterial regulatory protein, Fis family SG48_RS16900 PF01555 DNA methylase SG48_RS16905 PF10831 Protein of unknown function (DUF2556) SG48_RS16910 PF08361 MAATS-type transcriptional repressor, C-terminal region SG48_RS16910 PF00440 Bacterial regulatory proteins, tetR family SG48_RS16915 PF00529 HlyD membrane-fusion protein of T1SS SG48_RS16915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SG48_RS16920 PF00873 AcrB/AcrD/AcrF family SG48_RS16935 PF00497 Bacterial extracellular solute-binding proteins, family 3 SG48_RS16940 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS16945 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS16950 PF00005 ABC transporter SG48_RS16990 PF00132 Bacterial transferase hexapeptide (six repeats) SG48_RS16995 PF07369 Protein of unknown function (DUF1488) SG48_RS17000 PF08501 Shikimate dehydrogenase substrate binding domain SG48_RS17000 PF01488 Shikimate / quinate 5-dehydrogenase SG48_RS17000 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SG48_RS17005 PF01300 Telomere recombination SG48_RS17010 PF01396 Topoisomerase DNA binding C4 zinc finger SG48_RS17015 PF04361 Protein of unknown function (DUF494) SG48_RS17020 PF02481 DNA recombination-mediator protein A SG48_RS17020 PF17782 DprA winged helix domain SG48_RS17025 PF01327 Polypeptide deformylase SG48_RS17030 PF00551 Formyl transferase SG48_RS17030 PF02911 Formyl transferase, C-terminal domain SG48_RS17035 PF01189 16S rRNA methyltransferase RsmB/F SG48_RS17035 PF01029 NusB family SG48_RS17040 PF02254 TrkA-N domain SG48_RS17040 PF02080 TrkA-C domain SG48_RS17045 PF01741 Large-conductance mechanosensitive channel, MscL SG48_RS17050 PF03889 Alternative ribosome-rescue factor A SG48_RS17055 PF13411 MerR HTH family regulatory protein SG48_RS17060 PF09350 Domain of unknown function (DUF1992) SG48_RS17065 PF01196 Ribosomal protein L17 SG48_RS17070 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SG48_RS17070 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SG48_RS17070 PF01000 RNA polymerase Rpb3/RpoA insert domain SG48_RS17075 PF01479 S4 domain SG48_RS17075 PF00163 Ribosomal protein S4/S9 N-terminal domain SG48_RS17080 PF00411 Ribosomal protein S11 SG48_RS17085 PF00416 Ribosomal protein S13/S18 SG48_RS17090 PF00444 Ribosomal protein L36 SG48_RS17095 PF00344 SecY translocase SG48_RS17100 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SG48_RS17105 PF00327 Ribosomal protein L30p/L7e SG48_RS17110 PF00333 Ribosomal protein S5, N-terminal domain SG48_RS17110 PF03719 Ribosomal protein S5, C-terminal domain SG48_RS17115 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SG48_RS17120 PF00347 Ribosomal protein L6 SG48_RS17125 PF00410 Ribosomal protein S8 SG48_RS17130 PF00253 Ribosomal protein S14p/S29e SG48_RS17135 PF00281 Ribosomal protein L5 SG48_RS17135 PF00673 ribosomal L5P family C-terminus SG48_RS17140 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SG48_RS17140 PF00467 KOW motif SG48_RS17145 PF00238 Ribosomal protein L14p/L23e SG48_RS17150 PF00366 Ribosomal protein S17 SG48_RS17155 PF00831 Ribosomal L29 protein SG48_RS17160 PF00252 Ribosomal protein L16p/L10e SG48_RS17165 PF07650 KH domain SG48_RS17165 PF00189 Ribosomal protein S3, C-terminal domain SG48_RS17170 PF00237 Ribosomal protein L22p/L17e SG48_RS17175 PF00203 Ribosomal protein S19 SG48_RS17180 PF03947 Ribosomal Proteins L2, C-terminal domain SG48_RS17180 PF00181 Ribosomal Proteins L2, RNA binding domain SG48_RS17185 PF00276 Ribosomal protein L23 SG48_RS17190 PF00573 Ribosomal protein L4/L1 family SG48_RS17195 PF00297 Ribosomal protein L3 SG48_RS17200 PF00338 Ribosomal protein S10p/S20e SG48_RS17210 PF13401 AAA domain SG48_RS17210 PF01471 Putative peptidoglycan binding domain SG48_RS17215 PF11356 Type II secretion system protein C SG48_RS17220 PF00263 Bacterial type II and III secretion system protein SG48_RS17220 PF03958 Bacterial type II/III secretion system short domain SG48_RS17225 PF00437 Type II/IV secretion system protein SG48_RS17230 PF00482 Type II secretion system (T2SS), protein F SG48_RS17235 PF07963 Prokaryotic N-terminal methylation motif SG48_RS17235 PF08334 Type II secretion system (T2SS), protein G SG48_RS17240 PF12019 Type II transport protein GspH SG48_RS17240 PF07963 Prokaryotic N-terminal methylation motif SG48_RS17245 PF02501 Type II secretion system (T2SS), protein I SG48_RS17245 PF07963 Prokaryotic N-terminal methylation motif SG48_RS17250 PF07963 Prokaryotic N-terminal methylation motif SG48_RS17250 PF11612 Type II secretion system (T2SS), protein J SG48_RS17255 PF03934 Type II secretion system (T2SS), protein K SG48_RS17260 PF12693 GspL periplasmic domain SG48_RS17260 PF05134 Type II secretion system (T2SS), protein L SG48_RS17265 PF04612 Type II secretion system (T2SS), protein M SG48_RS17270 PF01478 Type IV leader peptidase family SG48_RS17275 PF00210 Ferritin-like domain SG48_RS17280 PF04324 BFD-like [2Fe-2S] binding domain SG48_RS17285 PF02839 Carbohydrate binding domain SG48_RS17290 PF03143 Elongation factor Tu C-terminal domain SG48_RS17290 PF03144 Elongation factor Tu domain 2 SG48_RS17290 PF00009 Elongation factor Tu GTP binding domain SG48_RS17295 PF00679 Elongation factor G C-terminus SG48_RS17295 PF03764 Elongation factor G, domain IV SG48_RS17295 PF14492 Elongation Factor G, domain II SG48_RS17295 PF00009 Elongation factor Tu GTP binding domain SG48_RS17295 PF03144 Elongation factor Tu domain 2 SG48_RS17300 PF00177 Ribosomal protein S7p/S5e SG48_RS17305 PF00164 Ribosomal protein S12/S23 SG48_RS17310 PF04077 DsrH like protein SG48_RS17315 PF02635 DsrE/DsrF-like family SG48_RS17320 PF02635 DsrE/DsrF-like family SG48_RS17325 PF13309 HTH domain SG48_RS17325 PF08348 YheO-like PAS domain SG48_RS17330 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SG48_RS17330 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SG48_RS17335 PF04102 SlyX SG48_RS17340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SG48_RS17345 PF09526 Probable metal-binding protein (DUF2387) SG48_RS17350 PF02254 TrkA-N domain SG48_RS17350 PF00999 Sodium/hydrogen exchanger family SG48_RS17355 PF02525 Flavodoxin-like fold SG48_RS17360 PF00005 ABC transporter SG48_RS17360 PF12848 ABC transporter SG48_RS17365 PF00561 alpha/beta hydrolase fold SG48_RS17370 PF06794 Uncharacterised protein family (UPF0270) SG48_RS17375 PF00485 Phosphoribulokinase / Uridine kinase family SG48_RS17380 PF02566 OsmC-like protein SG48_RS17390 PF13545 Crp-like helix-turn-helix domain SG48_RS17390 PF00027 Cyclic nucleotide-binding domain SG48_RS17395 PF12805 FUSC-like inner membrane protein yccS SG48_RS17400 PF00202 Aminotransferase class-III SG48_RS17405 PF00117 Glutamine amidotransferase class-I SG48_RS17410 PF02661 Fic/DOC family SG48_RS17415 PF10832 Protein of unknown function (DUF2559) SG48_RS17420 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SG48_RS17425 PF07690 Major Facilitator Superfamily SG48_RS17430 PF04324 BFD-like [2Fe-2S] binding domain SG48_RS17430 PF18267 Rubredoxin NAD+ reductase C-terminal domain SG48_RS17430 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SG48_RS17430 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SG48_RS17430 PF07992 Pyridine nucleotide-disulphide oxidoreductase SG48_RS17435 PF13806 Rieske-like [2Fe-2S] domain SG48_RS17440 PF01226 Formate/nitrite transporter SG48_RS17445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SG48_RS17445 PF10414 Sirohaem synthase dimerisation region SG48_RS17445 PF14824 Sirohaem biosynthesis protein central SG48_RS17450 PF13978 Protein of unknown function (DUF4223) SG48_RS17455 PF13520 Amino acid permease SG48_RS17460 PF01380 SIS domain SG48_RS17465 PF01261 Xylose isomerase-like TIM barrel SG48_RS17470 PF00294 pfkB family carbohydrate kinase SG48_RS17475 PF07702 UTRA domain SG48_RS17475 PF00392 Bacterial regulatory proteins, gntR family SG48_RS17480 PF00155 Aminotransferase class I and II SG48_RS17485 PF10797 Protein of unknown function SG48_RS17490 PF10941 Protein of unknown function DUF2620 SG48_RS17495 PF02126 Phosphotriesterase family SG48_RS17500 PF01676 Metalloenzyme superfamily SG48_RS17505 PF01168 Alanine racemase, N-terminal domain SG48_RS17515 PF14503 YhfZ C-terminal domain SG48_RS17515 PF14502 Helix-turn-helix domain SG48_RS17520 PF00579 tRNA synthetases class I (W and Y) SG48_RS17525 PF13419 Haloacid dehalogenase-like hydrolase SG48_RS17530 PF00834 Ribulose-phosphate 3 epimerase family SG48_RS17535 PF02086 D12 class N6 adenine-specific DNA methyltransferase SG48_RS17540 PF05036 Sporulation related domain SG48_RS17545 PF01761 3-dehydroquinate synthase SG48_RS17550 PF01202 Shikimate kinase SG48_RS17555 PF03958 Bacterial type II/III secretion system short domain SG48_RS17555 PF00263 Bacterial type II and III secretion system protein SG48_RS17560 PF10748 DNA utilization proteins HofP SG48_RS17570 PF05137 Fimbrial assembly protein (PilN) SG48_RS17580 PF00912 Transglycosylase SG48_RS17580 PF00905 Penicillin binding protein transpeptidase domain SG48_RS17580 PF17092 Penicillin-binding protein OB-like domain SG48_RS17585 PF00293 NUDIX domain SG48_RS17590 PF07095 Intracellular growth attenuator protein IgaA SG48_RS17595 PF13419 Haloacid dehalogenase-like hydrolase SG48_RS17600 PF01479 S4 domain SG48_RS17605 PF01430 Hsp33 protein SG48_RS17610 PF13687 Domain of unknown function (DUF4153) SG48_RS17620 PF01293 Phosphoenolpyruvate carboxykinase SG48_RS17625 PF00512 His Kinase A (phospho-acceptor) domain SG48_RS17625 PF00672 HAMP domain SG48_RS17625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS17630 PF00072 Response regulator receiver domain SG48_RS17630 PF00486 Transcriptional regulatory protein, C terminal SG48_RS17635 PF03449 Transcription elongation factor, N-terminal SG48_RS17635 PF01272 Transcription elongation factor, GreA/GreB, C-term SG48_RS17640 PF17674 HHH domain SG48_RS17640 PF16921 Tex protein YqgF-like domain SG48_RS17640 PF00575 S1 RNA binding domain SG48_RS17640 PF09371 Tex-like protein N-terminal domain SG48_RS17645 PF04023 FeoA domain SG48_RS17650 PF07670 Nucleoside recognition SG48_RS17650 PF02421 Ferrous iron transport protein B SG48_RS17650 PF07664 Ferrous iron transport protein B C terminus SG48_RS17650 PF17910 FeoB cytosolic helical domain SG48_RS17655 PF09012 FeoC like transcriptional regulator SG48_RS17660 PF04754 Putative transposase, YhgA-like SG48_RS17665 PF00561 alpha/beta hydrolase fold SG48_RS17670 PF00156 Phosphoribosyl transferase domain SG48_RS17675 PF01106 NifU-like domain SG48_RS17675 PF01521 Iron-sulphur cluster biosynthesis SG48_RS17680 PF02447 GntP family permease SG48_RS17685 PF02446 4-alpha-glucanotransferase SG48_RS17690 PF00343 Carbohydrate phosphorylase SG48_RS17695 PF17874 MalT-like TPR region SG48_RS17695 PF00196 Bacterial regulatory proteins, luxR family SG48_RS17700 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain SG48_RS17700 PF01137 RNA 3'-terminal phosphate cyclase SG48_RS17705 PF01139 tRNA-splicing ligase RtcB SG48_RS17710 PF00158 Sigma-54 interaction domain SG48_RS17710 PF06956 Regulator of RNA terminal phosphate cyclase SG48_RS17715 PF08220 DeoR-like helix-turn-helix domain SG48_RS17715 PF00455 DeoR C terminal sensor domain SG48_RS17720 PF01694 Rhomboid family SG48_RS17720 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease SG48_RS17725 PF00581 Rhodanese-like domain SG48_RS17730 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SG48_RS17730 PF01266 FAD dependent oxidoreductase SG48_RS17740 PF00343 Carbohydrate phosphorylase SG48_RS17745 PF08323 Starch synthase catalytic domain SG48_RS17745 PF00534 Glycosyl transferases group 1 SG48_RS17750 PF00483 Nucleotidyl transferase SG48_RS17755 PF00128 Alpha amylase, catalytic domain SG48_RS17755 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SG48_RS17755 PF18390 Glycogen debranching enzyme C-terminal domain SG48_RS17760 PF02806 Alpha amylase, C-terminal all-beta domain SG48_RS17760 PF00128 Alpha amylase, catalytic domain SG48_RS17760 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SG48_RS17765 PF01118 Semialdehyde dehydrogenase, NAD binding domain SG48_RS17765 PF02774 Semialdehyde dehydrogenase, dimerisation domain SG48_RS17770 PF01914 MarC family integral membrane protein SG48_RS17775 PF02447 GntP family permease SG48_RS17780 PF01202 Shikimate kinase SG48_RS17785 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SG48_RS17785 PF00356 Bacterial regulatory proteins, lacI family SG48_RS17790 PF17954 Quercetinase C-terminal cupin domain SG48_RS17790 PF02678 Pirin SG48_RS17795 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SG48_RS17795 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SG48_RS17800 PF00583 Acetyltransferase (GNAT) family SG48_RS17805 PF05638 Type VI secretion system effector, Hcp SG48_RS17815 PF03400 IS1 transposase SG48_RS17820 PF15567 Immunity protein 35 SG48_RS17830 PF10956 Protein of unknown function (DUF2756) SG48_RS17835 PF03009 Glycerophosphoryl diester phosphodiesterase family SG48_RS17840 PF17912 MalK OB fold domain SG48_RS17840 PF00005 ABC transporter SG48_RS17845 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS17850 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS17855 PF13416 Bacterial extracellular solute-binding protein SG48_RS17865 PF00005 ABC transporter SG48_RS17870 PF00005 ABC transporter SG48_RS17870 PF12399 Branched-chain amino acid ATP-binding cassette transporter SG48_RS17875 PF11862 Domain of unknown function (DUF3382) SG48_RS17875 PF02653 Branched-chain amino acid transport system / permease component SG48_RS17880 PF02653 Branched-chain amino acid transport system / permease component SG48_RS17885 PF13458 Periplasmic binding protein SG48_RS17890 PF12568 Acetyltransferase (GNAT) domain, PanZ SG48_RS17900 PF13458 Periplasmic binding protein SG48_RS17905 PF04545 Sigma-70, region 4 SG48_RS17905 PF04542 Sigma-70 region 2 SG48_RS17910 PF18075 FtsX extracellular domain SG48_RS17910 PF02687 FtsX-like permease family SG48_RS17915 PF00005 ABC transporter SG48_RS17920 PF02881 SRP54-type protein, helical bundle domain SG48_RS17920 PF00448 SRP54-type protein, GTPase domain SG48_RS17930 PF06611 Protein of unknown function (DUF1145) SG48_RS17935 PF10694 Protein of unknown function (DUF2500) SG48_RS17940 PF07947 YhhN family SG48_RS17945 PF00403 Heavy-metal-associated domain SG48_RS17950 PF01206 Sulfurtransferase TusA SG48_RS17955 PF02592 Putative vitamin uptake transporter SG48_RS17960 PF08786 DcrB SG48_RS17965 PF07690 Major Facilitator Superfamily SG48_RS17970 PF01594 AI-2E family transporter SG48_RS17975 PF01648 4'-phosphopantetheinyl transferase superfamily SG48_RS17980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SG48_RS17985 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS17990 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS17995 PF00005 ABC transporter SG48_RS18000 PF00005 ABC transporter SG48_RS18005 PF08753 NikR C terminal nickel binding domain SG48_RS18005 PF01402 Ribbon-helix-helix protein, copG family SG48_RS18010 PF05593 RHS Repeat SG48_RS18010 PF03527 RHS protein SG48_RS18010 PF14220 Domain of unknown function (DUF4329) SG48_RS18015 PF15631 NTF2 fold immunity protein SG48_RS18025 PF01609 Transposase DDE domain SG48_RS18025 PF13808 DDE_Tnp_1-associated SG48_RS18035 PF00005 ABC transporter SG48_RS18040 PF13533 Biotin-lipoyl like SG48_RS18045 PF13258 Domain of unknown function (DUF4049) SG48_RS18065 PF10951 Protein of unknown function (DUF2776) SG48_RS18075 PF01384 Phosphate transporter family SG48_RS18080 PF10625 Universal stress protein B (UspB) SG48_RS18085 PF00582 Universal stress protein family SG48_RS18090 PF00854 POT family SG48_RS18095 PF04445 Putative SAM-dependent methyltransferase SG48_RS18100 PF01432 Peptidase family M3 SG48_RS18105 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ SG48_RS18110 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SG48_RS18110 PF07992 Pyridine nucleotide-disulphide oxidoreductase SG48_RS18125 PF01022 Bacterial regulatory protein, arsR family SG48_RS18130 PF02040 Arsenical pump membrane protein SG48_RS18135 PF03960 ArsC family SG48_RS18145 PF01609 Transposase DDE domain SG48_RS18145 PF05598 Transposase domain (DUF772) SG48_RS18155 PF03843 Outer membrane lipoprotein Slp family SG48_RS18160 PF00196 Bacterial regulatory proteins, luxR family SG48_RS18165 PF02308 MgtC family SG48_RS18170 PF06411 HdeA/HdeB family SG48_RS18175 PF06411 HdeA/HdeB family SG48_RS18180 PF03729 Short repeat of unknown function (DUF308) SG48_RS18185 PF00196 Bacterial regulatory proteins, luxR family SG48_RS18195 PF00529 HlyD membrane-fusion protein of T1SS SG48_RS18195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SG48_RS18200 PF00873 AcrB/AcrD/AcrF family SG48_RS18205 PF12833 Helix-turn-helix domain SG48_RS18210 PF12833 Helix-turn-helix domain SG48_RS18215 PF00282 Pyridoxal-dependent decarboxylase conserved domain SG48_RS18220 PF14376 Haem-binding domain SG48_RS18220 PF00034 Cytochrome c SG48_RS18220 PF03150 Di-haem cytochrome c peroxidase SG48_RS18225 PF01204 Trehalase SG48_RS18230 PF00196 Bacterial regulatory proteins, luxR family SG48_RS18235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS18235 PF03466 LysR substrate binding domain SG48_RS18240 PF03631 Virulence factor BrkB SG48_RS18245 PF00083 Sugar (and other) transporter SG48_RS18245 PF07690 Major Facilitator Superfamily SG48_RS18250 PF05170 AsmA family SG48_RS18255 PF00563 EAL domain SG48_RS18265 PF00294 pfkB family carbohydrate kinase SG48_RS18270 PF00675 Insulinase (Peptidase family M16) SG48_RS18270 PF05193 Peptidase M16 inactive domain SG48_RS18275 PF00375 Sodium:dicarboxylate symporter family SG48_RS18280 PF00563 EAL domain SG48_RS18280 PF17154 Gammaproteobacterial periplasmic sensor domain SG48_RS18280 PF00990 Diguanylate cyclase, GGDEF domain SG48_RS18280 PF00672 HAMP domain SG48_RS18285 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) SG48_RS18290 PF01270 Glycosyl hydrolases family 8 SG48_RS18295 PF03170 Bacterial cellulose synthase subunit SG48_RS18300 PF07238 PilZ domain SG48_RS18300 PF00535 Glycosyl transferase family 2 SG48_RS18300 PF03552 Cellulose synthase SG48_RS18305 PF06564 Cellulose biosynthesis protein BcsQ SG48_RS18310 PF10945 Cellulose biosynthesis protein BcsR SG48_RS18315 PF10995 Cellulose biosynthesis GIL SG48_RS18320 PF11120 Cellulose biosynthesis protein BcsF SG48_RS18325 PF11658 Cellulose biosynthesis protein BcsG SG48_RS18330 PF13940 Toxin Ldr, type I toxin-antitoxin system SG48_RS18340 PF03222 Tryptophan/tyrosine permease family SG48_RS18345 PF00005 ABC transporter SG48_RS18345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SG48_RS18350 PF00005 ABC transporter SG48_RS18350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SG48_RS18355 PF12911 N-terminal TM domain of oligopeptide transport permease C SG48_RS18355 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS18360 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS18370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SG48_RS18385 PF00884 Sulfatase SG48_RS18385 PF08019 Phosphoethanolamine transferase EptA/EptB SG48_RS18390 PF07690 Major Facilitator Superfamily SG48_RS18395 PF03797 Autotransporter beta-domain SG48_RS18400 PF03352 Methyladenine glycosylase SG48_RS18405 PF00583 Acetyltransferase (GNAT) family SG48_RS18410 PF18364 Molybdopterin oxidoreductase N-terminal domain SG48_RS18410 PF01568 Molydopterin dinucleotide binding domain SG48_RS18410 PF00384 Molybdopterin oxidoreductase SG48_RS18415 PF13488 Glycine zipper SG48_RS18415 PF00691 OmpA family SG48_RS18420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SG48_RS18420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SG48_RS18425 PF11254 Protein of unknown function (DUF3053) SG48_RS18430 PF01381 Helix-turn-helix SG48_RS18435 PF00313 'Cold-shock' DNA-binding domain SG48_RS18440 PF01848 Hok/gef family SG48_RS18450 PF00665 Integrase core domain SG48_RS18450 PF13276 HTH-like domain SG48_RS18450 PF13333 Integrase core domain SG48_RS18455 PF02092 Glycyl-tRNA synthetase beta subunit SG48_RS18455 PF05746 DALR anticodon binding domain SG48_RS18460 PF02091 Glycyl-tRNA synthetase alpha subunit SG48_RS18465 PF13983 YsaB-like lipoprotein SG48_RS18470 PF01757 Acyltransferase family SG48_RS18475 PF05360 yiaA/B two helix domain SG48_RS18480 PF05360 yiaA/B two helix domain SG48_RS18485 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SG48_RS18485 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SG48_RS18495 PF13407 Periplasmic binding protein domain SG48_RS18500 PF00005 ABC transporter SG48_RS18505 PF02653 Branched-chain amino acid transport system / permease component SG48_RS18510 PF12833 Helix-turn-helix domain SG48_RS18515 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SG48_RS18520 PF00128 Alpha amylase, catalytic domain SG48_RS18525 PF00155 Aminotransferase class I and II SG48_RS18535 PF13247 4Fe-4S dicluster domain SG48_RS18540 PF09339 IclR helix-turn-helix domain SG48_RS18540 PF01614 Bacterial transcriptional regulator SG48_RS18545 PF02615 Malate/L-lactate dehydrogenase SG48_RS18550 PF04074 YhcH/YjgK/YiaL SG48_RS18555 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component SG48_RS18560 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component SG48_RS18565 PF03480 Bacterial extracellular solute-binding protein, family 7 SG48_RS18570 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SG48_RS18570 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SG48_RS18575 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SG48_RS18580 PF01261 Xylose isomerase-like TIM barrel SG48_RS18585 PF00596 Class II Aldolase and Adducin N-terminal domain SG48_RS18590 PF06629 MltA-interacting protein MipA SG48_RS18595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS18595 PF03466 LysR substrate binding domain SG48_RS18600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SG48_RS18600 PF00529 HlyD membrane-fusion protein of T1SS SG48_RS18605 PF11742 Protein of unknown function (DUF3302) SG48_RS18615 PF00171 Aldehyde dehydrogenase family SG48_RS18620 PF00465 Iron-containing alcohol dehydrogenase SG48_RS18625 PF03144 Elongation factor Tu domain 2 SG48_RS18625 PF09106 Elongation factor SelB, winged helix SG48_RS18625 PF00009 Elongation factor Tu GTP binding domain SG48_RS18625 PF09107 Elongation factor SelB, winged helix SG48_RS18630 PF12390 Selenocysteine synthase N terminal SG48_RS18630 PF03841 L-seryl-tRNA selenium transferase SG48_RS18635 PF00043 Glutathione S-transferase, C-terminal domain SG48_RS18635 PF13417 Glutathione S-transferase, N-terminal domain SG48_RS18640 PF15606 Bacterial toxin 34 SG48_RS18640 PF03527 RHS protein SG48_RS18640 PF05593 RHS Repeat SG48_RS18645 PF03130 PBS lyase HEAT-like repeat SG48_RS18650 PF03527 RHS protein SG48_RS18665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SG48_RS18665 PF00529 HlyD membrane-fusion protein of T1SS SG48_RS18670 PF11742 Protein of unknown function (DUF3302) SG48_RS18675 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SG48_RS18675 PF02378 Phosphotransferase system, EIIC SG48_RS18675 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SG48_RS18680 PF01232 Mannitol dehydrogenase Rossmann domain SG48_RS18680 PF08125 Mannitol dehydrogenase C-terminal domain SG48_RS18685 PF05068 Mannitol repressor SG48_RS18695 PF10928 Protein of unknown function (DUF2810) SG48_RS18700 PF02652 L-lactate permease SG48_RS18705 PF00392 Bacterial regulatory proteins, gntR family SG48_RS18705 PF07729 FCD domain SG48_RS18710 PF01070 FMN-dependent dehydrogenase SG48_RS18715 PF00588 SpoU rRNA Methylase family SG48_RS18720 PF06426 Serine acetyltransferase, N-terminal SG48_RS18720 PF00132 Bacterial transferase hexapeptide (six repeats) SG48_RS18725 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SG48_RS18725 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SG48_RS18730 PF02556 Preprotein translocase subunit SecB SG48_RS18735 PF00462 Glutaredoxin SG48_RS18740 PF00581 Rhodanese-like domain SG48_RS18745 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SG48_RS18745 PF01676 Metalloenzyme superfamily SG48_RS18750 PF01551 Peptidase family M23 SG48_RS18755 PF04748 Divergent polysaccharide deacetylase SG48_RS18760 PF00535 Glycosyl transferase family 2 SG48_RS18765 PF00107 Zinc-binding dehydrogenase SG48_RS18765 PF08240 Alcohol dehydrogenase GroES-like domain SG48_RS18770 PF00155 Aminotransferase class I and II SG48_RS18775 PF09612 Bacterial protein of unknown function (HtrL_YibB) SG48_RS18780 PF01370 NAD dependent epimerase/dehydratase family SG48_RS18785 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SG48_RS18790 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SG48_RS18795 PF04932 O-Antigen ligase SG48_RS18800 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SG48_RS18810 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) SG48_RS18815 PF01501 Glycosyl transferase family 8 SG48_RS18815 PF08437 Glycosyl transferase family 8 C-terminal SG48_RS18820 PF08437 Glycosyl transferase family 8 C-terminal SG48_RS18820 PF01501 Glycosyl transferase family 8 SG48_RS18825 PF13439 Glycosyltransferase Family 4 SG48_RS18825 PF00534 Glycosyl transferases group 1 SG48_RS18840 PF00534 Glycosyl transferases group 1 SG48_RS18840 PF13439 Glycosyltransferase Family 4 SG48_RS18845 PF01075 Glycosyltransferase family 9 (heptosyltransferase) SG48_RS18850 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) SG48_RS18855 PF01467 Cytidylyltransferase-like SG48_RS18860 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SG48_RS18860 PF06827 Zinc finger found in FPG and IleRS SG48_RS18860 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SG48_RS18865 PF00471 Ribosomal protein L33 SG48_RS18870 PF00830 Ribosomal L28 family SG48_RS18875 PF04002 RadC-like JAB domain SG48_RS18880 PF02441 Flavoprotein SG48_RS18880 PF04127 DNA / pantothenate metabolism flavoprotein SG48_RS18885 PF00692 dUTPase SG48_RS18890 PF00440 Bacterial regulatory proteins, tetR family SG48_RS18895 PF00156 Phosphoribosyl transferase domain SG48_RS18900 PF01138 3' exoribonuclease family, domain 1 SG48_RS18900 PF03725 3' exoribonuclease family, domain 2 SG48_RS18905 PF03755 YicC-like family, N-terminal region SG48_RS18905 PF08340 Domain of unknown function (DUF1732) SG48_RS18915 PF03458 UPF0126 domain SG48_RS18920 PF03120 NAD-dependent DNA ligase OB-fold domain SG48_RS18920 PF01653 NAD-dependent DNA ligase adenylation domain SG48_RS18925 PF00625 Guanylate kinase SG48_RS18930 PF01192 RNA polymerase Rpb6 SG48_RS18935 PF13291 ACT domain SG48_RS18935 PF04607 Region found in RelA / SpoT proteins SG48_RS18935 PF02824 TGS domain SG48_RS18940 PF00588 SpoU rRNA Methylase family SG48_RS18940 PF12105 SpoU, rRNA methylase, C-terminal SG48_RS18945 PF00271 Helicase conserved C-terminal domain SG48_RS18945 PF00270 DEAD/DEAH box helicase SG48_RS18945 PF17191 RecG wedge domain SG48_RS18950 PF03616 Sodium/glutamate symporter SG48_RS18955 PF00860 Permease family SG48_RS18960 PF05170 AsmA family SG48_RS18965 PF01055 Glycosyl hydrolases family 31 SG48_RS18965 PF13802 Galactose mutarotase-like SG48_RS18985 PF07690 Major Facilitator Superfamily SG48_RS18990 PF00892 EamA-like transporter family SG48_RS18995 PF03180 NLPA lipoprotein SG48_RS19010 PF07690 Major Facilitator Superfamily SG48_RS19015 PF06711 Protein of unknown function (DUF1198) SG48_RS19020 PF00860 Permease family SG48_RS19025 PF13382 Adenine deaminase C-terminal domain SG48_RS19025 PF01979 Amidohydrolase family SG48_RS19030 PF07690 Major Facilitator Superfamily SG48_RS19035 PF07690 Major Facilitator Superfamily SG48_RS19040 PF05231 MASE1 SG48_RS19040 PF07730 Histidine kinase SG48_RS19040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS19045 PF00196 Bacterial regulatory proteins, luxR family SG48_RS19045 PF00072 Response regulator receiver domain SG48_RS19050 PF01842 ACT domain SG48_RS19055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SG48_RS19055 PF00205 Thiamine pyrophosphate enzyme, central domain SG48_RS19055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SG48_RS19060 PF08049 IlvB leader peptide SG48_RS19075 PF13939 Toxin TisB, type I toxin-antitoxin system SG48_RS19080 PF07690 Major Facilitator Superfamily SG48_RS19090 PF02656 Domain of unknown function (DUF202) SG48_RS19095 PF02656 Domain of unknown function (DUF202) SG48_RS19105 PF00884 Sulfatase SG48_RS19105 PF16347 Domain of unknown function (DUF4976) SG48_RS19110 PF00474 Sodium:solute symporter family SG48_RS19115 PF12833 Helix-turn-helix domain SG48_RS19115 PF02311 AraC-like ligand binding domain SG48_RS19120 PF02056 Family 4 glycosyl hydrolase SG48_RS19125 PF00367 phosphotransferase system, EIIB SG48_RS19130 PF02378 Phosphotransferase system, EIIC SG48_RS19135 PF07702 UTRA domain SG48_RS19135 PF00392 Bacterial regulatory proteins, gntR family SG48_RS19140 PF06826 Predicted Permease Membrane Region SG48_RS19140 PF02080 TrkA-C domain SG48_RS19145 PF00011 Hsp20/alpha crystallin family SG48_RS19150 PF00011 Hsp20/alpha crystallin family SG48_RS19155 PF07119 Protein of unknown function (DUF1375) SG48_RS19160 PF07676 WD40-like Beta Propeller Repeat SG48_RS19160 PF12566 Protein of unknown function (DUF3748) SG48_RS19165 PF01494 FAD binding domain SG48_RS19170 PF07690 Major Facilitator Superfamily SG48_RS19175 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SG48_RS19175 PF13378 Enolase C-terminal domain-like SG48_RS19180 PF01081 KDPG and KHG aldolase SG48_RS19185 PF05035 2-keto-3-deoxy-galactonokinase SG48_RS19190 PF00392 Bacterial regulatory proteins, gntR family SG48_RS19190 PF07729 FCD domain SG48_RS19205 PF06078 Bacterial protein of unknown function (DUF937) SG48_RS19215 PF18053 DNA gyrase B subunit insert domain SG48_RS19215 PF00986 DNA gyrase B subunit, carboxyl terminus SG48_RS19215 PF00204 DNA gyrase B SG48_RS19215 PF01751 Toprim domain SG48_RS19215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS19220 PF02463 RecF/RecN/SMC N terminal domain SG48_RS19225 PF02767 DNA polymerase III beta subunit, central domain SG48_RS19225 PF00712 DNA polymerase III beta subunit, N-terminal domain SG48_RS19225 PF02768 DNA polymerase III beta subunit, C-terminal domain SG48_RS19230 PF00308 Bacterial dnaA protein SG48_RS19230 PF11638 DnaA N-terminal domain SG48_RS19230 PF08299 Bacterial dnaA protein helix-turn-helix SG48_RS19235 PF00468 Ribosomal protein L34 SG48_RS19240 PF00825 Ribonuclease P SG48_RS19245 PF01809 Putative membrane protein insertion efficiency factor SG48_RS19250 PF02096 60Kd inner membrane protein SG48_RS19250 PF14849 YidC periplasmic domain SG48_RS19255 PF10396 GTP-binding protein TrmE N-terminus SG48_RS19255 PF01926 50S ribosome-binding GTPase SG48_RS19255 PF12631 MnmE helical domain SG48_RS19260 PF08053 Tryptophanase operon leader peptide SG48_RS19265 PF01212 Beta-eliminating lyase SG48_RS19270 PF03222 Tryptophan/tyrosine permease family SG48_RS19275 PF07690 Major Facilitator Superfamily SG48_RS19280 PF03466 LysR substrate binding domain SG48_RS19280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS19290 PF03358 NADPH-dependent FMN reductase SG48_RS19295 PF00860 Permease family SG48_RS19300 PF13419 Haloacid dehalogenase-like hydrolase SG48_RS19310 PF03691 Uncharacterised protein family (UPF0167) SG48_RS19315 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SG48_RS19320 PF00756 Putative esterase SG48_RS19320 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SG48_RS19325 PF02264 LamB porin SG48_RS19325 PF11471 Maltoporin periplasmic N-terminal extension SG48_RS19330 PF00232 Glycosyl hydrolase family 1 SG48_RS19335 PF02378 Phosphotransferase system, EIIC SG48_RS19335 PF00367 phosphotransferase system, EIIB SG48_RS19335 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SG48_RS19340 PF00874 PRD domain SG48_RS19340 PF03123 CAT RNA binding domain SG48_RS19345 PF01895 PhoU domain SG48_RS19350 PF00005 ABC transporter SG48_RS19355 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS19360 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS19365 PF12849 PBP superfamily domain SG48_RS19370 PF01380 SIS domain SG48_RS19375 PF00132 Bacterial transferase hexapeptide (six repeats) SG48_RS19375 PF14602 Hexapeptide repeat of succinyl-transferase SG48_RS19375 PF12804 MobA-like NTP transferase domain SG48_RS19380 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SG48_RS19380 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SG48_RS19385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SG48_RS19385 PF02874 ATP synthase alpha/beta family, beta-barrel domain SG48_RS19390 PF00231 ATP synthase SG48_RS19395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SG48_RS19395 PF02874 ATP synthase alpha/beta family, beta-barrel domain SG48_RS19395 PF00306 ATP synthase alpha/beta chain, C terminal domain SG48_RS19400 PF00213 ATP synthase delta (OSCP) subunit SG48_RS19405 PF00430 ATP synthase B/B' CF(0) SG48_RS19410 PF00137 ATP synthase subunit C SG48_RS19415 PF00119 ATP synthase A chain SG48_RS19420 PF03899 ATP synthase I chain SG48_RS19425 PF02527 rRNA small subunit methyltransferase G SG48_RS19430 PF01134 Glucose inhibited division protein A SG48_RS19430 PF13932 GidA associated domain SG48_RS19435 PF00258 Flavodoxin SG48_RS19440 PF01037 Lrp/AsnC ligand binding domain SG48_RS19445 PF03590 Aspartate-ammonia ligase SG48_RS19450 PF05762 VWA domain containing CoxE-like protein SG48_RS19455 PF12592 Protein of unknown function (DUF3763) SG48_RS19455 PF07728 AAA domain (dynein-related subfamily) SG48_RS19455 PF17868 AAA lid domain SG48_RS19460 PF02705 K+ potassium transporter SG48_RS19465 PF05025 RbsD / FucU transport protein family SG48_RS19470 PF00005 ABC transporter SG48_RS19475 PF02653 Branched-chain amino acid transport system / permease component SG48_RS19480 PF13407 Periplasmic binding protein domain SG48_RS19485 PF00294 pfkB family carbohydrate kinase SG48_RS19490 PF00356 Bacterial regulatory proteins, lacI family SG48_RS19495 PF07690 Major Facilitator Superfamily SG48_RS19500 PF00392 Bacterial regulatory proteins, gntR family SG48_RS19500 PF07729 FCD domain SG48_RS19535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS19535 PF03466 LysR substrate binding domain SG48_RS19540 PF04219 Protein of unknown function, DUF SG48_RS19545 PF13335 Magnesium chelatase, subunit ChlI C-terminal SG48_RS19545 PF01078 Magnesium chelatase, subunit ChlI SG48_RS19550 PF08046 IlvGEDA operon leader peptide SG48_RS19565 PF01063 Amino-transferase class IV SG48_RS19570 PF00920 Dehydratase family SG48_RS19575 PF00291 Pyridoxal-phosphate dependent enzyme SG48_RS19575 PF00585 C-terminal regulatory domain of Threonine dehydratase SG48_RS19580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS19580 PF03466 LysR substrate binding domain SG48_RS19585 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SG48_RS19585 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SG48_RS19600 PF00580 UvrD/REP helicase N-terminal domain SG48_RS19600 PF13361 UvrD-like helicase C-terminal domain SG48_RS19605 PF02541 Ppx/GppA phosphatase family SG48_RS19610 PF00271 Helicase conserved C-terminal domain SG48_RS19610 PF00270 DEAD/DEAH box helicase SG48_RS19615 PF00085 Thioredoxin SG48_RS19625 PF07498 Rho termination factor, N-terminal domain SG48_RS19625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SG48_RS19625 PF07497 Rho termination factor, RNA-binding domain SG48_RS19635 PF00953 Glycosyl transferase family 4 SG48_RS19640 PF02706 Chain length determinant protein SG48_RS19645 PF02350 UDP-N-acetylglucosamine 2-epimerase SG48_RS19650 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SG48_RS19650 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SG48_RS19650 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SG48_RS19655 PF16363 GDP-mannose 4,6 dehydratase SG48_RS19660 PF00483 Nucleotidyl transferase SG48_RS19670 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SG48_RS19675 PF01943 Polysaccharide biosynthesis protein SG48_RS19680 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 SG48_RS19685 PF06899 WzyE protein, O-antigen assembly polymerase SG48_RS19690 PF03808 Glycosyl transferase WecB/TagA/CpsF family SG48_RS19695 PF00324 Amino acid permease SG48_RS19720 PF04055 Radical SAM superfamily SG48_RS19720 PF13186 Iron-sulfur cluster-binding domain SG48_RS19725 PF00884 Sulfatase SG48_RS19730 PF07719 Tetratricopeptide repeat SG48_RS19730 PF07219 HemY protein N-terminus SG48_RS19735 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase SG48_RS19740 PF02602 Uroporphyrinogen-III synthase HemD SG48_RS19745 PF03900 Porphobilinogen deaminase, C-terminal domain SG48_RS19745 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SG48_RS19750 PF12633 Adenylate cyclase NT domain SG48_RS19750 PF01295 Adenylate cyclase, class-I SG48_RS19755 PF01491 Frataxin-like domain SG48_RS19760 PF13627 Prokaryotic lipoprotein-attachment site SG48_RS19765 PF01678 Diaminopimelate epimerase SG48_RS19770 PF04340 Protein of unknown function, DUF484 SG48_RS19775 PF02899 Phage integrase, N-terminal SAM-like domain SG48_RS19775 PF00589 Phage integrase family SG48_RS19780 PF13419 Haloacid dehalogenase-like hydrolase SG48_RS19785 PF13361 UvrD-like helicase C-terminal domain SG48_RS19785 PF00580 UvrD/REP helicase N-terminal domain SG48_RS19790 PF09992 Phosphodiester glycosidase SG48_RS19800 PF01544 CorA-like Mg2+ transporter protein SG48_RS19805 PF10947 Protein of unknown function (DUF2628) SG48_RS19815 PF00892 EamA-like transporter family SG48_RS19820 PF03061 Thioesterase superfamily SG48_RS19825 PF02253 Phospholipase A1 SG48_RS19830 PF16124 RecQ zinc-binding SG48_RS19830 PF00270 DEAD/DEAH box helicase SG48_RS19830 PF00271 Helicase conserved C-terminal domain SG48_RS19830 PF00570 HRDC domain SG48_RS19830 PF09382 RQC domain SG48_RS19835 PF01810 LysE type translocator SG48_RS19840 PF01810 LysE type translocator SG48_RS19845 PF12146 Serine aminopeptidase, S33 SG48_RS19855 PF00892 EamA-like transporter family SG48_RS19860 PF03466 LysR substrate binding domain SG48_RS19860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS19865 PF01717 Cobalamin-independent synthase, Catalytic domain SG48_RS19865 PF08267 Cobalamin-independent synthase, N-terminal domain SG48_RS19870 PF01738 Dienelactone hydrolase family SG48_RS19875 PF01048 Phosphorylase superfamily SG48_RS19880 PF02646 RmuC family SG48_RS19885 PF01209 ubiE/COQ5 methyltransferase family SG48_RS19890 PF02036 SCP-2 sterol transfer family SG48_RS19895 PF03109 ABC1 family SG48_RS19900 PF02416 mttA/Hcf106 family SG48_RS19910 PF00902 Sec-independent protein translocase protein (TatC) SG48_RS19915 PF01026 TatD related DNase SG48_RS19920 PF02357 Transcription termination factor nusG SG48_RS19925 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SG48_RS19930 PF00175 Oxidoreductase NAD-binding domain SG48_RS19930 PF00970 Oxidoreductase FAD-binding domain SG48_RS19935 PF00108 Thiolase, N-terminal domain SG48_RS19935 PF02803 Thiolase, C-terminal domain SG48_RS19940 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SG48_RS19940 PF00378 Enoyl-CoA hydratase/isomerase SG48_RS19940 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SG48_RS19945 PF00557 Metallopeptidase family M24 SG48_RS19950 PF01205 Uncharacterized protein family UPF0029 SG48_RS19950 PF09186 Domain of unknown function (DUF1949) SG48_RS19955 PF02386 Cation transport protein SG48_RS19960 PF12724 Flavodoxin domain SG48_RS19990 PF03205 Molybdopterin guanine dinucleotide synthesis protein B SG48_RS19995 PF12804 MobA-like NTP transferase domain SG48_RS20000 PF06288 Protein of unknown function (DUF1040) SG48_RS20005 PF01636 Phosphotransferase enzyme family SG48_RS20010 PF01323 DSBA-like thioredoxin domain SG48_RS20015 PF06097 Bacterial protein of unknown function (DUF945) SG48_RS20020 PF01553 Acyltransferase SG48_RS20030 PF01612 3'-5' exonuclease SG48_RS20030 PF00476 DNA polymerase family A SG48_RS20030 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SG48_RS20030 PF01367 5'-3' exonuclease, C-terminal SAM fold SG48_RS20035 PF01926 50S ribosome-binding GTPase SG48_RS20040 PF04220 Der GTPase activator (YihI) SG48_RS20045 PF06969 HemN C-terminal domain SG48_RS20045 PF04055 Radical SAM superfamily SG48_RS20055 PF00158 Sigma-54 interaction domain SG48_RS20055 PF00072 Response regulator receiver domain SG48_RS20055 PF02954 Bacterial regulatory protein, Fis family SG48_RS20060 PF00989 PAS fold SG48_RS20060 PF00512 His Kinase A (phospho-acceptor) domain SG48_RS20060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS20065 PF00120 Glutamine synthetase, catalytic domain SG48_RS20065 PF03951 Glutamine synthetase, beta-Grasp domain SG48_RS20075 PF03144 Elongation factor Tu domain 2 SG48_RS20075 PF00009 Elongation factor Tu GTP binding domain SG48_RS20075 PF00679 Elongation factor G C-terminus SG48_RS20080 PF00392 Bacterial regulatory proteins, gntR family SG48_RS20080 PF07702 UTRA domain SG48_RS20085 PF01261 Xylose isomerase-like TIM barrel SG48_RS20090 PF07690 Major Facilitator Superfamily SG48_RS20095 PF06178 Oligogalacturonate-specific porin protein (KdgM) SG48_RS20110 PF01055 Glycosyl hydrolases family 31 SG48_RS20115 PF01263 Aldose 1-epimerase SG48_RS20125 PF01791 DeoC/LacD family aldolase SG48_RS20130 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SG48_RS20130 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SG48_RS20135 PF00294 pfkB family carbohydrate kinase SG48_RS20140 PF00455 DeoR C terminal sensor domain SG48_RS20140 PF08220 DeoR-like helix-turn-helix domain SG48_RS20145 PF13419 Haloacid dehalogenase-like hydrolase SG48_RS20150 PF03631 Virulence factor BrkB SG48_RS20155 PF02580 D-Tyr-tRNA(Tyr) deacylase SG48_RS20160 PF09500 Putative thioesterase (yiiD_Cterm) SG48_RS20160 PF00583 Acetyltransferase (GNAT) family SG48_RS20165 PF01402 Ribbon-helix-helix protein, copG family SG48_RS20180 PF04216 Protein involved in formate dehydrogenase formation SG48_RS20185 PF01292 Prokaryotic cytochrome b561 SG48_RS20190 PF13247 4Fe-4S dicluster domain SG48_RS20190 PF09163 Formate dehydrogenase N, transmembrane SG48_RS20195 PF00384 Molybdopterin oxidoreductase SG48_RS20195 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SG48_RS20195 PF01568 Molydopterin dinucleotide binding domain SG48_RS20200 PF01568 Molydopterin dinucleotide binding domain SG48_RS20200 PF00384 Molybdopterin oxidoreductase SG48_RS20200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SG48_RS20205 PF02634 FdhD/NarQ family SG48_RS20210 PF12889 Protein of unknown function (DUF3829) SG48_RS20215 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SG48_RS20215 PF08279 HTH domain SG48_RS20220 PF05343 M42 glutamyl aminopeptidase SG48_RS20225 PF02378 Phosphotransferase system, EIIC SG48_RS20225 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SG48_RS20230 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SG48_RS20235 PF05336 L-rhamnose mutarotase SG48_RS20240 PF00596 Class II Aldolase and Adducin N-terminal domain SG48_RS20245 PF06134 L-rhamnose isomerase (RhaA) SG48_RS20250 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SG48_RS20250 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SG48_RS20260 PF12833 Helix-turn-helix domain SG48_RS20260 PF02311 AraC-like ligand binding domain SG48_RS20265 PF12833 Helix-turn-helix domain SG48_RS20265 PF02311 AraC-like ligand binding domain SG48_RS20270 PF06379 L-rhamnose-proton symport protein (RhaT) SG48_RS20275 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SG48_RS20275 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SG48_RS20285 PF03812 2-keto-3-deoxygluconate permease SG48_RS20290 PF03475 3-alpha domain SG48_RS20290 PF03473 MOSC domain SG48_RS20295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS20295 PF16527 Two-component sensor protein CpxA, periplasmic domain SG48_RS20295 PF00512 His Kinase A (phospho-acceptor) domain SG48_RS20295 PF00672 HAMP domain SG48_RS20300 PF00072 Response regulator receiver domain SG48_RS20300 PF00486 Transcriptional regulatory protein, C terminal SG48_RS20305 PF07813 LTXXQ motif family protein SG48_RS20310 PF01545 Cation efflux family SG48_RS20310 PF16916 Dimerisation domain of Zinc Transporter SG48_RS20315 PF00365 Phosphofructokinase SG48_RS20325 PF02611 CDP-diacylglycerol pyrophosphatase SG48_RS20330 PF00121 Triosephosphate isomerase SG48_RS20335 PF07305 Protein of unknown function (DUF1454) SG48_RS20340 PF05656 Protein of unknown function (DUF805) SG48_RS20345 PF04175 Protein of unknown function (DUF406) SG48_RS20350 PF00582 Universal stress protein family SG48_RS20355 PF00970 Oxidoreductase FAD-binding domain SG48_RS20355 PF00175 Oxidoreductase NAD-binding domain SG48_RS20360 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded SG48_RS20365 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SG48_RS20365 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SG48_RS20370 PF00230 Major intrinsic protein SG48_RS20375 PF06005 Cell division protein ZapB SG48_RS20380 PF03737 Aldolase/RraA SG48_RS20385 PF01040 UbiA prenyltransferase family SG48_RS20390 PF10431 C-terminal, D2-small domain, of ClpB protein SG48_RS20390 PF07724 AAA domain (Cdc48 subfamily) SG48_RS20390 PF00004 ATPase family associated with various cellular activities (AAA) SG48_RS20395 PF00227 Proteasome subunit SG48_RS20400 PF05036 Sporulation related domain SG48_RS20405 PF00356 Bacterial regulatory proteins, lacI family SG48_RS20410 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SG48_RS20410 PF17764 3′ DNA-binding domain (3′BD) SG48_RS20410 PF18074 Primosomal protein N C-terminal domain SG48_RS20410 PF00271 Helicase conserved C-terminal domain SG48_RS20410 PF00270 DEAD/DEAH box helicase SG48_RS20415 PF01197 Ribosomal protein L31 SG48_RS20420 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family SG48_RS20425 PF01340 Met Apo-repressor, MetJ SG48_RS20430 PF01053 Cys/Met metabolism PLP-dependent enzyme SG48_RS20435 PF00742 Homoserine dehydrogenase SG48_RS20435 PF00696 Amino acid kinase family SG48_RS20435 PF03447 Homoserine dehydrogenase, NAD binding domain SG48_RS20445 PF02219 Methylenetetrahydrofolate reductase SG48_RS20450 PF00141 Peroxidase SG48_RS20455 PF00892 EamA-like transporter family SG48_RS20460 PF06940 Domain of unknown function (DUF1287) SG48_RS20470 PF00465 Iron-containing alcohol dehydrogenase SG48_RS20475 PF00923 Transaldolase/Fructose-6-phosphate aldolase SG48_RS20480 PF05524 PEP-utilising enzyme, N-terminal SG48_RS20480 PF00391 PEP-utilising enzyme, mobile domain SG48_RS20480 PF00381 PTS HPr component phosphorylation site SG48_RS20480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SG48_RS20480 PF02896 PEP-utilising enzyme, TIM barrel domain SG48_RS20490 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SG48_RS20495 PF01228 Glycine radical SG48_RS20495 PF02901 Pyruvate formate lyase-like SG48_RS20500 PF04055 Radical SAM superfamily SG48_RS20505 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SG48_RS20510 PF12833 Helix-turn-helix domain SG48_RS20515 PF00884 Sulfatase SG48_RS20520 PF00311 Phosphoenolpyruvate carboxylase SG48_RS20530 PF07687 Peptidase dimerisation domain SG48_RS20530 PF01546 Peptidase family M20/M25/M40 SG48_RS20535 PF01118 Semialdehyde dehydrogenase, NAD binding domain SG48_RS20535 PF02774 Semialdehyde dehydrogenase, dimerisation domain SG48_RS20540 PF00696 Amino acid kinase family SG48_RS20545 PF00206 Lyase SG48_RS20545 PF14698 Argininosuccinate lyase C-terminal SG48_RS20550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS20550 PF03466 LysR substrate binding domain SG48_RS20555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SG48_RS20555 PF07992 Pyridine nucleotide-disulphide oxidoreductase SG48_RS20560 PF00440 Bacterial regulatory proteins, tetR family SG48_RS20565 PF07226 Protein of unknown function (DUF1422) SG48_RS20570 PF05958 tRNA (Uracil-5-)-methyltransferase SG48_RS20575 PF00593 TonB dependent receptor SG48_RS20575 PF07715 TonB-dependent Receptor Plug Domain SG48_RS20580 PF01177 Asp/Glu/Hydantoin racemase SG48_RS20605 PF01565 FAD binding domain SG48_RS20605 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SG48_RS20610 PF02237 Biotin protein ligase C terminal domain SG48_RS20610 PF03099 Biotin/lipoate A/B protein ligase family SG48_RS20610 PF08279 HTH domain SG48_RS20615 PF00485 Phosphoribulokinase / Uridine kinase family SG48_RS20645 PF03143 Elongation factor Tu C-terminal domain SG48_RS20645 PF03144 Elongation factor Tu domain 2 SG48_RS20645 PF00009 Elongation factor Tu GTP binding domain SG48_RS20650 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SG48_RS20655 PF02357 Transcription termination factor nusG SG48_RS20655 PF00467 KOW motif SG48_RS20660 PF03946 Ribosomal protein L11, N-terminal domain SG48_RS20660 PF00298 Ribosomal protein L11, RNA binding domain SG48_RS20665 PF00687 Ribosomal protein L1p/L10e family SG48_RS20670 PF00466 Ribosomal protein L10 SG48_RS20675 PF16320 Ribosomal protein L7/L12 dimerisation domain SG48_RS20675 PF00542 Ribosomal protein L7/L12 C-terminal domain SG48_RS20680 PF04565 RNA polymerase Rpb2, domain 3 SG48_RS20680 PF10385 RNA polymerase beta subunit external 1 domain SG48_RS20680 PF04563 RNA polymerase beta subunit SG48_RS20680 PF04561 RNA polymerase Rpb2, domain 2 SG48_RS20680 PF04560 RNA polymerase Rpb2, domain 7 SG48_RS20680 PF00562 RNA polymerase Rpb2, domain 6 SG48_RS20685 PF04998 RNA polymerase Rpb1, domain 5 SG48_RS20685 PF05000 RNA polymerase Rpb1, domain 4 SG48_RS20685 PF04983 RNA polymerase Rpb1, domain 3 SG48_RS20685 PF00623 RNA polymerase Rpb1, domain 2 SG48_RS20685 PF04997 RNA polymerase Rpb1, domain 1 SG48_RS20695 PF06968 Biotin and Thiamin Synthesis associated domain SG48_RS20695 PF04055 Radical SAM superfamily SG48_RS20700 PF05690 Thiazole biosynthesis protein ThiG SG48_RS20705 PF02597 ThiS family SG48_RS20710 PF00899 ThiF family SG48_RS20715 PF02581 Thiamine monophosphate synthase SG48_RS20720 PF13667 ThiC-associated domain SG48_RS20720 PF01964 Radical SAM ThiC family SG48_RS20725 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ SG48_RS20730 PF09297 NADH pyrophosphatase zinc ribbon domain SG48_RS20730 PF00293 NUDIX domain SG48_RS20735 PF01208 Uroporphyrinogen decarboxylase (URO-D) SG48_RS20740 PF04493 Endonuclease V SG48_RS20745 PF04222 Protein of unknown function (DUF416) SG48_RS20750 PF00216 Bacterial DNA-binding protein SG48_RS20755 PF07356 Protein of unknown function (DUF1481) SG48_RS20760 PF13801 Heavy-metal resistance SG48_RS20765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS20765 PF00512 His Kinase A (phospho-acceptor) domain SG48_RS20770 PF00158 Sigma-54 interaction domain SG48_RS20770 PF00072 Response regulator receiver domain SG48_RS20770 PF02954 Bacterial regulatory protein, Fis family SG48_RS20775 PF02844 Phosphoribosylglycinamide synthetase, N domain SG48_RS20775 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SG48_RS20775 PF02843 Phosphoribosylglycinamide synthetase, C domain SG48_RS20780 PF01808 AICARFT/IMPCHase bienzyme SG48_RS20780 PF02142 MGS-like domain SG48_RS20790 PF13673 Acetyltransferase (GNAT) domain SG48_RS20795 PF04204 Homoserine O-succinyltransferase SG48_RS20800 PF01274 Malate synthase SG48_RS20805 PF00463 Isocitrate lyase family SG48_RS20810 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) SG48_RS20815 PF07906 ShET2 enterotoxin, N-terminal region SG48_RS20820 PF01614 Bacterial transcriptional regulator SG48_RS20820 PF09339 IclR helix-turn-helix domain SG48_RS20825 PF02574 Homocysteine S-methyltransferase SG48_RS20825 PF02607 B12 binding domain SG48_RS20825 PF02965 Vitamin B12 dependent methionine synthase, activation domain SG48_RS20825 PF00809 Pterin binding enzyme SG48_RS20825 PF02310 B12 binding domain SG48_RS20830 PF02690 Na+/Pi-cotransporter SG48_RS20835 PF03575 Peptidase family S51 SG48_RS20840 PF01479 S4 domain SG48_RS20840 PF00849 RNA pseudouridylate synthase SG48_RS20845 PF11656 YjbD family (DUF3811) SG48_RS20850 PF01842 ACT domain SG48_RS20850 PF00696 Amino acid kinase family SG48_RS20855 PF00342 Phosphoglucose isomerase SG48_RS20860 PF11106 Exopolysaccharide production protein YjbE SG48_RS20865 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF SG48_RS20870 PF06251 Capsule biosynthesis GfcC SG48_RS20875 PF06082 Exopolysaccharide biosynthesis protein YbjH SG48_RS20880 PF17089 Uncharacterised protein family SG48_RS20890 PF06146 Phosphate-starvation-inducible E SG48_RS20895 PF00083 Sugar (and other) transporter SG48_RS20900 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS20905 PF00528 Binding-protein-dependent transport system inner membrane component SG48_RS20905 PF14785 Maltose transport system permease protein MalF P2 domain SG48_RS20910 PF01547 Bacterial extracellular solute-binding protein SG48_RS20920 PF17912 MalK OB fold domain SG48_RS20920 PF00005 ABC transporter SG48_RS20925 PF02264 LamB porin SG48_RS20930 PF07148 Maltose operon periplasmic protein precursor (MalM) SG48_RS20940 PF13981 SopA-like central domain SG48_RS20940 PF13599 Pentapeptide repeats (9 copies) SG48_RS20945 PF04345 Chorismate lyase SG48_RS20950 PF01040 UbiA prenyltransferase family SG48_RS20955 PF01553 Acyltransferase SG48_RS20960 PF01219 Prokaryotic diacylglycerol kinase SG48_RS20965 PF00717 Peptidase S24-like SG48_RS20965 PF01726 LexA DNA binding domain SG48_RS20970 PF01554 MatE SG48_RS20975 PF05532 CsbD-like SG48_RS20980 PF01475 Ferric uptake regulator family SG48_RS20990 PF10897 Protein of unknown function (DUF2713) SG48_RS20995 PF01207 Dihydrouridine synthase (Dus) SG48_RS21000 PF09583 Phage shock protein G (Phageshock_PspG) SG48_RS21005 PF00107 Zinc-binding dehydrogenase SG48_RS21005 PF08240 Alcohol dehydrogenase GroES-like domain SG48_RS21010 PF03796 DnaB-like helicase C terminal domain SG48_RS21010 PF00772 DnaB-like helicase N terminal domain SG48_RS21015 PF01168 Alanine racemase, N-terminal domain SG48_RS21015 PF00842 Alanine racemase, C-terminal domain SG48_RS21020 PF00155 Aminotransferase class I and II SG48_RS21030 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) SG48_RS21035 PF01894 Uncharacterised protein family UPF0047 SG48_RS21040 PF04237 YjbR SG48_RS21045 PF17760 UvrA interaction domain SG48_RS21045 PF17755 UvrA DNA-binding domain SG48_RS21045 PF00005 ABC transporter SG48_RS21050 PF00436 Single-strand binding protein family SG48_RS21055 PF15940 Family of unknown function SG48_RS21060 PF00563 EAL domain SG48_RS21060 PF12792 CSS motif domain associated with EAL SG48_RS21065 PF12833 Helix-turn-helix domain SG48_RS21070 PF00376 MerR family regulatory protein SG48_RS21070 PF09278 MerR, DNA binding SG48_RS21075 PF00860 Permease family SG48_RS21080 PF00999 Sodium/hydrogen exchanger family SG48_RS21085 PF00805 Pentapeptide repeats (8 copies) SG48_RS21090 PF00474 Sodium:solute symporter family SG48_RS21095 PF04341 Protein of unknown function, DUF485 SG48_RS21100 PF13193 AMP-binding enzyme C-terminal domain SG48_RS21100 PF16177 Acetyl-coenzyme A synthetase N-terminus SG48_RS21100 PF00501 AMP-binding enzyme SG48_RS21105 PF02335 Cytochrome c552 SG48_RS21110 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) SG48_RS21110 PF13435 Cytochrome c554 and c-prime SG48_RS21115 PF13247 4Fe-4S dicluster domain SG48_RS21115 PF00037 4Fe-4S binding domain SG48_RS21120 PF03916 Polysulphide reductase, NrfD SG48_RS21125 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal SG48_RS21125 PF01578 Cytochrome C assembly protein SG48_RS21130 PF03918 Cytochrome C biogenesis protein SG48_RS21140 PF00375 Sodium:dicarboxylate symporter family SG48_RS21145 PF08238 Sel1 repeat SG48_RS21150 PF00384 Molybdopterin oxidoreductase SG48_RS21150 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SG48_RS21150 PF01568 Molydopterin dinucleotide binding domain SG48_RS21155 PF01568 Molydopterin dinucleotide binding domain SG48_RS21155 PF00384 Molybdopterin oxidoreductase SG48_RS21155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SG48_RS21160 PF02321 Outer membrane efflux protein SG48_RS21165 PF04632 Fusaric acid resistance protein family SG48_RS21170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SG48_RS21170 PF00529 HlyD membrane-fusion protein of T1SS SG48_RS21175 PF17090 Uncharacterised protein family SG48_RS21180 PF14863 Alkyl sulfatase dimerisation SG48_RS21180 PF00753 Metallo-beta-lactamase superfamily SG48_RS21180 PF14864 Alkyl sulfatase C-terminal SG48_RS21185 PF00480 ROK family SG48_RS21190 PF00834 Ribulose-phosphate 3 epimerase family SG48_RS21195 PF02653 Branched-chain amino acid transport system / permease component SG48_RS21200 PF00005 ABC transporter SG48_RS21205 PF13407 Periplasmic binding protein domain SG48_RS21210 PF01418 Helix-turn-helix domain, rpiR family SG48_RS21210 PF01380 SIS domain SG48_RS21215 PF02502 Ribose/Galactose Isomerase SG48_RS21225 PF12706 Beta-lactamase superfamily domain SG48_RS21230 PF00583 Acetyltransferase (GNAT) family SG48_RS21240 PF07969 Amidohydrolase family SG48_RS21245 PF00005 ABC transporter SG48_RS21250 PF00005 ABC transporter SG48_RS21255 PF06007 Phosphonate metabolism protein PhnJ SG48_RS21260 PF05861 Bacterial phosphonate metabolism protein (PhnI) SG48_RS21265 PF05845 Bacterial phosphonate metabolism protein (PhnH) SG48_RS21270 PF06754 Phosphonate metabolism protein PhnG SG48_RS21275 PF00392 Bacterial regulatory proteins, gntR family SG48_RS21275 PF07702 UTRA domain SG48_RS21290 PF00005 ABC transporter SG48_RS21295 PF06983 3-demethylubiquinone-9 3-methyltransferase SG48_RS21300 PF03831 PhnA domain SG48_RS21300 PF08274 PhnA Zinc-Ribbon SG48_RS21305 PF00350 Dynamin family SG48_RS21310 PF13990 YjcZ-like protein SG48_RS21315 PF08946 Osmosensory transporter coiled coil SG48_RS21315 PF00083 Sugar (and other) transporter SG48_RS21325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS21325 PF00512 His Kinase A (phospho-acceptor) domain SG48_RS21330 PF00072 Response regulator receiver domain SG48_RS21330 PF00486 Transcriptional regulatory protein, C terminal SG48_RS21335 PF00884 Sulfatase SG48_RS21335 PF08019 Phosphoethanolamine transferase EptA/EptB SG48_RS21340 PF13520 Amino acid permease SG48_RS21345 PF12833 Helix-turn-helix domain SG48_RS21350 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain SG48_RS21350 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SG48_RS21350 PF01276 Orn/Lys/Arg decarboxylase, major domain SG48_RS21355 PF12833 Helix-turn-helix domain SG48_RS21365 PF11975 Family 4 glycosyl hydrolase C-terminal domain SG48_RS21365 PF02056 Family 4 glycosyl hydrolase SG48_RS21375 PF09997 Predicted membrane protein (DUF2238) SG48_RS21380 PF05683 Fumarase C-terminus SG48_RS21380 PF05681 Fumarate hydratase (Fumerase) SG48_RS21385 PF03605 Anaerobic c4-dicarboxylate membrane transporter SG48_RS21395 PF00072 Response regulator receiver domain SG48_RS21400 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SG48_RS21400 PF17203 Single cache domain 3 SG48_RS21400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS21400 PF00989 PAS fold SG48_RS21405 PF06902 Divergent 4Fe-4S mono-cluster SG48_RS21410 PF14542 GCN5-related N-acetyl-transferase SG48_RS21420 PF11080 Endoribonuclease GhoS SG48_RS21425 PF10753 Toxin GhoT_OrtT SG48_RS21430 PF01336 OB-fold nucleic acid binding domain SG48_RS21430 PF00152 tRNA synthetases class II (D, K and N) SG48_RS21435 PF00854 POT family SG48_RS21440 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SG48_RS21440 PF01276 Orn/Lys/Arg decarboxylase, major domain SG48_RS21440 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain SG48_RS21445 PF13520 Amino acid permease SG48_RS21450 PF00486 Transcriptional regulatory protein, C terminal SG48_RS21450 PF18500 CadC C-terminal domain 1 SG48_RS21465 PF02683 Cytochrome C biogenesis protein transmembrane region SG48_RS21465 PF11412 Disulphide bond corrector protein DsbC SG48_RS21470 PF03091 CutA1 divalent ion tolerance protein SG48_RS21475 PF03605 Anaerobic c4-dicarboxylate membrane transporter SG48_RS21480 PF00206 Lyase SG48_RS21480 PF10415 Fumarase C C-terminus SG48_RS21485 PF04186 FxsA cytoplasmic membrane protein SG48_RS21490 PF13520 Amino acid permease SG48_RS21495 PF00166 Chaperonin 10 Kd subunit SG48_RS21500 PF00118 TCP-1/cpn60 chaperonin family SG48_RS21505 PF13698 Domain of unknown function (DUF4156) SG48_RS21510 PF15922 YjeJ-like SG48_RS21515 PF04055 Radical SAM superfamily SG48_RS21520 PF01132 Elongation factor P (EF-P) OB domain SG48_RS21520 PF08207 Elongation factor P (EF-P) KOW-like domain SG48_RS21520 PF09285 Elongation factor P, C-terminal SG48_RS21525 PF08085 Entericidin EcnA/B family SG48_RS21530 PF08085 Entericidin EcnA/B family SG48_RS21535 PF00893 Small Multidrug Resistance protein SG48_RS21540 PF08212 Lipocalin-like domain SG48_RS21545 PF00144 Beta-lactamase SG48_RS21550 PF02313 Fumarate reductase subunit D SG48_RS21555 PF02300 Fumarate reductase subunit C SG48_RS21560 PF13183 4Fe-4S dicluster domain SG48_RS21560 PF13085 2Fe-2S iron-sulfur cluster binding domain SG48_RS21565 PF02910 Fumarate reductase flavoprotein C-term SG48_RS21565 PF00890 FAD binding domain SG48_RS21570 PF00152 tRNA synthetases class II (D, K and N) SG48_RS21575 PF13520 Amino acid permease SG48_RS21585 PF10840 Protein of unknown function (DUF2645) SG48_RS21590 PF12794 Mechanosensitive ion channel inner membrane domain 1 SG48_RS21590 PF12795 Mechanosensitive ion channel porin domain SG48_RS21590 PF00924 Mechanosensitive ion channel SG48_RS21595 PF02666 Phosphatidylserine decarboxylase SG48_RS21600 PF03193 RsgA GTPase SG48_RS21605 PF00929 Exonuclease SG48_RS21625 PF08331 Domain of unknown function (DUF1730) SG48_RS21630 PF03853 YjeF-related protein N-terminus SG48_RS21630 PF01256 Carbohydrate kinase SG48_RS21635 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SG48_RS21640 PF01520 N-acetylmuramoyl-L-alanine amidase SG48_RS21645 PF08676 MutL C terminal dimerisation domain SG48_RS21645 PF01119 DNA mismatch repair protein, C-terminal domain SG48_RS21655 PF17209 Hfq protein SG48_RS21660 PF16360 GTP-binding GTPase Middle Region SG48_RS21660 PF13167 GTP-binding GTPase N-terminal SG48_RS21660 PF01926 50S ribosome-binding GTPase SG48_RS21665 PF01145 SPFH domain / Band 7 family SG48_RS21665 PF12221 Bacterial membrane protein N terminal SG48_RS21670 PF01145 SPFH domain / Band 7 family SG48_RS21675 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) SG48_RS21680 PF00709 Adenylosuccinate synthetase SG48_RS21685 PF02082 Transcriptional regulator SG48_RS21690 PF17876 Cold shock domain SG48_RS21690 PF00575 S1 RNA binding domain SG48_RS21690 PF08461 Ribonuclease R winged-helix domain SG48_RS21690 PF00773 RNB domain SG48_RS21690 PF08206 Ribonuclease B OB domain SG48_RS21695 PF08032 RNA 2'-O ribose methyltransferase substrate binding SG48_RS21695 PF00588 SpoU rRNA Methylase family SG48_RS21700 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) SG48_RS21705 PF04012 PspA/IM30 family SG48_RS21710 PF10679 Protein of unknown function (DUF2491) SG48_RS21715 PF03994 Domain of Unknown Function (DUF350) SG48_RS21720 PF06693 Protein of unknown function (DUF1190) SG48_RS21725 PF03738 Glutathionylspermidine synthase preATP-grasp SG48_RS21730 PF18158 Adaptive response protein AidB N-terminal domain SG48_RS21730 PF02770 Acyl-CoA dehydrogenase, middle domain SG48_RS21730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SG48_RS21735 PF07338 Protein of unknown function (DUF1471) SG48_RS21740 PF07338 Protein of unknown function (DUF1471) SG48_RS21745 PF00326 Prolyl oligopeptidase family SG48_RS21750 PF00455 DeoR C terminal sensor domain SG48_RS21750 PF08220 DeoR-like helix-turn-helix domain SG48_RS21760 PF03611 PTS system sugar-specific permease component SG48_RS21765 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SG48_RS21770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SG48_RS21775 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SG48_RS21780 PF01261 Xylose isomerase-like TIM barrel SG48_RS21785 PF00596 Class II Aldolase and Adducin N-terminal domain SG48_RS21790 PF07338 Protein of unknown function (DUF1471) SG48_RS21800 PF01250 Ribosomal protein S6 SG48_RS21805 PF00436 Single-strand binding protein family SG48_RS21810 PF01084 Ribosomal protein S18 SG48_RS21815 PF01281 Ribosomal protein L9, N-terminal domain SG48_RS21815 PF03948 Ribosomal protein L9, C-terminal domain SG48_RS21820 PF10887 Protein of unknown function (DUF2686) SG48_RS21825 PF17938 Tetracyclin repressor-like, C-terminal domain SG48_RS21830 PF04225 Opacity-associated protein A LysM-like domain SG48_RS21830 PF08525 Opacity-associated protein A N-terminal motif SG48_RS21835 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase SG48_RS21835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SG48_RS21840 PF00324 Amino acid permease SG48_RS21845 PF04405 Domain of Unknown function (DUF542) SG48_RS21845 PF01814 Hemerythrin HHE cation binding domain SG48_RS21850 PF00892 EamA-like transporter family SG48_RS21855 PF05368 NmrA-like family SG48_RS21860 PF01638 HxlR-like helix-turn-helix SG48_RS21865 PF00149 Calcineurin-like phosphoesterase SG48_RS21865 PF02872 5'-nucleotidase, C-terminal domain SG48_RS21870 PF00459 Inositol monophosphatase family SG48_RS21880 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) SG48_RS21885 PF06526 Protein of unknown function (DUF1107) SG48_RS21890 PF00571 CBS domain SG48_RS21890 PF03471 Transporter associated domain SG48_RS21890 PF01595 Cyclin M transmembrane N-terminal domain SG48_RS21895 PF01625 Peptide methionine sulfoxide reductase SG48_RS21905 PF07244 Surface antigen variable number repeat SG48_RS21905 PF01103 Surface antigen SG48_RS21905 PF17243 POTRA domain TamA domain 1 SG48_RS21910 PF04357 TamB, inner membrane protein subunit of TAM complex SG48_RS21915 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like SG48_RS21920 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin SG48_RS21925 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system SG48_RS21930 PF00719 Inorganic pyrophosphatase SG48_RS21935 PF13407 Periplasmic binding protein domain SG48_RS21940 PF00005 ABC transporter SG48_RS21945 PF02653 Branched-chain amino acid transport system / permease component SG48_RS21950 PF02653 Branched-chain amino acid transport system / permease component SG48_RS21955 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain SG48_RS21960 PF01225 Mur ligase family, catalytic domain SG48_RS21960 PF08245 Mur ligase middle domain SG48_RS21960 PF02875 Mur ligase family, glutamate ligase domain SG48_RS21965 PF04751 Protein of unknown function (DUF615) SG48_RS21970 PF01523 Putative modulator of DNA gyrase SG48_RS21975 PF07361 Cytochrome b562 SG48_RS21985 PF13597 Anaerobic ribonucleoside-triphosphate reductase SG48_RS21985 PF03477 ATP cone domain SG48_RS21990 PF00128 Alpha amylase, catalytic domain SG48_RS21990 PF11941 Domain of unknown function (DUF3459) SG48_RS21995 PF02378 Phosphotransferase system, EIIC SG48_RS21995 PF00367 phosphotransferase system, EIIB SG48_RS22000 PF00356 Bacterial regulatory proteins, lacI family SG48_RS22005 PF00689 Cation transporting ATPase, C-terminus SG48_RS22005 PF00690 Cation transporter/ATPase, N-terminus SG48_RS22010 PF01042 Endoribonuclease L-PSP SG48_RS22015 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain SG48_RS22015 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain SG48_RS22020 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SG48_RS22020 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SG48_RS22025 PF08052 PyrBI operon leader peptide SG48_RS22035 PF01042 Endoribonuclease L-PSP SG48_RS22045 PF00440 Bacterial regulatory proteins, tetR family SG48_RS22050 PF04074 YhcH/YjgK/YiaL SG48_RS22060 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SG48_RS22060 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SG48_RS22065 PF06877 Regulator of ribonuclease activity B SG48_RS22070 PF00583 Acetyltransferase (GNAT) family SG48_RS22075 PF05987 Bacterial protein of unknown function (DUF898) SG48_RS22080 PF10458 Valyl tRNA synthetase tRNA binding arm SG48_RS22080 PF00133 tRNA synthetases class I (I, L, M and V) SG48_RS22080 PF08264 Anticodon-binding domain of tRNA SG48_RS22085 PF04364 DNA polymerase III chi subunit, HolC SG48_RS22090 PF02789 Cytosol aminopeptidase family, N-terminal domain SG48_RS22090 PF00883 Cytosol aminopeptidase family, catalytic domain SG48_RS22095 PF03739 Lipopolysaccharide export system permease LptF/LptG SG48_RS22100 PF03739 Lipopolysaccharide export system permease LptF/LptG SG48_RS22105 PF05872 Bacterial protein of unknown function (DUF853) SG48_RS22110 PF00356 Bacterial regulatory proteins, lacI family SG48_RS22115 PF02447 GntP family permease SG48_RS22120 PF00106 short chain dehydrogenase SG48_RS22125 PF00107 Zinc-binding dehydrogenase SG48_RS22125 PF08240 Alcohol dehydrogenase GroES-like domain SG48_RS22130 PF01202 Shikimate kinase SG48_RS22135 PF00107 Zinc-binding dehydrogenase SG48_RS22135 PF08240 Alcohol dehydrogenase GroES-like domain SG48_RS22145 PF00589 Phage integrase family SG48_RS22145 PF13356 Arm DNA-binding domain SG48_RS22150 PF01527 Transposase SG48_RS22155 PF13276 HTH-like domain SG48_RS22155 PF00665 Integrase core domain SG48_RS22185 PF01609 Transposase DDE domain SG48_RS22185 PF13006 Insertion element 4 transposase N-terminal SG48_RS22190 PF07690 Major Facilitator Superfamily SG48_RS22195 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SG48_RS22195 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SG48_RS22200 PF16747 Surface-adhesin protein E SG48_RS22205 PF11700 Vacuole effluxer Atg22 like SG48_RS22210 PF01527 Transposase SG48_RS22215 PF00665 Integrase core domain SG48_RS22215 PF13936 Helix-turn-helix domain SG48_RS22220 PF01527 Transposase SG48_RS22235 PF00005 ABC transporter SG48_RS22240 PF01032 FecCD transport family SG48_RS22245 PF01032 FecCD transport family SG48_RS22250 PF01497 Periplasmic binding protein SG48_RS22255 PF07715 TonB-dependent Receptor Plug Domain SG48_RS22255 PF07660 Secretin and TonB N terminus short domain SG48_RS22255 PF00593 TonB dependent receptor SG48_RS22260 PF04773 FecR protein SG48_RS22260 PF16220 Domain of unknown function (DUF4880) SG48_RS22265 PF08281 Sigma-70, region 4 SG48_RS22265 PF04542 Sigma-70 region 2 SG48_RS22275 PF03400 IS1 transposase SG48_RS22280 PF03400 IS1 transposase SG48_RS22285 PF04198 Putative sugar-binding domain SG48_RS22295 PF02447 GntP family permease SG48_RS22300 PF00920 Dehydratase family SG48_RS22305 PF00701 Dihydrodipicolinate synthetase family SG48_RS22310 PF01614 Bacterial transcriptional regulator SG48_RS22315 PF00455 DeoR C terminal sensor domain SG48_RS22315 PF08220 DeoR-like helix-turn-helix domain SG48_RS22320 PF00834 Ribulose-phosphate 3 epimerase family SG48_RS22325 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SG48_RS22330 PF03437 BtpA family SG48_RS22335 PF03611 PTS system sugar-specific permease component SG48_RS22340 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SG48_RS22345 PF05343 M42 glutamyl aminopeptidase SG48_RS22350 PF13847 Methyltransferase domain SG48_RS22355 PF00583 Acetyltransferase (GNAT) family SG48_RS22360 PF09857 Putative toxin of bacterial toxin-antitoxin pair SG48_RS22375 PF13091 PLD-like domain SG48_RS22375 PF13087 AAA domain SG48_RS22380 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase SG48_RS22390 PF06178 Oligogalacturonate-specific porin protein (KdgM) SG48_RS22405 PF00589 Phage integrase family SG48_RS22410 PF00589 Phage integrase family SG48_RS22420 PF00419 Fimbrial protein SG48_RS22425 PF00419 Fimbrial protein SG48_RS22430 PF02753 Pili assembly chaperone PapD, C-terminal domain SG48_RS22430 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain SG48_RS22435 PF13953 PapC C-terminal domain SG48_RS22435 PF00577 Outer membrane usher protein SG48_RS22435 PF13954 PapC N-terminal domain SG48_RS22440 PF00419 Fimbrial protein SG48_RS22450 PF00419 Fimbrial protein SG48_RS22450 PF09160 FimH, mannose binding SG48_RS22455 PF02447 GntP family permease SG48_RS22465 PF03786 D-mannonate dehydratase (UxuA) SG48_RS22470 PF01232 Mannitol dehydrogenase Rossmann domain SG48_RS22470 PF08125 Mannitol dehydrogenase C-terminal domain SG48_RS22480 PF07729 FCD domain SG48_RS22480 PF00392 Bacterial regulatory proteins, gntR family SG48_RS22485 PF10887 Protein of unknown function (DUF2686) SG48_RS22505 PF04965 Gene 25-like lysozyme SG48_RS22510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SG48_RS22510 PF03466 LysR substrate binding domain SG48_RS22515 PF01979 Amidohydrolase family SG48_RS22520 PF07670 Nucleoside recognition SG48_RS22525 PF07670 Nucleoside recognition SG48_RS22530 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family SG48_RS22535 PF06779 Uncharacterised MFS-type transporter YbfB SG48_RS22540 PF06977 SdiA-regulated SG48_RS22545 PF11823 Protein of unknown function (DUF3343) SG48_RS22550 PF01869 BadF/BadG/BcrA/BcrD ATPase family SG48_RS22555 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component SG48_RS22560 PF04286 Protein of unknown function (DUF445) SG48_RS22565 PF07690 Major Facilitator Superfamily SG48_RS22575 PF00155 Aminotransferase class I and II SG48_RS22575 PF00392 Bacterial regulatory proteins, gntR family SG48_RS22580 PF06568 Domain of unknown function (DUF1127) SG48_RS22595 PF10117 McrBC 5-methylcytosine restriction system component SG48_RS22600 PF12102 Domain of unknown function (DUF3578) SG48_RS22600 PF07728 AAA domain (dynein-related subfamily) SG48_RS22605 PF08845 Toxin SymE, type I toxin-antitoxin system SG48_RS22610 PF01420 Type I restriction modification DNA specificity domain SG48_RS22615 PF02384 N-6 DNA Methylase SG48_RS22620 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SG48_RS22620 PF04851 Type III restriction enzyme, res subunit SG48_RS22620 PF08463 EcoEI R protein C-terminal SG48_RS22620 PF00271 Helicase conserved C-terminal domain SG48_RS22625 PF14338 Mrr N-terminal domain SG48_RS22625 PF04471 Restriction endonuclease SG48_RS22630 PF02492 CobW/HypB/UreG, nucleotide-binding domain SG48_RS22630 PF07683 Cobalamin synthesis protein cobW C-terminal domain SG48_RS22635 PF04328 Selenoprotein, putative SG48_RS22640 PF13722 5TM C-terminal transporter carbon starvation CstA SG48_RS22640 PF02554 Carbon starvation protein CstA SG48_RS22650 PF00672 HAMP domain SG48_RS22650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain SG48_RS22650 PF02203 Tar ligand binding domain homologue SG48_RS22655 PF07690 Major Facilitator Superfamily SG48_RS22660 PF07729 FCD domain SG48_RS22660 PF00392 Bacterial regulatory proteins, gntR family SG48_RS22665 PF08240 Alcohol dehydrogenase GroES-like domain SG48_RS22665 PF00107 Zinc-binding dehydrogenase SG48_RS22670 PF00884 Sulfatase SG48_RS22675 PF10696 Protein of unknown function (DUF2501) SG48_RS22680 PF01695 IstB-like ATP binding protein SG48_RS22685 PF17948 DnaT DNA-binding domain SG48_RS22690 PF12821 Threonine/Serine exporter, ThrE SG48_RS22695 PF06738 Putative threonine/serine exporter SG48_RS22700 PF00196 Bacterial regulatory proteins, luxR family SG48_RS22705 PF00196 Bacterial regulatory proteins, luxR family SG48_RS22710 PF11575 FhuF 2Fe-2S C-terminal domain SG48_RS22710 PF06276 Ferric iron reductase FhuF-like transporter SG48_RS22715 PF07256 Protein of unknown function (DUF1435) SG48_RS22735 PF05175 Methyltransferase small domain SG48_RS22735 PF08468 Methyltransferase small domain N-terminal SG48_RS22740 PF03603 DNA polymerase III psi subunit SG48_RS22745 PF00583 Acetyltransferase (GNAT) family SG48_RS22750 PF13419 Haloacid dehalogenase-like hydrolase SG48_RS22755 PF03144 Elongation factor Tu domain 2 SG48_RS22755 PF16658 Class II release factor RF3, C-terminal domain SG48_RS22755 PF00009 Elongation factor Tu GTP binding domain SG48_RS22760 PF04972 BON domain SG48_RS22765 PF07043 Protein of unknown function (DUF1328) SG48_RS22770 PF01734 Patatin-like phospholipase SG48_RS22775 PF01026 TatD related DNase SG48_RS22780 PF04055 Radical SAM superfamily SG48_RS22785 PF11230 Protein of unknown function (DUF3029) SG48_RS22795 PF01791 DeoC/LacD family aldolase SG48_RS22800 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SG48_RS22800 PF00591 Glycosyl transferase family, a/b domain SG48_RS22800 PF02885 Glycosyl transferase family, helical bundle domain SG48_RS22805 PF01676 Metalloenzyme superfamily SG48_RS22810 PF01048 Phosphorylase superfamily SG48_RS22815 PF07804 HipA-like C-terminal domain SG48_RS22820 PF10437 Bacterial lipoate protein ligase C-terminus SG48_RS22820 PF03099 Biotin/lipoate A/B protein ligase family SG48_RS22825 PF10144 Bacterial virulence factor haemolysin SG48_RS22830 PF18429 Domain of unknown function (DUF5609) SG48_RS22835 PF18073 Rubredoxin metal binding domain SG48_RS22840 PF13521 AAA domain SG48_RS22840 PF01381 Helix-turn-helix SG48_RS22850 PF12848 ABC transporter SG48_RS22850 PF00005 ABC transporter SG48_RS22855 PF14718 Soluble lytic murein transglycosylase L domain SG48_RS22855 PF01464 Transglycosylase SLT domain SG48_RS22860 PF01371 Trp repressor protein SG48_RS22865 PF01931 Protein of unknown function DUF84 SG48_RS22870 PF00300 Histidine phosphatase superfamily (branch 1) SG48_RS22875 PF06445 GyrI-like small molecule binding domain SG48_RS22875 PF12833 Helix-turn-helix domain SG48_RS22880 PF05981 CreA protein SG48_RS22885 PF00486 Transcriptional regulatory protein, C terminal SG48_RS22885 PF00072 Response regulator receiver domain SG48_RS22890 PF00512 His Kinase A (phospho-acceptor) domain SG48_RS22890 PF00672 HAMP domain SG48_RS22890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SG48_RS22895 PF06123 Inner membrane protein CreD SG48_RS22900 PF00072 Response regulator receiver domain SG48_RS22900 PF00486 Transcriptional regulatory protein, C terminal SG48_RS22910 PF00588 SpoU rRNA Methylase family SG48_RS22970 PF07151 Protein of unknown function (DUF1391)