SG48_RS00050	SM00852	Probable molybdopterin binding domain
SG48_RS00075	SM00271	DnaJ molecular chaperone homology domain
SG48_RS00120	SM00904	Riboflavin kinase
SG48_RS00165	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
SG48_RS00170	SM00851	MGS-like domain
SG48_RS00170	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
SG48_RS00215	SM00893	Electron transfer flavoprotein domain
SG48_RS00220	SM00893	Electron transfer flavoprotein domain
SG48_RS00265	SM00650	Ribosomal RNA adenine dimethylases
SG48_RS00285	SM00271	DnaJ molecular chaperone homology domain
SG48_RS00300	SM00487	DEAD-like helicases superfamily
SG48_RS00300	SM00490	helicase superfamily c-terminal domain
SG48_RS00305	SM00486	DNA polymerase type-B family
SG48_RS00310	SM01007	Class II Aldolase and Adducin N-terminal domain
SG48_RS00325	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS00335	SM00382	ATPases associated with a variety of cellular activities
SG48_RS00375	SM01329	SG48_RS00375
SG48_RS00380	SM00917	LeuA allosteric (dimerisation) domain
SG48_RS00410	SM00354	helix_turn _helix lactose operon repressor
SG48_RS00480	SM00842	Cell division protein FtsA
SG48_RS00485	SM00864	Tubulin/FtsZ family, GTPase domain
SG48_RS00485	SM00865	Tubulin/FtsZ family, C-terminal domain
SG48_RS00500	SM00957	SecA DEAD-like domain
SG48_RS00500	SM00958	SecA preprotein cross-linking domain
SG48_RS00530	SM01240	SG48_RS00530
SG48_RS00560	SM00644	SG48_RS00560
SG48_RS00575	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SG48_RS00575	SM00895	SG48_RS00575
SG48_RS00630	SM00564	beta-propeller repeat
SG48_RS00640	SM00947	Carbonic anhydrase
SG48_RS00645	SM00382	ATPases associated with a variety of cellular activities
SG48_RS00750	SM00487	DEAD-like helicases superfamily
SG48_RS00750	SM00490	helicase superfamily c-terminal domain
SG48_RS00750	SM00847	Helicase associated domain (HA2)  Add an annotation
SG48_RS00770	SM00382	ATPases associated with a variety of cellular activities
SG48_RS00815	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SG48_RS00820	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SG48_RS00845	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SG48_RS00890	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SG48_RS00900	SM00935	Outer membrane protein (OmpH-like)
SG48_RS00930	SM00481	DNA polymerase alpha chain like domain
SG48_RS00950	SM00977	TilS substrate C-terminal domain
SG48_RS00965	SM01322	SG48_RS00965
SG48_RS01010	SM00382	ATPases associated with a variety of cellular activities
SG48_RS01010	SM00930	SG48_RS01010
SG48_RS01070	SM00257	Lysin motif
SG48_RS01075	SM00849	Metallo-beta-lactamase superfamily
SG48_RS01090	SM00479	SG48_RS01090
SG48_RS01165	SM01321	SG48_RS01165
SG48_RS01235	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
SG48_RS01350	SM00382	ATPases associated with a variety of cellular activities
SG48_RS01385	SM01130	SG48_RS01385
SG48_RS01405	SM00346	helix_turn_helix isocitrate lyase regulation
SG48_RS01470	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SG48_RS01475	SM01092	CO dehydrogenase flavoprotein C-terminal domain
SG48_RS01520	SM00421	helix_turn_helix, Lux Regulon
SG48_RS01560	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS01580	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS01635	SM00052	Putative diguanylate phosphodiesterase
SG48_RS01635	SM00421	helix_turn_helix, Lux Regulon
SG48_RS01650	SM00248	ankyrin repeats
SG48_RS01685	SM00829	Enoylreductase
SG48_RS01710	SM00382	ATPases associated with a variety of cellular activities
SG48_RS01750	SM00947	Carbonic anhydrase
SG48_RS01755	SM01116	SG48_RS01755
SG48_RS01765	SM01266	SG48_RS01765
SG48_RS01775	SM01038	Beta galactosidase small chain
SG48_RS01785	SM00346	helix_turn_helix isocitrate lyase regulation
SG48_RS01810	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SG48_RS01835	SM00829	Enoylreductase
SG48_RS01880	SM00062	Bacterial periplasmic substrate-binding proteins
SG48_RS01885	SM00382	ATPases associated with a variety of cellular activities
SG48_RS01900	SM01004	Delta-aminolevulinic acid dehydratase
SG48_RS01925	SM00869	Autotransporter beta-domain
SG48_RS01980	SM00098	Alkaline phosphatase homologues
SG48_RS01990	SM00267	diguanylate cyclase
SG48_RS02060	SM00448	cheY-homologous receiver domain
SG48_RS02060	SM00862	Transcriptional regulatory protein, C terminal
SG48_RS02065	SM00091	PAS domain
SG48_RS02065	SM00387	Histidine kinase-like ATPases
SG48_RS02065	SM00388	His Kinase A (phosphoacceptor) domain
SG48_RS02080	SM00642	Alpha-amylase domain
SG48_RS02100	SM01323	SG48_RS02100
SG48_RS02115	SM00507	HNH nucleases
SG48_RS02170	SM00861	Transketolase, pyrimidine binding domain
SG48_RS02185	SM00981	SG48_RS02185
SG48_RS02265	SM00382	ATPases associated with a variety of cellular activities
SG48_RS02265	SM00994	ClpX C4-type zinc finger
SG48_RS02265	SM01086	C-terminal, D2-small domain, of ClpB protein
SG48_RS02270	SM00382	ATPases associated with a variety of cellular activities
SG48_RS02270	SM00464	Found in ATP-dependent protease La (LON)
SG48_RS02275	SM00411	bacterial (prokaryotic) histone like domain
SG48_RS02285	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SG48_RS02310	SM00344	helix_turn_helix ASNC type
SG48_RS02315	SM00382	ATPases associated with a variety of cellular activities
SG48_RS02320	SM00382	ATPases associated with a variety of cellular activities
SG48_RS02325	SM00938	Nitrogen regulatory protein P-II
SG48_RS02355	SM00052	Putative diguanylate phosphodiesterase
SG48_RS02365	SM01266	SG48_RS02365
SG48_RS02425	SM00382	ATPases associated with a variety of cellular activities
SG48_RS02435	SM00493	SG48_RS02435
SG48_RS02440	SM00387	Histidine kinase-like ATPases
SG48_RS02490	SM00530	Helix-turn-helix XRE-family like proteins 
SG48_RS02510	SM00422	helix_turn_helix, mercury resistance
SG48_RS02520	SM00244	prohibitin homologues
SG48_RS02525	SM00382	ATPases associated with a variety of cellular activities
SG48_RS02540	SM00822	SG48_RS02540
SG48_RS02550	SM00382	ATPases associated with a variety of cellular activities
SG48_RS02585	SM00450	Rhodanese Homology Domain
SG48_RS02600	SM00346	helix_turn_helix isocitrate lyase regulation
SG48_RS02680	SM01001	AIR carboxylase
SG48_RS02695	SM00840	SG48_RS02695
SG48_RS02740	SM00421	helix_turn_helix, Lux Regulon
SG48_RS02740	SM00448	cheY-homologous receiver domain
SG48_RS02795	SM00857	Resolvase, N terminal domain
SG48_RS02805	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS02920	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS02935	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS02945	SM00028	Tetratricopeptide repeats
SG48_RS02955	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SG48_RS02955	SM00387	Histidine kinase-like ATPases
SG48_RS02955	SM00388	His Kinase A (phosphoacceptor) domain
SG48_RS02960	SM00448	cheY-homologous receiver domain
SG48_RS02960	SM00862	Transcriptional regulatory protein, C terminal
SG48_RS03045	SM00923	MbtH-like protein
SG48_RS03050	SM00823	Phosphopantetheine attachment site
SG48_RS03050	SM00824	Thioesterase
SG48_RS03060	SM00382	ATPases associated with a variety of cellular activities
SG48_RS03100	SM00822	SG48_RS03100
SG48_RS03130	SM00470	ParB-like nuclease domain
SG48_RS03215	SM00764	Citrate lyase ligase C-terminal domain
SG48_RS03220	SM00091	PAS domain
SG48_RS03220	SM00387	Histidine kinase-like ATPases
SG48_RS03225	SM00448	cheY-homologous receiver domain
SG48_RS03240	SM00357	Cold shock protein domain
SG48_RS03260	SM00729	Elongator protein 3, MiaB family, Radical SAM
SG48_RS03285	SM00936	Penicillin-binding protein 5, C-terminal domain 
SG48_RS03315	SM00855	Phosphoglycerate mutase family
SG48_RS03345	SM00671	Sel1-like repeats.
SG48_RS03355	SM00271	DnaJ molecular chaperone homology domain
SG48_RS03360	SM00671	Sel1-like repeats.
SG48_RS03385	SM00382	ATPases associated with a variety of cellular activities
SG48_RS03400	SM00062	Bacterial periplasmic substrate-binding proteins
SG48_RS03415	SM00116	Domain in cystathionine beta-synthase and other proteins.
SG48_RS03415	SM01091	Transporter associated domain
SG48_RS03430	SM00729	Elongator protein 3, MiaB family, Radical SAM
SG48_RS03590	SM00448	cheY-homologous receiver domain
SG48_RS03590	SM00862	Transcriptional regulatory protein, C terminal
SG48_RS03595	SM00387	Histidine kinase-like ATPases
SG48_RS03595	SM00388	His Kinase A (phosphoacceptor) domain
SG48_RS03680	SM00796	Allophanate hydrolase subunit 1
SG48_RS03685	SM00797	Allophanate hydrolase subunit 2
SG48_RS03695	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
SG48_RS03695	SM01232	SG48_RS03695
SG48_RS03760	SM00861	Transketolase, pyrimidine binding domain
SG48_RS03775	SM00881	CoA binding domain
SG48_RS03780	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SG48_RS03780	SM00866	SG48_RS03780
SG48_RS03790	SM00872	Alpha mannosidase, middle domain
SG48_RS03920	SM00855	Phosphoglycerate mutase family
SG48_RS03945	SM00382	ATPases associated with a variety of cellular activities
SG48_RS03970	SM00382	ATPases associated with a variety of cellular activities
SG48_RS04020	SM00729	Elongator protein 3, MiaB family, Radical SAM
SG48_RS04020	SM00876	Biotin and Thiamin Synthesis associated domain
SG48_RS04040	SM00487	DEAD-like helicases superfamily
SG48_RS04040	SM00490	helicase superfamily c-terminal domain
SG48_RS04055	SM00729	Elongator protein 3, MiaB family, Radical SAM
SG48_RS04060	SM00852	Probable molybdopterin binding domain
SG48_RS04095	SM00155	Phospholipase D. Active site motifs.
SG48_RS04120	SM00382	ATPases associated with a variety of cellular activities
SG48_RS04135	SM00487	DEAD-like helicases superfamily
SG48_RS04135	SM00490	helicase superfamily c-terminal domain
SG48_RS04145	SM00487	DEAD-like helicases superfamily
SG48_RS04145	SM00488	SG48_RS04145
SG48_RS04145	SM00491	SG48_RS04145
SG48_RS04170	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
SG48_RS04195	SM00382	ATPases associated with a variety of cellular activities
SG48_RS04205	SM00062	Bacterial periplasmic substrate-binding proteins
SG48_RS04205	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
SG48_RS04240	SM00529	Helix-turn-helix diphteria tox regulatory element
SG48_RS04255	SM00382	ATPases associated with a variety of cellular activities
SG48_RS04290	SM00852	Probable molybdopterin binding domain
SG48_RS04300	SM00382	ATPases associated with a variety of cellular activities
SG48_RS04320	SM00052	Putative diguanylate phosphodiesterase
SG48_RS04325	SM00267	diguanylate cyclase
SG48_RS04330	SM00729	Elongator protein 3, MiaB family, Radical SAM
SG48_RS04350	SM00936	Penicillin-binding protein 5, C-terminal domain 
SG48_RS04355	SM00420	helix_turn_helix, Deoxyribose operon repressor
SG48_RS04355	SM01134	SG48_RS04355
SG48_RS04360	SM00014	Acid phosphatase homologues
SG48_RS04435	SM00382	ATPases associated with a variety of cellular activities
SG48_RS04460	SM00062	Bacterial periplasmic substrate-binding proteins
SG48_RS04460	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
SG48_RS04475	SM00062	Bacterial periplasmic substrate-binding proteins
SG48_RS04475	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
SG48_RS04480	SM00382	ATPases associated with a variety of cellular activities
SG48_RS04495	SM00644	SG48_RS04495
SG48_RS04560	SM00382	ATPases associated with a variety of cellular activities
SG48_RS04565	SM00357	Cold shock protein domain
SG48_RS04575	SM00382	ATPases associated with a variety of cellular activities
SG48_RS04575	SM01086	C-terminal, D2-small domain, of ClpB protein
SG48_RS04585	SM00316	Ribosomal protein S1-like RNA-binding domain
SG48_RS04595	SM00382	ATPases associated with a variety of cellular activities
SG48_RS04600	SM00382	ATPases associated with a variety of cellular activities
SG48_RS04610	SM00344	helix_turn_helix ASNC type
SG48_RS04615	SM00843	SG48_RS04615
SG48_RS04625	SM00382	ATPases associated with a variety of cellular activities
SG48_RS04635	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SG48_RS04720	SM00316	Ribosomal protein S1-like RNA-binding domain
SG48_RS04725	SM00411	bacterial (prokaryotic) histone like domain
SG48_RS04730	SM00849	Metallo-beta-lactamase superfamily
SG48_RS04735	SM00382	ATPases associated with a variety of cellular activities
SG48_RS04800	SM00849	Metallo-beta-lactamase superfamily
SG48_RS04835	SM00382	ATPases associated with a variety of cellular activities
SG48_RS04850	SM00062	Bacterial periplasmic substrate-binding proteins
SG48_RS04910	SM00981	SG48_RS04910
SG48_RS04915	SM00382	ATPases associated with a variety of cellular activities
SG48_RS04990	SM00851	MGS-like domain
SG48_RS05005	SM00881	CoA binding domain
SG48_RS05010	SM00992	Hemimethylated DNA-binding protein YccV like
SG48_RS05015	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
SG48_RS05095	SM00226	Low molecular weight phosphatase family
SG48_RS05135	SM00357	Cold shock protein domain
SG48_RS05140	SM00357	Cold shock protein domain
SG48_RS05160	SM00073	Histidine Phosphotransfer domain
SG48_RS05160	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SG48_RS05160	SM00387	Histidine kinase-like ATPases
SG48_RS05160	SM00388	His Kinase A (phosphoacceptor) domain
SG48_RS05160	SM00448	cheY-homologous receiver domain
SG48_RS05170	SM00448	cheY-homologous receiver domain
SG48_RS05170	SM00862	Transcriptional regulatory protein, C terminal
SG48_RS05195	SM00271	DnaJ molecular chaperone homology domain
SG48_RS05235	SM00903	Flavin reductase like domain
SG48_RS05330	SM00028	Tetratricopeptide repeats
SG48_RS05335	SM00267	diguanylate cyclase
SG48_RS05375	SM00481	DNA polymerase alpha chain like domain
SG48_RS05405	SM00421	helix_turn_helix, Lux Regulon
SG48_RS05435	SM00506	Appr-1"-p processing enzyme
SG48_RS05440	SM00155	Phospholipase D. Active site motifs.
SG48_RS05495	SM00450	Rhodanese Homology Domain
SG48_RS05500	SM00867	YceI-like domain 
SG48_RS05580	SM00858	SG48_RS05580
SG48_RS05625	SM00047	Lysozyme subfamily 2
SG48_RS05640	SM00316	Ribosomal protein S1-like RNA-binding domain
SG48_RS05650	SM00363	S4 RNA-binding domain
SG48_RS05680	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SG48_RS05685	SM00822	SG48_RS05685
SG48_RS05695	SM00825	Beta-ketoacyl synthase
SG48_RS05785	SM00257	Lysin motif
SG48_RS05790	SM00487	DEAD-like helicases superfamily
SG48_RS05790	SM00490	helicase superfamily c-terminal domain
SG48_RS05790	SM00982	SG48_RS05790
SG48_RS05790	SM01058	CarD-like/TRCF domain
SG48_RS05805	SM00382	ATPases associated with a variety of cellular activities
SG48_RS05850	SM00382	ATPases associated with a variety of cellular activities
SG48_RS05865	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
SG48_RS05870	SM00387	Histidine kinase-like ATPases
SG48_RS05875	SM00448	cheY-homologous receiver domain
SG48_RS05875	SM00862	Transcriptional regulatory protein, C terminal
SG48_RS05905	SM01329	SG48_RS05905
SG48_RS06005	SM00857	Resolvase, N terminal domain
SG48_RS06010	SM00507	HNH nucleases
SG48_RS06030	SM00422	helix_turn_helix, mercury resistance
SG48_RS06035	SM00052	Putative diguanylate phosphodiesterase
SG48_RS06035	SM01034	Sensors of blue-light using FAD
SG48_RS06060	SM00052	Putative diguanylate phosphodiesterase
SG48_RS06175	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SG48_RS06190	SM01005	Alanine racemase, C-terminal domain
SG48_RS06195	SM01091	Transporter associated domain
SG48_RS06235	SM01120	SG48_RS06235
SG48_RS06245	SM00091	PAS domain
SG48_RS06245	SM00382	ATPases associated with a variety of cellular activities
SG48_RS06250	SM00869	Autotransporter beta-domain
SG48_RS06280	SM01400	SG48_RS06280
SG48_RS06300	SM00937	SG48_RS06300
SG48_RS06365	SM00421	helix_turn_helix, Lux Regulon
SG48_RS06365	SM00448	cheY-homologous receiver domain
SG48_RS06370	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SG48_RS06370	SM00387	Histidine kinase-like ATPases
SG48_RS06385	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SG48_RS06435	SM00448	cheY-homologous receiver domain
SG48_RS06445	SM00528	Domain in histone-like proteins of HNS family
SG48_RS06490	SM00382	ATPases associated with a variety of cellular activities
SG48_RS06495	SM00382	ATPases associated with a variety of cellular activities
SG48_RS06505	SM00155	Phospholipase D. Active site motifs.
SG48_RS06590	SM00481	DNA polymerase alpha chain like domain
SG48_RS06605	SM00363	S4 RNA-binding domain
SG48_RS06615	SM00822	SG48_RS06615
SG48_RS06640	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
SG48_RS06640	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
SG48_RS06640	SM00493	SG48_RS06640
SG48_RS06675	SM00014	Acid phosphatase homologues
SG48_RS06685	SM00028	Tetratricopeptide repeats
SG48_RS06690	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SG48_RS06705	SM00420	helix_turn_helix, Deoxyribose operon repressor
SG48_RS06705	SM01134	SG48_RS06705
SG48_RS06715	SM00052	Putative diguanylate phosphodiesterase
SG48_RS06715	SM00091	PAS domain
SG48_RS06715	SM00267	diguanylate cyclase
SG48_RS06725	SM00357	Cold shock protein domain
SG48_RS06725	SM00955	SG48_RS06725
SG48_RS06745	SM00382	ATPases associated with a variety of cellular activities
SG48_RS06750	SM00382	ATPases associated with a variety of cellular activities
SG48_RS06785	SM01230	SG48_RS06785
SG48_RS06795	SM00530	Helix-turn-helix XRE-family like proteins 
SG48_RS06815	SM00382	ATPases associated with a variety of cellular activities
SG48_RS06840	SM00450	Rhodanese Homology Domain
SG48_RS06845	SM00642	Alpha-amylase domain
SG48_RS06900	SM00354	helix_turn _helix lactose operon repressor
SG48_RS06915	SM00091	PAS domain
SG48_RS06915	SM00382	ATPases associated with a variety of cellular activities
SG48_RS06925	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SG48_RS06980	SM00100	Cyclic nucleotide-monophosphate binding domain
SG48_RS06980	SM00419	helix_turn_helix, cAMP Regulatory protein
SG48_RS07020	SM00463	Small MutS-related domain
SG48_RS07025	SM00091	PAS domain
SG48_RS07025	SM00267	diguanylate cyclase
SG48_RS07040	SM00487	DEAD-like helicases superfamily
SG48_RS07040	SM00490	helicase superfamily c-terminal domain
SG48_RS07140	SM00470	ParB-like nuclease domain
SG48_RS07195	SM00857	Resolvase, N terminal domain
SG48_RS07215	SM00890	Domain of unknown function
SG48_RS07250	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS07385	SM00195	Dual specificity phosphatase, catalytic domain
SG48_RS07385	SM00404	Protein tyrosine phosphatase, catalytic domain motif
SG48_RS07395	SM00382	ATPases associated with a variety of cellular activities
SG48_RS07395	SM00487	DEAD-like helicases superfamily
SG48_RS07395	SM00490	helicase superfamily c-terminal domain
SG48_RS07395	SM00847	Helicase associated domain (HA2)  Add an annotation
SG48_RS07440	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SG48_RS07440	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SG48_RS07440	SM00319	Homologues of the ligand binding domain of Tar
SG48_RS07450	SM01150	SG48_RS07450
SG48_RS07500	SM01321	SG48_RS07500
SG48_RS07515	SM00530	Helix-turn-helix XRE-family like proteins 
SG48_RS07535	SM00530	Helix-turn-helix XRE-family like proteins 
SG48_RS07540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SG48_RS07550	SM00382	ATPases associated with a variety of cellular activities
SG48_RS07595	SM00829	Enoylreductase
SG48_RS07600	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SG48_RS07600	SM00895	SG48_RS07600
SG48_RS07655	SM00903	Flavin reductase like domain
SG48_RS07685	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SG48_RS07710	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SG48_RS07730	SM00530	Helix-turn-helix XRE-family like proteins 
SG48_RS07735	SM00829	Enoylreductase
SG48_RS07740	SM00919	Malic enzyme, NAD binding domain
SG48_RS07740	SM01274	SG48_RS07740
SG48_RS07760	SM00382	ATPases associated with a variety of cellular activities
SG48_RS07765	SM00382	ATPases associated with a variety of cellular activities
SG48_RS07790	SM00052	Putative diguanylate phosphodiesterase
SG48_RS07790	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SG48_RS07790	SM00091	PAS domain
SG48_RS07790	SM00267	diguanylate cyclase
SG48_RS07795	SM00267	diguanylate cyclase
SG48_RS07830	SM00382	ATPases associated with a variety of cellular activities
SG48_RS07845	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS07890	SM00530	Helix-turn-helix XRE-family like proteins 
SG48_RS07895	SM00869	Autotransporter beta-domain
SG48_RS07915	SM00382	ATPases associated with a variety of cellular activities
SG48_RS07935	SM01133	SG48_RS07935
SG48_RS07965	SM00267	diguanylate cyclase
SG48_RS08005	SM00347	helix_turn_helix multiple antibiotic resistance protein
SG48_RS08010	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS08035	SM00267	diguanylate cyclase
SG48_RS08060	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SG48_RS08060	SM00895	SG48_RS08060
SG48_RS08085	SM00857	Resolvase, N terminal domain
SG48_RS08125	SM00357	Cold shock protein domain
SG48_RS08150	SM00357	Cold shock protein domain
SG48_RS08155	SM00357	Cold shock protein domain
SG48_RS08165	SM00507	HNH nucleases
SG48_RS08210	SM00530	Helix-turn-helix XRE-family like proteins 
SG48_RS08260	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SG48_RS08290	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SG48_RS08295	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SG48_RS08375	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
SG48_RS08375	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
SG48_RS08400	SM00448	cheY-homologous receiver domain
SG48_RS08400	SM00862	Transcriptional regulatory protein, C terminal
SG48_RS08405	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SG48_RS08405	SM00387	Histidine kinase-like ATPases
SG48_RS08405	SM00388	His Kinase A (phosphoacceptor) domain
SG48_RS08460	SM00354	helix_turn _helix lactose operon repressor
SG48_RS08520	SM00900	SG48_RS08520
SG48_RS08530	SM00478	endonuclease III
SG48_RS08530	SM00525	SG48_RS08530
SG48_RS08555	SM00363	S4 RNA-binding domain
SG48_RS08580	SM00347	helix_turn_helix multiple antibiotic resistance protein
SG48_RS08630	SM00479	SG48_RS08630
SG48_RS08635	SM00382	ATPases associated with a variety of cellular activities
SG48_RS08635	SM00487	DEAD-like helicases superfamily
SG48_RS08635	SM00490	helicase superfamily c-terminal domain
SG48_RS08665	SM00354	helix_turn _helix lactose operon repressor
SG48_RS08740	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
SG48_RS08765	SM00257	Lysin motif
SG48_RS08785	SM00382	ATPases associated with a variety of cellular activities
SG48_RS08845	SM00882	Coenzyme A transferase
SG48_RS08855	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS08865	SM00893	Electron transfer flavoprotein domain
SG48_RS08870	SM00893	Electron transfer flavoprotein domain
SG48_RS08930	SM00382	ATPases associated with a variety of cellular activities
SG48_RS08945	SM00411	bacterial (prokaryotic) histone like domain
SG48_RS08950	SM00873	B3/4 domain
SG48_RS08950	SM00874	tRNA synthetase B5 domain
SG48_RS08950	SM00896	Ferredoxin-fold anticodon binding domain
SG48_RS08980	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SG48_RS09045	SM01060	SG48_RS09045
SG48_RS09060	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS09095	SM00465	GIY-YIG type nucleases (URI domain)
SG48_RS09170	SM00382	ATPases associated with a variety of cellular activities
SG48_RS09175	SM00450	Rhodanese Homology Domain
SG48_RS09195	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
SG48_RS09205	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
SG48_RS09205	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
SG48_RS09205	SM00493	SG48_RS09205
SG48_RS09235	SM00870	SG48_RS09235
SG48_RS09250	SM00420	helix_turn_helix, Deoxyribose operon repressor
SG48_RS09250	SM01134	SG48_RS09250
SG48_RS09270	SM00829	Enoylreductase
SG48_RS09295	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SG48_RS09315	SM00763	PrkA AAA domain
SG48_RS09325	SM00267	diguanylate cyclase
SG48_RS09330	SM00267	diguanylate cyclase
SG48_RS09350	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS09370	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SG48_RS09370	SM00267	diguanylate cyclase
SG48_RS09405	SM01329	SG48_RS09405
SG48_RS09425	SM00341	Helicase and RNase D C-terminal
SG48_RS09425	SM00474	3'-5' exonuclease
SG48_RS09445	SM00487	DEAD-like helicases superfamily
SG48_RS09445	SM00491	SG48_RS09445
SG48_RS09480	SM00052	Putative diguanylate phosphodiesterase
SG48_RS09485	SM01091	Transporter associated domain
SG48_RS09530	SM00357	Cold shock protein domain
SG48_RS09560	SM00346	helix_turn_helix isocitrate lyase regulation
SG48_RS09575	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SG48_RS09575	SM00245	tail specific protease
SG48_RS09580	SM00945	ProQ/FINO family
SG48_RS09585	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SG48_RS09650	SM00479	SG48_RS09650
SG48_RS09720	SM00257	Lysin motif
SG48_RS09730	SM00382	ATPases associated with a variety of cellular activities
SG48_RS09740	SM00382	ATPases associated with a variety of cellular activities
SG48_RS09745	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SG48_RS09820	SM00836	DALR anticodon binding domain
SG48_RS09820	SM01016	Arginyl tRNA synthetase N terminal dom
SG48_RS09850	SM00448	cheY-homologous receiver domain
SG48_RS09855	SM00448	cheY-homologous receiver domain
SG48_RS09860	SM00138	Methyltransferase, chemotaxis proteins 
SG48_RS09865	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SG48_RS09865	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SG48_RS09865	SM00319	Homologues of the ligand binding domain of Tar
SG48_RS09870	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SG48_RS09870	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SG48_RS09870	SM00319	Homologues of the ligand binding domain of Tar
SG48_RS09875	SM00260	Two component signalling adaptor domain
SG48_RS09880	SM00073	Histidine Phosphotransfer domain
SG48_RS09880	SM00260	Two component signalling adaptor domain
SG48_RS09880	SM00387	Histidine kinase-like ATPases
SG48_RS09880	SM01231	SG48_RS09880
SG48_RS09925	SM00382	ATPases associated with a variety of cellular activities
SG48_RS09995	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SG48_RS09995	SM00465	GIY-YIG type nucleases (URI domain)
SG48_RS10000	SM00421	helix_turn_helix, Lux Regulon
SG48_RS10000	SM00448	cheY-homologous receiver domain
SG48_RS10015	SM00421	helix_turn_helix, Lux Regulon
SG48_RS10020	SM00382	ATPases associated with a variety of cellular activities
SG48_RS10035	SM00062	Bacterial periplasmic substrate-binding proteins
SG48_RS10035	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
SG48_RS10070	SM00642	Alpha-amylase domain
SG48_RS10135	SM00382	ATPases associated with a variety of cellular activities
SG48_RS10185	SM00421	helix_turn_helix, Lux Regulon
SG48_RS10205	SM00267	diguanylate cyclase
SG48_RS10235	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SG48_RS10265	SM00387	Histidine kinase-like ATPases
SG48_RS10265	SM00388	His Kinase A (phosphoacceptor) domain
SG48_RS10270	SM00448	cheY-homologous receiver domain
SG48_RS10270	SM00862	Transcriptional regulatory protein, C terminal
SG48_RS10275	SM00095	Transthyretin
SG48_RS10320	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
SG48_RS10320	SM00634	Bacterial Ig-like domain (group 1)
SG48_RS10430	SM00869	Autotransporter beta-domain
SG48_RS10485	SM00871	Bacterial transcription activator, effector binding domain
SG48_RS10490	SM00936	Penicillin-binding protein 5, C-terminal domain 
SG48_RS10495	SM00479	SG48_RS10495
SG48_RS10580	SM00984	UDP binding domain
SG48_RS10585	SM01350	SG48_RS10585
SG48_RS10745	SM00226	Low molecular weight phosphatase family
SG48_RS10755	SM00116	Domain in cystathionine beta-synthase and other proteins.
SG48_RS10755	SM01091	Transporter associated domain
SG48_RS10775	SM00052	Putative diguanylate phosphodiesterase
SG48_RS10775	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SG48_RS10775	SM00091	PAS domain
SG48_RS10775	SM00267	diguanylate cyclase
SG48_RS10780	SM00478	endonuclease III
SG48_RS10780	SM01009	AlkA N-terminal domain
SG48_RS10810	SM00327	von Willebrand factor (vWF) type A domain
SG48_RS10835	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SG48_RS10835	SM00387	Histidine kinase-like ATPases
SG48_RS10835	SM00388	His Kinase A (phosphoacceptor) domain
SG48_RS10840	SM00448	cheY-homologous receiver domain
SG48_RS10840	SM00862	Transcriptional regulatory protein, C terminal
SG48_RS10870	SM00046	Diacylglycerol kinase catalytic domain (presumed)
SG48_RS10875	SM01134	SG48_RS10875
SG48_RS10890	SM00420	helix_turn_helix, Deoxyribose operon repressor
SG48_RS10895	SM00829	Enoylreductase
SG48_RS10925	SM01133	SG48_RS10925
SG48_RS10945	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SG48_RS10945	SM00866	SG48_RS10945
SG48_RS10950	SM00641	Glycosyl hydrolases family 25
SG48_RS11020	SM00773	Proposed nucleic acid binding domain
SG48_RS11040	SM00382	ATPases associated with a variety of cellular activities
SG48_RS11050	SM00327	von Willebrand factor (vWF) type A domain
SG48_RS11070	SM00448	cheY-homologous receiver domain
SG48_RS11070	SM00850	LytTr DNA-binding domain
SG48_RS11075	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SG48_RS11080	SM00422	helix_turn_helix, mercury resistance
SG48_RS11095	SM00382	ATPases associated with a variety of cellular activities
SG48_RS11110	SM01217	SG48_RS11110
SG48_RS11195	SM00382	ATPases associated with a variety of cellular activities
SG48_RS11205	SM00354	helix_turn _helix lactose operon repressor
SG48_RS11255	SM00518	AP endonuclease family 2
SG48_RS11275	SM00100	Cyclic nucleotide-monophosphate binding domain
SG48_RS11320	SM00841	Elongation factor P, C-terminal
SG48_RS11320	SM01185	SG48_RS11320
SG48_RS11330	SM00833	Cobalamin synthesis protein cobW C-terminal domain
SG48_RS11335	SM00014	Acid phosphatase homologues
SG48_RS11345	SM00052	Putative diguanylate phosphodiesterase
SG48_RS11365	SM00382	ATPases associated with a variety of cellular activities
SG48_RS11380	SM00363	S4 RNA-binding domain
SG48_RS11385	SM00487	DEAD-like helicases superfamily
SG48_RS11385	SM00490	helicase superfamily c-terminal domain
SG48_RS11415	SM00869	Autotransporter beta-domain
SG48_RS11430	SM00421	helix_turn_helix, Lux Regulon
SG48_RS11430	SM00448	cheY-homologous receiver domain
SG48_RS11470	SM00382	ATPases associated with a variety of cellular activities
SG48_RS11495	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SG48_RS11525	SM00382	ATPases associated with a variety of cellular activities
SG48_RS11535	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS11560	SM00387	Histidine kinase-like ATPases
SG48_RS11565	SM00421	helix_turn_helix, Lux Regulon
SG48_RS11565	SM00448	cheY-homologous receiver domain
SG48_RS11570	SM00387	Histidine kinase-like ATPases
SG48_RS11570	SM00388	His Kinase A (phosphoacceptor) domain
SG48_RS11570	SM00448	cheY-homologous receiver domain
SG48_RS11575	SM00091	PAS domain
SG48_RS11575	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SG48_RS11575	SM00387	Histidine kinase-like ATPases
SG48_RS11575	SM00388	His Kinase A (phosphoacceptor) domain
SG48_RS11580	SM00382	ATPases associated with a variety of cellular activities
SG48_RS11580	SM00448	cheY-homologous receiver domain
SG48_RS11585	SM00882	Coenzyme A transferase
SG48_RS11590	SM00882	Coenzyme A transferase
SG48_RS11620	SM01359	SG48_RS11620
SG48_RS11620	SM01360	SG48_RS11620
SG48_RS11635	SM00434	DNA Topoisomerase IV
SG48_RS11645	SM00869	Autotransporter beta-domain
SG48_RS11725	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SG48_RS11730	SM00346	helix_turn_helix isocitrate lyase regulation
SG48_RS11735	SM00852	Probable molybdopterin binding domain
SG48_RS11800	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SG48_RS11835	SM00849	Metallo-beta-lactamase superfamily
SG48_RS11845	SM00327	von Willebrand factor (vWF) type A domain
SG48_RS11910	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SG48_RS11910	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
SG48_RS11915	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
SG48_RS11950	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SG48_RS12015	SM00905	Dihydroneopterin aldolase
SG48_RS12030	SM00382	ATPases associated with a variety of cellular activities
SG48_RS12045	SM00062	Bacterial periplasmic substrate-binding proteins
SG48_RS12050	SM00062	Bacterial periplasmic substrate-binding proteins
SG48_RS12095	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SG48_RS12115	SM00825	Beta-ketoacyl synthase
SG48_RS12155	SM00463	Small MutS-related domain
SG48_RS12345	SM00421	helix_turn_helix, Lux Regulon
SG48_RS12345	SM00448	cheY-homologous receiver domain
SG48_RS12350	SM00062	Bacterial periplasmic substrate-binding proteins
SG48_RS12350	SM00073	Histidine Phosphotransfer domain
SG48_RS12350	SM00387	Histidine kinase-like ATPases
SG48_RS12350	SM00388	His Kinase A (phosphoacceptor) domain
SG48_RS12350	SM00448	cheY-homologous receiver domain
SG48_RS12405	SM00387	Histidine kinase-like ATPases
SG48_RS12410	SM00448	cheY-homologous receiver domain
SG48_RS12410	SM00850	LytTr DNA-binding domain
SG48_RS12415	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS12480	SM00052	Putative diguanylate phosphodiesterase
SG48_RS12480	SM00267	diguanylate cyclase
SG48_RS12570	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SG48_RS12570	SM00292	breast cancer carboxy-terminal domain
SG48_RS12570	SM00532	Ligase N family
SG48_RS12575	SM00771	ZipA, C-terminal domain (FtsZ-binding)
SG48_RS12615	SM00773	Proposed nucleic acid binding domain
SG48_RS12625	SM00382	ATPases associated with a variety of cellular activities
SG48_RS12645	SM00822	SG48_RS12645
SG48_RS12690	SM00646	SG48_RS12690
SG48_RS12700	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS12705	SM00877	SG48_RS12705
SG48_RS12710	SM00877	SG48_RS12710
SG48_RS12800	SM00877	SG48_RS12800
SG48_RS12825	SM00877	SG48_RS12825
SG48_RS12830	SM00919	Malic enzyme, NAD binding domain
SG48_RS12830	SM01274	SG48_RS12830
SG48_RS12840	SM00861	Transketolase, pyrimidine binding domain
SG48_RS12860	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SG48_RS12860	SM00387	Histidine kinase-like ATPases
SG48_RS12920	SM01130	SG48_RS12920
SG48_RS12985	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SG48_RS12985	SM00382	ATPases associated with a variety of cellular activities
SG48_RS13045	SM00052	Putative diguanylate phosphodiesterase
SG48_RS13045	SM00267	diguanylate cyclase
SG48_RS13075	SM00116	Domain in cystathionine beta-synthase and other proteins.
SG48_RS13075	SM01240	SG48_RS13075
SG48_RS13095	SM00564	beta-propeller repeat
SG48_RS13115	SM00530	Helix-turn-helix XRE-family like proteins 
SG48_RS13125	SM00562	SG48_RS13125
SG48_RS13135	SM01359	SG48_RS13135
SG48_RS13135	SM01360	SG48_RS13135
SG48_RS13140	SM00450	Rhodanese Homology Domain
SG48_RS13170	SM00271	DnaJ molecular chaperone homology domain
SG48_RS13260	SM00829	Enoylreductase
SG48_RS13270	SM00382	ATPases associated with a variety of cellular activities
SG48_RS13280	SM00028	Tetratricopeptide repeats
SG48_RS13300	SM00938	Nitrogen regulatory protein P-II
SG48_RS13305	SM00382	ATPases associated with a variety of cellular activities
SG48_RS13305	SM00448	cheY-homologous receiver domain
SG48_RS13315	SM00387	Histidine kinase-like ATPases
SG48_RS13315	SM00388	His Kinase A (phosphoacceptor) domain
SG48_RS13320	SM01211	SG48_RS13320
SG48_RS13325	SM00062	Bacterial periplasmic substrate-binding proteins
SG48_RS13385	SM00358	Double-stranded RNA binding motif
SG48_RS13385	SM00535	Ribonuclease III family
SG48_RS13435	SM00487	DEAD-like helicases superfamily
SG48_RS13435	SM00490	helicase superfamily c-terminal domain
SG48_RS13460	SM00986	Uracil DNA glycosylase superfamily
SG48_RS13460	SM00987	UreE urease accessory protein, C-terminal domain 
SG48_RS13465	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SG48_RS13480	SM01144	SG48_RS13480
SG48_RS13485	SM00881	CoA binding domain
SG48_RS13490	SM00155	Phospholipase D. Active site motifs.
SG48_RS13530	SM00382	ATPases associated with a variety of cellular activities
SG48_RS13530	SM01086	C-terminal, D2-small domain, of ClpB protein
SG48_RS13540	SM00363	S4 RNA-binding domain
SG48_RS13560	SM00830	Chorismate mutase type II
SG48_RS13565	SM00830	Chorismate mutase type II
SG48_RS13585	SM00267	diguanylate cyclase
SG48_RS13615	SM00382	ATPases associated with a variety of cellular activities
SG48_RS13615	SM00962	SRP54-type protein, GTPase domain
SG48_RS13615	SM00963	SRP54-type protein, helical bundle domain
SG48_RS13625	SM01091	Transporter associated domain
SG48_RS13695	SM00487	DEAD-like helicases superfamily
SG48_RS13695	SM00490	helicase superfamily c-terminal domain
SG48_RS13860	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SG48_RS13860	SM00895	SG48_RS13860
SG48_RS13865	SM00257	Lysin motif
SG48_RS13865	SM00749	bacterial OsmY and nodulation domain
SG48_RS13875	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SG48_RS13880	SM00450	Rhodanese Homology Domain
SG48_RS13885	SM00528	Domain in histone-like proteins of HNS family
SG48_RS13925	SM00382	ATPases associated with a variety of cellular activities
SG48_RS13955	SM00347	helix_turn_helix multiple antibiotic resistance protein
SG48_RS14025	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SG48_RS14040	SM00382	ATPases associated with a variety of cellular activities
SG48_RS14080	SM00420	helix_turn_helix, Deoxyribose operon repressor
SG48_RS14080	SM01134	SG48_RS14080
SG48_RS14090	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SG48_RS14090	SM00382	ATPases associated with a variety of cellular activities
SG48_RS14095	SM00849	Metallo-beta-lactamase superfamily
SG48_RS14115	SM00354	helix_turn _helix lactose operon repressor
SG48_RS14205	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SG48_RS14205	SM00382	ATPases associated with a variety of cellular activities
SG48_RS14215	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
SG48_RS14215	SM00534	ATPase domain of DNA mismatch repair MUTS family
SG48_RS14225	SM00420	helix_turn_helix, Deoxyribose operon repressor
SG48_RS14225	SM01134	SG48_RS14225
SG48_RS14240	SM01007	Class II Aldolase and Adducin N-terminal domain
SG48_RS14260	SM00257	Lysin motif
SG48_RS14330	SM01101	SG48_RS14330
SG48_RS14355	SM00487	DEAD-like helicases superfamily
SG48_RS14355	SM00490	helicase superfamily c-terminal domain
SG48_RS14400	SM00893	Electron transfer flavoprotein domain
SG48_RS14445	SM01192	SG48_RS14445
SG48_RS14445	SM01193	SG48_RS14445
SG48_RS14465	SM00966	SpoVT / AbrB like domain 
SG48_RS14470	SM00954	Region found in RelA / SpoT proteins
SG48_RS14480	SM00073	Histidine Phosphotransfer domain
SG48_RS14480	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SG48_RS14480	SM00387	Histidine kinase-like ATPases
SG48_RS14480	SM00388	His Kinase A (phosphoacceptor) domain
SG48_RS14480	SM00448	cheY-homologous receiver domain
SG48_RS14485	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SG48_RS14490	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SG48_RS14545	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SG48_RS14545	SM00475	5'-3' exonuclease
SG48_RS14555	SM01007	Class II Aldolase and Adducin N-terminal domain
SG48_RS14580	SM00420	helix_turn_helix, Deoxyribose operon repressor
SG48_RS14580	SM01134	SG48_RS14580
SG48_RS14620	SM00925	MltA specific insert domain
SG48_RS14640	SM00646	SG48_RS14640
SG48_RS14650	SM00382	ATPases associated with a variety of cellular activities
SG48_RS14700	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SG48_RS14720	SM00927	DNA mismatch repair enzyme MutH
SG48_RS14745	SM00563	Phosphate acyltransferases
SG48_RS14750	SM00354	helix_turn _helix lactose operon repressor
SG48_RS14800	SM00862	Transcriptional regulatory protein, C terminal
SG48_RS14825	SM00028	Tetratricopeptide repeats
SG48_RS14825	SM00862	Transcriptional regulatory protein, C terminal
SG48_RS14840	SM00421	helix_turn_helix, Lux Regulon
SG48_RS14890	SM00257	Lysin motif
SG48_RS14895	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SG48_RS14900	SM01092	CO dehydrogenase flavoprotein C-terminal domain
SG48_RS14910	SM00091	PAS domain
SG48_RS14910	SM00382	ATPases associated with a variety of cellular activities
SG48_RS14965	SM01092	CO dehydrogenase flavoprotein C-terminal domain
SG48_RS14970	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SG48_RS15025	SM00937	SG48_RS15025
SG48_RS15070	SM01022	SG48_RS15070
SG48_RS15110	SM01011	Aminopeptidase P, N-terminal domain
SG48_RS15200	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SG48_RS15235	SM00861	Transketolase, pyrimidine binding domain
SG48_RS15280	SM00731	SprT homologues.
SG48_RS15305	SM00732	Likely ribonuclease with RNase H fold.
SG48_RS15310	SM00382	ATPases associated with a variety of cellular activities
SG48_RS15325	SM01152	SG48_RS15325
SG48_RS15335	SM00729	Elongator protein 3, MiaB family, Radical SAM
SG48_RS15345	SM00870	SG48_RS15345
SG48_RS15370	SM00478	endonuclease III
SG48_RS15370	SM00525	SG48_RS15370
SG48_RS15430	SM01276	SG48_RS15430
SG48_RS15470	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SG48_RS15470	SM00895	SG48_RS15470
SG48_RS15615	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS15645	SM00729	Elongator protein 3, MiaB family, Radical SAM
SG48_RS15655	SM00563	Phosphate acyltransferases
SG48_RS15660	SM00434	DNA Topoisomerase IV
SG48_RS15670	SM00530	Helix-turn-helix XRE-family like proteins 
SG48_RS15680	SM00871	Bacterial transcription activator, effector binding domain
SG48_RS15690	SM00448	cheY-homologous receiver domain
SG48_RS15690	SM00862	Transcriptional regulatory protein, C terminal
SG48_RS15695	SM00387	Histidine kinase-like ATPases
SG48_RS15695	SM00388	His Kinase A (phosphoacceptor) domain
SG48_RS15715	SM00387	Histidine kinase-like ATPases
SG48_RS15715	SM00433	TopoisomeraseII
SG48_RS15825	SM00244	prohibitin homologues
SG48_RS15850	SM01118	SG48_RS15850
SG48_RS15860	SM00287	Bacterial SH3 domain homologues
SG48_RS15875	SM00905	Dihydroneopterin aldolase
SG48_RS15880	SM01207	SG48_RS15880
SG48_RS15915	SM00400	zinc finger
SG48_RS15915	SM00493	SG48_RS15915
SG48_RS15915	SM00766	DNA primase DnaG DnaB-binding
SG48_RS15945	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SG48_RS15945	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SG48_RS15960	SM00354	helix_turn _helix lactose operon repressor
SG48_RS15965	SM01038	Beta galactosidase small chain
SG48_RS15995	SM00530	Helix-turn-helix XRE-family like proteins 
SG48_RS16045	SM00858	SG48_RS16045
SG48_RS16060	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SG48_RS16060	SM00895	SG48_RS16060
SG48_RS16210	SM00858	SG48_RS16210
SG48_RS16225	SM00420	helix_turn_helix, Deoxyribose operon repressor
SG48_RS16225	SM01134	SG48_RS16225
SG48_RS16320	SM00749	bacterial OsmY and nodulation domain
SG48_RS16330	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SG48_RS16345	SM00465	GIY-YIG type nucleases (URI domain)
SG48_RS16385	SM00487	DEAD-like helicases superfamily
SG48_RS16385	SM00490	helicase superfamily c-terminal domain
SG48_RS16390	SM00028	Tetratricopeptide repeats
SG48_RS16395	SM00316	Ribosomal protein S1-like RNA-binding domain
SG48_RS16395	SM00322	K homology RNA-binding domain
SG48_RS16400	SM01387	SG48_RS16400
SG48_RS16420	SM00316	Ribosomal protein S1-like RNA-binding domain
SG48_RS16465	SM00382	ATPases associated with a variety of cellular activities
SG48_RS16475	SM01103	SG48_RS16475
SG48_RS16550	SM00382	ATPases associated with a variety of cellular activities
SG48_RS16580	SM00382	ATPases associated with a variety of cellular activities
SG48_RS16625	SM00073	Histidine Phosphotransfer domain
SG48_RS16625	SM00091	PAS domain
SG48_RS16625	SM00387	Histidine kinase-like ATPases
SG48_RS16625	SM00388	His Kinase A (phosphoacceptor) domain
SG48_RS16625	SM00448	cheY-homologous receiver domain
SG48_RS16630	SM00729	Elongator protein 3, MiaB family, Radical SAM
SG48_RS16705	SM01130	SG48_RS16705
SG48_RS16710	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SG48_RS16710	SM00895	SG48_RS16710
SG48_RS16750	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SG48_RS16755	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SG48_RS16810	SM00316	Ribosomal protein S1-like RNA-binding domain
SG48_RS16840	SM00052	Putative diguanylate phosphodiesterase
SG48_RS16840	SM00267	diguanylate cyclase
SG48_RS16845	SM00829	Enoylreductase
SG48_RS16870	SM00878	Biotin carboxylase C-terminal domain
SG48_RS16935	SM00062	Bacterial periplasmic substrate-binding proteins
SG48_RS16950	SM00382	ATPases associated with a variety of cellular activities
SG48_RS17055	SM00422	helix_turn_helix, mercury resistance
SG48_RS17070	SM00662	RNA polymerases D
SG48_RS17075	SM00363	S4 RNA-binding domain
SG48_RS17075	SM01390	SG48_RS17075
SG48_RS17140	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SG48_RS17145	SM01374	SG48_RS17145
SG48_RS17165	SM00322	K homology RNA-binding domain
SG48_RS17180	SM01382	SG48_RS17180
SG48_RS17180	SM01383	SG48_RS17180
SG48_RS17200	SM01403	SG48_RS17200
SG48_RS17225	SM00382	ATPases associated with a variety of cellular activities
SG48_RS17285	SM00495	Chitin-binding domain type 3
SG48_RS17295	SM00838	Elongation factor G C-terminus
SG48_RS17295	SM00889	Elongation factor G, domain IV
SG48_RS17360	SM00382	ATPases associated with a variety of cellular activities
SG48_RS17390	SM00100	Cyclic nucleotide-monophosphate binding domain
SG48_RS17390	SM00419	helix_turn_helix, cAMP Regulatory protein
SG48_RS17475	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SG48_RS17475	SM00866	SG48_RS17475
SG48_RS17555	SM00965	Secretin and TonB N terminus short domain
SG48_RS17600	SM00363	S4 RNA-binding domain
SG48_RS17625	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SG48_RS17625	SM00387	Histidine kinase-like ATPases
SG48_RS17625	SM00388	His Kinase A (phosphoacceptor) domain
SG48_RS17630	SM00448	cheY-homologous receiver domain
SG48_RS17630	SM00862	Transcriptional regulatory protein, C terminal
SG48_RS17640	SM00316	Ribosomal protein S1-like RNA-binding domain
SG48_RS17640	SM00732	Likely ribonuclease with RNase H fold.
SG48_RS17645	SM00899	SG48_RS17645
SG48_RS17695	SM00421	helix_turn_helix, Lux Regulon
SG48_RS17710	SM00382	ATPases associated with a variety of cellular activities
SG48_RS17715	SM00420	helix_turn_helix, Deoxyribose operon repressor
SG48_RS17715	SM01134	SG48_RS17715
SG48_RS17725	SM00450	Rhodanese Homology Domain
SG48_RS17755	SM00642	Alpha-amylase domain
SG48_RS17760	SM00642	Alpha-amylase domain
SG48_RS17765	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SG48_RS17785	SM00354	helix_turn _helix lactose operon repressor
SG48_RS17840	SM00382	ATPases associated with a variety of cellular activities
SG48_RS17865	SM00382	ATPases associated with a variety of cellular activities
SG48_RS17870	SM00382	ATPases associated with a variety of cellular activities
SG48_RS17915	SM00382	ATPases associated with a variety of cellular activities
SG48_RS17920	SM00382	ATPases associated with a variety of cellular activities
SG48_RS17920	SM00962	SRP54-type protein, GTPase domain
SG48_RS17920	SM00963	SRP54-type protein, helical bundle domain
SG48_RS17995	SM00382	ATPases associated with a variety of cellular activities
SG48_RS18000	SM00382	ATPases associated with a variety of cellular activities
SG48_RS18035	SM00382	ATPases associated with a variety of cellular activities
SG48_RS18125	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SG48_RS18160	SM00421	helix_turn_helix, Lux Regulon
SG48_RS18205	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS18210	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS18220	SM01235	SG48_RS18220
SG48_RS18230	SM00421	helix_turn_helix, Lux Regulon
SG48_RS18255	SM00052	Putative diguanylate phosphodiesterase
SG48_RS18280	SM00052	Putative diguanylate phosphodiesterase
SG48_RS18280	SM00267	diguanylate cyclase
SG48_RS18285	SM00028	Tetratricopeptide repeats
SG48_RS18345	SM00382	ATPases associated with a variety of cellular activities
SG48_RS18350	SM00382	ATPases associated with a variety of cellular activities
SG48_RS18430	SM00530	Helix-turn-helix XRE-family like proteins 
SG48_RS18435	SM00357	Cold shock protein domain
SG48_RS18500	SM00382	ATPases associated with a variety of cellular activities
SG48_RS18510	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS18515	SM00047	Lysozyme subfamily 2
SG48_RS18520	SM00642	Alpha-amylase domain
SG48_RS18540	SM00346	helix_turn_helix isocitrate lyase regulation
SG48_RS18575	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SG48_RS18585	SM01007	Class II Aldolase and Adducin N-terminal domain
SG48_RS18705	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SG48_RS18705	SM00895	SG48_RS18705
SG48_RS18720	SM00971	Serine acetyltransferase, N-terminal
SG48_RS18740	SM00450	Rhodanese Homology Domain
SG48_RS18765	SM00829	Enoylreductase
SG48_RS18860	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
SG48_RS18860	SM01232	SG48_RS18860
SG48_RS18920	SM00532	Ligase N family
SG48_RS18925	SM00072	Guanylate kinase homologues.
SG48_RS18930	SM01409	SG48_RS18930
SG48_RS18935	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SG48_RS18935	SM00954	Region found in RelA / SpoT proteins
SG48_RS18945	SM00487	DEAD-like helicases superfamily
SG48_RS18945	SM00490	helicase superfamily c-terminal domain
SG48_RS19040	SM00387	Histidine kinase-like ATPases
SG48_RS19045	SM00421	helix_turn_helix, Lux Regulon
SG48_RS19045	SM00448	cheY-homologous receiver domain
SG48_RS19115	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS19135	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SG48_RS19135	SM00866	SG48_RS19135
SG48_RS19175	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SG48_RS19190	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SG48_RS19190	SM00895	SG48_RS19190
SG48_RS19215	SM00387	Histidine kinase-like ATPases
SG48_RS19215	SM00433	TopoisomeraseII
SG48_RS19225	SM00480	DNA polymerase III beta subunit
SG48_RS19230	SM00382	ATPases associated with a variety of cellular activities
SG48_RS19230	SM00760	Bacterial dnaA protein helix-turn-helix domain
SG48_RS19245	SM01234	SG48_RS19245
SG48_RS19340	SM01061	CAT RNA binding domain
SG48_RS19350	SM00382	ATPases associated with a variety of cellular activities
SG48_RS19385	SM00382	ATPases associated with a variety of cellular activities
SG48_RS19430	SM01228	SG48_RS19430
SG48_RS19440	SM00344	helix_turn_helix ASNC type
SG48_RS19450	SM00327	von Willebrand factor (vWF) type A domain
SG48_RS19455	SM00382	ATPases associated with a variety of cellular activities
SG48_RS19470	SM00382	ATPases associated with a variety of cellular activities
SG48_RS19490	SM00354	helix_turn _helix lactose operon repressor
SG48_RS19500	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SG48_RS19500	SM00895	SG48_RS19500
SG48_RS19545	SM00382	ATPases associated with a variety of cellular activities
SG48_RS19610	SM00487	DEAD-like helicases superfamily
SG48_RS19610	SM00490	helicase superfamily c-terminal domain
SG48_RS19625	SM00357	Cold shock protein domain
SG48_RS19625	SM00382	ATPases associated with a variety of cellular activities
SG48_RS19625	SM00959	Rho termination factor, N-terminal domain
SG48_RS19650	SM00984	UDP binding domain
SG48_RS19755	SM01219	SG48_RS19755
SG48_RS19830	SM00341	Helicase and RNase D C-terminal
SG48_RS19830	SM00487	DEAD-like helicases superfamily
SG48_RS19830	SM00490	helicase superfamily c-terminal domain
SG48_RS19830	SM00956	SG48_RS19830
SG48_RS19920	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
SG48_RS20020	SM00563	Phosphate acyltransferases
SG48_RS20030	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SG48_RS20030	SM00474	3'-5' exonuclease
SG48_RS20030	SM00475	5'-3' exonuclease
SG48_RS20030	SM00482	DNA polymerase A domain
SG48_RS20045	SM00729	Elongator protein 3, MiaB family, Radical SAM
SG48_RS20055	SM00382	ATPases associated with a variety of cellular activities
SG48_RS20055	SM00448	cheY-homologous receiver domain
SG48_RS20060	SM00091	PAS domain
SG48_RS20060	SM00387	Histidine kinase-like ATPases
SG48_RS20060	SM00388	His Kinase A (phosphoacceptor) domain
SG48_RS20065	SM01230	SG48_RS20065
SG48_RS20080	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SG48_RS20080	SM00866	SG48_RS20080
SG48_RS20125	SM01133	SG48_RS20125
SG48_RS20140	SM00420	helix_turn_helix, Deoxyribose operon repressor
SG48_RS20140	SM01134	SG48_RS20140
SG48_RS20200	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SG48_RS20240	SM01007	Class II Aldolase and Adducin N-terminal domain
SG48_RS20260	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS20265	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS20295	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SG48_RS20295	SM00387	Histidine kinase-like ATPases
SG48_RS20295	SM00388	His Kinase A (phosphoacceptor) domain
SG48_RS20300	SM00448	cheY-homologous receiver domain
SG48_RS20300	SM00862	Transcriptional regulatory protein, C terminal
SG48_RS20390	SM00382	ATPases associated with a variety of cellular activities
SG48_RS20390	SM01086	C-terminal, D2-small domain, of ClpB protein
SG48_RS20405	SM00354	helix_turn _helix lactose operon repressor
SG48_RS20410	SM00487	DEAD-like helicases superfamily
SG48_RS20410	SM00490	helicase superfamily c-terminal domain
SG48_RS20510	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS20535	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SG48_RS20655	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
SG48_RS20655	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SG48_RS20660	SM00649	Ribosomal protein L11/L12
SG48_RS20685	SM00663	RNA polymerase I subunit A N-terminus
SG48_RS20695	SM00876	Biotin and Thiamin Synthesis associated domain
SG48_RS20750	SM00411	bacterial (prokaryotic) histone like domain
SG48_RS20765	SM00387	Histidine kinase-like ATPases
SG48_RS20765	SM00388	His Kinase A (phosphoacceptor) domain
SG48_RS20770	SM00382	ATPases associated with a variety of cellular activities
SG48_RS20770	SM00448	cheY-homologous receiver domain
SG48_RS20775	SM01209	SG48_RS20775
SG48_RS20775	SM01210	SG48_RS20775
SG48_RS20780	SM00798	AICARFT/IMPCHase bienzyme
SG48_RS20780	SM00851	MGS-like domain
SG48_RS20815	SM00248	ankyrin repeats
SG48_RS20820	SM00346	helix_turn_helix isocitrate lyase regulation
SG48_RS20825	SM01018	B12 binding domain
SG48_RS20840	SM00363	S4 RNA-binding domain
SG48_RS20920	SM00382	ATPases associated with a variety of cellular activities
SG48_RS20955	SM00563	Phosphate acyltransferases
SG48_RS21005	SM00829	Enoylreductase
SG48_RS21010	SM00382	ATPases associated with a variety of cellular activities
SG48_RS21015	SM01005	Alanine racemase, C-terminal domain
SG48_RS21060	SM00052	Putative diguanylate phosphodiesterase
SG48_RS21065	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS21070	SM00422	helix_turn_helix, mercury resistance
SG48_RS21135	SM00028	Tetratricopeptide repeats
SG48_RS21145	SM00671	Sel1-like repeats.
SG48_RS21155	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SG48_RS21180	SM00849	Metallo-beta-lactamase superfamily
SG48_RS21200	SM00382	ATPases associated with a variety of cellular activities
SG48_RS21235	SM00072	Guanylate kinase homologues.
SG48_RS21245	SM00382	ATPases associated with a variety of cellular activities
SG48_RS21250	SM00382	ATPases associated with a variety of cellular activities
SG48_RS21275	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SG48_RS21275	SM00866	SG48_RS21275
SG48_RS21290	SM00382	ATPases associated with a variety of cellular activities
SG48_RS21325	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SG48_RS21325	SM00387	Histidine kinase-like ATPases
SG48_RS21325	SM00388	His Kinase A (phosphoacceptor) domain
SG48_RS21330	SM00448	cheY-homologous receiver domain
SG48_RS21330	SM00862	Transcriptional regulatory protein, C terminal
SG48_RS21345	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS21355	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS21395	SM00448	cheY-homologous receiver domain
SG48_RS21400	SM00091	PAS domain
SG48_RS21400	SM00387	Histidine kinase-like ATPases
SG48_RS21450	SM00862	Transcriptional regulatory protein, C terminal
SG48_RS21495	SM00883	Chaperonin 10 Kd subunit
SG48_RS21520	SM00841	Elongation factor P, C-terminal
SG48_RS21520	SM01185	SG48_RS21520
SG48_RS21605	SM00479	SG48_RS21605
SG48_RS21640	SM00646	SG48_RS21640
SG48_RS21645	SM00853	MutL C terminal dimerisation domain
SG48_RS21645	SM01340	SG48_RS21645
SG48_RS21665	SM00244	prohibitin homologues
SG48_RS21670	SM00244	prohibitin homologues
SG48_RS21680	SM00788	Adenylosuccinate synthetase
SG48_RS21690	SM00316	Ribosomal protein S1-like RNA-binding domain
SG48_RS21690	SM00357	Cold shock protein domain
SG48_RS21690	SM00955	SG48_RS21690
SG48_RS21695	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SG48_RS21750	SM00420	helix_turn_helix, Deoxyribose operon repressor
SG48_RS21750	SM01134	SG48_RS21750
SG48_RS21775	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SG48_RS21785	SM01007	Class II Aldolase and Adducin N-terminal domain
SG48_RS21890	SM01091	Transporter associated domain
SG48_RS21920	SM00966	SpoVT / AbrB like domain 
SG48_RS21940	SM00382	ATPases associated with a variety of cellular activities
SG48_RS21990	SM00642	Alpha-amylase domain
SG48_RS22000	SM00354	helix_turn _helix lactose operon repressor
SG48_RS22005	SM00831	Cation transporter/ATPase, N-terminus
SG48_RS22040	SM00822	SG48_RS22040
SG48_RS22110	SM00354	helix_turn _helix lactose operon repressor
SG48_RS22135	SM00829	Enoylreductase
SG48_RS22235	SM00382	ATPases associated with a variety of cellular activities
SG48_RS22255	SM00965	Secretin and TonB N terminus short domain
SG48_RS22305	SM01130	SG48_RS22305
SG48_RS22310	SM00346	helix_turn_helix isocitrate lyase regulation
SG48_RS22315	SM00420	helix_turn_helix, Deoxyribose operon repressor
SG48_RS22315	SM01134	SG48_RS22315
SG48_RS22480	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SG48_RS22480	SM00895	SG48_RS22480
SG48_RS22575	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SG48_RS22600	SM00382	ATPases associated with a variety of cellular activities
SG48_RS22620	SM00487	DEAD-like helicases superfamily
SG48_RS22620	SM00490	helicase superfamily c-terminal domain
SG48_RS22630	SM00833	Cobalamin synthesis protein cobW C-terminal domain
SG48_RS22650	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
SG48_RS22650	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SG48_RS22650	SM00319	Homologues of the ligand binding domain of Tar
SG48_RS22660	SM00895	SG48_RS22660
SG48_RS22665	SM00829	Enoylreductase
SG48_RS22680	SM00382	ATPases associated with a variety of cellular activities
SG48_RS22700	SM00421	helix_turn_helix, Lux Regulon
SG48_RS22705	SM00421	helix_turn_helix, Lux Regulon
SG48_RS22760	SM00749	bacterial OsmY and nodulation domain
SG48_RS22795	SM01133	SG48_RS22795
SG48_RS22800	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
SG48_RS22835	SM00382	ATPases associated with a variety of cellular activities
SG48_RS22840	SM00530	Helix-turn-helix XRE-family like proteins 
SG48_RS22850	SM00382	ATPases associated with a variety of cellular activities
SG48_RS22870	SM00855	Phosphoglycerate mutase family
SG48_RS22875	SM00342	helix_turn_helix, arabinose operon control protein
SG48_RS22875	SM00871	Bacterial transcription activator, effector binding domain
SG48_RS22885	SM00448	cheY-homologous receiver domain
SG48_RS22885	SM00862	Transcriptional regulatory protein, C terminal
SG48_RS22890	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SG48_RS22890	SM00387	Histidine kinase-like ATPases
SG48_RS22890	SM00388	His Kinase A (phosphoacceptor) domain
SG48_RS22900	SM00448	cheY-homologous receiver domain
SG48_RS22900	SM00862	Transcriptional regulatory protein, C terminal
