locus-tag class description CF59_RS00025 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CF59_RS00030 PF12804 MobA-like NTP transferase domain CF59_RS00035 PF06288 Protein of unknown function (DUF1040) CF59_RS00040 PF01636 Phosphotransferase enzyme family CF59_RS00045 PF01323 DSBA-like thioredoxin domain CF59_RS00050 PF06097 Bacterial protein of unknown function (DUF945) CF59_RS00055 PF01553 Acyltransferase CF59_RS00065 PF01612 3'-5' exonuclease CF59_RS00065 PF00476 DNA polymerase family A CF59_RS00065 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CF59_RS00065 PF01367 5'-3' exonuclease, C-terminal SAM fold CF59_RS00070 PF01926 50S ribosome-binding GTPase CF59_RS00075 PF04220 Der GTPase activator (YihI) CF59_RS00080 PF06969 HemN C-terminal domain CF59_RS00080 PF04055 Radical SAM superfamily CF59_RS00090 PF02954 Bacterial regulatory protein, Fis family CF59_RS00090 PF00158 Sigma-54 interaction domain CF59_RS00090 PF00072 Response regulator receiver domain CF59_RS00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS00095 PF00989 PAS fold CF59_RS00095 PF00512 His Kinase A (phospho-acceptor) domain CF59_RS00100 PF00120 Glutamine synthetase, catalytic domain CF59_RS00100 PF03951 Glutamine synthetase, beta-Grasp domain CF59_RS00110 PF00679 Elongation factor G C-terminus CF59_RS00110 PF03144 Elongation factor Tu domain 2 CF59_RS00110 PF00009 Elongation factor Tu GTP binding domain CF59_RS00115 PF00392 Bacterial regulatory proteins, gntR family CF59_RS00115 PF07702 UTRA domain CF59_RS00120 PF01261 Xylose isomerase-like TIM barrel CF59_RS00125 PF07690 Major Facilitator Superfamily CF59_RS00130 PF06178 Oligogalacturonate-specific porin protein (KdgM) CF59_RS00145 PF01055 Glycosyl hydrolases family 31 CF59_RS00155 PF01263 Aldose 1-epimerase CF59_RS00165 PF01791 DeoC/LacD family aldolase CF59_RS00170 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CF59_RS00170 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CF59_RS00175 PF00294 pfkB family carbohydrate kinase CF59_RS00180 PF00455 DeoR C terminal sensor domain CF59_RS00180 PF08220 DeoR-like helix-turn-helix domain CF59_RS00185 PF13419 Haloacid dehalogenase-like hydrolase CF59_RS00190 PF03631 Virulence factor BrkB CF59_RS00195 PF02580 D-Tyr-tRNA(Tyr) deacylase CF59_RS00200 PF09500 Putative thioesterase (yiiD_Cterm) CF59_RS00200 PF00583 Acetyltransferase (GNAT) family CF59_RS00215 PF01402 Ribbon-helix-helix protein, copG family CF59_RS00220 PF04216 Protein involved in formate dehydrogenase formation CF59_RS00225 PF01292 Prokaryotic cytochrome b561 CF59_RS00230 PF09163 Formate dehydrogenase N, transmembrane CF59_RS00230 PF13247 4Fe-4S dicluster domain CF59_RS00235 PF01568 Molydopterin dinucleotide binding domain CF59_RS00235 PF00384 Molybdopterin oxidoreductase CF59_RS00235 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF59_RS00240 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF59_RS00240 PF00384 Molybdopterin oxidoreductase CF59_RS00240 PF01568 Molydopterin dinucleotide binding domain CF59_RS00245 PF02634 FdhD/NarQ family CF59_RS00250 PF12889 Protein of unknown function (DUF3829) CF59_RS00255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF59_RS00255 PF08279 HTH domain CF59_RS00260 PF05343 M42 glutamyl aminopeptidase CF59_RS00265 PF02378 Phosphotransferase system, EIIC CF59_RS00265 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF59_RS00270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF59_RS00280 PF05336 L-rhamnose mutarotase CF59_RS00285 PF00596 Class II Aldolase and Adducin N-terminal domain CF59_RS00290 PF06134 L-rhamnose isomerase (RhaA) CF59_RS00295 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CF59_RS00295 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CF59_RS00305 PF02311 AraC-like ligand binding domain CF59_RS00305 PF12833 Helix-turn-helix domain CF59_RS00310 PF12833 Helix-turn-helix domain CF59_RS00310 PF02311 AraC-like ligand binding domain CF59_RS00315 PF06379 L-rhamnose-proton symport protein (RhaT) CF59_RS00320 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CF59_RS00320 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CF59_RS00330 PF03812 2-keto-3-deoxygluconate permease CF59_RS00335 PF03475 3-alpha domain CF59_RS00335 PF03473 MOSC domain CF59_RS00350 PF13276 HTH-like domain CF59_RS00350 PF13333 Integrase core domain CF59_RS00350 PF00665 Integrase core domain CF59_RS00355 PF16527 Two-component sensor protein CpxA, periplasmic domain CF59_RS00355 PF00672 HAMP domain CF59_RS00355 PF00512 His Kinase A (phospho-acceptor) domain CF59_RS00355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS00360 PF00486 Transcriptional regulatory protein, C terminal CF59_RS00360 PF00072 Response regulator receiver domain CF59_RS00365 PF07813 LTXXQ motif family protein CF59_RS00370 PF16916 Dimerisation domain of Zinc Transporter CF59_RS00370 PF01545 Cation efflux family CF59_RS00375 PF00365 Phosphofructokinase CF59_RS00385 PF02611 CDP-diacylglycerol pyrophosphatase CF59_RS00390 PF00121 Triosephosphate isomerase CF59_RS00395 PF07305 Protein of unknown function (DUF1454) CF59_RS00400 PF05656 Protein of unknown function (DUF805) CF59_RS00405 PF04175 Protein of unknown function (DUF406) CF59_RS00410 PF00582 Universal stress protein family CF59_RS00415 PF00175 Oxidoreductase NAD-binding domain CF59_RS00415 PF00970 Oxidoreductase FAD-binding domain CF59_RS00420 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CF59_RS00425 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CF59_RS00425 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CF59_RS00430 PF00230 Major intrinsic protein CF59_RS00435 PF06005 Cell division protein ZapB CF59_RS00440 PF03737 Aldolase/RraA CF59_RS00445 PF01040 UbiA prenyltransferase family CF59_RS00450 PF00004 ATPase family associated with various cellular activities (AAA) CF59_RS00450 PF10431 C-terminal, D2-small domain, of ClpB protein CF59_RS00450 PF07724 AAA domain (Cdc48 subfamily) CF59_RS00455 PF00227 Proteasome subunit CF59_RS00460 PF05036 Sporulation related domain CF59_RS00465 PF00356 Bacterial regulatory proteins, lacI family CF59_RS00470 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CF59_RS00470 PF00270 DEAD/DEAH box helicase CF59_RS00470 PF18074 Primosomal protein N C-terminal domain CF59_RS00470 PF00271 Helicase conserved C-terminal domain CF59_RS00470 PF17764 3′ DNA-binding domain (3′BD) CF59_RS00475 PF01197 Ribosomal protein L31 CF59_RS00495 PF01609 Transposase DDE domain CF59_RS00495 PF13808 DDE_Tnp_1-associated CF59_RS00505 PF05593 RHS Repeat CF59_RS00505 PF03527 RHS protein CF59_RS00505 PF14220 Domain of unknown function (DUF4329) CF59_RS00515 PF03400 IS1 transposase CF59_RS00520 PF03400 IS1 transposase CF59_RS00525 PF12759 InsA C-terminal domain CF59_RS00525 PF03811 InsA N-terminal domain CF59_RS00530 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CF59_RS00535 PF01340 Met Apo-repressor, MetJ CF59_RS00540 PF01053 Cys/Met metabolism PLP-dependent enzyme CF59_RS00545 PF00742 Homoserine dehydrogenase CF59_RS00545 PF00696 Amino acid kinase family CF59_RS00545 PF03447 Homoserine dehydrogenase, NAD binding domain CF59_RS00555 PF02872 5'-nucleotidase, C-terminal domain CF59_RS00555 PF00149 Calcineurin-like phosphoesterase CF59_RS00560 PF02219 Methylenetetrahydrofolate reductase CF59_RS00565 PF00141 Peroxidase CF59_RS00570 PF00892 EamA-like transporter family CF59_RS00575 PF06940 Domain of unknown function (DUF1287) CF59_RS00580 PF00465 Iron-containing alcohol dehydrogenase CF59_RS00585 PF00923 Transaldolase/Fructose-6-phosphate aldolase CF59_RS00590 PF02896 PEP-utilising enzyme, TIM barrel domain CF59_RS00590 PF00391 PEP-utilising enzyme, mobile domain CF59_RS00590 PF05524 PEP-utilising enzyme, N-terminal CF59_RS00590 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF59_RS00590 PF00381 PTS HPr component phosphorylation site CF59_RS00600 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF59_RS00605 PF02901 Pyruvate formate lyase-like CF59_RS00605 PF01228 Glycine radical CF59_RS00610 PF04055 Radical SAM superfamily CF59_RS00615 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF59_RS00620 PF12833 Helix-turn-helix domain CF59_RS00625 PF00884 Sulfatase CF59_RS00630 PF00311 Phosphoenolpyruvate carboxylase CF59_RS00635 PF01546 Peptidase family M20/M25/M40 CF59_RS00635 PF07687 Peptidase dimerisation domain CF59_RS00640 PF02774 Semialdehyde dehydrogenase, dimerisation domain CF59_RS00640 PF01118 Semialdehyde dehydrogenase, NAD binding domain CF59_RS00645 PF00696 Amino acid kinase family CF59_RS00650 PF00206 Lyase CF59_RS00650 PF14698 Argininosuccinate lyase C-terminal CF59_RS00655 PF03466 LysR substrate binding domain CF59_RS00655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS00660 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF59_RS00660 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CF59_RS00665 PF00440 Bacterial regulatory proteins, tetR family CF59_RS00670 PF07226 Protein of unknown function (DUF1422) CF59_RS00675 PF05958 tRNA (Uracil-5-)-methyltransferase CF59_RS00680 PF00593 TonB dependent receptor CF59_RS00680 PF07715 TonB-dependent Receptor Plug Domain CF59_RS00685 PF01177 Asp/Glu/Hydantoin racemase CF59_RS00715 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CF59_RS00715 PF01565 FAD binding domain CF59_RS00720 PF08279 HTH domain CF59_RS00720 PF03099 Biotin/lipoate A/B protein ligase family CF59_RS00720 PF02237 Biotin protein ligase C terminal domain CF59_RS00725 PF00485 Phosphoribulokinase / Uridine kinase family CF59_RS00755 PF03144 Elongation factor Tu domain 2 CF59_RS00755 PF00009 Elongation factor Tu GTP binding domain CF59_RS00755 PF03143 Elongation factor Tu C-terminal domain CF59_RS00760 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CF59_RS00765 PF00467 KOW motif CF59_RS00765 PF02357 Transcription termination factor nusG CF59_RS00770 PF03946 Ribosomal protein L11, N-terminal domain CF59_RS00770 PF00298 Ribosomal protein L11, RNA binding domain CF59_RS00775 PF00687 Ribosomal protein L1p/L10e family CF59_RS00780 PF00466 Ribosomal protein L10 CF59_RS00785 PF00542 Ribosomal protein L7/L12 C-terminal domain CF59_RS00785 PF16320 Ribosomal protein L7/L12 dimerisation domain CF59_RS00790 PF04563 RNA polymerase beta subunit CF59_RS00790 PF04561 RNA polymerase Rpb2, domain 2 CF59_RS00790 PF04565 RNA polymerase Rpb2, domain 3 CF59_RS00790 PF10385 RNA polymerase beta subunit external 1 domain CF59_RS00790 PF04560 RNA polymerase Rpb2, domain 7 CF59_RS00790 PF00562 RNA polymerase Rpb2, domain 6 CF59_RS00795 PF00623 RNA polymerase Rpb1, domain 2 CF59_RS00795 PF04983 RNA polymerase Rpb1, domain 3 CF59_RS00795 PF05000 RNA polymerase Rpb1, domain 4 CF59_RS00795 PF04998 RNA polymerase Rpb1, domain 5 CF59_RS00795 PF04997 RNA polymerase Rpb1, domain 1 CF59_RS00800 PF06968 Biotin and Thiamin Synthesis associated domain CF59_RS00800 PF04055 Radical SAM superfamily CF59_RS00805 PF05690 Thiazole biosynthesis protein ThiG CF59_RS00810 PF02597 ThiS family CF59_RS00815 PF00899 ThiF family CF59_RS00820 PF02581 Thiamine monophosphate synthase CF59_RS00825 PF01964 Radical SAM ThiC family CF59_RS00825 PF13667 ThiC-associated domain CF59_RS00830 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CF59_RS00835 PF00293 NUDIX domain CF59_RS00835 PF09297 NADH pyrophosphatase zinc ribbon domain CF59_RS00840 PF01208 Uroporphyrinogen decarboxylase (URO-D) CF59_RS00845 PF04493 Endonuclease V CF59_RS00850 PF04222 Protein of unknown function (DUF416) CF59_RS00855 PF00216 Bacterial DNA-binding protein CF59_RS00860 PF07356 Protein of unknown function (DUF1481) CF59_RS00865 PF13801 Heavy-metal resistance CF59_RS00870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS00870 PF00512 His Kinase A (phospho-acceptor) domain CF59_RS00875 PF00158 Sigma-54 interaction domain CF59_RS00875 PF00072 Response regulator receiver domain CF59_RS00875 PF02954 Bacterial regulatory protein, Fis family CF59_RS00880 PF02843 Phosphoribosylglycinamide synthetase, C domain CF59_RS00880 PF02844 Phosphoribosylglycinamide synthetase, N domain CF59_RS00880 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CF59_RS00885 PF01808 AICARFT/IMPCHase bienzyme CF59_RS00885 PF02142 MGS-like domain CF59_RS00930 PF13673 Acetyltransferase (GNAT) domain CF59_RS00935 PF04204 Homoserine O-succinyltransferase CF59_RS00940 PF01274 Malate synthase CF59_RS00945 PF00463 Isocitrate lyase family CF59_RS00950 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CF59_RS00955 PF07906 ShET2 enterotoxin, N-terminal region CF59_RS00960 PF01614 Bacterial transcriptional regulator CF59_RS00960 PF09339 IclR helix-turn-helix domain CF59_RS00965 PF02310 B12 binding domain CF59_RS00965 PF02574 Homocysteine S-methyltransferase CF59_RS00965 PF02607 B12 binding domain CF59_RS00965 PF02965 Vitamin B12 dependent methionine synthase, activation domain CF59_RS00965 PF00809 Pterin binding enzyme CF59_RS00980 PF02690 Na+/Pi-cotransporter CF59_RS00985 PF03575 Peptidase family S51 CF59_RS00995 PF08240 Alcohol dehydrogenase GroES-like domain CF59_RS00995 PF00107 Zinc-binding dehydrogenase CF59_RS01000 PF03613 PTS system mannose/fructose/sorbose family IID component CF59_RS01005 PF03609 PTS system sorbose-specific iic component CF59_RS01010 PF03830 PTS system sorbose subfamily IIB component CF59_RS01015 PF03610 PTS system fructose IIA component CF59_RS01020 PF00106 short chain dehydrogenase CF59_RS01025 PF04198 Putative sugar-binding domain CF59_RS01025 PF13936 Helix-turn-helix domain CF59_RS01030 PF00849 RNA pseudouridylate synthase CF59_RS01030 PF01479 S4 domain CF59_RS01035 PF11656 YjbD family (DUF3811) CF59_RS01040 PF00696 Amino acid kinase family CF59_RS01040 PF01842 ACT domain CF59_RS01045 PF00342 Phosphoglucose isomerase CF59_RS01050 PF11106 Exopolysaccharide production protein YjbE CF59_RS01055 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF CF59_RS01060 PF06251 Capsule biosynthesis GfcC CF59_RS01065 PF06082 Exopolysaccharide biosynthesis protein YbjH CF59_RS01070 PF17089 Uncharacterised protein family CF59_RS01080 PF06146 Phosphate-starvation-inducible E CF59_RS01085 PF00083 Sugar (and other) transporter CF59_RS01090 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS01095 PF14785 Maltose transport system permease protein MalF P2 domain CF59_RS01095 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS01100 PF01547 Bacterial extracellular solute-binding protein CF59_RS01110 PF00005 ABC transporter CF59_RS01110 PF17912 MalK OB fold domain CF59_RS01115 PF02264 LamB porin CF59_RS01120 PF07148 Maltose operon periplasmic protein precursor (MalM) CF59_RS01125 PF13981 SopA-like central domain CF59_RS01125 PF13599 Pentapeptide repeats (9 copies) CF59_RS01130 PF04345 Chorismate lyase CF59_RS01135 PF01040 UbiA prenyltransferase family CF59_RS01140 PF01553 Acyltransferase CF59_RS01145 PF01219 Prokaryotic diacylglycerol kinase CF59_RS01150 PF01726 LexA DNA binding domain CF59_RS01150 PF00717 Peptidase S24-like CF59_RS01155 PF01554 MatE CF59_RS01160 PF05532 CsbD-like CF59_RS01165 PF01475 Ferric uptake regulator family CF59_RS01175 PF10897 Protein of unknown function (DUF2713) CF59_RS01180 PF01207 Dihydrouridine synthase (Dus) CF59_RS01185 PF09583 Phage shock protein G (Phageshock_PspG) CF59_RS01190 PF00107 Zinc-binding dehydrogenase CF59_RS01190 PF08240 Alcohol dehydrogenase GroES-like domain CF59_RS01195 PF00772 DnaB-like helicase N terminal domain CF59_RS01195 PF03796 DnaB-like helicase C terminal domain CF59_RS01200 PF00842 Alanine racemase, C-terminal domain CF59_RS01200 PF01168 Alanine racemase, N-terminal domain CF59_RS01205 PF00155 Aminotransferase class I and II CF59_RS01215 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CF59_RS01220 PF01894 Uncharacterised protein family UPF0047 CF59_RS01225 PF04237 YjbR CF59_RS01230 PF17755 UvrA DNA-binding domain CF59_RS01230 PF00005 ABC transporter CF59_RS01230 PF17760 UvrA interaction domain CF59_RS01235 PF00436 Single-strand binding protein family CF59_RS01240 PF15940 Family of unknown function CF59_RS01245 PF00563 EAL domain CF59_RS01245 PF12792 CSS motif domain associated with EAL CF59_RS01250 PF12833 Helix-turn-helix domain CF59_RS01255 PF09278 MerR, DNA binding CF59_RS01255 PF00376 MerR family regulatory protein CF59_RS01260 PF00860 Permease family CF59_RS01265 PF00999 Sodium/hydrogen exchanger family CF59_RS01270 PF00805 Pentapeptide repeats (8 copies) CF59_RS01275 PF00474 Sodium:solute symporter family CF59_RS01280 PF04341 Protein of unknown function, DUF485 CF59_RS01285 PF13193 AMP-binding enzyme C-terminal domain CF59_RS01285 PF16177 Acetyl-coenzyme A synthetase N-terminus CF59_RS01285 PF00501 AMP-binding enzyme CF59_RS01290 PF02335 Cytochrome c552 CF59_RS01295 PF13435 Cytochrome c554 and c-prime CF59_RS01295 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) CF59_RS01300 PF00037 4Fe-4S binding domain CF59_RS01300 PF13247 4Fe-4S dicluster domain CF59_RS01305 PF03916 Polysulphide reductase, NrfD CF59_RS01310 PF01578 Cytochrome C assembly protein CF59_RS01310 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CF59_RS01315 PF03918 Cytochrome C biogenesis protein CF59_RS01325 PF00375 Sodium:dicarboxylate symporter family CF59_RS01330 PF08238 Sel1 repeat CF59_RS01335 PF00384 Molybdopterin oxidoreductase CF59_RS01335 PF01568 Molydopterin dinucleotide binding domain CF59_RS01335 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF59_RS01340 PF00384 Molybdopterin oxidoreductase CF59_RS01340 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF59_RS01340 PF01568 Molydopterin dinucleotide binding domain CF59_RS01345 PF02321 Outer membrane efflux protein CF59_RS01350 PF04632 Fusaric acid resistance protein family CF59_RS01355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF59_RS01355 PF00529 HlyD membrane-fusion protein of T1SS CF59_RS01360 PF17090 Uncharacterised protein family CF59_RS01365 PF14863 Alkyl sulfatase dimerisation CF59_RS01365 PF14864 Alkyl sulfatase C-terminal CF59_RS01365 PF00753 Metallo-beta-lactamase superfamily CF59_RS01370 PF00480 ROK family CF59_RS01375 PF00834 Ribulose-phosphate 3 epimerase family CF59_RS01380 PF02653 Branched-chain amino acid transport system / permease component CF59_RS01385 PF00005 ABC transporter CF59_RS01390 PF13407 Periplasmic binding protein domain CF59_RS01395 PF01380 SIS domain CF59_RS01395 PF01418 Helix-turn-helix domain, rpiR family CF59_RS01400 PF02502 Ribose/Galactose Isomerase CF59_RS01410 PF12706 Beta-lactamase superfamily domain CF59_RS01415 PF00583 Acetyltransferase (GNAT) family CF59_RS01425 PF07969 Amidohydrolase family CF59_RS01430 PF00005 ABC transporter CF59_RS01435 PF00005 ABC transporter CF59_RS01440 PF06007 Phosphonate metabolism protein PhnJ CF59_RS01445 PF05861 Bacterial phosphonate metabolism protein (PhnI) CF59_RS01450 PF05845 Bacterial phosphonate metabolism protein (PhnH) CF59_RS01455 PF06754 Phosphonate metabolism protein PhnG CF59_RS01460 PF00392 Bacterial regulatory proteins, gntR family CF59_RS01460 PF07702 UTRA domain CF59_RS01465 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS01475 PF00005 ABC transporter CF59_RS01480 PF06983 3-demethylubiquinone-9 3-methyltransferase CF59_RS01485 PF03831 PhnA domain CF59_RS01485 PF08274 PhnA Zinc-Ribbon CF59_RS01490 PF00350 Dynamin family CF59_RS01495 PF13990 YjcZ-like protein CF59_RS01500 PF00083 Sugar (and other) transporter CF59_RS01500 PF08946 Osmosensory transporter coiled coil CF59_RS01510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS01510 PF00512 His Kinase A (phospho-acceptor) domain CF59_RS01515 PF00486 Transcriptional regulatory protein, C terminal CF59_RS01515 PF00072 Response regulator receiver domain CF59_RS01520 PF08019 Phosphoethanolamine transferase EptA/EptB CF59_RS01520 PF00884 Sulfatase CF59_RS01525 PF13520 Amino acid permease CF59_RS01530 PF12833 Helix-turn-helix domain CF59_RS01535 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CF59_RS01535 PF01276 Orn/Lys/Arg decarboxylase, major domain CF59_RS01535 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CF59_RS01540 PF12833 Helix-turn-helix domain CF59_RS01550 PF02056 Family 4 glycosyl hydrolase CF59_RS01550 PF11975 Family 4 glycosyl hydrolase C-terminal domain CF59_RS01565 PF09997 Predicted membrane protein (DUF2238) CF59_RS01570 PF05683 Fumarase C-terminus CF59_RS01570 PF05681 Fumarate hydratase (Fumerase) CF59_RS01575 PF03605 Anaerobic c4-dicarboxylate membrane transporter CF59_RS01585 PF00072 Response regulator receiver domain CF59_RS01590 PF00989 PAS fold CF59_RS01590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS01590 PF17203 Single cache domain 3 CF59_RS01590 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CF59_RS01595 PF06902 Divergent 4Fe-4S mono-cluster CF59_RS01600 PF14542 GCN5-related N-acetyl-transferase CF59_RS01605 PF11080 Endoribonuclease GhoS CF59_RS01610 PF10753 Toxin GhoT_OrtT CF59_RS01615 PF00152 tRNA synthetases class II (D, K and N) CF59_RS01615 PF01336 OB-fold nucleic acid binding domain CF59_RS01620 PF00854 POT family CF59_RS01625 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CF59_RS01625 PF01276 Orn/Lys/Arg decarboxylase, major domain CF59_RS01625 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CF59_RS01630 PF13520 Amino acid permease CF59_RS01635 PF00486 Transcriptional regulatory protein, C terminal CF59_RS01635 PF18500 CadC C-terminal domain 1 CF59_RS01650 PF11412 Disulphide bond corrector protein DsbC CF59_RS01650 PF02683 Cytochrome C biogenesis protein transmembrane region CF59_RS01655 PF03091 CutA1 divalent ion tolerance protein CF59_RS01660 PF03605 Anaerobic c4-dicarboxylate membrane transporter CF59_RS01665 PF10415 Fumarase C C-terminus CF59_RS01665 PF00206 Lyase CF59_RS01670 PF04186 FxsA cytoplasmic membrane protein CF59_RS01675 PF13520 Amino acid permease CF59_RS01680 PF00166 Chaperonin 10 Kd subunit CF59_RS01685 PF00118 TCP-1/cpn60 chaperonin family CF59_RS01690 PF13698 Domain of unknown function (DUF4156) CF59_RS01695 PF15922 YjeJ-like CF59_RS01700 PF04055 Radical SAM superfamily CF59_RS01705 PF09285 Elongation factor P, C-terminal CF59_RS01705 PF01132 Elongation factor P (EF-P) OB domain CF59_RS01705 PF08207 Elongation factor P (EF-P) KOW-like domain CF59_RS01710 PF08085 Entericidin EcnA/B family CF59_RS01715 PF08085 Entericidin EcnA/B family CF59_RS01720 PF00893 Small Multidrug Resistance protein CF59_RS01725 PF08212 Lipocalin-like domain CF59_RS01730 PF00144 Beta-lactamase CF59_RS01735 PF02313 Fumarate reductase subunit D CF59_RS01740 PF02300 Fumarate reductase subunit C CF59_RS01745 PF13085 2Fe-2S iron-sulfur cluster binding domain CF59_RS01745 PF13183 4Fe-4S dicluster domain CF59_RS01750 PF02910 Fumarate reductase flavoprotein C-term CF59_RS01750 PF00890 FAD binding domain CF59_RS01755 PF00152 tRNA synthetases class II (D, K and N) CF59_RS01760 PF13520 Amino acid permease CF59_RS01765 PF00924 Mechanosensitive ion channel CF59_RS01765 PF12795 Mechanosensitive ion channel porin domain CF59_RS01765 PF12794 Mechanosensitive ion channel inner membrane domain 1 CF59_RS01770 PF02666 Phosphatidylserine decarboxylase CF59_RS01775 PF03193 RsgA GTPase CF59_RS01780 PF00929 Exonuclease CF59_RS01800 PF08331 Domain of unknown function (DUF1730) CF59_RS01805 PF03853 YjeF-related protein N-terminus CF59_RS01805 PF01256 Carbohydrate kinase CF59_RS01810 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CF59_RS01815 PF01520 N-acetylmuramoyl-L-alanine amidase CF59_RS01820 PF01119 DNA mismatch repair protein, C-terminal domain CF59_RS01820 PF08676 MutL C terminal dimerisation domain CF59_RS01830 PF17209 Hfq protein CF59_RS01835 PF16360 GTP-binding GTPase Middle Region CF59_RS01835 PF13167 GTP-binding GTPase N-terminal CF59_RS01835 PF01926 50S ribosome-binding GTPase CF59_RS01840 PF01145 SPFH domain / Band 7 family CF59_RS01840 PF12221 Bacterial membrane protein N terminal CF59_RS01845 PF01145 SPFH domain / Band 7 family CF59_RS01850 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CF59_RS01855 PF00709 Adenylosuccinate synthetase CF59_RS01860 PF02082 Transcriptional regulator CF59_RS01865 PF00773 RNB domain CF59_RS01865 PF17876 Cold shock domain CF59_RS01865 PF08461 Ribonuclease R winged-helix domain CF59_RS01865 PF00575 S1 RNA binding domain CF59_RS01865 PF08206 Ribonuclease B OB domain CF59_RS01870 PF00588 SpoU rRNA Methylase family CF59_RS01870 PF08032 RNA 2'-O ribose methyltransferase substrate binding CF59_RS01875 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) CF59_RS01880 PF04012 PspA/IM30 family CF59_RS01885 PF10679 Protein of unknown function (DUF2491) CF59_RS01890 PF03994 Domain of Unknown Function (DUF350) CF59_RS01895 PF06693 Protein of unknown function (DUF1190) CF59_RS01900 PF03738 Glutathionylspermidine synthase preATP-grasp CF59_RS01905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CF59_RS01905 PF02770 Acyl-CoA dehydrogenase, middle domain CF59_RS01905 PF18158 Adaptive response protein AidB N-terminal domain CF59_RS01910 PF07338 Protein of unknown function (DUF1471) CF59_RS01915 PF07338 Protein of unknown function (DUF1471) CF59_RS01920 PF00326 Prolyl oligopeptidase family CF59_RS01925 PF00455 DeoR C terminal sensor domain CF59_RS01925 PF08220 DeoR-like helix-turn-helix domain CF59_RS01935 PF03611 PTS system sugar-specific permease component CF59_RS01940 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF59_RS01945 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF59_RS01950 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CF59_RS01955 PF01261 Xylose isomerase-like TIM barrel CF59_RS01960 PF00596 Class II Aldolase and Adducin N-terminal domain CF59_RS01965 PF07338 Protein of unknown function (DUF1471) CF59_RS01970 PF01250 Ribosomal protein S6 CF59_RS01975 PF00436 Single-strand binding protein family CF59_RS01980 PF01084 Ribosomal protein S18 CF59_RS01985 PF03948 Ribosomal protein L9, C-terminal domain CF59_RS01985 PF01281 Ribosomal protein L9, N-terminal domain CF59_RS01990 PF10887 Protein of unknown function (DUF2686) CF59_RS01995 PF17938 Tetracyclin repressor-like, C-terminal domain CF59_RS02000 PF08525 Opacity-associated protein A N-terminal motif CF59_RS02000 PF04225 Opacity-associated protein A LysM-like domain CF59_RS02005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CF59_RS02005 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CF59_RS02010 PF00324 Amino acid permease CF59_RS02015 PF01814 Hemerythrin HHE cation binding domain CF59_RS02015 PF04405 Domain of Unknown function (DUF542) CF59_RS02020 PF00892 EamA-like transporter family CF59_RS02025 PF05368 NmrA-like family CF59_RS02030 PF01638 HxlR-like helix-turn-helix CF59_RS02035 PF02872 5'-nucleotidase, C-terminal domain CF59_RS02035 PF00149 Calcineurin-like phosphoesterase CF59_RS02040 PF00459 Inositol monophosphatase family CF59_RS02050 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CF59_RS02055 PF06526 Protein of unknown function (DUF1107) CF59_RS02060 PF01595 Cyclin M transmembrane N-terminal domain CF59_RS02060 PF03471 Transporter associated domain CF59_RS02060 PF00571 CBS domain CF59_RS02065 PF01625 Peptide methionine sulfoxide reductase CF59_RS02075 PF01103 Surface antigen CF59_RS02075 PF07244 Surface antigen variable number repeat CF59_RS02075 PF17243 POTRA domain TamA domain 1 CF59_RS02080 PF04357 TamB, inner membrane protein subunit of TAM complex CF59_RS02085 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like CF59_RS02090 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CF59_RS02095 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CF59_RS02100 PF00719 Inorganic pyrophosphatase CF59_RS02105 PF13407 Periplasmic binding protein domain CF59_RS02110 PF00005 ABC transporter CF59_RS02115 PF02653 Branched-chain amino acid transport system / permease component CF59_RS02120 PF02653 Branched-chain amino acid transport system / permease component CF59_RS02125 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CF59_RS02130 PF01225 Mur ligase family, catalytic domain CF59_RS02130 PF02875 Mur ligase family, glutamate ligase domain CF59_RS02130 PF08245 Mur ligase middle domain CF59_RS02135 PF04751 Protein of unknown function (DUF615) CF59_RS02140 PF01523 Putative modulator of DNA gyrase CF59_RS02145 PF07361 Cytochrome b562 CF59_RS02150 PF04221 RelB antitoxin CF59_RS02155 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CF59_RS02170 PF03477 ATP cone domain CF59_RS02170 PF13597 Anaerobic ribonucleoside-triphosphate reductase CF59_RS02175 PF11941 Domain of unknown function (DUF3459) CF59_RS02175 PF00128 Alpha amylase, catalytic domain CF59_RS02180 PF00367 phosphotransferase system, EIIB CF59_RS02180 PF02378 Phosphotransferase system, EIIC CF59_RS02185 PF00356 Bacterial regulatory proteins, lacI family CF59_RS02190 PF00689 Cation transporting ATPase, C-terminus CF59_RS02190 PF00690 Cation transporter/ATPase, N-terminus CF59_RS02195 PF01042 Endoribonuclease L-PSP CF59_RS02200 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CF59_RS02200 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CF59_RS02205 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CF59_RS02205 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CF59_RS02210 PF08052 PyrBI operon leader peptide CF59_RS02220 PF01042 Endoribonuclease L-PSP CF59_RS02230 PF00440 Bacterial regulatory proteins, tetR family CF59_RS02235 PF04074 YhcH/YjgK/YiaL CF59_RS02245 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CF59_RS02245 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CF59_RS02250 PF06877 Regulator of ribonuclease activity B CF59_RS02255 PF00583 Acetyltransferase (GNAT) family CF59_RS02260 PF05987 Bacterial protein of unknown function (DUF898) CF59_RS02265 PF10458 Valyl tRNA synthetase tRNA binding arm CF59_RS02265 PF00133 tRNA synthetases class I (I, L, M and V) CF59_RS02265 PF08264 Anticodon-binding domain of tRNA CF59_RS02270 PF04364 DNA polymerase III chi subunit, HolC CF59_RS02275 PF00883 Cytosol aminopeptidase family, catalytic domain CF59_RS02275 PF02789 Cytosol aminopeptidase family, N-terminal domain CF59_RS02280 PF03739 Lipopolysaccharide export system permease LptF/LptG CF59_RS02285 PF03739 Lipopolysaccharide export system permease LptF/LptG CF59_RS02290 PF05872 Bacterial protein of unknown function (DUF853) CF59_RS02295 PF08240 Alcohol dehydrogenase GroES-like domain CF59_RS02295 PF00107 Zinc-binding dehydrogenase CF59_RS02305 PF13356 Arm DNA-binding domain CF59_RS02305 PF00589 Phage integrase family CF59_RS02310 PF13276 HTH-like domain CF59_RS02310 PF13683 Integrase core domain CF59_RS02315 PF01527 Transposase CF59_RS02370 PF12419 SNF2 Helicase protein CF59_RS02370 PF00271 Helicase conserved C-terminal domain CF59_RS02370 PF00176 SNF2 family N-terminal domain CF59_RS02405 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase CF59_RS02415 PF06178 Oligogalacturonate-specific porin protein (KdgM) CF59_RS02430 PF00589 Phage integrase family CF59_RS02435 PF00589 Phage integrase family CF59_RS02445 PF00419 Fimbrial protein CF59_RS02450 PF00419 Fimbrial protein CF59_RS02455 PF02753 Pili assembly chaperone PapD, C-terminal domain CF59_RS02455 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF59_RS02460 PF00577 Outer membrane usher protein CF59_RS02460 PF13953 PapC C-terminal domain CF59_RS02460 PF13954 PapC N-terminal domain CF59_RS02465 PF00419 Fimbrial protein CF59_RS02475 PF09160 FimH, mannose binding CF59_RS02475 PF00419 Fimbrial protein CF59_RS02480 PF02447 GntP family permease CF59_RS02490 PF03786 D-mannonate dehydratase (UxuA) CF59_RS02495 PF08125 Mannitol dehydrogenase C-terminal domain CF59_RS02495 PF01232 Mannitol dehydrogenase Rossmann domain CF59_RS02505 PF07729 FCD domain CF59_RS02505 PF00392 Bacterial regulatory proteins, gntR family CF59_RS02510 PF10887 Protein of unknown function (DUF2686) CF59_RS02525 PF04965 Gene 25-like lysozyme CF59_RS02530 PF03466 LysR substrate binding domain CF59_RS02530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS02535 PF01979 Amidohydrolase family CF59_RS02540 PF07670 Nucleoside recognition CF59_RS02545 PF07670 Nucleoside recognition CF59_RS02550 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family CF59_RS02555 PF02369 Bacterial Ig-like domain (group 1) CF59_RS02555 PF11924 Inverse autotransporter, beta-domain CF59_RS02555 PF09134 Invasin, domain 3 CF59_RS02560 PF06779 Uncharacterised MFS-type transporter YbfB CF59_RS02565 PF06977 SdiA-regulated CF59_RS02575 PF11823 Protein of unknown function (DUF3343) CF59_RS02580 PF01869 BadF/BadG/BcrA/BcrD ATPase family CF59_RS02585 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CF59_RS02590 PF04286 Protein of unknown function (DUF445) CF59_RS02595 PF07690 Major Facilitator Superfamily CF59_RS02600 PF04754 Putative transposase, YhgA-like CF59_RS02605 PF00392 Bacterial regulatory proteins, gntR family CF59_RS02605 PF00155 Aminotransferase class I and II CF59_RS02610 PF06568 Domain of unknown function (DUF1127) CF59_RS02620 PF08845 Toxin SymE, type I toxin-antitoxin system CF59_RS02625 PF01420 Type I restriction modification DNA specificity domain CF59_RS02630 PF12161 HsdM N-terminal domain CF59_RS02630 PF02384 N-6 DNA Methylase CF59_RS02635 PF04851 Type III restriction enzyme, res subunit CF59_RS02635 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CF59_RS02635 PF00271 Helicase conserved C-terminal domain CF59_RS02635 PF08463 EcoEI R protein C-terminal CF59_RS02650 PF02492 CobW/HypB/UreG, nucleotide-binding domain CF59_RS02650 PF07683 Cobalamin synthesis protein cobW C-terminal domain CF59_RS02655 PF04328 Selenoprotein, putative CF59_RS02660 PF13722 5TM C-terminal transporter carbon starvation CstA CF59_RS02660 PF02554 Carbon starvation protein CstA CF59_RS02670 PF01613 Flavin reductase like domain CF59_RS02675 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CF59_RS02675 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CF59_RS02680 PF12706 Beta-lactamase superfamily domain CF59_RS02685 PF12833 Helix-turn-helix domain CF59_RS02690 PF07690 Major Facilitator Superfamily CF59_RS02695 PF03328 HpcH/HpaI aldolase/citrate lyase family CF59_RS02700 PF01557 Fumarylacetoacetate (FAA) hydrolase family CF59_RS02705 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase CF59_RS02710 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CF59_RS02715 PF00171 Aldehyde dehydrogenase family CF59_RS02720 PF01557 Fumarylacetoacetate (FAA) hydrolase family CF59_RS02725 PF01047 MarR family CF59_RS02730 PF00672 HAMP domain CF59_RS02730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CF59_RS02730 PF02203 Tar ligand binding domain homologue CF59_RS02735 PF07690 Major Facilitator Superfamily CF59_RS02740 PF00392 Bacterial regulatory proteins, gntR family CF59_RS02740 PF07729 FCD domain CF59_RS02745 PF00107 Zinc-binding dehydrogenase CF59_RS02745 PF08240 Alcohol dehydrogenase GroES-like domain CF59_RS02750 PF00884 Sulfatase CF59_RS02755 PF10696 Protein of unknown function (DUF2501) CF59_RS02760 PF01695 IstB-like ATP binding protein CF59_RS02765 PF17948 DnaT DNA-binding domain CF59_RS02770 PF12821 Threonine/Serine exporter, ThrE CF59_RS02775 PF06738 Putative threonine/serine exporter CF59_RS02780 PF00196 Bacterial regulatory proteins, luxR family CF59_RS02785 PF00196 Bacterial regulatory proteins, luxR family CF59_RS02790 PF06276 Ferric iron reductase FhuF-like transporter CF59_RS02790 PF11575 FhuF 2Fe-2S C-terminal domain CF59_RS02795 PF07256 Protein of unknown function (DUF1435) CF59_RS02820 PF08468 Methyltransferase small domain N-terminal CF59_RS02820 PF05175 Methyltransferase small domain CF59_RS02825 PF03603 DNA polymerase III psi subunit CF59_RS02830 PF00583 Acetyltransferase (GNAT) family CF59_RS02835 PF13419 Haloacid dehalogenase-like hydrolase CF59_RS02840 PF00009 Elongation factor Tu GTP binding domain CF59_RS02840 PF03144 Elongation factor Tu domain 2 CF59_RS02840 PF16658 Class II release factor RF3, C-terminal domain CF59_RS02845 PF04972 BON domain CF59_RS02850 PF07043 Protein of unknown function (DUF1328) CF59_RS02855 PF01734 Patatin-like phospholipase CF59_RS02860 PF01026 TatD related DNase CF59_RS02865 PF04055 Radical SAM superfamily CF59_RS02870 PF11230 Protein of unknown function (DUF3029) CF59_RS02880 PF01791 DeoC/LacD family aldolase CF59_RS02885 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CF59_RS02885 PF02885 Glycosyl transferase family, helical bundle domain CF59_RS02885 PF00591 Glycosyl transferase family, a/b domain CF59_RS02890 PF01676 Metalloenzyme superfamily CF59_RS02895 PF01048 Phosphorylase superfamily CF59_RS02905 PF10437 Bacterial lipoate protein ligase C-terminus CF59_RS02905 PF03099 Biotin/lipoate A/B protein ligase family CF59_RS02910 PF10144 Bacterial virulence factor haemolysin CF59_RS02915 PF18429 Domain of unknown function (DUF5609) CF59_RS02920 PF18073 Rubredoxin metal binding domain CF59_RS02925 PF13521 AAA domain CF59_RS02925 PF01381 Helix-turn-helix CF59_RS02960 PF00106 short chain dehydrogenase CF59_RS02965 PF00248 Aldo/keto reductase family CF59_RS02970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS02970 PF03466 LysR substrate binding domain CF59_RS02975 PF00005 ABC transporter CF59_RS02975 PF12848 ABC transporter CF59_RS02980 PF14718 Soluble lytic murein transglycosylase L domain CF59_RS02980 PF01464 Transglycosylase SLT domain CF59_RS02985 PF01371 Trp repressor protein CF59_RS02990 PF01931 Protein of unknown function DUF84 CF59_RS02995 PF00300 Histidine phosphatase superfamily (branch 1) CF59_RS03000 PF06445 GyrI-like small molecule binding domain CF59_RS03000 PF12833 Helix-turn-helix domain CF59_RS03005 PF05981 CreA protein CF59_RS03010 PF00486 Transcriptional regulatory protein, C terminal CF59_RS03010 PF00072 Response regulator receiver domain CF59_RS03020 PF06123 Inner membrane protein CreD CF59_RS03025 PF00072 Response regulator receiver domain CF59_RS03025 PF00486 Transcriptional regulatory protein, C terminal CF59_RS03035 PF00588 SpoU rRNA Methylase family CF59_RS03040 PF08254 Threonine leader peptide CF59_RS03045 PF00696 Amino acid kinase family CF59_RS03045 PF01842 ACT domain CF59_RS03045 PF13840 ACT domain CF59_RS03045 PF00742 Homoserine dehydrogenase CF59_RS03045 PF03447 Homoserine dehydrogenase, NAD binding domain CF59_RS03050 PF08544 GHMP kinases C terminal CF59_RS03050 PF00288 GHMP kinases N terminal domain CF59_RS03055 PF00291 Pyridoxal-phosphate dependent enzyme CF59_RS03055 PF14821 Threonine synthase N terminus CF59_RS03065 PF10697 Protein of unknown function (DUF2502) CF59_RS03070 PF03883 Peroxide stress protein YaaA CF59_RS03075 PF01235 Sodium:alanine symporter family CF59_RS03080 PF00923 Transaldolase/Fructose-6-phosphate aldolase CF59_RS03085 PF00994 Probable molybdopterin binding domain CF59_RS03090 PF01184 GPR1/FUN34/yaaH family CF59_RS03095 PF13099 Domain of unknown function (DUF3944) CF59_RS03095 PF03981 Ubiquinol-cytochrome C chaperone CF59_RS03100 PF10807 Protein of unknown function (DUF2541) CF59_RS03105 PF00012 Hsp70 protein CF59_RS03110 PF00684 DnaJ central domain CF59_RS03110 PF01556 DnaJ C terminal domain CF59_RS03110 PF00226 DnaJ domain CF59_RS03115 PF01848 Hok/gef family CF59_RS03125 PF00884 Sulfatase CF59_RS03125 PF16385 Domain of unknown function CF59_RS03135 PF06965 Na+/H+ antiporter 1 CF59_RS03140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS03140 PF03466 LysR substrate binding domain CF59_RS03150 PF00577 Outer membrane usher protein CF59_RS03150 PF13954 PapC N-terminal domain CF59_RS03150 PF13953 PapC C-terminal domain CF59_RS03155 PF02753 Pili assembly chaperone PapD, C-terminal domain CF59_RS03155 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF59_RS03170 PF01649 Ribosomal protein S20 CF59_RS03175 PF10837 Protein of unknown function (DUF2575) CF59_RS03180 PF06574 FAD synthetase CF59_RS03180 PF01687 Riboflavin kinase CF59_RS03185 PF00133 tRNA synthetases class I (I, L, M and V) CF59_RS03185 PF06827 Zinc finger found in FPG and IleRS CF59_RS03185 PF08264 Anticodon-binding domain of tRNA CF59_RS03190 PF01252 Signal peptidase (SPase) II CF59_RS03195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CF59_RS03200 PF02401 LytB protein CF59_RS03205 PF01156 Inosine-uridine preferring nucleoside hydrolase CF59_RS03210 PF01113 Dihydrodipicolinate reductase, N-terminus CF59_RS03210 PF05173 Dihydrodipicolinate reductase, C-terminus CF59_RS03225 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CF59_RS03225 PF00117 Glutamine amidotransferase class-I CF59_RS03230 PF02142 MGS-like domain CF59_RS03230 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CF59_RS03230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CF59_RS03240 PF07180 CaiF/GrlA transcriptional regulator CF59_RS03245 PF00132 Bacterial transferase hexapeptide (six repeats) CF59_RS03250 PF00378 Enoyl-CoA hydratase/isomerase CF59_RS03255 PF00501 AMP-binding enzyme CF59_RS03255 PF13193 AMP-binding enzyme C-terminal domain CF59_RS03260 PF02515 CoA-transferase family III CF59_RS03265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CF59_RS03265 PF02770 Acyl-CoA dehydrogenase, middle domain CF59_RS03265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CF59_RS03270 PF02028 BCCT, betaine/carnitine/choline family transporter CF59_RS03275 PF01012 Electron transfer flavoprotein domain CF59_RS03280 PF01012 Electron transfer flavoprotein domain CF59_RS03280 PF00766 Electron transfer flavoprotein FAD-binding domain CF59_RS03285 PF01494 FAD binding domain CF59_RS03295 PF00083 Sugar (and other) transporter CF59_RS03300 PF02525 Flavodoxin-like fold CF59_RS03305 PF02254 TrkA-N domain CF59_RS03305 PF00999 Sodium/hydrogen exchanger family CF59_RS03310 PF00186 Dihydrofolate reductase CF59_RS03315 PF00149 Calcineurin-like phosphoesterase CF59_RS03320 PF04379 ApaG domain CF59_RS03325 PF00398 Ribosomal RNA adenine dimethylase CF59_RS03330 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CF59_RS03335 PF09312 SurA N-terminal domain CF59_RS03335 PF00639 PPIC-type PPIASE domain CF59_RS03340 PF04453 LPS transport system D CF59_RS03340 PF03968 OstA-like protein CF59_RS03345 PF00226 DnaJ domain CF59_RS03345 PF05099 Tellurite resistance protein TerB CF59_RS03355 PF00849 RNA pseudouridylate synthase CF59_RS03360 PF12137 RNA polymerase recycling family C-terminal CF59_RS03360 PF00176 SNF2 family N-terminal domain CF59_RS03360 PF18339 RapA N-terminal Tudor like domain 1 CF59_RS03360 PF18337 RapA N-terminal Tudor like domain CF59_RS03360 PF00271 Helicase conserved C-terminal domain CF59_RS03365 PF00136 DNA polymerase family B CF59_RS03365 PF03104 DNA polymerase family B, exonuclease domain CF59_RS03370 PF00596 Class II Aldolase and Adducin N-terminal domain CF59_RS03375 PF02610 L-arabinose isomerase CF59_RS03375 PF11762 L-arabinose isomerase C-terminal domain CF59_RS03380 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CF59_RS03385 PF12833 Helix-turn-helix domain CF59_RS03385 PF02311 AraC-like ligand binding domain CF59_RS03390 PF09335 SNARE associated Golgi protein CF59_RS03395 PF00005 ABC transporter CF59_RS03400 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS03415 PF12793 Sugar transport-related sRNA regulator N-term CF59_RS03415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF59_RS03425 PF00694 Aconitase C-terminal domain CF59_RS03430 PF00330 Aconitase family (aconitate hydratase) CF59_RS03435 PF00180 Isocitrate/isopropylmalate dehydrogenase CF59_RS03440 PF08502 LeuA allosteric (dimerisation) domain CF59_RS03440 PF00682 HMGL-like CF59_RS03445 PF08054 Leucine operon leader peptide CF59_RS03450 PF03466 LysR substrate binding domain CF59_RS03450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS03455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CF59_RS03455 PF00205 Thiamine pyrophosphate enzyme, central domain CF59_RS03455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CF59_RS03460 PF10369 Small subunit of acetolactate synthase CF59_RS03470 PF00356 Bacterial regulatory proteins, lacI family CF59_RS03470 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CF59_RS03475 PF02381 MraZ protein, putative antitoxin-like CF59_RS03480 PF01795 MraW methylase family CF59_RS03485 PF04999 Cell division protein FtsL CF59_RS03490 PF03717 Penicillin-binding Protein dimerisation domain CF59_RS03490 PF00905 Penicillin binding protein transpeptidase domain CF59_RS03495 PF02875 Mur ligase family, glutamate ligase domain CF59_RS03495 PF08245 Mur ligase middle domain CF59_RS03495 PF01225 Mur ligase family, catalytic domain CF59_RS03500 PF08245 Mur ligase middle domain CF59_RS03500 PF01225 Mur ligase family, catalytic domain CF59_RS03500 PF02875 Mur ligase family, glutamate ligase domain CF59_RS03505 PF00953 Glycosyl transferase family 4 CF59_RS03505 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CF59_RS03510 PF02875 Mur ligase family, glutamate ligase domain CF59_RS03510 PF08245 Mur ligase middle domain CF59_RS03515 PF01098 Cell cycle protein CF59_RS03520 PF03033 Glycosyltransferase family 28 N-terminal domain CF59_RS03520 PF04101 Glycosyltransferase family 28 C-terminal domain CF59_RS03525 PF02875 Mur ligase family, glutamate ligase domain CF59_RS03525 PF08245 Mur ligase middle domain CF59_RS03525 PF01225 Mur ligase family, catalytic domain CF59_RS03530 PF01820 D-ala D-ala ligase N-terminus CF59_RS03530 PF07478 D-ala D-ala ligase C-terminus CF59_RS03535 PF08478 POTRA domain, FtsQ-type CF59_RS03535 PF03799 Cell division protein FtsQ CF59_RS03540 PF02491 SHS2 domain inserted in FTSA CF59_RS03545 PF12327 FtsZ family, C-terminal domain CF59_RS03545 PF00091 Tubulin/FtsZ family, GTPase domain CF59_RS03550 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CF59_RS03555 PF06558 Secretion monitor precursor protein (SecM) CF59_RS03560 PF07516 SecA Wing and Scaffold domain CF59_RS03560 PF02810 SEC-C motif CF59_RS03560 PF01043 SecA preprotein cross-linking domain CF59_RS03560 PF07517 SecA DEAD-like domain CF59_RS03565 PF00293 NUDIX domain CF59_RS03575 PF03884 DNA gyrase inhibitor YacG CF59_RS03580 PF07072 Cell division protein CF59_RS03585 PF01121 Dephospho-CoA kinase CF59_RS03590 PF00478 IMP dehydrogenase / GMP reductase domain CF59_RS03595 PF00482 Type II secretion system (T2SS), protein F CF59_RS03600 PF00437 Type II/IV secretion system protein CF59_RS03600 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CF59_RS03605 PF07963 Prokaryotic N-terminal methylation motif CF59_RS03615 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CF59_RS03615 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CF59_RS03620 PF01510 N-acetylmuramoyl-L-alanine amidase CF59_RS03625 PF17113 Regulatory signalling modulator protein AmpE CF59_RS03630 PF00324 Amino acid permease CF59_RS03635 PF00392 Bacterial regulatory proteins, gntR family CF59_RS03635 PF07729 FCD domain CF59_RS03640 PF17831 Pyruvate dehydrogenase E1 component middle domain CF59_RS03640 PF00456 Transketolase, thiamine diphosphate binding domain CF59_RS03645 PF00364 Biotin-requiring enzyme CF59_RS03645 PF02817 e3 binding domain CF59_RS03645 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CF59_RS03650 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF59_RS03650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CF59_RS03655 PF11737 Protein of unknown function (DUF3300) CF59_RS03660 PF06434 Aconitate hydratase 2 N-terminus CF59_RS03660 PF00330 Aconitase family (aconitate hydratase) CF59_RS03660 PF11791 Aconitate B N-terminal domain CF59_RS03665 PF06062 Uncharacterised protein family (UPF0231) CF59_RS03670 PF02675 S-adenosylmethionine decarboxylase CF59_RS03675 PF17284 Spermidine synthase tetramerisation domain CF59_RS03680 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) CF59_RS03685 PF07732 Multicopper oxidase CF59_RS03685 PF07731 Multicopper oxidase CF59_RS03685 PF00394 Multicopper oxidase CF59_RS03690 PF01011 PQQ enzyme repeat CF59_RS03695 PF00156 Phosphoribosyl transferase domain CF59_RS03700 PF00484 Carbonic anhydrase CF59_RS03705 PF00005 ABC transporter CF59_RS03710 PF01061 ABC-2 type transporter CF59_RS03715 PF03610 PTS system fructose IIA component CF59_RS03720 PF01522 Polysaccharide deacetylase CF59_RS03725 PF02261 Aspartate decarboxylase CF59_RS03730 PF04754 Putative transposase, YhgA-like CF59_RS03740 PF02569 Pantoate-beta-alanine ligase CF59_RS03745 PF02548 Ketopantoate hydroxymethyltransferase CF59_RS03750 PF00419 Fimbrial protein CF59_RS03755 PF00419 Fimbrial protein CF59_RS03760 PF00419 Fimbrial protein CF59_RS03765 PF00577 Outer membrane usher protein CF59_RS03765 PF13954 PapC N-terminal domain CF59_RS03765 PF13953 PapC C-terminal domain CF59_RS03770 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF59_RS03770 PF02753 Pili assembly chaperone PapD, C-terminal domain CF59_RS03775 PF00419 Fimbrial protein CF59_RS03780 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CF59_RS03785 PF01743 Poly A polymerase head domain CF59_RS03785 PF12626 Polymerase A arginine-rich C-terminus CF59_RS03785 PF12627 Probable RNA and SrmB- binding site of polymerase A CF59_RS03790 PF00749 tRNA synthetases class I (E and Q), catalytic domain CF59_RS03795 PF01258 Prokaryotic dksA/traR C4-type zinc finger CF59_RS03800 PF03749 Sugar fermentation stimulation protein RE domain CF59_RS03800 PF17746 SfsA N-terminal OB domain CF59_RS03805 PF02834 LigT like Phosphoesterase CF59_RS03810 PF00271 Helicase conserved C-terminal domain CF59_RS03810 PF04408 Helicase associated domain (HA2) CF59_RS03810 PF00270 DEAD/DEAH box helicase CF59_RS03810 PF08482 ATP-dependent helicase C-terminal CF59_RS03815 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal CF59_RS03815 PF00912 Transglycosylase CF59_RS03815 PF14814 Bifunctional transglycosylase second domain CF59_RS03815 PF00905 Penicillin binding protein transpeptidase domain CF59_RS03820 PF00593 TonB dependent receptor CF59_RS03820 PF07715 TonB-dependent Receptor Plug Domain CF59_RS03825 PF00005 ABC transporter CF59_RS03830 PF01497 Periplasmic binding protein CF59_RS03835 PF01032 FecCD transport family CF59_RS03840 PF00202 Aminotransferase class-III CF59_RS03845 PF00654 Voltage gated chloride channel CF59_RS03855 PF03458 UPF0126 domain CF59_RS03860 PF01497 Periplasmic binding protein CF59_RS03865 PF01048 Phosphorylase superfamily CF59_RS03870 PF01966 HD domain CF59_RS03875 PF00595 PDZ domain CF59_RS03880 PF05651 Putative sugar diacid recognition CF59_RS03880 PF13556 PucR C-terminal helix-turn-helix domain CF59_RS03880 PF17853 GGDEF-like domain CF59_RS03885 PF11944 Protein of unknown function (DUF3461) CF59_RS03890 PF14602 Hexapeptide repeat of succinyl-transferase CF59_RS03890 PF00132 Bacterial transferase hexapeptide (six repeats) CF59_RS03890 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CF59_RS03895 PF01909 Nucleotidyltransferase domain CF59_RS03895 PF01966 HD domain CF59_RS03895 PF08335 GlnD PII-uridylyltransferase CF59_RS03895 PF01842 ACT domain CF59_RS03900 PF00557 Metallopeptidase family M24 CF59_RS03905 PF00318 Ribosomal protein S2 CF59_RS03910 PF00889 Elongation factor TS CF59_RS03915 PF00696 Amino acid kinase family CF59_RS03920 PF01765 Ribosome recycling factor CF59_RS03925 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CF59_RS03925 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CF59_RS03925 PF13288 DXP reductoisomerase C-terminal domain CF59_RS03930 PF01255 Putative undecaprenyl diphosphate synthase CF59_RS03940 PF02163 Peptidase family M50 CF59_RS03940 PF17820 PDZ domain CF59_RS03945 PF01103 Surface antigen CF59_RS03945 PF07244 Surface antigen variable number repeat CF59_RS03950 PF03938 Outer membrane protein (OmpH-like) CF59_RS03955 PF00132 Bacterial transferase hexapeptide (six repeats) CF59_RS03955 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CF59_RS03960 PF07977 FabA-like domain CF59_RS03965 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CF59_RS03965 PF00132 Bacterial transferase hexapeptide (six repeats) CF59_RS03970 PF02684 Lipid-A-disaccharide synthetase CF59_RS03975 PF01351 Ribonuclease HII CF59_RS03980 PF01336 OB-fold nucleic acid binding domain CF59_RS03980 PF02811 PHP domain CF59_RS03980 PF14579 Helix-hairpin-helix motif CF59_RS03980 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CF59_RS03980 PF07733 Bacterial DNA polymerase III alpha NTPase domain CF59_RS03985 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CF59_RS03990 PF01276 Orn/Lys/Arg decarboxylase, major domain CF59_RS03990 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CF59_RS03990 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CF59_RS03995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CF59_RS04000 PF01171 PP-loop family CF59_RS04000 PF11734 TilS substrate C-terminal domain CF59_RS04000 PF09179 TilS substrate binding domain CF59_RS04005 PF07073 Modulator of Rho-dependent transcription termination (ROF) CF59_RS04010 PF06786 Uncharacterised protein family (UPF0253) CF59_RS04015 PF07152 YaeQ protein CF59_RS04020 PF00472 RF-1 domain CF59_RS04025 PF04170 NlpE N-terminal domain CF59_RS04025 PF17185 NlpE C-terminal OB domain CF59_RS04030 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CF59_RS04035 PF04073 Aminoacyl-tRNA editing domain CF59_RS04035 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CF59_RS04035 PF03129 Anticodon binding domain CF59_RS04040 PF18389 TrmO C-terminal domain CF59_RS04040 PF01980 tRNA-methyltransferase O CF59_RS04045 PF16358 RcsF lipoprotein CF59_RS04050 PF03180 NLPA lipoprotein CF59_RS04055 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS04060 PF09383 NIL domain CF59_RS04060 PF00005 ABC transporter CF59_RS04100 PF00248 Aldo/keto reductase family CF59_RS04105 PF03466 LysR substrate binding domain CF59_RS04105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS04110 PF03372 Endonuclease/Exonuclease/phosphatase family CF59_RS04115 PF08241 Methyltransferase domain CF59_RS04120 PF01464 Transglycosylase SLT domain CF59_RS04120 PF01476 LysM domain CF59_RS04125 PF16123 Hydroxyacylglutathione hydrolase C-terminus CF59_RS04125 PF00753 Metallo-beta-lactamase superfamily CF59_RS04130 PF08241 Methyltransferase domain CF59_RS04135 PF00075 RNase H CF59_RS04140 PF00929 Exonuclease CF59_RS04165 PF05638 Type VI secretion system effector, Hcp CF59_RS04190 PF07724 AAA domain (Cdc48 subfamily) CF59_RS04190 PF10431 C-terminal, D2-small domain, of ClpB protein CF59_RS04190 PF17871 AAA lid domain CF59_RS04190 PF00004 ATPase family associated with various cellular activities (AAA) CF59_RS04200 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CF59_RS04220 PF05947 Type VI secretion system, TssF CF59_RS04230 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CF59_RS04260 PF04717 Type VI secretion system, phage-baseplate injector CF59_RS04265 PF05593 RHS Repeat CF59_RS04265 PF03527 RHS protein CF59_RS04265 PF14220 Domain of unknown function (DUF4329) CF59_RS04275 PF13808 DDE_Tnp_1-associated CF59_RS04275 PF01609 Transposase DDE domain CF59_RS04280 PF00872 Transposase, Mutator family CF59_RS04285 PF00795 Carbon-nitrogen hydrolase CF59_RS04295 PF02770 Acyl-CoA dehydrogenase, middle domain CF59_RS04295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CF59_RS04295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CF59_RS04295 PF09317 Domain of unknown function (DUF1974) CF59_RS04300 PF13580 SIS domain CF59_RS04305 PF13230 Glutamine amidotransferases class-II CF59_RS04310 PF03734 L,D-transpeptidase catalytic domain CF59_RS04315 PF00877 NlpC/P60 family CF59_RS04330 PF00771 FHIPEP family CF59_RS04335 PF13677 Membrane MotB of proton-channel complex MotA/MotB CF59_RS04335 PF00691 OmpA family CF59_RS04340 PF00817 impB/mucB/samB family CF59_RS04340 PF11799 impB/mucB/samB family C-terminal domain CF59_RS04340 PF11798 IMS family HHH motif CF59_RS04350 PF13957 Toxin YafO, type II toxin-antitoxin system CF59_RS04355 PF13673 Acetyltransferase (GNAT) domain CF59_RS04360 PF00472 RF-1 domain CF59_RS04365 PF07687 Peptidase dimerisation domain CF59_RS04365 PF01546 Peptidase family M20/M25/M40 CF59_RS04370 PF00156 Phosphoribosyl transferase domain CF59_RS04375 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) CF59_RS04380 PF07417 Sigma factor-binding transcriptional regulator Crl CF59_RS04385 PF00267 Gram-negative porin CF59_RS04390 PF00696 Amino acid kinase family CF59_RS04390 PF01472 PUA domain CF59_RS04395 PF00171 Aldehyde dehydrogenase family CF59_RS04405 PF00589 Phage integrase family CF59_RS04410 PF13693 Winged helix-turn-helix DNA-binding CF59_RS04435 PF03466 LysR substrate binding domain CF59_RS04435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS04440 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CF59_RS04445 PF07690 Major Facilitator Superfamily CF59_RS04450 PF02625 XdhC and CoxI family CF59_RS04450 PF13478 XdhC Rossmann domain CF59_RS04455 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CF59_RS04455 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CF59_RS04460 PF03450 CO dehydrogenase flavoprotein C-terminal domain CF59_RS04460 PF00941 FAD binding domain in molybdopterin dehydrogenase CF59_RS04465 PF10518 TAT (twin-arginine translocation) pathway signal sequence CF59_RS04465 PF00111 2Fe-2S iron-sulfur cluster binding domain CF59_RS04465 PF01799 [2Fe-2S] binding domain CF59_RS04470 PF07274 Protein of unknown function (DUF1440) CF59_RS04475 PF03692 Putative zinc- or iron-chelating domain CF59_RS04490 PF15976 CS1-pili formation C-terminal CF59_RS04490 PF16967 E-set like domain CF59_RS04495 PF18649 EcpB C-terminal domain CF59_RS04500 PF16449 Fimbrillin MatB CF59_RS04505 PF00196 Bacterial regulatory proteins, luxR family CF59_RS04510 PF00444 Ribosomal protein L36 CF59_RS04515 PF01197 Ribosomal protein L31 CF59_RS04525 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CF59_RS04530 PF12146 Serine aminopeptidase, S33 CF59_RS04535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS04535 PF03466 LysR substrate binding domain CF59_RS04540 PF03466 LysR substrate binding domain CF59_RS04540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS04545 PF00248 Aldo/keto reductase family CF59_RS04550 PF00248 Aldo/keto reductase family CF59_RS04555 PF11924 Inverse autotransporter, beta-domain CF59_RS04560 PF12833 Helix-turn-helix domain CF59_RS04565 PF00248 Aldo/keto reductase family CF59_RS04570 PF04224 Protein of unknown function, DUF417 CF59_RS04575 PF07338 Protein of unknown function (DUF1471) CF59_RS04580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CF59_RS04580 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF59_RS04585 PF12852 Cupin CF59_RS04585 PF12833 Helix-turn-helix domain CF59_RS04590 PF02754 Cysteine-rich domain CF59_RS04595 PF13183 4Fe-4S dicluster domain CF59_RS04595 PF02589 LUD domain CF59_RS04595 PF11870 Domain of unknown function (DUF3390) CF59_RS04600 PF02589 LUD domain CF59_RS04615 PF05199 GMC oxidoreductase CF59_RS04615 PF00732 GMC oxidoreductase CF59_RS04620 PF00171 Aldehyde dehydrogenase family CF59_RS04625 PF00440 Bacterial regulatory proteins, tetR family CF59_RS04625 PF13977 BetI-type transcriptional repressor, C-terminal CF59_RS04630 PF02028 BCCT, betaine/carnitine/choline family transporter CF59_RS04640 PF00563 EAL domain CF59_RS04640 PF00196 Bacterial regulatory proteins, luxR family CF59_RS04645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS04645 PF03466 LysR substrate binding domain CF59_RS04650 PF06496 Protein of unknown function (DUF1097) CF59_RS04655 PF12796 Ankyrin repeats (3 copies) CF59_RS04660 PF11392 Protein of unknown function (DUF2877) CF59_RS04665 PF00549 CoA-ligase CF59_RS04665 PF02629 CoA binding domain CF59_RS04670 PF06545 Protein of unknown function (DUF1116) CF59_RS04675 PF00696 Amino acid kinase family CF59_RS04680 PF07969 Amidohydrolase family CF59_RS04690 PF13407 Periplasmic binding protein domain CF59_RS04695 PF00005 ABC transporter CF59_RS04700 PF02653 Branched-chain amino acid transport system / permease component CF59_RS04705 PF02653 Branched-chain amino acid transport system / permease component CF59_RS04710 PF08240 Alcohol dehydrogenase GroES-like domain CF59_RS04710 PF00107 Zinc-binding dehydrogenase CF59_RS04725 PF01810 LysE type translocator CF59_RS04730 PF07338 Protein of unknown function (DUF1471) CF59_RS04735 PF06506 Propionate catabolism activator CF59_RS04735 PF02954 Bacterial regulatory protein, Fis family CF59_RS04735 PF00158 Sigma-54 interaction domain CF59_RS04745 PF00285 Citrate synthase, C-terminal domain CF59_RS04750 PF03972 MmgE/PrpD family CF59_RS04755 PF16177 Acetyl-coenzyme A synthetase N-terminus CF59_RS04755 PF00501 AMP-binding enzyme CF59_RS04755 PF13193 AMP-binding enzyme C-terminal domain CF59_RS04760 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CF59_RS04765 PF07969 Amidohydrolase family CF59_RS04770 PF03466 LysR substrate binding domain CF59_RS04770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS04775 PF00484 Carbonic anhydrase CF59_RS04780 PF02560 Cyanate lyase C-terminal domain CF59_RS04785 PF07690 Major Facilitator Superfamily CF59_RS04790 PF00132 Bacterial transferase hexapeptide (six repeats) CF59_RS04790 PF12464 Maltose acetyltransferase CF59_RS04795 PF01306 LacY proton/sugar symporter CF59_RS04800 PF02837 Glycosyl hydrolases family 2, sugar binding domain CF59_RS04800 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CF59_RS04800 PF16353 Domain of unknown function(DUF4981) CF59_RS04800 PF00703 Glycosyl hydrolases family 2 CF59_RS04800 PF02929 Beta galactosidase small chain CF59_RS04805 PF00356 Bacterial regulatory proteins, lacI family CF59_RS04810 PF09339 IclR helix-turn-helix domain CF59_RS04810 PF01614 Bacterial transcriptional regulator CF59_RS04815 PF01494 FAD binding domain CF59_RS04820 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CF59_RS04825 PF12697 Alpha/beta hydrolase family CF59_RS04830 PF01557 Fumarylacetoacetate (FAA) hydrolase family CF59_RS04835 PF01118 Semialdehyde dehydrogenase, NAD binding domain CF59_RS04835 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation CF59_RS04840 PF00682 HMGL-like CF59_RS04840 PF07836 DmpG-like communication domain CF59_RS04845 PF07690 Major Facilitator Superfamily CF59_RS04850 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CF59_RS04855 PF00756 Putative esterase CF59_RS04860 PF08240 Alcohol dehydrogenase GroES-like domain CF59_RS04860 PF00107 Zinc-binding dehydrogenase CF59_RS04865 PF02583 Metal-sensitive transcriptional repressor CF59_RS04875 PF00132 Bacterial transferase hexapeptide (six repeats) CF59_RS04880 PF00535 Glycosyl transferase family 2 CF59_RS04885 PF02585 GlcNAc-PI de-N-acetylase CF59_RS04890 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CF59_RS04895 PF00005 ABC transporter CF59_RS04900 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS04905 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CF59_RS04910 PF00490 Delta-aminolevulinic acid dehydratase CF59_RS04915 PF03212 Pertactin CF59_RS04915 PF03797 Autotransporter beta-domain CF59_RS04920 PF15977 Winged helix-turn-helix DNA binding CF59_RS04925 PF00144 Beta-lactamase CF59_RS04935 PF05992 SbmA/BacA-like family CF59_RS04940 PF07759 Protein of unknown function (DUF1615) CF59_RS04945 PF10954 Protein of unknown function (DUF2755) CF59_RS04950 PF10953 Protein of unknown function (DUF2754) CF59_RS04955 PF07478 D-ala D-ala ligase C-terminus CF59_RS04955 PF01820 D-ala D-ala ligase N-terminus CF59_RS04965 PF10796 Sigma-S stabilisation anti-adaptor protein CF59_RS04970 PF00245 Alkaline phosphatase CF59_RS04975 PF07769 psiF repeat CF59_RS04980 PF05230 MASE2 domain CF59_RS04980 PF00990 Diguanylate cyclase, GGDEF domain CF59_RS04985 PF03807 NADP oxidoreductase coenzyme F420-dependent CF59_RS04985 PF14748 Pyrroline-5-carboxylate reductase dimerisation CF59_RS04990 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CF59_RS04995 PF01202 Shikimate kinase CF59_RS05000 PF16362 YaiA protein CF59_RS05010 PF07302 AroM protein CF59_RS05015 PF06865 Pyrimidine/purine nucleoside phosphorylase CF59_RS05020 PF10971 Protein of unknown function (DUF2773) CF59_RS05025 PF04381 Putative exonuclease, RdgC CF59_RS05030 PF00480 ROK family CF59_RS05035 PF07690 Major Facilitator Superfamily CF59_RS05040 PF13476 AAA domain CF59_RS05045 PF12320 Type 5 capsule protein repressor C-terminal domain CF59_RS05045 PF00149 Calcineurin-like phosphoesterase CF59_RS05050 PF00486 Transcriptional regulatory protein, C terminal CF59_RS05050 PF00072 Response regulator receiver domain CF59_RS05055 PF11808 Phosphate regulon sensor protein PhoR CF59_RS05055 PF00989 PAS fold CF59_RS05055 PF00512 His Kinase A (phospho-acceptor) domain CF59_RS05055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS05060 PF05525 Branched-chain amino acid transport protein CF59_RS05065 PF00324 Amino acid permease CF59_RS05070 PF02903 Alpha amylase, N-terminal ig-like domain CF59_RS05070 PF00128 Alpha amylase, catalytic domain CF59_RS05080 PF04336 Acyl carrier protein phosphodiesterase CF59_RS05085 PF02547 Queuosine biosynthesis protein CF59_RS05090 PF01702 Queuine tRNA-ribosyltransferase CF59_RS05095 PF02699 Preprotein translocase subunit CF59_RS05100 PF02355 Protein export membrane protein CF59_RS05100 PF13721 SecD export protein N-terminal TM region CF59_RS05100 PF07549 SecD/SecF GG Motif CF59_RS05105 PF02355 Protein export membrane protein CF59_RS05105 PF07549 SecD/SecF GG Motif CF59_RS05110 PF01844 HNH endonuclease CF59_RS05120 PF03502 Nucleoside-specific channel-forming protein, Tsx CF59_RS05125 PF11622 Protein of unknown function (DUF3251) CF59_RS05135 PF01797 Transposase IS200 like CF59_RS05140 PF01385 Probable transposase CF59_RS05140 PF12323 Helix-turn-helix domain CF59_RS05140 PF07282 Putative transposase DNA-binding domain CF59_RS05145 PF11622 Protein of unknown function (DUF3251) CF59_RS05150 PF03477 ATP cone domain CF59_RS05155 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CF59_RS05155 PF01872 RibD C-terminal domain CF59_RS05160 PF00885 6,7-dimethyl-8-ribityllumazine synthase CF59_RS05165 PF01029 NusB family CF59_RS05170 PF00586 AIR synthase related protein, N-terminal domain CF59_RS05170 PF02769 AIR synthase related protein, C-terminal domain CF59_RS05175 PF04608 Phosphatidylglycerophosphatase A CF59_RS05185 PF00248 Aldo/keto reductase family CF59_RS05190 PF02779 Transketolase, pyrimidine binding domain CF59_RS05190 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CF59_RS05190 PF02780 Transketolase, C-terminal domain CF59_RS05195 PF00348 Polyprenyl synthetase CF59_RS05200 PF02609 Exonuclease VII small subunit CF59_RS05205 PF02926 THUMP domain CF59_RS05205 PF02568 Thiamine biosynthesis protein (ThiI) CF59_RS05210 PF01965 DJ-1/PfpI family CF59_RS05215 PF02558 Ketopantoate reductase PanE/ApbA CF59_RS05215 PF08546 Ketopantoate reductase PanE/ApbA C terminal CF59_RS05220 PF04461 Protein of unknown function (DUF520) CF59_RS05225 PF07690 Major Facilitator Superfamily CF59_RS05230 PF01040 UbiA prenyltransferase family CF59_RS05235 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CF59_RS05240 PF00510 Cytochrome c oxidase subunit III CF59_RS05245 PF00115 Cytochrome C and Quinol oxidase polypeptide I CF59_RS05250 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CF59_RS05250 PF06481 COX Aromatic Rich Motif CF59_RS05255 PF07690 Major Facilitator Superfamily CF59_RS05260 PF03923 Uncharacterized lipoprotein CF59_RS05260 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CF59_RS05265 PF01722 BolA-like protein CF59_RS05275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CF59_RS05275 PF05698 Bacterial trigger factor protein (TF) C-terminus CF59_RS05275 PF05697 Bacterial trigger factor protein (TF) CF59_RS05280 PF00574 Clp protease CF59_RS05285 PF10431 C-terminal, D2-small domain, of ClpB protein CF59_RS05285 PF06689 ClpX C4-type zinc finger CF59_RS05285 PF07724 AAA domain (Cdc48 subfamily) CF59_RS05290 PF00004 ATPase family associated with various cellular activities (AAA) CF59_RS05290 PF05362 Lon protease (S16) C-terminal proteolytic domain CF59_RS05290 PF02190 ATP-dependent protease La (LON) substrate-binding domain CF59_RS05295 PF00216 Bacterial DNA-binding protein CF59_RS05300 PF13145 PPIC-type PPIASE domain CF59_RS05315 PF06508 Queuosine biosynthesis protein QueC CF59_RS05320 PF12793 Sugar transport-related sRNA regulator N-term CF59_RS05320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF59_RS05330 PF01037 Lrp/AsnC ligand binding domain CF59_RS05330 PF13404 AsnC-type helix-turn-helix domain CF59_RS05335 PF00664 ABC transporter transmembrane region CF59_RS05335 PF00005 ABC transporter CF59_RS05340 PF00005 ABC transporter CF59_RS05340 PF00664 ABC transporter transmembrane region CF59_RS05345 PF00543 Nitrogen regulatory protein P-II CF59_RS05350 PF00909 Ammonium Transporter Family CF59_RS05360 PF09619 Type III secretion system lipoprotein chaperone (YscW) CF59_RS05365 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CF59_RS05370 PF07237 Protein of unknown function (DUF1428) CF59_RS05375 PF12792 CSS motif domain associated with EAL CF59_RS05375 PF00563 EAL domain CF59_RS05380 PF10777 Inner membrane protein YlaC CF59_RS05385 PF12464 Maltose acetyltransferase CF59_RS05385 PF14602 Hexapeptide repeat of succinyl-transferase CF59_RS05390 PF05321 Haemolysin expression modulating protein CF59_RS05395 PF10757 Biofilm formation regulator YbaJ CF59_RS05400 PF00873 AcrB/AcrD/AcrF family CF59_RS05405 PF00529 HlyD membrane-fusion protein of T1SS CF59_RS05405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF59_RS05410 PF00440 Bacterial regulatory proteins, tetR family CF59_RS05410 PF08361 MAATS-type transcriptional repressor, C-terminal region CF59_RS05415 PF12794 Mechanosensitive ion channel inner membrane domain 1 CF59_RS05415 PF12795 Mechanosensitive ion channel porin domain CF59_RS05415 PF00924 Mechanosensitive ion channel CF59_RS05420 PF10689 Protein of unknown function (DUF2496) CF59_RS05425 PF07445 Primosomal replication protein priC CF59_RS05430 PF04304 Protein of unknown function (DUF454) CF59_RS05435 PF00156 Phosphoribosyl transferase domain CF59_RS05440 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CF59_RS05440 PF12169 DNA polymerase III subunits gamma and tau domain III CF59_RS05440 PF12170 DNA polymerase III tau subunit V interacting with alpha CF59_RS05445 PF02575 YbaB/EbfC DNA-binding family CF59_RS05450 PF13662 Toprim domain CF59_RS05450 PF02132 RecR protein CF59_RS05455 PF00183 Hsp90 protein CF59_RS05455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS05460 PF05191 Adenylate kinase, active site lid CF59_RS05465 PF00762 Ferrochelatase CF59_RS05470 PF07859 alpha/beta hydrolase fold CF59_RS05475 PF00294 pfkB family carbohydrate kinase CF59_RS05480 PF00999 Sodium/hydrogen exchanger family CF59_RS05480 PF02254 TrkA-N domain CF59_RS05485 PF07690 Major Facilitator Superfamily CF59_RS05490 PF02872 5'-nucleotidase, C-terminal domain CF59_RS05490 PF00149 Calcineurin-like phosphoesterase CF59_RS05495 PF04073 Aminoacyl-tRNA editing domain CF59_RS05500 PF01963 TraB family CF59_RS05505 PF00403 Heavy-metal-associated domain CF59_RS05510 PF04960 Glutaminase CF59_RS05515 PF13520 Amino acid permease CF59_RS05535 PF00664 ABC transporter transmembrane region CF59_RS05535 PF03412 Peptidase C39 family CF59_RS05535 PF00005 ABC transporter CF59_RS05540 PF00529 HlyD membrane-fusion protein of T1SS CF59_RS05545 PF13411 MerR HTH family regulatory protein CF59_RS05570 PF01957 NfeD-like C-terminal, partner-binding CF59_RS05575 PF16200 C-terminal region of band_7 CF59_RS05575 PF01145 SPFH domain / Band 7 family CF59_RS05580 PF00005 ABC transporter CF59_RS05585 PF03649 Uncharacterised protein family (UPF0014) CF59_RS05590 PF00085 Thioredoxin CF59_RS05595 PF00106 short chain dehydrogenase CF59_RS05600 PF13472 GDSL-like Lipase/Acylhydrolase family CF59_RS05605 PF00005 ABC transporter CF59_RS05615 PF14220 Domain of unknown function (DUF4329) CF59_RS05615 PF03527 RHS protein CF59_RS05615 PF05593 RHS Repeat CF59_RS05635 PF03466 LysR substrate binding domain CF59_RS05635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS05640 PF04115 Ureidoglycolate lyase CF59_RS05645 PF01614 Bacterial transcriptional regulator CF59_RS05645 PF09339 IclR helix-turn-helix domain CF59_RS05650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CF59_RS05650 PF00205 Thiamine pyrophosphate enzyme, central domain CF59_RS05650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CF59_RS05655 PF01261 Xylose isomerase-like TIM barrel CF59_RS05660 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CF59_RS05660 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CF59_RS05665 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CF59_RS05670 PF01979 Amidohydrolase family CF59_RS05675 PF00860 Permease family CF59_RS05680 PF02595 Glycerate kinase family CF59_RS05685 PF05899 Protein of unknown function (DUF861) CF59_RS05685 PF07883 Cupin domain CF59_RS05690 PF01546 Peptidase family M20/M25/M40 CF59_RS05695 PF02615 Malate/L-lactate dehydrogenase CF59_RS05700 PF00549 CoA-ligase CF59_RS05700 PF02629 CoA binding domain CF59_RS05705 PF06545 Protein of unknown function (DUF1116) CF59_RS05710 PF11392 Protein of unknown function (DUF2877) CF59_RS05715 PF00696 Amino acid kinase family CF59_RS05720 PF02222 ATP-grasp domain CF59_RS05720 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CF59_RS05725 PF00731 AIR carboxylase CF59_RS05730 PF12850 Calcineurin-like phosphoesterase superfamily domain CF59_RS05735 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CF59_RS05740 PF09190 DALR domain CF59_RS05740 PF01406 tRNA synthetases class I (C) catalytic domain CF59_RS05745 PF04307 LexA-binding, inner membrane-associated putative hydrolase CF59_RS05755 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CF59_RS05755 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CF59_RS05760 PF00419 Fimbrial protein CF59_RS05765 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF59_RS05765 PF02753 Pili assembly chaperone PapD, C-terminal domain CF59_RS05770 PF00577 Outer membrane usher protein CF59_RS05770 PF13954 PapC N-terminal domain CF59_RS05770 PF13953 PapC C-terminal domain CF59_RS05775 PF00419 Fimbrial protein CF59_RS05780 PF00419 Fimbrial protein CF59_RS05785 PF00072 Response regulator receiver domain CF59_RS05785 PF00196 Bacterial regulatory proteins, luxR family CF59_RS05795 PF00589 Phage integrase family CF59_RS05850 PF01381 Helix-turn-helix CF59_RS05850 PF00717 Peptidase S24-like CF59_RS05870 PF06992 Replication protein P CF59_RS05880 PF00893 Small Multidrug Resistance protein CF59_RS05890 PF13408 Recombinase zinc beta ribbon domain CF59_RS05890 PF07508 Recombinase CF59_RS05890 PF00239 Resolvase, N terminal domain CF59_RS05895 PF01161 Phosphatidylethanolamine-binding protein CF59_RS05900 PF12833 Helix-turn-helix domain CF59_RS05915 PF07102 Protein of unknown function (DUF1364) CF59_RS05920 PF05866 Endodeoxyribonuclease RusA CF59_RS05930 PF06530 Phage antitermination protein Q CF59_RS05935 PF00267 Gram-negative porin CF59_RS05940 PF04971 Bacteriophage P21 holin S CF59_RS05945 PF00959 Phage lysozyme CF59_RS05950 PF03245 Bacteriophage Rz lysis protein CF59_RS05965 PF07166 Protein of unknown function (DUF1398) CF59_RS05970 PF13132 Domain of unknown function (DUF3950) CF59_RS05985 PF07471 Phage DNA packaging protein Nu1 CF59_RS05990 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CF59_RS05995 PF02831 gpW CF59_RS06005 PF01957 NfeD-like C-terminal, partner-binding CF59_RS06005 PF01972 Serine dehydrogenase proteinase CF59_RS06015 PF03864 Phage major capsid protein E CF59_RS06055 PF06791 Prophage tail length tape measure protein CF59_RS06090 PF06316 Enterobacterial Ail/Lom protein CF59_RS06095 PF07484 Phage Tail Collar Domain CF59_RS06095 PF08400 Prophage tail fibre N-terminal CF59_RS06095 PF03335 Phage tail fibre repeat CF59_RS06115 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CF59_RS06120 PF12833 Helix-turn-helix domain CF59_RS06125 PF01278 Omptin family CF59_RS06135 PF12833 Helix-turn-helix domain CF59_RS06140 PF14488 Domain of unknown function (DUF4434) CF59_RS06145 PF13283 Bacteriophage N adsorption protein A C-term CF59_RS06150 PF13632 Glycosyl transferase family group 2 CF59_RS06150 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CF59_RS06155 PF13808 DDE_Tnp_1-associated CF59_RS06155 PF01609 Transposase DDE domain CF59_RS06165 PF05488 PAAR motif CF59_RS06165 PF05593 RHS Repeat CF59_RS06195 PF05488 PAAR motif CF59_RS06195 PF05593 RHS Repeat CF59_RS06205 PF04717 Type VI secretion system, phage-baseplate injector CF59_RS06210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS06210 PF00672 HAMP domain CF59_RS06210 PF00512 His Kinase A (phospho-acceptor) domain CF59_RS06215 PF00072 Response regulator receiver domain CF59_RS06215 PF00486 Transcriptional regulatory protein, C terminal CF59_RS06220 PF02321 Outer membrane efflux protein CF59_RS06225 PF11604 Copper binding periplasmic protein CusF CF59_RS06230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF59_RS06230 PF00529 HlyD membrane-fusion protein of T1SS CF59_RS06235 PF00873 AcrB/AcrD/AcrF family CF59_RS06240 PF00324 Amino acid permease CF59_RS06245 PF00924 Mechanosensitive ion channel CF59_RS06255 PF04237 YjbR CF59_RS06260 PF06643 Protein of unknown function (DUF1158) CF59_RS06265 PF04107 Glutamate-cysteine ligase family 2(GCS2) CF59_RS06280 PF00665 Integrase core domain CF59_RS06280 PF13333 Integrase core domain CF59_RS06280 PF13276 HTH-like domain CF59_RS06285 PF01848 Hok/gef family CF59_RS06290 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CF59_RS06290 PF01648 4'-phosphopantetheinyl transferase superfamily CF59_RS06300 PF07715 TonB-dependent Receptor Plug Domain CF59_RS06300 PF00593 TonB dependent receptor CF59_RS06305 PF00756 Putative esterase CF59_RS06305 PF11806 Domain of unknown function (DUF3327) CF59_RS06310 PF03621 MbtH-like protein CF59_RS06315 PF00975 Thioesterase domain CF59_RS06315 PF00668 Condensation domain CF59_RS06315 PF00550 Phosphopantetheine attachment site CF59_RS06315 PF13193 AMP-binding enzyme C-terminal domain CF59_RS06315 PF00501 AMP-binding enzyme CF59_RS06320 PF02706 Chain length determinant protein CF59_RS06325 PF00005 ABC transporter CF59_RS06330 PF01032 FecCD transport family CF59_RS06335 PF01032 FecCD transport family CF59_RS06340 PF05977 Transmembrane secretion effector CF59_RS06345 PF01497 Periplasmic binding protein CF59_RS06350 PF00425 chorismate binding enzyme CF59_RS06355 PF13193 AMP-binding enzyme C-terminal domain CF59_RS06355 PF00501 AMP-binding enzyme CF59_RS06360 PF00857 Isochorismatase family CF59_RS06360 PF00550 Phosphopantetheine attachment site CF59_RS06370 PF03061 Thioesterase superfamily CF59_RS06375 PF13722 5TM C-terminal transporter carbon starvation CstA CF59_RS06375 PF02554 Carbon starvation protein CstA CF59_RS06380 PF04328 Selenoprotein, putative CF59_RS06385 PF00465 Iron-containing alcohol dehydrogenase CF59_RS06390 PF00155 Aminotransferase class I and II CF59_RS06395 PF02195 ParB-like nuclease domain CF59_RS06400 PF11922 Domain of unknown function (DUF3440) CF59_RS06400 PF01507 Phosphoadenosine phosphosulfate reductase family CF59_RS06405 PF03466 LysR substrate binding domain CF59_RS06405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS06410 PF13098 Thioredoxin-like domain CF59_RS06415 PF10417 C-terminal domain of 1-Cys peroxiredoxin CF59_RS06415 PF00578 AhpC/TSA family CF59_RS06420 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF59_RS06420 PF13192 Thioredoxin domain CF59_RS06425 PF00582 Universal stress protein family CF59_RS06430 PF14760 Rnk N-terminus CF59_RS06430 PF01272 Transcription elongation factor, GreA/GreB, C-term CF59_RS06435 PF00445 Ribonuclease T2 family CF59_RS06440 PF00939 Sodium:sulfate symporter transmembrane region CF59_RS06445 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CF59_RS06450 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CF59_RS06455 PF04223 Citrate lyase, alpha subunit (CitF) CF59_RS06460 PF03328 HpcH/HpaI aldolase/citrate lyase family CF59_RS06465 PF06857 Malonate decarboxylase delta subunit (MdcD) CF59_RS06470 PF08218 Citrate lyase ligase C-terminal domain CF59_RS06475 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CF59_RS06475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS06475 PF00989 PAS fold CF59_RS06475 PF17203 Single cache domain 3 CF59_RS06480 PF00072 Response regulator receiver domain CF59_RS06480 PF12431 Transcriptional regulator CF59_RS06485 PF03606 C4-dicarboxylate anaerobic carrier CF59_RS06490 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP CF59_RS06495 PF00313 'Cold-shock' DNA-binding domain CF59_RS06500 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CF59_RS06505 PF00795 Carbon-nitrogen hydrolase CF59_RS06510 PF02416 mttA/Hcf106 family CF59_RS06515 PF04055 Radical SAM superfamily CF59_RS06515 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CF59_RS06520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS06520 PF03466 LysR substrate binding domain CF59_RS06530 PF03099 Biotin/lipoate A/B protein ligase family CF59_RS06535 PF04359 Protein of unknown function (DUF493) CF59_RS06540 PF07943 Penicillin-binding protein 5, C-terminal domain CF59_RS06540 PF00768 D-alanyl-D-alanine carboxypeptidase CF59_RS06545 PF03330 Lytic transglycolase CF59_RS06545 PF05036 Sporulation related domain CF59_RS06550 PF01098 Cell cycle protein CF59_RS06555 PF00905 Penicillin binding protein transpeptidase domain CF59_RS06555 PF03717 Penicillin-binding Protein dimerisation domain CF59_RS06560 PF02590 Predicted SPOUT methyltransferase CF59_RS06570 PF00300 Histidine phosphatase superfamily (branch 1) CF59_RS06575 PF01467 Cytidylyltransferase-like CF59_RS06580 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CF59_RS06580 PF06144 DNA polymerase III, delta subunit CF59_RS06585 PF04390 Lipopolysaccharide-assembly CF59_RS06590 PF00133 tRNA synthetases class I (I, L, M and V) CF59_RS06590 PF08264 Anticodon-binding domain of tRNA CF59_RS06590 PF13603 Leucyl-tRNA synthetase, Domain 2 CF59_RS06595 PF07295 Zinc-ribbon containing domain CF59_RS06600 PF01156 Inosine-uridine preferring nucleoside hydrolase CF59_RS06605 PF00005 ABC transporter CF59_RS06610 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS06615 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS06620 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF59_RS06625 PF00795 Carbon-nitrogen hydrolase CF59_RS06630 PF00571 CBS domain CF59_RS06630 PF03471 Transporter associated domain CF59_RS06635 PF02130 Uncharacterized protein family UPF0054 CF59_RS06640 PF02562 PhoH-like protein CF59_RS06645 PF01938 TRAM domain CF59_RS06645 PF04055 Radical SAM superfamily CF59_RS06645 PF00919 Uncharacterized protein family UPF0004 CF59_RS06650 PF01494 FAD binding domain CF59_RS06690 PF00733 Asparagine synthase CF59_RS06690 PF13537 Glutamine amidotransferase domain CF59_RS06695 PF13344 Haloacid dehalogenase-like hydrolase CF59_RS06700 PF01047 MarR family CF59_RS06700 PF00480 ROK family CF59_RS06705 PF01979 Amidohydrolase family CF59_RS06710 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CF59_RS06715 PF02378 Phosphotransferase system, EIIC CF59_RS06715 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CF59_RS06715 PF00367 phosphotransferase system, EIIB CF59_RS06720 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CF59_RS06720 PF00749 tRNA synthetases class I (E and Q), catalytic domain CF59_RS06725 PF03573 outer membrane porin, OprD family CF59_RS06730 PF13982 YbfN-like lipoprotein CF59_RS06735 PF01475 Ferric uptake regulator family CF59_RS06750 PF00258 Flavodoxin CF59_RS06755 PF01402 Ribbon-helix-helix protein, copG family CF59_RS06760 PF12697 Alpha/beta hydrolase family CF59_RS06765 PF03925 SeqA protein C-terminal domain CF59_RS06765 PF17206 SeqA protein N-terminal domain CF59_RS06770 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CF59_RS06770 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CF59_RS06770 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CF59_RS06770 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CF59_RS06775 PF00486 Transcriptional regulatory protein, C terminal CF59_RS06775 PF00072 Response regulator receiver domain CF59_RS06780 PF00512 His Kinase A (phospho-acceptor) domain CF59_RS06780 PF02702 Osmosensitive K+ channel His kinase sensor domain CF59_RS06780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS06780 PF13492 GAF domain CF59_RS06780 PF13493 Domain of unknown function (DUF4118) CF59_RS06785 PF02669 K+-transporting ATPase, c chain CF59_RS06795 PF03814 Potassium-transporting ATPase A subunit CF59_RS06800 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) CF59_RS06805 PF10725 Protein of unknown function (DUF2517) CF59_RS06810 PF05593 RHS Repeat CF59_RS06810 PF03527 RHS protein CF59_RS06820 PF08349 Protein of unknown function (DUF1722) CF59_RS06825 PF00875 DNA photolyase CF59_RS06825 PF03441 FAD binding domain of DNA photolyase CF59_RS06830 PF00854 POT family CF59_RS06835 PF01784 NIF3 (NGG1p interacting factor 3) CF59_RS06840 PF02682 Carboxyltransferase domain, subdomain C and D CF59_RS06845 PF02626 Carboxyltransferase domain, subdomain A and B CF59_RS06850 PF03746 LamB/YcsF family CF59_RS06855 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CF59_RS06855 PF06827 Zinc finger found in FPG and IleRS CF59_RS06855 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CF59_RS06860 PF05145 Transition state regulatory protein AbrB CF59_RS06865 PF00419 Fimbrial protein CF59_RS06870 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF59_RS06870 PF02753 Pili assembly chaperone PapD, C-terminal domain CF59_RS06875 PF13954 PapC N-terminal domain CF59_RS06875 PF13953 PapC C-terminal domain CF59_RS06875 PF00577 Outer membrane usher protein CF59_RS06880 PF00419 Fimbrial protein CF59_RS06885 PF00285 Citrate synthase, C-terminal domain CF59_RS06895 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CF59_RS06900 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CF59_RS06905 PF02910 Fumarate reductase flavoprotein C-term CF59_RS06905 PF00890 FAD binding domain CF59_RS06910 PF13085 2Fe-2S iron-sulfur cluster binding domain CF59_RS06920 PF00676 Dehydrogenase E1 component CF59_RS06920 PF02779 Transketolase, pyrimidine binding domain CF59_RS06920 PF16870 2-oxoglutarate dehydrogenase C-terminal CF59_RS06920 PF16078 2-oxoglutarate dehydrogenase N-terminus CF59_RS06925 PF00364 Biotin-requiring enzyme CF59_RS06925 PF02817 e3 binding domain CF59_RS06925 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CF59_RS06930 PF08442 ATP-grasp domain CF59_RS06930 PF00549 CoA-ligase CF59_RS06935 PF02629 CoA binding domain CF59_RS06935 PF00549 CoA-ligase CF59_RS06945 PF12557 Cob(I)alamin adenosyltransferase N terminal CF59_RS06945 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CF59_RS06950 PF05681 Fumarate hydratase (Fumerase) CF59_RS06950 PF05683 Fumarase C-terminus CF59_RS06955 PF00375 Sodium:dicarboxylate symporter family CF59_RS06965 PF06368 Methylaspartate mutase E chain (MutE) CF59_RS06970 PF13941 MutL protein CF59_RS06975 PF02310 B12 binding domain CF59_RS06995 PF01654 Cytochrome bd terminal oxidase subunit I CF59_RS07000 PF02322 Cytochrome bd terminal oxidase subunit II CF59_RS07005 PF08173 Membrane bound YbgT-like protein CF59_RS07010 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CF59_RS07015 PF03061 Thioesterase superfamily CF59_RS07020 PF01618 MotA/TolQ/ExbB proton channel family CF59_RS07025 PF02472 Biopolymer transport protein ExbD/TolR CF59_RS07030 PF06519 TolA C-terminal CF59_RS07035 PF07676 WD40-like Beta Propeller Repeat CF59_RS07035 PF04052 TolB amino-terminal domain CF59_RS07040 PF00691 OmpA family CF59_RS07045 PF16331 TolA binding protein trimerisation CF59_RS07045 PF13174 Tetratricopeptide repeat CF59_RS07055 PF02445 Quinolinate synthetase A protein CF59_RS07060 PF04973 Nicotinamide mononucleotide transporter CF59_RS07065 PF01545 Cation efflux family CF59_RS07070 PF13985 YbgS-like protein CF59_RS07080 PF00793 DAHP synthetase I family CF59_RS07085 PF00300 Histidine phosphatase superfamily (branch 1) CF59_RS07090 PF01263 Aldose 1-epimerase CF59_RS07095 PF10509 Galactokinase galactose-binding signature CF59_RS07095 PF08544 GHMP kinases C terminal CF59_RS07095 PF00288 GHMP kinases N terminal domain CF59_RS07100 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CF59_RS07100 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CF59_RS07105 PF16363 GDP-mannose 4,6 dehydratase CF59_RS07110 PF00005 ABC transporter CF59_RS07120 PF03459 TOBE domain CF59_RS07120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS07125 PF10766 Multidrug efflux pump-associated protein AcrZ CF59_RS07135 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS07140 PF03459 TOBE domain CF59_RS07140 PF00005 ABC transporter CF59_RS07150 PF10282 Lactonase, 7-bladed beta-propeller CF59_RS07160 PF04303 PrpF protein CF59_RS07165 PF00939 Sodium:sulfate symporter transmembrane region CF59_RS07170 PF00694 Aconitase C-terminal domain CF59_RS07170 PF00330 Aconitase family (aconitate hydratase) CF59_RS07175 PF01095 Pectinesterase CF59_RS07180 PF01161 Phosphatidylethanolamine-binding protein CF59_RS07185 PF00202 Aminotransferase class-III CF59_RS07190 PF04055 Radical SAM superfamily CF59_RS07190 PF06968 Biotin and Thiamin Synthesis associated domain CF59_RS07195 PF00155 Aminotransferase class I and II CF59_RS07200 PF08241 Methyltransferase domain CF59_RS07210 PF02151 UvrB/uvrC motif CF59_RS07210 PF04851 Type III restriction enzyme, res subunit CF59_RS07210 PF00271 Helicase conserved C-terminal domain CF59_RS07210 PF17757 UvrB interaction domain CF59_RS07210 PF12344 Ultra-violet resistance protein B CF59_RS07215 PF01933 Uncharacterised protein family UPF0052 CF59_RS07225 PF06463 Molybdenum Cofactor Synthesis C CF59_RS07225 PF04055 Radical SAM superfamily CF59_RS07230 PF00994 Probable molybdopterin binding domain CF59_RS07235 PF01967 MoaC family CF59_RS07240 PF02597 ThiS family CF59_RS07245 PF02391 MoaE protein CF59_RS07250 PF01027 Inhibitor of apoptosis-promoting Bax1 CF59_RS07255 PF01027 Inhibitor of apoptosis-promoting Bax1 CF59_RS07260 PF03706 Lysylphosphatidylglycerol synthase TM region CF59_RS07265 PF13091 PLD-like domain CF59_RS07270 PF03372 Endonuclease/Exonuclease/phosphatase family CF59_RS07275 PF11076 Putative inner membrane protein YbhQ CF59_RS07290 PF00005 ABC transporter CF59_RS07295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF59_RS07300 PF00440 Bacterial regulatory proteins, tetR family CF59_RS07300 PF09209 Tetracyclin repressor-like, C-terminal domain CF59_RS07305 PF00270 DEAD/DEAH box helicase CF59_RS07305 PF00271 Helicase conserved C-terminal domain CF59_RS07320 PF13307 Helicase C-terminal domain CF59_RS07320 PF00270 DEAD/DEAH box helicase CF59_RS07320 PF06733 DEAD_2 CF59_RS07325 PF02885 Glycosyl transferase family, helical bundle domain CF59_RS07330 PF02615 Malate/L-lactate dehydrogenase CF59_RS07335 PF07338 Protein of unknown function (DUF1471) CF59_RS07340 PF01258 Prokaryotic dksA/traR C4-type zinc finger CF59_RS07345 PF18331 PKHD-type hydroxylase C-terminal domain CF59_RS07345 PF13640 2OG-Fe(II) oxygenase superfamily CF59_RS07350 PF07715 TonB-dependent Receptor Plug Domain CF59_RS07350 PF00593 TonB dependent receptor CF59_RS07355 PF07338 Protein of unknown function (DUF1471) CF59_RS07360 PF05971 RNA methyltransferase CF59_RS07365 PF00924 Mechanosensitive ion channel CF59_RS07375 PF00005 ABC transporter CF59_RS07380 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS07385 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF59_RS07395 PF00210 Ferritin-like domain CF59_RS07400 PF00892 EamA-like transporter family CF59_RS07405 PF13505 Outer membrane protein beta-barrel domain CF59_RS07410 PF00884 Sulfatase CF59_RS07420 PF01325 Iron dependent repressor, N-terminal DNA binding domain CF59_RS07420 PF02742 Iron dependent repressor, metal binding and dimerisation domain CF59_RS07425 PF03600 Citrate transporter CF59_RS07430 PF03734 L,D-transpeptidase catalytic domain CF59_RS07430 PF17969 L,D-transpeptidase C-terminal domain CF59_RS07435 PF00005 ABC transporter CF59_RS07435 PF12848 ABC transporter CF59_RS07440 PF17137 Domain of unknown function (DUF5110) CF59_RS07440 PF13802 Galactose mutarotase-like CF59_RS07440 PF16338 Domain of unknown function (DUF4968) CF59_RS07440 PF01055 Glycosyl hydrolases family 31 CF59_RS07445 PF07690 Major Facilitator Superfamily CF59_RS07455 PF00356 Bacterial regulatory proteins, lacI family CF59_RS07460 PF07350 Protein of unknown function (DUF1479) CF59_RS07470 PF01228 Glycine radical CF59_RS07470 PF02901 Pyruvate formate lyase-like CF59_RS07475 PF04055 Radical SAM superfamily CF59_RS07480 PF00923 Transaldolase/Fructose-6-phosphate aldolase CF59_RS07485 PF00899 ThiF family CF59_RS07490 PF00994 Probable molybdopterin binding domain CF59_RS07490 PF03454 MoeA C-terminal region (domain IV) CF59_RS07490 PF03453 MoeA N-terminal region (domain I and II) CF59_RS07495 PF01112 Asparaginase CF59_RS07500 PF00005 ABC transporter CF59_RS07500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF59_RS07505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF59_RS07510 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS07515 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS07515 PF12911 N-terminal TM domain of oligopeptide transport permease C CF59_RS07520 PF17153 Periplasmic sensor domain, extracellular CF59_RS07520 PF00563 EAL domain CF59_RS07525 PF00990 Diguanylate cyclase, GGDEF domain CF59_RS07525 PF17156 Gammaproteobacterial periplasmic sensor domain CF59_RS07535 PF10799 Biofilm formation protein (YliH/bssR) CF59_RS07540 PF07995 Glucose / Sorbosone dehydrogenase CF59_RS07545 PF13417 Glutathione S-transferase, N-terminal domain CF59_RS07545 PF00043 Glutathione S-transferase, C-terminal domain CF59_RS07550 PF00768 D-alanyl-D-alanine carboxypeptidase CF59_RS07550 PF07943 Penicillin-binding protein 5, C-terminal domain CF59_RS07555 PF00455 DeoR C terminal sensor domain CF59_RS07555 PF08220 DeoR-like helix-turn-helix domain CF59_RS07560 PF01569 PAP2 superfamily CF59_RS07565 PF07690 Major Facilitator Superfamily CF59_RS07580 PF07690 Major Facilitator Superfamily CF59_RS07585 PF00440 Bacterial regulatory proteins, tetR family CF59_RS07590 PF06826 Predicted Permease Membrane Region CF59_RS07590 PF02080 TrkA-C domain CF59_RS07595 PF11045 Putative inner membrane protein of Enterobacteriaceae CF59_RS07600 PF00462 Glutaredoxin CF59_RS07605 PF07214 Protein of unknown function (DUF1418) CF59_RS07610 PF00881 Nitroreductase family CF59_RS07615 PF08443 RimK-like ATP-grasp domain CF59_RS07615 PF18030 RimK PreATP-grasp domain CF59_RS07620 PF10722 Putative bacterial sensory transduction regulator CF59_RS07630 PF13416 Bacterial extracellular solute-binding protein CF59_RS07635 PF08402 TOBE domain CF59_RS07635 PF00005 ABC transporter CF59_RS07640 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS07645 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS07650 PF10767 Protein of unknown function (DUF2593) CF59_RS07655 PF05958 tRNA (Uracil-5-)-methyltransferase CF59_RS07660 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF59_RS07665 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS07670 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS07675 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF59_RS07680 PF00005 ABC transporter CF59_RS07685 PF12883 Protein of unknown function (DUF3828) CF59_RS07705 PF01906 Putative heavy-metal-binding CF59_RS07710 PF01510 N-acetylmuramoyl-L-alanine amidase CF59_RS07715 PF01370 NAD dependent epimerase/dehydratase family CF59_RS07720 PF13460 NAD(P)H-binding CF59_RS07720 PF11066 Protein of unknown function (DUF2867) CF59_RS07725 PF01212 Beta-eliminating lyase CF59_RS07730 PF00205 Thiamine pyrophosphate enzyme, central domain CF59_RS07730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CF59_RS07730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CF59_RS07735 PF00970 Oxidoreductase FAD-binding domain CF59_RS07735 PF00111 2Fe-2S iron-sulfur cluster binding domain CF59_RS07735 PF00175 Oxidoreductase NAD-binding domain CF59_RS07740 PF03063 Prismane/CO dehydrogenase family CF59_RS07745 PF03956 Lysine exporter LysO CF59_RS07750 PF00230 Major intrinsic protein CF59_RS07760 PF11398 Protein of unknown function (DUF2813) CF59_RS07765 PF04393 Protein of unknown function (DUF535) CF59_RS07770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF59_RS07775 PF02687 FtsX-like permease family CF59_RS07775 PF00005 ABC transporter CF59_RS07775 PF12704 MacB-like periplasmic core domain CF59_RS07780 PF00313 'Cold-shock' DNA-binding domain CF59_RS07785 PF02617 ATP-dependent Clp protease adaptor protein ClpS CF59_RS07790 PF00004 ATPase family associated with various cellular activities (AAA) CF59_RS07790 PF10431 C-terminal, D2-small domain, of ClpB protein CF59_RS07790 PF02861 Clp amino terminal domain, pathogenicity island component CF59_RS07790 PF17871 AAA lid domain CF59_RS07790 PF07724 AAA domain (Cdc48 subfamily) CF59_RS07800 PF01176 Translation initiation factor 1A / IF-1 CF59_RS07805 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CF59_RS07810 PF00664 ABC transporter transmembrane region CF59_RS07810 PF00005 ABC transporter CF59_RS07815 PF00005 ABC transporter CF59_RS07815 PF00664 ABC transporter transmembrane region CF59_RS07820 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF59_RS07825 PF01037 Lrp/AsnC ligand binding domain CF59_RS07830 PF01580 FtsK/SpoIIIE family CF59_RS07830 PF17854 FtsK alpha domain CF59_RS07830 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CF59_RS07830 PF09397 Ftsk gamma domain CF59_RS07835 PF03548 Outer membrane lipoprotein carrier protein LolA CF59_RS07840 PF16193 AAA C-terminal domain CF59_RS07840 PF12002 MgsA AAA+ ATPase C terminal CF59_RS07840 PF00004 ATPase family associated with various cellular activities (AAA) CF59_RS07845 PF02403 Seryl-tRNA synthetase N-terminal domain CF59_RS07845 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CF59_RS07850 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF59_RS07850 PF01568 Molydopterin dinucleotide binding domain CF59_RS07850 PF00384 Molybdopterin oxidoreductase CF59_RS07855 PF13247 4Fe-4S dicluster domain CF59_RS07855 PF12800 4Fe-4S binding domain CF59_RS07860 PF04976 DMSO reductase anchor subunit (DmsC) CF59_RS07865 PF00857 Isochorismatase family CF59_RS07870 PF07690 Major Facilitator Superfamily CF59_RS07875 PF13520 Amino acid permease CF59_RS07880 PF04055 Radical SAM superfamily CF59_RS07885 PF01228 Glycine radical CF59_RS07885 PF02901 Pyruvate formate lyase-like CF59_RS07890 PF01226 Formate/nitrite transporter CF59_RS07895 PF18381 YcaO cyclodehydratase C-terminal domain CF59_RS07895 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CF59_RS07900 PF04239 Protein of unknown function (DUF421) CF59_RS07905 PF00266 Aminotransferase class-V CF59_RS07910 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CF59_RS07915 PF01797 Transposase IS200 like CF59_RS07920 PF01435 Peptidase family M48 CF59_RS07925 PF02224 Cytidylate kinase CF59_RS07930 PF00575 S1 RNA binding domain CF59_RS07935 PF00216 Bacterial DNA-binding protein CF59_RS07945 PF00005 ABC transporter CF59_RS07945 PF00664 ABC transporter transmembrane region CF59_RS07950 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CF59_RS07955 PF06224 Winged helix DNA-binding domain CF59_RS07960 PF03966 Trm112p-like protein CF59_RS07965 PF02348 Cytidylyltransferase CF59_RS07970 PF01636 Phosphotransferase enzyme family CF59_RS07975 PF02698 DUF218 domain CF59_RS07980 PF13847 Methyltransferase domain CF59_RS07985 PF03882 MukF winged-helix domain CF59_RS07985 PF17193 MukF C-terminal domain CF59_RS07985 PF17192 MukF middle domain CF59_RS07990 PF04288 MukE-like family CF59_RS07995 PF04310 MukB N-terminal CF59_RS07995 PF16330 MukB hinge domain CF59_RS08000 PF03734 L,D-transpeptidase catalytic domain CF59_RS08000 PF01471 Putative peptidoglycan binding domain CF59_RS08005 PF05951 Bacterial protein of unknown function (DUF882) CF59_RS08010 PF00753 Metallo-beta-lactamase superfamily CF59_RS08015 PF00155 Aminotransferase class I and II CF59_RS08025 PF00267 Gram-negative porin CF59_RS08030 PF00152 tRNA synthetases class II (D, K and N) CF59_RS08030 PF01336 OB-fold nucleic acid binding domain CF59_RS08035 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CF59_RS08035 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CF59_RS08040 PF11940 Domain of unknown function (DUF3458) Ig-like fold CF59_RS08040 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CF59_RS08040 PF01433 Peptidase family M1 domain CF59_RS08045 PF13276 HTH-like domain CF59_RS08045 PF13333 Integrase core domain CF59_RS08045 PF00665 Integrase core domain CF59_RS08060 PF00005 ABC transporter CF59_RS08065 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS08070 PF00296 Luciferase-like monooxygenase CF59_RS08075 PF09084 NMT1/THI5 like CF59_RS08080 PF03358 NADPH-dependent FMN reductase CF59_RS08085 PF01180 Dihydroorotate dehydrogenase CF59_RS08090 PF07126 Cell-division protein ZapC CF59_RS08095 PF03476 MOSC N-terminal beta barrel domain CF59_RS08095 PF03473 MOSC domain CF59_RS08095 PF00111 2Fe-2S iron-sulfur cluster binding domain CF59_RS08100 PF01170 Putative RNA methylase family UPF0020 CF59_RS08100 PF10672 S-adenosylmethionine-dependent methyltransferase CF59_RS08100 PF02926 THUMP domain CF59_RS08105 PF12848 ABC transporter CF59_RS08105 PF16326 ABC transporter C-terminal domain CF59_RS08105 PF00005 ABC transporter CF59_RS08110 PF04403 Paraquat-inducible protein A CF59_RS08115 PF02470 MlaD protein CF59_RS08120 PF03886 ABC-type transport auxiliary lipoprotein component CF59_RS08125 PF04957 Ribosome modulation factor CF59_RS08130 PF07977 FabA-like domain CF59_RS08135 PF05362 Lon protease (S16) C-terminal proteolytic domain CF59_RS08135 PF13654 AAA domain CF59_RS08140 PF17414 MatP C-terminal ribbon-helix-helix domain CF59_RS08140 PF06303 MatP N-terminal domain CF59_RS08145 PF00691 OmpA family CF59_RS08145 PF01389 OmpA-like transmembrane domain CF59_RS08155 PF03846 Cell division inhibitor SulA CF59_RS08160 PF04993 TfoX N-terminal domain CF59_RS08160 PF04994 TfoX C-terminal domain CF59_RS08165 PF12805 FUSC-like inner membrane protein yccS CF59_RS08170 PF03733 Inner membrane component domain CF59_RS08175 PF13361 UvrD-like helicase C-terminal domain CF59_RS08175 PF00580 UvrD/REP helicase N-terminal domain CF59_RS08175 PF12462 DNA helicase IV / RNA helicase N terminal CF59_RS08180 PF02142 MGS-like domain CF59_RS08185 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CF59_RS08195 PF13380 CoA binding domain CF59_RS08200 PF08755 Hemimethylated DNA-binding protein YccV like CF59_RS08205 PF17785 PUA-like domain CF59_RS08205 PF10672 S-adenosylmethionine-dependent methyltransferase CF59_RS08210 PF00708 Acylphosphatase CF59_RS08215 PF04358 DsrC like protein CF59_RS08220 PF01027 Inhibitor of apoptosis-promoting Bax1 CF59_RS08230 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CF59_RS08230 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CF59_RS08235 PF00374 Nickel-dependent hydrogenase CF59_RS08240 PF01292 Prokaryotic cytochrome b561 CF59_RS08245 PF01750 Hydrogenase maturation protease CF59_RS08250 PF07449 Hydrogenase-1 expression protein HyaE CF59_RS08255 PF04809 HupH hydrogenase expression protein, C-terminal conserved region CF59_RS08260 PF01654 Cytochrome bd terminal oxidase subunit I CF59_RS08265 PF02322 Cytochrome bd terminal oxidase subunit II CF59_RS08270 PF08173 Membrane bound YbgT-like protein CF59_RS08275 PF00328 Histidine phosphatase superfamily (branch 2) CF59_RS08280 PF00313 'Cold-shock' DNA-binding domain CF59_RS08285 PF00313 'Cold-shock' DNA-binding domain CF59_RS08290 PF15939 Putative antitoxin of bacterial toxin-antitoxin system CF59_RS08295 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system CF59_RS08300 PF12801 4Fe-4S binding domain CF59_RS08305 PF00512 His Kinase A (phospho-acceptor) domain CF59_RS08305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS08305 PF00672 HAMP domain CF59_RS08305 PF00072 Response regulator receiver domain CF59_RS08305 PF01627 Hpt domain CF59_RS08310 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CF59_RS08315 PF00072 Response regulator receiver domain CF59_RS08315 PF00486 Transcriptional regulatory protein, C terminal CF59_RS08320 PF03264 NapC/NirT cytochrome c family, N-terminal region CF59_RS08325 PF18364 Molybdopterin oxidoreductase N-terminal domain CF59_RS08325 PF01568 Molydopterin dinucleotide binding domain CF59_RS08325 PF00384 Molybdopterin oxidoreductase CF59_RS08330 PF02613 Nitrate reductase delta subunit CF59_RS08340 PF01556 DnaJ C terminal domain CF59_RS08340 PF00226 DnaJ domain CF59_RS08350 PF00328 Histidine phosphatase superfamily (branch 2) CF59_RS08355 PF13993 YccJ-like protein CF59_RS08360 PF03358 NADPH-dependent FMN reductase CF59_RS08370 PF10685 Stress-induced bacterial acidophilic repeat motif CF59_RS08375 PF00860 Permease family CF59_RS08380 PF01613 Flavin reductase like domain CF59_RS08385 PF00881 Nitroreductase family CF59_RS08390 PF12697 Alpha/beta hydrolase family CF59_RS08395 PF01042 Endoribonuclease L-PSP CF59_RS08400 PF00857 Isochorismatase family CF59_RS08405 PF00296 Luciferase-like monooxygenase CF59_RS08410 PF00440 Bacterial regulatory proteins, tetR family CF59_RS08410 PF08362 YcdC-like protein, C-terminal region CF59_RS08415 PF01619 Proline dehydrogenase CF59_RS08415 PF00171 Aldehyde dehydrogenase family CF59_RS08415 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CF59_RS08415 PF14850 DNA-binding domain of Proline dehydrogenase CF59_RS08425 PF00474 Sodium:solute symporter family CF59_RS08435 PF03239 Iron permease FTR1 family CF59_RS08440 PF13473 Cupredoxin-like domain CF59_RS08440 PF09375 Imelysin CF59_RS08445 PF04261 Dyp-type peroxidase family CF59_RS08450 PF02562 PhoH-like protein CF59_RS08470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CF59_RS08475 PF02811 PHP domain CF59_RS08480 PF02613 Nitrate reductase delta subunit CF59_RS08485 PF06496 Protein of unknown function (DUF1097) CF59_RS08490 PF03783 Curli production assembly/transport component CsgG CF59_RS08495 PF10614 Type VIII secretion system (T8SS), CsgF protein CF59_RS08500 PF10627 Curli assembly protein CsgE CF59_RS08505 PF00196 Bacterial regulatory proteins, luxR family CF59_RS08515 PF07012 Curlin associated repeat CF59_RS08520 PF07012 Curlin associated repeat CF59_RS08525 PF10610 Thin aggregative fimbriae synthesis protein CF59_RS08535 PF01661 Macro domain CF59_RS08540 PF13091 PLD-like domain CF59_RS08545 PF01757 Acyltransferase family CF59_RS08560 PF04349 Periplasmic glucan biosynthesis protein, MdoG CF59_RS08565 PF00535 Glycosyl transferase family 2 CF59_RS08570 PF07119 Protein of unknown function (DUF1375) CF59_RS08575 PF13984 MsyB protein CF59_RS08585 PF07690 Major Facilitator Superfamily CF59_RS08590 PF03279 Bacterial lipid A biosynthesis acyltransferase CF59_RS08595 PF00581 Rhodanese-like domain CF59_RS08595 PF12368 Rhodanase C-terminal CF59_RS08595 PF17773 UPF0176 acylphosphatase like domain CF59_RS08600 PF04264 YceI-like domain CF59_RS08605 PF01292 Prokaryotic cytochrome b561 CF59_RS08610 PF10968 Protein of unknown function (DUF2770) CF59_RS08615 PF01266 FAD dependent oxidoreductase CF59_RS08620 PF13991 BssS protein family CF59_RS08625 PF06183 DinI-like family CF59_RS08635 PF07273 Protein of unknown function (DUF1439) CF59_RS08640 PF04399 Glutaredoxin 2, C terminal domain CF59_RS08640 PF13417 Glutathione S-transferase, N-terminal domain CF59_RS08645 PF07690 Major Facilitator Superfamily CF59_RS08650 PF13302 Acetyltransferase (GNAT) domain CF59_RS08655 PF04337 Protein of unknown function, DUF480 CF59_RS08660 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CF59_RS08665 PF03023 Lipid II flippase MurJ CF59_RS08670 PF05130 FlgN protein CF59_RS08675 PF04316 Anti-sigma-28 factor, FlgM CF59_RS08680 PF13144 Chaperone for flagella basal body P-ring formation CF59_RS08685 PF00460 Flagella basal body rod protein CF59_RS08690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CF59_RS08690 PF00460 Flagella basal body rod protein CF59_RS08695 PF13861 FlgD Tudor-like domain CF59_RS08695 PF13860 FlgD Ig-like domain CF59_RS08695 PF03963 Flagellar hook capping protein - N-terminal region CF59_RS08700 PF00460 Flagella basal body rod protein CF59_RS08700 PF07559 Flagellar basal body protein FlaE CF59_RS08700 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CF59_RS08705 PF00460 Flagella basal body rod protein CF59_RS08705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CF59_RS08710 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CF59_RS08710 PF00460 Flagella basal body rod protein CF59_RS08715 PF02107 Flagellar L-ring protein CF59_RS08720 PF02119 Flagellar P-ring protein CF59_RS08725 PF10135 Rod binding protein CF59_RS08725 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CF59_RS08730 PF00460 Flagella basal body rod protein CF59_RS08730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CF59_RS08735 PF00669 Bacterial flagellin N-terminal helical region CF59_RS08740 PF12111 Polyribonucleotide phosphorylase C terminal CF59_RS08740 PF10150 Ribonuclease E/G family CF59_RS08740 PF00575 S1 RNA binding domain CF59_RS08750 PF01479 S4 domain CF59_RS08750 PF00849 RNA pseudouridylate synthase CF59_RS08755 PF02545 Maf-like protein CF59_RS08760 PF02620 Large ribosomal RNA subunit accumulation protein YceD CF59_RS08765 PF01783 Ribosomal L32p protein family CF59_RS08770 PF02504 Fatty acid synthesis protein CF59_RS08775 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CF59_RS08775 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CF59_RS08780 PF00698 Acyl transferase domain CF59_RS08790 PF00550 Phosphopantetheine attachment site CF59_RS08795 PF02801 Beta-ketoacyl synthase, C-terminal domain CF59_RS08795 PF00109 Beta-ketoacyl synthase, N-terminal domain CF59_RS08800 PF01063 Amino-transferase class IV CF59_RS08805 PF02618 YceG-like family CF59_RS08810 PF02223 Thymidylate kinase CF59_RS08815 PF09115 DNA polymerase III, delta subunit, C terminal CF59_RS08820 PF01026 TatD related DNase CF59_RS08825 PF02378 Phosphotransferase system, EIIC CF59_RS08825 PF00367 phosphotransferase system, EIIB CF59_RS08830 PF00593 TonB dependent receptor CF59_RS08830 PF07715 TonB-dependent Receptor Plug Domain CF59_RS08835 PF01230 HIT domain CF59_RS08840 PF07233 Protein of unknown function (DUF1425) CF59_RS08845 PF13036 Peptidoglycan-synthase activator LpoB CF59_RS08850 PF01636 Phosphotransferase enzyme family CF59_RS08855 PF00933 Glycosyl hydrolase family 3 N terminal domain CF59_RS08860 PF05728 Uncharacterised protein family (UPF0227) CF59_RS08865 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF59_RS08870 PF05433 Glycine zipper 2TM domain CF59_RS08875 PF00440 Bacterial regulatory proteins, tetR family CF59_RS08880 PF07338 Protein of unknown function (DUF1471) CF59_RS08885 PF03734 L,D-transpeptidase catalytic domain CF59_RS08885 PF17969 L,D-transpeptidase C-terminal domain CF59_RS08885 PF01476 LysM domain CF59_RS08890 PF02559 CarD-like/TRCF domain CF59_RS08890 PF17757 UvrB interaction domain CF59_RS08890 PF00270 DEAD/DEAH box helicase CF59_RS08890 PF00271 Helicase conserved C-terminal domain CF59_RS08890 PF03461 TRCF domain CF59_RS08895 PF01757 Acyltransferase family CF59_RS08900 PF12704 MacB-like periplasmic core domain CF59_RS08900 PF02687 FtsX-like permease family CF59_RS08905 PF00005 ABC transporter CF59_RS08910 PF02687 FtsX-like permease family CF59_RS08910 PF12704 MacB-like periplasmic core domain CF59_RS08915 PF00480 ROK family CF59_RS08920 PF02146 Sir2 family CF59_RS08925 PF04536 TPM domain CF59_RS08930 PF12158 Protein of unknown function (DUF3592) CF59_RS08935 PF13416 Bacterial extracellular solute-binding protein CF59_RS08940 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS08945 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS08950 PF00005 ABC transporter CF59_RS08950 PF08402 TOBE domain CF59_RS08960 PF07687 Peptidase dimerisation domain CF59_RS08960 PF01546 Peptidase family M20/M25/M40 CF59_RS08965 PF08007 Cupin superfamily protein CF59_RS08970 PF08918 PhoQ Sensor CF59_RS08970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS08975 PF00072 Response regulator receiver domain CF59_RS08975 PF00486 Transcriptional regulatory protein, C terminal CF59_RS08980 PF00206 Lyase CF59_RS08980 PF08328 Adenylosuccinate lyase C-terminal CF59_RS08985 PF04356 Protein of unknown function (DUF489) CF59_RS08995 PF00293 NUDIX domain CF59_RS09000 PF00849 RNA pseudouridylate synthase CF59_RS09005 PF00180 Isocitrate/isopropylmalate dehydrogenase CF59_RS09020 PF07166 Protein of unknown function (DUF1398) CF59_RS09025 PF13411 MerR HTH family regulatory protein CF59_RS09030 PF00563 EAL domain CF59_RS09030 PF04940 Sensors of blue-light using FAD CF59_RS09035 PF10798 Biofilm development protein YmgB/AriR CF59_RS09045 PF10798 Biofilm development protein YmgB/AriR CF59_RS09055 PF00563 EAL domain CF59_RS09055 PF12792 CSS motif domain associated with EAL CF59_RS09070 PF03797 Autotransporter beta-domain CF59_RS09075 PF16456 YmgD protein CF59_RS09080 PF13436 Glycine-zipper domain CF59_RS09095 PF03776 Septum formation topological specificity factor MinE CF59_RS09100 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CF59_RS09105 PF05209 Septum formation inhibitor MinC, N-terminal domain CF59_RS09105 PF03775 Septum formation inhibitor MinC, C-terminal domain CF59_RS09110 PF05666 Fels-1 Prophage Protein-like CF59_RS09115 PF04151 Bacterial pre-peptidase C-terminal domain CF59_RS09125 PF05166 YcgL domain CF59_RS09130 PF01557 Fumarylacetoacetate (FAA) hydrolase family CF59_RS09135 PF03692 Putative zinc- or iron-chelating domain CF59_RS09140 PF06109 Haemolysin E (HlyE) CF59_RS09145 PF00717 Peptidase S24-like CF59_RS09150 PF13438 Domain of unknown function (DUF4113) CF59_RS09150 PF11798 IMS family HHH motif CF59_RS09150 PF11799 impB/mucB/samB family C-terminal domain CF59_RS09150 PF00817 impB/mucB/samB family CF59_RS09155 PF02600 Disulfide bond formation protein DsbB CF59_RS09160 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CF59_RS09165 PF07840 FadR C-terminal domain CF59_RS09165 PF00392 Bacterial regulatory proteins, gntR family CF59_RS09170 PF01797 Transposase IS200 like CF59_RS09175 PF04293 SpoVR like protein CF59_RS09180 PF01266 FAD dependent oxidoreductase CF59_RS09185 PF00842 Alanine racemase, C-terminal domain CF59_RS09185 PF01168 Alanine racemase, N-terminal domain CF59_RS09195 PF00999 Sodium/hydrogen exchanger family CF59_RS09195 PF03471 Transporter associated domain CF59_RS09195 PF02080 TrkA-C domain CF59_RS09200 PF02016 LD-carboxypeptidase N-terminal domain CF59_RS09200 PF17676 LD-carboxypeptidase C-terminal domain CF59_RS09205 PF01464 Transglycosylase SLT domain CF59_RS09210 PF07317 Flagellar regulator YcgR CF59_RS09210 PF07238 PilZ domain CF59_RS09215 PF04226 Transglycosylase associated protein CF59_RS09225 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CF59_RS09225 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CF59_RS09230 PF13649 Methyltransferase domain CF59_RS09235 PF00005 ABC transporter CF59_RS09240 PF01032 FecCD transport family CF59_RS09245 PF01497 Periplasmic binding protein CF59_RS09250 PF01204 Trehalase CF59_RS09255 PF00391 PEP-utilising enzyme, mobile domain CF59_RS09255 PF03610 PTS system fructose IIA component CF59_RS09255 PF00381 PTS HPr component phosphorylation site CF59_RS09255 PF05524 PEP-utilising enzyme, N-terminal CF59_RS09260 PF02734 DAK2 domain CF59_RS09265 PF02733 Dak1 domain CF59_RS09270 PF02954 Bacterial regulatory protein, Fis family CF59_RS09270 PF00989 PAS fold CF59_RS09270 PF00158 Sigma-54 interaction domain CF59_RS09275 PF03797 Autotransporter beta-domain CF59_RS09275 PF03212 Pertactin CF59_RS09285 PF01926 50S ribosome-binding GTPase CF59_RS09285 PF06071 Protein of unknown function (DUF933) CF59_RS09290 PF01195 Peptidyl-tRNA hydrolase CF59_RS09295 PF10762 Protein of unknown function (DUF2583) CF59_RS09300 PF01740 STAS domain CF59_RS09300 PF00916 Sulfate permease family CF59_RS09305 PF14572 Phosphoribosyl synthetase-associated domain CF59_RS09305 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CF59_RS09310 PF08544 GHMP kinases C terminal CF59_RS09310 PF00288 GHMP kinases N terminal domain CF59_RS09315 PF03550 Outer membrane lipoprotein LolB CF59_RS09320 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CF59_RS09320 PF01488 Shikimate / quinate 5-dehydrogenase CF59_RS09320 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CF59_RS09325 PF03462 PCRF domain CF59_RS09325 PF00472 RF-1 domain CF59_RS09330 PF17827 PrmC N-terminal domain CF59_RS09330 PF13847 Methyltransferase domain CF59_RS09335 PF04247 Invasion gene expression up-regulator, SirB CF59_RS09340 PF13369 Transglutaminase-like superfamily CF59_RS09345 PF00793 DAHP synthetase I family CF59_RS09350 PF13940 Toxin Ldr, type I toxin-antitoxin system CF59_RS09355 PF13940 Toxin Ldr, type I toxin-antitoxin system CF59_RS09360 PF01699 Sodium/calcium exchanger protein CF59_RS09365 PF06150 ChaB CF59_RS09370 PF04752 ChaC-like protein CF59_RS09375 PF02635 DsrE/DsrF-like family CF59_RS09380 PF11924 Inverse autotransporter, beta-domain CF59_RS09385 PF00072 Response regulator receiver domain CF59_RS09385 PF00196 Bacterial regulatory proteins, luxR family CF59_RS09390 PF07730 Histidine kinase CF59_RS09390 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CF59_RS09390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS09390 PF00672 HAMP domain CF59_RS09400 PF07690 Major Facilitator Superfamily CF59_RS09405 PF14710 Respiratory nitrate reductase alpha N-terminal CF59_RS09405 PF00384 Molybdopterin oxidoreductase CF59_RS09405 PF01568 Molydopterin dinucleotide binding domain CF59_RS09410 PF13247 4Fe-4S dicluster domain CF59_RS09410 PF14711 Respiratory nitrate reductase beta C-terminal CF59_RS09415 PF02613 Nitrate reductase delta subunit CF59_RS09420 PF02665 Nitrate reductase gamma subunit CF59_RS09435 PF00551 Formyl transferase CF59_RS09435 PF01842 ACT domain CF59_RS09440 PF02810 SEC-C motif CF59_RS09445 PF01734 Patatin-like phospholipase CF59_RS09450 PF00072 Response regulator receiver domain CF59_RS09455 PF00483 Nucleotidyl transferase CF59_RS09460 PF00816 H-NS histone family CF59_RS09465 PF00265 Thymidine kinase CF59_RS09470 PF00465 Iron-containing alcohol dehydrogenase CF59_RS09470 PF00171 Aldehyde dehydrogenase family CF59_RS09475 PF01914 MarC family integral membrane protein CF59_RS09480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF59_RS09485 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS09490 PF12911 N-terminal TM domain of oligopeptide transport permease C CF59_RS09490 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS09495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF59_RS09495 PF00005 ABC transporter CF59_RS09500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF59_RS09500 PF00005 ABC transporter CF59_RS09505 PF01797 Transposase IS200 like CF59_RS09510 PF04269 Protein of unknown function, DUF440 CF59_RS09515 PF13091 PLD-like domain CF59_RS09515 PF13396 Phospholipase_D-nuclease N-terminal CF59_RS09525 PF02254 TrkA-N domain CF59_RS09525 PF07885 Ion channel CF59_RS09530 PF03795 YCII-related domain CF59_RS09535 PF03544 Gram-negative bacterial TonB protein C-terminal CF59_RS09540 PF03061 Thioesterase superfamily CF59_RS09545 PF04279 Intracellular septation protein A CF59_RS09555 PF03922 OmpW family CF59_RS09560 PF05974 Domain of unknown function (DUF892) CF59_RS09570 PF10685 Stress-induced bacterial acidophilic repeat motif CF59_RS09575 PF00290 Tryptophan synthase alpha chain CF59_RS09580 PF00291 Pyridoxal-phosphate dependent enzyme CF59_RS09585 PF00218 Indole-3-glycerol phosphate synthase CF59_RS09585 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CF59_RS09590 PF00117 Glutamine amidotransferase class-I CF59_RS09590 PF02885 Glycosyl transferase family, helical bundle domain CF59_RS09590 PF00591 Glycosyl transferase family, a/b domain CF59_RS09595 PF04715 Anthranilate synthase component I, N terminal region CF59_RS09595 PF00425 chorismate binding enzyme CF59_RS09600 PF02811 PHP domain CF59_RS09605 PF01300 Telomere recombination CF59_RS09615 PF00849 RNA pseudouridylate synthase CF59_RS09615 PF01479 S4 domain CF59_RS09630 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CF59_RS09630 PF12557 Cob(I)alamin adenosyltransferase N terminal CF59_RS09635 PF00106 short chain dehydrogenase CF59_RS09645 PF08496 Peptidase family S49 N-terminal CF59_RS09645 PF01343 Peptidase family S49 CF59_RS09650 PF10692 Protein of unknown function (DUF2498) CF59_RS09660 PF08272 Topoisomerase I zinc-ribbon-like CF59_RS09660 PF01396 Topoisomerase DNA binding C4 zinc finger CF59_RS09660 PF01751 Toprim domain CF59_RS09660 PF01131 DNA topoisomerase CF59_RS09665 PF03466 LysR substrate binding domain CF59_RS09665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS09690 PF00694 Aconitase C-terminal domain CF59_RS09690 PF00330 Aconitase family (aconitate hydratase) CF59_RS09695 PF00925 GTP cyclohydrolase II CF59_RS09700 PF01569 PAP2 superfamily CF59_RS09705 PF06305 Lipopolysaccharide assembly protein A domain CF59_RS09710 PF18073 Rubredoxin metal binding domain CF59_RS09715 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CF59_RS09720 PF01253 Translation initiation factor SUI1 CF59_RS09725 PF05433 Glycine zipper 2TM domain CF59_RS09730 PF00455 DeoR C terminal sensor domain CF59_RS09730 PF08220 DeoR-like helix-turn-helix domain CF59_RS09740 PF00563 EAL domain CF59_RS09740 PF00990 Diguanylate cyclase, GGDEF domain CF59_RS09740 PF13426 PAS domain CF59_RS09750 PF00773 RNB domain CF59_RS09750 PF17876 Cold shock domain CF59_RS09750 PF00575 S1 RNA binding domain CF59_RS09750 PF08206 Ribonuclease B OB domain CF59_RS09765 PF00440 Bacterial regulatory proteins, tetR family CF59_RS09765 PF16295 Tetracyclin repressor-like, C-terminal domain CF59_RS09770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF59_RS09770 PF00529 HlyD membrane-fusion protein of T1SS CF59_RS09775 PF00873 AcrB/AcrD/AcrF family CF59_RS09780 PF02321 Outer membrane efflux protein CF59_RS09785 PF07690 Major Facilitator Superfamily CF59_RS09790 PF00005 ABC transporter CF59_RS09795 PF00005 ABC transporter CF59_RS09795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF59_RS09800 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS09800 PF12911 N-terminal TM domain of oligopeptide transport permease C CF59_RS09805 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS09810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF59_RS09820 PF10820 Protein of unknown function (DUF2543) CF59_RS09825 PF00324 Amino acid permease CF59_RS09830 PF00120 Glutamine synthetase, catalytic domain CF59_RS09835 PF07722 Peptidase C26 CF59_RS09840 PF00171 Aldehyde dehydrogenase family CF59_RS09845 PF01266 FAD dependent oxidoreductase CF59_RS09850 PF00202 Aminotransferase class-III CF59_RS09855 PF02954 Bacterial regulatory protein, Fis family CF59_RS09855 PF00158 Sigma-54 interaction domain CF59_RS09860 PF04012 PspA/IM30 family CF59_RS09865 PF06667 Phage shock protein B CF59_RS09870 PF04024 PspC domain CF59_RS09875 PF09584 Phage shock protein PspD (Phageshock_PspD) CF59_RS09880 PF00581 Rhodanese-like domain CF59_RS09885 PF04317 YcjX-like family, DUF463 CF59_RS09890 PF05128 Domain of unknown function (DUF697) CF59_RS09895 PF18024 Helix-turn-helix domain CF59_RS09895 PF13188 PAS domain CF59_RS09895 PF00158 Sigma-54 interaction domain CF59_RS09900 PF08534 Redoxin CF59_RS09905 PF13378 Enolase C-terminal domain-like CF59_RS09905 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CF59_RS09910 PF00246 Zinc carboxypeptidase CF59_RS09920 PF12146 Serine aminopeptidase, S33 CF59_RS09925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS09925 PF03466 LysR substrate binding domain CF59_RS09935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF59_RS09940 PF00924 Mechanosensitive ion channel CF59_RS09945 PF10749 Protein of unknown function (DUF2534) CF59_RS09950 PF00582 Universal stress protein family CF59_RS09955 PF00027 Cyclic nucleotide-binding domain CF59_RS09955 PF00325 Bacterial regulatory proteins, crp family CF59_RS09960 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CF59_RS09960 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CF59_RS09965 PF03806 AbgT putative transporter family CF59_RS09975 PF01546 Peptidase family M20/M25/M40 CF59_RS09980 PF07687 Peptidase dimerisation domain CF59_RS09980 PF01546 Peptidase family M20/M25/M40 CF59_RS09985 PF03466 LysR substrate binding domain CF59_RS09985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS09995 PF02311 AraC-like ligand binding domain CF59_RS09995 PF12833 Helix-turn-helix domain CF59_RS10000 PF13533 Biotin-lipoyl like CF59_RS10005 PF07690 Major Facilitator Superfamily CF59_RS10010 PF01713 Smr domain CF59_RS10015 PF08448 PAS fold CF59_RS10015 PF00990 Diguanylate cyclase, GGDEF domain CF59_RS10020 PF01544 CorA-like Mg2+ transporter protein CF59_RS10030 PF03880 DbpA RNA binding domain CF59_RS10030 PF00271 Helicase conserved C-terminal domain CF59_RS10030 PF00270 DEAD/DEAH box helicase CF59_RS10035 PF01171 PP-loop family CF59_RS10040 PF12167 Arm DNA-binding domain CF59_RS10040 PF00589 Phage integrase family CF59_RS10045 PF06806 Putative excisionase (DUF1233) CF59_RS10050 PF06688 Protein of unknown function (DUF1187) CF59_RS10065 PF12684 PDDEXK-like domain of unknown function (DUF3799) CF59_RS10065 PF06630 Enterobacterial exodeoxyribonuclease VIII CF59_RS10075 PF04181 Rtr1/RPAP2 family CF59_RS10085 PF14163 Super-infection exclusion protein B CF59_RS10095 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT CF59_RS10100 PF06254 Putative bacterial toxin ydaT CF59_RS10105 PF07120 Protein of unknown function (DUF1376) CF59_RS10110 PF01695 IstB-like ATP binding protein CF59_RS10115 PF07789 Protein of unknown function (DUF1627) CF59_RS10135 PF00145 C-5 cytosine-specific DNA methylase CF59_RS10155 PF07102 Protein of unknown function (DUF1364) CF59_RS10165 PF06519 TolA C-terminal CF59_RS10175 PF04971 Bacteriophage P21 holin S CF59_RS10180 PF00959 Phage lysozyme CF59_RS10185 PF03245 Bacteriophage Rz lysis protein CF59_RS10190 PF02386 Cation transport protein CF59_RS10195 PF02195 ParB-like nuclease domain CF59_RS10275 PF06791 Prophage tail length tape measure protein CF59_RS10310 PF03335 Phage tail fibre repeat CF59_RS10310 PF07484 Phage Tail Collar Domain CF59_RS10310 PF08400 Prophage tail fibre N-terminal CF59_RS10345 PF08400 Prophage tail fibre N-terminal CF59_RS10345 PF07484 Phage Tail Collar Domain CF59_RS10345 PF03335 Phage tail fibre repeat CF59_RS10355 PF07484 Phage Tail Collar Domain CF59_RS10355 PF08400 Prophage tail fibre N-terminal CF59_RS10355 PF03335 Phage tail fibre repeat CF59_RS10360 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CF59_RS10420 PF00436 Single-strand binding protein family CF59_RS10440 PF01385 Probable transposase CF59_RS10440 PF07282 Putative transposase DNA-binding domain CF59_RS10440 PF12323 Helix-turn-helix domain CF59_RS10465 PF12833 Helix-turn-helix domain CF59_RS10470 PF00563 EAL domain CF59_RS10485 PF12706 Beta-lactamase superfamily domain CF59_RS10490 PF12833 Helix-turn-helix domain CF59_RS10490 PF02311 AraC-like ligand binding domain CF59_RS10565 PF12161 HsdM N-terminal domain CF59_RS10565 PF02384 N-6 DNA Methylase CF59_RS10570 PF01420 Type I restriction modification DNA specificity domain CF59_RS10575 PF12008 Type I restriction and modification enzyme - subunit R C terminal CF59_RS10575 PF18766 SWI2/SNF2 ATPase CF59_RS10575 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CF59_RS10605 PF00149 Calcineurin-like phosphoesterase CF59_RS10670 PF03796 DnaB-like helicase C terminal domain CF59_RS10670 PF00772 DnaB-like helicase N terminal domain CF59_RS10705 PF02086 D12 class N6 adenine-specific DNA methyltransferase CF59_RS10710 PF04381 Putative exonuclease, RdgC CF59_RS10745 PF01051 Initiator Replication protein CF59_RS10755 PF13614 AAA domain CF59_RS10755 PF18607 ParA helix turn helix domain CF59_RS10760 PF02195 ParB-like nuclease domain CF59_RS10760 PF08775 ParB family CF59_RS10800 PF13505 Outer membrane protein beta-barrel domain CF59_RS10835 PF06316 Enterobacterial Ail/Lom protein CF59_RS10840 PF07484 Phage Tail Collar Domain CF59_RS10840 PF03335 Phage tail fibre repeat CF59_RS10840 PF08400 Prophage tail fibre N-terminal CF59_RS10860 PF02796 Helix-turn-helix domain of resolvase CF59_RS10860 PF00239 Resolvase, N terminal domain CF59_RS10870 PF00582 Universal stress protein family CF59_RS10875 PF00267 Gram-negative porin CF59_RS10880 PF10371 Domain of unknown function CF59_RS10880 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CF59_RS10880 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CF59_RS10880 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CF59_RS10880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CF59_RS10885 PF03891 Domain of unknown function (DUF333) CF59_RS10890 PF03724 META domain CF59_RS10895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CF59_RS10895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CF59_RS10900 PF11739 Dicarboxylate transport CF59_RS10905 PF13617 YnbE-like lipoprotein CF59_RS10910 PF07027 Protein of unknown function (DUF1318) CF59_RS10915 PF12833 Helix-turn-helix domain CF59_RS10915 PF14525 AraC-binding-like domain CF59_RS10920 PF00171 Aldehyde dehydrogenase family CF59_RS10925 PF01179 Copper amine oxidase, enzyme domain CF59_RS10925 PF02728 Copper amine oxidase, N3 domain CF59_RS10925 PF07833 Copper amine oxidase N-terminal domain CF59_RS10925 PF02727 Copper amine oxidase, N2 domain CF59_RS10930 PF00171 Aldehyde dehydrogenase family CF59_RS10930 PF01575 MaoC like domain CF59_RS10935 PF05138 Phenylacetic acid catabolic protein CF59_RS10940 PF06243 Phenylacetic acid degradation B CF59_RS10945 PF05138 Phenylacetic acid catabolic protein CF59_RS10950 PF01883 Iron-sulfur cluster assembly protein CF59_RS10955 PF00111 2Fe-2S iron-sulfur cluster binding domain CF59_RS10955 PF00970 Oxidoreductase FAD-binding domain CF59_RS10955 PF00175 Oxidoreductase NAD-binding domain CF59_RS10960 PF00378 Enoyl-CoA hydratase/isomerase CF59_RS10965 PF00378 Enoyl-CoA hydratase/isomerase CF59_RS10970 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CF59_RS10970 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CF59_RS10970 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CF59_RS10975 PF03061 Thioesterase superfamily CF59_RS10980 PF00108 Thiolase, N-terminal domain CF59_RS10980 PF02803 Thiolase, C-terminal domain CF59_RS10985 PF14535 AMP-binding enzyme C-terminal domain CF59_RS10985 PF00501 AMP-binding enzyme CF59_RS10990 PF07848 PaaX-like protein CF59_RS10990 PF08223 PaaX-like protein C-terminal domain CF59_RS10995 PF00132 Bacterial transferase hexapeptide (six repeats) CF59_RS11005 PF00248 Aldo/keto reductase family CF59_RS11010 PF02525 Flavodoxin-like fold CF59_RS11015 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CF59_RS11015 PF00270 DEAD/DEAH box helicase CF59_RS11015 PF11898 Domain of unknown function (DUF3418) CF59_RS11015 PF04408 Helicase associated domain (HA2) CF59_RS11015 PF00271 Helicase conserved C-terminal domain CF59_RS11020 PF02698 DUF218 domain CF59_RS11030 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CF59_RS11030 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CF59_RS11035 PF01292 Prokaryotic cytochrome b561 CF59_RS11045 PF01848 Hok/gef family CF59_RS11050 PF13276 HTH-like domain CF59_RS11050 PF13333 Integrase core domain CF59_RS11050 PF00665 Integrase core domain CF59_RS11060 PF00672 HAMP domain CF59_RS11060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CF59_RS11060 PF02203 Tar ligand binding domain homologue CF59_RS11065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS11065 PF03466 LysR substrate binding domain CF59_RS11070 PF07063 Domain of unknown function (DUF1338) CF59_RS11075 PF04349 Periplasmic glucan biosynthesis protein, MdoG CF59_RS11085 PF04325 Protein of unknown function (DUF465) CF59_RS11090 PF13302 Acetyltransferase (GNAT) domain CF59_RS11095 PF18836 Beta solenoid repeat from YDCK CF59_RS11100 PF03595 Voltage-dependent anion channel CF59_RS11105 PF03848 Tellurite resistance protein TehB CF59_RS11110 PF11769 Protein of unknown function (DUF3313) CF59_RS11115 PF03594 Benzoate membrane transport protein CF59_RS11120 PF07883 Cupin domain CF59_RS11120 PF01381 Helix-turn-helix CF59_RS11125 PF12392 Collagenase CF59_RS11125 PF01136 Peptidase family U32 CF59_RS11130 PF10829 Protein of unknown function (DUF2554) CF59_RS11135 PF07927 HicA toxin of bacterial toxin-antitoxin, CF59_RS11140 PF01381 Helix-turn-helix CF59_RS11140 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system CF59_RS11145 PF00392 Bacterial regulatory proteins, gntR family CF59_RS11145 PF00155 Aminotransferase class I and II CF59_RS11150 PF13416 Bacterial extracellular solute-binding protein CF59_RS11155 PF00005 ABC transporter CF59_RS11155 PF08402 TOBE domain CF59_RS11160 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS11165 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS11170 PF00171 Aldehyde dehydrogenase family CF59_RS11180 PF10753 Toxin GhoT_OrtT CF59_RS11185 PF10735 Protein of unknown function (DUF2526) CF59_RS11190 PF04657 Putative inner membrane exporter, YdcZ CF59_RS11195 PF00583 Acetyltransferase (GNAT) family CF59_RS11200 PF16884 N-terminal domain of oxidoreductase CF59_RS11200 PF00107 Zinc-binding dehydrogenase CF59_RS11205 PF07729 FCD domain CF59_RS11205 PF00392 Bacterial regulatory proteins, gntR family CF59_RS11210 PF07715 TonB-dependent Receptor Plug Domain CF59_RS11210 PF00593 TonB dependent receptor CF59_RS11220 PF00324 Amino acid permease CF59_RS11240 PF03527 RHS protein CF59_RS11240 PF05593 RHS Repeat CF59_RS11240 PF14220 Domain of unknown function (DUF4329) CF59_RS11250 PF01609 Transposase DDE domain CF59_RS11250 PF13808 DDE_Tnp_1-associated CF59_RS11255 PF00563 EAL domain CF59_RS11255 PF00990 Diguanylate cyclase, GGDEF domain CF59_RS11255 PF01590 GAF domain CF59_RS11255 PF00360 Phytochrome region CF59_RS11260 PF14864 Alkyl sulfatase C-terminal CF59_RS11260 PF14863 Alkyl sulfatase dimerisation CF59_RS11260 PF00753 Metallo-beta-lactamase superfamily CF59_RS11265 PF01361 Tautomerase enzyme CF59_RS11270 PF01613 Flavin reductase like domain CF59_RS11275 PF00797 N-acetyltransferase CF59_RS11280 PF02567 Phenazine biosynthesis-like protein CF59_RS11285 PF02665 Nitrate reductase gamma subunit CF59_RS11290 PF02613 Nitrate reductase delta subunit CF59_RS11295 PF14711 Respiratory nitrate reductase beta C-terminal CF59_RS11295 PF13247 4Fe-4S dicluster domain CF59_RS11300 PF00384 Molybdopterin oxidoreductase CF59_RS11300 PF01568 Molydopterin dinucleotide binding domain CF59_RS11300 PF14710 Respiratory nitrate reductase alpha N-terminal CF59_RS11305 PF07690 Major Facilitator Superfamily CF59_RS11320 PF00267 Gram-negative porin CF59_RS11325 PF00892 EamA-like transporter family CF59_RS11330 PF00384 Molybdopterin oxidoreductase CF59_RS11330 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF59_RS11330 PF01568 Molydopterin dinucleotide binding domain CF59_RS11335 PF01568 Molydopterin dinucleotide binding domain CF59_RS11335 PF00384 Molybdopterin oxidoreductase CF59_RS11335 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF59_RS11340 PF12800 4Fe-4S binding domain CF59_RS11340 PF13247 4Fe-4S dicluster domain CF59_RS11340 PF09163 Formate dehydrogenase N, transmembrane CF59_RS11345 PF01292 Prokaryotic cytochrome b561 CF59_RS11355 PF01797 Transposase IS200 like CF59_RS11360 PF01381 Helix-turn-helix CF59_RS11365 PF00107 Zinc-binding dehydrogenase CF59_RS11365 PF08240 Alcohol dehydrogenase GroES-like domain CF59_RS11370 PF03949 Malic enzyme, NAD binding domain CF59_RS11370 PF00390 Malic enzyme, N-terminal domain CF59_RS11375 PF08136 30S ribosomal protein subunit S22 family CF59_RS11380 PF10684 Putative biofilm-dependent modulation protein CF59_RS11385 PF02566 OsmC-like protein CF59_RS11390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF59_RS11390 PF00005 ABC transporter CF59_RS11395 PF00005 ABC transporter CF59_RS11395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF59_RS11400 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS11400 PF12911 N-terminal TM domain of oligopeptide transport permease C CF59_RS11405 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS11410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF59_RS11415 PF01427 D-ala-D-ala dipeptidase CF59_RS11420 PF00563 EAL domain CF59_RS11420 PF13426 PAS domain CF59_RS11420 PF00990 Diguanylate cyclase, GGDEF domain CF59_RS11425 PF00990 Diguanylate cyclase, GGDEF domain CF59_RS11430 PF02638 Glycosyl hydrolase-like 10 CF59_RS11435 PF13520 Amino acid permease CF59_RS11440 PF00282 Pyridoxal-dependent decarboxylase conserved domain CF59_RS11450 PF05193 Peptidase M16 inactive domain CF59_RS11450 PF00675 Insulinase (Peptidase family M16) CF59_RS11455 PF07715 TonB-dependent Receptor Plug Domain CF59_RS11460 PF06472 ABC transporter transmembrane region 2 CF59_RS11460 PF00005 ABC transporter CF59_RS11465 PF13186 Iron-sulfur cluster-binding domain CF59_RS11465 PF04055 Radical SAM superfamily CF59_RS11470 PF00884 Sulfatase CF59_RS11475 PF12833 Helix-turn-helix domain CF59_RS11480 PF17073 Two-component-system connector protein CF59_RS11485 PF00384 Molybdopterin oxidoreductase CF59_RS11490 PF09160 FimH, mannose binding CF59_RS11495 PF00419 Fimbrial protein CF59_RS11500 PF00419 Fimbrial protein CF59_RS11505 PF13954 PapC N-terminal domain CF59_RS11505 PF13953 PapC C-terminal domain CF59_RS11505 PF00577 Outer membrane usher protein CF59_RS11510 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF59_RS11510 PF02753 Pili assembly chaperone PapD, C-terminal domain CF59_RS11515 PF00419 Fimbrial protein CF59_RS11535 PF00248 Aldo/keto reductase family CF59_RS11555 PF07804 HipA-like C-terminal domain CF59_RS11555 PF13657 HipA N-terminal domain CF59_RS11560 PF01381 Helix-turn-helix CF59_RS11565 PF13018 Extended Signal Peptide of Type V secretion system CF59_RS11570 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CF59_RS11570 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CF59_RS11575 PF04198 Putative sugar-binding domain CF59_RS11580 PF00005 ABC transporter CF59_RS11585 PF02653 Branched-chain amino acid transport system / permease component CF59_RS11590 PF02653 Branched-chain amino acid transport system / permease component CF59_RS11595 PF13407 Periplasmic binding protein domain CF59_RS11600 PF01791 DeoC/LacD family aldolase CF59_RS11605 PF03992 Antibiotic biosynthesis monooxygenase CF59_RS11610 PF13649 Methyltransferase domain CF59_RS11615 PF01062 Bestrophin, RFP-TM, chloride channel CF59_RS11625 PF01232 Mannitol dehydrogenase Rossmann domain CF59_RS11625 PF08125 Mannitol dehydrogenase C-terminal domain CF59_RS11630 PF00990 Diguanylate cyclase, GGDEF domain CF59_RS11635 PF13811 Domain of unknown function (DUF4186) CF59_RS11640 PF04960 Glutaminase CF59_RS11645 PF00171 Aldehyde dehydrogenase family CF59_RS11650 PF03466 LysR substrate binding domain CF59_RS11650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS11660 PF07690 Major Facilitator Superfamily CF59_RS11665 PF01914 MarC family integral membrane protein CF59_RS11670 PF01047 MarR family CF59_RS11675 PF12833 Helix-turn-helix domain CF59_RS11680 PF13999 MarB protein CF59_RS11685 PF00232 Glycosyl hydrolase family 1 CF59_RS11690 PF11471 Maltoporin periplasmic N-terminal extension CF59_RS11690 PF02264 LamB porin CF59_RS11695 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CF59_RS11700 PF02378 Phosphotransferase system, EIIC CF59_RS11705 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF59_RS11710 PF00392 Bacterial regulatory proteins, gntR family CF59_RS11710 PF07702 UTRA domain CF59_RS11715 PF00892 EamA-like transporter family CF59_RS11720 PF07690 Major Facilitator Superfamily CF59_RS11730 PF00990 Diguanylate cyclase, GGDEF domain CF59_RS11735 PF04076 Bacterial OB fold (BOF) protein CF59_RS11745 PF01432 Peptidase family M3 CF59_RS11750 PF00106 short chain dehydrogenase CF59_RS11755 PF00392 Bacterial regulatory proteins, gntR family CF59_RS11755 PF07729 FCD domain CF59_RS11760 PF14001 YdfZ protein CF59_RS11765 PF08125 Mannitol dehydrogenase C-terminal domain CF59_RS11765 PF01232 Mannitol dehydrogenase Rossmann domain CF59_RS11770 PF00083 Sugar (and other) transporter CF59_RS11770 PF07690 Major Facilitator Superfamily CF59_RS11775 PF08240 Alcohol dehydrogenase GroES-like domain CF59_RS11775 PF00107 Zinc-binding dehydrogenase CF59_RS11780 PF13378 Enolase C-terminal domain-like CF59_RS11780 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CF59_RS11785 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CF59_RS11790 PF06932 Protein of unknown function (DUF1283) CF59_RS11795 PF13302 Acetyltransferase (GNAT) domain CF59_RS11800 PF06788 Uncharacterised protein family (UPF0257) CF59_RS11805 PF06649 Protein of unknown function (DUF1161) CF59_RS11810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF59_RS11810 PF00384 Molybdopterin oxidoreductase CF59_RS11810 PF01568 Molydopterin dinucleotide binding domain CF59_RS11815 PF01568 Molydopterin dinucleotide binding domain CF59_RS11815 PF00384 Molybdopterin oxidoreductase CF59_RS11815 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF59_RS11820 PF13247 4Fe-4S dicluster domain CF59_RS11820 PF12800 4Fe-4S binding domain CF59_RS11825 PF04976 DMSO reductase anchor subunit (DmsC) CF59_RS11830 PF02613 Nitrate reductase delta subunit CF59_RS11835 PF00654 Voltage gated chloride channel CF59_RS11845 PF00480 ROK family CF59_RS11850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS11850 PF03466 LysR substrate binding domain CF59_RS11855 PF07690 Major Facilitator Superfamily CF59_RS11870 PF00089 Trypsin CF59_RS11875 PF00893 Small Multidrug Resistance protein CF59_RS11880 PF00893 Small Multidrug Resistance protein CF59_RS11885 PF01594 AI-2E family transporter CF59_RS11890 PF02233 NAD(P) transhydrogenase beta subunit CF59_RS11895 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CF59_RS11895 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CF59_RS11895 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CF59_RS11900 PF07338 Protein of unknown function (DUF1471) CF59_RS11905 PF13520 Amino acid permease CF59_RS11915 PF06942 GlpM protein CF59_RS11920 PF00486 Transcriptional regulatory protein, C terminal CF59_RS11920 PF00072 Response regulator receiver domain CF59_RS11925 PF00672 HAMP domain CF59_RS11925 PF00512 His Kinase A (phospho-acceptor) domain CF59_RS11925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS11930 PF05472 DNA replication terminus site-binding protein (Ter protein) CF59_RS11935 PF00206 Lyase CF59_RS11935 PF10415 Fumarase C C-terminus CF59_RS11940 PF05681 Fumarate hydratase (Fumerase) CF59_RS11940 PF05683 Fumarase C-terminus CF59_RS11945 PF01238 Phosphomannose isomerase type I CF59_RS11950 PF06097 Bacterial protein of unknown function (DUF945) CF59_RS11955 PF03573 outer membrane porin, OprD family CF59_RS11965 PF02837 Glycosyl hydrolases family 2, sugar binding domain CF59_RS11965 PF00703 Glycosyl hydrolases family 2 CF59_RS11965 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CF59_RS11970 PF00440 Bacterial regulatory proteins, tetR family CF59_RS11980 PF00356 Bacterial regulatory proteins, lacI family CF59_RS11980 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CF59_RS11985 PF02378 Phosphotransferase system, EIIC CF59_RS11985 PF00367 phosphotransferase system, EIIB CF59_RS11990 PF00155 Aminotransferase class I and II CF59_RS11995 PF00962 Adenosine/AMP deaminase CF59_RS12000 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CF59_RS12000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CF59_RS12010 PF05321 Haemolysin expression modulating protein CF59_RS12015 PF10754 Protein of unknown function (DUF2569) CF59_RS12020 PF02508 Rnf-Nqr subunit, membrane protein CF59_RS12025 PF04060 Putative Fe-S cluster CF59_RS12030 PF12838 4Fe-4S dicluster domain CF59_RS12030 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CF59_RS12030 PF10531 SLBB domain CF59_RS12030 PF13375 RnfC Barrel sandwich hybrid domain CF59_RS12035 PF03116 NQR2, RnfD, RnfE family CF59_RS12040 PF04205 FMN-binding domain CF59_RS12045 PF02508 Rnf-Nqr subunit, membrane protein CF59_RS12050 PF00633 Helix-hairpin-helix motif CF59_RS12050 PF10576 Iron-sulfur binding domain of endonuclease III CF59_RS12050 PF00730 HhH-GPD superfamily base excision DNA repair protein CF59_RS12060 PF00854 POT family CF59_RS12065 PF02798 Glutathione S-transferase, N-terminal domain CF59_RS12065 PF00043 Glutathione S-transferase, C-terminal domain CF59_RS12070 PF08543 Phosphomethylpyrimidine kinase CF59_RS12075 PF01479 S4 domain CF59_RS12075 PF00579 tRNA synthetases class I (W and Y) CF59_RS12080 PF01243 Pyridoxamine 5'-phosphate oxidase CF59_RS12080 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CF59_RS12085 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CF59_RS12090 PF03702 Anhydro-N-acetylmuramic acid kinase CF59_RS12095 PF05433 Glycine zipper 2TM domain CF59_RS12100 PF01047 MarR family CF59_RS12105 PF07869 Protein of unknown function (DUF1656) CF59_RS12110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF59_RS12110 PF00529 HlyD membrane-fusion protein of T1SS CF59_RS12115 PF04632 Fusaric acid resistance protein family CF59_RS12120 PF00080 Copper/zinc superoxide dismutase (SODC) CF59_RS12125 PF00248 Aldo/keto reductase family CF59_RS12130 PF06945 Protein of unknown function (DUF1289) CF59_RS12135 PF00440 Bacterial regulatory proteins, tetR family CF59_RS12135 PF16925 Tetracyclin repressor-like, C-terminal domain CF59_RS12140 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CF59_RS12145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CF59_RS12150 PF00929 Exonuclease CF59_RS12155 PF08494 DEAD/H associated CF59_RS12155 PF00271 Helicase conserved C-terminal domain CF59_RS12155 PF00270 DEAD/DEAH box helicase CF59_RS12160 PF00462 Glutaredoxin CF59_RS12165 PF00877 NlpC/P60 family CF59_RS12170 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CF59_RS12170 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CF59_RS12175 PF07690 Major Facilitator Superfamily CF59_RS12185 PF00356 Bacterial regulatory proteins, lacI family CF59_RS12190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS12190 PF03466 LysR substrate binding domain CF59_RS12195 PF07690 Major Facilitator Superfamily CF59_RS12205 PF00677 Lumazine binding domain CF59_RS12210 PF01554 MatE CF59_RS12215 PF16168 Adhesin of bacterial autotransporter system, probable stalk CF59_RS12215 PF03212 Pertactin CF59_RS12230 PF08803 Putative mono-oxygenase ydhR CF59_RS12235 PF13454 FAD-NAD(P)-binding CF59_RS12245 PF01292 Prokaryotic cytochrome b561 CF59_RS12250 PF13247 4Fe-4S dicluster domain CF59_RS12260 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain CF59_RS12260 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 CF59_RS12265 PF12800 4Fe-4S binding domain CF59_RS12265 PF13247 4Fe-4S dicluster domain CF59_RS12270 PF10965 Protein of unknown function (DUF2767) CF59_RS12275 PF02887 Pyruvate kinase, alpha/beta domain CF59_RS12275 PF00224 Pyruvate kinase, barrel domain CF59_RS12280 PF04728 Lipoprotein leucine-zipper CF59_RS12285 PF03734 L,D-transpeptidase catalytic domain CF59_RS12285 PF17969 L,D-transpeptidase C-terminal domain CF59_RS12285 PF01476 LysM domain CF59_RS12290 PF02657 Fe-S metabolism associated domain CF59_RS12295 PF00266 Aminotransferase class-V CF59_RS12300 PF01458 Uncharacterized protein family (UPF0051) CF59_RS12305 PF00005 ABC transporter CF59_RS12310 PF01458 Uncharacterized protein family (UPF0051) CF59_RS12315 PF01521 Iron-sulphur cluster biosynthesis CF59_RS12320 PF15930 Domain of unknown function CF59_RS12325 PF03061 Thioesterase superfamily CF59_RS12330 PF02913 FAD linked oxidases, C-terminal domain CF59_RS12330 PF13183 4Fe-4S dicluster domain CF59_RS12330 PF01565 FAD binding domain CF59_RS12335 PF01594 AI-2E family transporter CF59_RS12340 PF08965 Domain of unknown function (DUF1870) CF59_RS12345 PF07690 Major Facilitator Superfamily CF59_RS12350 PF07690 Major Facilitator Superfamily CF59_RS12355 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CF59_RS12355 PF08501 Shikimate dehydrogenase substrate binding domain CF59_RS12360 PF01487 Type I 3-dehydroquinase CF59_RS12365 PF01144 Coenzyme A transferase CF59_RS12370 PF02770 Acyl-CoA dehydrogenase, middle domain CF59_RS12370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CF59_RS12370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CF59_RS12375 PF12833 Helix-turn-helix domain CF59_RS12375 PF02311 AraC-like ligand binding domain CF59_RS12385 PF01012 Electron transfer flavoprotein domain CF59_RS12390 PF00766 Electron transfer flavoprotein FAD-binding domain CF59_RS12390 PF01012 Electron transfer flavoprotein domain CF59_RS12395 PF01494 FAD binding domain CF59_RS12405 PF00501 AMP-binding enzyme CF59_RS12405 PF13193 AMP-binding enzyme C-terminal domain CF59_RS12410 PF00391 PEP-utilising enzyme, mobile domain CF59_RS12410 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CF59_RS12410 PF02896 PEP-utilising enzyme, TIM barrel domain CF59_RS12420 PF03618 Kinase/pyrophosphorylase CF59_RS12425 PF00793 DAHP synthetase I family CF59_RS12430 PF10636 Hemin uptake protein hemP CF59_RS12435 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CF59_RS12440 PF00563 EAL domain CF59_RS12445 PF00877 NlpC/P60 family CF59_RS12450 PF00005 ABC transporter CF59_RS12455 PF00255 Glutathione peroxidase CF59_RS12460 PF01032 FecCD transport family CF59_RS12465 PF00216 Bacterial DNA-binding protein CF59_RS12470 PF03483 B3/4 domain CF59_RS12470 PF03484 tRNA synthetase B5 domain CF59_RS12470 PF03147 Ferredoxin-fold anticodon binding domain CF59_RS12470 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CF59_RS12470 PF01588 Putative tRNA binding domain CF59_RS12475 PF01409 tRNA synthetases class II core domain (F) CF59_RS12475 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CF59_RS12480 PF00453 Ribosomal protein L20 CF59_RS12485 PF01632 Ribosomal protein L35 CF59_RS12490 PF00707 Translation initiation factor IF-3, C-terminal domain CF59_RS12490 PF05198 Translation initiation factor IF-3, N-terminal domain CF59_RS12495 PF02824 TGS domain CF59_RS12495 PF03129 Anticodon binding domain CF59_RS12495 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CF59_RS12495 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CF59_RS12510 PF04338 Protein of unknown function, DUF481 CF59_RS12515 PF00294 pfkB family carbohydrate kinase CF59_RS12520 PF11080 Endoribonuclease GhoS CF59_RS12525 PF03881 Fructosamine kinase CF59_RS12530 PF14002 YniB-like protein CF59_RS12535 PF13419 Haloacid dehalogenase-like hydrolase CF59_RS12540 PF04307 LexA-binding, inner membrane-associated putative hydrolase CF59_RS12545 PF00375 Sodium:dicarboxylate symporter family CF59_RS12555 PF10729 Cell division activator CedA CF59_RS12560 PF06628 Catalase-related immune-responsive CF59_RS12560 PF00199 Catalase CF59_RS12560 PF18011 C-terminal domain found in long catalases CF59_RS12565 PF04794 YdjC-like protein CF59_RS12570 PF11975 Family 4 glycosyl hydrolase C-terminal domain CF59_RS12570 PF02056 Family 4 glycosyl hydrolase CF59_RS12575 PF12833 Helix-turn-helix domain CF59_RS12575 PF07883 Cupin domain CF59_RS12580 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CF59_RS12585 PF02378 Phosphotransferase system, EIIC CF59_RS12590 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF59_RS12595 PF04355 SmpA / OmlA family CF59_RS12600 PF02540 NAD synthase CF59_RS12615 PF05962 HutD CF59_RS12620 PF07813 LTXXQ motif family protein CF59_RS12625 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CF59_RS12630 PF04996 Succinylarginine dihydrolase CF59_RS12635 PF00171 Aldehyde dehydrogenase family CF59_RS12640 PF04958 Arginine N-succinyltransferase beta subunit CF59_RS12645 PF00202 Aminotransferase class-III CF59_RS12650 PF03372 Endonuclease/Exonuclease/phosphatase family CF59_RS12655 PF09335 SNARE associated Golgi protein CF59_RS12665 PF09335 SNARE associated Golgi protein CF59_RS12670 PF02627 Carboxymuconolactone decarboxylase family CF59_RS12675 PF13416 Bacterial extracellular solute-binding protein CF59_RS12680 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS12685 PF00005 ABC transporter CF59_RS12690 PF00581 Rhodanese-like domain CF59_RS12695 PF01066 CDP-alcohol phosphatidyltransferase CF59_RS12700 PF00293 NUDIX domain CF59_RS12705 PF07383 Protein of unknown function (DUF1496) CF59_RS12710 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CF59_RS12710 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CF59_RS12715 PF06889 Protein of unknown function (DUF1266) CF59_RS12720 PF01751 Toprim domain CF59_RS12720 PF01131 DNA topoisomerase CF59_RS12725 PF02769 AIR synthase related protein, C-terminal domain CF59_RS12725 PF00586 AIR synthase related protein, N-terminal domain CF59_RS12735 PF00881 Nitroreductase family CF59_RS12745 PF01343 Peptidase family S49 CF59_RS12750 PF17763 Glutaminase/Asparaginase C-terminal domain CF59_RS12750 PF00710 Asparaginase, N-terminal CF59_RS12755 PF00857 Isochorismatase family CF59_RS12760 PF00083 Sugar (and other) transporter CF59_RS12765 PF00455 DeoR C terminal sensor domain CF59_RS12765 PF08220 DeoR-like helix-turn-helix domain CF59_RS12770 PF00248 Aldo/keto reductase family CF59_RS12775 PF00294 pfkB family carbohydrate kinase CF59_RS12780 PF01116 Fructose-bisphosphate aldolase class-II CF59_RS12785 PF00107 Zinc-binding dehydrogenase CF59_RS12785 PF08240 Alcohol dehydrogenase GroES-like domain CF59_RS12790 PF00083 Sugar (and other) transporter CF59_RS12795 PF08240 Alcohol dehydrogenase GroES-like domain CF59_RS12795 PF00107 Zinc-binding dehydrogenase CF59_RS12800 PF07023 Protein of unknown function (DUF1315) CF59_RS12805 PF01641 SelR domain CF59_RS12810 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CF59_RS12810 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CF59_RS12815 PF01263 Aldose 1-epimerase CF59_RS12820 PF00248 Aldo/keto reductase family CF59_RS12825 PF06629 MltA-interacting protein MipA CF59_RS12830 PF08298 PrkA AAA domain CF59_RS12830 PF06798 PrkA serine protein kinase C-terminal domain CF59_RS12835 PF04285 Protein of unknown function (DUF444) CF59_RS12840 PF17158 Membrane-associated sensor, integral membrane domain CF59_RS12840 PF00990 Diguanylate cyclase, GGDEF domain CF59_RS12845 PF00990 Diguanylate cyclase, GGDEF domain CF59_RS12845 PF17155 Gammaproteobacterial periplasmic sensor domain CF59_RS12850 PF04073 Aminoacyl-tRNA editing domain CF59_RS12860 PF04284 Protein of unknown function (DUF441) CF59_RS12865 PF12833 Helix-turn-helix domain CF59_RS12865 PF02311 AraC-like ligand binding domain CF59_RS12870 PF07690 Major Facilitator Superfamily CF59_RS12875 PF04343 Protein of unknown function, DUF488 CF59_RS12880 PF03891 Domain of unknown function (DUF333) CF59_RS12885 PF00990 Diguanylate cyclase, GGDEF domain CF59_RS12885 PF13185 GAF domain CF59_RS12895 PF04226 Transglycosylase associated protein CF59_RS12900 PF08956 Domain of unknown function (DUF1869) CF59_RS12905 PF09313 Domain of unknown function (DUF1971) CF59_RS12910 PF01810 LysE type translocator CF59_RS12920 PF00180 Isocitrate/isopropylmalate dehydrogenase CF59_RS12925 PF02028 BCCT, betaine/carnitine/choline family transporter CF59_RS12930 PF00355 Rieske [2Fe-2S] domain CF59_RS12930 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CF59_RS12935 PF00970 Oxidoreductase FAD-binding domain CF59_RS12935 PF00111 2Fe-2S iron-sulfur cluster binding domain CF59_RS12935 PF00175 Oxidoreductase NAD-binding domain CF59_RS12940 PF01612 3'-5' exonuclease CF59_RS12940 PF00570 HRDC domain CF59_RS12945 PF00501 AMP-binding enzyme CF59_RS12945 PF13193 AMP-binding enzyme C-terminal domain CF59_RS12950 PF03843 Outer membrane lipoprotein Slp family CF59_RS12955 PF00814 Glycoprotease family CF59_RS12960 PF04851 Type III restriction enzyme, res subunit CF59_RS12960 PF13307 Helicase C-terminal domain CF59_RS12965 PF01042 Endoribonuclease L-PSP CF59_RS12975 PF08986 Domain of unknown function (DUF1889) CF59_RS12980 PF03701 Uncharacterised protein family (UPF0181) CF59_RS12985 PF00425 chorismate binding enzyme CF59_RS12985 PF04715 Anthranilate synthase component I, N terminal region CF59_RS12990 PF00293 NUDIX domain CF59_RS12995 PF03313 Serine dehydratase alpha chain CF59_RS12995 PF03315 Serine dehydratase beta chain CF59_RS13000 PF12792 CSS motif domain associated with EAL CF59_RS13000 PF00563 EAL domain CF59_RS13005 PF03741 Integral membrane protein TerC family CF59_RS13005 PF03471 Transporter associated domain CF59_RS13015 PF03610 PTS system fructose IIA component CF59_RS13015 PF03830 PTS system sorbose subfamily IIB component CF59_RS13020 PF03609 PTS system sorbose-specific iic component CF59_RS13025 PF03613 PTS system mannose/fructose/sorbose family IID component CF59_RS13030 PF06173 Protein of unknown function (DUF986) CF59_RS13040 PF02659 Putative manganese efflux pump CF59_RS13045 PF13847 Methyltransferase domain CF59_RS13050 PF00313 'Cold-shock' DNA-binding domain CF59_RS13055 PF10736 Protein of unknown function (DUF2627) CF59_RS13065 PF13974 YebO-like protein CF59_RS13070 PF13998 MgrB protein CF59_RS13075 PF13996 YobH-like protein CF59_RS13080 PF01614 Bacterial transcriptional regulator CF59_RS13080 PF09339 IclR helix-turn-helix domain CF59_RS13085 PF07690 Major Facilitator Superfamily CF59_RS13090 PF01435 Peptidase family M48 CF59_RS13095 PF00595 PDZ domain CF59_RS13095 PF11818 C-terminal domain of tail specific protease (DUF3340) CF59_RS13095 PF03572 Peptidase family S41 CF59_RS13095 PF17804 Tail specific protease N-terminal domain CF59_RS13100 PF17516 ProQ C-terminal domain CF59_RS13100 PF04352 ProQ/FINO family CF59_RS13105 PF13185 GAF domain CF59_RS13110 PF04403 Paraquat-inducible protein A CF59_RS13115 PF02470 MlaD protein CF59_RS13120 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CF59_RS13120 PF01189 16S rRNA methyltransferase RsmB/F CF59_RS13120 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CF59_RS13125 PF07351 Protein of unknown function (DUF1480) CF59_RS13130 PF07358 Protein of unknown function (DUF1482) CF59_RS13135 PF00149 Calcineurin-like phosphoesterase CF59_RS13145 PF10709 Protein of unknown function (DUF2511) CF59_RS13150 PF05425 Copper resistance protein D CF59_RS13155 PF04234 CopC domain CF59_RS13160 PF06440 DNA polymerase III, theta subunit CF59_RS13165 PF00795 Carbon-nitrogen hydrolase CF59_RS13170 PF00929 Exonuclease CF59_RS13175 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CF59_RS13175 PF00326 Prolyl oligopeptidase family CF59_RS13185 PF12323 Helix-turn-helix domain CF59_RS13190 PF04391 Protein of unknown function (DUF533) CF59_RS13200 PF13995 YebF-like protein CF59_RS13205 PF07130 YebG protein CF59_RS13210 PF02222 ATP-grasp domain CF59_RS13215 PF01081 KDPG and KHG aldolase CF59_RS13220 PF00920 Dehydratase family CF59_RS13225 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CF59_RS13225 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CF59_RS13235 PF01380 SIS domain CF59_RS13235 PF01418 Helix-turn-helix domain, rpiR family CF59_RS13240 PF02887 Pyruvate kinase, alpha/beta domain CF59_RS13240 PF00224 Pyruvate kinase, barrel domain CF59_RS13245 PF01797 Transposase IS200 like CF59_RS13250 PF03279 Bacterial lipid A biosynthesis acyltransferase CF59_RS13255 PF01551 Peptidase family M23 CF59_RS13255 PF08525 Opacity-associated protein A N-terminal motif CF59_RS13255 PF01476 LysM domain CF59_RS13260 PF01297 Zinc-uptake complex component A periplasmic CF59_RS13265 PF00005 ABC transporter CF59_RS13270 PF00950 ABC 3 transport family CF59_RS13275 PF05491 RuvB C-terminal winged helix domain CF59_RS13275 PF05496 Holliday junction DNA helicase RuvB P-loop domain CF59_RS13275 PF17864 RuvB AAA lid domain CF59_RS13280 PF07499 RuvA, C-terminal domain CF59_RS13280 PF01330 RuvA N terminal domain CF59_RS13285 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CF59_RS13290 PF02075 Crossover junction endodeoxyribonuclease RuvC CF59_RS13295 PF01709 Transcriptional regulator CF59_RS13300 PF00293 NUDIX domain CF59_RS13305 PF01336 OB-fold nucleic acid binding domain CF59_RS13305 PF00152 tRNA synthetases class II (D, K and N) CF59_RS13305 PF02938 GAD domain CF59_RS13310 PF00857 Isochorismatase family CF59_RS13315 PF01904 Protein of unknown function DUF72 CF59_RS13320 PF01124 MAPEG family CF59_RS13325 PF13649 Methyltransferase domain CF59_RS13330 PF08003 Protein of unknown function (DUF1698) CF59_RS13335 PF00384 Molybdopterin oxidoreductase CF59_RS13335 PF01568 Molydopterin dinucleotide binding domain CF59_RS13335 PF18364 Molybdopterin oxidoreductase N-terminal domain CF59_RS13340 PF03264 NapC/NirT cytochrome c family, N-terminal region CF59_RS13345 PF03932 CutC family CF59_RS13350 PF06185 YecM protein CF59_RS13355 PF03485 Arginyl tRNA synthetase N terminal domain CF59_RS13355 PF05746 DALR anticodon binding domain CF59_RS13355 PF00750 tRNA synthetases class I (R) CF59_RS13360 PF06366 Flagellar protein FlhE CF59_RS13365 PF00771 FHIPEP family CF59_RS13380 PF00072 Response regulator receiver domain CF59_RS13380 PF01339 CheB methylesterase CF59_RS13385 PF03705 CheR methyltransferase, all-alpha domain CF59_RS13385 PF01739 CheR methyltransferase, SAM binding domain CF59_RS13390 PF02203 Tar ligand binding domain homologue CF59_RS13390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CF59_RS13390 PF00672 HAMP domain CF59_RS13395 PF02203 Tar ligand binding domain homologue CF59_RS13395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CF59_RS13395 PF00672 HAMP domain CF59_RS13400 PF01584 CheW-like domain CF59_RS13405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS13405 PF09078 CheY binding CF59_RS13405 PF01584 CheW-like domain CF59_RS13405 PF01627 Hpt domain CF59_RS13405 PF02895 Signal transducing histidine kinase, homodimeric domain CF59_RS13410 PF13677 Membrane MotB of proton-channel complex MotA/MotB CF59_RS13410 PF00691 OmpA family CF59_RS13415 PF01618 MotA/TolQ/ExbB proton channel family CF59_RS13420 PF05280 Flagellar transcriptional activator (FlhC) CF59_RS13425 PF05247 Flagellar transcriptional activator (FlhD) CF59_RS13430 PF00582 Universal stress protein family CF59_RS13435 PF00982 Glycosyltransferase family 20 CF59_RS13440 PF02358 Trehalose-phosphatase CF59_RS13445 PF02653 Branched-chain amino acid transport system / permease component CF59_RS13450 PF00005 ABC transporter CF59_RS13455 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CF59_RS13460 PF00210 Ferritin-like domain CF59_RS13465 PF10964 Protein of unknown function (DUF2766) CF59_RS13475 PF13992 YecR-like lipoprotein CF59_RS13480 PF00210 Ferritin-like domain CF59_RS13485 PF10678 Protein of unknown function (DUF2492) CF59_RS13490 PF03222 Tryptophan/tyrosine permease family CF59_RS13495 PF02810 SEC-C motif CF59_RS13495 PF03695 Uncharacterised protein family (UPF0149) CF59_RS13515 PF01066 CDP-alcohol phosphatidyltransferase CF59_RS13520 PF08459 UvrC Helix-hairpin-helix N-terminal CF59_RS13520 PF02151 UvrB/uvrC motif CF59_RS13520 PF01541 GIY-YIG catalytic domain CF59_RS13525 PF00196 Bacterial regulatory proteins, luxR family CF59_RS13525 PF00072 Response regulator receiver domain CF59_RS13535 PF10769 Protein of unknown function (DUF2594) CF59_RS13540 PF00196 Bacterial regulatory proteins, luxR family CF59_RS13540 PF03472 Autoinducer binding domain CF59_RS13545 PF00005 ABC transporter CF59_RS13550 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS13555 PF00291 Pyridoxal-phosphate dependent enzyme CF59_RS13560 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF59_RS13565 PF02899 Phage integrase, N-terminal SAM-like domain CF59_RS13570 PF04545 Sigma-70, region 4 CF59_RS13570 PF04542 Sigma-70 region 2 CF59_RS13570 PF04539 Sigma-70 region 3 CF59_RS13575 PF00700 Bacterial flagellin C-terminal helical region CF59_RS13575 PF00669 Bacterial flagellin N-terminal helical region CF59_RS13575 PF12445 Flagellin protein CF59_RS13580 PF02465 Flagellar hook-associated protein 2 N-terminus CF59_RS13580 PF07195 Flagellar hook-associated protein 2 C-terminus CF59_RS13585 PF02561 Flagellar protein FliS CF59_RS13590 PF05400 Flagellar protein FliT CF59_RS13595 PF02806 Alpha amylase, C-terminal all-beta domain CF59_RS13595 PF00128 Alpha amylase, catalytic domain CF59_RS13600 PF13987 YedD-like protein CF59_RS13605 PF04143 Sulphur transport CF59_RS13610 PF01206 Sulfurtransferase TusA CF59_RS13615 PF02586 SOS response associated peptidase (SRAP) CF59_RS13620 PF00583 Acetyltransferase (GNAT) family CF59_RS13630 PF17607 Family of unknown function (DUF5503) CF59_RS13640 PF02049 Flagellar hook-basal body complex protein FliE CF59_RS13645 PF08345 Flagellar M-ring protein C-terminal CF59_RS13645 PF01514 Secretory protein of YscJ/FliF family CF59_RS13650 PF14841 FliG middle domain CF59_RS13650 PF01706 FliG C-terminal domain CF59_RS13650 PF14842 FliG N-terminal domain CF59_RS13655 PF02108 Flagellar assembly protein FliH CF59_RS13660 PF18269 T3SS EscN ATPase C-terminal domain CF59_RS13660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CF59_RS13665 PF02050 Flagellar FliJ protein CF59_RS13670 PF02120 Flagellar hook-length control protein FliK CF59_RS13675 PF03748 Flagellar basal body-associated protein FliL CF59_RS13685 PF16973 Flagellar motor switch protein FliN N-terminal CF59_RS13685 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CF59_RS13690 PF04347 Flagellar biosynthesis protein, FliO CF59_RS13695 PF00813 FliP family CF59_RS13700 PF01313 Bacterial export proteins, family 3 CF59_RS13705 PF01311 Bacterial export proteins, family 1 CF59_RS13710 PF00196 Bacterial regulatory proteins, luxR family CF59_RS13715 PF10781 Dextransucrase DSRB CF59_RS13720 PF10733 Protein of unknown function (DUF2525) CF59_RS13730 PF00990 Diguanylate cyclase, GGDEF domain CF59_RS13730 PF17151 Periplasmic sensor domain CF59_RS13735 PF09926 Uncharacterized small protein (DUF2158) CF59_RS13740 PF05661 Protein of unknown function (DUF808) CF59_RS13745 PF00892 EamA-like transporter family CF59_RS13750 PF03852 DNA mismatch endonuclease Vsr CF59_RS13755 PF18284 DNA methylase N-terminal domain CF59_RS13755 PF00145 C-5 cytosine-specific DNA methylase CF59_RS13760 PF01966 HD domain CF59_RS13770 PF00267 Gram-negative porin CF59_RS13785 PF00512 His Kinase A (phospho-acceptor) domain CF59_RS13785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS13790 PF00072 Response regulator receiver domain CF59_RS13790 PF00486 Transcriptional regulatory protein, C terminal CF59_RS13795 PF00576 HIUase/Transthyretin family CF59_RS13800 PF00174 Oxidoreductase molybdopterin binding domain CF59_RS13805 PF01794 Ferric reductase like transmembrane component CF59_RS13810 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CF59_RS13825 PF06167 Glucose-regulated metallo-peptidase M90 CF59_RS13835 PF02369 Bacterial Ig-like domain (group 1) CF59_RS13835 PF11924 Inverse autotransporter, beta-domain CF59_RS13835 PF09134 Invasin, domain 3 CF59_RS13845 PF07690 Major Facilitator Superfamily CF59_RS13845 PF00083 Sugar (and other) transporter CF59_RS13850 PF01048 Phosphorylase superfamily CF59_RS13850 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CF59_RS13855 PF01709 Transcriptional regulator CF59_RS13865 PF14220 Domain of unknown function (DUF4329) CF59_RS13865 PF03527 RHS protein CF59_RS13865 PF05593 RHS Repeat CF59_RS13875 PF13693 Winged helix-turn-helix DNA-binding CF59_RS13900 PF01554 MatE CF59_RS13910 PF03466 LysR substrate binding domain CF59_RS13910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS13915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS13915 PF03466 LysR substrate binding domain CF59_RS13925 PF03734 L,D-transpeptidase catalytic domain CF59_RS13925 PF17969 L,D-transpeptidase C-terminal domain CF59_RS13930 PF02277 Phosphoribosyltransferase CF59_RS13935 PF02654 Cobalamin-5-phosphate synthase CF59_RS13940 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CF59_RS13955 PF04363 Protein of unknown function (DUF496) CF59_RS13960 PF04632 Fusaric acid resistance protein family CF59_RS13965 PF06445 GyrI-like small molecule binding domain CF59_RS13970 PF00768 D-alanyl-D-alanine carboxypeptidase CF59_RS13970 PF07943 Penicillin-binding protein 5, C-terminal domain CF59_RS13975 PF00929 Exonuclease CF59_RS13975 PF08411 Exonuclease C-terminal CF59_RS13980 PF13520 Amino acid permease CF59_RS13985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS13985 PF03466 LysR substrate binding domain CF59_RS13990 PF01370 NAD dependent epimerase/dehydratase family CF59_RS13995 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system CF59_RS14000 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CF59_RS14005 PF01634 ATP phosphoribosyltransferase CF59_RS14005 PF08029 HisG, C-terminal domain CF59_RS14010 PF00815 Histidinol dehydrogenase CF59_RS14015 PF00155 Aminotransferase class I and II CF59_RS14020 PF00475 Imidazoleglycerol-phosphate dehydratase CF59_RS14020 PF08645 Polynucleotide kinase 3 phosphatase CF59_RS14025 PF00117 Glutamine amidotransferase class-I CF59_RS14030 PF00977 Histidine biosynthesis protein CF59_RS14035 PF00977 Histidine biosynthesis protein CF59_RS14040 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CF59_RS14040 PF01502 Phosphoribosyl-AMP cyclohydrolase CF59_RS14045 PF01797 Transposase IS200 like CF59_RS14050 PF02706 Chain length determinant protein CF59_RS14055 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CF59_RS14055 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CF59_RS14055 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CF59_RS14060 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CF59_RS14060 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CF59_RS14065 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CF59_RS14065 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CF59_RS14065 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CF59_RS14065 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CF59_RS14070 PF00535 Glycosyl transferase family 2 CF59_RS14075 PF00483 Nucleotidyl transferase CF59_RS14075 PF01050 Mannose-6-phosphate isomerase CF59_RS14080 PF00293 NUDIX domain CF59_RS14085 PF01370 NAD dependent epimerase/dehydratase family CF59_RS14090 PF16363 GDP-mannose 4,6 dehydratase CF59_RS14110 PF01943 Polysaccharide biosynthesis protein CF59_RS14115 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CF59_RS14120 PF00483 Nucleotidyl transferase CF59_RS14125 PF04321 RmlD substrate binding domain CF59_RS14130 PF16363 GDP-mannose 4,6 dehydratase CF59_RS14135 PF00483 Nucleotidyl transferase CF59_RS14145 PF00534 Glycosyl transferases group 1 CF59_RS14145 PF13439 Glycosyltransferase Family 4 CF59_RS14150 PF04230 Polysaccharide pyruvyl transferase CF59_RS14160 PF02397 Bacterial sugar transferase CF59_RS14165 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CF59_RS14165 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CF59_RS14165 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CF59_RS14165 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CF59_RS14170 PF01050 Mannose-6-phosphate isomerase CF59_RS14170 PF00483 Nucleotidyl transferase CF59_RS14175 PF00534 Glycosyl transferases group 1 CF59_RS14175 PF13579 Glycosyl transferase 4-like domain CF59_RS14180 PF00293 NUDIX domain CF59_RS14185 PF01370 NAD dependent epimerase/dehydratase family CF59_RS14190 PF16363 GDP-mannose 4,6 dehydratase CF59_RS14195 PF00132 Bacterial transferase hexapeptide (six repeats) CF59_RS14200 PF00535 Glycosyl transferase family 2 CF59_RS14210 PF13439 Glycosyltransferase Family 4 CF59_RS14210 PF00534 Glycosyl transferases group 1 CF59_RS14215 PF00132 Bacterial transferase hexapeptide (six repeats) CF59_RS14220 PF00535 Glycosyl transferase family 2 CF59_RS14225 PF13807 G-rich domain on putative tyrosine kinase CF59_RS14225 PF02706 Chain length determinant protein CF59_RS14225 PF13614 AAA domain CF59_RS14230 PF01451 Low molecular weight phosphotyrosine protein phosphatase CF59_RS14235 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CF59_RS14235 PF10531 SLBB domain CF59_RS14235 PF02563 Polysaccharide biosynthesis/export protein CF59_RS14240 PF03471 Transporter associated domain CF59_RS14240 PF00571 CBS domain CF59_RS14240 PF03741 Integral membrane protein TerC family CF59_RS14245 PF05170 AsmA family CF59_RS14250 PF00692 dUTPase CF59_RS14255 PF00485 Phosphoribulokinase / Uridine kinase family CF59_RS14260 PF00990 Diguanylate cyclase, GGDEF domain CF59_RS14260 PF05231 MASE1 CF59_RS14260 PF08447 PAS fold CF59_RS14260 PF08448 PAS fold CF59_RS14260 PF00563 EAL domain CF59_RS14260 PF13426 PAS domain CF59_RS14265 PF00730 HhH-GPD superfamily base excision DNA repair protein CF59_RS14265 PF06029 AlkA N-terminal domain CF59_RS14270 PF00012 Hsp70 protein CF59_RS14285 PF00092 von Willebrand factor type A domain CF59_RS14290 PF13533 Biotin-lipoyl like CF59_RS14295 PF00873 AcrB/AcrD/AcrF family CF59_RS14300 PF00873 AcrB/AcrD/AcrF family CF59_RS14305 PF07690 Major Facilitator Superfamily CF59_RS14310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS14310 PF00672 HAMP domain CF59_RS14310 PF00512 His Kinase A (phospho-acceptor) domain CF59_RS14315 PF00486 Transcriptional regulatory protein, C terminal CF59_RS14315 PF00072 Response regulator receiver domain CF59_RS14320 PF07411 Domain of unknown function (DUF1508) CF59_RS14325 PF01136 Peptidase family U32 CF59_RS14325 PF16325 Peptidase family U32 C-terminal domain CF59_RS14370 PF02796 Helix-turn-helix domain of resolvase CF59_RS14370 PF00239 Resolvase, N terminal domain CF59_RS14380 PF07484 Phage Tail Collar Domain CF59_RS14385 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CF59_RS14390 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CF59_RS14515 PF05840 Bacteriophage replication gene A protein (GPA) CF59_RS14550 PF02899 Phage integrase, N-terminal SAM-like domain CF59_RS14550 PF00589 Phage integrase family CF59_RS14565 PF00781 Diacylglycerol kinase catalytic domain CF59_RS14570 PF08220 DeoR-like helix-turn-helix domain CF59_RS14575 PF08240 Alcohol dehydrogenase GroES-like domain CF59_RS14575 PF00107 Zinc-binding dehydrogenase CF59_RS14580 PF03611 PTS system sugar-specific permease component CF59_RS14585 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF59_RS14590 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF59_RS14595 PF08013 Tagatose 6 phosphate kinase CF59_RS14600 PF01116 Fructose-bisphosphate aldolase class-II CF59_RS14605 PF01791 DeoC/LacD family aldolase CF59_RS14610 PF03825 Nucleoside H+ symporter CF59_RS14615 PF03747 ADP-ribosylglycohydrolase CF59_RS14620 PF00294 pfkB family carbohydrate kinase CF59_RS14625 PF07702 UTRA domain CF59_RS14625 PF00392 Bacterial regulatory proteins, gntR family CF59_RS14630 PF01183 Glycosyl hydrolases family 25 CF59_RS14635 PF08543 Phosphomethylpyrimidine kinase CF59_RS14640 PF02110 Hydroxyethylthiazole kinase family CF59_RS14645 PF02583 Metal-sensitive transcriptional repressor CF59_RS14650 PF03824 High-affinity nickel-transport protein CF59_RS14655 PF11776 Nickel/cobalt transporter regulator CF59_RS14660 PF00419 Fimbrial protein CF59_RS14665 PF13954 PapC N-terminal domain CF59_RS14665 PF00577 Outer membrane usher protein CF59_RS14665 PF13953 PapC C-terminal domain CF59_RS14670 PF02753 Pili assembly chaperone PapD, C-terminal domain CF59_RS14670 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF59_RS14675 PF00419 Fimbrial protein CF59_RS14685 PF10836 Protein of unknown function (DUF2574) CF59_RS14690 PF10609 NUBPL iron-transfer P-loop NTPase CF59_RS14695 PF01588 Putative tRNA binding domain CF59_RS14695 PF09334 tRNA synthetases class I (M) CF59_RS14700 PF13569 Domain of unknown function (DUF4132) CF59_RS14705 PF13569 Domain of unknown function (DUF4132) CF59_RS14720 PF07728 AAA domain (dynein-related subfamily) CF59_RS14730 PF05762 VWA domain containing CoxE-like protein CF59_RS14735 PF04434 SWIM zinc finger CF59_RS14740 PF06998 Protein of unknown function (DUF1307) CF59_RS14745 PF07308 Protein of unknown function (DUF1456) CF59_RS14750 PF00072 Response regulator receiver domain CF59_RS14750 PF04397 LytTr DNA-binding domain CF59_RS14755 PF06580 Histidine kinase CF59_RS14755 PF07694 5TMR of 5TMR-LYT CF59_RS14760 PF13411 MerR HTH family regulatory protein CF59_RS14770 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS14775 PF00005 ABC transporter CF59_RS14780 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS14785 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CF59_RS14790 PF01915 Glycosyl hydrolase family 3 C-terminal domain CF59_RS14790 PF14310 Fibronectin type III-like domain CF59_RS14790 PF00933 Glycosyl hydrolase family 3 N terminal domain CF59_RS14795 PF09330 D-lactate dehydrogenase, membrane binding CF59_RS14795 PF01565 FAD binding domain CF59_RS14800 PF00768 D-alanyl-D-alanine carboxypeptidase CF59_RS14805 PF04893 Yip1 domain CF59_RS14810 PF09335 SNARE associated Golgi protein CF59_RS14820 PF02321 Outer membrane efflux protein CF59_RS14830 PF01207 Dihydrouridine synthase (Dus) CF59_RS14835 PF01494 FAD binding domain CF59_RS14840 PF02798 Glutathione S-transferase, N-terminal domain CF59_RS14840 PF14497 Glutathione S-transferase, C-terminal domain CF59_RS14845 PF01557 Fumarylacetoacetate (FAA) hydrolase family CF59_RS14850 PF07883 Cupin domain CF59_RS14855 PF07690 Major Facilitator Superfamily CF59_RS14860 PF03466 LysR substrate binding domain CF59_RS14860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS14865 PF03788 LrgA family CF59_RS14870 PF04172 LrgB-like family CF59_RS14875 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CF59_RS14875 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CF59_RS14880 PF02698 DUF218 domain CF59_RS14885 PF10808 Protein of unknown function (DUF2542) CF59_RS14890 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CF59_RS14890 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF59_RS14895 PF01180 Dihydroorotate dehydrogenase CF59_RS14900 PF02653 Branched-chain amino acid transport system / permease component CF59_RS14905 PF00005 ABC transporter CF59_RS14910 PF13407 Periplasmic binding protein domain CF59_RS14915 PF00356 Bacterial regulatory proteins, lacI family CF59_RS14925 PF04235 Protein of unknown function (DUF418) CF59_RS14930 PF01227 GTP cyclohydrolase I CF59_RS14940 PF00756 Putative esterase CF59_RS14945 PF07715 TonB-dependent Receptor Plug Domain CF59_RS14945 PF00593 TonB dependent receptor CF59_RS14955 PF00324 Amino acid permease CF59_RS14960 PF03466 LysR substrate binding domain CF59_RS14960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS14965 PF03601 Conserved hypothetical protein 698 CF59_RS14970 PF01261 Xylose isomerase-like TIM barrel CF59_RS14975 PF00294 pfkB family carbohydrate kinase CF59_RS14980 PF01773 Na+ dependent nucleoside transporter N-terminus CF59_RS14980 PF07662 Na+ dependent nucleoside transporter C-terminus CF59_RS14985 PF01156 Inosine-uridine preferring nucleoside hydrolase CF59_RS14990 PF00027 Cyclic nucleotide-binding domain CF59_RS14995 PF01773 Na+ dependent nucleoside transporter N-terminus CF59_RS14995 PF07662 Na+ dependent nucleoside transporter C-terminus CF59_RS15000 PF04227 Indigoidine synthase A like protein CF59_RS15005 PF00294 pfkB family carbohydrate kinase CF59_RS15010 PF02378 Phosphotransferase system, EIIC CF59_RS15010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF59_RS15015 PF00294 pfkB family carbohydrate kinase CF59_RS15020 PF00381 PTS HPr component phosphorylation site CF59_RS15020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF59_RS15025 PF07690 Major Facilitator Superfamily CF59_RS15030 PF03692 Putative zinc- or iron-chelating domain CF59_RS15035 PF08207 Elongation factor P (EF-P) KOW-like domain CF59_RS15035 PF01132 Elongation factor P (EF-P) OB domain CF59_RS15035 PF09285 Elongation factor P, C-terminal CF59_RS15040 PF01232 Mannitol dehydrogenase Rossmann domain CF59_RS15040 PF08125 Mannitol dehydrogenase C-terminal domain CF59_RS15045 PF07683 Cobalamin synthesis protein cobW C-terminal domain CF59_RS15045 PF02492 CobW/HypB/UreG, nucleotide-binding domain CF59_RS15050 PF01569 PAP2 superfamily CF59_RS15055 PF00877 NlpC/P60 family CF59_RS15060 PF12792 CSS motif domain associated with EAL CF59_RS15060 PF00563 EAL domain CF59_RS15065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF59_RS15070 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS15075 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS15075 PF12911 N-terminal TM domain of oligopeptide transport permease C CF59_RS15080 PF00005 ABC transporter CF59_RS15080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF59_RS15085 PF13989 YejG-like protein CF59_RS15090 PF07690 Major Facilitator Superfamily CF59_RS15095 PF00849 RNA pseudouridylate synthase CF59_RS15095 PF01479 S4 domain CF59_RS15100 PF00271 Helicase conserved C-terminal domain CF59_RS15100 PF04851 Type III restriction enzyme, res subunit CF59_RS15105 PF01386 Ribosomal L25p family CF59_RS15110 PF04245 37-kD nucleoid-associated bacterial protein CF59_RS15115 PF07208 Protein of unknown function (DUF1414) CF59_RS15120 PF11893 Domain of unknown function (DUF3413) CF59_RS15120 PF00884 Sulfatase CF59_RS15130 PF16168 Adhesin of bacterial autotransporter system, probable stalk CF59_RS15130 PF03797 Autotransporter beta-domain CF59_RS15130 PF03212 Pertactin CF59_RS15140 PF00072 Response regulator receiver domain CF59_RS15140 PF00196 Bacterial regulatory proteins, luxR family CF59_RS15145 PF03918 Cytochrome C biogenesis protein CF59_RS15150 PF08534 Redoxin CF59_RS15155 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CF59_RS15155 PF01578 Cytochrome C assembly protein CF59_RS15160 PF03100 CcmE CF59_RS15165 PF04995 Heme exporter protein D (CcmD) CF59_RS15170 PF01578 Cytochrome C assembly protein CF59_RS15175 PF03379 CcmB protein CF59_RS15180 PF00005 ABC transporter CF59_RS15185 PF03264 NapC/NirT cytochrome c family, N-terminal region CF59_RS15190 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CF59_RS15195 PF13237 4Fe-4S dicluster domain CF59_RS15195 PF12801 4Fe-4S binding domain CF59_RS15200 PF12800 4Fe-4S binding domain CF59_RS15200 PF12838 4Fe-4S dicluster domain CF59_RS15205 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF59_RS15205 PF00384 Molybdopterin oxidoreductase CF59_RS15205 PF01568 Molydopterin dinucleotide binding domain CF59_RS15210 PF03927 NapD protein CF59_RS15215 PF12800 4Fe-4S binding domain CF59_RS15215 PF00037 4Fe-4S binding domain CF59_RS15215 PF13187 4Fe-4S dicluster domain CF59_RS15225 PF03974 Ecotin CF59_RS15230 PF06039 Malate:quinone oxidoreductase (Mqo) CF59_RS15235 PF00005 ABC transporter CF59_RS15240 PF13532 2OG-Fe(II) oxygenase superfamily CF59_RS15245 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CF59_RS15245 PF12833 Helix-turn-helix domain CF59_RS15245 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CF59_RS15245 PF02805 Metal binding domain of Ada CF59_RS15250 PF02424 ApbE family CF59_RS15255 PF00267 Gram-negative porin CF59_RS15265 PF16359 RcsD-ABL domain CF59_RS15265 PF01627 Hpt domain CF59_RS15265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS15270 PF00072 Response regulator receiver domain CF59_RS15270 PF00196 Bacterial regulatory proteins, luxR family CF59_RS15275 PF09456 RcsC Alpha-Beta-Loop (ABL) CF59_RS15275 PF00512 His Kinase A (phospho-acceptor) domain CF59_RS15275 PF00072 Response regulator receiver domain CF59_RS15275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS15280 PF00989 PAS fold CF59_RS15280 PF00512 His Kinase A (phospho-acceptor) domain CF59_RS15280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS15295 PF00072 Response regulator receiver domain CF59_RS15295 PF09456 RcsC Alpha-Beta-Loop (ABL) CF59_RS15295 PF00512 His Kinase A (phospho-acceptor) domain CF59_RS15295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS15310 PF01144 Coenzyme A transferase CF59_RS15315 PF01144 Coenzyme A transferase CF59_RS15320 PF02667 Short chain fatty acid transporter CF59_RS15330 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) CF59_RS15340 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) CF59_RS15345 PF10062 Predicted secreted protein (DUF2300) CF59_RS15345 PF08486 Stage II sporulation protein CF59_RS15350 PF07703 Alpha-2-macroglobulin bait region domain CF59_RS15350 PF00207 Alpha-2-macroglobulin family CF59_RS15350 PF01835 MG2 domain CF59_RS15355 PF06672 Protein of unknown function (DUF1175) CF59_RS15365 PF03989 DNA gyrase C-terminal domain, beta-propeller CF59_RS15365 PF00521 DNA gyrase/topoisomerase IV, subunit A CF59_RS15385 PF00665 Integrase core domain CF59_RS15385 PF13333 Integrase core domain CF59_RS15385 PF13276 HTH-like domain CF59_RS15400 PF02867 Ribonucleotide reductase, barrel domain CF59_RS15400 PF03477 ATP cone domain CF59_RS15400 PF00317 Ribonucleotide reductase, all-alpha domain CF59_RS15405 PF00268 Ribonucleotide reductase, small chain CF59_RS15410 PF00111 2Fe-2S iron-sulfur cluster binding domain CF59_RS15420 PF07690 Major Facilitator Superfamily CF59_RS15425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS15425 PF03466 LysR substrate binding domain CF59_RS15430 PF03009 Glycerophosphoryl diester phosphodiesterase family CF59_RS15435 PF07690 Major Facilitator Superfamily CF59_RS15440 PF04324 BFD-like [2Fe-2S] binding domain CF59_RS15440 PF01266 FAD dependent oxidoreductase CF59_RS15445 PF00890 FAD binding domain CF59_RS15450 PF13183 4Fe-4S dicluster domain CF59_RS15450 PF02754 Cysteine-rich domain CF59_RS15455 PF04754 Putative transposase, YhgA-like CF59_RS15465 PF03328 HpcH/HpaI aldolase/citrate lyase family CF59_RS15470 PF07690 Major Facilitator Superfamily CF59_RS15475 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CF59_RS15475 PF13378 Enolase C-terminal domain-like CF59_RS15480 PF09339 IclR helix-turn-helix domain CF59_RS15480 PF01614 Bacterial transcriptional regulator CF59_RS15485 PF00994 Probable molybdopterin binding domain CF59_RS15490 PF07437 YfaZ precursor CF59_RS15495 PF00293 NUDIX domain CF59_RS15500 PF00300 Histidine phosphatase superfamily (branch 1) CF59_RS15505 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CF59_RS15510 PF00535 Glycosyl transferase family 2 CF59_RS15515 PF01370 NAD dependent epimerase/dehydratase family CF59_RS15515 PF00551 Formyl transferase CF59_RS15515 PF02911 Formyl transferase, C-terminal domain CF59_RS15520 PF01522 Polysaccharide deacetylase CF59_RS15525 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CF59_RS15530 PF00892 EamA-like transporter family CF59_RS15545 PF13193 AMP-binding enzyme C-terminal domain CF59_RS15545 PF00501 AMP-binding enzyme CF59_RS15550 PF13378 Enolase C-terminal domain-like CF59_RS15555 PF00378 Enoyl-CoA hydratase/isomerase CF59_RS15560 PF12697 Alpha/beta hydrolase family CF59_RS15565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CF59_RS15565 PF16582 Middle domain of thiamine pyrophosphate CF59_RS15565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CF59_RS15570 PF00425 chorismate binding enzyme CF59_RS15575 PF05957 Bacterial protein of unknown function (DUF883) CF59_RS15580 PF13673 Acetyltransferase (GNAT) domain CF59_RS15585 PF12706 Beta-lactamase superfamily domain CF59_RS15590 PF02902 Ulp1 protease family, C-terminal catalytic domain CF59_RS15595 PF04389 Peptidase family M28 CF59_RS15600 PF08974 Domain of unknown function (DUF1877) CF59_RS15605 PF00361 Proton-conducting membrane transporter CF59_RS15610 PF00361 Proton-conducting membrane transporter CF59_RS15615 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CF59_RS15615 PF00361 Proton-conducting membrane transporter CF59_RS15620 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CF59_RS15625 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CF59_RS15630 PF12838 4Fe-4S dicluster domain CF59_RS15635 PF00146 NADH dehydrogenase CF59_RS15640 PF00384 Molybdopterin oxidoreductase CF59_RS15640 PF01568 Molydopterin dinucleotide binding domain CF59_RS15640 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CF59_RS15640 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF59_RS15645 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CF59_RS15645 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CF59_RS15645 PF10531 SLBB domain CF59_RS15655 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CF59_RS15655 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CF59_RS15660 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CF59_RS15665 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CF59_RS15670 PF03466 LysR substrate binding domain CF59_RS15670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS15675 PF00155 Aminotransferase class I and II CF59_RS15685 PF03600 Citrate transporter CF59_RS15685 PF02080 TrkA-C domain CF59_RS15690 PF13419 Haloacid dehalogenase-like hydrolase CF59_RS15695 PF03887 YfbU domain CF59_RS15700 PF04217 Protein of unknown function, DUF412 CF59_RS15710 PF00871 Acetokinase family CF59_RS15715 PF01515 Phosphate acetyl/butaryl transferase CF59_RS15715 PF07085 DRTGG domain CF59_RS15720 PF03606 C4-dicarboxylate anaerobic carrier CF59_RS15725 PF00293 NUDIX domain CF59_RS15730 PF12850 Calcineurin-like phosphoesterase superfamily domain CF59_RS15735 PF02798 Glutathione S-transferase, N-terminal domain CF59_RS15735 PF14834 Glutathione S-transferase, C-terminal domain CF59_RS15740 PF00043 Glutathione S-transferase, C-terminal domain CF59_RS15740 PF02798 Glutathione S-transferase, N-terminal domain CF59_RS15745 PF02152 Dihydroneopterin aldolase CF59_RS15750 PF08338 Domain of unknown function (DUF1731) CF59_RS15750 PF01370 NAD dependent epimerase/dehydratase family CF59_RS15755 PF04754 Putative transposase, YhgA-like CF59_RS15760 PF00005 ABC transporter CF59_RS15765 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS15770 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS15775 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF59_RS15780 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF59_RS15785 PF02441 Flavoprotein CF59_RS15790 PF00156 Phosphoribosyl transferase domain CF59_RS15795 PF02674 Colicin V production protein CF59_RS15800 PF05036 Sporulation related domain CF59_RS15805 PF08245 Mur ligase middle domain CF59_RS15805 PF02875 Mur ligase family, glutamate ligase domain CF59_RS15810 PF01039 Carboxyl transferase domain CF59_RS15810 PF17848 Acetyl-coA carboxylase zinc finger domain CF59_RS15815 PF09335 SNARE associated Golgi protein CF59_RS15820 PF01416 tRNA pseudouridine synthase CF59_RS15825 PF02774 Semialdehyde dehydrogenase, dimerisation domain CF59_RS15825 PF01118 Semialdehyde dehydrogenase, NAD binding domain CF59_RS15830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CF59_RS15830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CF59_RS15830 PF11890 Domain of unknown function (DUF3410) CF59_RS15840 PF07690 Major Facilitator Superfamily CF59_RS15845 PF02801 Beta-ketoacyl synthase, C-terminal domain CF59_RS15845 PF00109 Beta-ketoacyl synthase, N-terminal domain CF59_RS15850 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CF59_RS15850 PF01266 FAD dependent oxidoreductase CF59_RS15855 PF08891 YfcL protein CF59_RS15860 PF04315 Elongation factor P hydroxylase CF59_RS15865 PF01925 Sulfite exporter TauE/SafE CF59_RS15870 PF03411 Penicillin-insensitive murein endopeptidase CF59_RS15875 PF01264 Chorismate synthase CF59_RS15880 PF05175 Methyltransferase small domain CF59_RS15885 PF01713 Smr domain CF59_RS15890 PF00665 Integrase core domain CF59_RS15890 PF13276 HTH-like domain CF59_RS15890 PF13333 Integrase core domain CF59_RS15905 PF11245 Protein of unknown function (DUF2544) CF59_RS15910 PF00419 Fimbrial protein CF59_RS15915 PF00419 Fimbrial protein CF59_RS15920 PF00419 Fimbrial protein CF59_RS15925 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF59_RS15925 PF02753 Pili assembly chaperone PapD, C-terminal domain CF59_RS15930 PF13954 PapC N-terminal domain CF59_RS15930 PF13953 PapC C-terminal domain CF59_RS15930 PF00577 Outer membrane usher protein CF59_RS15935 PF00419 Fimbrial protein CF59_RS15940 PF00300 Histidine phosphatase superfamily (branch 1) CF59_RS15945 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CF59_RS15945 PF00378 Enoyl-CoA hydratase/isomerase CF59_RS15945 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CF59_RS15950 PF02803 Thiolase, C-terminal domain CF59_RS15950 PF00108 Thiolase, N-terminal domain CF59_RS15955 PF04175 Protein of unknown function (DUF406) CF59_RS15960 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CF59_RS15970 PF04333 MlaA lipoprotein CF59_RS15975 PF01226 Formate/nitrite transporter CF59_RS15985 PF14659 Phage integrase, N-terminal SAM-like domain CF59_RS15985 PF00589 Phage integrase family CF59_RS15985 PF13356 Arm DNA-binding domain CF59_RS16000 PF00665 Integrase core domain CF59_RS16005 PF01527 Transposase CF59_RS16025 PF01306 LacY proton/sugar symporter CF59_RS16030 PF00294 pfkB family carbohydrate kinase CF59_RS16035 PF00251 Glycosyl hydrolases family 32 N-terminal domain CF59_RS16035 PF08244 Glycosyl hydrolases family 32 C terminal CF59_RS16040 PF00356 Bacterial regulatory proteins, lacI family CF59_RS16040 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CF59_RS16045 PF02447 GntP family permease CF59_RS16050 PF00291 Pyridoxal-phosphate dependent enzyme CF59_RS16055 PF07690 Major Facilitator Superfamily CF59_RS16060 PF00529 HlyD membrane-fusion protein of T1SS CF59_RS16060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF59_RS16065 PF00072 Response regulator receiver domain CF59_RS16065 PF00196 Bacterial regulatory proteins, luxR family CF59_RS16070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS16070 PF00512 His Kinase A (phospho-acceptor) domain CF59_RS16070 PF00072 Response regulator receiver domain CF59_RS16070 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF59_RS16075 PF02515 CoA-transferase family III CF59_RS16080 PF03547 Membrane transport protein CF59_RS16085 PF00205 Thiamine pyrophosphate enzyme, central domain CF59_RS16085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CF59_RS16085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CF59_RS16090 PF02515 CoA-transferase family III CF59_RS16095 PF10938 YfdX protein CF59_RS16110 PF10810 Protein of unknown function (DUF2545) CF59_RS16115 PF03279 Bacterial lipid A biosynthesis acyltransferase CF59_RS16120 PF00155 Aminotransferase class I and II CF59_RS16125 PF06580 Histidine kinase CF59_RS16125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS16125 PF07694 5TMR of 5TMR-LYT CF59_RS16130 PF04397 LytTr DNA-binding domain CF59_RS16130 PF00072 Response regulator receiver domain CF59_RS16135 PF12833 Helix-turn-helix domain CF59_RS16140 PF00381 PTS HPr component phosphorylation site CF59_RS16140 PF00391 PEP-utilising enzyme, mobile domain CF59_RS16140 PF05524 PEP-utilising enzyme, N-terminal CF59_RS16140 PF02896 PEP-utilising enzyme, TIM barrel domain CF59_RS16140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF59_RS16145 PF05343 M42 glutamyl aminopeptidase CF59_RS16150 PF01321 Creatinase/Prolidase N-terminal domain CF59_RS16150 PF00557 Metallopeptidase family M24 CF59_RS16155 PF02378 Phosphotransferase system, EIIC CF59_RS16160 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF59_RS16165 PF02685 Glucokinase CF59_RS16170 PF00654 Voltage gated chloride channel CF59_RS16175 PF10697 Protein of unknown function (DUF2502) CF59_RS16185 PF01566 Natural resistance-associated macrophage protein CF59_RS16190 PF01773 Na+ dependent nucleoside transporter N-terminus CF59_RS16190 PF07662 Na+ dependent nucleoside transporter C-terminus CF59_RS16190 PF07670 Nucleoside recognition CF59_RS16195 PF05231 MASE1 CF59_RS16195 PF00563 EAL domain CF59_RS16210 PF07037 Putative transcription regulator (DUF1323) CF59_RS16215 PF07037 Putative transcription regulator (DUF1323) CF59_RS16220 PF00749 tRNA synthetases class I (E and Q), catalytic domain CF59_RS16245 PF03466 LysR substrate binding domain CF59_RS16245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS16255 PF03825 Nucleoside H+ symporter CF59_RS16260 PF01048 Phosphorylase superfamily CF59_RS16265 PF03502 Nucleoside-specific channel-forming protein, Tsx CF59_RS16270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS16270 PF03466 LysR substrate binding domain CF59_RS16275 PF13593 SBF-like CPA transporter family (DUF4137) CF59_RS16280 PF12843 Putative quorum-sensing-regulated virulence factor CF59_RS16285 PF01653 NAD-dependent DNA ligase adenylation domain CF59_RS16285 PF00533 BRCA1 C Terminus (BRCT) domain CF59_RS16285 PF03120 NAD-dependent DNA ligase OB-fold domain CF59_RS16285 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CF59_RS16285 PF12826 Helix-hairpin-helix motif CF59_RS16290 PF04354 ZipA, C-terminal FtsZ-binding domain CF59_RS16300 PF00291 Pyridoxal-phosphate dependent enzyme CF59_RS16305 PF00381 PTS HPr component phosphorylation site CF59_RS16310 PF05524 PEP-utilising enzyme, N-terminal CF59_RS16310 PF02896 PEP-utilising enzyme, TIM barrel domain CF59_RS16310 PF00391 PEP-utilising enzyme, mobile domain CF59_RS16315 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CF59_RS16320 PF08543 Phosphomethylpyrimidine kinase CF59_RS16325 PF17263 Family of unknown function (DUF5329) CF59_RS16330 PF00291 Pyridoxal-phosphate dependent enzyme CF59_RS16335 PF00005 ABC transporter CF59_RS16340 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS16345 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS16360 PF01418 Helix-turn-helix domain, rpiR family CF59_RS16360 PF01380 SIS domain CF59_RS16365 PF01380 SIS domain CF59_RS16370 PF02378 Phosphotransferase system, EIIC CF59_RS16370 PF00367 phosphotransferase system, EIIB CF59_RS16375 PF00144 Beta-lactamase CF59_RS16380 PF04261 Dyp-type peroxidase family CF59_RS16385 PF06572 Protein of unknown function (DUF1131) CF59_RS16390 PF11143 Protein of unknown function (DUF2919) CF59_RS16395 PF00583 Acetyltransferase (GNAT) family CF59_RS16400 PF01520 N-acetylmuramoyl-L-alanine amidase CF59_RS16405 PF01218 Coproporphyrinogen III oxidase CF59_RS16410 PF12833 Helix-turn-helix domain CF59_RS16415 PF16365 Ethanolamine utilization protein EutK C-terminus CF59_RS16415 PF00936 BMC domain CF59_RS16420 PF00936 BMC domain CF59_RS16425 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CF59_RS16430 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CF59_RS16435 PF06277 Ethanolamine utilisation protein EutA CF59_RS16440 PF04346 Ethanolamine utilisation protein, EutH CF59_RS16445 PF00465 Iron-containing alcohol dehydrogenase CF59_RS16455 PF00171 Aldehyde dehydrogenase family CF59_RS16460 PF03319 Ethanolamine utilisation protein EutN/carboxysome CF59_RS16465 PF00936 BMC domain CF59_RS16470 PF01515 Phosphate acetyl/butaryl transferase CF59_RS16475 PF01923 Cobalamin adenosyltransferase CF59_RS16480 PF06249 Ethanolamine utilisation protein EutQ CF59_RS16485 PF10662 Ethanolamine utilisation - propanediol utilisation CF59_RS16490 PF00936 BMC domain CF59_RS16495 PF03949 Malic enzyme, NAD binding domain CF59_RS16495 PF00390 Malic enzyme, N-terminal domain CF59_RS16495 PF01515 Phosphate acetyl/butaryl transferase CF59_RS16500 PF00923 Transaldolase/Fructose-6-phosphate aldolase CF59_RS16505 PF02780 Transketolase, C-terminal domain CF59_RS16505 PF00456 Transketolase, thiamine diphosphate binding domain CF59_RS16505 PF02779 Transketolase, pyrimidine binding domain CF59_RS16510 PF06674 Protein of unknown function (DUF1176) CF59_RS16515 PF00293 NUDIX domain CF59_RS16520 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CF59_RS16520 PF13247 4Fe-4S dicluster domain CF59_RS16520 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF59_RS16525 PF07730 Histidine kinase CF59_RS16525 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CF59_RS16525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS16525 PF00672 HAMP domain CF59_RS16530 PF00873 AcrB/AcrD/AcrF family CF59_RS16540 PF03960 ArsC family CF59_RS16545 PF01546 Peptidase family M20/M25/M40 CF59_RS16545 PF07687 Peptidase dimerisation domain CF59_RS16550 PF13980 Uncharacterised protein family (UPF0370) CF59_RS16565 PF13333 Integrase core domain CF59_RS16565 PF13276 HTH-like domain CF59_RS16565 PF00665 Integrase core domain CF59_RS16570 PF02230 Phospholipase/Carboxylesterase CF59_RS16575 PF08351 Domain of unknown function (DUF1726) CF59_RS16575 PF17176 tRNA-binding domain CF59_RS16575 PF05127 Helicase CF59_RS16575 PF13718 GNAT acetyltransferase 2 CF59_RS16580 PF04228 Putative neutral zinc metallopeptidase CF59_RS16585 PF01259 SAICAR synthetase CF59_RS16595 PF06804 NlpB/DapX lipoprotein CF59_RS16600 PF00701 Dihydrodipicolinate synthetase family CF59_RS16605 PF01842 ACT domain CF59_RS16610 PF00578 AhpC/TSA family CF59_RS16615 PF12798 4Fe-4S binding domain CF59_RS16615 PF00037 4Fe-4S binding domain CF59_RS16620 PF00361 Proton-conducting membrane transporter CF59_RS16625 PF00146 NADH dehydrogenase CF59_RS16630 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CF59_RS16630 PF00361 Proton-conducting membrane transporter CF59_RS16635 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CF59_RS16640 PF00361 Proton-conducting membrane transporter CF59_RS16640 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CF59_RS16645 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CF59_RS16645 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CF59_RS16645 PF00374 Nickel-dependent hydrogenase CF59_RS16650 PF12838 4Fe-4S dicluster domain CF59_RS16655 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CF59_RS16660 PF07450 Formate hydrogenlyase maturation protein HycH CF59_RS16665 PF01590 GAF domain CF59_RS16665 PF00158 Sigma-54 interaction domain CF59_RS16670 PF01226 Formate/nitrite transporter CF59_RS16675 PF01594 AI-2E family transporter CF59_RS16680 PF01435 Peptidase family M48 CF59_RS16685 PF03960 ArsC family CF59_RS16690 PF00308 Bacterial dnaA protein CF59_RS16695 PF00860 Permease family CF59_RS16705 PF02769 AIR synthase related protein, C-terminal domain CF59_RS16705 PF00586 AIR synthase related protein, N-terminal domain CF59_RS16710 PF00551 Formyl transferase CF59_RS16715 PF17941 Polyphosphate kinase C-terminal domain 1 CF59_RS16715 PF13090 Polyphosphate kinase C-terminal domain 2 CF59_RS16715 PF02503 Polyphosphate kinase middle domain CF59_RS16715 PF13089 Polyphosphate kinase N-terminal domain CF59_RS16720 PF02541 Ppx/GppA phosphatase family CF59_RS16725 PF00563 EAL domain CF59_RS16725 PF05231 MASE1 CF59_RS16735 PF11119 Protein of unknown function (DUF2633) CF59_RS16740 PF05433 Glycine zipper 2TM domain CF59_RS16745 PF17358 Family of unknown function (DUF5384) CF59_RS16750 PF00117 Glutamine amidotransferase class-I CF59_RS16750 PF02540 NAD synthase CF59_RS16750 PF00958 GMP synthase C terminal domain CF59_RS16755 PF00571 CBS domain CF59_RS16755 PF00478 IMP dehydrogenase / GMP reductase domain CF59_RS16760 PF02601 Exonuclease VII, large subunit CF59_RS16760 PF13742 OB-fold nucleic acid binding domain CF59_RS16775 PF09134 Invasin, domain 3 CF59_RS16775 PF07979 Intimin C-type lectin domain CF59_RS16775 PF02369 Bacterial Ig-like domain (group 1) CF59_RS16775 PF11924 Inverse autotransporter, beta-domain CF59_RS16780 PF07191 zinc-ribbons CF59_RS16785 PF01926 50S ribosome-binding GTPase CF59_RS16785 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CF59_RS16790 PF13360 PQQ-like domain CF59_RS16795 PF09976 Tetratricopeptide repeat-like domain CF59_RS16800 PF03129 Anticodon binding domain CF59_RS16800 PF13393 Histidyl-tRNA synthetase CF59_RS16805 PF04551 GcpE protein CF59_RS16810 PF13464 Domain of unknown function (DUF4115) CF59_RS16815 PF04055 Radical SAM superfamily CF59_RS16820 PF00334 Nucleoside diphosphate kinase CF59_RS16825 PF00912 Transglycosylase CF59_RS16825 PF06832 Penicillin-Binding Protein C-terminus Family CF59_RS16825 PF00905 Penicillin binding protein transpeptidase domain CF59_RS16830 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CF59_RS16830 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CF59_RS16830 PF17962 Bacterial macroglobulin domain 6 CF59_RS16830 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CF59_RS16830 PF07678 A-macroglobulin TED domain CF59_RS16830 PF00207 Alpha-2-macroglobulin family CF59_RS16830 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CF59_RS16830 PF01835 MG2 domain CF59_RS16830 PF07703 Alpha-2-macroglobulin bait region domain CF59_RS16835 PF00581 Rhodanese-like domain CF59_RS16840 PF14581 SseB protein C-terminal domain CF59_RS16840 PF07179 SseB protein N-terminal domain CF59_RS16845 PF00883 Cytosol aminopeptidase family, catalytic domain CF59_RS16845 PF12404 Peptidase CF59_RS16850 PF04384 Iron-sulphur cluster assembly CF59_RS16855 PF00111 2Fe-2S iron-sulfur cluster binding domain CF59_RS16860 PF00012 Hsp70 protein CF59_RS16865 PF07743 HSCB C-terminal oligomerisation domain CF59_RS16870 PF01521 Iron-sulphur cluster biosynthesis CF59_RS16875 PF01592 NifU-like N terminal domain CF59_RS16880 PF00266 Aminotransferase class-V CF59_RS16885 PF02082 Transcriptional regulator CF59_RS16890 PF00588 SpoU rRNA Methylase family CF59_RS16895 PF00459 Inositol monophosphatase family CF59_RS16900 PF12146 Serine aminopeptidase, S33 CF59_RS16905 PF00874 PRD domain CF59_RS16910 PF12832 MFS_1 like family CF59_RS16915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS16915 PF03466 LysR substrate binding domain CF59_RS16920 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CF59_RS16920 PF00355 Rieske [2Fe-2S] domain CF59_RS16925 PF00866 Ring hydroxylating beta subunit CF59_RS16930 PF00355 Rieske [2Fe-2S] domain CF59_RS16935 PF00106 short chain dehydrogenase CF59_RS16940 PF14759 Reductase C-terminal CF59_RS16940 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF59_RS16945 PF07681 DoxX CF59_RS16950 PF01263 Aldose 1-epimerase CF59_RS16955 PF00107 Zinc-binding dehydrogenase CF59_RS16955 PF08240 Alcohol dehydrogenase GroES-like domain CF59_RS16960 PF02653 Branched-chain amino acid transport system / permease component CF59_RS16965 PF00005 ABC transporter CF59_RS16970 PF13407 Periplasmic binding protein domain CF59_RS16975 PF17128 Domain of unknown function (DUF5107) CF59_RS16975 PF13181 Tetratricopeptide repeat CF59_RS16980 PF00480 ROK family CF59_RS16985 PF00464 Serine hydroxymethyltransferase CF59_RS16995 PF00175 Oxidoreductase NAD-binding domain CF59_RS16995 PF00042 Globin CF59_RS16995 PF00970 Oxidoreductase FAD-binding domain CF59_RS17000 PF00543 Nitrogen regulatory protein P-II CF59_RS17005 PF00072 Response regulator receiver domain CF59_RS17005 PF00158 Sigma-54 interaction domain CF59_RS17010 PF13942 YfhG lipoprotein CF59_RS17015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS17015 PF00512 His Kinase A (phospho-acceptor) domain CF59_RS17020 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CF59_RS17020 PF02769 AIR synthase related protein, C-terminal domain CF59_RS17020 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CF59_RS17025 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF59_RS17025 PF01464 Transglycosylase SLT domain CF59_RS17030 PF14437 MafB19-like deaminase CF59_RS17040 PF01380 SIS domain CF59_RS17040 PF01418 Helix-turn-helix domain, rpiR family CF59_RS17045 PF12838 4Fe-4S dicluster domain CF59_RS17065 PF01648 4'-phosphopantetheinyl transferase superfamily CF59_RS17070 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CF59_RS17075 PF02565 Recombination protein O C terminal CF59_RS17075 PF11967 Recombination protein O N terminal CF59_RS17080 PF07650 KH domain CF59_RS17080 PF01926 50S ribosome-binding GTPase CF59_RS17085 PF14622 Ribonuclease-III-like CF59_RS17085 PF00035 Double-stranded RNA binding motif CF59_RS17090 PF10502 Signal peptidase, peptidase S26 CF59_RS17095 PF03144 Elongation factor Tu domain 2 CF59_RS17095 PF06421 GTP-binding protein LepA C-terminus CF59_RS17095 PF00679 Elongation factor G C-terminus CF59_RS17095 PF00009 Elongation factor Tu GTP binding domain CF59_RS17105 PF03888 MucB/RseB N-terminal domain CF59_RS17105 PF17188 MucB/RseB C-terminal domain CF59_RS17110 PF03873 Anti sigma-E protein RseA, C-terminal domain CF59_RS17110 PF03872 Anti sigma-E protein RseA, N-terminal domain CF59_RS17115 PF04542 Sigma-70 region 2 CF59_RS17115 PF08281 Sigma-70, region 4 CF59_RS17125 PF02910 Fumarate reductase flavoprotein C-term CF59_RS17125 PF00890 FAD binding domain CF59_RS17130 PF05175 Methyltransferase small domain CF59_RS17135 PF00271 Helicase conserved C-terminal domain CF59_RS17135 PF00270 DEAD/DEAH box helicase CF59_RS17140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS17140 PF03466 LysR substrate binding domain CF59_RS17145 PF01810 LysE type translocator CF59_RS17150 PF01228 Glycine radical CF59_RS17155 PF03167 Uracil DNA glycosylase superfamily CF59_RS17160 PF08032 RNA 2'-O ribose methyltransferase substrate binding CF59_RS17160 PF00588 SpoU rRNA Methylase family CF59_RS17170 PF00085 Thioredoxin CF59_RS17175 PF03942 DTW domain CF59_RS17180 PF13607 Succinyl-CoA ligase like flavodoxin domain CF59_RS17180 PF00583 Acetyltransferase (GNAT) family CF59_RS17180 PF13380 CoA binding domain CF59_RS17185 PF13091 PLD-like domain CF59_RS17190 PF10043 Predicted periplasmic lipoprotein (DUF2279) CF59_RS17195 PF00083 Sugar (and other) transporter CF59_RS17200 PF13333 Integrase core domain CF59_RS17200 PF00665 Integrase core domain CF59_RS17200 PF13276 HTH-like domain CF59_RS17235 PF00004 ATPase family associated with various cellular activities (AAA) CF59_RS17235 PF17871 AAA lid domain CF59_RS17235 PF07724 AAA domain (Cdc48 subfamily) CF59_RS17235 PF02861 Clp amino terminal domain, pathogenicity island component CF59_RS17235 PF10431 C-terminal, D2-small domain, of ClpB protein CF59_RS17240 PF02578 Multi-copper polyphenol oxidoreductase laccase CF59_RS17245 PF01479 S4 domain CF59_RS17245 PF00849 RNA pseudouridylate synthase CF59_RS17250 PF13525 Outer membrane lipoprotein CF59_RS17260 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CF59_RS17265 PF00800 Prephenate dehydratase CF59_RS17265 PF01817 Chorismate mutase type II CF59_RS17270 PF02153 Prephenate dehydrogenase CF59_RS17270 PF01817 Chorismate mutase type II CF59_RS17275 PF00793 DAHP synthetase I family CF59_RS17280 PF10973 Protein of unknown function (DUF2799) CF59_RS17285 PF13689 YfiR/HmsC-like CF59_RS17295 PF00691 OmpA family CF59_RS17300 PF01245 Ribosomal protein L19 CF59_RS17305 PF01746 tRNA (Guanine-1)-methyltransferase CF59_RS17310 PF05239 PRC-barrel domain CF59_RS17310 PF01782 RimM N-terminal domain CF59_RS17315 PF00886 Ribosomal protein S16 CF59_RS17320 PF02881 SRP54-type protein, helical bundle domain CF59_RS17320 PF02978 Signal peptide binding domain CF59_RS17320 PF00448 SRP54-type protein, GTPase domain CF59_RS17325 PF01578 Cytochrome C assembly protein CF59_RS17330 PF00571 CBS domain CF59_RS17330 PF03471 Transporter associated domain CF59_RS17330 PF01595 Cyclin M transmembrane N-terminal domain CF59_RS17335 PF01025 GrpE CF59_RS17345 PF01513 ATP-NAD kinase CF59_RS17350 PF02463 RecF/RecN/SMC N terminal domain CF59_RS17355 PF04355 SmpA / OmlA family CF59_RS17360 PF03658 RnfH family Ubiquitin CF59_RS17365 PF03364 Polyketide cyclase / dehydrase and lipid transport CF59_RS17370 PF01668 SmpB protein CF59_RS17375 PF13356 Arm DNA-binding domain CF59_RS17375 PF00589 Phage integrase family CF59_RS17435 PF17345 Family of unknown function (DUF5375) CF59_RS17445 PF03797 Autotransporter beta-domain CF59_RS17465 PF00128 Alpha amylase, catalytic domain CF59_RS17470 PF08943 CsiD CF59_RS17475 PF01266 FAD dependent oxidoreductase CF59_RS17480 PF00171 Aldehyde dehydrogenase family CF59_RS17485 PF00202 Aminotransferase class-III CF59_RS17490 PF00324 Amino acid permease CF59_RS17495 PF00392 Bacterial regulatory proteins, gntR family CF59_RS17495 PF07729 FCD domain CF59_RS17500 PF04972 BON domain CF59_RS17500 PF01476 LysM domain CF59_RS17505 PF01679 Proteolipid membrane potential modulator CF59_RS17510 PF01022 Bacterial regulatory protein, arsR family CF59_RS17515 PF11127 Protein of unknown function (DUF2892) CF59_RS17515 PF00581 Rhodanese-like domain CF59_RS17520 PF00816 H-NS histone family CF59_RS17525 PF06610 L-alanine exporter CF59_RS17530 PF09400 Protein of unknown function (DUF2002) CF59_RS17535 PF05957 Bacterial protein of unknown function (DUF883) CF59_RS17540 PF00392 Bacterial regulatory proteins, gntR family CF59_RS17540 PF00155 Aminotransferase class I and II CF59_RS17545 PF02627 Carboxymuconolactone decarboxylase family CF59_RS17550 PF00462 Glutaredoxin CF59_RS17555 PF07972 NrdI Flavodoxin like CF59_RS17560 PF00317 Ribonucleotide reductase, all-alpha domain CF59_RS17560 PF02867 Ribonucleotide reductase, barrel domain CF59_RS17560 PF08343 Ribonucleotide reductase N-terminal CF59_RS17565 PF00268 Ribonucleotide reductase, small chain CF59_RS17570 PF00571 CBS domain CF59_RS17570 PF00005 ABC transporter CF59_RS17575 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS17580 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CF59_RS17585 PF07690 Major Facilitator Superfamily CF59_RS17590 PF03591 AzlC protein CF59_RS17595 PF05437 Branched-chain amino acid transport protein (AzlD) CF59_RS17600 PF01047 MarR family CF59_RS17605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF59_RS17605 PF00529 HlyD membrane-fusion protein of T1SS CF59_RS17610 PF07690 Major Facilitator Superfamily CF59_RS17615 PF02664 S-Ribosylhomocysteinase (LuxS) CF59_RS17620 PF04262 Glutamate-cysteine ligase CF59_RS17625 PF09335 SNARE associated Golgi protein CF59_RS17630 PF13419 Haloacid dehalogenase-like hydrolase CF59_RS17665 PF02599 Global regulator protein family CF59_RS17670 PF02272 DHHA1 domain CF59_RS17670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CF59_RS17670 PF01411 tRNA synthetases class II (A) CF59_RS17680 PF02631 RecX family CF59_RS17685 PF00154 recA bacterial DNA recombination protein CF59_RS17690 PF02464 Competence-damaged protein CF59_RS17695 PF13406 Transglycosylase SLT domain CF59_RS17700 PF03608 PTS system enzyme II sorbitol-specific factor CF59_RS17705 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CF59_RS17705 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CF59_RS17710 PF03829 PTS system glucitol/sorbitol-specific IIA component CF59_RS17715 PF00106 short chain dehydrogenase CF59_RS17720 PF06923 Glucitol operon activator protein (GutM) CF59_RS17725 PF08220 DeoR-like helix-turn-helix domain CF59_RS17725 PF00455 DeoR C terminal sensor domain CF59_RS17730 PF01380 SIS domain CF59_RS17730 PF00571 CBS domain CF59_RS17735 PF01590 GAF domain CF59_RS17735 PF00158 Sigma-54 interaction domain CF59_RS17740 PF00301 Rubredoxin CF59_RS17740 PF00753 Metallo-beta-lactamase superfamily CF59_RS17740 PF00258 Flavodoxin CF59_RS17745 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF59_RS17745 PF18113 Rubredoxin binding C-terminal domain CF59_RS17750 PF07503 HypF finger CF59_RS17750 PF01300 Telomere recombination CF59_RS17750 PF17788 HypF Kae1-like domain CF59_RS17750 PF00708 Acylphosphatase CF59_RS17755 PF13247 4Fe-4S dicluster domain CF59_RS17755 PF12800 4Fe-4S binding domain CF59_RS17760 PF00356 Bacterial regulatory proteins, lacI family CF59_RS17765 PF02378 Phosphotransferase system, EIIC CF59_RS17765 PF00367 phosphotransferase system, EIIB CF59_RS17770 PF00232 Glycosyl hydrolase family 1 CF59_RS17775 PF01381 Helix-turn-helix CF59_RS17780 PF01750 Hydrogenase maturation protease CF59_RS17785 PF07450 Formate hydrogenlyase maturation protein HycH CF59_RS17790 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CF59_RS17795 PF12838 4Fe-4S dicluster domain CF59_RS17800 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CF59_RS17800 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CF59_RS17800 PF00374 Nickel-dependent hydrogenase CF59_RS17805 PF00146 NADH dehydrogenase CF59_RS17810 PF00361 Proton-conducting membrane transporter CF59_RS17815 PF13247 4Fe-4S dicluster domain CF59_RS17825 PF11046 Transcriptional repressor of hyc and hyp operons CF59_RS17830 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CF59_RS17835 PF02492 CobW/HypB/UreG, nucleotide-binding domain CF59_RS17840 PF01455 HupF/HypC family CF59_RS17845 PF01924 Hydrogenase formation hypA family CF59_RS17850 PF00586 AIR synthase related protein, N-terminal domain CF59_RS17850 PF02769 AIR synthase related protein, C-terminal domain CF59_RS17855 PF00158 Sigma-54 interaction domain CF59_RS17855 PF01590 GAF domain CF59_RS17865 PF11756 Nitrous oxide-stimulated promoter CF59_RS17870 PF01624 MutS domain I CF59_RS17870 PF05188 MutS domain II CF59_RS17870 PF05192 MutS domain III CF59_RS17870 PF05190 MutS family domain IV CF59_RS17870 PF00488 MutS domain V CF59_RS17880 PF00149 Calcineurin-like phosphoesterase CF59_RS17890 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CF59_RS17895 PF02441 Flavoprotein CF59_RS17900 PF01047 MarR family CF59_RS17905 PF04545 Sigma-70, region 4 CF59_RS17905 PF00140 Sigma-70 factor, region 1.2 CF59_RS17905 PF04542 Sigma-70 region 2 CF59_RS17905 PF04539 Sigma-70 region 3 CF59_RS17910 PF01476 LysM domain CF59_RS17910 PF01551 Peptidase family M23 CF59_RS17920 PF01975 Survival protein SurE CF59_RS17925 PF01142 tRNA pseudouridine synthase D (TruD) CF59_RS17930 PF02542 YgbB family CF59_RS17935 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CF59_RS17940 PF04977 Septum formation initiator CF59_RS17945 PF12084 Protein of unknown function (DUF3561) CF59_RS17955 PF00009 Elongation factor Tu GTP binding domain CF59_RS17960 PF01507 Phosphoadenosine phosphosulfate reductase family CF59_RS17965 PF04389 Peptidase family M28 CF59_RS17970 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) CF59_RS17975 PF01867 CRISPR associated protein Cas1 CF59_RS17985 PF09704 CRISPR-associated protein (Cas_Cas5) CF59_RS17990 PF09344 CT1975-like protein CF59_RS18000 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) CF59_RS18005 PF00270 DEAD/DEAH box helicase CF59_RS18005 PF00271 Helicase conserved C-terminal domain CF59_RS18005 PF18019 HD domain CF59_RS18010 PF01848 Hok/gef family CF59_RS18015 PF01507 Phosphoadenosine phosphosulfate reductase family CF59_RS18020 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CF59_RS18020 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CF59_RS18025 PF00175 Oxidoreductase NAD-binding domain CF59_RS18025 PF00667 FAD binding domain CF59_RS18025 PF00258 Flavodoxin CF59_RS18030 PF01242 6-pyruvoyl tetrahydropterin synthase CF59_RS18035 PF01266 FAD dependent oxidoreductase CF59_RS18045 PF04309 Glycerol-3-phosphate responsive antiterminator CF59_RS18050 PF00766 Electron transfer flavoprotein FAD-binding domain CF59_RS18050 PF01012 Electron transfer flavoprotein domain CF59_RS18055 PF01012 Electron transfer flavoprotein domain CF59_RS18060 PF00083 Sugar (and other) transporter CF59_RS18065 PF01565 FAD binding domain CF59_RS18065 PF02913 FAD linked oxidases, C-terminal domain CF59_RS18075 PF07690 Major Facilitator Superfamily CF59_RS18085 PF04055 Radical SAM superfamily CF59_RS18095 PF04536 TPM domain CF59_RS18100 PF00113 Enolase, C-terminal TIM barrel domain CF59_RS18100 PF03952 Enolase, N-terminal domain CF59_RS18105 PF06418 CTP synthase N-terminus CF59_RS18105 PF00117 Glutamine amidotransferase class-I CF59_RS18110 PF03819 MazG nucleotide pyrophosphohydrolase domain CF59_RS18115 PF13291 ACT domain CF59_RS18115 PF04607 Region found in RelA / SpoT proteins CF59_RS18115 PF02824 TGS domain CF59_RS18120 PF01938 TRAM domain CF59_RS18120 PF05958 tRNA (Uracil-5-)-methyltransferase CF59_RS18125 PF01627 Hpt domain CF59_RS18125 PF00072 Response regulator receiver domain CF59_RS18125 PF00512 His Kinase A (phospho-acceptor) domain CF59_RS18125 PF00672 HAMP domain CF59_RS18125 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CF59_RS18125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS18130 PF13378 Enolase C-terminal domain-like CF59_RS18135 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CF59_RS18135 PF13378 Enolase C-terminal domain-like CF59_RS18140 PF07690 Major Facilitator Superfamily CF59_RS18145 PF00258 Flavodoxin CF59_RS18150 PF00849 RNA pseudouridylate synthase CF59_RS18155 PF04287 tRNA pseudouridine synthase C CF59_RS18165 PF07348 Syd protein (SUKH-2) CF59_RS18170 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CF59_RS18170 PF14489 QueF-like protein CF59_RS18175 PF03641 Possible lysine decarboxylase CF59_RS18175 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CF59_RS18175 PF11892 Domain of unknown function (DUF3412) CF59_RS18185 PF03315 Serine dehydratase beta chain CF59_RS18185 PF03313 Serine dehydratase alpha chain CF59_RS18190 PF01367 5'-3' exonuclease, C-terminal SAM fold CF59_RS18190 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CF59_RS18195 PF00465 Iron-containing alcohol dehydrogenase CF59_RS18200 PF00596 Class II Aldolase and Adducin N-terminal domain CF59_RS18205 PF07690 Major Facilitator Superfamily CF59_RS18210 PF02952 L-fucose isomerase, C-terminal domain CF59_RS18210 PF07881 L-fucose isomerase, first N-terminal domain CF59_RS18210 PF07882 L-fucose isomerase, second N-terminal domain CF59_RS18215 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CF59_RS18215 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CF59_RS18220 PF05025 RbsD / FucU transport protein family CF59_RS18225 PF00455 DeoR C terminal sensor domain CF59_RS18225 PF08220 DeoR-like helix-turn-helix domain CF59_RS18230 PF01728 FtsJ-like methyltransferase CF59_RS18230 PF18125 RlmM ferredoxin-like domain CF59_RS18235 PF04241 Protein of unknown function (DUF423) CF59_RS18240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS18240 PF03466 LysR substrate binding domain CF59_RS18245 PF06004 Bacterial protein of unknown function (DUF903) CF59_RS18250 PF00266 Aminotransferase class-V CF59_RS18255 PF02657 Fe-S metabolism associated domain CF59_RS18260 PF00899 ThiF family CF59_RS18265 PF06725 3D domain CF59_RS18265 PF03562 MltA specific insert domain CF59_RS18285 PF11741 AMIN domain CF59_RS18285 PF01520 N-acetylmuramoyl-L-alanine amidase CF59_RS18290 PF00696 Amino acid kinase family CF59_RS18290 PF00583 Acetyltransferase (GNAT) family CF59_RS18295 PF13538 UvrD-like helicase C-terminal domain CF59_RS18300 PF12705 PD-(D/E)XK nuclease superfamily CF59_RS18300 PF00580 UvrD/REP helicase N-terminal domain CF59_RS18300 PF13361 UvrD-like helicase C-terminal domain CF59_RS18305 PF05193 Peptidase M16 inactive domain CF59_RS18305 PF16187 Middle or third domain of peptidase_M16 CF59_RS18305 PF00675 Insulinase (Peptidase family M16) CF59_RS18310 PF17946 RecC C-terminal domain CF59_RS18315 PF12528 Type II secretion prepilin peptidase dependent protein C CF59_RS18315 PF07963 Prokaryotic N-terminal methylation motif CF59_RS18320 PF10713 Protein of unknown function (DUF2509) CF59_RS18325 PF07963 Prokaryotic N-terminal methylation motif CF59_RS18330 PF07963 Prokaryotic N-terminal methylation motif CF59_RS18335 PF00303 Thymidylate synthase CF59_RS18340 PF01790 Prolipoprotein diacylglyceryl transferase CF59_RS18345 PF05524 PEP-utilising enzyme, N-terminal CF59_RS18345 PF00391 PEP-utilising enzyme, mobile domain CF59_RS18345 PF02896 PEP-utilising enzyme, TIM barrel domain CF59_RS18345 PF01590 GAF domain CF59_RS18350 PF00293 NUDIX domain CF59_RS18365 PF02976 DNA mismatch repair enzyme MutH CF59_RS18370 PF03741 Integral membrane protein TerC family CF59_RS18375 PF06004 Bacterial protein of unknown function (DUF903) CF59_RS18380 PF00248 Aldo/keto reductase family CF59_RS18385 PF07690 Major Facilitator Superfamily CF59_RS18390 PF00501 AMP-binding enzyme CF59_RS18390 PF01553 Acyltransferase CF59_RS18395 PF00356 Bacterial regulatory proteins, lacI family CF59_RS18400 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CF59_RS18400 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CF59_RS18405 PF03466 LysR substrate binding domain CF59_RS18405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS18410 PF01177 Asp/Glu/Hydantoin racemase CF59_RS18415 PF00083 Sugar (and other) transporter CF59_RS18425 PF04962 KduI/IolB family CF59_RS18430 PF00108 Thiolase, N-terminal domain CF59_RS18430 PF02803 Thiolase, C-terminal domain CF59_RS18435 PF03222 Tryptophan/tyrosine permease family CF59_RS18440 PF00196 Bacterial regulatory proteins, luxR family CF59_RS18445 PF00486 Transcriptional regulatory protein, C terminal CF59_RS18485 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) CF59_RS18490 PF01514 Secretory protein of YscJ/FliF family CF59_RS18500 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF CF59_RS18505 PF09480 Type III secretion system protein PrgH-EprH (PrgH) CF59_RS18520 PF01312 FlhB HrpN YscU SpaS Family CF59_RS18525 PF01311 Bacterial export proteins, family 1 CF59_RS18530 PF01313 Bacterial export proteins, family 3 CF59_RS18535 PF00813 FliP family CF59_RS18540 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CF59_RS18555 PF02874 ATP synthase alpha/beta family, beta-barrel domain CF59_RS18555 PF18269 T3SS EscN ATPase C-terminal domain CF59_RS18555 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CF59_RS18560 PF00771 FHIPEP family CF59_RS18565 PF07201 HrpJ-like domain CF59_RS18570 PF03958 Bacterial type II/III secretion system short domain CF59_RS18570 PF00263 Bacterial type II and III secretion system protein CF59_RS18575 PF12833 Helix-turn-helix domain CF59_RS18595 PF07201 HrpJ-like domain CF59_RS18605 PF12833 Helix-turn-helix domain CF59_RS18625 PF01476 LysM domain CF59_RS18625 PF01551 Peptidase family M23 CF59_RS18630 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CF59_RS18630 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CF59_RS18635 PF00941 FAD binding domain in molybdopterin dehydrogenase CF59_RS18635 PF03450 CO dehydrogenase flavoprotein C-terminal domain CF59_RS18640 PF01799 [2Fe-2S] binding domain CF59_RS18640 PF00111 2Fe-2S iron-sulfur cluster binding domain CF59_RS18645 PF00158 Sigma-54 interaction domain CF59_RS18645 PF02954 Bacterial regulatory protein, Fis family CF59_RS18645 PF13188 PAS domain CF59_RS18650 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CF59_RS18650 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CF59_RS18655 PF00291 Pyridoxal-phosphate dependent enzyme CF59_RS18660 PF01546 Peptidase family M20/M25/M40 CF59_RS18660 PF07687 Peptidase dimerisation domain CF59_RS18665 PF01979 Amidohydrolase family CF59_RS18670 PF00696 Amino acid kinase family CF59_RS18675 PF13478 XdhC Rossmann domain CF59_RS18675 PF02625 XdhC and CoxI family CF59_RS18685 PF12804 MobA-like NTP transferase domain CF59_RS18690 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CF59_RS18690 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF59_RS18695 PF01979 Amidohydrolase family CF59_RS18700 PF00941 FAD binding domain in molybdopterin dehydrogenase CF59_RS18705 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CF59_RS18705 PF01799 [2Fe-2S] binding domain CF59_RS18705 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CF59_RS18710 PF00860 Permease family CF59_RS18715 PF01979 Amidohydrolase family CF59_RS18720 PF00860 Permease family CF59_RS18725 PF13247 4Fe-4S dicluster domain CF59_RS18730 PF13247 4Fe-4S dicluster domain CF59_RS18730 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF59_RS18730 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CF59_RS18740 PF00860 Permease family CF59_RS18750 PF00293 NUDIX domain CF59_RS18755 PF01336 OB-fold nucleic acid binding domain CF59_RS18755 PF00152 tRNA synthetases class II (D, K and N) CF59_RS18760 PF03462 PCRF domain CF59_RS18760 PF00472 RF-1 domain CF59_RS18765 PF17768 RecJ OB domain CF59_RS18765 PF01368 DHH family CF59_RS18765 PF02272 DHHA1 domain CF59_RS18770 PF13098 Thioredoxin-like domain CF59_RS18770 PF10411 Disulfide bond isomerase protein N-terminus CF59_RS18775 PF00589 Phage integrase family CF59_RS18775 PF02899 Phage integrase, N-terminal SAM-like domain CF59_RS18780 PF00258 Flavodoxin CF59_RS18785 PF07254 Membrane-bound toxin component of toxin-antitoxin system CF59_RS18790 PF03937 Flavinator of succinate dehydrogenase CF59_RS18795 PF01571 Aminomethyltransferase folate-binding domain CF59_RS18800 PF03006 Haemolysin-III related CF59_RS18805 PF04266 ASCH domain CF59_RS18810 PF00232 Glycosyl hydrolase family 1 CF59_RS18815 PF02347 Glycine cleavage system P-protein CF59_RS18820 PF01597 Glycine cleavage H-protein CF59_RS18825 PF08669 Glycine cleavage T-protein C-terminal barrel domain CF59_RS18825 PF01571 Aminomethyltransferase folate-binding domain CF59_RS18830 PF01494 FAD binding domain CF59_RS18835 PF01494 FAD binding domain CF59_RS18840 PF00557 Metallopeptidase family M24 CF59_RS18840 PF05195 Aminopeptidase P, N-terminal domain CF59_RS18845 PF03695 Uncharacterised protein family (UPF0149) CF59_RS18850 PF05164 Cell division protein ZapA CF59_RS18855 PF01812 5-formyltetrahydrofolate cyclo-ligase family CF59_RS18865 PF01842 ACT domain CF59_RS18865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CF59_RS18865 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CF59_RS18870 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CF59_RS18875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS18875 PF03466 LysR substrate binding domain CF59_RS18880 PF02310 B12 binding domain CF59_RS18880 PF01642 Methylmalonyl-CoA mutase CF59_RS18895 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CF59_RS18895 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CF59_RS18900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS18900 PF03466 LysR substrate binding domain CF59_RS18905 PF04402 Protein of unknown function (DUF541) CF59_RS18910 PF01810 LysE type translocator CF59_RS18915 PF05552 Conserved TM helix CF59_RS18915 PF00924 Mechanosensitive ion channel CF59_RS18920 PF01116 Fructose-bisphosphate aldolase class-II CF59_RS18925 PF00162 Phosphoglycerate kinase CF59_RS18930 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CF59_RS18930 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CF59_RS18940 PF05068 Mannitol repressor CF59_RS18945 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CF59_RS18950 PF00107 Zinc-binding dehydrogenase CF59_RS18950 PF08240 Alcohol dehydrogenase GroES-like domain CF59_RS18955 PF02378 Phosphotransferase system, EIIC CF59_RS18955 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF59_RS18960 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF59_RS18965 PF01145 SPFH domain / Band 7 family CF59_RS18970 PF02780 Transketolase, C-terminal domain CF59_RS18970 PF00456 Transketolase, thiamine diphosphate binding domain CF59_RS18970 PF02779 Transketolase, pyrimidine binding domain CF59_RS18975 PF01435 Peptidase family M48 CF59_RS18990 PF00665 Integrase core domain CF59_RS18990 PF13276 HTH-like domain CF59_RS18990 PF13333 Integrase core domain CF59_RS18995 PF00491 Arginase family CF59_RS19005 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CF59_RS19005 PF17810 Arginine decarboxylase helical bundle domain CF59_RS19005 PF17944 Arginine decarboxylase C-terminal helical extension CF59_RS19010 PF11036 Virulence promoting factor CF59_RS19015 PF17430 Uncharacterized YqgC-like CF59_RS19025 PF02772 S-adenosylmethionine synthetase, central domain CF59_RS19025 PF02773 S-adenosylmethionine synthetase, C-terminal domain CF59_RS19025 PF00438 S-adenosylmethionine synthetase, N-terminal domain CF59_RS19030 PF00083 Sugar (and other) transporter CF59_RS19035 PF17283 SprT-like zinc ribbon domain CF59_RS19035 PF10263 SprT-like family CF59_RS19040 PF04231 Endonuclease I CF59_RS19045 PF04452 RNA methyltransferase CF59_RS19050 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CF59_RS19050 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CF59_RS19055 PF02622 Uncharacterized ACR, COG1678 CF59_RS19060 PF03652 Holliday junction resolvase CF59_RS19065 PF00437 Type II/IV secretion system protein CF59_RS19070 PF01168 Alanine racemase, N-terminal domain CF59_RS19075 PF02325 YGGT family CF59_RS19080 PF02594 Uncharacterised ACR, YggU family COG1872 CF59_RS19085 PF01725 Ham1 family CF59_RS19090 PF04055 Radical SAM superfamily CF59_RS19090 PF06969 HemN C-terminal domain CF59_RS19095 PF03480 Bacterial extracellular solute-binding protein, family 7 CF59_RS19100 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CF59_RS19105 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CF59_RS19110 PF06717 Protein of unknown function (DUF1202) CF59_RS19115 PF17763 Glutaminase/Asparaginase C-terminal domain CF59_RS19115 PF00710 Asparaginase, N-terminal CF59_RS19120 PF11101 Protein of unknown function (DUF2884) CF59_RS19130 PF04320 Protein with unknown function (DUF469) CF59_RS19135 PF02390 Putative methyltransferase CF59_RS19140 PF00633 Helix-hairpin-helix motif CF59_RS19140 PF10576 Iron-sulfur binding domain of endonuclease III CF59_RS19140 PF00730 HhH-GPD superfamily base excision DNA repair protein CF59_RS19140 PF14815 NUDIX domain CF59_RS19145 PF04362 Bacterial Fe(2+) trafficking CF59_RS19150 PF01464 Transglycosylase SLT domain CF59_RS19150 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CF59_RS19155 PF03825 Nucleoside H+ symporter CF59_RS19160 PF01276 Orn/Lys/Arg decarboxylase, major domain CF59_RS19160 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CF59_RS19160 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CF59_RS19165 PF04474 Protein of unknown function (DUF554) CF59_RS19180 PF00571 CBS domain CF59_RS19180 PF01380 SIS domain CF59_RS19190 PF10531 SLBB domain CF59_RS19190 PF02563 Polysaccharide biosynthesis/export protein CF59_RS19195 PF02348 Cytidylyltransferase CF59_RS19200 PF05159 Capsule polysaccharide biosynthesis protein CF59_RS19205 PF05159 Capsule polysaccharide biosynthesis protein CF59_RS19210 PF01061 ABC-2 type transporter CF59_RS19215 PF00005 ABC transporter CF59_RS19225 PF00132 Bacterial transferase hexapeptide (six repeats) CF59_RS19230 PF04612 Type II secretion system (T2SS), protein M CF59_RS19235 PF12693 GspL periplasmic domain CF59_RS19240 PF03934 Type II secretion system (T2SS), protein K CF59_RS19245 PF11612 Type II secretion system (T2SS), protein J CF59_RS19245 PF07963 Prokaryotic N-terminal methylation motif CF59_RS19250 PF07963 Prokaryotic N-terminal methylation motif CF59_RS19250 PF02501 Type II secretion system (T2SS), protein I CF59_RS19255 PF07963 Prokaryotic N-terminal methylation motif CF59_RS19260 PF07963 Prokaryotic N-terminal methylation motif CF59_RS19260 PF08334 Type II secretion system (T2SS), protein G CF59_RS19265 PF00482 Type II secretion system (T2SS), protein F CF59_RS19270 PF00437 Type II/IV secretion system protein CF59_RS19275 PF03958 Bacterial type II/III secretion system short domain CF59_RS19275 PF00263 Bacterial type II and III secretion system protein CF59_RS19280 PF11356 Type II secretion system protein C CF59_RS19285 PF16549 Type II secretion system (T2SS) pilotin, S protein CF59_RS19290 PF06750 Bacterial Peptidase A24 N-terminal domain CF59_RS19290 PF01478 Type IV leader peptidase family CF59_RS19295 PF17291 N-terminal domain of M60-like peptidases CF59_RS19295 PF13322 Domain of unknown function (DUF4092) CF59_RS19295 PF13402 Peptidase M60, enhancin and enhancin-like CF59_RS19305 PF02652 L-lactate permease CF59_RS19310 PF01274 Malate synthase CF59_RS19315 PF03928 Haem-degrading CF59_RS19320 PF02754 Cysteine-rich domain CF59_RS19320 PF13183 4Fe-4S dicluster domain CF59_RS19325 PF01565 FAD binding domain CF59_RS19330 PF01565 FAD binding domain CF59_RS19330 PF02913 FAD linked oxidases, C-terminal domain CF59_RS19335 PF07729 FCD domain CF59_RS19335 PF00392 Bacterial regulatory proteins, gntR family CF59_RS19345 PF14535 AMP-binding enzyme C-terminal domain CF59_RS19345 PF00501 AMP-binding enzyme CF59_RS19355 PF00550 Phosphopantetheine attachment site CF59_RS19360 PF00155 Aminotransferase class I and II CF59_RS19370 PF03739 Lipopolysaccharide export system permease LptF/LptG CF59_RS19375 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CF59_RS19385 PF01943 Polysaccharide biosynthesis protein CF59_RS19405 PF01384 Phosphate transporter family CF59_RS19410 PF05257 CHAP domain CF59_RS19410 PF03738 Glutathionylspermidine synthase preATP-grasp CF59_RS19415 PF02798 Glutathione S-transferase, N-terminal domain CF59_RS19420 PF01455 HupF/HypC family CF59_RS19425 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CF59_RS19430 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE CF59_RS19435 PF01750 Hydrogenase maturation protease CF59_RS19440 PF00374 Nickel-dependent hydrogenase CF59_RS19445 PF03916 Polysulphide reductase, NrfD CF59_RS19450 PF13247 4Fe-4S dicluster domain CF59_RS19455 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CF59_RS19455 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CF59_RS19465 PF11115 Protein of unknown function (DUF2623) CF59_RS19470 PF01738 Dienelactone hydrolase family CF59_RS19475 PF00248 Aldo/keto reductase family CF59_RS19480 PF03350 Uncharacterized protein family, UPF0114 CF59_RS19490 PF02472 Biopolymer transport protein ExbD/TolR CF59_RS19495 PF01618 MotA/TolQ/ExbB proton channel family CF59_RS19505 PF01053 Cys/Met metabolism PLP-dependent enzyme CF59_RS19510 PF09335 SNARE associated Golgi protein CF59_RS19515 PF06719 AraC-type transcriptional regulator N-terminus CF59_RS19515 PF12833 Helix-turn-helix domain CF59_RS19525 PF00465 Iron-containing alcohol dehydrogenase CF59_RS19530 PF00248 Aldo/keto reductase family CF59_RS19535 PF12883 Protein of unknown function (DUF3828) CF59_RS19540 PF04728 Lipoprotein leucine-zipper CF59_RS19545 PF04055 Radical SAM superfamily CF59_RS19545 PF08497 Radical SAM N-terminal CF59_RS19545 PF11842 Domain of unknown function (DUF3362) CF59_RS19550 PF07731 Multicopper oxidase CF59_RS19550 PF07732 Multicopper oxidase CF59_RS19550 PF00394 Multicopper oxidase CF59_RS19555 PF01553 Acyltransferase CF59_RS19560 PF00521 DNA gyrase/topoisomerase IV, subunit A CF59_RS19560 PF03989 DNA gyrase C-terminal domain, beta-propeller CF59_RS19565 PF06445 GyrI-like small molecule binding domain CF59_RS19570 PF04076 Bacterial OB fold (BOF) protein CF59_RS19575 PF00486 Transcriptional regulatory protein, C terminal CF59_RS19575 PF00072 Response regulator receiver domain CF59_RS19580 PF08521 Two-component sensor kinase N-terminal CF59_RS19580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS19580 PF00512 His Kinase A (phospho-acceptor) domain CF59_RS19585 PF10840 Protein of unknown function (DUF2645) CF59_RS19600 PF02525 Flavodoxin-like fold CF59_RS19605 PF03992 Antibiotic biosynthesis monooxygenase CF59_RS19610 PF01380 SIS domain CF59_RS19610 PF01418 Helix-turn-helix domain, rpiR family CF59_RS19620 PF01032 FecCD transport family CF59_RS19625 PF01032 FecCD transport family CF59_RS19630 PF00005 ABC transporter CF59_RS19635 PF07715 TonB-dependent Receptor Plug Domain CF59_RS19640 PF00204 DNA gyrase B CF59_RS19640 PF01751 Toprim domain CF59_RS19640 PF00986 DNA gyrase B subunit, carboxyl terminus CF59_RS19640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS19645 PF05728 Uncharacterised protein family (UPF0227) CF59_RS19650 PF00149 Calcineurin-like phosphoesterase CF59_RS19655 PF06853 Protein of unknown function (DUF1249) CF59_RS19660 PF00293 NUDIX domain CF59_RS19665 PF02321 Outer membrane efflux protein CF59_RS19675 PF06693 Protein of unknown function (DUF1190) CF59_RS19680 PF03738 Glutathionylspermidine synthase preATP-grasp CF59_RS19685 PF05935 Arylsulfotransferase (ASST) CF59_RS19685 PF17425 Arylsulfotransferase Ig-like domain CF59_RS19690 PF01323 DSBA-like thioredoxin domain CF59_RS19700 PF13333 Integrase core domain CF59_RS19700 PF13276 HTH-like domain CF59_RS19700 PF00665 Integrase core domain CF59_RS19705 PF02600 Disulfide bond formation protein DsbB CF59_RS19710 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CF59_RS19715 PF02535 ZIP Zinc transporter CF59_RS19725 PF00419 Fimbrial protein CF59_RS19730 PF13953 PapC C-terminal domain CF59_RS19730 PF13954 PapC N-terminal domain CF59_RS19730 PF00577 Outer membrane usher protein CF59_RS19735 PF02753 Pili assembly chaperone PapD, C-terminal domain CF59_RS19735 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF59_RS19740 PF00419 Fimbrial protein CF59_RS19745 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CF59_RS19750 PF04380 Membrane fusogenic activity CF59_RS19755 PF08971 Glycogen synthesis protein CF59_RS19760 PF07290 Protein of unknown function (DUF1449) CF59_RS19765 PF01145 SPFH domain / Band 7 family CF59_RS19765 PF15975 Flotillin CF59_RS19775 PF00294 pfkB family carbohydrate kinase CF59_RS19775 PF01467 Cytidylyltransferase-like CF59_RS19780 PF03710 Glutamate-ammonia ligase adenylyltransferase CF59_RS19780 PF08335 GlnD PII-uridylyltransferase CF59_RS19785 PF01928 CYTH domain CF59_RS19795 PF08239 Bacterial SH3 domain CF59_RS19800 PF01743 Poly A polymerase head domain CF59_RS19800 PF12627 Probable RNA and SrmB- binding site of polymerase A CF59_RS19800 PF01966 HD domain CF59_RS19805 PF02673 Bacitracin resistance protein BacA CF59_RS19810 PF02152 Dihydroneopterin aldolase CF59_RS19815 PF02660 Glycerol-3-phosphate acyltransferase CF59_RS19820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS19820 PF03466 LysR substrate binding domain CF59_RS19825 PF05681 Fumarate hydratase (Fumerase) CF59_RS19830 PF05683 Fumarase C-terminus CF59_RS19835 PF00939 Sodium:sulfate symporter transmembrane region CF59_RS19840 PF00814 Glycoprotease family CF59_RS19845 PF01165 Ribosomal protein S21 CF59_RS19850 PF08275 DNA primase catalytic core, N-terminal domain CF59_RS19850 PF08278 DNA primase DnaG DnaB-binding CF59_RS19850 PF01807 CHC2 zinc finger CF59_RS19850 PF10410 DnaB-helicase binding domain of primase CF59_RS19855 PF04539 Sigma-70 region 3 CF59_RS19855 PF04542 Sigma-70 region 2 CF59_RS19855 PF00140 Sigma-70 factor, region 1.2 CF59_RS19855 PF03979 Sigma-70 factor, region 1.1 CF59_RS19855 PF04546 Sigma-70, non-essential region CF59_RS19855 PF04545 Sigma-70, region 4 CF59_RS19860 PF03167 Uracil DNA glycosylase superfamily CF59_RS19870 PF04954 Siderophore-interacting protein CF59_RS19870 PF08021 Siderophore-interacting FAD-binding domain CF59_RS19875 PF03551 Transcriptional regulator PadR-like family CF59_RS19880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CF59_RS19880 PF08447 PAS fold CF59_RS19885 PF00202 Aminotransferase class-III CF59_RS19890 PF01588 Putative tRNA binding domain CF59_RS19895 PF00356 Bacterial regulatory proteins, lacI family CF59_RS19900 PF02929 Beta galactosidase small chain CF59_RS19900 PF16353 Domain of unknown function(DUF4981) CF59_RS19900 PF00703 Glycosyl hydrolases family 2 CF59_RS19900 PF02837 Glycosyl hydrolases family 2, sugar binding domain CF59_RS19900 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CF59_RS19905 PF04074 YhcH/YjgK/YiaL CF59_RS19910 PF13520 Amino acid permease CF59_RS19920 PF01204 Trehalase CF59_RS19925 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF59_RS19925 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CF59_RS19930 PF01381 Helix-turn-helix CF59_RS19935 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system CF59_RS19945 PF05175 Methyltransferase small domain CF59_RS19950 PF01863 Protein of unknown function DUF45 CF59_RS19955 PF02698 DUF218 domain CF59_RS19960 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CF59_RS19965 PF03741 Integral membrane protein TerC family CF59_RS19970 PF00375 Sodium:dicarboxylate symporter family CF59_RS19975 PF10688 Bacterial inner membrane protein CF59_RS19980 PF08666 SAF domain CF59_RS19980 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CF59_RS19985 PF02614 Glucuronate isomerase CF59_RS19990 PF07690 Major Facilitator Superfamily CF59_RS19995 PF07729 FCD domain CF59_RS19995 PF00392 Bacterial regulatory proteins, gntR family CF59_RS20000 PF09335 SNARE associated Golgi protein CF59_RS20005 PF13721 SecD export protein N-terminal TM region CF59_RS20010 PF06476 Protein of unknown function (DUF1090) CF59_RS20015 PF05957 Bacterial protein of unknown function (DUF883) CF59_RS20020 PF07332 Putative Actinobacterial Holin-X, holin superfamily III CF59_RS20025 PF13997 YqjK-like protein CF59_RS20030 PF07681 DoxX CF59_RS20035 PF13409 Glutathione S-transferase, N-terminal domain CF59_RS20040 PF01797 Transposase IS200 like CF59_RS20045 PF05656 Protein of unknown function (DUF805) CF59_RS20050 PF05656 Protein of unknown function (DUF805) CF59_RS20055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS20055 PF03466 LysR substrate binding domain CF59_RS20060 PF17954 Quercetinase C-terminal cupin domain CF59_RS20060 PF02678 Pirin CF59_RS20070 PF03313 Serine dehydratase alpha chain CF59_RS20080 PF03313 Serine dehydratase alpha chain CF59_RS20080 PF03315 Serine dehydratase beta chain CF59_RS20085 PF01042 Endoribonuclease L-PSP CF59_RS20090 PF01228 Glycine radical CF59_RS20090 PF02901 Pyruvate formate lyase-like CF59_RS20095 PF00871 Acetokinase family CF59_RS20100 PF03222 Tryptophan/tyrosine permease family CF59_RS20105 PF00291 Pyridoxal-phosphate dependent enzyme CF59_RS20110 PF03466 LysR substrate binding domain CF59_RS20110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS20135 PF02595 Glycerate kinase family CF59_RS20140 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CF59_RS20140 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CF59_RS20145 PF03328 HpcH/HpaI aldolase/citrate lyase family CF59_RS20150 PF07690 Major Facilitator Superfamily CF59_RS20155 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CF59_RS20155 PF08666 SAF domain CF59_RS20160 PF15937 prlF antitoxin for toxin YhaV_toxin CF59_RS20165 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system CF59_RS20170 PF08220 DeoR-like helix-turn-helix domain CF59_RS20170 PF00455 DeoR C terminal sensor domain CF59_RS20175 PF08013 Tagatose 6 phosphate kinase CF59_RS20180 PF03830 PTS system sorbose subfamily IIB component CF59_RS20185 PF03609 PTS system sorbose-specific iic component CF59_RS20190 PF03613 PTS system mannose/fructose/sorbose family IID component CF59_RS20195 PF03610 PTS system fructose IIA component CF59_RS20200 PF01979 Amidohydrolase family CF59_RS20205 PF01380 SIS domain CF59_RS20210 PF01116 Fructose-bisphosphate aldolase class-II CF59_RS20215 PF03830 PTS system sorbose subfamily IIB component CF59_RS20220 PF03609 PTS system sorbose-specific iic component CF59_RS20225 PF03613 PTS system mannose/fructose/sorbose family IID component CF59_RS20230 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CF59_RS20235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CF59_RS20240 PF04348 LppC putative lipoprotein CF59_RS20245 PF02021 Uncharacterised protein family UPF0102 CF59_RS20250 PF13580 SIS domain CF59_RS20255 PF04972 BON domain CF59_RS20260 PF03773 Predicted permease CF59_RS20265 PF13460 NAD(P)H-binding CF59_RS20270 PF01965 DJ-1/PfpI family CF59_RS20280 PF01541 GIY-YIG catalytic domain CF59_RS20285 PF13508 Acetyltransferase (GNAT) domain CF59_RS20290 PF02036 SCP-2 sterol transfer family CF59_RS20295 PF01136 Peptidase family U32 CF59_RS20300 PF01136 Peptidase family U32 CF59_RS20305 PF00296 Luciferase-like monooxygenase CF59_RS20310 PF03222 Tryptophan/tyrosine permease family CF59_RS20320 PF00271 Helicase conserved C-terminal domain CF59_RS20320 PF12343 Cold shock protein DEAD box A CF59_RS20320 PF00270 DEAD/DEAH box helicase CF59_RS20320 PF03880 DbpA RNA binding domain CF59_RS20325 PF07719 Tetratricopeptide repeat CF59_RS20325 PF13181 Tetratricopeptide repeat CF59_RS20330 PF00013 KH domain CF59_RS20330 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CF59_RS20330 PF01138 3' exoribonuclease family, domain 1 CF59_RS20330 PF03725 3' exoribonuclease family, domain 2 CF59_RS20330 PF00575 S1 RNA binding domain CF59_RS20335 PF00312 Ribosomal protein S15 CF59_RS20340 PF09157 Pseudouridine synthase II TruB, C-terminal CF59_RS20340 PF16198 tRNA pseudouridylate synthase B C-terminal domain CF59_RS20340 PF01509 TruB family pseudouridylate synthase (N terminal domain) CF59_RS20345 PF02033 Ribosome-binding factor A CF59_RS20350 PF00009 Elongation factor Tu GTP binding domain CF59_RS20350 PF08364 Bacterial translation initiation factor IF-2 associated region CF59_RS20350 PF11987 Translation-initiation factor 2 CF59_RS20350 PF04760 Translation initiation factor IF-2, N-terminal region CF59_RS20355 PF13184 NusA-like KH domain CF59_RS20355 PF08529 NusA N-terminal domain CF59_RS20355 PF00575 S1 RNA binding domain CF59_RS20360 PF02576 RimP N-terminal domain CF59_RS20360 PF17384 RimP C-terminal SH3 domain CF59_RS20370 PF00764 Arginosuccinate synthase CF59_RS20375 PF00884 Sulfatase CF59_RS20385 PF03840 Preprotein translocase SecG subunit CF59_RS20390 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CF59_RS20390 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CF59_RS20390 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CF59_RS20390 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CF59_RS20395 PF00809 Pterin binding enzyme CF59_RS20400 PF00004 ATPase family associated with various cellular activities (AAA) CF59_RS20400 PF01434 Peptidase family M41 CF59_RS20400 PF06480 FtsH Extracellular CF59_RS20400 PF17862 AAA+ lid domain CF59_RS20405 PF01728 FtsJ-like methyltransferase CF59_RS20410 PF01985 CRS1 / YhbY (CRM) domain CF59_RS20415 PF03449 Transcription elongation factor, N-terminal CF59_RS20415 PF01272 Transcription elongation factor, GreA/GreB, C-term CF59_RS20420 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CF59_RS20425 PF01018 GTP1/OBG CF59_RS20425 PF01926 50S ribosome-binding GTPase CF59_RS20430 PF00892 EamA-like transporter family CF59_RS20435 PF01016 Ribosomal L27 protein CF59_RS20440 PF00829 Ribosomal prokaryotic L21 protein CF59_RS20445 PF00348 Polyprenyl synthetase CF59_RS20450 PF13693 Winged helix-turn-helix DNA-binding CF59_RS20455 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CF59_RS20460 PF01722 BolA-like protein CF59_RS20465 PF13466 STAS domain CF59_RS20470 PF05494 MlaC protein CF59_RS20475 PF02470 MlaD protein CF59_RS20480 PF02405 Permease MlaE CF59_RS20485 PF00005 ABC transporter CF59_RS20490 PF01699 Sodium/calcium exchanger protein CF59_RS20495 PF00571 CBS domain CF59_RS20495 PF01380 SIS domain CF59_RS20505 PF06835 Lipopolysaccharide-assembly, LptC-related CF59_RS20510 PF03968 OstA-like protein CF59_RS20515 PF12399 Branched-chain amino acid ATP-binding cassette transporter CF59_RS20515 PF00005 ABC transporter CF59_RS20520 PF04552 Sigma-54, DNA binding domain CF59_RS20520 PF04963 Sigma-54 factor, core binding domain CF59_RS20520 PF00309 Sigma-54 factor, Activator interacting domain (AID) CF59_RS20525 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CF59_RS20530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF59_RS20535 PF03668 P-loop ATPase protein family CF59_RS20540 PF00381 PTS HPr component phosphorylation site CF59_RS20545 PF10707 PhoP regulatory network protein YrbL CF59_RS20550 PF00912 Transglycosylase CF59_RS20560 PF00989 PAS fold CF59_RS20560 PF00512 His Kinase A (phospho-acceptor) domain CF59_RS20560 PF01627 Hpt domain CF59_RS20560 PF18415 Histidine kinase receptor ArcB trans-membrane domain CF59_RS20560 PF00072 Response regulator receiver domain CF59_RS20560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS20565 PF16199 Radical_SAM C-terminal domain CF59_RS20565 PF04055 Radical SAM superfamily CF59_RS20570 PF00310 Glutamine amidotransferases class-II CF59_RS20570 PF01493 GXGXG motif CF59_RS20570 PF01645 Conserved region in glutamate synthase CF59_RS20570 PF04898 Glutamate synthase central domain CF59_RS20575 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CF59_RS20575 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF59_RS20580 PF17761 DUF1016 N-terminal domain CF59_RS20580 PF06250 YhcG PDDEXK nuclease domain CF59_RS20585 PF04074 YhcH/YjgK/YiaL CF59_RS20590 PF00480 ROK family CF59_RS20595 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CF59_RS20600 PF07690 Major Facilitator Superfamily CF59_RS20605 PF00701 Dihydrodipicolinate synthetase family CF59_RS20610 PF07729 FCD domain CF59_RS20610 PF00392 Bacterial regulatory proteins, gntR family CF59_RS20615 PF03606 C4-dicarboxylate anaerobic carrier CF59_RS20620 PF04386 Stringent starvation protein B CF59_RS20625 PF02798 Glutathione S-transferase, N-terminal domain CF59_RS20625 PF00043 Glutathione S-transferase, C-terminal domain CF59_RS20630 PF00380 Ribosomal protein S9/S16 CF59_RS20635 PF00572 Ribosomal protein L13 CF59_RS20640 PF03969 AFG1-like ATPase CF59_RS20645 PF06295 Protein of unknown function (DUF1043) CF59_RS20650 PF13180 PDZ domain CF59_RS20650 PF00595 PDZ domain CF59_RS20655 PF13180 PDZ domain CF59_RS20660 PF00056 lactate/malate dehydrogenase, NAD binding domain CF59_RS20660 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CF59_RS20665 PF02863 Arginine repressor, C-terminal domain CF59_RS20665 PF01316 Arginine repressor, DNA binding domain CF59_RS20670 PF07338 Protein of unknown function (DUF1471) CF59_RS20675 PF01337 Barstar (barnase inhibitor) CF59_RS20680 PF04632 Fusaric acid resistance protein family CF59_RS20685 PF13533 Biotin-lipoyl like CF59_RS20690 PF07869 Protein of unknown function (DUF1656) CF59_RS20695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS20695 PF03466 LysR substrate binding domain CF59_RS20700 PF01523 Putative modulator of DNA gyrase CF59_RS20705 PF13502 AsmA-like C-terminal region CF59_RS20705 PF13116 Protein of unknown function CF59_RS20710 PF10150 Ribonuclease E/G family CF59_RS20710 PF00575 S1 RNA binding domain CF59_RS20715 PF02545 Maf-like protein CF59_RS20720 PF04093 rod shape-determining protein MreD CF59_RS20725 PF04085 rod shape-determining protein MreC CF59_RS20740 PF17157 Gammaproteobacterial periplasmic sensor domain CF59_RS20740 PF00990 Diguanylate cyclase, GGDEF domain CF59_RS20740 PF00563 EAL domain CF59_RS20745 PF08240 Alcohol dehydrogenase GroES-like domain CF59_RS20745 PF00107 Zinc-binding dehydrogenase CF59_RS20760 PF01794 Ferric reductase like transmembrane component CF59_RS20770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CF59_RS20770 PF02785 Biotin carboxylase C-terminal domain CF59_RS20770 PF00289 Biotin carboxylase, N-terminal domain CF59_RS20775 PF06196 Protein of unknown function (DUF997) CF59_RS20780 PF00474 Sodium:solute symporter family CF59_RS20790 PF01207 Dihydrouridine synthase (Dus) CF59_RS20795 PF02954 Bacterial regulatory protein, Fis family CF59_RS20800 PF01555 DNA methylase CF59_RS20805 PF10831 Protein of unknown function (DUF2556) CF59_RS20810 PF08361 MAATS-type transcriptional repressor, C-terminal region CF59_RS20810 PF00440 Bacterial regulatory proteins, tetR family CF59_RS20815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF59_RS20815 PF00529 HlyD membrane-fusion protein of T1SS CF59_RS20820 PF00873 AcrB/AcrD/AcrF family CF59_RS20840 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF59_RS20845 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS20850 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS20855 PF00005 ABC transporter CF59_RS20895 PF00132 Bacterial transferase hexapeptide (six repeats) CF59_RS20900 PF07369 Protein of unknown function (DUF1488) CF59_RS20905 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CF59_RS20905 PF08501 Shikimate dehydrogenase substrate binding domain CF59_RS20905 PF01488 Shikimate / quinate 5-dehydrogenase CF59_RS20910 PF01300 Telomere recombination CF59_RS20915 PF01396 Topoisomerase DNA binding C4 zinc finger CF59_RS20920 PF04361 Protein of unknown function (DUF494) CF59_RS20925 PF17782 DprA winged helix domain CF59_RS20925 PF02481 DNA recombination-mediator protein A CF59_RS20930 PF01327 Polypeptide deformylase CF59_RS20935 PF00551 Formyl transferase CF59_RS20935 PF02911 Formyl transferase, C-terminal domain CF59_RS20940 PF01189 16S rRNA methyltransferase RsmB/F CF59_RS20940 PF01029 NusB family CF59_RS20945 PF02254 TrkA-N domain CF59_RS20945 PF02080 TrkA-C domain CF59_RS20950 PF01741 Large-conductance mechanosensitive channel, MscL CF59_RS20955 PF03889 Alternative ribosome-rescue factor A CF59_RS20960 PF13411 MerR HTH family regulatory protein CF59_RS20965 PF09350 Domain of unknown function (DUF1992) CF59_RS20970 PF01196 Ribosomal protein L17 CF59_RS20975 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CF59_RS20975 PF01000 RNA polymerase Rpb3/RpoA insert domain CF59_RS20975 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CF59_RS20980 PF00163 Ribosomal protein S4/S9 N-terminal domain CF59_RS20980 PF01479 S4 domain CF59_RS20985 PF00411 Ribosomal protein S11 CF59_RS20990 PF00416 Ribosomal protein S13/S18 CF59_RS20995 PF00444 Ribosomal protein L36 CF59_RS21000 PF00344 SecY translocase CF59_RS21005 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CF59_RS21010 PF00327 Ribosomal protein L30p/L7e CF59_RS21015 PF03719 Ribosomal protein S5, C-terminal domain CF59_RS21015 PF00333 Ribosomal protein S5, N-terminal domain CF59_RS21020 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CF59_RS21025 PF00347 Ribosomal protein L6 CF59_RS21030 PF00410 Ribosomal protein S8 CF59_RS21035 PF00253 Ribosomal protein S14p/S29e CF59_RS21040 PF00281 Ribosomal protein L5 CF59_RS21040 PF00673 ribosomal L5P family C-terminus CF59_RS21045 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CF59_RS21045 PF00467 KOW motif CF59_RS21050 PF00238 Ribosomal protein L14p/L23e CF59_RS21055 PF00366 Ribosomal protein S17 CF59_RS21060 PF00831 Ribosomal L29 protein CF59_RS21065 PF00252 Ribosomal protein L16p/L10e CF59_RS21070 PF00189 Ribosomal protein S3, C-terminal domain CF59_RS21070 PF07650 KH domain CF59_RS21075 PF00237 Ribosomal protein L22p/L17e CF59_RS21080 PF00203 Ribosomal protein S19 CF59_RS21085 PF03947 Ribosomal Proteins L2, C-terminal domain CF59_RS21085 PF00181 Ribosomal Proteins L2, RNA binding domain CF59_RS21090 PF00276 Ribosomal protein L23 CF59_RS21095 PF00573 Ribosomal protein L4/L1 family CF59_RS21100 PF00297 Ribosomal protein L3 CF59_RS21105 PF00338 Ribosomal protein S10p/S20e CF59_RS21115 PF01478 Type IV leader peptidase family CF59_RS21120 PF00210 Ferritin-like domain CF59_RS21125 PF04324 BFD-like [2Fe-2S] binding domain CF59_RS21130 PF03143 Elongation factor Tu C-terminal domain CF59_RS21130 PF00009 Elongation factor Tu GTP binding domain CF59_RS21130 PF03144 Elongation factor Tu domain 2 CF59_RS21135 PF03764 Elongation factor G, domain IV CF59_RS21135 PF14492 Elongation Factor G, domain II CF59_RS21135 PF00009 Elongation factor Tu GTP binding domain CF59_RS21135 PF03144 Elongation factor Tu domain 2 CF59_RS21135 PF00679 Elongation factor G C-terminus CF59_RS21140 PF00177 Ribosomal protein S7p/S5e CF59_RS21145 PF00164 Ribosomal protein S12/S23 CF59_RS21150 PF04077 DsrH like protein CF59_RS21155 PF02635 DsrE/DsrF-like family CF59_RS21160 PF02635 DsrE/DsrF-like family CF59_RS21165 PF08348 YheO-like PAS domain CF59_RS21165 PF13309 HTH domain CF59_RS21170 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CF59_RS21170 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CF59_RS21175 PF04102 SlyX CF59_RS21180 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CF59_RS21185 PF09526 Probable metal-binding protein (DUF2387) CF59_RS21190 PF02254 TrkA-N domain CF59_RS21190 PF00999 Sodium/hydrogen exchanger family CF59_RS21195 PF02525 Flavodoxin-like fold CF59_RS21200 PF12848 ABC transporter CF59_RS21200 PF00005 ABC transporter CF59_RS21205 PF00561 alpha/beta hydrolase fold CF59_RS21210 PF06794 Uncharacterised protein family (UPF0270) CF59_RS21215 PF00485 Phosphoribulokinase / Uridine kinase family CF59_RS21220 PF02566 OsmC-like protein CF59_RS21230 PF13545 Crp-like helix-turn-helix domain CF59_RS21230 PF00027 Cyclic nucleotide-binding domain CF59_RS21235 PF12805 FUSC-like inner membrane protein yccS CF59_RS21240 PF00202 Aminotransferase class-III CF59_RS21245 PF00117 Glutamine amidotransferase class-I CF59_RS21250 PF02661 Fic/DOC family CF59_RS21255 PF10832 Protein of unknown function (DUF2559) CF59_RS21260 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CF59_RS21265 PF07690 Major Facilitator Superfamily CF59_RS21270 PF04324 BFD-like [2Fe-2S] binding domain CF59_RS21270 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CF59_RS21270 PF18267 Rubredoxin NAD+ reductase C-terminal domain CF59_RS21270 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF59_RS21270 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CF59_RS21275 PF13806 Rieske-like [2Fe-2S] domain CF59_RS21280 PF01226 Formate/nitrite transporter CF59_RS21285 PF10414 Sirohaem synthase dimerisation region CF59_RS21285 PF14824 Sirohaem biosynthesis protein central CF59_RS21285 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CF59_RS21290 PF13978 Protein of unknown function (DUF4223) CF59_RS21295 PF00155 Aminotransferase class I and II CF59_RS21300 PF10797 Protein of unknown function CF59_RS21305 PF10941 Protein of unknown function DUF2620 CF59_RS21310 PF02126 Phosphotriesterase family CF59_RS21315 PF01676 Metalloenzyme superfamily CF59_RS21320 PF01168 Alanine racemase, N-terminal domain CF59_RS21330 PF14502 Helix-turn-helix domain CF59_RS21330 PF14503 YhfZ C-terminal domain CF59_RS21335 PF00579 tRNA synthetases class I (W and Y) CF59_RS21340 PF13419 Haloacid dehalogenase-like hydrolase CF59_RS21345 PF00834 Ribulose-phosphate 3 epimerase family CF59_RS21350 PF02086 D12 class N6 adenine-specific DNA methyltransferase CF59_RS21355 PF05036 Sporulation related domain CF59_RS21360 PF01761 3-dehydroquinate synthase CF59_RS21365 PF01202 Shikimate kinase CF59_RS21370 PF03958 Bacterial type II/III secretion system short domain CF59_RS21370 PF00263 Bacterial type II and III secretion system protein CF59_RS21375 PF10748 DNA utilization proteins HofP CF59_RS21385 PF05137 Fimbrial assembly protein (PilN) CF59_RS21395 PF00912 Transglycosylase CF59_RS21395 PF00905 Penicillin binding protein transpeptidase domain CF59_RS21395 PF17092 Penicillin-binding protein OB-like domain CF59_RS21400 PF00293 NUDIX domain CF59_RS21405 PF07095 Intracellular growth attenuator protein IgaA CF59_RS21410 PF13419 Haloacid dehalogenase-like hydrolase CF59_RS21415 PF01479 S4 domain CF59_RS21420 PF01430 Hsp33 protein CF59_RS21425 PF13687 Domain of unknown function (DUF4153) CF59_RS21435 PF01293 Phosphoenolpyruvate carboxykinase CF59_RS21440 PF00512 His Kinase A (phospho-acceptor) domain CF59_RS21440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS21440 PF00672 HAMP domain CF59_RS21445 PF00486 Transcriptional regulatory protein, C terminal CF59_RS21445 PF00072 Response regulator receiver domain CF59_RS21450 PF03449 Transcription elongation factor, N-terminal CF59_RS21450 PF01272 Transcription elongation factor, GreA/GreB, C-term CF59_RS21455 PF17674 HHH domain CF59_RS21455 PF00575 S1 RNA binding domain CF59_RS21455 PF09371 Tex-like protein N-terminal domain CF59_RS21455 PF16921 Tex protein YqgF-like domain CF59_RS21460 PF04023 FeoA domain CF59_RS21465 PF17910 FeoB cytosolic helical domain CF59_RS21465 PF07670 Nucleoside recognition CF59_RS21465 PF07664 Ferrous iron transport protein B C terminus CF59_RS21465 PF02421 Ferrous iron transport protein B CF59_RS21470 PF09012 FeoC like transcriptional regulator CF59_RS21475 PF04754 Putative transposase, YhgA-like CF59_RS21480 PF00561 alpha/beta hydrolase fold CF59_RS21485 PF00156 Phosphoribosyl transferase domain CF59_RS21490 PF01106 NifU-like domain CF59_RS21490 PF01521 Iron-sulphur cluster biosynthesis CF59_RS21495 PF02447 GntP family permease CF59_RS21500 PF02446 4-alpha-glucanotransferase CF59_RS21505 PF00343 Carbohydrate phosphorylase CF59_RS21510 PF17874 MalT-like TPR region CF59_RS21510 PF00196 Bacterial regulatory proteins, luxR family CF59_RS21515 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain CF59_RS21515 PF01137 RNA 3'-terminal phosphate cyclase CF59_RS21520 PF01139 tRNA-splicing ligase RtcB CF59_RS21525 PF06956 Regulator of RNA terminal phosphate cyclase CF59_RS21525 PF00158 Sigma-54 interaction domain CF59_RS21530 PF08220 DeoR-like helix-turn-helix domain CF59_RS21530 PF00455 DeoR C terminal sensor domain CF59_RS21535 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CF59_RS21535 PF01694 Rhomboid family CF59_RS21540 PF00581 Rhodanese-like domain CF59_RS21545 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CF59_RS21545 PF01266 FAD dependent oxidoreductase CF59_RS21565 PF00419 Fimbrial protein CF59_RS21570 PF13954 PapC N-terminal domain CF59_RS21570 PF00577 Outer membrane usher protein CF59_RS21570 PF13953 PapC C-terminal domain CF59_RS21575 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF59_RS21575 PF02753 Pili assembly chaperone PapD, C-terminal domain CF59_RS21585 PF00343 Carbohydrate phosphorylase CF59_RS21590 PF08323 Starch synthase catalytic domain CF59_RS21590 PF00534 Glycosyl transferases group 1 CF59_RS21595 PF00483 Nucleotidyl transferase CF59_RS21600 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CF59_RS21600 PF18390 Glycogen debranching enzyme C-terminal domain CF59_RS21600 PF00128 Alpha amylase, catalytic domain CF59_RS21605 PF02806 Alpha amylase, C-terminal all-beta domain CF59_RS21605 PF00128 Alpha amylase, catalytic domain CF59_RS21605 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CF59_RS21610 PF01118 Semialdehyde dehydrogenase, NAD binding domain CF59_RS21610 PF02774 Semialdehyde dehydrogenase, dimerisation domain CF59_RS21615 PF01914 MarC family integral membrane protein CF59_RS21620 PF02447 GntP family permease CF59_RS21625 PF01202 Shikimate kinase CF59_RS21630 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CF59_RS21630 PF00356 Bacterial regulatory proteins, lacI family CF59_RS21635 PF02678 Pirin CF59_RS21635 PF17954 Quercetinase C-terminal cupin domain CF59_RS21640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CF59_RS21640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CF59_RS21650 PF00583 Acetyltransferase (GNAT) family CF59_RS21655 PF05638 Type VI secretion system effector, Hcp CF59_RS21665 PF15567 Immunity protein 35 CF59_RS21675 PF10956 Protein of unknown function (DUF2756) CF59_RS21680 PF03009 Glycerophosphoryl diester phosphodiesterase family CF59_RS21685 PF17912 MalK OB fold domain CF59_RS21685 PF00005 ABC transporter CF59_RS21690 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS21695 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS21700 PF13416 Bacterial extracellular solute-binding protein CF59_RS21710 PF00005 ABC transporter CF59_RS21715 PF00005 ABC transporter CF59_RS21715 PF12399 Branched-chain amino acid ATP-binding cassette transporter CF59_RS21720 PF02653 Branched-chain amino acid transport system / permease component CF59_RS21720 PF11862 Domain of unknown function (DUF3382) CF59_RS21725 PF02653 Branched-chain amino acid transport system / permease component CF59_RS21730 PF13458 Periplasmic binding protein CF59_RS21735 PF12568 Acetyltransferase (GNAT) domain, PanZ CF59_RS21745 PF13458 Periplasmic binding protein CF59_RS21750 PF04545 Sigma-70, region 4 CF59_RS21750 PF04542 Sigma-70 region 2 CF59_RS21755 PF18075 FtsX extracellular domain CF59_RS21755 PF02687 FtsX-like permease family CF59_RS21760 PF00005 ABC transporter CF59_RS21765 PF02881 SRP54-type protein, helical bundle domain CF59_RS21765 PF00448 SRP54-type protein, GTPase domain CF59_RS21775 PF06611 Protein of unknown function (DUF1145) CF59_RS21780 PF10694 Protein of unknown function (DUF2500) CF59_RS21785 PF07947 YhhN family CF59_RS21790 PF00403 Heavy-metal-associated domain CF59_RS21795 PF01206 Sulfurtransferase TusA CF59_RS21800 PF02592 Putative vitamin uptake transporter CF59_RS21805 PF08786 DcrB CF59_RS21810 PF07690 Major Facilitator Superfamily CF59_RS21815 PF01594 AI-2E family transporter CF59_RS21820 PF01648 4'-phosphopantetheinyl transferase superfamily CF59_RS21825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF59_RS21830 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS21835 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS21840 PF00005 ABC transporter CF59_RS21845 PF00005 ABC transporter CF59_RS21850 PF01402 Ribbon-helix-helix protein, copG family CF59_RS21850 PF08753 NikR C terminal nickel binding domain CF59_RS21855 PF05593 RHS Repeat CF59_RS21855 PF03527 RHS protein CF59_RS21875 PF14220 Domain of unknown function (DUF4329) CF59_RS21875 PF03527 RHS protein CF59_RS21875 PF05593 RHS Repeat CF59_RS21880 PF15631 NTF2 fold immunity protein CF59_RS21885 PF03130 PBS lyase HEAT-like repeat CF59_RS21890 PF03527 RHS protein CF59_RS21900 PF13808 DDE_Tnp_1-associated CF59_RS21900 PF01609 Transposase DDE domain CF59_RS21910 PF00005 ABC transporter CF59_RS21915 PF13533 Biotin-lipoyl like CF59_RS21920 PF13258 Domain of unknown function (DUF4049) CF59_RS21925 PF13258 Domain of unknown function (DUF4049) CF59_RS21940 PF10951 Protein of unknown function (DUF2776) CF59_RS21950 PF01384 Phosphate transporter family CF59_RS21955 PF10625 Universal stress protein B (UspB) CF59_RS21960 PF00582 Universal stress protein family CF59_RS21965 PF00854 POT family CF59_RS21970 PF04445 Putative SAM-dependent methyltransferase CF59_RS21975 PF01432 Peptidase family M3 CF59_RS21980 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CF59_RS21985 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CF59_RS21985 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF59_RS22000 PF01022 Bacterial regulatory protein, arsR family CF59_RS22005 PF02040 Arsenical pump membrane protein CF59_RS22010 PF03960 ArsC family CF59_RS22030 PF03843 Outer membrane lipoprotein Slp family CF59_RS22035 PF00196 Bacterial regulatory proteins, luxR family CF59_RS22040 PF05171 Haemin-degrading HemS.ChuX domain CF59_RS22045 PF07715 TonB-dependent Receptor Plug Domain CF59_RS22045 PF00593 TonB dependent receptor CF59_RS22050 PF01497 Periplasmic binding protein CF59_RS22055 PF04055 Radical SAM superfamily CF59_RS22060 PF06228 Haem utilisation ChuX/HutX CF59_RS22070 PF01032 FecCD transport family CF59_RS22075 PF00005 ABC transporter CF59_RS22080 PF02308 MgtC family CF59_RS22085 PF06411 HdeA/HdeB family CF59_RS22090 PF06411 HdeA/HdeB family CF59_RS22095 PF03729 Short repeat of unknown function (DUF308) CF59_RS22100 PF00196 Bacterial regulatory proteins, luxR family CF59_RS22110 PF00529 HlyD membrane-fusion protein of T1SS CF59_RS22110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF59_RS22115 PF00873 AcrB/AcrD/AcrF family CF59_RS22120 PF12833 Helix-turn-helix domain CF59_RS22125 PF12833 Helix-turn-helix domain CF59_RS22130 PF00282 Pyridoxal-dependent decarboxylase conserved domain CF59_RS22135 PF03150 Di-haem cytochrome c peroxidase CF59_RS22135 PF14376 Haem-binding domain CF59_RS22135 PF00034 Cytochrome c CF59_RS22140 PF01204 Trehalase CF59_RS22145 PF00196 Bacterial regulatory proteins, luxR family CF59_RS22150 PF03466 LysR substrate binding domain CF59_RS22150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS22155 PF03631 Virulence factor BrkB CF59_RS22160 PF00083 Sugar (and other) transporter CF59_RS22160 PF07690 Major Facilitator Superfamily CF59_RS22165 PF05170 AsmA family CF59_RS22170 PF00563 EAL domain CF59_RS22180 PF00294 pfkB family carbohydrate kinase CF59_RS22185 PF00675 Insulinase (Peptidase family M16) CF59_RS22185 PF05193 Peptidase M16 inactive domain CF59_RS22190 PF00375 Sodium:dicarboxylate symporter family CF59_RS22195 PF00990 Diguanylate cyclase, GGDEF domain CF59_RS22195 PF00563 EAL domain CF59_RS22195 PF00672 HAMP domain CF59_RS22195 PF17154 Gammaproteobacterial periplasmic sensor domain CF59_RS22200 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CF59_RS22205 PF01270 Glycosyl hydrolases family 8 CF59_RS22210 PF03170 Bacterial cellulose synthase subunit CF59_RS22215 PF07238 PilZ domain CF59_RS22215 PF00535 Glycosyl transferase family 2 CF59_RS22215 PF03552 Cellulose synthase CF59_RS22220 PF06564 Cellulose biosynthesis protein BcsQ CF59_RS22225 PF10945 Cellulose biosynthesis protein BcsR CF59_RS22230 PF10995 Cellulose biosynthesis GIL CF59_RS22235 PF11120 Cellulose biosynthesis protein BcsF CF59_RS22240 PF11658 Cellulose biosynthesis protein BcsG CF59_RS22245 PF13940 Toxin Ldr, type I toxin-antitoxin system CF59_RS22260 PF03222 Tryptophan/tyrosine permease family CF59_RS22265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF59_RS22265 PF00005 ABC transporter CF59_RS22270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF59_RS22270 PF00005 ABC transporter CF59_RS22275 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS22275 PF12911 N-terminal TM domain of oligopeptide transport permease C CF59_RS22280 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS22290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF59_RS22305 PF08019 Phosphoethanolamine transferase EptA/EptB CF59_RS22305 PF00884 Sulfatase CF59_RS22310 PF07690 Major Facilitator Superfamily CF59_RS22315 PF03797 Autotransporter beta-domain CF59_RS22320 PF03352 Methyladenine glycosylase CF59_RS22325 PF00583 Acetyltransferase (GNAT) family CF59_RS22330 PF18364 Molybdopterin oxidoreductase N-terminal domain CF59_RS22330 PF01568 Molydopterin dinucleotide binding domain CF59_RS22330 PF00384 Molybdopterin oxidoreductase CF59_RS22335 PF00691 OmpA family CF59_RS22335 PF13488 Glycine zipper CF59_RS22340 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CF59_RS22340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CF59_RS22345 PF11254 Protein of unknown function (DUF3053) CF59_RS22350 PF01381 Helix-turn-helix CF59_RS22355 PF00313 'Cold-shock' DNA-binding domain CF59_RS22360 PF01848 Hok/gef family CF59_RS22365 PF13276 HTH-like domain CF59_RS22365 PF00665 Integrase core domain CF59_RS22365 PF13333 Integrase core domain CF59_RS22375 PF05746 DALR anticodon binding domain CF59_RS22375 PF02092 Glycyl-tRNA synthetase beta subunit CF59_RS22380 PF02091 Glycyl-tRNA synthetase alpha subunit CF59_RS22385 PF13983 YsaB-like lipoprotein CF59_RS22390 PF01757 Acyltransferase family CF59_RS22395 PF05360 yiaA/B two helix domain CF59_RS22400 PF05360 yiaA/B two helix domain CF59_RS22405 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CF59_RS22405 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CF59_RS22415 PF13407 Periplasmic binding protein domain CF59_RS22420 PF00005 ABC transporter CF59_RS22425 PF02653 Branched-chain amino acid transport system / permease component CF59_RS22430 PF12833 Helix-turn-helix domain CF59_RS22435 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CF59_RS22440 PF00128 Alpha amylase, catalytic domain CF59_RS22445 PF00155 Aminotransferase class I and II CF59_RS22455 PF13247 4Fe-4S dicluster domain CF59_RS22460 PF09339 IclR helix-turn-helix domain CF59_RS22460 PF01614 Bacterial transcriptional regulator CF59_RS22465 PF02615 Malate/L-lactate dehydrogenase CF59_RS22470 PF04074 YhcH/YjgK/YiaL CF59_RS22475 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CF59_RS22480 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CF59_RS22485 PF03480 Bacterial extracellular solute-binding protein, family 7 CF59_RS22490 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CF59_RS22490 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CF59_RS22495 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CF59_RS22500 PF01261 Xylose isomerase-like TIM barrel CF59_RS22505 PF00596 Class II Aldolase and Adducin N-terminal domain CF59_RS22520 PF07944 Beta-L-arabinofuranosidase, GH127 CF59_RS22545 PF00171 Aldehyde dehydrogenase family CF59_RS22555 PF00465 Iron-containing alcohol dehydrogenase CF59_RS22560 PF00009 Elongation factor Tu GTP binding domain CF59_RS22560 PF09106 Elongation factor SelB, winged helix CF59_RS22560 PF09107 Elongation factor SelB, winged helix CF59_RS22560 PF03144 Elongation factor Tu domain 2 CF59_RS22565 PF12390 Selenocysteine synthase N terminal CF59_RS22565 PF03841 L-seryl-tRNA selenium transferase CF59_RS22570 PF00043 Glutathione S-transferase, C-terminal domain CF59_RS22570 PF13417 Glutathione S-transferase, N-terminal domain CF59_RS22585 PF15596 Immunity protein 57 CF59_RS22590 PF00529 HlyD membrane-fusion protein of T1SS CF59_RS22590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF59_RS22595 PF11742 Protein of unknown function (DUF3302) CF59_RS22600 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF59_RS22600 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF59_RS22600 PF02378 Phosphotransferase system, EIIC CF59_RS22605 PF08125 Mannitol dehydrogenase C-terminal domain CF59_RS22605 PF01232 Mannitol dehydrogenase Rossmann domain CF59_RS22610 PF05068 Mannitol repressor CF59_RS22620 PF10928 Protein of unknown function (DUF2810) CF59_RS22625 PF11622 Protein of unknown function (DUF3251) CF59_RS22630 PF13018 Extended Signal Peptide of Type V secretion system CF59_RS22630 PF05662 Coiled stalk of trimeric autotransporter adhesin CF59_RS22630 PF03895 YadA-like membrane anchor domain CF59_RS22630 PF05658 Head domain of trimeric autotransporter adhesin CF59_RS22635 PF02652 L-lactate permease CF59_RS22640 PF00392 Bacterial regulatory proteins, gntR family CF59_RS22640 PF07729 FCD domain CF59_RS22645 PF01070 FMN-dependent dehydrogenase CF59_RS22650 PF00588 SpoU rRNA Methylase family CF59_RS22655 PF06426 Serine acetyltransferase, N-terminal CF59_RS22655 PF00132 Bacterial transferase hexapeptide (six repeats) CF59_RS22660 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CF59_RS22660 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CF59_RS22665 PF02556 Preprotein translocase subunit SecB CF59_RS22670 PF00462 Glutaredoxin CF59_RS22675 PF00581 Rhodanese-like domain CF59_RS22680 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CF59_RS22680 PF01676 Metalloenzyme superfamily CF59_RS22685 PF01551 Peptidase family M23 CF59_RS22690 PF04748 Divergent polysaccharide deacetylase CF59_RS22695 PF00535 Glycosyl transferase family 2 CF59_RS22700 PF00107 Zinc-binding dehydrogenase CF59_RS22700 PF08240 Alcohol dehydrogenase GroES-like domain CF59_RS22705 PF00155 Aminotransferase class I and II CF59_RS22710 PF01370 NAD dependent epimerase/dehydratase family CF59_RS22715 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CF59_RS22720 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CF59_RS22735 PF08437 Glycosyl transferase family 8 C-terminal CF59_RS22735 PF01501 Glycosyl transferase family 8 CF59_RS22740 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) CF59_RS22745 PF08437 Glycosyl transferase family 8 C-terminal CF59_RS22745 PF01501 Glycosyl transferase family 8 CF59_RS22750 PF08437 Glycosyl transferase family 8 C-terminal CF59_RS22750 PF01501 Glycosyl transferase family 8 CF59_RS22760 PF13439 Glycosyltransferase Family 4 CF59_RS22760 PF00534 Glycosyl transferases group 1 CF59_RS22765 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CF59_RS22770 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CF59_RS22775 PF01467 Cytidylyltransferase-like CF59_RS22780 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CF59_RS22780 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CF59_RS22780 PF06827 Zinc finger found in FPG and IleRS CF59_RS22785 PF00471 Ribosomal protein L33 CF59_RS22790 PF00830 Ribosomal L28 family CF59_RS22795 PF04002 RadC-like JAB domain CF59_RS22800 PF02441 Flavoprotein CF59_RS22800 PF04127 DNA / pantothenate metabolism flavoprotein CF59_RS22805 PF00692 dUTPase CF59_RS22810 PF00440 Bacterial regulatory proteins, tetR family CF59_RS22815 PF00156 Phosphoribosyl transferase domain CF59_RS22820 PF03725 3' exoribonuclease family, domain 2 CF59_RS22820 PF01138 3' exoribonuclease family, domain 1 CF59_RS22825 PF03755 YicC-like family, N-terminal region CF59_RS22825 PF08340 Domain of unknown function (DUF1732) CF59_RS22835 PF03458 UPF0126 domain CF59_RS22840 PF03120 NAD-dependent DNA ligase OB-fold domain CF59_RS22840 PF01653 NAD-dependent DNA ligase adenylation domain CF59_RS22845 PF00625 Guanylate kinase CF59_RS22850 PF01192 RNA polymerase Rpb6 CF59_RS22855 PF02824 TGS domain CF59_RS22855 PF13291 ACT domain CF59_RS22855 PF04607 Region found in RelA / SpoT proteins CF59_RS22860 PF00588 SpoU rRNA Methylase family CF59_RS22860 PF12105 SpoU, rRNA methylase, C-terminal CF59_RS22865 PF17191 RecG wedge domain CF59_RS22865 PF00271 Helicase conserved C-terminal domain CF59_RS22865 PF00270 DEAD/DEAH box helicase CF59_RS22875 PF03616 Sodium/glutamate symporter CF59_RS22880 PF00860 Permease family CF59_RS22885 PF05170 AsmA family CF59_RS22890 PF01055 Glycosyl hydrolases family 31 CF59_RS22890 PF13802 Galactose mutarotase-like CF59_RS22905 PF14659 Phage integrase, N-terminal SAM-like domain CF59_RS22905 PF13356 Arm DNA-binding domain CF59_RS22905 PF00589 Phage integrase family CF59_RS22950 PF17345 Family of unknown function (DUF5375) CF59_RS22965 PF07690 Major Facilitator Superfamily CF59_RS22970 PF00892 EamA-like transporter family CF59_RS22975 PF03180 NLPA lipoprotein CF59_RS22990 PF07690 Major Facilitator Superfamily CF59_RS22995 PF06711 Protein of unknown function (DUF1198) CF59_RS23000 PF00860 Permease family CF59_RS23005 PF13382 Adenine deaminase C-terminal domain CF59_RS23005 PF01979 Amidohydrolase family CF59_RS23010 PF07690 Major Facilitator Superfamily CF59_RS23015 PF07690 Major Facilitator Superfamily CF59_RS23020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS23020 PF07730 Histidine kinase CF59_RS23020 PF05231 MASE1 CF59_RS23025 PF00196 Bacterial regulatory proteins, luxR family CF59_RS23025 PF00072 Response regulator receiver domain CF59_RS23045 PF01842 ACT domain CF59_RS23050 PF00205 Thiamine pyrophosphate enzyme, central domain CF59_RS23050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CF59_RS23050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CF59_RS23055 PF08049 IlvB leader peptide CF59_RS23070 PF13939 Toxin TisB, type I toxin-antitoxin system CF59_RS23075 PF07690 Major Facilitator Superfamily CF59_RS23085 PF02656 Domain of unknown function (DUF202) CF59_RS23090 PF02656 Domain of unknown function (DUF202) CF59_RS23095 PF16347 Domain of unknown function (DUF4976) CF59_RS23095 PF00884 Sulfatase CF59_RS23100 PF00474 Sodium:solute symporter family CF59_RS23105 PF12833 Helix-turn-helix domain CF59_RS23105 PF02311 AraC-like ligand binding domain CF59_RS23110 PF02056 Family 4 glycosyl hydrolase CF59_RS23110 PF11975 Family 4 glycosyl hydrolase C-terminal domain CF59_RS23115 PF02378 Phosphotransferase system, EIIC CF59_RS23115 PF00367 phosphotransferase system, EIIB CF59_RS23120 PF00392 Bacterial regulatory proteins, gntR family CF59_RS23120 PF07702 UTRA domain CF59_RS23125 PF06826 Predicted Permease Membrane Region CF59_RS23125 PF02080 TrkA-C domain CF59_RS23135 PF00011 Hsp20/alpha crystallin family CF59_RS23140 PF00011 Hsp20/alpha crystallin family CF59_RS23145 PF07119 Protein of unknown function (DUF1375) CF59_RS23150 PF12566 Protein of unknown function (DUF3748) CF59_RS23150 PF07676 WD40-like Beta Propeller Repeat CF59_RS23155 PF01494 FAD binding domain CF59_RS23160 PF07690 Major Facilitator Superfamily CF59_RS23165 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CF59_RS23165 PF13378 Enolase C-terminal domain-like CF59_RS23170 PF01081 KDPG and KHG aldolase CF59_RS23175 PF05035 2-keto-3-deoxy-galactonokinase CF59_RS23180 PF07729 FCD domain CF59_RS23180 PF00392 Bacterial regulatory proteins, gntR family CF59_RS23195 PF06078 Bacterial protein of unknown function (DUF937) CF59_RS23200 PF00204 DNA gyrase B CF59_RS23200 PF00986 DNA gyrase B subunit, carboxyl terminus CF59_RS23200 PF18053 DNA gyrase B subunit insert domain CF59_RS23200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF59_RS23200 PF01751 Toprim domain CF59_RS23205 PF02463 RecF/RecN/SMC N terminal domain CF59_RS23210 PF00712 DNA polymerase III beta subunit, N-terminal domain CF59_RS23210 PF02768 DNA polymerase III beta subunit, C-terminal domain CF59_RS23210 PF02767 DNA polymerase III beta subunit, central domain CF59_RS23215 PF11638 DnaA N-terminal domain CF59_RS23215 PF08299 Bacterial dnaA protein helix-turn-helix CF59_RS23215 PF00308 Bacterial dnaA protein CF59_RS23220 PF00468 Ribosomal protein L34 CF59_RS23225 PF00825 Ribonuclease P CF59_RS23230 PF01809 Putative membrane protein insertion efficiency factor CF59_RS23235 PF14849 YidC periplasmic domain CF59_RS23235 PF02096 60Kd inner membrane protein CF59_RS23240 PF12631 MnmE helical domain CF59_RS23240 PF01926 50S ribosome-binding GTPase CF59_RS23240 PF10396 GTP-binding protein TrmE N-terminus CF59_RS23250 PF08053 Tryptophanase operon leader peptide CF59_RS23255 PF01212 Beta-eliminating lyase CF59_RS23260 PF03222 Tryptophan/tyrosine permease family CF59_RS23265 PF07690 Major Facilitator Superfamily CF59_RS23270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS23270 PF03466 LysR substrate binding domain CF59_RS23280 PF03358 NADPH-dependent FMN reductase CF59_RS23285 PF00860 Permease family CF59_RS23290 PF13419 Haloacid dehalogenase-like hydrolase CF59_RS23325 PF01895 PhoU domain CF59_RS23330 PF00005 ABC transporter CF59_RS23335 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS23340 PF00528 Binding-protein-dependent transport system inner membrane component CF59_RS23345 PF12849 PBP superfamily domain CF59_RS23355 PF00577 Outer membrane usher protein CF59_RS23355 PF13954 PapC N-terminal domain CF59_RS23355 PF13953 PapC C-terminal domain CF59_RS23360 PF02753 Pili assembly chaperone PapD, C-terminal domain CF59_RS23360 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF59_RS23365 PF00419 Fimbrial protein CF59_RS23370 PF01380 SIS domain CF59_RS23375 PF00132 Bacterial transferase hexapeptide (six repeats) CF59_RS23375 PF12804 MobA-like NTP transferase domain CF59_RS23375 PF14602 Hexapeptide repeat of succinyl-transferase CF59_RS23380 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CF59_RS23380 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CF59_RS23385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CF59_RS23385 PF02874 ATP synthase alpha/beta family, beta-barrel domain CF59_RS23390 PF00231 ATP synthase CF59_RS23395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CF59_RS23395 PF00306 ATP synthase alpha/beta chain, C terminal domain CF59_RS23395 PF02874 ATP synthase alpha/beta family, beta-barrel domain CF59_RS23400 PF00213 ATP synthase delta (OSCP) subunit CF59_RS23405 PF00430 ATP synthase B/B' CF(0) CF59_RS23410 PF00137 ATP synthase subunit C CF59_RS23415 PF00119 ATP synthase A chain CF59_RS23420 PF03899 ATP synthase I chain CF59_RS23425 PF02527 rRNA small subunit methyltransferase G CF59_RS23430 PF13932 GidA associated domain CF59_RS23430 PF01134 Glucose inhibited division protein A CF59_RS23435 PF00258 Flavodoxin CF59_RS23440 PF01037 Lrp/AsnC ligand binding domain CF59_RS23445 PF03590 Aspartate-ammonia ligase CF59_RS23450 PF05762 VWA domain containing CoxE-like protein CF59_RS23455 PF07728 AAA domain (dynein-related subfamily) CF59_RS23455 PF12592 Protein of unknown function (DUF3763) CF59_RS23455 PF17868 AAA lid domain CF59_RS23460 PF02705 K+ potassium transporter CF59_RS23465 PF05025 RbsD / FucU transport protein family CF59_RS23470 PF00005 ABC transporter CF59_RS23475 PF02653 Branched-chain amino acid transport system / permease component CF59_RS23480 PF13407 Periplasmic binding protein domain CF59_RS23485 PF00294 pfkB family carbohydrate kinase CF59_RS23490 PF00356 Bacterial regulatory proteins, lacI family CF59_RS23495 PF07690 Major Facilitator Superfamily CF59_RS23500 PF07729 FCD domain CF59_RS23500 PF00392 Bacterial regulatory proteins, gntR family CF59_RS23535 PF03466 LysR substrate binding domain CF59_RS23535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS23540 PF04219 Protein of unknown function, DUF CF59_RS23545 PF01078 Magnesium chelatase, subunit ChlI CF59_RS23545 PF13335 Magnesium chelatase, subunit ChlI C-terminal CF59_RS23550 PF08046 IlvGEDA operon leader peptide CF59_RS23555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CF59_RS23555 PF00205 Thiamine pyrophosphate enzyme, central domain CF59_RS23555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CF59_RS23565 PF01063 Amino-transferase class IV CF59_RS23570 PF00920 Dehydratase family CF59_RS23575 PF00291 Pyridoxal-phosphate dependent enzyme CF59_RS23575 PF00585 C-terminal regulatory domain of Threonine dehydratase CF59_RS23580 PF03466 LysR substrate binding domain CF59_RS23580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS23585 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CF59_RS23585 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CF59_RS23595 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CF59_RS23600 PF00580 UvrD/REP helicase N-terminal domain CF59_RS23600 PF13361 UvrD-like helicase C-terminal domain CF59_RS23605 PF02541 Ppx/GppA phosphatase family CF59_RS23610 PF00271 Helicase conserved C-terminal domain CF59_RS23610 PF00270 DEAD/DEAH box helicase CF59_RS23615 PF00085 Thioredoxin CF59_RS23625 PF07497 Rho termination factor, RNA-binding domain CF59_RS23625 PF07498 Rho termination factor, N-terminal domain CF59_RS23625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CF59_RS23630 PF01797 Transposase IS200 like CF59_RS23640 PF00953 Glycosyl transferase family 4 CF59_RS23645 PF02706 Chain length determinant protein CF59_RS23650 PF02350 UDP-N-acetylglucosamine 2-epimerase CF59_RS23655 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CF59_RS23655 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CF59_RS23655 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CF59_RS23665 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CF59_RS23670 PF01943 Polysaccharide biosynthesis protein CF59_RS23675 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 CF59_RS23680 PF06899 WzyE protein, O-antigen assembly polymerase CF59_RS23685 PF03808 Glycosyl transferase WecB/TagA/CpsF family CF59_RS23690 PF00324 Amino acid permease CF59_RS23715 PF04055 Radical SAM superfamily CF59_RS23715 PF13186 Iron-sulfur cluster-binding domain CF59_RS23720 PF00884 Sulfatase CF59_RS23725 PF07719 Tetratricopeptide repeat CF59_RS23725 PF07219 HemY protein N-terminus CF59_RS23730 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CF59_RS23735 PF02602 Uroporphyrinogen-III synthase HemD CF59_RS23740 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CF59_RS23740 PF03900 Porphobilinogen deaminase, C-terminal domain CF59_RS23745 PF01295 Adenylate cyclase, class-I CF59_RS23745 PF12633 Adenylate cyclase NT domain CF59_RS23750 PF01491 Frataxin-like domain CF59_RS23755 PF13627 Prokaryotic lipoprotein-attachment site CF59_RS23760 PF01678 Diaminopimelate epimerase CF59_RS23765 PF04340 Protein of unknown function, DUF484 CF59_RS23770 PF00589 Phage integrase family CF59_RS23770 PF02899 Phage integrase, N-terminal SAM-like domain CF59_RS23775 PF13419 Haloacid dehalogenase-like hydrolase CF59_RS23780 PF00580 UvrD/REP helicase N-terminal domain CF59_RS23780 PF13361 UvrD-like helicase C-terminal domain CF59_RS23785 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase CF59_RS23790 PF09992 Phosphodiester glycosidase CF59_RS23800 PF01544 CorA-like Mg2+ transporter protein CF59_RS23815 PF00892 EamA-like transporter family CF59_RS23820 PF03061 Thioesterase superfamily CF59_RS23825 PF02253 Phospholipase A1 CF59_RS23830 PF16124 RecQ zinc-binding CF59_RS23830 PF09382 RQC domain CF59_RS23830 PF00270 DEAD/DEAH box helicase CF59_RS23830 PF00570 HRDC domain CF59_RS23830 PF00271 Helicase conserved C-terminal domain CF59_RS23835 PF01810 LysE type translocator CF59_RS23840 PF01810 LysE type translocator CF59_RS23845 PF12146 Serine aminopeptidase, S33 CF59_RS23855 PF00892 EamA-like transporter family CF59_RS23860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF59_RS23860 PF03466 LysR substrate binding domain CF59_RS23865 PF01717 Cobalamin-independent synthase, Catalytic domain CF59_RS23865 PF08267 Cobalamin-independent synthase, N-terminal domain CF59_RS23880 PF05638 Type VI secretion system effector, Hcp CF59_RS23885 PF01738 Dienelactone hydrolase family CF59_RS23890 PF01048 Phosphorylase superfamily CF59_RS23895 PF02646 RmuC family CF59_RS23900 PF01209 ubiE/COQ5 methyltransferase family CF59_RS23905 PF02036 SCP-2 sterol transfer family CF59_RS23910 PF03109 ABC1 family CF59_RS23915 PF02416 mttA/Hcf106 family CF59_RS23925 PF00902 Sec-independent protein translocase protein (TatC) CF59_RS23930 PF01026 TatD related DNase CF59_RS23935 PF02357 Transcription termination factor nusG CF59_RS23940 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CF59_RS23945 PF00175 Oxidoreductase NAD-binding domain CF59_RS23945 PF00970 Oxidoreductase FAD-binding domain CF59_RS23950 PF00108 Thiolase, N-terminal domain CF59_RS23950 PF02803 Thiolase, C-terminal domain CF59_RS23955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CF59_RS23955 PF00378 Enoyl-CoA hydratase/isomerase CF59_RS23955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CF59_RS23960 PF00557 Metallopeptidase family M24 CF59_RS23965 PF01205 Uncharacterized protein family UPF0029 CF59_RS23965 PF09186 Domain of unknown function (DUF1949) CF59_RS23970 PF02386 Cation transport protein CF59_RS23975 PF12724 Flavodoxin domain CF59_RS24015 PF01464 Transglycosylase SLT domain CF59_RS24060 PF04917 Bacterial shufflon protein, N-terminal constant region CF59_RS24070 PF04917 Bacterial shufflon protein, N-terminal constant region CF59_RS24075 PF00589 Phage integrase family CF59_RS24100 PF00437 Type II/IV secretion system protein CF59_RS24115 PF01464 Transglycosylase SLT domain CF59_RS24125 PF04917 Bacterial shufflon protein, N-terminal constant region CF59_RS24130 PF07484 Phage Tail Collar Domain CF59_RS24130 PF08400 Prophage tail fibre N-terminal CF59_RS24130 PF03335 Phage tail fibre repeat CF59_RS24155 PF04204 Homoserine O-succinyltransferase CF59_RS24160 PF13673 Acetyltransferase (GNAT) domain CF59_RS24185 PF01177 Asp/Glu/Hydantoin racemase CF59_RS24200 PF06288 Protein of unknown function (DUF1040) CF59_RS24205 PF12804 MobA-like NTP transferase domain CF59_RS24215 PF13276 HTH-like domain CF59_RS24215 PF00665 Integrase core domain CF59_RS24215 PF13333 Integrase core domain CF59_RS24290 PF05593 RHS Repeat CF59_RS24290 PF03527 RHS protein CF59_RS24295 PF13808 DDE_Tnp_1-associated CF59_RS24295 PF01609 Transposase DDE domain CF59_RS24340 PF07151 Protein of unknown function (DUF1391) CF59_RS24385 PF10662 Ethanolamine utilisation - propanediol utilisation CF59_RS24390 PF01757 Acyltransferase family CF59_RS24405 PF04917 Bacterial shufflon protein, N-terminal constant region