locus-tag class description CF57_RS00005 PF11638 DnaA N-terminal domain CF57_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CF57_RS00005 PF00308 Bacterial dnaA protein CF57_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CF57_RS00010 PF02767 DNA polymerase III beta subunit, central domain CF57_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CF57_RS00015 PF02463 RecF/RecN/SMC N terminal domain CF57_RS00020 PF01751 Toprim domain CF57_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS00020 PF18053 DNA gyrase B subunit insert domain CF57_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus CF57_RS00020 PF00204 DNA gyrase B CF57_RS00030 PF06078 Bacterial protein of unknown function (DUF937) CF57_RS00045 PF00392 Bacterial regulatory proteins, gntR family CF57_RS00045 PF07729 FCD domain CF57_RS00050 PF05035 2-keto-3-deoxy-galactonokinase CF57_RS00055 PF01081 KDPG and KHG aldolase CF57_RS00060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CF57_RS00060 PF13378 Enolase C-terminal domain-like CF57_RS00065 PF07690 Major Facilitator Superfamily CF57_RS00070 PF01494 FAD binding domain CF57_RS00075 PF12566 Protein of unknown function (DUF3748) CF57_RS00075 PF07676 WD40-like Beta Propeller Repeat CF57_RS00080 PF07119 Protein of unknown function (DUF1375) CF57_RS00085 PF00011 Hsp20/alpha crystallin family CF57_RS00090 PF00011 Hsp20/alpha crystallin family CF57_RS00095 PF02080 TrkA-C domain CF57_RS00095 PF06826 Predicted Permease Membrane Region CF57_RS00100 PF00392 Bacterial regulatory proteins, gntR family CF57_RS00100 PF07702 UTRA domain CF57_RS00105 PF02378 Phosphotransferase system, EIIC CF57_RS00105 PF00367 phosphotransferase system, EIIB CF57_RS00110 PF11975 Family 4 glycosyl hydrolase C-terminal domain CF57_RS00110 PF02056 Family 4 glycosyl hydrolase CF57_RS00120 PF12323 Helix-turn-helix domain CF57_RS00120 PF01385 Probable transposase CF57_RS00120 PF07282 Putative transposase DNA-binding domain CF57_RS00125 PF02656 Domain of unknown function (DUF202) CF57_RS00130 PF02656 Domain of unknown function (DUF202) CF57_RS00140 PF07690 Major Facilitator Superfamily CF57_RS00145 PF13939 Toxin TisB, type I toxin-antitoxin system CF57_RS00160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CF57_RS00160 PF00205 Thiamine pyrophosphate enzyme, central domain CF57_RS00160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CF57_RS00165 PF01842 ACT domain CF57_RS00170 PF00072 Response regulator receiver domain CF57_RS00170 PF00196 Bacterial regulatory proteins, luxR family CF57_RS00175 PF07730 Histidine kinase CF57_RS00175 PF05231 MASE1 CF57_RS00175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS00180 PF07690 Major Facilitator Superfamily CF57_RS00185 PF07690 Major Facilitator Superfamily CF57_RS00190 PF01979 Amidohydrolase family CF57_RS00190 PF13382 Adenine deaminase C-terminal domain CF57_RS00195 PF00860 Permease family CF57_RS00200 PF06711 Protein of unknown function (DUF1198) CF57_RS00205 PF07690 Major Facilitator Superfamily CF57_RS00220 PF03180 NLPA lipoprotein CF57_RS00225 PF00892 EamA-like transporter family CF57_RS00230 PF07690 Major Facilitator Superfamily CF57_RS00250 PF13802 Galactose mutarotase-like CF57_RS00250 PF01055 Glycosyl hydrolases family 31 CF57_RS00255 PF05170 AsmA family CF57_RS00260 PF00860 Permease family CF57_RS00265 PF03616 Sodium/glutamate symporter CF57_RS00270 PF00271 Helicase conserved C-terminal domain CF57_RS00270 PF17191 RecG wedge domain CF57_RS00270 PF00270 DEAD/DEAH box helicase CF57_RS00275 PF12105 SpoU, rRNA methylase, C-terminal CF57_RS00275 PF00588 SpoU rRNA Methylase family CF57_RS00280 PF04607 Region found in RelA / SpoT proteins CF57_RS00280 PF13291 ACT domain CF57_RS00280 PF02824 TGS domain CF57_RS00285 PF01192 RNA polymerase Rpb6 CF57_RS00290 PF00625 Guanylate kinase CF57_RS00295 PF01653 NAD-dependent DNA ligase adenylation domain CF57_RS00295 PF03120 NAD-dependent DNA ligase OB-fold domain CF57_RS00300 PF03458 UPF0126 domain CF57_RS00310 PF08340 Domain of unknown function (DUF1732) CF57_RS00310 PF03755 YicC-like family, N-terminal region CF57_RS00315 PF03725 3' exoribonuclease family, domain 2 CF57_RS00315 PF01138 3' exoribonuclease family, domain 1 CF57_RS00320 PF00156 Phosphoribosyl transferase domain CF57_RS00325 PF00440 Bacterial regulatory proteins, tetR family CF57_RS00330 PF00692 dUTPase CF57_RS00335 PF04127 DNA / pantothenate metabolism flavoprotein CF57_RS00335 PF02441 Flavoprotein CF57_RS00340 PF04002 RadC-like JAB domain CF57_RS00345 PF00830 Ribosomal L28 family CF57_RS00350 PF00471 Ribosomal protein L33 CF57_RS00355 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CF57_RS00355 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CF57_RS00355 PF06827 Zinc finger found in FPG and IleRS CF57_RS00360 PF01467 Cytidylyltransferase-like CF57_RS00365 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CF57_RS00370 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CF57_RS00375 PF00534 Glycosyl transferases group 1 CF57_RS00375 PF13439 Glycosyltransferase Family 4 CF57_RS00385 PF01501 Glycosyl transferase family 8 CF57_RS00385 PF08437 Glycosyl transferase family 8 C-terminal CF57_RS00390 PF08437 Glycosyl transferase family 8 C-terminal CF57_RS00390 PF01501 Glycosyl transferase family 8 CF57_RS00395 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) CF57_RS00400 PF01501 Glycosyl transferase family 8 CF57_RS00400 PF08437 Glycosyl transferase family 8 C-terminal CF57_RS00405 PF00535 Glycosyl transferase family 2 CF57_RS00410 PF04932 O-Antigen ligase CF57_RS00415 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CF57_RS00420 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CF57_RS00425 PF01370 NAD dependent epimerase/dehydratase family CF57_RS00430 PF00155 Aminotransferase class I and II CF57_RS00435 PF00107 Zinc-binding dehydrogenase CF57_RS00435 PF08240 Alcohol dehydrogenase GroES-like domain CF57_RS00440 PF00535 Glycosyl transferase family 2 CF57_RS00445 PF04748 Divergent polysaccharide deacetylase CF57_RS00450 PF01551 Peptidase family M23 CF57_RS00455 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CF57_RS00455 PF01676 Metalloenzyme superfamily CF57_RS00460 PF00581 Rhodanese-like domain CF57_RS00465 PF00462 Glutaredoxin CF57_RS00470 PF02556 Preprotein translocase subunit SecB CF57_RS00475 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CF57_RS00475 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CF57_RS00480 PF06426 Serine acetyltransferase, N-terminal CF57_RS00480 PF00132 Bacterial transferase hexapeptide (six repeats) CF57_RS00485 PF00588 SpoU rRNA Methylase family CF57_RS00490 PF01070 FMN-dependent dehydrogenase CF57_RS00495 PF00392 Bacterial regulatory proteins, gntR family CF57_RS00495 PF07729 FCD domain CF57_RS00500 PF02652 L-lactate permease CF57_RS00505 PF05662 Coiled stalk of trimeric autotransporter adhesin CF57_RS00505 PF03895 YadA-like membrane anchor domain CF57_RS00505 PF13018 Extended Signal Peptide of Type V secretion system CF57_RS00505 PF05658 Head domain of trimeric autotransporter adhesin CF57_RS00510 PF11622 Protein of unknown function (DUF3251) CF57_RS00515 PF10928 Protein of unknown function (DUF2810) CF57_RS00525 PF05068 Mannitol repressor CF57_RS00530 PF01232 Mannitol dehydrogenase Rossmann domain CF57_RS00530 PF08125 Mannitol dehydrogenase C-terminal domain CF57_RS00535 PF02378 Phosphotransferase system, EIIC CF57_RS00535 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF57_RS00535 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF57_RS00540 PF11742 Protein of unknown function (DUF3302) CF57_RS00545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF57_RS00545 PF00529 HlyD membrane-fusion protein of T1SS CF57_RS00550 PF15596 Immunity protein 57 CF57_RS00560 PF03527 RHS protein CF57_RS00565 PF03130 PBS lyase HEAT-like repeat CF57_RS00570 PF05593 RHS Repeat CF57_RS00570 PF03527 RHS protein CF57_RS00570 PF15606 Bacterial toxin 34 CF57_RS00575 PF00043 Glutathione S-transferase, C-terminal domain CF57_RS00575 PF13417 Glutathione S-transferase, N-terminal domain CF57_RS00580 PF03841 L-seryl-tRNA selenium transferase CF57_RS00580 PF12390 Selenocysteine synthase N terminal CF57_RS00585 PF09106 Elongation factor SelB, winged helix CF57_RS00585 PF09107 Elongation factor SelB, winged helix CF57_RS00585 PF03144 Elongation factor Tu domain 2 CF57_RS00585 PF00009 Elongation factor Tu GTP binding domain CF57_RS00590 PF00465 Iron-containing alcohol dehydrogenase CF57_RS00595 PF00171 Aldehyde dehydrogenase family CF57_RS00605 PF11742 Protein of unknown function (DUF3302) CF57_RS00610 PF00529 HlyD membrane-fusion protein of T1SS CF57_RS00610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF57_RS00615 PF03466 LysR substrate binding domain CF57_RS00615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS00620 PF06629 MltA-interacting protein MipA CF57_RS00625 PF07944 Beta-L-arabinofuranosidase, GH127 CF57_RS00640 PF00596 Class II Aldolase and Adducin N-terminal domain CF57_RS00645 PF01261 Xylose isomerase-like TIM barrel CF57_RS00650 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CF57_RS00655 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CF57_RS00655 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CF57_RS00660 PF03480 Bacterial extracellular solute-binding protein, family 7 CF57_RS00665 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CF57_RS00670 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CF57_RS00675 PF04074 YhcH/YjgK/YiaL CF57_RS00680 PF02615 Malate/L-lactate dehydrogenase CF57_RS00685 PF09339 IclR helix-turn-helix domain CF57_RS00685 PF01614 Bacterial transcriptional regulator CF57_RS00690 PF13247 4Fe-4S dicluster domain CF57_RS00700 PF00155 Aminotransferase class I and II CF57_RS00705 PF00128 Alpha amylase, catalytic domain CF57_RS00710 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CF57_RS00715 PF12833 Helix-turn-helix domain CF57_RS00720 PF02653 Branched-chain amino acid transport system / permease component CF57_RS00725 PF00005 ABC transporter CF57_RS00730 PF13407 Periplasmic binding protein domain CF57_RS00740 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CF57_RS00740 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CF57_RS00745 PF05360 yiaA/B two helix domain CF57_RS00750 PF05360 yiaA/B two helix domain CF57_RS00755 PF01757 Acyltransferase family CF57_RS00760 PF13983 YsaB-like lipoprotein CF57_RS00765 PF02091 Glycyl-tRNA synthetase alpha subunit CF57_RS00770 PF05746 DALR anticodon binding domain CF57_RS00770 PF02092 Glycyl-tRNA synthetase beta subunit CF57_RS00780 PF13333 Integrase core domain CF57_RS00780 PF00665 Integrase core domain CF57_RS00780 PF13276 HTH-like domain CF57_RS00785 PF01848 Hok/gef family CF57_RS00790 PF00313 'Cold-shock' DNA-binding domain CF57_RS00795 PF01381 Helix-turn-helix CF57_RS00800 PF11254 Protein of unknown function (DUF3053) CF57_RS00805 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CF57_RS00805 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CF57_RS00810 PF00691 OmpA family CF57_RS00810 PF13488 Glycine zipper CF57_RS00815 PF18364 Molybdopterin oxidoreductase N-terminal domain CF57_RS00815 PF01568 Molydopterin dinucleotide binding domain CF57_RS00815 PF00384 Molybdopterin oxidoreductase CF57_RS00820 PF00583 Acetyltransferase (GNAT) family CF57_RS00825 PF03352 Methyladenine glycosylase CF57_RS00830 PF03797 Autotransporter beta-domain CF57_RS00835 PF07690 Major Facilitator Superfamily CF57_RS00840 PF00884 Sulfatase CF57_RS00840 PF08019 Phosphoethanolamine transferase EptA/EptB CF57_RS00855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF57_RS00865 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS00870 PF12911 N-terminal TM domain of oligopeptide transport permease C CF57_RS00870 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS00875 PF00005 ABC transporter CF57_RS00875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF57_RS00880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF57_RS00880 PF00005 ABC transporter CF57_RS00885 PF03222 Tryptophan/tyrosine permease family CF57_RS00900 PF11658 Cellulose biosynthesis protein BcsG CF57_RS00905 PF11120 Cellulose biosynthesis protein BcsF CF57_RS00910 PF10995 Cellulose biosynthesis GIL CF57_RS00925 PF10995 Cellulose biosynthesis GIL CF57_RS00930 PF10945 Cellulose biosynthesis protein BcsR CF57_RS00935 PF06564 Cellulose biosynthesis protein BcsQ CF57_RS00940 PF03552 Cellulose synthase CF57_RS00940 PF00535 Glycosyl transferase family 2 CF57_RS00940 PF07238 PilZ domain CF57_RS00945 PF03170 Bacterial cellulose synthase subunit CF57_RS00950 PF01270 Glycosyl hydrolases family 8 CF57_RS00955 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CF57_RS00960 PF00672 HAMP domain CF57_RS00960 PF17154 Gammaproteobacterial periplasmic sensor domain CF57_RS00960 PF00990 Diguanylate cyclase, GGDEF domain CF57_RS00960 PF00563 EAL domain CF57_RS00965 PF00375 Sodium:dicarboxylate symporter family CF57_RS00970 PF05193 Peptidase M16 inactive domain CF57_RS00970 PF00675 Insulinase (Peptidase family M16) CF57_RS00975 PF00294 pfkB family carbohydrate kinase CF57_RS00985 PF00563 EAL domain CF57_RS00990 PF05170 AsmA family CF57_RS00995 PF00083 Sugar (and other) transporter CF57_RS00995 PF07690 Major Facilitator Superfamily CF57_RS01000 PF03631 Virulence factor BrkB CF57_RS01005 PF03466 LysR substrate binding domain CF57_RS01005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS01010 PF00196 Bacterial regulatory proteins, luxR family CF57_RS01015 PF01204 Trehalase CF57_RS01020 PF00034 Cytochrome c CF57_RS01020 PF03150 Di-haem cytochrome c peroxidase CF57_RS01020 PF14376 Haem-binding domain CF57_RS01025 PF12759 InsA C-terminal domain CF57_RS01025 PF03811 InsA N-terminal domain CF57_RS01030 PF03400 IS1 transposase CF57_RS01035 PF14376 Haem-binding domain CF57_RS01035 PF00034 Cytochrome c CF57_RS01035 PF03150 Di-haem cytochrome c peroxidase CF57_RS01040 PF00282 Pyridoxal-dependent decarboxylase conserved domain CF57_RS01045 PF03400 IS1 transposase CF57_RS01050 PF12833 Helix-turn-helix domain CF57_RS01055 PF12833 Helix-turn-helix domain CF57_RS01060 PF00873 AcrB/AcrD/AcrF family CF57_RS01065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF57_RS01065 PF00529 HlyD membrane-fusion protein of T1SS CF57_RS01075 PF00196 Bacterial regulatory proteins, luxR family CF57_RS01080 PF03729 Short repeat of unknown function (DUF308) CF57_RS01085 PF06411 HdeA/HdeB family CF57_RS01090 PF06411 HdeA/HdeB family CF57_RS01095 PF02308 MgtC family CF57_RS01100 PF00196 Bacterial regulatory proteins, luxR family CF57_RS01105 PF03843 Outer membrane lipoprotein Slp family CF57_RS01115 PF03960 ArsC family CF57_RS01120 PF02040 Arsenical pump membrane protein CF57_RS01125 PF01022 Bacterial regulatory protein, arsR family CF57_RS01140 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF57_RS01140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CF57_RS01145 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CF57_RS01150 PF01432 Peptidase family M3 CF57_RS01155 PF04445 Putative SAM-dependent methyltransferase CF57_RS01160 PF00854 POT family CF57_RS01165 PF00582 Universal stress protein family CF57_RS01170 PF10625 Universal stress protein B (UspB) CF57_RS01175 PF01384 Phosphate transporter family CF57_RS01185 PF08722 TnsA endonuclease N terminal CF57_RS01185 PF08721 TnsA endonuclease C terminal CF57_RS01190 PF01527 Transposase CF57_RS01195 PF13333 Integrase core domain CF57_RS01195 PF13276 HTH-like domain CF57_RS01195 PF00665 Integrase core domain CF57_RS01210 PF11426 Tn7 transposition regulator TnsC CF57_RS01210 PF13401 AAA domain CF57_RS01225 PF10951 Protein of unknown function (DUF2776) CF57_RS01245 PF13258 Domain of unknown function (DUF4049) CF57_RS01250 PF13533 Biotin-lipoyl like CF57_RS01255 PF00005 ABC transporter CF57_RS01265 PF13808 DDE_Tnp_1-associated CF57_RS01265 PF01609 Transposase DDE domain CF57_RS01275 PF15631 NTF2 fold immunity protein CF57_RS01280 PF14220 Domain of unknown function (DUF4329) CF57_RS01280 PF05593 RHS Repeat CF57_RS01280 PF03527 RHS protein CF57_RS01285 PF08753 NikR C terminal nickel binding domain CF57_RS01285 PF01402 Ribbon-helix-helix protein, copG family CF57_RS01290 PF00005 ABC transporter CF57_RS01295 PF00005 ABC transporter CF57_RS01300 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS01305 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS01310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF57_RS01315 PF01648 4'-phosphopantetheinyl transferase superfamily CF57_RS01320 PF01594 AI-2E family transporter CF57_RS01325 PF07690 Major Facilitator Superfamily CF57_RS01330 PF08786 DcrB CF57_RS01335 PF02592 Putative vitamin uptake transporter CF57_RS01340 PF01206 Sulfurtransferase TusA CF57_RS01345 PF00403 Heavy-metal-associated domain CF57_RS01350 PF07947 YhhN family CF57_RS01355 PF10694 Protein of unknown function (DUF2500) CF57_RS01360 PF06611 Protein of unknown function (DUF1145) CF57_RS01370 PF02881 SRP54-type protein, helical bundle domain CF57_RS01370 PF00448 SRP54-type protein, GTPase domain CF57_RS01375 PF00005 ABC transporter CF57_RS01380 PF18075 FtsX extracellular domain CF57_RS01380 PF02687 FtsX-like permease family CF57_RS01385 PF04542 Sigma-70 region 2 CF57_RS01385 PF04545 Sigma-70, region 4 CF57_RS01390 PF13458 Periplasmic binding protein CF57_RS01400 PF12568 Acetyltransferase (GNAT) domain, PanZ CF57_RS01405 PF13458 Periplasmic binding protein CF57_RS01410 PF02653 Branched-chain amino acid transport system / permease component CF57_RS01415 PF11862 Domain of unknown function (DUF3382) CF57_RS01415 PF02653 Branched-chain amino acid transport system / permease component CF57_RS01420 PF00005 ABC transporter CF57_RS01420 PF12399 Branched-chain amino acid ATP-binding cassette transporter CF57_RS01425 PF00005 ABC transporter CF57_RS01435 PF13416 Bacterial extracellular solute-binding protein CF57_RS01440 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS01445 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS01450 PF17912 MalK OB fold domain CF57_RS01450 PF00005 ABC transporter CF57_RS01455 PF03009 Glycerophosphoryl diester phosphodiesterase family CF57_RS01460 PF10956 Protein of unknown function (DUF2756) CF57_RS01470 PF15567 Immunity protein 35 CF57_RS01480 PF05638 Type VI secretion system effector, Hcp CF57_RS01485 PF00583 Acetyltransferase (GNAT) family CF57_RS01490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CF57_RS01490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CF57_RS01495 PF02678 Pirin CF57_RS01495 PF17954 Quercetinase C-terminal cupin domain CF57_RS01500 PF00356 Bacterial regulatory proteins, lacI family CF57_RS01500 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CF57_RS01505 PF01202 Shikimate kinase CF57_RS01510 PF02447 GntP family permease CF57_RS01515 PF01914 MarC family integral membrane protein CF57_RS01520 PF02774 Semialdehyde dehydrogenase, dimerisation domain CF57_RS01520 PF01118 Semialdehyde dehydrogenase, NAD binding domain CF57_RS01525 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CF57_RS01525 PF02806 Alpha amylase, C-terminal all-beta domain CF57_RS01525 PF00128 Alpha amylase, catalytic domain CF57_RS01530 PF00128 Alpha amylase, catalytic domain CF57_RS01530 PF18390 Glycogen debranching enzyme C-terminal domain CF57_RS01530 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CF57_RS01535 PF00483 Nucleotidyl transferase CF57_RS01540 PF00534 Glycosyl transferases group 1 CF57_RS01540 PF08323 Starch synthase catalytic domain CF57_RS01545 PF00343 Carbohydrate phosphorylase CF57_RS01570 PF01266 FAD dependent oxidoreductase CF57_RS01570 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CF57_RS01575 PF00581 Rhodanese-like domain CF57_RS01580 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CF57_RS01580 PF01694 Rhomboid family CF57_RS01585 PF08220 DeoR-like helix-turn-helix domain CF57_RS01585 PF00455 DeoR C terminal sensor domain CF57_RS01590 PF00158 Sigma-54 interaction domain CF57_RS01590 PF06956 Regulator of RNA terminal phosphate cyclase CF57_RS01595 PF01139 tRNA-splicing ligase RtcB CF57_RS01605 PF17874 MalT-like TPR region CF57_RS01605 PF00196 Bacterial regulatory proteins, luxR family CF57_RS01610 PF00343 Carbohydrate phosphorylase CF57_RS01615 PF02446 4-alpha-glucanotransferase CF57_RS01620 PF02447 GntP family permease CF57_RS01625 PF01521 Iron-sulphur cluster biosynthesis CF57_RS01625 PF01106 NifU-like domain CF57_RS01630 PF00156 Phosphoribosyl transferase domain CF57_RS01635 PF00561 alpha/beta hydrolase fold CF57_RS01640 PF04754 Putative transposase, YhgA-like CF57_RS01645 PF09012 FeoC like transcriptional regulator CF57_RS01650 PF02421 Ferrous iron transport protein B CF57_RS01650 PF17910 FeoB cytosolic helical domain CF57_RS01650 PF07664 Ferrous iron transport protein B C terminus CF57_RS01650 PF07670 Nucleoside recognition CF57_RS01655 PF04023 FeoA domain CF57_RS01660 PF16921 Tex protein YqgF-like domain CF57_RS01660 PF00575 S1 RNA binding domain CF57_RS01660 PF17674 HHH domain CF57_RS01660 PF09371 Tex-like protein N-terminal domain CF57_RS01665 PF03449 Transcription elongation factor, N-terminal CF57_RS01665 PF01272 Transcription elongation factor, GreA/GreB, C-term CF57_RS01670 PF00072 Response regulator receiver domain CF57_RS01670 PF00486 Transcriptional regulatory protein, C terminal CF57_RS01675 PF00672 HAMP domain CF57_RS01675 PF00512 His Kinase A (phospho-acceptor) domain CF57_RS01675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS01680 PF01293 Phosphoenolpyruvate carboxykinase CF57_RS01690 PF13687 Domain of unknown function (DUF4153) CF57_RS01695 PF01430 Hsp33 protein CF57_RS01700 PF01479 S4 domain CF57_RS01705 PF13419 Haloacid dehalogenase-like hydrolase CF57_RS01710 PF07095 Intracellular growth attenuator protein IgaA CF57_RS01715 PF00293 NUDIX domain CF57_RS01720 PF00912 Transglycosylase CF57_RS01720 PF17092 Penicillin-binding protein OB-like domain CF57_RS01720 PF00905 Penicillin binding protein transpeptidase domain CF57_RS01730 PF05137 Fimbrial assembly protein (PilN) CF57_RS01740 PF10748 DNA utilization proteins HofP CF57_RS01745 PF03958 Bacterial type II/III secretion system short domain CF57_RS01745 PF00263 Bacterial type II and III secretion system protein CF57_RS01750 PF01202 Shikimate kinase CF57_RS01755 PF01761 3-dehydroquinate synthase CF57_RS01760 PF05036 Sporulation related domain CF57_RS01765 PF02086 D12 class N6 adenine-specific DNA methyltransferase CF57_RS01770 PF00834 Ribulose-phosphate 3 epimerase family CF57_RS01775 PF13419 Haloacid dehalogenase-like hydrolase CF57_RS01780 PF00579 tRNA synthetases class I (W and Y) CF57_RS01785 PF14503 YhfZ C-terminal domain CF57_RS01785 PF14502 Helix-turn-helix domain CF57_RS01795 PF01168 Alanine racemase, N-terminal domain CF57_RS01800 PF01676 Metalloenzyme superfamily CF57_RS01805 PF02126 Phosphotriesterase family CF57_RS01810 PF10941 Protein of unknown function DUF2620 CF57_RS01815 PF10797 Protein of unknown function CF57_RS01820 PF00155 Aminotransferase class I and II CF57_RS01825 PF07702 UTRA domain CF57_RS01825 PF00392 Bacterial regulatory proteins, gntR family CF57_RS01830 PF00294 pfkB family carbohydrate kinase CF57_RS01835 PF01261 Xylose isomerase-like TIM barrel CF57_RS01840 PF01380 SIS domain CF57_RS01845 PF13520 Amino acid permease CF57_RS01850 PF13978 Protein of unknown function (DUF4223) CF57_RS01855 PF10414 Sirohaem synthase dimerisation region CF57_RS01855 PF14824 Sirohaem biosynthesis protein central CF57_RS01855 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CF57_RS01860 PF01226 Formate/nitrite transporter CF57_RS01865 PF13806 Rieske-like [2Fe-2S] domain CF57_RS01870 PF04324 BFD-like [2Fe-2S] binding domain CF57_RS01870 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CF57_RS01870 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CF57_RS01870 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF57_RS01870 PF18267 Rubredoxin NAD+ reductase C-terminal domain CF57_RS01875 PF07690 Major Facilitator Superfamily CF57_RS01880 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CF57_RS01885 PF10832 Protein of unknown function (DUF2559) CF57_RS01890 PF02661 Fic/DOC family CF57_RS01895 PF00117 Glutamine amidotransferase class-I CF57_RS01900 PF00202 Aminotransferase class-III CF57_RS01905 PF12805 FUSC-like inner membrane protein yccS CF57_RS01910 PF13545 Crp-like helix-turn-helix domain CF57_RS01910 PF00027 Cyclic nucleotide-binding domain CF57_RS01920 PF02566 OsmC-like protein CF57_RS01925 PF00485 Phosphoribulokinase / Uridine kinase family CF57_RS01930 PF06794 Uncharacterised protein family (UPF0270) CF57_RS01935 PF00561 alpha/beta hydrolase fold CF57_RS01940 PF00005 ABC transporter CF57_RS01940 PF12848 ABC transporter CF57_RS01945 PF02525 Flavodoxin-like fold CF57_RS01950 PF02254 TrkA-N domain CF57_RS01950 PF00999 Sodium/hydrogen exchanger family CF57_RS01955 PF09526 Probable metal-binding protein (DUF2387) CF57_RS01960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CF57_RS01965 PF04102 SlyX CF57_RS01970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CF57_RS01970 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CF57_RS01975 PF08348 YheO-like PAS domain CF57_RS01975 PF13309 HTH domain CF57_RS01980 PF02635 DsrE/DsrF-like family CF57_RS01985 PF02635 DsrE/DsrF-like family CF57_RS01990 PF04077 DsrH like protein CF57_RS01995 PF00164 Ribosomal protein S12/S23 CF57_RS02000 PF00177 Ribosomal protein S7p/S5e CF57_RS02005 PF03144 Elongation factor Tu domain 2 CF57_RS02005 PF03764 Elongation factor G, domain IV CF57_RS02005 PF00679 Elongation factor G C-terminus CF57_RS02005 PF14492 Elongation Factor G, domain II CF57_RS02005 PF00009 Elongation factor Tu GTP binding domain CF57_RS02010 PF03143 Elongation factor Tu C-terminal domain CF57_RS02010 PF03144 Elongation factor Tu domain 2 CF57_RS02010 PF00009 Elongation factor Tu GTP binding domain CF57_RS02015 PF02839 Carbohydrate binding domain CF57_RS02020 PF04324 BFD-like [2Fe-2S] binding domain CF57_RS02025 PF00210 Ferritin-like domain CF57_RS02030 PF01478 Type IV leader peptidase family CF57_RS02035 PF03400 IS1 transposase CF57_RS02040 PF01478 Type IV leader peptidase family CF57_RS02045 PF04612 Type II secretion system (T2SS), protein M CF57_RS02050 PF05134 Type II secretion system (T2SS), protein L CF57_RS02050 PF12693 GspL periplasmic domain CF57_RS02055 PF03934 Type II secretion system (T2SS), protein K CF57_RS02060 PF07963 Prokaryotic N-terminal methylation motif CF57_RS02060 PF11612 Type II secretion system (T2SS), protein J CF57_RS02065 PF02501 Type II secretion system (T2SS), protein I CF57_RS02065 PF07963 Prokaryotic N-terminal methylation motif CF57_RS02070 PF12019 Type II transport protein GspH CF57_RS02070 PF07963 Prokaryotic N-terminal methylation motif CF57_RS02075 PF07963 Prokaryotic N-terminal methylation motif CF57_RS02075 PF08334 Type II secretion system (T2SS), protein G CF57_RS02080 PF00482 Type II secretion system (T2SS), protein F CF57_RS02090 PF00263 Bacterial type II and III secretion system protein CF57_RS02090 PF03958 Bacterial type II/III secretion system short domain CF57_RS02095 PF11356 Type II secretion system protein C CF57_RS02100 PF13401 AAA domain CF57_RS02100 PF01471 Putative peptidoglycan binding domain CF57_RS02110 PF00338 Ribosomal protein S10p/S20e CF57_RS02115 PF00297 Ribosomal protein L3 CF57_RS02120 PF00573 Ribosomal protein L4/L1 family CF57_RS02125 PF00276 Ribosomal protein L23 CF57_RS02130 PF00181 Ribosomal Proteins L2, RNA binding domain CF57_RS02130 PF03947 Ribosomal Proteins L2, C-terminal domain CF57_RS02135 PF00203 Ribosomal protein S19 CF57_RS02140 PF00237 Ribosomal protein L22p/L17e CF57_RS02145 PF00189 Ribosomal protein S3, C-terminal domain CF57_RS02145 PF07650 KH domain CF57_RS02150 PF00252 Ribosomal protein L16p/L10e CF57_RS02155 PF00831 Ribosomal L29 protein CF57_RS02160 PF00366 Ribosomal protein S17 CF57_RS02165 PF00238 Ribosomal protein L14p/L23e CF57_RS02170 PF00467 KOW motif CF57_RS02170 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CF57_RS02175 PF00673 ribosomal L5P family C-terminus CF57_RS02175 PF00281 Ribosomal protein L5 CF57_RS02180 PF00253 Ribosomal protein S14p/S29e CF57_RS02185 PF00410 Ribosomal protein S8 CF57_RS02190 PF00347 Ribosomal protein L6 CF57_RS02195 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CF57_RS02200 PF03719 Ribosomal protein S5, C-terminal domain CF57_RS02200 PF00333 Ribosomal protein S5, N-terminal domain CF57_RS02205 PF00327 Ribosomal protein L30p/L7e CF57_RS02210 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CF57_RS02215 PF00344 SecY translocase CF57_RS02220 PF00444 Ribosomal protein L36 CF57_RS02225 PF00416 Ribosomal protein S13/S18 CF57_RS02230 PF00411 Ribosomal protein S11 CF57_RS02235 PF00163 Ribosomal protein S4/S9 N-terminal domain CF57_RS02235 PF01479 S4 domain CF57_RS02240 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CF57_RS02240 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CF57_RS02240 PF01000 RNA polymerase Rpb3/RpoA insert domain CF57_RS02245 PF01196 Ribosomal protein L17 CF57_RS02250 PF09350 Domain of unknown function (DUF1992) CF57_RS02255 PF13411 MerR HTH family regulatory protein CF57_RS02260 PF03889 Alternative ribosome-rescue factor A CF57_RS02265 PF01741 Large-conductance mechanosensitive channel, MscL CF57_RS02270 PF02254 TrkA-N domain CF57_RS02270 PF02080 TrkA-C domain CF57_RS02275 PF01029 NusB family CF57_RS02275 PF01189 16S rRNA methyltransferase RsmB/F CF57_RS02280 PF00551 Formyl transferase CF57_RS02280 PF02911 Formyl transferase, C-terminal domain CF57_RS02285 PF01327 Polypeptide deformylase CF57_RS02290 PF02481 DNA recombination-mediator protein A CF57_RS02290 PF17782 DprA winged helix domain CF57_RS02295 PF04361 Protein of unknown function (DUF494) CF57_RS02300 PF01396 Topoisomerase DNA binding C4 zinc finger CF57_RS02305 PF01300 Telomere recombination CF57_RS02310 PF08501 Shikimate dehydrogenase substrate binding domain CF57_RS02310 PF01488 Shikimate / quinate 5-dehydrogenase CF57_RS02310 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CF57_RS02315 PF07369 Protein of unknown function (DUF1488) CF57_RS02320 PF00132 Bacterial transferase hexapeptide (six repeats) CF57_RS02360 PF00005 ABC transporter CF57_RS02365 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS02370 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS02375 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF57_RS02390 PF00873 AcrB/AcrD/AcrF family CF57_RS02395 PF00529 HlyD membrane-fusion protein of T1SS CF57_RS02395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF57_RS02400 PF00440 Bacterial regulatory proteins, tetR family CF57_RS02400 PF08361 MAATS-type transcriptional repressor, C-terminal region CF57_RS02405 PF10831 Protein of unknown function (DUF2556) CF57_RS02410 PF01555 DNA methylase CF57_RS02415 PF02954 Bacterial regulatory protein, Fis family CF57_RS02420 PF01207 Dihydrouridine synthase (Dus) CF57_RS02430 PF00474 Sodium:solute symporter family CF57_RS02435 PF06196 Protein of unknown function (DUF997) CF57_RS02440 PF02785 Biotin carboxylase C-terminal domain CF57_RS02440 PF00289 Biotin carboxylase, N-terminal domain CF57_RS02440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CF57_RS02445 PF00364 Biotin-requiring enzyme CF57_RS02450 PF01794 Ferric reductase like transmembrane component CF57_RS02465 PF00107 Zinc-binding dehydrogenase CF57_RS02465 PF08240 Alcohol dehydrogenase GroES-like domain CF57_RS02470 PF17157 Gammaproteobacterial periplasmic sensor domain CF57_RS02470 PF00563 EAL domain CF57_RS02470 PF00990 Diguanylate cyclase, GGDEF domain CF57_RS02485 PF04085 rod shape-determining protein MreC CF57_RS02490 PF04093 rod shape-determining protein MreD CF57_RS02495 PF02545 Maf-like protein CF57_RS02500 PF00575 S1 RNA binding domain CF57_RS02500 PF10150 Ribonuclease E/G family CF57_RS02505 PF13116 Protein of unknown function CF57_RS02505 PF13502 AsmA-like C-terminal region CF57_RS02510 PF01523 Putative modulator of DNA gyrase CF57_RS02515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS02515 PF03466 LysR substrate binding domain CF57_RS02520 PF07869 Protein of unknown function (DUF1656) CF57_RS02525 PF13533 Biotin-lipoyl like CF57_RS02530 PF04632 Fusaric acid resistance protein family CF57_RS02535 PF01337 Barstar (barnase inhibitor) CF57_RS02540 PF07338 Protein of unknown function (DUF1471) CF57_RS02545 PF01316 Arginine repressor, DNA binding domain CF57_RS02545 PF02863 Arginine repressor, C-terminal domain CF57_RS02550 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CF57_RS02550 PF00056 lactate/malate dehydrogenase, NAD binding domain CF57_RS02555 PF13180 PDZ domain CF57_RS02560 PF00595 PDZ domain CF57_RS02560 PF13180 PDZ domain CF57_RS02565 PF06295 Protein of unknown function (DUF1043) CF57_RS02570 PF03969 AFG1-like ATPase CF57_RS02575 PF00572 Ribosomal protein L13 CF57_RS02580 PF00380 Ribosomal protein S9/S16 CF57_RS02585 PF00043 Glutathione S-transferase, C-terminal domain CF57_RS02585 PF02798 Glutathione S-transferase, N-terminal domain CF57_RS02590 PF04386 Stringent starvation protein B CF57_RS02595 PF03606 C4-dicarboxylate anaerobic carrier CF57_RS02600 PF07729 FCD domain CF57_RS02600 PF00392 Bacterial regulatory proteins, gntR family CF57_RS02605 PF00701 Dihydrodipicolinate synthetase family CF57_RS02610 PF07690 Major Facilitator Superfamily CF57_RS02615 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CF57_RS02620 PF00480 ROK family CF57_RS02625 PF04074 YhcH/YjgK/YiaL CF57_RS02635 PF06250 YhcG PDDEXK nuclease domain CF57_RS02635 PF17761 DUF1016 N-terminal domain CF57_RS02640 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CF57_RS02640 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF57_RS02645 PF01493 GXGXG motif CF57_RS02645 PF04898 Glutamate synthase central domain CF57_RS02645 PF00310 Glutamine amidotransferases class-II CF57_RS02645 PF01645 Conserved region in glutamate synthase CF57_RS02650 PF16199 Radical_SAM C-terminal domain CF57_RS02650 PF04055 Radical SAM superfamily CF57_RS02655 PF01627 Hpt domain CF57_RS02655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS02655 PF18415 Histidine kinase receptor ArcB trans-membrane domain CF57_RS02655 PF00072 Response regulator receiver domain CF57_RS02655 PF00989 PAS fold CF57_RS02655 PF00512 His Kinase A (phospho-acceptor) domain CF57_RS02665 PF00912 Transglycosylase CF57_RS02670 PF10707 PhoP regulatory network protein YrbL CF57_RS02675 PF00381 PTS HPr component phosphorylation site CF57_RS02680 PF03668 P-loop ATPase protein family CF57_RS02685 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF57_RS02690 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CF57_RS02695 PF00309 Sigma-54 factor, Activator interacting domain (AID) CF57_RS02695 PF04963 Sigma-54 factor, core binding domain CF57_RS02695 PF04552 Sigma-54, DNA binding domain CF57_RS02700 PF00005 ABC transporter CF57_RS02700 PF12399 Branched-chain amino acid ATP-binding cassette transporter CF57_RS02705 PF03968 OstA-like protein CF57_RS02710 PF06835 Lipopolysaccharide-assembly, LptC-related CF57_RS02720 PF00571 CBS domain CF57_RS02720 PF01380 SIS domain CF57_RS02725 PF01699 Sodium/calcium exchanger protein CF57_RS02730 PF00005 ABC transporter CF57_RS02735 PF02405 Permease MlaE CF57_RS02740 PF02470 MlaD protein CF57_RS02745 PF05494 MlaC protein CF57_RS02750 PF13466 STAS domain CF57_RS02755 PF01722 BolA-like protein CF57_RS02760 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CF57_RS02765 PF13693 Winged helix-turn-helix DNA-binding CF57_RS02770 PF00348 Polyprenyl synthetase CF57_RS02775 PF00829 Ribosomal prokaryotic L21 protein CF57_RS02780 PF01016 Ribosomal L27 protein CF57_RS02785 PF00892 EamA-like transporter family CF57_RS02790 PF01926 50S ribosome-binding GTPase CF57_RS02790 PF01018 GTP1/OBG CF57_RS02795 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CF57_RS02800 PF01272 Transcription elongation factor, GreA/GreB, C-term CF57_RS02800 PF03449 Transcription elongation factor, N-terminal CF57_RS02805 PF01985 CRS1 / YhbY (CRM) domain CF57_RS02810 PF01728 FtsJ-like methyltransferase CF57_RS02815 PF00004 ATPase family associated with various cellular activities (AAA) CF57_RS02815 PF17862 AAA+ lid domain CF57_RS02815 PF06480 FtsH Extracellular CF57_RS02815 PF01434 Peptidase family M41 CF57_RS02820 PF00809 Pterin binding enzyme CF57_RS02825 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CF57_RS02825 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CF57_RS02825 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CF57_RS02825 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CF57_RS02830 PF03840 Preprotein translocase SecG subunit CF57_RS02840 PF00884 Sulfatase CF57_RS02845 PF00764 Arginosuccinate synthase CF57_RS02855 PF02576 RimP N-terminal domain CF57_RS02855 PF17384 RimP C-terminal SH3 domain CF57_RS02860 PF13184 NusA-like KH domain CF57_RS02860 PF08529 NusA N-terminal domain CF57_RS02860 PF00575 S1 RNA binding domain CF57_RS02865 PF00009 Elongation factor Tu GTP binding domain CF57_RS02865 PF11987 Translation-initiation factor 2 CF57_RS02865 PF08364 Bacterial translation initiation factor IF-2 associated region CF57_RS02865 PF04760 Translation initiation factor IF-2, N-terminal region CF57_RS02870 PF02033 Ribosome-binding factor A CF57_RS02875 PF09157 Pseudouridine synthase II TruB, C-terminal CF57_RS02875 PF16198 tRNA pseudouridylate synthase B C-terminal domain CF57_RS02875 PF01509 TruB family pseudouridylate synthase (N terminal domain) CF57_RS02880 PF00312 Ribosomal protein S15 CF57_RS02885 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CF57_RS02885 PF00013 KH domain CF57_RS02885 PF03725 3' exoribonuclease family, domain 2 CF57_RS02885 PF01138 3' exoribonuclease family, domain 1 CF57_RS02885 PF00575 S1 RNA binding domain CF57_RS02890 PF13181 Tetratricopeptide repeat CF57_RS02890 PF07719 Tetratricopeptide repeat CF57_RS02895 PF00271 Helicase conserved C-terminal domain CF57_RS02895 PF12343 Cold shock protein DEAD box A CF57_RS02895 PF03880 DbpA RNA binding domain CF57_RS02895 PF00270 DEAD/DEAH box helicase CF57_RS02905 PF03222 Tryptophan/tyrosine permease family CF57_RS02910 PF00296 Luciferase-like monooxygenase CF57_RS02915 PF01136 Peptidase family U32 CF57_RS02920 PF01136 Peptidase family U32 CF57_RS02925 PF02036 SCP-2 sterol transfer family CF57_RS02930 PF13508 Acetyltransferase (GNAT) domain CF57_RS02935 PF01541 GIY-YIG catalytic domain CF57_RS02945 PF01965 DJ-1/PfpI family CF57_RS02950 PF13460 NAD(P)H-binding CF57_RS02955 PF03773 Predicted permease CF57_RS02960 PF04972 BON domain CF57_RS02965 PF13580 SIS domain CF57_RS02970 PF02021 Uncharacterised protein family UPF0102 CF57_RS02975 PF04348 LppC putative lipoprotein CF57_RS02980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CF57_RS02985 PF00419 Fimbrial protein CF57_RS02990 PF13954 PapC N-terminal domain CF57_RS02990 PF00577 Outer membrane usher protein CF57_RS02990 PF13953 PapC C-terminal domain CF57_RS02995 PF02753 Pili assembly chaperone PapD, C-terminal domain CF57_RS02995 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF57_RS03000 PF00419 Fimbrial protein CF57_RS03005 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CF57_RS03010 PF03613 PTS system mannose/fructose/sorbose family IID component CF57_RS03015 PF03609 PTS system sorbose-specific iic component CF57_RS03020 PF03830 PTS system sorbose subfamily IIB component CF57_RS03025 PF01116 Fructose-bisphosphate aldolase class-II CF57_RS03030 PF01380 SIS domain CF57_RS03035 PF01979 Amidohydrolase family CF57_RS03040 PF03610 PTS system fructose IIA component CF57_RS03045 PF03613 PTS system mannose/fructose/sorbose family IID component CF57_RS03050 PF03609 PTS system sorbose-specific iic component CF57_RS03055 PF03830 PTS system sorbose subfamily IIB component CF57_RS03060 PF08013 Tagatose 6 phosphate kinase CF57_RS03065 PF00455 DeoR C terminal sensor domain CF57_RS03065 PF08220 DeoR-like helix-turn-helix domain CF57_RS03070 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system CF57_RS03075 PF15937 prlF antitoxin for toxin YhaV_toxin CF57_RS03080 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CF57_RS03080 PF08666 SAF domain CF57_RS03085 PF07690 Major Facilitator Superfamily CF57_RS03090 PF03328 HpcH/HpaI aldolase/citrate lyase family CF57_RS03095 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CF57_RS03095 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CF57_RS03100 PF02595 Glycerate kinase family CF57_RS03120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS03120 PF03466 LysR substrate binding domain CF57_RS03125 PF00291 Pyridoxal-phosphate dependent enzyme CF57_RS03130 PF03222 Tryptophan/tyrosine permease family CF57_RS03135 PF00871 Acetokinase family CF57_RS03140 PF01228 Glycine radical CF57_RS03140 PF02901 Pyruvate formate lyase-like CF57_RS03145 PF01042 Endoribonuclease L-PSP CF57_RS03150 PF03313 Serine dehydratase alpha chain CF57_RS03150 PF03315 Serine dehydratase beta chain CF57_RS03160 PF03313 Serine dehydratase alpha chain CF57_RS03170 PF17954 Quercetinase C-terminal cupin domain CF57_RS03170 PF02678 Pirin CF57_RS03175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS03175 PF03466 LysR substrate binding domain CF57_RS03180 PF05656 Protein of unknown function (DUF805) CF57_RS03185 PF05656 Protein of unknown function (DUF805) CF57_RS03190 PF13409 Glutathione S-transferase, N-terminal domain CF57_RS03195 PF07681 DoxX CF57_RS03200 PF13997 YqjK-like protein CF57_RS03205 PF07332 Putative Actinobacterial Holin-X, holin superfamily III CF57_RS03210 PF05957 Bacterial protein of unknown function (DUF883) CF57_RS03215 PF06476 Protein of unknown function (DUF1090) CF57_RS03220 PF13721 SecD export protein N-terminal TM region CF57_RS03225 PF09335 SNARE associated Golgi protein CF57_RS03230 PF00392 Bacterial regulatory proteins, gntR family CF57_RS03230 PF07729 FCD domain CF57_RS03240 PF04449 CS1 type fimbrial major subunit CF57_RS03245 PF15976 CS1-pili formation C-terminal CF57_RS03245 PF16967 E-set like domain CF57_RS03245 PF17271 TcfC Usher-like barrel domain CF57_RS03255 PF07690 Major Facilitator Superfamily CF57_RS03260 PF02614 Glucuronate isomerase CF57_RS03265 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CF57_RS03265 PF08666 SAF domain CF57_RS03270 PF10688 Bacterial inner membrane protein CF57_RS03275 PF00375 Sodium:dicarboxylate symporter family CF57_RS03280 PF03741 Integral membrane protein TerC family CF57_RS03285 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CF57_RS03290 PF02698 DUF218 domain CF57_RS03295 PF01863 Protein of unknown function DUF45 CF57_RS03300 PF05175 Methyltransferase small domain CF57_RS03310 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system CF57_RS03315 PF01381 Helix-turn-helix CF57_RS03320 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF57_RS03320 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CF57_RS03325 PF01204 Trehalase CF57_RS03335 PF13520 Amino acid permease CF57_RS03340 PF04074 YhcH/YjgK/YiaL CF57_RS03345 PF16353 Domain of unknown function(DUF4981) CF57_RS03345 PF00703 Glycosyl hydrolases family 2 CF57_RS03345 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CF57_RS03345 PF02837 Glycosyl hydrolases family 2, sugar binding domain CF57_RS03345 PF02929 Beta galactosidase small chain CF57_RS03350 PF00356 Bacterial regulatory proteins, lacI family CF57_RS03355 PF01588 Putative tRNA binding domain CF57_RS03360 PF00202 Aminotransferase class-III CF57_RS03365 PF08447 PAS fold CF57_RS03365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CF57_RS03370 PF03551 Transcriptional regulator PadR-like family CF57_RS03375 PF08021 Siderophore-interacting FAD-binding domain CF57_RS03375 PF04954 Siderophore-interacting protein CF57_RS03385 PF03167 Uracil DNA glycosylase superfamily CF57_RS03390 PF04545 Sigma-70, region 4 CF57_RS03390 PF04542 Sigma-70 region 2 CF57_RS03390 PF00140 Sigma-70 factor, region 1.2 CF57_RS03390 PF04539 Sigma-70 region 3 CF57_RS03390 PF04546 Sigma-70, non-essential region CF57_RS03390 PF03979 Sigma-70 factor, region 1.1 CF57_RS03395 PF01807 CHC2 zinc finger CF57_RS03395 PF10410 DnaB-helicase binding domain of primase CF57_RS03395 PF08278 DNA primase DnaG DnaB-binding CF57_RS03395 PF08275 DNA primase catalytic core, N-terminal domain CF57_RS03400 PF01165 Ribosomal protein S21 CF57_RS03405 PF00814 Glycoprotease family CF57_RS03410 PF00939 Sodium:sulfate symporter transmembrane region CF57_RS03415 PF05683 Fumarase C-terminus CF57_RS03420 PF05681 Fumarate hydratase (Fumerase) CF57_RS03425 PF03466 LysR substrate binding domain CF57_RS03425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS03430 PF02660 Glycerol-3-phosphate acyltransferase CF57_RS03435 PF02152 Dihydroneopterin aldolase CF57_RS03440 PF02673 Bacitracin resistance protein BacA CF57_RS03445 PF01966 HD domain CF57_RS03445 PF01743 Poly A polymerase head domain CF57_RS03445 PF12627 Probable RNA and SrmB- binding site of polymerase A CF57_RS03450 PF08239 Bacterial SH3 domain CF57_RS03460 PF01928 CYTH domain CF57_RS03465 PF08335 GlnD PII-uridylyltransferase CF57_RS03465 PF03710 Glutamate-ammonia ligase adenylyltransferase CF57_RS03470 PF00294 pfkB family carbohydrate kinase CF57_RS03470 PF01467 Cytidylyltransferase-like CF57_RS03485 PF15975 Flotillin CF57_RS03485 PF01145 SPFH domain / Band 7 family CF57_RS03490 PF07290 Protein of unknown function (DUF1449) CF57_RS03495 PF08971 Glycogen synthesis protein CF57_RS03505 PF02753 Pili assembly chaperone PapD, C-terminal domain CF57_RS03505 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF57_RS03510 PF00577 Outer membrane usher protein CF57_RS03510 PF13954 PapC N-terminal domain CF57_RS03510 PF13953 PapC C-terminal domain CF57_RS03515 PF00419 Fimbrial protein CF57_RS03520 PF04380 Membrane fusogenic activity CF57_RS03525 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CF57_RS03535 PF02535 ZIP Zinc transporter CF57_RS03540 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CF57_RS03545 PF03738 Glutathionylspermidine synthase preATP-grasp CF57_RS03550 PF06693 Protein of unknown function (DUF1190) CF57_RS03560 PF02321 Outer membrane efflux protein CF57_RS03565 PF00293 NUDIX domain CF57_RS03570 PF06853 Protein of unknown function (DUF1249) CF57_RS03575 PF00149 Calcineurin-like phosphoesterase CF57_RS03580 PF05728 Uncharacterised protein family (UPF0227) CF57_RS03585 PF01751 Toprim domain CF57_RS03585 PF00986 DNA gyrase B subunit, carboxyl terminus CF57_RS03585 PF00204 DNA gyrase B CF57_RS03585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS03590 PF03992 Antibiotic biosynthesis monooxygenase CF57_RS03595 PF02525 Flavodoxin-like fold CF57_RS03600 PF10840 Protein of unknown function (DUF2645) CF57_RS03605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS03605 PF00512 His Kinase A (phospho-acceptor) domain CF57_RS03605 PF08521 Two-component sensor kinase N-terminal CF57_RS03610 PF00486 Transcriptional regulatory protein, C terminal CF57_RS03610 PF00072 Response regulator receiver domain CF57_RS03615 PF04076 Bacterial OB fold (BOF) protein CF57_RS03620 PF06445 GyrI-like small molecule binding domain CF57_RS03625 PF15723 Motility quorum-sensing regulator, toxin of MqsA CF57_RS03630 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA CF57_RS03635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF57_RS03640 PF03989 DNA gyrase C-terminal domain, beta-propeller CF57_RS03640 PF00521 DNA gyrase/topoisomerase IV, subunit A CF57_RS03645 PF01553 Acyltransferase CF57_RS03650 PF07732 Multicopper oxidase CF57_RS03650 PF00394 Multicopper oxidase CF57_RS03650 PF07731 Multicopper oxidase CF57_RS03655 PF04055 Radical SAM superfamily CF57_RS03655 PF08497 Radical SAM N-terminal CF57_RS03655 PF11842 Domain of unknown function (DUF3362) CF57_RS03660 PF04728 Lipoprotein leucine-zipper CF57_RS03665 PF12883 Protein of unknown function (DUF3828) CF57_RS03670 PF00248 Aldo/keto reductase family CF57_RS03675 PF00465 Iron-containing alcohol dehydrogenase CF57_RS03685 PF12833 Helix-turn-helix domain CF57_RS03685 PF06719 AraC-type transcriptional regulator N-terminus CF57_RS03690 PF09335 SNARE associated Golgi protein CF57_RS03695 PF01053 Cys/Met metabolism PLP-dependent enzyme CF57_RS03705 PF01618 MotA/TolQ/ExbB proton channel family CF57_RS03710 PF02472 Biopolymer transport protein ExbD/TolR CF57_RS03720 PF03350 Uncharacterized protein family, UPF0114 CF57_RS03725 PF00248 Aldo/keto reductase family CF57_RS03735 PF11115 Protein of unknown function (DUF2623) CF57_RS03745 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CF57_RS03745 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CF57_RS03750 PF13247 4Fe-4S dicluster domain CF57_RS03755 PF03916 Polysulphide reductase, NrfD CF57_RS03760 PF00374 Nickel-dependent hydrogenase CF57_RS03765 PF01750 Hydrogenase maturation protease CF57_RS03770 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE CF57_RS03775 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CF57_RS03780 PF01455 HupF/HypC family CF57_RS03785 PF02798 Glutathione S-transferase, N-terminal domain CF57_RS03790 PF05257 CHAP domain CF57_RS03790 PF03738 Glutathionylspermidine synthase preATP-grasp CF57_RS03795 PF01384 Phosphate transporter family CF57_RS03815 PF01943 Polysaccharide biosynthesis protein CF57_RS03825 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CF57_RS03830 PF03739 Lipopolysaccharide export system permease LptF/LptG CF57_RS03840 PF00155 Aminotransferase class I and II CF57_RS03845 PF00550 Phosphopantetheine attachment site CF57_RS03855 PF14535 AMP-binding enzyme C-terminal domain CF57_RS03855 PF00501 AMP-binding enzyme CF57_RS03865 PF07729 FCD domain CF57_RS03865 PF00392 Bacterial regulatory proteins, gntR family CF57_RS03870 PF02913 FAD linked oxidases, C-terminal domain CF57_RS03870 PF01565 FAD binding domain CF57_RS03875 PF01565 FAD binding domain CF57_RS03880 PF13183 4Fe-4S dicluster domain CF57_RS03880 PF02754 Cysteine-rich domain CF57_RS03885 PF03928 Haem-degrading CF57_RS03890 PF01274 Malate synthase CF57_RS03895 PF02652 L-lactate permease CF57_RS03915 PF16549 Type II secretion system (T2SS) pilotin, S protein CF57_RS03920 PF11356 Type II secretion system protein C CF57_RS03925 PF03958 Bacterial type II/III secretion system short domain CF57_RS03925 PF00263 Bacterial type II and III secretion system protein CF57_RS03930 PF00437 Type II/IV secretion system protein CF57_RS03935 PF04612 Type II secretion system (T2SS), protein M CF57_RS03945 PF04474 Protein of unknown function (DUF554) CF57_RS03950 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CF57_RS03950 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CF57_RS03950 PF01276 Orn/Lys/Arg decarboxylase, major domain CF57_RS03955 PF03825 Nucleoside H+ symporter CF57_RS03960 PF01464 Transglycosylase SLT domain CF57_RS03960 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CF57_RS03965 PF04362 Bacterial Fe(2+) trafficking CF57_RS03970 PF14815 NUDIX domain CF57_RS03970 PF00730 HhH-GPD superfamily base excision DNA repair protein CF57_RS03970 PF00633 Helix-hairpin-helix motif CF57_RS03970 PF10576 Iron-sulfur binding domain of endonuclease III CF57_RS03975 PF02390 Putative methyltransferase CF57_RS03980 PF04320 Protein with unknown function (DUF469) CF57_RS03990 PF11101 Protein of unknown function (DUF2884) CF57_RS03995 PF00710 Asparaginase, N-terminal CF57_RS03995 PF17763 Glutaminase/Asparaginase C-terminal domain CF57_RS04000 PF06717 Protein of unknown function (DUF1202) CF57_RS04005 PF04055 Radical SAM superfamily CF57_RS04005 PF06969 HemN C-terminal domain CF57_RS04010 PF01725 Ham1 family CF57_RS04015 PF02594 Uncharacterised ACR, YggU family COG1872 CF57_RS04020 PF02325 YGGT family CF57_RS04025 PF01168 Alanine racemase, N-terminal domain CF57_RS04030 PF00437 Type II/IV secretion system protein CF57_RS04035 PF03652 Holliday junction resolvase CF57_RS04040 PF02622 Uncharacterized ACR, COG1678 CF57_RS04045 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CF57_RS04045 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CF57_RS04050 PF04452 RNA methyltransferase CF57_RS04055 PF04231 Endonuclease I CF57_RS04060 PF10263 SprT-like family CF57_RS04060 PF17283 SprT-like zinc ribbon domain CF57_RS04065 PF00083 Sugar (and other) transporter CF57_RS04070 PF02773 S-adenosylmethionine synthetase, C-terminal domain CF57_RS04070 PF02772 S-adenosylmethionine synthetase, central domain CF57_RS04070 PF00438 S-adenosylmethionine synthetase, N-terminal domain CF57_RS04080 PF17430 Uncharacterized YqgC-like CF57_RS04085 PF11036 Virulence promoting factor CF57_RS04090 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CF57_RS04090 PF17944 Arginine decarboxylase C-terminal helical extension CF57_RS04090 PF17810 Arginine decarboxylase helical bundle domain CF57_RS04095 PF00491 Arginase family CF57_RS04100 PF01435 Peptidase family M48 CF57_RS04105 PF02779 Transketolase, pyrimidine binding domain CF57_RS04105 PF00456 Transketolase, thiamine diphosphate binding domain CF57_RS04105 PF02780 Transketolase, C-terminal domain CF57_RS04110 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF57_RS04115 PF02378 Phosphotransferase system, EIIC CF57_RS04115 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF57_RS04120 PF00107 Zinc-binding dehydrogenase CF57_RS04120 PF08240 Alcohol dehydrogenase GroES-like domain CF57_RS04125 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CF57_RS04130 PF05068 Mannitol repressor CF57_RS04140 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CF57_RS04140 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CF57_RS04145 PF00162 Phosphoglycerate kinase CF57_RS04150 PF01116 Fructose-bisphosphate aldolase class-II CF57_RS04155 PF00924 Mechanosensitive ion channel CF57_RS04155 PF05552 Conserved TM helix CF57_RS04160 PF01810 LysE type translocator CF57_RS04165 PF04402 Protein of unknown function (DUF541) CF57_RS04170 PF03466 LysR substrate binding domain CF57_RS04170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS04175 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CF57_RS04175 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CF57_RS04180 PF00378 Enoyl-CoA hydratase/isomerase CF57_RS04190 PF01642 Methylmalonyl-CoA mutase CF57_RS04190 PF02310 B12 binding domain CF57_RS04195 PF03466 LysR substrate binding domain CF57_RS04195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS04200 PF03466 LysR substrate binding domain CF57_RS04205 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CF57_RS04210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CF57_RS04210 PF01842 ACT domain CF57_RS04210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CF57_RS04215 PF01812 5-formyltetrahydrofolate cyclo-ligase family CF57_RS04220 PF05164 Cell division protein ZapA CF57_RS04225 PF03695 Uncharacterised protein family (UPF0149) CF57_RS04230 PF00557 Metallopeptidase family M24 CF57_RS04230 PF05195 Aminopeptidase P, N-terminal domain CF57_RS04235 PF01494 FAD binding domain CF57_RS04240 PF01494 FAD binding domain CF57_RS04245 PF01571 Aminomethyltransferase folate-binding domain CF57_RS04245 PF08669 Glycine cleavage T-protein C-terminal barrel domain CF57_RS04250 PF01597 Glycine cleavage H-protein CF57_RS04255 PF02347 Glycine cleavage system P-protein CF57_RS04260 PF00232 Glycosyl hydrolase family 1 CF57_RS04265 PF04266 ASCH domain CF57_RS04270 PF03006 Haemolysin-III related CF57_RS04275 PF01571 Aminomethyltransferase folate-binding domain CF57_RS04280 PF03937 Flavinator of succinate dehydrogenase CF57_RS04285 PF07254 Membrane-bound toxin component of toxin-antitoxin system CF57_RS04290 PF00258 Flavodoxin CF57_RS04295 PF02899 Phage integrase, N-terminal SAM-like domain CF57_RS04295 PF00589 Phage integrase family CF57_RS04300 PF13098 Thioredoxin-like domain CF57_RS04300 PF10411 Disulfide bond isomerase protein N-terminus CF57_RS04305 PF17768 RecJ OB domain CF57_RS04305 PF02272 DHHA1 domain CF57_RS04305 PF01368 DHH family CF57_RS04310 PF03462 PCRF domain CF57_RS04310 PF00472 RF-1 domain CF57_RS04315 PF01336 OB-fold nucleic acid binding domain CF57_RS04315 PF00152 tRNA synthetases class II (D, K and N) CF57_RS04320 PF00293 NUDIX domain CF57_RS04330 PF00860 Permease family CF57_RS04340 PF13247 4Fe-4S dicluster domain CF57_RS04340 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CF57_RS04340 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF57_RS04345 PF13247 4Fe-4S dicluster domain CF57_RS04350 PF00860 Permease family CF57_RS04355 PF01979 Amidohydrolase family CF57_RS04360 PF01527 Transposase CF57_RS04365 PF13276 HTH-like domain CF57_RS04365 PF00665 Integrase core domain CF57_RS04370 PF00860 Permease family CF57_RS04375 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CF57_RS04375 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CF57_RS04375 PF01799 [2Fe-2S] binding domain CF57_RS04380 PF00941 FAD binding domain in molybdopterin dehydrogenase CF57_RS04385 PF01979 Amidohydrolase family CF57_RS04390 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CF57_RS04390 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF57_RS04395 PF12804 MobA-like NTP transferase domain CF57_RS04410 PF00696 Amino acid kinase family CF57_RS04415 PF01979 Amidohydrolase family CF57_RS04420 PF01546 Peptidase family M20/M25/M40 CF57_RS04420 PF07687 Peptidase dimerisation domain CF57_RS04425 PF00291 Pyridoxal-phosphate dependent enzyme CF57_RS04430 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CF57_RS04430 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CF57_RS04435 PF00158 Sigma-54 interaction domain CF57_RS04435 PF02954 Bacterial regulatory protein, Fis family CF57_RS04435 PF13188 PAS domain CF57_RS04440 PF01799 [2Fe-2S] binding domain CF57_RS04440 PF00111 2Fe-2S iron-sulfur cluster binding domain CF57_RS04445 PF00941 FAD binding domain in molybdopterin dehydrogenase CF57_RS04445 PF03450 CO dehydrogenase flavoprotein C-terminal domain CF57_RS04450 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CF57_RS04450 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CF57_RS04455 PF01476 LysM domain CF57_RS04455 PF01551 Peptidase family M23 CF57_RS04480 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CF57_RS04485 PF00813 FliP family CF57_RS04490 PF01313 Bacterial export proteins, family 3 CF57_RS04495 PF01311 Bacterial export proteins, family 1 CF57_RS04500 PF01312 FlhB HrpN YscU SpaS Family CF57_RS04505 PF01312 FlhB HrpN YscU SpaS Family CF57_RS04520 PF09480 Type III secretion system protein PrgH-EprH (PrgH) CF57_RS04535 PF01514 Secretory protein of YscJ/FliF family CF57_RS04540 PF00196 Bacterial regulatory proteins, luxR family CF57_RS04540 PF00072 Response regulator receiver domain CF57_RS04545 PF01464 Transglycosylase SLT domain CF57_RS04555 PF00486 Transcriptional regulatory protein, C terminal CF57_RS04560 PF07720 Tetratricopeptide repeat CF57_RS04595 PF00196 Bacterial regulatory proteins, luxR family CF57_RS04600 PF03222 Tryptophan/tyrosine permease family CF57_RS04605 PF02803 Thiolase, C-terminal domain CF57_RS04605 PF00108 Thiolase, N-terminal domain CF57_RS04610 PF04962 KduI/IolB family CF57_RS04620 PF00083 Sugar (and other) transporter CF57_RS04625 PF01177 Asp/Glu/Hydantoin racemase CF57_RS04630 PF03466 LysR substrate binding domain CF57_RS04630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS04635 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CF57_RS04635 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CF57_RS04640 PF00356 Bacterial regulatory proteins, lacI family CF57_RS04645 PF00501 AMP-binding enzyme CF57_RS04645 PF01553 Acyltransferase CF57_RS04650 PF07690 Major Facilitator Superfamily CF57_RS04655 PF00248 Aldo/keto reductase family CF57_RS04660 PF06004 Bacterial protein of unknown function (DUF903) CF57_RS04665 PF03741 Integral membrane protein TerC family CF57_RS04670 PF02976 DNA mismatch repair enzyme MutH CF57_RS04685 PF00293 NUDIX domain CF57_RS04690 PF00391 PEP-utilising enzyme, mobile domain CF57_RS04690 PF01590 GAF domain CF57_RS04690 PF05524 PEP-utilising enzyme, N-terminal CF57_RS04690 PF02896 PEP-utilising enzyme, TIM barrel domain CF57_RS04695 PF01790 Prolipoprotein diacylglyceryl transferase CF57_RS04700 PF00303 Thymidylate synthase CF57_RS04705 PF07963 Prokaryotic N-terminal methylation motif CF57_RS04710 PF07963 Prokaryotic N-terminal methylation motif CF57_RS04715 PF10713 Protein of unknown function (DUF2509) CF57_RS04720 PF12528 Type II secretion prepilin peptidase dependent protein C CF57_RS04720 PF07963 Prokaryotic N-terminal methylation motif CF57_RS04725 PF17946 RecC C-terminal domain CF57_RS04730 PF05193 Peptidase M16 inactive domain CF57_RS04730 PF00675 Insulinase (Peptidase family M16) CF57_RS04730 PF16187 Middle or third domain of peptidase_M16 CF57_RS04735 PF13361 UvrD-like helicase C-terminal domain CF57_RS04735 PF12705 PD-(D/E)XK nuclease superfamily CF57_RS04735 PF00580 UvrD/REP helicase N-terminal domain CF57_RS04740 PF13538 UvrD-like helicase C-terminal domain CF57_RS04745 PF00583 Acetyltransferase (GNAT) family CF57_RS04745 PF00696 Amino acid kinase family CF57_RS04750 PF11741 AMIN domain CF57_RS04750 PF01520 N-acetylmuramoyl-L-alanine amidase CF57_RS04770 PF06725 3D domain CF57_RS04770 PF03562 MltA specific insert domain CF57_RS04775 PF00899 ThiF family CF57_RS04780 PF02657 Fe-S metabolism associated domain CF57_RS04785 PF00266 Aminotransferase class-V CF57_RS04790 PF06004 Bacterial protein of unknown function (DUF903) CF57_RS04795 PF03466 LysR substrate binding domain CF57_RS04795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS04800 PF04241 Protein of unknown function (DUF423) CF57_RS04805 PF01728 FtsJ-like methyltransferase CF57_RS04805 PF18125 RlmM ferredoxin-like domain CF57_RS04810 PF08220 DeoR-like helix-turn-helix domain CF57_RS04810 PF00455 DeoR C terminal sensor domain CF57_RS04815 PF05025 RbsD / FucU transport protein family CF57_RS04820 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CF57_RS04820 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CF57_RS04825 PF02952 L-fucose isomerase, C-terminal domain CF57_RS04825 PF07882 L-fucose isomerase, second N-terminal domain CF57_RS04825 PF07881 L-fucose isomerase, first N-terminal domain CF57_RS04830 PF07690 Major Facilitator Superfamily CF57_RS04835 PF00596 Class II Aldolase and Adducin N-terminal domain CF57_RS04840 PF00465 Iron-containing alcohol dehydrogenase CF57_RS04845 PF01367 5'-3' exonuclease, C-terminal SAM fold CF57_RS04845 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CF57_RS04850 PF03315 Serine dehydratase beta chain CF57_RS04850 PF03313 Serine dehydratase alpha chain CF57_RS04860 PF11892 Domain of unknown function (DUF3412) CF57_RS04860 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CF57_RS04860 PF03641 Possible lysine decarboxylase CF57_RS04865 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CF57_RS04865 PF14489 QueF-like protein CF57_RS04870 PF07348 Syd protein (SUKH-2) CF57_RS04880 PF04287 tRNA pseudouridine synthase C CF57_RS04885 PF00849 RNA pseudouridylate synthase CF57_RS04890 PF00258 Flavodoxin CF57_RS04895 PF07690 Major Facilitator Superfamily CF57_RS04900 PF13378 Enolase C-terminal domain-like CF57_RS04905 PF00512 His Kinase A (phospho-acceptor) domain CF57_RS04905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS04905 PF00672 HAMP domain CF57_RS04905 PF01627 Hpt domain CF57_RS04905 PF00072 Response regulator receiver domain CF57_RS04905 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CF57_RS04910 PF05958 tRNA (Uracil-5-)-methyltransferase CF57_RS04910 PF01938 TRAM domain CF57_RS04915 PF02824 TGS domain CF57_RS04915 PF04607 Region found in RelA / SpoT proteins CF57_RS04915 PF13291 ACT domain CF57_RS04920 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CF57_RS04925 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CF57_RS04930 PF03819 MazG nucleotide pyrophosphohydrolase domain CF57_RS04935 PF06418 CTP synthase N-terminus CF57_RS04935 PF00117 Glutamine amidotransferase class-I CF57_RS04940 PF00113 Enolase, C-terminal TIM barrel domain CF57_RS04940 PF03952 Enolase, N-terminal domain CF57_RS04945 PF04536 TPM domain CF57_RS04955 PF04055 Radical SAM superfamily CF57_RS04960 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CF57_RS04960 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CF57_RS04965 PF07690 Major Facilitator Superfamily CF57_RS04975 PF01565 FAD binding domain CF57_RS04975 PF02913 FAD linked oxidases, C-terminal domain CF57_RS04980 PF00083 Sugar (and other) transporter CF57_RS04985 PF01012 Electron transfer flavoprotein domain CF57_RS04990 PF00766 Electron transfer flavoprotein FAD-binding domain CF57_RS04990 PF01012 Electron transfer flavoprotein domain CF57_RS04995 PF04309 Glycerol-3-phosphate responsive antiterminator CF57_RS05005 PF01266 FAD dependent oxidoreductase CF57_RS05010 PF01242 6-pyruvoyl tetrahydropterin synthase CF57_RS05015 PF00258 Flavodoxin CF57_RS05015 PF00175 Oxidoreductase NAD-binding domain CF57_RS05015 PF00667 FAD binding domain CF57_RS05020 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CF57_RS05020 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CF57_RS05025 PF01507 Phosphoadenosine phosphosulfate reductase family CF57_RS05030 PF00270 DEAD/DEAH box helicase CF57_RS05030 PF18019 HD domain CF57_RS05030 PF00271 Helicase conserved C-terminal domain CF57_RS05035 PF01527 Transposase CF57_RS05040 PF13276 HTH-like domain CF57_RS05040 PF00665 Integrase core domain CF57_RS05040 PF13333 Integrase core domain CF57_RS05045 PF00270 DEAD/DEAH box helicase CF57_RS05045 PF18019 HD domain CF57_RS05045 PF00271 Helicase conserved C-terminal domain CF57_RS05050 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) CF57_RS05055 PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) CF57_RS05060 PF09344 CT1975-like protein CF57_RS05065 PF09704 CRISPR-associated protein (Cas_Cas5) CF57_RS05070 PF08798 CRISPR associated protein CF57_RS05075 PF01867 CRISPR associated protein Cas1 CF57_RS05080 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) CF57_RS05085 PF04389 Peptidase family M28 CF57_RS05090 PF01507 Phosphoadenosine phosphosulfate reductase family CF57_RS05095 PF00009 Elongation factor Tu GTP binding domain CF57_RS05105 PF12084 Protein of unknown function (DUF3561) CF57_RS05110 PF04977 Septum formation initiator CF57_RS05115 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CF57_RS05120 PF02542 YgbB family CF57_RS05125 PF01142 tRNA pseudouridine synthase D (TruD) CF57_RS05130 PF01975 Survival protein SurE CF57_RS05140 PF01551 Peptidase family M23 CF57_RS05140 PF01476 LysM domain CF57_RS05145 PF04542 Sigma-70 region 2 CF57_RS05145 PF04545 Sigma-70, region 4 CF57_RS05145 PF04539 Sigma-70 region 3 CF57_RS05145 PF00140 Sigma-70 factor, region 1.2 CF57_RS05150 PF02447 GntP family permease CF57_RS05155 PF01261 Xylose isomerase-like TIM barrel CF57_RS05160 PF00596 Class II Aldolase and Adducin N-terminal domain CF57_RS05165 PF17042 Nucleotide-binding C-terminal domain CF57_RS05165 PF07005 Sugar-binding N-terminal domain CF57_RS05170 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CF57_RS05170 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CF57_RS05175 PF00455 DeoR C terminal sensor domain CF57_RS05175 PF08220 DeoR-like helix-turn-helix domain CF57_RS05180 PF00149 Calcineurin-like phosphoesterase CF57_RS05185 PF05190 MutS family domain IV CF57_RS05185 PF05192 MutS domain III CF57_RS05185 PF01624 MutS domain I CF57_RS05185 PF05188 MutS domain II CF57_RS05185 PF00488 MutS domain V CF57_RS05195 PF11756 Nitrous oxide-stimulated promoter CF57_RS05200 PF01590 GAF domain CF57_RS05200 PF00158 Sigma-54 interaction domain CF57_RS05205 PF02769 AIR synthase related protein, C-terminal domain CF57_RS05205 PF00586 AIR synthase related protein, N-terminal domain CF57_RS05210 PF01924 Hydrogenase formation hypA family CF57_RS05215 PF01455 HupF/HypC family CF57_RS05220 PF02492 CobW/HypB/UreG, nucleotide-binding domain CF57_RS05225 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CF57_RS05230 PF11046 Transcriptional repressor of hyc and hyp operons CF57_RS05240 PF13247 4Fe-4S dicluster domain CF57_RS05245 PF00361 Proton-conducting membrane transporter CF57_RS05250 PF00146 NADH dehydrogenase CF57_RS05255 PF00374 Nickel-dependent hydrogenase CF57_RS05255 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CF57_RS05255 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CF57_RS05260 PF12838 4Fe-4S dicluster domain CF57_RS05265 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CF57_RS05270 PF07450 Formate hydrogenlyase maturation protein HycH CF57_RS05275 PF01750 Hydrogenase maturation protease CF57_RS05280 PF00232 Glycosyl hydrolase family 1 CF57_RS05285 PF02378 Phosphotransferase system, EIIC CF57_RS05285 PF00367 phosphotransferase system, EIIB CF57_RS05290 PF00356 Bacterial regulatory proteins, lacI family CF57_RS05295 PF12800 4Fe-4S binding domain CF57_RS05295 PF13247 4Fe-4S dicluster domain CF57_RS05300 PF07503 HypF finger CF57_RS05300 PF17788 HypF Kae1-like domain CF57_RS05300 PF00708 Acylphosphatase CF57_RS05300 PF01300 Telomere recombination CF57_RS05305 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF57_RS05305 PF18113 Rubredoxin binding C-terminal domain CF57_RS05310 PF00258 Flavodoxin CF57_RS05310 PF00753 Metallo-beta-lactamase superfamily CF57_RS05310 PF00301 Rubredoxin CF57_RS05315 PF01590 GAF domain CF57_RS05315 PF00158 Sigma-54 interaction domain CF57_RS05320 PF00571 CBS domain CF57_RS05320 PF01380 SIS domain CF57_RS05325 PF00455 DeoR C terminal sensor domain CF57_RS05325 PF08220 DeoR-like helix-turn-helix domain CF57_RS05330 PF06923 Glucitol operon activator protein (GutM) CF57_RS05335 PF00106 short chain dehydrogenase CF57_RS05340 PF03829 PTS system glucitol/sorbitol-specific IIA component CF57_RS05345 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CF57_RS05345 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CF57_RS05350 PF03608 PTS system enzyme II sorbitol-specific factor CF57_RS05355 PF13406 Transglycosylase SLT domain CF57_RS05360 PF02464 Competence-damaged protein CF57_RS05365 PF00154 recA bacterial DNA recombination protein CF57_RS05370 PF02631 RecX family CF57_RS05380 PF02272 DHHA1 domain CF57_RS05380 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CF57_RS05380 PF01411 tRNA synthetases class II (A) CF57_RS05385 PF02599 Global regulator protein family CF57_RS05415 PF13419 Haloacid dehalogenase-like hydrolase CF57_RS05420 PF09335 SNARE associated Golgi protein CF57_RS05425 PF04262 Glutamate-cysteine ligase CF57_RS05430 PF02664 S-Ribosylhomocysteinase (LuxS) CF57_RS05435 PF07690 Major Facilitator Superfamily CF57_RS05440 PF00529 HlyD membrane-fusion protein of T1SS CF57_RS05440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF57_RS05445 PF01047 MarR family CF57_RS05450 PF05437 Branched-chain amino acid transport protein (AzlD) CF57_RS05455 PF03591 AzlC protein CF57_RS05460 PF07690 Major Facilitator Superfamily CF57_RS05465 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CF57_RS05470 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS05475 PF00571 CBS domain CF57_RS05475 PF00005 ABC transporter CF57_RS05480 PF00268 Ribonucleotide reductase, small chain CF57_RS05485 PF02867 Ribonucleotide reductase, barrel domain CF57_RS05485 PF00317 Ribonucleotide reductase, all-alpha domain CF57_RS05485 PF08343 Ribonucleotide reductase N-terminal CF57_RS05490 PF07972 NrdI Flavodoxin like CF57_RS05495 PF00462 Glutaredoxin CF57_RS05500 PF05957 Bacterial protein of unknown function (DUF883) CF57_RS05505 PF09400 Protein of unknown function (DUF2002) CF57_RS05510 PF06610 L-alanine exporter CF57_RS05515 PF00816 H-NS histone family CF57_RS05520 PF11127 Protein of unknown function (DUF2892) CF57_RS05520 PF00581 Rhodanese-like domain CF57_RS05525 PF01022 Bacterial regulatory protein, arsR family CF57_RS05530 PF01679 Proteolipid membrane potential modulator CF57_RS05535 PF04972 BON domain CF57_RS05535 PF01476 LysM domain CF57_RS05540 PF00392 Bacterial regulatory proteins, gntR family CF57_RS05540 PF07729 FCD domain CF57_RS05545 PF00324 Amino acid permease CF57_RS05550 PF00202 Aminotransferase class-III CF57_RS05555 PF00171 Aldehyde dehydrogenase family CF57_RS05560 PF01266 FAD dependent oxidoreductase CF57_RS05565 PF08943 CsiD CF57_RS05570 PF00128 Alpha amylase, catalytic domain CF57_RS05575 PF00128 Alpha amylase, catalytic domain CF57_RS05585 PF03400 IS1 transposase CF57_RS05590 PF18766 SWI2/SNF2 ATPase CF57_RS05590 PF11867 Domain of unknown function (DUF3387) CF57_RS05590 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CF57_RS05600 PF02384 N-6 DNA Methylase CF57_RS05610 PF17762 HTH domain found in ParB protein CF57_RS05610 PF02195 ParB-like nuclease domain CF57_RS05625 PF01668 SmpB protein CF57_RS05630 PF03364 Polyketide cyclase / dehydrase and lipid transport CF57_RS05635 PF03658 RnfH family Ubiquitin CF57_RS05640 PF04355 SmpA / OmlA family CF57_RS05645 PF02463 RecF/RecN/SMC N terminal domain CF57_RS05650 PF01513 ATP-NAD kinase CF57_RS05655 PF01025 GrpE CF57_RS05660 PF03471 Transporter associated domain CF57_RS05660 PF01595 Cyclin M transmembrane N-terminal domain CF57_RS05660 PF00571 CBS domain CF57_RS05665 PF01578 Cytochrome C assembly protein CF57_RS05670 PF00448 SRP54-type protein, GTPase domain CF57_RS05670 PF02978 Signal peptide binding domain CF57_RS05670 PF02881 SRP54-type protein, helical bundle domain CF57_RS05675 PF00886 Ribosomal protein S16 CF57_RS05680 PF01782 RimM N-terminal domain CF57_RS05680 PF05239 PRC-barrel domain CF57_RS05685 PF01746 tRNA (Guanine-1)-methyltransferase CF57_RS05690 PF01245 Ribosomal protein L19 CF57_RS05695 PF00691 OmpA family CF57_RS05700 PF17152 Periplasmic sensor domain CF57_RS05700 PF00990 Diguanylate cyclase, GGDEF domain CF57_RS05705 PF13689 YfiR/HmsC-like CF57_RS05710 PF10973 Protein of unknown function (DUF2799) CF57_RS05715 PF00793 DAHP synthetase I family CF57_RS05720 PF02153 Prephenate dehydrogenase CF57_RS05720 PF01817 Chorismate mutase type II CF57_RS05725 PF01817 Chorismate mutase type II CF57_RS05725 PF00800 Prephenate dehydratase CF57_RS05730 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CF57_RS05740 PF13525 Outer membrane lipoprotein CF57_RS05745 PF00849 RNA pseudouridylate synthase CF57_RS05745 PF01479 S4 domain CF57_RS05750 PF02578 Multi-copper polyphenol oxidoreductase laccase CF57_RS05755 PF00004 ATPase family associated with various cellular activities (AAA) CF57_RS05755 PF07724 AAA domain (Cdc48 subfamily) CF57_RS05755 PF17871 AAA lid domain CF57_RS05755 PF02861 Clp amino terminal domain, pathogenicity island component CF57_RS05755 PF10431 C-terminal, D2-small domain, of ClpB protein CF57_RS05785 PF00083 Sugar (and other) transporter CF57_RS05790 PF00083 Sugar (and other) transporter CF57_RS05795 PF10043 Predicted periplasmic lipoprotein (DUF2279) CF57_RS05805 PF13607 Succinyl-CoA ligase like flavodoxin domain CF57_RS05805 PF00583 Acetyltransferase (GNAT) family CF57_RS05805 PF13380 CoA binding domain CF57_RS05810 PF03942 DTW domain CF57_RS05815 PF00085 Thioredoxin CF57_RS05825 PF08032 RNA 2'-O ribose methyltransferase substrate binding CF57_RS05825 PF00588 SpoU rRNA Methylase family CF57_RS05830 PF03167 Uracil DNA glycosylase superfamily CF57_RS05835 PF01228 Glycine radical CF57_RS05840 PF01810 LysE type translocator CF57_RS05845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS05845 PF03466 LysR substrate binding domain CF57_RS05855 PF00271 Helicase conserved C-terminal domain CF57_RS05855 PF00270 DEAD/DEAH box helicase CF57_RS05860 PF05175 Methyltransferase small domain CF57_RS05865 PF00890 FAD binding domain CF57_RS05865 PF02910 Fumarate reductase flavoprotein C-term CF57_RS05875 PF08281 Sigma-70, region 4 CF57_RS05875 PF04542 Sigma-70 region 2 CF57_RS05880 PF03872 Anti sigma-E protein RseA, N-terminal domain CF57_RS05880 PF03873 Anti sigma-E protein RseA, C-terminal domain CF57_RS05885 PF17188 MucB/RseB C-terminal domain CF57_RS05885 PF03888 MucB/RseB N-terminal domain CF57_RS05895 PF06421 GTP-binding protein LepA C-terminus CF57_RS05895 PF03144 Elongation factor Tu domain 2 CF57_RS05895 PF00009 Elongation factor Tu GTP binding domain CF57_RS05895 PF00679 Elongation factor G C-terminus CF57_RS05900 PF10502 Signal peptidase, peptidase S26 CF57_RS05905 PF14622 Ribonuclease-III-like CF57_RS05905 PF00035 Double-stranded RNA binding motif CF57_RS05910 PF07650 KH domain CF57_RS05910 PF01926 50S ribosome-binding GTPase CF57_RS05915 PF02565 Recombination protein O C terminal CF57_RS05915 PF11967 Recombination protein O N terminal CF57_RS05920 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CF57_RS05925 PF01648 4'-phosphopantetheinyl transferase superfamily CF57_RS05945 PF12838 4Fe-4S dicluster domain CF57_RS05950 PF01380 SIS domain CF57_RS05950 PF01418 Helix-turn-helix domain, rpiR family CF57_RS05960 PF14437 MafB19-like deaminase CF57_RS05965 PF01464 Transglycosylase SLT domain CF57_RS05965 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF57_RS05970 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CF57_RS05970 PF02769 AIR synthase related protein, C-terminal domain CF57_RS05970 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CF57_RS05975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS05975 PF00512 His Kinase A (phospho-acceptor) domain CF57_RS05980 PF13942 YfhG lipoprotein CF57_RS05985 PF00158 Sigma-54 interaction domain CF57_RS05985 PF00072 Response regulator receiver domain CF57_RS05990 PF00543 Nitrogen regulatory protein P-II CF57_RS05995 PF00175 Oxidoreductase NAD-binding domain CF57_RS05995 PF00042 Globin CF57_RS05995 PF00970 Oxidoreductase FAD-binding domain CF57_RS06000 PF00464 Serine hydroxymethyltransferase CF57_RS06005 PF00480 ROK family CF57_RS06010 PF13181 Tetratricopeptide repeat CF57_RS06010 PF17128 Domain of unknown function (DUF5107) CF57_RS06015 PF13407 Periplasmic binding protein domain CF57_RS06020 PF00005 ABC transporter CF57_RS06025 PF02653 Branched-chain amino acid transport system / permease component CF57_RS06030 PF00107 Zinc-binding dehydrogenase CF57_RS06030 PF08240 Alcohol dehydrogenase GroES-like domain CF57_RS06035 PF01263 Aldose 1-epimerase CF57_RS06040 PF07681 DoxX CF57_RS06045 PF14759 Reductase C-terminal CF57_RS06045 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF57_RS06050 PF00106 short chain dehydrogenase CF57_RS06055 PF00355 Rieske [2Fe-2S] domain CF57_RS06060 PF00866 Ring hydroxylating beta subunit CF57_RS06065 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CF57_RS06065 PF00355 Rieske [2Fe-2S] domain CF57_RS06070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS06070 PF03466 LysR substrate binding domain CF57_RS06075 PF12832 MFS_1 like family CF57_RS06080 PF00874 PRD domain CF57_RS06085 PF12146 Serine aminopeptidase, S33 CF57_RS06090 PF00459 Inositol monophosphatase family CF57_RS06095 PF00588 SpoU rRNA Methylase family CF57_RS06100 PF02082 Transcriptional regulator CF57_RS06105 PF00266 Aminotransferase class-V CF57_RS06110 PF01592 NifU-like N terminal domain CF57_RS06115 PF01521 Iron-sulphur cluster biosynthesis CF57_RS06120 PF07743 HSCB C-terminal oligomerisation domain CF57_RS06125 PF00012 Hsp70 protein CF57_RS06130 PF00111 2Fe-2S iron-sulfur cluster binding domain CF57_RS06135 PF04384 Iron-sulphur cluster assembly CF57_RS06140 PF12404 Peptidase CF57_RS06140 PF00883 Cytosol aminopeptidase family, catalytic domain CF57_RS06145 PF14581 SseB protein C-terminal domain CF57_RS06145 PF07179 SseB protein N-terminal domain CF57_RS06150 PF00581 Rhodanese-like domain CF57_RS06155 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CF57_RS06155 PF17962 Bacterial macroglobulin domain 6 CF57_RS06155 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CF57_RS06155 PF01835 MG2 domain CF57_RS06155 PF07703 Alpha-2-macroglobulin bait region domain CF57_RS06155 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CF57_RS06155 PF07678 A-macroglobulin TED domain CF57_RS06155 PF00207 Alpha-2-macroglobulin family CF57_RS06155 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CF57_RS06160 PF00912 Transglycosylase CF57_RS06160 PF00905 Penicillin binding protein transpeptidase domain CF57_RS06160 PF06832 Penicillin-Binding Protein C-terminus Family CF57_RS06165 PF00334 Nucleoside diphosphate kinase CF57_RS06170 PF04055 Radical SAM superfamily CF57_RS06175 PF13464 Domain of unknown function (DUF4115) CF57_RS06180 PF04551 GcpE protein CF57_RS06185 PF03129 Anticodon binding domain CF57_RS06185 PF13393 Histidyl-tRNA synthetase CF57_RS06190 PF09976 Tetratricopeptide repeat-like domain CF57_RS06195 PF13360 PQQ-like domain CF57_RS06200 PF01926 50S ribosome-binding GTPase CF57_RS06200 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CF57_RS06205 PF07191 zinc-ribbons CF57_RS06210 PF02601 Exonuclease VII, large subunit CF57_RS06210 PF13742 OB-fold nucleic acid binding domain CF57_RS06215 PF00478 IMP dehydrogenase / GMP reductase domain CF57_RS06215 PF00571 CBS domain CF57_RS06220 PF02540 NAD synthase CF57_RS06220 PF00958 GMP synthase C terminal domain CF57_RS06220 PF00117 Glutamine amidotransferase class-I CF57_RS06225 PF17358 Family of unknown function (DUF5384) CF57_RS06230 PF05433 Glycine zipper 2TM domain CF57_RS06235 PF11119 Protein of unknown function (DUF2633) CF57_RS06245 PF00563 EAL domain CF57_RS06245 PF05231 MASE1 CF57_RS06250 PF02541 Ppx/GppA phosphatase family CF57_RS06255 PF02503 Polyphosphate kinase middle domain CF57_RS06255 PF13089 Polyphosphate kinase N-terminal domain CF57_RS06255 PF17941 Polyphosphate kinase C-terminal domain 1 CF57_RS06255 PF13090 Polyphosphate kinase C-terminal domain 2 CF57_RS06260 PF00551 Formyl transferase CF57_RS06265 PF00586 AIR synthase related protein, N-terminal domain CF57_RS06265 PF02769 AIR synthase related protein, C-terminal domain CF57_RS06275 PF00860 Permease family CF57_RS06280 PF00308 Bacterial dnaA protein CF57_RS06285 PF03960 ArsC family CF57_RS06290 PF01435 Peptidase family M48 CF57_RS06295 PF01594 AI-2E family transporter CF57_RS06300 PF01226 Formate/nitrite transporter CF57_RS06305 PF00158 Sigma-54 interaction domain CF57_RS06305 PF01590 GAF domain CF57_RS06310 PF07450 Formate hydrogenlyase maturation protein HycH CF57_RS06315 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CF57_RS06320 PF12838 4Fe-4S dicluster domain CF57_RS06325 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CF57_RS06325 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CF57_RS06325 PF00374 Nickel-dependent hydrogenase CF57_RS06330 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CF57_RS06330 PF00361 Proton-conducting membrane transporter CF57_RS06335 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CF57_RS06340 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CF57_RS06340 PF00361 Proton-conducting membrane transporter CF57_RS06345 PF00146 NADH dehydrogenase CF57_RS06350 PF00361 Proton-conducting membrane transporter CF57_RS06355 PF00361 Proton-conducting membrane transporter CF57_RS06360 PF12798 4Fe-4S binding domain CF57_RS06360 PF00037 4Fe-4S binding domain CF57_RS06365 PF00578 AhpC/TSA family CF57_RS06370 PF01842 ACT domain CF57_RS06375 PF00701 Dihydrodipicolinate synthetase family CF57_RS06380 PF06804 NlpB/DapX lipoprotein CF57_RS06390 PF01259 SAICAR synthetase CF57_RS06395 PF04228 Putative neutral zinc metallopeptidase CF57_RS06400 PF08351 Domain of unknown function (DUF1726) CF57_RS06400 PF17176 tRNA-binding domain CF57_RS06400 PF05127 Helicase CF57_RS06400 PF13718 GNAT acetyltransferase 2 CF57_RS06405 PF02230 Phospholipase/Carboxylesterase CF57_RS06410 PF13980 Uncharacterised protein family (UPF0370) CF57_RS06415 PF07687 Peptidase dimerisation domain CF57_RS06415 PF01546 Peptidase family M20/M25/M40 CF57_RS06420 PF03960 ArsC family CF57_RS06430 PF00873 AcrB/AcrD/AcrF family CF57_RS06435 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CF57_RS06435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS06435 PF07730 Histidine kinase CF57_RS06435 PF00672 HAMP domain CF57_RS06440 PF13247 4Fe-4S dicluster domain CF57_RS06440 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CF57_RS06440 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF57_RS06445 PF00293 NUDIX domain CF57_RS06450 PF06674 Protein of unknown function (DUF1176) CF57_RS06455 PF02779 Transketolase, pyrimidine binding domain CF57_RS06455 PF00456 Transketolase, thiamine diphosphate binding domain CF57_RS06455 PF02780 Transketolase, C-terminal domain CF57_RS06460 PF00923 Transaldolase/Fructose-6-phosphate aldolase CF57_RS06465 PF01515 Phosphate acetyl/butaryl transferase CF57_RS06465 PF03949 Malic enzyme, NAD binding domain CF57_RS06465 PF00390 Malic enzyme, N-terminal domain CF57_RS06470 PF00936 BMC domain CF57_RS06475 PF10662 Ethanolamine utilisation - propanediol utilisation CF57_RS06480 PF06249 Ethanolamine utilisation protein EutQ CF57_RS06485 PF01923 Cobalamin adenosyltransferase CF57_RS06490 PF01515 Phosphate acetyl/butaryl transferase CF57_RS06495 PF00936 BMC domain CF57_RS06500 PF03319 Ethanolamine utilisation protein EutN/carboxysome CF57_RS06505 PF00171 Aldehyde dehydrogenase family CF57_RS06515 PF00465 Iron-containing alcohol dehydrogenase CF57_RS06520 PF04346 Ethanolamine utilisation protein, EutH CF57_RS06525 PF06277 Ethanolamine utilisation protein EutA CF57_RS06530 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CF57_RS06535 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CF57_RS06540 PF00936 BMC domain CF57_RS06545 PF16365 Ethanolamine utilization protein EutK C-terminus CF57_RS06545 PF00936 BMC domain CF57_RS06550 PF12833 Helix-turn-helix domain CF57_RS06555 PF01218 Coproporphyrinogen III oxidase CF57_RS06560 PF01520 N-acetylmuramoyl-L-alanine amidase CF57_RS06565 PF00583 Acetyltransferase (GNAT) family CF57_RS06570 PF11143 Protein of unknown function (DUF2919) CF57_RS06575 PF06572 Protein of unknown function (DUF1131) CF57_RS06580 PF04261 Dyp-type peroxidase family CF57_RS06585 PF00144 Beta-lactamase CF57_RS06590 PF02378 Phosphotransferase system, EIIC CF57_RS06590 PF00367 phosphotransferase system, EIIB CF57_RS06595 PF01380 SIS domain CF57_RS06600 PF01380 SIS domain CF57_RS06600 PF01418 Helix-turn-helix domain, rpiR family CF57_RS06615 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS06620 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS06625 PF00005 ABC transporter CF57_RS06630 PF00291 Pyridoxal-phosphate dependent enzyme CF57_RS06635 PF05406 WGR domain CF57_RS06640 PF17263 Family of unknown function (DUF5329) CF57_RS06645 PF08543 Phosphomethylpyrimidine kinase CF57_RS06650 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CF57_RS06655 PF02896 PEP-utilising enzyme, TIM barrel domain CF57_RS06655 PF00391 PEP-utilising enzyme, mobile domain CF57_RS06655 PF05524 PEP-utilising enzyme, N-terminal CF57_RS06660 PF00381 PTS HPr component phosphorylation site CF57_RS06665 PF00291 Pyridoxal-phosphate dependent enzyme CF57_RS06675 PF04354 ZipA, C-terminal FtsZ-binding domain CF57_RS06680 PF12826 Helix-hairpin-helix motif CF57_RS06680 PF00533 BRCA1 C Terminus (BRCT) domain CF57_RS06680 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CF57_RS06680 PF03120 NAD-dependent DNA ligase OB-fold domain CF57_RS06680 PF01653 NAD-dependent DNA ligase adenylation domain CF57_RS06685 PF12843 Putative quorum-sensing-regulated virulence factor CF57_RS06690 PF13593 SBF-like CPA transporter family (DUF4137) CF57_RS06695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS06695 PF03466 LysR substrate binding domain CF57_RS06705 PF01048 Phosphorylase superfamily CF57_RS06710 PF03825 Nucleoside H+ symporter CF57_RS06720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS06720 PF03466 LysR substrate binding domain CF57_RS06745 PF00749 tRNA synthetases class I (E and Q), catalytic domain CF57_RS06750 PF07037 Putative transcription regulator (DUF1323) CF57_RS06755 PF07037 Putative transcription regulator (DUF1323) CF57_RS06770 PF05231 MASE1 CF57_RS06770 PF00563 EAL domain CF57_RS06775 PF07662 Na+ dependent nucleoside transporter C-terminus CF57_RS06775 PF01773 Na+ dependent nucleoside transporter N-terminus CF57_RS06775 PF07670 Nucleoside recognition CF57_RS06780 PF01566 Natural resistance-associated macrophage protein CF57_RS06790 PF10697 Protein of unknown function (DUF2502) CF57_RS06795 PF00654 Voltage gated chloride channel CF57_RS06800 PF02685 Glucokinase CF57_RS06805 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF57_RS06810 PF02378 Phosphotransferase system, EIIC CF57_RS06815 PF01321 Creatinase/Prolidase N-terminal domain CF57_RS06815 PF00557 Metallopeptidase family M24 CF57_RS06820 PF05343 M42 glutamyl aminopeptidase CF57_RS06825 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF57_RS06825 PF05524 PEP-utilising enzyme, N-terminal CF57_RS06825 PF00391 PEP-utilising enzyme, mobile domain CF57_RS06825 PF02896 PEP-utilising enzyme, TIM barrel domain CF57_RS06825 PF00381 PTS HPr component phosphorylation site CF57_RS06830 PF12833 Helix-turn-helix domain CF57_RS06835 PF00072 Response regulator receiver domain CF57_RS06835 PF04397 LytTr DNA-binding domain CF57_RS06840 PF06580 Histidine kinase CF57_RS06840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS06840 PF07694 5TMR of 5TMR-LYT CF57_RS06845 PF00155 Aminotransferase class I and II CF57_RS06850 PF03279 Bacterial lipid A biosynthesis acyltransferase CF57_RS06855 PF10810 Protein of unknown function (DUF2545) CF57_RS06870 PF10938 YfdX protein CF57_RS06875 PF02515 CoA-transferase family III CF57_RS06880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CF57_RS06880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CF57_RS06880 PF00205 Thiamine pyrophosphate enzyme, central domain CF57_RS06885 PF03547 Membrane transport protein CF57_RS06890 PF02515 CoA-transferase family III CF57_RS06895 PF00072 Response regulator receiver domain CF57_RS06895 PF00512 His Kinase A (phospho-acceptor) domain CF57_RS06895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS06895 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF57_RS06895 PF01627 Hpt domain CF57_RS06900 PF00072 Response regulator receiver domain CF57_RS06900 PF00196 Bacterial regulatory proteins, luxR family CF57_RS06905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF57_RS06905 PF00529 HlyD membrane-fusion protein of T1SS CF57_RS06910 PF07690 Major Facilitator Superfamily CF57_RS06915 PF00291 Pyridoxal-phosphate dependent enzyme CF57_RS06920 PF02447 GntP family permease CF57_RS06925 PF03466 LysR substrate binding domain CF57_RS06925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS07000 PF01381 Helix-turn-helix CF57_RS07000 PF00717 Peptidase S24-like CF57_RS07060 PF06440 DNA polymerase III, theta subunit CF57_RS07105 PF00959 Phage lysozyme CF57_RS07110 PF03245 Bacteriophage Rz lysis protein CF57_RS07125 PF17288 Terminase RNAseH like domain CF57_RS07125 PF04466 Phage terminase large subunit CF57_RS07130 PF06381 Protein of unknown function (DUF1073) CF57_RS07275 PF00717 Peptidase S24-like CF57_RS07285 PF13356 Arm DNA-binding domain CF57_RS07285 PF14659 Phage integrase, N-terminal SAM-like domain CF57_RS07285 PF00589 Phage integrase family CF57_RS07295 PF01226 Formate/nitrite transporter CF57_RS07300 PF04333 MlaA lipoprotein CF57_RS07310 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CF57_RS07315 PF04175 Protein of unknown function (DUF406) CF57_RS07320 PF00108 Thiolase, N-terminal domain CF57_RS07320 PF02803 Thiolase, C-terminal domain CF57_RS07325 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CF57_RS07325 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CF57_RS07325 PF00378 Enoyl-CoA hydratase/isomerase CF57_RS07330 PF00300 Histidine phosphatase superfamily (branch 1) CF57_RS07335 PF00419 Fimbrial protein CF57_RS07340 PF00577 Outer membrane usher protein CF57_RS07340 PF13954 PapC N-terminal domain CF57_RS07340 PF13953 PapC C-terminal domain CF57_RS07345 PF02753 Pili assembly chaperone PapD, C-terminal domain CF57_RS07345 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF57_RS07350 PF00419 Fimbrial protein CF57_RS07355 PF00419 Fimbrial protein CF57_RS07360 PF00419 Fimbrial protein CF57_RS07365 PF11245 Protein of unknown function (DUF2544) CF57_RS07370 PF01713 Smr domain CF57_RS07375 PF05175 Methyltransferase small domain CF57_RS07380 PF01264 Chorismate synthase CF57_RS07385 PF03411 Penicillin-insensitive murein endopeptidase CF57_RS07390 PF01925 Sulfite exporter TauE/SafE CF57_RS07395 PF04315 Elongation factor P hydroxylase CF57_RS07400 PF08891 YfcL protein CF57_RS07405 PF01266 FAD dependent oxidoreductase CF57_RS07405 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CF57_RS07410 PF00109 Beta-ketoacyl synthase, N-terminal domain CF57_RS07410 PF02801 Beta-ketoacyl synthase, C-terminal domain CF57_RS07415 PF07690 Major Facilitator Superfamily CF57_RS07425 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CF57_RS07425 PF11890 Domain of unknown function (DUF3410) CF57_RS07425 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CF57_RS07430 PF02774 Semialdehyde dehydrogenase, dimerisation domain CF57_RS07430 PF01118 Semialdehyde dehydrogenase, NAD binding domain CF57_RS07435 PF01416 tRNA pseudouridine synthase CF57_RS07440 PF09335 SNARE associated Golgi protein CF57_RS07445 PF01039 Carboxyl transferase domain CF57_RS07445 PF17848 Acetyl-coA carboxylase zinc finger domain CF57_RS07450 PF02875 Mur ligase family, glutamate ligase domain CF57_RS07450 PF08245 Mur ligase middle domain CF57_RS07455 PF05036 Sporulation related domain CF57_RS07460 PF02674 Colicin V production protein CF57_RS07465 PF00156 Phosphoribosyl transferase domain CF57_RS07470 PF02441 Flavoprotein CF57_RS07475 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF57_RS07480 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF57_RS07485 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS07490 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS07495 PF00005 ABC transporter CF57_RS07505 PF08338 Domain of unknown function (DUF1731) CF57_RS07505 PF01370 NAD dependent epimerase/dehydratase family CF57_RS07510 PF02152 Dihydroneopterin aldolase CF57_RS07515 PF00043 Glutathione S-transferase, C-terminal domain CF57_RS07515 PF02798 Glutathione S-transferase, N-terminal domain CF57_RS07520 PF14834 Glutathione S-transferase, C-terminal domain CF57_RS07520 PF02798 Glutathione S-transferase, N-terminal domain CF57_RS07525 PF12850 Calcineurin-like phosphoesterase superfamily domain CF57_RS07530 PF00293 NUDIX domain CF57_RS07535 PF03606 C4-dicarboxylate anaerobic carrier CF57_RS07540 PF01515 Phosphate acetyl/butaryl transferase CF57_RS07540 PF07085 DRTGG domain CF57_RS07545 PF00871 Acetokinase family CF57_RS07555 PF04217 Protein of unknown function, DUF412 CF57_RS07560 PF03887 YfbU domain CF57_RS07565 PF13419 Haloacid dehalogenase-like hydrolase CF57_RS07570 PF02080 TrkA-C domain CF57_RS07570 PF03600 Citrate transporter CF57_RS07580 PF00155 Aminotransferase class I and II CF57_RS07585 PF03466 LysR substrate binding domain CF57_RS07585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS07590 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CF57_RS07595 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CF57_RS07600 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CF57_RS07600 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CF57_RS07610 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CF57_RS07610 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CF57_RS07610 PF10531 SLBB domain CF57_RS07615 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF57_RS07615 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CF57_RS07615 PF01568 Molydopterin dinucleotide binding domain CF57_RS07615 PF00384 Molybdopterin oxidoreductase CF57_RS07620 PF00146 NADH dehydrogenase CF57_RS07625 PF12838 4Fe-4S dicluster domain CF57_RS07630 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CF57_RS07635 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CF57_RS07640 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CF57_RS07640 PF00361 Proton-conducting membrane transporter CF57_RS07645 PF00361 Proton-conducting membrane transporter CF57_RS07650 PF00361 Proton-conducting membrane transporter CF57_RS07655 PF08974 Domain of unknown function (DUF1877) CF57_RS07660 PF04389 Peptidase family M28 CF57_RS07665 PF02902 Ulp1 protease family, C-terminal catalytic domain CF57_RS07670 PF12706 Beta-lactamase superfamily domain CF57_RS07675 PF13673 Acetyltransferase (GNAT) domain CF57_RS07680 PF05957 Bacterial protein of unknown function (DUF883) CF57_RS07685 PF00425 chorismate binding enzyme CF57_RS07690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CF57_RS07690 PF16582 Middle domain of thiamine pyrophosphate CF57_RS07690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CF57_RS07695 PF12697 Alpha/beta hydrolase family CF57_RS07700 PF00378 Enoyl-CoA hydratase/isomerase CF57_RS07705 PF13378 Enolase C-terminal domain-like CF57_RS07710 PF13193 AMP-binding enzyme C-terminal domain CF57_RS07710 PF00501 AMP-binding enzyme CF57_RS07725 PF00892 EamA-like transporter family CF57_RS07730 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CF57_RS07735 PF01522 Polysaccharide deacetylase CF57_RS07740 PF01370 NAD dependent epimerase/dehydratase family CF57_RS07740 PF02911 Formyl transferase, C-terminal domain CF57_RS07740 PF00551 Formyl transferase CF57_RS07745 PF00535 Glycosyl transferase family 2 CF57_RS07750 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CF57_RS07755 PF00300 Histidine phosphatase superfamily (branch 1) CF57_RS07760 PF00293 NUDIX domain CF57_RS07765 PF07437 YfaZ precursor CF57_RS07770 PF00994 Probable molybdopterin binding domain CF57_RS07775 PF09339 IclR helix-turn-helix domain CF57_RS07775 PF01614 Bacterial transcriptional regulator CF57_RS07780 PF13378 Enolase C-terminal domain-like CF57_RS07780 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CF57_RS07790 PF03328 HpcH/HpaI aldolase/citrate lyase family CF57_RS07795 PF04754 Putative transposase, YhgA-like CF57_RS07800 PF02754 Cysteine-rich domain CF57_RS07800 PF13183 4Fe-4S dicluster domain CF57_RS07805 PF00890 FAD binding domain CF57_RS07810 PF04324 BFD-like [2Fe-2S] binding domain CF57_RS07810 PF01266 FAD dependent oxidoreductase CF57_RS07815 PF07690 Major Facilitator Superfamily CF57_RS07820 PF03009 Glycerophosphoryl diester phosphodiesterase family CF57_RS07835 PF00111 2Fe-2S iron-sulfur cluster binding domain CF57_RS07840 PF00268 Ribonucleotide reductase, small chain CF57_RS07845 PF03477 ATP cone domain CF57_RS07845 PF02867 Ribonucleotide reductase, barrel domain CF57_RS07845 PF00317 Ribonucleotide reductase, all-alpha domain CF57_RS07855 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat CF57_RS07855 PF12951 Passenger-associated-transport-repeat CF57_RS07855 PF03797 Autotransporter beta-domain CF57_RS07865 PF00521 DNA gyrase/topoisomerase IV, subunit A CF57_RS07865 PF03989 DNA gyrase C-terminal domain, beta-propeller CF57_RS07870 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) CF57_RS07875 PF06672 Protein of unknown function (DUF1175) CF57_RS07880 PF01835 MG2 domain CF57_RS07880 PF07703 Alpha-2-macroglobulin bait region domain CF57_RS07880 PF00207 Alpha-2-macroglobulin family CF57_RS07885 PF08486 Stage II sporulation protein CF57_RS07885 PF10062 Predicted secreted protein (DUF2300) CF57_RS07890 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) CF57_RS07895 PF09456 RcsC Alpha-Beta-Loop (ABL) CF57_RS07895 PF00072 Response regulator receiver domain CF57_RS07895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS07895 PF00512 His Kinase A (phospho-acceptor) domain CF57_RS07900 PF00072 Response regulator receiver domain CF57_RS07900 PF00196 Bacterial regulatory proteins, luxR family CF57_RS07905 PF16359 RcsD-ABL domain CF57_RS07905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS07905 PF01627 Hpt domain CF57_RS07920 PF00267 Gram-negative porin CF57_RS07925 PF02424 ApbE family CF57_RS07930 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CF57_RS07930 PF12833 Helix-turn-helix domain CF57_RS07930 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CF57_RS07930 PF02805 Metal binding domain of Ada CF57_RS07935 PF13532 2OG-Fe(II) oxygenase superfamily CF57_RS07940 PF00005 ABC transporter CF57_RS07945 PF06039 Malate:quinone oxidoreductase (Mqo) CF57_RS07950 PF03974 Ecotin CF57_RS07960 PF12800 4Fe-4S binding domain CF57_RS07960 PF00037 4Fe-4S binding domain CF57_RS07960 PF13187 4Fe-4S dicluster domain CF57_RS07965 PF03927 NapD protein CF57_RS07970 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF57_RS07970 PF00384 Molybdopterin oxidoreductase CF57_RS07970 PF01568 Molydopterin dinucleotide binding domain CF57_RS07975 PF12800 4Fe-4S binding domain CF57_RS07975 PF12838 4Fe-4S dicluster domain CF57_RS07980 PF13237 4Fe-4S dicluster domain CF57_RS07980 PF12801 4Fe-4S binding domain CF57_RS07985 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CF57_RS07990 PF03264 NapC/NirT cytochrome c family, N-terminal region CF57_RS07995 PF00005 ABC transporter CF57_RS08000 PF03379 CcmB protein CF57_RS08005 PF01578 Cytochrome C assembly protein CF57_RS08010 PF04995 Heme exporter protein D (CcmD) CF57_RS08015 PF03100 CcmE CF57_RS08020 PF01578 Cytochrome C assembly protein CF57_RS08020 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CF57_RS08025 PF08534 Redoxin CF57_RS08030 PF03918 Cytochrome C biogenesis protein CF57_RS08035 PF00196 Bacterial regulatory proteins, luxR family CF57_RS08035 PF00072 Response regulator receiver domain CF57_RS08055 PF00884 Sulfatase CF57_RS08055 PF11893 Domain of unknown function (DUF3413) CF57_RS08060 PF07208 Protein of unknown function (DUF1414) CF57_RS08065 PF04245 37-kD nucleoid-associated bacterial protein CF57_RS08070 PF01386 Ribosomal L25p family CF57_RS08075 PF00271 Helicase conserved C-terminal domain CF57_RS08075 PF04851 Type III restriction enzyme, res subunit CF57_RS08080 PF01479 S4 domain CF57_RS08080 PF00849 RNA pseudouridylate synthase CF57_RS08085 PF07690 Major Facilitator Superfamily CF57_RS08090 PF13989 YejG-like protein CF57_RS08095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF57_RS08095 PF00005 ABC transporter CF57_RS08100 PF12911 N-terminal TM domain of oligopeptide transport permease C CF57_RS08100 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS08105 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS08110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF57_RS08115 PF12792 CSS motif domain associated with EAL CF57_RS08115 PF00563 EAL domain CF57_RS08120 PF00877 NlpC/P60 family CF57_RS08125 PF01569 PAP2 superfamily CF57_RS08130 PF07683 Cobalamin synthesis protein cobW C-terminal domain CF57_RS08130 PF02492 CobW/HypB/UreG, nucleotide-binding domain CF57_RS08135 PF08125 Mannitol dehydrogenase C-terminal domain CF57_RS08135 PF01232 Mannitol dehydrogenase Rossmann domain CF57_RS08140 PF09285 Elongation factor P, C-terminal CF57_RS08140 PF08207 Elongation factor P (EF-P) KOW-like domain CF57_RS08140 PF01132 Elongation factor P (EF-P) OB domain CF57_RS08145 PF03692 Putative zinc- or iron-chelating domain CF57_RS08150 PF07690 Major Facilitator Superfamily CF57_RS08155 PF00381 PTS HPr component phosphorylation site CF57_RS08155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF57_RS08160 PF00294 pfkB family carbohydrate kinase CF57_RS08165 PF02378 Phosphotransferase system, EIIC CF57_RS08165 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF57_RS08170 PF00294 pfkB family carbohydrate kinase CF57_RS08175 PF04227 Indigoidine synthase A like protein CF57_RS08180 PF01773 Na+ dependent nucleoside transporter N-terminus CF57_RS08180 PF07662 Na+ dependent nucleoside transporter C-terminus CF57_RS08185 PF00027 Cyclic nucleotide-binding domain CF57_RS08190 PF01156 Inosine-uridine preferring nucleoside hydrolase CF57_RS08195 PF01773 Na+ dependent nucleoside transporter N-terminus CF57_RS08195 PF07662 Na+ dependent nucleoside transporter C-terminus CF57_RS08200 PF00294 pfkB family carbohydrate kinase CF57_RS08205 PF01261 Xylose isomerase-like TIM barrel CF57_RS08210 PF03601 Conserved hypothetical protein 698 CF57_RS08215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS08215 PF03466 LysR substrate binding domain CF57_RS08220 PF00324 Amino acid permease CF57_RS08225 PF07715 TonB-dependent Receptor Plug Domain CF57_RS08225 PF00593 TonB dependent receptor CF57_RS08230 PF00756 Putative esterase CF57_RS08240 PF01227 GTP cyclohydrolase I CF57_RS08245 PF04235 Protein of unknown function (DUF418) CF57_RS08255 PF00356 Bacterial regulatory proteins, lacI family CF57_RS08260 PF13407 Periplasmic binding protein domain CF57_RS08265 PF00005 ABC transporter CF57_RS08270 PF02653 Branched-chain amino acid transport system / permease component CF57_RS08275 PF01180 Dihydroorotate dehydrogenase CF57_RS08280 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF57_RS08280 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CF57_RS08285 PF10808 Protein of unknown function (DUF2542) CF57_RS08290 PF02698 DUF218 domain CF57_RS08295 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CF57_RS08295 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CF57_RS08300 PF04172 LrgB-like family CF57_RS08305 PF03788 LrgA family CF57_RS08310 PF01207 Dihydrouridine synthase (Dus) CF57_RS08320 PF02321 Outer membrane efflux protein CF57_RS08330 PF09335 SNARE associated Golgi protein CF57_RS08335 PF04893 Yip1 domain CF57_RS08340 PF00768 D-alanyl-D-alanine carboxypeptidase CF57_RS08345 PF01565 FAD binding domain CF57_RS08345 PF09330 D-lactate dehydrogenase, membrane binding CF57_RS08350 PF14310 Fibronectin type III-like domain CF57_RS08350 PF00933 Glycosyl hydrolase family 3 N terminal domain CF57_RS08350 PF01915 Glycosyl hydrolase family 3 C-terminal domain CF57_RS08355 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CF57_RS08360 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS08365 PF00005 ABC transporter CF57_RS08370 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS08380 PF13411 MerR HTH family regulatory protein CF57_RS08385 PF06580 Histidine kinase CF57_RS08385 PF07694 5TMR of 5TMR-LYT CF57_RS08390 PF00072 Response regulator receiver domain CF57_RS08390 PF04397 LytTr DNA-binding domain CF57_RS08395 PF07308 Protein of unknown function (DUF1456) CF57_RS08400 PF06998 Protein of unknown function (DUF1307) CF57_RS08405 PF04434 SWIM zinc finger CF57_RS08410 PF05762 VWA domain containing CoxE-like protein CF57_RS08420 PF07728 AAA domain (dynein-related subfamily) CF57_RS08430 PF13569 Domain of unknown function (DUF4132) CF57_RS08435 PF13569 Domain of unknown function (DUF4132) CF57_RS08440 PF01588 Putative tRNA binding domain CF57_RS08440 PF09334 tRNA synthetases class I (M) CF57_RS08445 PF10609 NUBPL iron-transfer P-loop NTPase CF57_RS08450 PF10836 Protein of unknown function (DUF2574) CF57_RS08460 PF00419 Fimbrial protein CF57_RS08465 PF03400 IS1 transposase CF57_RS08470 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF57_RS08470 PF02753 Pili assembly chaperone PapD, C-terminal domain CF57_RS08475 PF13953 PapC C-terminal domain CF57_RS08475 PF00577 Outer membrane usher protein CF57_RS08475 PF13954 PapC N-terminal domain CF57_RS08480 PF00419 Fimbrial protein CF57_RS08485 PF11776 Nickel/cobalt transporter regulator CF57_RS08490 PF03824 High-affinity nickel-transport protein CF57_RS08495 PF02583 Metal-sensitive transcriptional repressor CF57_RS08500 PF02110 Hydroxyethylthiazole kinase family CF57_RS08505 PF08543 Phosphomethylpyrimidine kinase CF57_RS08510 PF01183 Glycosyl hydrolases family 25 CF57_RS08515 PF07702 UTRA domain CF57_RS08515 PF00392 Bacterial regulatory proteins, gntR family CF57_RS08520 PF00294 pfkB family carbohydrate kinase CF57_RS08525 PF03747 ADP-ribosylglycohydrolase CF57_RS08530 PF03825 Nucleoside H+ symporter CF57_RS08535 PF01791 DeoC/LacD family aldolase CF57_RS08540 PF01116 Fructose-bisphosphate aldolase class-II CF57_RS08550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF57_RS08555 PF03400 IS1 transposase CF57_RS08560 PF03611 PTS system sugar-specific permease component CF57_RS08565 PF00107 Zinc-binding dehydrogenase CF57_RS08565 PF08240 Alcohol dehydrogenase GroES-like domain CF57_RS08570 PF03400 IS1 transposase CF57_RS08575 PF00107 Zinc-binding dehydrogenase CF57_RS08575 PF08240 Alcohol dehydrogenase GroES-like domain CF57_RS08580 PF08220 DeoR-like helix-turn-helix domain CF57_RS08585 PF00781 Diacylglycerol kinase catalytic domain CF57_RS08600 PF16325 Peptidase family U32 C-terminal domain CF57_RS08600 PF01136 Peptidase family U32 CF57_RS08610 PF07411 Domain of unknown function (DUF1508) CF57_RS08615 PF00072 Response regulator receiver domain CF57_RS08615 PF00486 Transcriptional regulatory protein, C terminal CF57_RS08620 PF00672 HAMP domain CF57_RS08620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS08620 PF00512 His Kinase A (phospho-acceptor) domain CF57_RS08625 PF07690 Major Facilitator Superfamily CF57_RS08630 PF00873 AcrB/AcrD/AcrF family CF57_RS08635 PF00873 AcrB/AcrD/AcrF family CF57_RS08640 PF13533 Biotin-lipoyl like CF57_RS08645 PF00092 von Willebrand factor type A domain CF57_RS08660 PF00012 Hsp70 protein CF57_RS08665 PF00730 HhH-GPD superfamily base excision DNA repair protein CF57_RS08665 PF06029 AlkA N-terminal domain CF57_RS08670 PF13426 PAS domain CF57_RS08670 PF08447 PAS fold CF57_RS08670 PF00563 EAL domain CF57_RS08670 PF00990 Diguanylate cyclase, GGDEF domain CF57_RS08670 PF05231 MASE1 CF57_RS08670 PF08448 PAS fold CF57_RS08675 PF00485 Phosphoribulokinase / Uridine kinase family CF57_RS08680 PF00692 dUTPase CF57_RS08685 PF05170 AsmA family CF57_RS08700 PF03741 Integral membrane protein TerC family CF57_RS08700 PF03471 Transporter associated domain CF57_RS08700 PF00571 CBS domain CF57_RS08705 PF00483 Nucleotidyl transferase CF57_RS08710 PF01569 PAP2 superfamily CF57_RS08715 PF14052 Capsule assembly protein Wzi CF57_RS08720 PF02563 Polysaccharide biosynthesis/export protein CF57_RS08720 PF10531 SLBB domain CF57_RS08720 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CF57_RS08725 PF01451 Low molecular weight phosphotyrosine protein phosphatase CF57_RS08730 PF13614 AAA domain CF57_RS08730 PF02706 Chain length determinant protein CF57_RS08730 PF13807 G-rich domain on putative tyrosine kinase CF57_RS08740 PF02397 Bacterial sugar transferase CF57_RS08745 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CF57_RS08745 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CF57_RS08750 PF03400 IS1 transposase CF57_RS08760 PF01050 Mannose-6-phosphate isomerase CF57_RS08760 PF00483 Nucleotidyl transferase CF57_RS08765 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CF57_RS08765 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CF57_RS08765 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CF57_RS08765 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CF57_RS08775 PF00005 ABC transporter CF57_RS08780 PF13847 Methyltransferase domain CF57_RS08780 PF00069 Protein kinase domain CF57_RS08785 PF00534 Glycosyl transferases group 1 CF57_RS08785 PF13439 Glycosyltransferase Family 4 CF57_RS08790 PF00534 Glycosyl transferases group 1 CF57_RS08790 PF00862 Sucrose synthase CF57_RS08800 PF01502 Phosphoribosyl-AMP cyclohydrolase CF57_RS08800 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CF57_RS08805 PF00977 Histidine biosynthesis protein CF57_RS08810 PF00977 Histidine biosynthesis protein CF57_RS08815 PF00117 Glutamine amidotransferase class-I CF57_RS08820 PF00475 Imidazoleglycerol-phosphate dehydratase CF57_RS08820 PF08645 Polynucleotide kinase 3 phosphatase CF57_RS08825 PF00155 Aminotransferase class I and II CF57_RS08830 PF00815 Histidinol dehydrogenase CF57_RS08835 PF01634 ATP phosphoribosyltransferase CF57_RS08835 PF08029 HisG, C-terminal domain CF57_RS08840 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CF57_RS08845 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system CF57_RS08850 PF01370 NAD dependent epimerase/dehydratase family CF57_RS08855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS08855 PF03466 LysR substrate binding domain CF57_RS08860 PF13520 Amino acid permease CF57_RS08865 PF04143 Sulphur transport CF57_RS08870 PF01206 Sulfurtransferase TusA CF57_RS08875 PF08411 Exonuclease C-terminal CF57_RS08875 PF00929 Exonuclease CF57_RS08880 PF07943 Penicillin-binding protein 5, C-terminal domain CF57_RS08880 PF00768 D-alanyl-D-alanine carboxypeptidase CF57_RS08885 PF06445 GyrI-like small molecule binding domain CF57_RS08890 PF04632 Fusaric acid resistance protein family CF57_RS08895 PF04363 Protein of unknown function (DUF496) CF57_RS08900 PF10662 Ethanolamine utilisation - propanediol utilisation CF57_RS08905 PF01548 Transposase CF57_RS08905 PF02371 Transposase IS116/IS110/IS902 family CF57_RS08925 PF05321 Haemolysin expression modulating protein CF57_RS08935 PF13276 HTH-like domain CF57_RS08935 PF00665 Integrase core domain CF57_RS08940 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CF57_RS08945 PF02654 Cobalamin-5-phosphate synthase CF57_RS08950 PF02277 Phosphoribosyltransferase CF57_RS08955 PF17969 L,D-transpeptidase C-terminal domain CF57_RS08955 PF03734 L,D-transpeptidase catalytic domain CF57_RS08965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS08965 PF03466 LysR substrate binding domain CF57_RS08970 PF03466 LysR substrate binding domain CF57_RS08970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS08990 PF03400 IS1 transposase CF57_RS08995 PF01709 Transcriptional regulator CF57_RS09000 PF01048 Phosphorylase superfamily CF57_RS09000 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CF57_RS09005 PF07690 Major Facilitator Superfamily CF57_RS09005 PF00083 Sugar (and other) transporter CF57_RS09015 PF11924 Inverse autotransporter, beta-domain CF57_RS09015 PF02369 Bacterial Ig-like domain (group 1) CF57_RS09015 PF09134 Invasin, domain 3 CF57_RS09025 PF06167 Glucose-regulated metallo-peptidase M90 CF57_RS09040 PF01292 Prokaryotic cytochrome b561 CF57_RS09045 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CF57_RS09050 PF01794 Ferric reductase like transmembrane component CF57_RS09055 PF00174 Oxidoreductase molybdopterin binding domain CF57_RS09060 PF00576 HIUase/Transthyretin family CF57_RS09065 PF00486 Transcriptional regulatory protein, C terminal CF57_RS09065 PF00072 Response regulator receiver domain CF57_RS09070 PF00512 His Kinase A (phospho-acceptor) domain CF57_RS09070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS09085 PF00267 Gram-negative porin CF57_RS09100 PF01966 HD domain CF57_RS09105 PF00145 C-5 cytosine-specific DNA methylase CF57_RS09105 PF18284 DNA methylase N-terminal domain CF57_RS09110 PF03852 DNA mismatch endonuclease Vsr CF57_RS09115 PF00892 EamA-like transporter family CF57_RS09120 PF05661 Protein of unknown function (DUF808) CF57_RS09125 PF09926 Uncharacterized small protein (DUF2158) CF57_RS09140 PF10733 Protein of unknown function (DUF2525) CF57_RS09145 PF10781 Dextransucrase DSRB CF57_RS09155 PF03400 IS1 transposase CF57_RS09160 PF02049 Flagellar hook-basal body complex protein FliE CF57_RS09170 PF00893 Small Multidrug Resistance protein CF57_RS09175 PF01161 Phosphatidylethanolamine-binding protein CF57_RS09180 PF12833 Helix-turn-helix domain CF57_RS09190 PF01797 Transposase IS200 like CF57_RS09195 PF07282 Putative transposase DNA-binding domain CF57_RS09195 PF01385 Probable transposase CF57_RS09195 PF12323 Helix-turn-helix domain CF57_RS09200 PF02586 SOS response associated peptidase (SRAP) CF57_RS09205 PF01206 Sulfurtransferase TusA CF57_RS09210 PF04143 Sulphur transport CF57_RS09215 PF13987 YedD-like protein CF57_RS09220 PF00128 Alpha amylase, catalytic domain CF57_RS09220 PF02806 Alpha amylase, C-terminal all-beta domain CF57_RS09225 PF05400 Flagellar protein FliT CF57_RS09230 PF02561 Flagellar protein FliS CF57_RS09235 PF02465 Flagellar hook-associated protein 2 N-terminus CF57_RS09235 PF07195 Flagellar hook-associated protein 2 C-terminus CF57_RS09240 PF12445 Flagellin protein CF57_RS09240 PF00669 Bacterial flagellin N-terminal helical region CF57_RS09240 PF00700 Bacterial flagellin C-terminal helical region CF57_RS09245 PF04539 Sigma-70 region 3 CF57_RS09245 PF04545 Sigma-70, region 4 CF57_RS09245 PF04542 Sigma-70 region 2 CF57_RS09250 PF02899 Phage integrase, N-terminal SAM-like domain CF57_RS09255 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF57_RS09260 PF00291 Pyridoxal-phosphate dependent enzyme CF57_RS09265 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS09270 PF00005 ABC transporter CF57_RS09275 PF00196 Bacterial regulatory proteins, luxR family CF57_RS09275 PF03472 Autoinducer binding domain CF57_RS09280 PF10769 Protein of unknown function (DUF2594) CF57_RS09290 PF00196 Bacterial regulatory proteins, luxR family CF57_RS09290 PF00072 Response regulator receiver domain CF57_RS09295 PF01541 GIY-YIG catalytic domain CF57_RS09295 PF02151 UvrB/uvrC motif CF57_RS09295 PF08459 UvrC Helix-hairpin-helix N-terminal CF57_RS09300 PF01066 CDP-alcohol phosphatidyltransferase CF57_RS09320 PF02810 SEC-C motif CF57_RS09320 PF03695 Uncharacterised protein family (UPF0149) CF57_RS09325 PF03222 Tryptophan/tyrosine permease family CF57_RS09330 PF10678 Protein of unknown function (DUF2492) CF57_RS09335 PF00210 Ferritin-like domain CF57_RS09340 PF13992 YecR-like lipoprotein CF57_RS09350 PF10964 Protein of unknown function (DUF2766) CF57_RS09355 PF00210 Ferritin-like domain CF57_RS09360 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CF57_RS09365 PF00005 ABC transporter CF57_RS09370 PF02653 Branched-chain amino acid transport system / permease component CF57_RS09375 PF02358 Trehalose-phosphatase CF57_RS09380 PF00982 Glycosyltransferase family 20 CF57_RS09385 PF00582 Universal stress protein family CF57_RS09390 PF05247 Flagellar transcriptional activator (FlhD) CF57_RS09395 PF05280 Flagellar transcriptional activator (FlhC) CF57_RS09400 PF01618 MotA/TolQ/ExbB proton channel family CF57_RS09405 PF13677 Membrane MotB of proton-channel complex MotA/MotB CF57_RS09405 PF00691 OmpA family CF57_RS09410 PF09078 CheY binding CF57_RS09410 PF02895 Signal transducing histidine kinase, homodimeric domain CF57_RS09410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS09410 PF01584 CheW-like domain CF57_RS09410 PF01627 Hpt domain CF57_RS09420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CF57_RS09420 PF00672 HAMP domain CF57_RS09420 PF02203 Tar ligand binding domain homologue CF57_RS09430 PF01739 CheR methyltransferase, SAM binding domain CF57_RS09430 PF03705 CheR methyltransferase, all-alpha domain CF57_RS09435 PF00072 Response regulator receiver domain CF57_RS09435 PF01339 CheB methylesterase CF57_RS09440 PF00072 Response regulator receiver domain CF57_RS09445 PF04344 Chemotaxis phosphatase, CheZ CF57_RS09455 PF00771 FHIPEP family CF57_RS09460 PF06366 Flagellar protein FlhE CF57_RS09465 PF07007 Lysozyme inhibitor LprI CF57_RS09470 PF00750 tRNA synthetases class I (R) CF57_RS09470 PF03485 Arginyl tRNA synthetase N terminal domain CF57_RS09470 PF05746 DALR anticodon binding domain CF57_RS09475 PF06185 YecM protein CF57_RS09480 PF03932 CutC family CF57_RS09485 PF03264 NapC/NirT cytochrome c family, N-terminal region CF57_RS09490 PF00384 Molybdopterin oxidoreductase CF57_RS09490 PF18364 Molybdopterin oxidoreductase N-terminal domain CF57_RS09490 PF01568 Molydopterin dinucleotide binding domain CF57_RS09495 PF08003 Protein of unknown function (DUF1698) CF57_RS09500 PF13649 Methyltransferase domain CF57_RS09505 PF01124 MAPEG family CF57_RS09510 PF01904 Protein of unknown function DUF72 CF57_RS09540 PF06440 DNA polymerase III, theta subunit CF57_RS09585 PF00717 Peptidase S24-like CF57_RS09590 PF00857 Isochorismatase family CF57_RS09595 PF00152 tRNA synthetases class II (D, K and N) CF57_RS09595 PF01336 OB-fold nucleic acid binding domain CF57_RS09595 PF02938 GAD domain CF57_RS09600 PF00293 NUDIX domain CF57_RS09605 PF01709 Transcriptional regulator CF57_RS09610 PF02075 Crossover junction endodeoxyribonuclease RuvC CF57_RS09615 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CF57_RS09620 PF01330 RuvA N terminal domain CF57_RS09620 PF07499 RuvA, C-terminal domain CF57_RS09625 PF05491 RuvB C-terminal winged helix domain CF57_RS09625 PF05496 Holliday junction DNA helicase RuvB P-loop domain CF57_RS09625 PF17864 RuvB AAA lid domain CF57_RS09630 PF00950 ABC 3 transport family CF57_RS09635 PF00005 ABC transporter CF57_RS09640 PF01297 Zinc-uptake complex component A periplasmic CF57_RS09645 PF01476 LysM domain CF57_RS09645 PF08525 Opacity-associated protein A N-terminal motif CF57_RS09645 PF01551 Peptidase family M23 CF57_RS09650 PF03279 Bacterial lipid A biosynthesis acyltransferase CF57_RS09655 PF02887 Pyruvate kinase, alpha/beta domain CF57_RS09655 PF00224 Pyruvate kinase, barrel domain CF57_RS09660 PF01380 SIS domain CF57_RS09660 PF01418 Helix-turn-helix domain, rpiR family CF57_RS09670 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CF57_RS09670 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CF57_RS09675 PF00920 Dehydratase family CF57_RS09680 PF01081 KDPG and KHG aldolase CF57_RS09685 PF02222 ATP-grasp domain CF57_RS09690 PF07130 YebG protein CF57_RS09695 PF13995 YebF-like protein CF57_RS09705 PF04391 Protein of unknown function (DUF533) CF57_RS09710 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CF57_RS09710 PF00326 Prolyl oligopeptidase family CF57_RS09715 PF00929 Exonuclease CF57_RS09720 PF00795 Carbon-nitrogen hydrolase CF57_RS09725 PF06440 DNA polymerase III, theta subunit CF57_RS09730 PF04234 CopC domain CF57_RS09735 PF05425 Copper resistance protein D CF57_RS09740 PF10709 Protein of unknown function (DUF2511) CF57_RS09750 PF00149 Calcineurin-like phosphoesterase CF57_RS09755 PF07358 Protein of unknown function (DUF1482) CF57_RS09760 PF07351 Protein of unknown function (DUF1480) CF57_RS09765 PF01189 16S rRNA methyltransferase RsmB/F CF57_RS09765 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CF57_RS09765 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CF57_RS09770 PF02470 MlaD protein CF57_RS09775 PF04403 Paraquat-inducible protein A CF57_RS09780 PF13185 GAF domain CF57_RS09785 PF04352 ProQ/FINO family CF57_RS09785 PF17516 ProQ C-terminal domain CF57_RS09790 PF03572 Peptidase family S41 CF57_RS09790 PF11818 C-terminal domain of tail specific protease (DUF3340) CF57_RS09790 PF00595 PDZ domain CF57_RS09790 PF17804 Tail specific protease N-terminal domain CF57_RS09795 PF01435 Peptidase family M48 CF57_RS09800 PF07690 Major Facilitator Superfamily CF57_RS09805 PF09339 IclR helix-turn-helix domain CF57_RS09805 PF01614 Bacterial transcriptional regulator CF57_RS09810 PF13996 YobH-like protein CF57_RS09815 PF13998 MgrB protein CF57_RS09820 PF13974 YebO-like protein CF57_RS09830 PF10736 Protein of unknown function (DUF2627) CF57_RS09835 PF00313 'Cold-shock' DNA-binding domain CF57_RS09840 PF13847 Methyltransferase domain CF57_RS09845 PF02659 Putative manganese efflux pump CF57_RS09855 PF06173 Protein of unknown function (DUF986) CF57_RS09860 PF03613 PTS system mannose/fructose/sorbose family IID component CF57_RS09865 PF03609 PTS system sorbose-specific iic component CF57_RS09870 PF03830 PTS system sorbose subfamily IIB component CF57_RS09870 PF03610 PTS system fructose IIA component CF57_RS09880 PF03741 Integral membrane protein TerC family CF57_RS09880 PF03471 Transporter associated domain CF57_RS09885 PF00563 EAL domain CF57_RS09885 PF12792 CSS motif domain associated with EAL CF57_RS09890 PF03313 Serine dehydratase alpha chain CF57_RS09890 PF03315 Serine dehydratase beta chain CF57_RS09895 PF00293 NUDIX domain CF57_RS09900 PF04715 Anthranilate synthase component I, N terminal region CF57_RS09900 PF00425 chorismate binding enzyme CF57_RS09905 PF03701 Uncharacterised protein family (UPF0181) CF57_RS09910 PF08986 Domain of unknown function (DUF1889) CF57_RS09920 PF01042 Endoribonuclease L-PSP CF57_RS09925 PF04851 Type III restriction enzyme, res subunit CF57_RS09925 PF13307 Helicase C-terminal domain CF57_RS09930 PF00814 Glycoprotease family CF57_RS09935 PF03843 Outer membrane lipoprotein Slp family CF57_RS09940 PF00501 AMP-binding enzyme CF57_RS09940 PF13193 AMP-binding enzyme C-terminal domain CF57_RS09945 PF01612 3'-5' exonuclease CF57_RS09945 PF00570 HRDC domain CF57_RS09950 PF00175 Oxidoreductase NAD-binding domain CF57_RS09950 PF00111 2Fe-2S iron-sulfur cluster binding domain CF57_RS09950 PF00970 Oxidoreductase FAD-binding domain CF57_RS09955 PF00355 Rieske [2Fe-2S] domain CF57_RS09955 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CF57_RS09960 PF02028 BCCT, betaine/carnitine/choline family transporter CF57_RS09965 PF00180 Isocitrate/isopropylmalate dehydrogenase CF57_RS09970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS09970 PF03466 LysR substrate binding domain CF57_RS09975 PF01810 LysE type translocator CF57_RS09980 PF09313 Domain of unknown function (DUF1971) CF57_RS09985 PF08956 Domain of unknown function (DUF1869) CF57_RS09990 PF04226 Transglycosylase associated protein CF57_RS10000 PF13185 GAF domain CF57_RS10000 PF00990 Diguanylate cyclase, GGDEF domain CF57_RS10005 PF03891 Domain of unknown function (DUF333) CF57_RS10010 PF04343 Protein of unknown function, DUF488 CF57_RS10015 PF07690 Major Facilitator Superfamily CF57_RS10020 PF12833 Helix-turn-helix domain CF57_RS10020 PF02311 AraC-like ligand binding domain CF57_RS10025 PF04284 Protein of unknown function (DUF441) CF57_RS10035 PF04073 Aminoacyl-tRNA editing domain CF57_RS10040 PF17155 Gammaproteobacterial periplasmic sensor domain CF57_RS10040 PF00990 Diguanylate cyclase, GGDEF domain CF57_RS10045 PF00990 Diguanylate cyclase, GGDEF domain CF57_RS10045 PF17158 Membrane-associated sensor, integral membrane domain CF57_RS10050 PF04285 Protein of unknown function (DUF444) CF57_RS10055 PF08298 PrkA AAA domain CF57_RS10055 PF06798 PrkA serine protein kinase C-terminal domain CF57_RS10060 PF06629 MltA-interacting protein MipA CF57_RS10065 PF00248 Aldo/keto reductase family CF57_RS10070 PF01263 Aldose 1-epimerase CF57_RS10075 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CF57_RS10075 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CF57_RS10080 PF01641 SelR domain CF57_RS10085 PF07023 Protein of unknown function (DUF1315) CF57_RS10090 PF08240 Alcohol dehydrogenase GroES-like domain CF57_RS10090 PF00107 Zinc-binding dehydrogenase CF57_RS10095 PF00083 Sugar (and other) transporter CF57_RS10100 PF03400 IS1 transposase CF57_RS10105 PF00248 Aldo/keto reductase family CF57_RS10110 PF00455 DeoR C terminal sensor domain CF57_RS10110 PF08220 DeoR-like helix-turn-helix domain CF57_RS10115 PF00083 Sugar (and other) transporter CF57_RS10120 PF00857 Isochorismatase family CF57_RS10125 PF17763 Glutaminase/Asparaginase C-terminal domain CF57_RS10125 PF00710 Asparaginase, N-terminal CF57_RS10130 PF01343 Peptidase family S49 CF57_RS10140 PF00881 Nitroreductase family CF57_RS10150 PF00586 AIR synthase related protein, N-terminal domain CF57_RS10150 PF02769 AIR synthase related protein, C-terminal domain CF57_RS10155 PF01131 DNA topoisomerase CF57_RS10155 PF01751 Toprim domain CF57_RS10160 PF00012 Hsp70 protein CF57_RS10165 PF00226 DnaJ domain CF57_RS10165 PF01556 DnaJ C terminal domain CF57_RS10165 PF00684 DnaJ central domain CF57_RS10170 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CF57_RS10170 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CF57_RS10175 PF07383 Protein of unknown function (DUF1496) CF57_RS10180 PF00293 NUDIX domain CF57_RS10185 PF01066 CDP-alcohol phosphatidyltransferase CF57_RS10190 PF00581 Rhodanese-like domain CF57_RS10195 PF00005 ABC transporter CF57_RS10200 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS10205 PF13416 Bacterial extracellular solute-binding protein CF57_RS10210 PF02627 Carboxymuconolactone decarboxylase family CF57_RS10215 PF09335 SNARE associated Golgi protein CF57_RS10225 PF09335 SNARE associated Golgi protein CF57_RS10230 PF03372 Endonuclease/Exonuclease/phosphatase family CF57_RS10235 PF00202 Aminotransferase class-III CF57_RS10240 PF04958 Arginine N-succinyltransferase beta subunit CF57_RS10245 PF00171 Aldehyde dehydrogenase family CF57_RS10250 PF04996 Succinylarginine dihydrolase CF57_RS10255 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CF57_RS10260 PF07813 LTXXQ motif family protein CF57_RS10265 PF05962 HutD CF57_RS10280 PF02540 NAD synthase CF57_RS10285 PF04355 SmpA / OmlA family CF57_RS10290 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF57_RS10295 PF02378 Phosphotransferase system, EIIC CF57_RS10300 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CF57_RS10305 PF12833 Helix-turn-helix domain CF57_RS10305 PF07883 Cupin domain CF57_RS10310 PF11975 Family 4 glycosyl hydrolase C-terminal domain CF57_RS10310 PF02056 Family 4 glycosyl hydrolase CF57_RS10315 PF04794 YdjC-like protein CF57_RS10320 PF00199 Catalase CF57_RS10320 PF18011 C-terminal domain found in long catalases CF57_RS10320 PF06628 Catalase-related immune-responsive CF57_RS10325 PF10729 Cell division activator CedA CF57_RS10335 PF03811 InsA N-terminal domain CF57_RS10335 PF12759 InsA C-terminal domain CF57_RS10345 PF00375 Sodium:dicarboxylate symporter family CF57_RS10350 PF04307 LexA-binding, inner membrane-associated putative hydrolase CF57_RS10355 PF13419 Haloacid dehalogenase-like hydrolase CF57_RS10360 PF14002 YniB-like protein CF57_RS10365 PF03881 Fructosamine kinase CF57_RS10370 PF11080 Endoribonuclease GhoS CF57_RS10375 PF00294 pfkB family carbohydrate kinase CF57_RS10380 PF04338 Protein of unknown function, DUF481 CF57_RS10390 PF07906 ShET2 enterotoxin, N-terminal region CF57_RS10395 PF03400 IS1 transposase CF57_RS10405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CF57_RS10405 PF03129 Anticodon binding domain CF57_RS10405 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CF57_RS10405 PF02824 TGS domain CF57_RS10410 PF05198 Translation initiation factor IF-3, N-terminal domain CF57_RS10410 PF00707 Translation initiation factor IF-3, C-terminal domain CF57_RS10415 PF01632 Ribosomal protein L35 CF57_RS10420 PF00453 Ribosomal protein L20 CF57_RS10430 PF01409 tRNA synthetases class II core domain (F) CF57_RS10430 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CF57_RS10435 PF03483 B3/4 domain CF57_RS10435 PF03484 tRNA synthetase B5 domain CF57_RS10435 PF03147 Ferredoxin-fold anticodon binding domain CF57_RS10435 PF01588 Putative tRNA binding domain CF57_RS10435 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CF57_RS10440 PF00216 Bacterial DNA-binding protein CF57_RS10445 PF01032 FecCD transport family CF57_RS10450 PF00255 Glutathione peroxidase CF57_RS10455 PF00005 ABC transporter CF57_RS10460 PF00877 NlpC/P60 family CF57_RS10465 PF00563 EAL domain CF57_RS10470 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CF57_RS10475 PF10636 Hemin uptake protein hemP CF57_RS10480 PF00793 DAHP synthetase I family CF57_RS10485 PF03618 Kinase/pyrophosphorylase CF57_RS10495 PF00391 PEP-utilising enzyme, mobile domain CF57_RS10495 PF02896 PEP-utilising enzyme, TIM barrel domain CF57_RS10495 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CF57_RS10500 PF13193 AMP-binding enzyme C-terminal domain CF57_RS10500 PF00501 AMP-binding enzyme CF57_RS10510 PF01494 FAD binding domain CF57_RS10515 PF00766 Electron transfer flavoprotein FAD-binding domain CF57_RS10515 PF01012 Electron transfer flavoprotein domain CF57_RS10520 PF01012 Electron transfer flavoprotein domain CF57_RS10530 PF02311 AraC-like ligand binding domain CF57_RS10530 PF12833 Helix-turn-helix domain CF57_RS10535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CF57_RS10535 PF02770 Acyl-CoA dehydrogenase, middle domain CF57_RS10535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CF57_RS10540 PF01144 Coenzyme A transferase CF57_RS10545 PF01487 Type I 3-dehydroquinase CF57_RS10550 PF08501 Shikimate dehydrogenase substrate binding domain CF57_RS10550 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CF57_RS10555 PF07690 Major Facilitator Superfamily CF57_RS10560 PF07690 Major Facilitator Superfamily CF57_RS10565 PF08965 Domain of unknown function (DUF1870) CF57_RS10570 PF01594 AI-2E family transporter CF57_RS10575 PF02913 FAD linked oxidases, C-terminal domain CF57_RS10575 PF01565 FAD binding domain CF57_RS10575 PF13183 4Fe-4S dicluster domain CF57_RS10580 PF03061 Thioesterase superfamily CF57_RS10585 PF15930 Domain of unknown function CF57_RS10590 PF01521 Iron-sulphur cluster biosynthesis CF57_RS10595 PF01458 Uncharacterized protein family (UPF0051) CF57_RS10600 PF00005 ABC transporter CF57_RS10605 PF01458 Uncharacterized protein family (UPF0051) CF57_RS10610 PF00266 Aminotransferase class-V CF57_RS10615 PF02657 Fe-S metabolism associated domain CF57_RS10620 PF03734 L,D-transpeptidase catalytic domain CF57_RS10620 PF01476 LysM domain CF57_RS10620 PF17969 L,D-transpeptidase C-terminal domain CF57_RS10625 PF04728 Lipoprotein leucine-zipper CF57_RS10630 PF00224 Pyruvate kinase, barrel domain CF57_RS10630 PF02887 Pyruvate kinase, alpha/beta domain CF57_RS10635 PF10965 Protein of unknown function (DUF2767) CF57_RS10640 PF12800 4Fe-4S binding domain CF57_RS10640 PF13247 4Fe-4S dicluster domain CF57_RS10645 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 CF57_RS10645 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain CF57_RS10655 PF13247 4Fe-4S dicluster domain CF57_RS10660 PF01292 Prokaryotic cytochrome b561 CF57_RS10670 PF13454 FAD-NAD(P)-binding CF57_RS10675 PF08803 Putative mono-oxygenase ydhR CF57_RS10690 PF16168 Adhesin of bacterial autotransporter system, probable stalk CF57_RS10690 PF03212 Pertactin CF57_RS10695 PF01554 MatE CF57_RS10700 PF00677 Lumazine binding domain CF57_RS10710 PF07690 Major Facilitator Superfamily CF57_RS10715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS10715 PF03466 LysR substrate binding domain CF57_RS10720 PF00356 Bacterial regulatory proteins, lacI family CF57_RS10730 PF07690 Major Facilitator Superfamily CF57_RS10735 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CF57_RS10735 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CF57_RS10740 PF00877 NlpC/P60 family CF57_RS10745 PF00462 Glutaredoxin CF57_RS10750 PF08494 DEAD/H associated CF57_RS10750 PF00270 DEAD/DEAH box helicase CF57_RS10750 PF00271 Helicase conserved C-terminal domain CF57_RS10755 PF00929 Exonuclease CF57_RS10760 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CF57_RS10765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CF57_RS10770 PF16925 Tetracyclin repressor-like, C-terminal domain CF57_RS10770 PF00440 Bacterial regulatory proteins, tetR family CF57_RS10775 PF06945 Protein of unknown function (DUF1289) CF57_RS10780 PF00248 Aldo/keto reductase family CF57_RS10785 PF00080 Copper/zinc superoxide dismutase (SODC) CF57_RS10790 PF04632 Fusaric acid resistance protein family CF57_RS10795 PF00529 HlyD membrane-fusion protein of T1SS CF57_RS10795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF57_RS10800 PF07869 Protein of unknown function (DUF1656) CF57_RS10805 PF01047 MarR family CF57_RS10810 PF05433 Glycine zipper 2TM domain CF57_RS10815 PF03702 Anhydro-N-acetylmuramic acid kinase CF57_RS10820 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CF57_RS10825 PF01243 Pyridoxamine 5'-phosphate oxidase CF57_RS10825 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CF57_RS10830 PF00579 tRNA synthetases class I (W and Y) CF57_RS10830 PF01479 S4 domain CF57_RS10835 PF08543 Phosphomethylpyrimidine kinase CF57_RS10840 PF02798 Glutathione S-transferase, N-terminal domain CF57_RS10840 PF00043 Glutathione S-transferase, C-terminal domain CF57_RS10845 PF00854 POT family CF57_RS10855 PF00730 HhH-GPD superfamily base excision DNA repair protein CF57_RS10855 PF10576 Iron-sulfur binding domain of endonuclease III CF57_RS10855 PF00633 Helix-hairpin-helix motif CF57_RS10860 PF02508 Rnf-Nqr subunit, membrane protein CF57_RS10865 PF04205 FMN-binding domain CF57_RS10870 PF03116 NQR2, RnfD, RnfE family CF57_RS10875 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CF57_RS10875 PF10531 SLBB domain CF57_RS10875 PF12838 4Fe-4S dicluster domain CF57_RS10875 PF13375 RnfC Barrel sandwich hybrid domain CF57_RS10880 PF04060 Putative Fe-S cluster CF57_RS10885 PF02508 Rnf-Nqr subunit, membrane protein CF57_RS10890 PF10754 Protein of unknown function (DUF2569) CF57_RS10895 PF05321 Haemolysin expression modulating protein CF57_RS10905 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CF57_RS10905 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CF57_RS10910 PF00962 Adenosine/AMP deaminase CF57_RS10915 PF00155 Aminotransferase class I and II CF57_RS10920 PF02378 Phosphotransferase system, EIIC CF57_RS10920 PF00367 phosphotransferase system, EIIB CF57_RS10925 PF00356 Bacterial regulatory proteins, lacI family CF57_RS10925 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CF57_RS10935 PF00440 Bacterial regulatory proteins, tetR family CF57_RS10940 PF00703 Glycosyl hydrolases family 2 CF57_RS10940 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CF57_RS10940 PF02837 Glycosyl hydrolases family 2, sugar binding domain CF57_RS10950 PF03573 outer membrane porin, OprD family CF57_RS10955 PF03400 IS1 transposase CF57_RS10960 PF03573 outer membrane porin, OprD family CF57_RS10965 PF06097 Bacterial protein of unknown function (DUF945) CF57_RS10970 PF01238 Phosphomannose isomerase type I CF57_RS10975 PF05681 Fumarate hydratase (Fumerase) CF57_RS10975 PF05683 Fumarase C-terminus CF57_RS10980 PF10415 Fumarase C C-terminus CF57_RS10980 PF00206 Lyase CF57_RS10985 PF05472 DNA replication terminus site-binding protein (Ter protein) CF57_RS10990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS10990 PF00512 His Kinase A (phospho-acceptor) domain CF57_RS10990 PF00672 HAMP domain CF57_RS10995 PF00486 Transcriptional regulatory protein, C terminal CF57_RS10995 PF00072 Response regulator receiver domain CF57_RS11000 PF06942 GlpM protein CF57_RS11010 PF13520 Amino acid permease CF57_RS11015 PF07338 Protein of unknown function (DUF1471) CF57_RS11020 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CF57_RS11020 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CF57_RS11020 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CF57_RS11025 PF02233 NAD(P) transhydrogenase beta subunit CF57_RS11030 PF01594 AI-2E family transporter CF57_RS11035 PF00893 Small Multidrug Resistance protein CF57_RS11040 PF00893 Small Multidrug Resistance protein CF57_RS11045 PF00089 Trypsin CF57_RS11060 PF07690 Major Facilitator Superfamily CF57_RS11065 PF03466 LysR substrate binding domain CF57_RS11065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS11070 PF00480 ROK family CF57_RS11080 PF00654 Voltage gated chloride channel CF57_RS11085 PF02613 Nitrate reductase delta subunit CF57_RS11090 PF04976 DMSO reductase anchor subunit (DmsC) CF57_RS11095 PF13247 4Fe-4S dicluster domain CF57_RS11095 PF12800 4Fe-4S binding domain CF57_RS11100 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF57_RS11100 PF00384 Molybdopterin oxidoreductase CF57_RS11100 PF01568 Molydopterin dinucleotide binding domain CF57_RS11105 PF01568 Molydopterin dinucleotide binding domain CF57_RS11105 PF00384 Molybdopterin oxidoreductase CF57_RS11105 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF57_RS11110 PF06649 Protein of unknown function (DUF1161) CF57_RS11115 PF06788 Uncharacterised protein family (UPF0257) CF57_RS11120 PF13302 Acetyltransferase (GNAT) domain CF57_RS11125 PF06932 Protein of unknown function (DUF1283) CF57_RS11130 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CF57_RS11135 PF13378 Enolase C-terminal domain-like CF57_RS11135 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CF57_RS11140 PF00107 Zinc-binding dehydrogenase CF57_RS11140 PF08240 Alcohol dehydrogenase GroES-like domain CF57_RS11145 PF12167 Arm DNA-binding domain CF57_RS11145 PF00589 Phage integrase family CF57_RS11160 PF07358 Protein of unknown function (DUF1482) CF57_RS11165 PF05358 DicB protein CF57_RS11170 PF06147 Protein of unknown function (DUF968) CF57_RS11175 PF03589 Antitermination protein CF57_RS11180 PF00313 'Cold-shock' DNA-binding domain CF57_RS11185 PF00313 'Cold-shock' DNA-binding domain CF57_RS11190 PF04971 Bacteriophage P21 holin S CF57_RS11195 PF07041 Protein of unknown function (DUF1327) CF57_RS11200 PF00959 Phage lysozyme CF57_RS11205 PF10721 Protein of unknown function (DUF2514) CF57_RS11210 PF00313 'Cold-shock' DNA-binding domain CF57_RS11220 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system CF57_RS11230 PF13132 Domain of unknown function (DUF3950) CF57_RS11245 PF07471 Phage DNA packaging protein Nu1 CF57_RS11250 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CF57_RS11255 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CF57_RS11260 PF00239 Resolvase, N terminal domain CF57_RS11260 PF02796 Helix-turn-helix domain of resolvase CF57_RS11270 PF07690 Major Facilitator Superfamily CF57_RS11270 PF00083 Sugar (and other) transporter CF57_RS11275 PF01232 Mannitol dehydrogenase Rossmann domain CF57_RS11275 PF08125 Mannitol dehydrogenase C-terminal domain CF57_RS11280 PF14001 YdfZ protein CF57_RS11285 PF00392 Bacterial regulatory proteins, gntR family CF57_RS11285 PF07729 FCD domain CF57_RS11290 PF00106 short chain dehydrogenase CF57_RS11295 PF01432 Peptidase family M3 CF57_RS11300 PF02464 Competence-damaged protein CF57_RS11305 PF04076 Bacterial OB fold (BOF) protein CF57_RS11310 PF00990 Diguanylate cyclase, GGDEF domain CF57_RS11320 PF07690 Major Facilitator Superfamily CF57_RS11325 PF00892 EamA-like transporter family CF57_RS11330 PF13999 MarB protein CF57_RS11335 PF12833 Helix-turn-helix domain CF57_RS11340 PF01047 MarR family CF57_RS11345 PF01914 MarC family integral membrane protein CF57_RS11350 PF07690 Major Facilitator Superfamily CF57_RS11360 PF03466 LysR substrate binding domain CF57_RS11360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS11365 PF00171 Aldehyde dehydrogenase family CF57_RS11370 PF04960 Glutaminase CF57_RS11375 PF13811 Domain of unknown function (DUF4186) CF57_RS11380 PF00990 Diguanylate cyclase, GGDEF domain CF57_RS11385 PF08125 Mannitol dehydrogenase C-terminal domain CF57_RS11385 PF01232 Mannitol dehydrogenase Rossmann domain CF57_RS11390 PF01062 Bestrophin, RFP-TM, chloride channel CF57_RS11395 PF13649 Methyltransferase domain CF57_RS11400 PF03992 Antibiotic biosynthesis monooxygenase CF57_RS11405 PF01791 DeoC/LacD family aldolase CF57_RS11410 PF13407 Periplasmic binding protein domain CF57_RS11415 PF02653 Branched-chain amino acid transport system / permease component CF57_RS11420 PF02653 Branched-chain amino acid transport system / permease component CF57_RS11425 PF00005 ABC transporter CF57_RS11430 PF04198 Putative sugar-binding domain CF57_RS11435 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CF57_RS11435 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CF57_RS11440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CF57_RS11440 PF08447 PAS fold CF57_RS11445 PF02796 Helix-turn-helix domain of resolvase CF57_RS11445 PF00239 Resolvase, N terminal domain CF57_RS11450 PF13700 Domain of unknown function (DUF4158) CF57_RS11450 PF01526 Tn3 transposase DDE domain CF57_RS11460 PF00440 Bacterial regulatory proteins, tetR family CF57_RS11460 PF02909 Tetracyclin repressor-like, C-terminal domain CF57_RS11465 PF07690 Major Facilitator Superfamily CF57_RS11470 PF00892 EamA-like transporter family CF57_RS11480 PF01526 Tn3 transposase DDE domain CF57_RS11480 PF13700 Domain of unknown function (DUF4158) CF57_RS11485 PF13018 Extended Signal Peptide of Type V secretion system CF57_RS11490 PF01381 Helix-turn-helix CF57_RS11495 PF13657 HipA N-terminal domain CF57_RS11495 PF07804 HipA-like C-terminal domain CF57_RS11505 PF00577 Outer membrane usher protein CF57_RS11505 PF13953 PapC C-terminal domain CF57_RS11510 PF00419 Fimbrial protein CF57_RS11515 PF00419 Fimbrial protein CF57_RS11520 PF09160 FimH, mannose binding CF57_RS11525 PF00384 Molybdopterin oxidoreductase CF57_RS11530 PF00884 Sulfatase CF57_RS11535 PF13186 Iron-sulfur cluster-binding domain CF57_RS11535 PF04055 Radical SAM superfamily CF57_RS11540 PF00005 ABC transporter CF57_RS11540 PF06472 ABC transporter transmembrane region 2 CF57_RS11545 PF07715 TonB-dependent Receptor Plug Domain CF57_RS11550 PF05193 Peptidase M16 inactive domain CF57_RS11550 PF00675 Insulinase (Peptidase family M16) CF57_RS11560 PF00282 Pyridoxal-dependent decarboxylase conserved domain CF57_RS11565 PF13520 Amino acid permease CF57_RS11570 PF02638 Glycosyl hydrolase-like 10 CF57_RS11575 PF00990 Diguanylate cyclase, GGDEF domain CF57_RS11580 PF00990 Diguanylate cyclase, GGDEF domain CF57_RS11580 PF00563 EAL domain CF57_RS11580 PF13426 PAS domain CF57_RS11585 PF01427 D-ala-D-ala dipeptidase CF57_RS11590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF57_RS11595 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS11600 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS11600 PF12911 N-terminal TM domain of oligopeptide transport permease C CF57_RS11605 PF00005 ABC transporter CF57_RS11605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF57_RS11610 PF00005 ABC transporter CF57_RS11610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF57_RS11615 PF02566 OsmC-like protein CF57_RS11620 PF10684 Putative biofilm-dependent modulation protein CF57_RS11625 PF08136 30S ribosomal protein subunit S22 family CF57_RS11630 PF00390 Malic enzyme, N-terminal domain CF57_RS11630 PF03949 Malic enzyme, NAD binding domain CF57_RS11635 PF08240 Alcohol dehydrogenase GroES-like domain CF57_RS11635 PF00107 Zinc-binding dehydrogenase CF57_RS11640 PF01381 Helix-turn-helix CF57_RS11645 PF01292 Prokaryotic cytochrome b561 CF57_RS11650 PF09163 Formate dehydrogenase N, transmembrane CF57_RS11650 PF12800 4Fe-4S binding domain CF57_RS11650 PF13247 4Fe-4S dicluster domain CF57_RS11655 PF01568 Molydopterin dinucleotide binding domain CF57_RS11655 PF00384 Molybdopterin oxidoreductase CF57_RS11655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF57_RS11660 PF01568 Molydopterin dinucleotide binding domain CF57_RS11660 PF00384 Molybdopterin oxidoreductase CF57_RS11660 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF57_RS11665 PF00892 EamA-like transporter family CF57_RS11670 PF00267 Gram-negative porin CF57_RS11675 PF03400 IS1 transposase CF57_RS11680 PF07690 Major Facilitator Superfamily CF57_RS11685 PF14710 Respiratory nitrate reductase alpha N-terminal CF57_RS11685 PF00384 Molybdopterin oxidoreductase CF57_RS11685 PF01568 Molydopterin dinucleotide binding domain CF57_RS11690 PF13247 4Fe-4S dicluster domain CF57_RS11690 PF14711 Respiratory nitrate reductase beta C-terminal CF57_RS11695 PF02613 Nitrate reductase delta subunit CF57_RS11700 PF02665 Nitrate reductase gamma subunit CF57_RS11705 PF02567 Phenazine biosynthesis-like protein CF57_RS11710 PF00797 N-acetyltransferase CF57_RS11715 PF01613 Flavin reductase like domain CF57_RS11720 PF01361 Tautomerase enzyme CF57_RS11725 PF01609 Transposase DDE domain CF57_RS11725 PF13808 DDE_Tnp_1-associated CF57_RS11730 PF01609 Transposase DDE domain CF57_RS11730 PF13808 DDE_Tnp_1-associated CF57_RS11735 PF03400 IS1 transposase CF57_RS11755 PF17520 Family of unknown function (DUF5445) CF57_RS11760 PF13417 Glutathione S-transferase, N-terminal domain CF57_RS11765 PF00324 Amino acid permease CF57_RS11775 PF00593 TonB dependent receptor CF57_RS11775 PF07715 TonB-dependent Receptor Plug Domain CF57_RS11780 PF07729 FCD domain CF57_RS11780 PF00392 Bacterial regulatory proteins, gntR family CF57_RS11785 PF00107 Zinc-binding dehydrogenase CF57_RS11785 PF16884 N-terminal domain of oxidoreductase CF57_RS11790 PF00583 Acetyltransferase (GNAT) family CF57_RS11795 PF04657 Putative inner membrane exporter, YdcZ CF57_RS11800 PF10735 Protein of unknown function (DUF2526) CF57_RS11805 PF10753 Toxin GhoT_OrtT CF57_RS11815 PF00171 Aldehyde dehydrogenase family CF57_RS11820 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS11825 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS11830 PF00005 ABC transporter CF57_RS11830 PF08402 TOBE domain CF57_RS11835 PF13416 Bacterial extracellular solute-binding protein CF57_RS11840 PF00155 Aminotransferase class I and II CF57_RS11840 PF00392 Bacterial regulatory proteins, gntR family CF57_RS11845 PF01381 Helix-turn-helix CF57_RS11845 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system CF57_RS11855 PF10829 Protein of unknown function (DUF2554) CF57_RS11865 PF01381 Helix-turn-helix CF57_RS11865 PF07883 Cupin domain CF57_RS11870 PF03594 Benzoate membrane transport protein CF57_RS11875 PF07282 Putative transposase DNA-binding domain CF57_RS11875 PF12323 Helix-turn-helix domain CF57_RS11875 PF01385 Probable transposase CF57_RS11880 PF01797 Transposase IS200 like CF57_RS11890 PF11769 Protein of unknown function (DUF3313) CF57_RS11895 PF03848 Tellurite resistance protein TehB CF57_RS11900 PF03595 Voltage-dependent anion channel CF57_RS11905 PF18836 Beta solenoid repeat from YDCK CF57_RS11910 PF13302 Acetyltransferase (GNAT) domain CF57_RS11915 PF04325 Protein of unknown function (DUF465) CF57_RS11925 PF04349 Periplasmic glucan biosynthesis protein, MdoG CF57_RS11930 PF07063 Domain of unknown function (DUF1338) CF57_RS11935 PF03466 LysR substrate binding domain CF57_RS11935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS11940 PF02203 Tar ligand binding domain homologue CF57_RS11940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CF57_RS11940 PF00672 HAMP domain CF57_RS11950 PF13333 Integrase core domain CF57_RS11950 PF00665 Integrase core domain CF57_RS11950 PF13276 HTH-like domain CF57_RS11955 PF01848 Hok/gef family CF57_RS11965 PF01292 Prokaryotic cytochrome b561 CF57_RS11970 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CF57_RS11970 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CF57_RS11975 PF00171 Aldehyde dehydrogenase family CF57_RS11980 PF02698 DUF218 domain CF57_RS11985 PF00270 DEAD/DEAH box helicase CF57_RS11985 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CF57_RS11985 PF11898 Domain of unknown function (DUF3418) CF57_RS11985 PF00271 Helicase conserved C-terminal domain CF57_RS11985 PF04408 Helicase associated domain (HA2) CF57_RS11990 PF02525 Flavodoxin-like fold CF57_RS11995 PF00782 Dual specificity phosphatase, catalytic domain CF57_RS12000 PF12146 Serine aminopeptidase, S33 CF57_RS12000 PF12147 Putative methyltransferase CF57_RS12010 PF01066 CDP-alcohol phosphatidyltransferase CF57_RS12030 PF00132 Bacterial transferase hexapeptide (six repeats) CF57_RS12035 PF07848 PaaX-like protein CF57_RS12035 PF08223 PaaX-like protein C-terminal domain CF57_RS12040 PF00501 AMP-binding enzyme CF57_RS12040 PF14535 AMP-binding enzyme C-terminal domain CF57_RS12045 PF02803 Thiolase, C-terminal domain CF57_RS12045 PF00108 Thiolase, N-terminal domain CF57_RS12050 PF03061 Thioesterase superfamily CF57_RS12055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CF57_RS12055 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CF57_RS12055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CF57_RS12060 PF00378 Enoyl-CoA hydratase/isomerase CF57_RS12065 PF00378 Enoyl-CoA hydratase/isomerase CF57_RS12070 PF00111 2Fe-2S iron-sulfur cluster binding domain CF57_RS12070 PF00175 Oxidoreductase NAD-binding domain CF57_RS12070 PF00970 Oxidoreductase FAD-binding domain CF57_RS12075 PF01883 Iron-sulfur cluster assembly protein CF57_RS12080 PF05138 Phenylacetic acid catabolic protein CF57_RS12085 PF06243 Phenylacetic acid degradation B CF57_RS12090 PF05138 Phenylacetic acid catabolic protein CF57_RS12095 PF00171 Aldehyde dehydrogenase family CF57_RS12095 PF01575 MaoC like domain CF57_RS12100 PF07833 Copper amine oxidase N-terminal domain CF57_RS12100 PF02727 Copper amine oxidase, N2 domain CF57_RS12100 PF02728 Copper amine oxidase, N3 domain CF57_RS12100 PF01179 Copper amine oxidase, enzyme domain CF57_RS12105 PF00171 Aldehyde dehydrogenase family CF57_RS12110 PF14525 AraC-binding-like domain CF57_RS12110 PF12833 Helix-turn-helix domain CF57_RS12115 PF07027 Protein of unknown function (DUF1318) CF57_RS12120 PF13617 YnbE-like lipoprotein CF57_RS12125 PF11739 Dicarboxylate transport CF57_RS12130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CF57_RS12130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CF57_RS12135 PF03724 META domain CF57_RS12140 PF03891 Domain of unknown function (DUF333) CF57_RS12145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CF57_RS12145 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CF57_RS12145 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CF57_RS12145 PF10371 Domain of unknown function CF57_RS12145 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CF57_RS12150 PF00267 Gram-negative porin CF57_RS12155 PF00582 Universal stress protein family CF57_RS12160 PF01171 PP-loop family CF57_RS12165 PF00271 Helicase conserved C-terminal domain CF57_RS12165 PF00270 DEAD/DEAH box helicase CF57_RS12165 PF03880 DbpA RNA binding domain CF57_RS12175 PF01544 CorA-like Mg2+ transporter protein CF57_RS12180 PF00990 Diguanylate cyclase, GGDEF domain CF57_RS12180 PF08448 PAS fold CF57_RS12185 PF01713 Smr domain CF57_RS12195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS12195 PF03466 LysR substrate binding domain CF57_RS12200 PF07687 Peptidase dimerisation domain CF57_RS12200 PF01546 Peptidase family M20/M25/M40 CF57_RS12205 PF01546 Peptidase family M20/M25/M40 CF57_RS12215 PF03806 AbgT putative transporter family CF57_RS12220 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CF57_RS12220 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CF57_RS12225 PF00027 Cyclic nucleotide-binding domain CF57_RS12225 PF00325 Bacterial regulatory proteins, crp family CF57_RS12230 PF00582 Universal stress protein family CF57_RS12235 PF10749 Protein of unknown function (DUF2534) CF57_RS12240 PF00924 Mechanosensitive ion channel CF57_RS12245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF57_RS12255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS12255 PF03466 LysR substrate binding domain CF57_RS12260 PF12146 Serine aminopeptidase, S33 CF57_RS12270 PF00246 Zinc carboxypeptidase CF57_RS12275 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CF57_RS12275 PF13378 Enolase C-terminal domain-like CF57_RS12280 PF08534 Redoxin CF57_RS12285 PF00158 Sigma-54 interaction domain CF57_RS12285 PF13188 PAS domain CF57_RS12285 PF18024 Helix-turn-helix domain CF57_RS12290 PF05128 Domain of unknown function (DUF697) CF57_RS12295 PF04317 YcjX-like family, DUF463 CF57_RS12300 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CF57_RS12300 PF00356 Bacterial regulatory proteins, lacI family CF57_RS12305 PF09381 Outer membrane protein G (OmpG) CF57_RS12310 PF00005 ABC transporter CF57_RS12310 PF17912 MalK OB fold domain CF57_RS12310 PF03459 TOBE domain CF57_RS12315 PF13419 Haloacid dehalogenase-like hydrolase CF57_RS12320 PF03636 Glycosyl hydrolase family 65, N-terminal domain CF57_RS12320 PF03632 Glycosyl hydrolase family 65 central catalytic domain CF57_RS12320 PF03633 Glycosyl hydrolase family 65, C-terminal domain CF57_RS12325 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CF57_RS12325 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CF57_RS12335 PF00107 Zinc-binding dehydrogenase CF57_RS12340 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS12345 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS12350 PF01547 Bacterial extracellular solute-binding protein CF57_RS12355 PF00128 Alpha amylase, catalytic domain CF57_RS12360 PF00581 Rhodanese-like domain CF57_RS12365 PF09584 Phage shock protein PspD (Phageshock_PspD) CF57_RS12370 PF04024 PspC domain CF57_RS12375 PF06667 Phage shock protein B CF57_RS12380 PF04012 PspA/IM30 family CF57_RS12385 PF02954 Bacterial regulatory protein, Fis family CF57_RS12385 PF00158 Sigma-54 interaction domain CF57_RS12390 PF00202 Aminotransferase class-III CF57_RS12395 PF01266 FAD dependent oxidoreductase CF57_RS12400 PF00171 Aldehyde dehydrogenase family CF57_RS12405 PF01381 Helix-turn-helix CF57_RS12405 PF07883 Cupin domain CF57_RS12410 PF07722 Peptidase C26 CF57_RS12415 PF00120 Glutamine synthetase, catalytic domain CF57_RS12420 PF00324 Amino acid permease CF57_RS12425 PF10820 Protein of unknown function (DUF2543) CF57_RS12435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF57_RS12440 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS12450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF57_RS12450 PF00005 ABC transporter CF57_RS12455 PF00005 ABC transporter CF57_RS12460 PF04480 Protein of unknown function (DUF559) CF57_RS12480 PF17876 Cold shock domain CF57_RS12480 PF08206 Ribonuclease B OB domain CF57_RS12480 PF00773 RNB domain CF57_RS12480 PF00575 S1 RNA binding domain CF57_RS12490 PF00563 EAL domain CF57_RS12490 PF00990 Diguanylate cyclase, GGDEF domain CF57_RS12490 PF13426 PAS domain CF57_RS12500 PF08220 DeoR-like helix-turn-helix domain CF57_RS12500 PF00455 DeoR C terminal sensor domain CF57_RS12505 PF05433 Glycine zipper 2TM domain CF57_RS12510 PF01253 Translation initiation factor SUI1 CF57_RS12515 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CF57_RS12520 PF18073 Rubredoxin metal binding domain CF57_RS12525 PF06305 Lipopolysaccharide assembly protein A domain CF57_RS12530 PF01569 PAP2 superfamily CF57_RS12535 PF00925 GTP cyclohydrolase II CF57_RS12540 PF00330 Aconitase family (aconitate hydratase) CF57_RS12540 PF00694 Aconitase C-terminal domain CF57_RS12555 PF03400 IS1 transposase CF57_RS12560 PF01544 CorA-like Mg2+ transporter protein CF57_RS12570 PF09992 Phosphodiester glycosidase CF57_RS12575 PF03811 InsA N-terminal domain CF57_RS12575 PF12759 InsA C-terminal domain CF57_RS12580 PF03400 IS1 transposase CF57_RS12595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS12595 PF03466 LysR substrate binding domain CF57_RS12600 PF01131 DNA topoisomerase CF57_RS12600 PF01751 Toprim domain CF57_RS12600 PF01396 Topoisomerase DNA binding C4 zinc finger CF57_RS12600 PF08272 Topoisomerase I zinc-ribbon-like CF57_RS12610 PF10692 Protein of unknown function (DUF2498) CF57_RS12615 PF08496 Peptidase family S49 N-terminal CF57_RS12615 PF01343 Peptidase family S49 CF57_RS12625 PF00106 short chain dehydrogenase CF57_RS12630 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CF57_RS12630 PF12557 Cob(I)alamin adenosyltransferase N terminal CF57_RS12635 PF00849 RNA pseudouridylate synthase CF57_RS12635 PF01479 S4 domain CF57_RS12645 PF01300 Telomere recombination CF57_RS12650 PF02811 PHP domain CF57_RS12655 PF00425 chorismate binding enzyme CF57_RS12655 PF04715 Anthranilate synthase component I, N terminal region CF57_RS12660 PF00117 Glutamine amidotransferase class-I CF57_RS12660 PF02885 Glycosyl transferase family, helical bundle domain CF57_RS12660 PF00591 Glycosyl transferase family, a/b domain CF57_RS12665 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CF57_RS12665 PF00218 Indole-3-glycerol phosphate synthase CF57_RS12670 PF00291 Pyridoxal-phosphate dependent enzyme CF57_RS12675 PF00290 Tryptophan synthase alpha chain CF57_RS12680 PF10685 Stress-induced bacterial acidophilic repeat motif CF57_RS12685 PF05974 Domain of unknown function (DUF892) CF57_RS12690 PF05974 Domain of unknown function (DUF892) CF57_RS12695 PF03922 OmpW family CF57_RS12705 PF04279 Intracellular septation protein A CF57_RS12710 PF03061 Thioesterase superfamily CF57_RS12715 PF03544 Gram-negative bacterial TonB protein C-terminal CF57_RS12720 PF03795 YCII-related domain CF57_RS12725 PF07885 Ion channel CF57_RS12725 PF02254 TrkA-N domain CF57_RS12735 PF13396 Phospholipase_D-nuclease N-terminal CF57_RS12735 PF13091 PLD-like domain CF57_RS12740 PF04269 Protein of unknown function, DUF440 CF57_RS12745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF57_RS12745 PF00005 ABC transporter CF57_RS12750 PF00005 ABC transporter CF57_RS12750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF57_RS12755 PF12911 N-terminal TM domain of oligopeptide transport permease C CF57_RS12755 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS12760 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS12765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF57_RS12770 PF01914 MarC family integral membrane protein CF57_RS12775 PF00465 Iron-containing alcohol dehydrogenase CF57_RS12775 PF00171 Aldehyde dehydrogenase family CF57_RS12780 PF00265 Thymidine kinase CF57_RS12785 PF00816 H-NS histone family CF57_RS12790 PF00483 Nucleotidyl transferase CF57_RS12795 PF00072 Response regulator receiver domain CF57_RS12800 PF01734 Patatin-like phospholipase CF57_RS12805 PF02810 SEC-C motif CF57_RS12810 PF01842 ACT domain CF57_RS12810 PF00551 Formyl transferase CF57_RS12830 PF02665 Nitrate reductase gamma subunit CF57_RS12835 PF02613 Nitrate reductase delta subunit CF57_RS12840 PF14711 Respiratory nitrate reductase beta C-terminal CF57_RS12840 PF13247 4Fe-4S dicluster domain CF57_RS12845 PF01568 Molydopterin dinucleotide binding domain CF57_RS12845 PF00384 Molybdopterin oxidoreductase CF57_RS12845 PF14710 Respiratory nitrate reductase alpha N-terminal CF57_RS12850 PF07690 Major Facilitator Superfamily CF57_RS12860 PF07730 Histidine kinase CF57_RS12860 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CF57_RS12860 PF00672 HAMP domain CF57_RS12860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS12865 PF00072 Response regulator receiver domain CF57_RS12865 PF00196 Bacterial regulatory proteins, luxR family CF57_RS12870 PF11924 Inverse autotransporter, beta-domain CF57_RS12875 PF02635 DsrE/DsrF-like family CF57_RS12880 PF04752 ChaC-like protein CF57_RS12885 PF06150 ChaB CF57_RS12890 PF01699 Sodium/calcium exchanger protein CF57_RS12895 PF13940 Toxin Ldr, type I toxin-antitoxin system CF57_RS12900 PF13940 Toxin Ldr, type I toxin-antitoxin system CF57_RS12910 PF13276 HTH-like domain CF57_RS12910 PF00665 Integrase core domain CF57_RS12910 PF13333 Integrase core domain CF57_RS12915 PF13940 Toxin Ldr, type I toxin-antitoxin system CF57_RS12920 PF00793 DAHP synthetase I family CF57_RS12925 PF13369 Transglutaminase-like superfamily CF57_RS12930 PF04247 Invasion gene expression up-regulator, SirB CF57_RS12935 PF17827 PrmC N-terminal domain CF57_RS12935 PF13847 Methyltransferase domain CF57_RS12940 PF00472 RF-1 domain CF57_RS12940 PF03462 PCRF domain CF57_RS12945 PF01488 Shikimate / quinate 5-dehydrogenase CF57_RS12945 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CF57_RS12945 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CF57_RS12950 PF03550 Outer membrane lipoprotein LolB CF57_RS12955 PF00288 GHMP kinases N terminal domain CF57_RS12955 PF08544 GHMP kinases C terminal CF57_RS12960 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CF57_RS12960 PF14572 Phosphoribosyl synthetase-associated domain CF57_RS12965 PF00916 Sulfate permease family CF57_RS12965 PF01740 STAS domain CF57_RS12970 PF10762 Protein of unknown function (DUF2583) CF57_RS12975 PF01195 Peptidyl-tRNA hydrolase CF57_RS12980 PF06071 Protein of unknown function (DUF933) CF57_RS12980 PF01926 50S ribosome-binding GTPase CF57_RS12990 PF03797 Autotransporter beta-domain CF57_RS12990 PF03212 Pertactin CF57_RS12995 PF00989 PAS fold CF57_RS12995 PF02954 Bacterial regulatory protein, Fis family CF57_RS12995 PF00158 Sigma-54 interaction domain CF57_RS13000 PF02733 Dak1 domain CF57_RS13005 PF02734 DAK2 domain CF57_RS13010 PF00381 PTS HPr component phosphorylation site CF57_RS13010 PF05524 PEP-utilising enzyme, N-terminal CF57_RS13010 PF03610 PTS system fructose IIA component CF57_RS13010 PF00391 PEP-utilising enzyme, mobile domain CF57_RS13015 PF01204 Trehalase CF57_RS13025 PF04226 Transglycosylase associated protein CF57_RS13030 PF07317 Flagellar regulator YcgR CF57_RS13030 PF07238 PilZ domain CF57_RS13035 PF01464 Transglycosylase SLT domain CF57_RS13040 PF17676 LD-carboxypeptidase C-terminal domain CF57_RS13040 PF02016 LD-carboxypeptidase N-terminal domain CF57_RS13045 PF00999 Sodium/hydrogen exchanger family CF57_RS13045 PF02080 TrkA-C domain CF57_RS13045 PF03471 Transporter associated domain CF57_RS13050 PF00842 Alanine racemase, C-terminal domain CF57_RS13050 PF01168 Alanine racemase, N-terminal domain CF57_RS13055 PF01266 FAD dependent oxidoreductase CF57_RS13060 PF04293 SpoVR like protein CF57_RS13065 PF07840 FadR C-terminal domain CF57_RS13065 PF00392 Bacterial regulatory proteins, gntR family CF57_RS13070 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CF57_RS13075 PF02600 Disulfide bond formation protein DsbB CF57_RS13080 PF11799 impB/mucB/samB family C-terminal domain CF57_RS13080 PF13438 Domain of unknown function (DUF4113) CF57_RS13080 PF00817 impB/mucB/samB family CF57_RS13080 PF11798 IMS family HHH motif CF57_RS13085 PF00717 Peptidase S24-like CF57_RS13090 PF06109 Haemolysin E (HlyE) CF57_RS13095 PF03692 Putative zinc- or iron-chelating domain CF57_RS13100 PF01557 Fumarylacetoacetate (FAA) hydrolase family CF57_RS13105 PF05166 YcgL domain CF57_RS13115 PF04151 Bacterial pre-peptidase C-terminal domain CF57_RS13120 PF05666 Fels-1 Prophage Protein-like CF57_RS13125 PF05209 Septum formation inhibitor MinC, N-terminal domain CF57_RS13125 PF03775 Septum formation inhibitor MinC, C-terminal domain CF57_RS13130 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CF57_RS13135 PF03776 Septum formation topological specificity factor MinE CF57_RS13140 PF03797 Autotransporter beta-domain CF57_RS13150 PF13436 Glycine-zipper domain CF57_RS13155 PF16456 YmgD protein CF57_RS13170 PF03400 IS1 transposase CF57_RS13185 PF00563 EAL domain CF57_RS13185 PF12792 CSS motif domain associated with EAL CF57_RS13195 PF10798 Biofilm development protein YmgB/AriR CF57_RS13205 PF10798 Biofilm development protein YmgB/AriR CF57_RS13210 PF00563 EAL domain CF57_RS13210 PF04940 Sensors of blue-light using FAD CF57_RS13215 PF13411 MerR HTH family regulatory protein CF57_RS13220 PF07166 Protein of unknown function (DUF1398) CF57_RS13235 PF00180 Isocitrate/isopropylmalate dehydrogenase CF57_RS13240 PF00849 RNA pseudouridylate synthase CF57_RS13245 PF00293 NUDIX domain CF57_RS13255 PF04356 Protein of unknown function (DUF489) CF57_RS13260 PF08328 Adenylosuccinate lyase C-terminal CF57_RS13260 PF00206 Lyase CF57_RS13265 PF00072 Response regulator receiver domain CF57_RS13265 PF00486 Transcriptional regulatory protein, C terminal CF57_RS13270 PF08918 PhoQ Sensor CF57_RS13270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS13275 PF08007 Cupin superfamily protein CF57_RS13280 PF01546 Peptidase family M20/M25/M40 CF57_RS13280 PF07687 Peptidase dimerisation domain CF57_RS13290 PF08402 TOBE domain CF57_RS13290 PF00005 ABC transporter CF57_RS13295 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS13300 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS13305 PF13416 Bacterial extracellular solute-binding protein CF57_RS13310 PF12158 Protein of unknown function (DUF3592) CF57_RS13315 PF04536 TPM domain CF57_RS13320 PF02146 Sir2 family CF57_RS13325 PF00480 ROK family CF57_RS13330 PF12704 MacB-like periplasmic core domain CF57_RS13330 PF02687 FtsX-like permease family CF57_RS13335 PF00005 ABC transporter CF57_RS13340 PF12704 MacB-like periplasmic core domain CF57_RS13340 PF02687 FtsX-like permease family CF57_RS13350 PF17757 UvrB interaction domain CF57_RS13350 PF03461 TRCF domain CF57_RS13350 PF00271 Helicase conserved C-terminal domain CF57_RS13350 PF02559 CarD-like/TRCF domain CF57_RS13350 PF00270 DEAD/DEAH box helicase CF57_RS13355 PF01476 LysM domain CF57_RS13355 PF03734 L,D-transpeptidase catalytic domain CF57_RS13355 PF17969 L,D-transpeptidase C-terminal domain CF57_RS13360 PF07338 Protein of unknown function (DUF1471) CF57_RS13365 PF00440 Bacterial regulatory proteins, tetR family CF57_RS13370 PF05433 Glycine zipper 2TM domain CF57_RS13375 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF57_RS13380 PF05728 Uncharacterised protein family (UPF0227) CF57_RS13385 PF00933 Glycosyl hydrolase family 3 N terminal domain CF57_RS13390 PF01636 Phosphotransferase enzyme family CF57_RS13395 PF13036 Peptidoglycan-synthase activator LpoB CF57_RS13400 PF07233 Protein of unknown function (DUF1425) CF57_RS13405 PF01230 HIT domain CF57_RS13410 PF00593 TonB dependent receptor CF57_RS13410 PF07715 TonB-dependent Receptor Plug Domain CF57_RS13415 PF00367 phosphotransferase system, EIIB CF57_RS13415 PF02378 Phosphotransferase system, EIIC CF57_RS13420 PF01026 TatD related DNase CF57_RS13425 PF09115 DNA polymerase III, delta subunit, C terminal CF57_RS13430 PF02223 Thymidylate kinase CF57_RS13435 PF02618 YceG-like family CF57_RS13440 PF01063 Amino-transferase class IV CF57_RS13445 PF02801 Beta-ketoacyl synthase, C-terminal domain CF57_RS13445 PF00109 Beta-ketoacyl synthase, N-terminal domain CF57_RS13450 PF00550 Phosphopantetheine attachment site CF57_RS13460 PF00698 Acyl transferase domain CF57_RS13465 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CF57_RS13465 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CF57_RS13470 PF02504 Fatty acid synthesis protein CF57_RS13475 PF01783 Ribosomal L32p protein family CF57_RS13480 PF02620 Large ribosomal RNA subunit accumulation protein YceD CF57_RS13485 PF02545 Maf-like protein CF57_RS13490 PF00849 RNA pseudouridylate synthase CF57_RS13490 PF01479 S4 domain CF57_RS13500 PF10150 Ribonuclease E/G family CF57_RS13500 PF00575 S1 RNA binding domain CF57_RS13500 PF12111 Polyribonucleotide phosphorylase C terminal CF57_RS13505 PF00669 Bacterial flagellin N-terminal helical region CF57_RS13510 PF00460 Flagella basal body rod protein CF57_RS13510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CF57_RS13515 PF10135 Rod binding protein CF57_RS13515 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CF57_RS13520 PF02119 Flagellar P-ring protein CF57_RS13525 PF02107 Flagellar L-ring protein CF57_RS13530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CF57_RS13530 PF00460 Flagella basal body rod protein CF57_RS13535 PF00460 Flagella basal body rod protein CF57_RS13535 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CF57_RS13540 PF07559 Flagellar basal body protein FlaE CF57_RS13540 PF00460 Flagella basal body rod protein CF57_RS13540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CF57_RS13545 PF13861 FlgD Tudor-like domain CF57_RS13545 PF13860 FlgD Ig-like domain CF57_RS13545 PF03963 Flagellar hook capping protein - N-terminal region CF57_RS13550 PF00460 Flagella basal body rod protein CF57_RS13550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CF57_RS13555 PF00460 Flagella basal body rod protein CF57_RS13560 PF13144 Chaperone for flagella basal body P-ring formation CF57_RS13565 PF04316 Anti-sigma-28 factor, FlgM CF57_RS13570 PF05130 FlgN protein CF57_RS13575 PF03023 Lipid II flippase MurJ CF57_RS13580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CF57_RS13585 PF04337 Protein of unknown function, DUF480 CF57_RS13590 PF13302 Acetyltransferase (GNAT) domain CF57_RS13595 PF07690 Major Facilitator Superfamily CF57_RS13600 PF13417 Glutathione S-transferase, N-terminal domain CF57_RS13600 PF04399 Glutaredoxin 2, C terminal domain CF57_RS13605 PF07273 Protein of unknown function (DUF1439) CF57_RS13610 PF01979 Amidohydrolase family CF57_RS13615 PF06183 DinI-like family CF57_RS13620 PF13991 BssS protein family CF57_RS13625 PF01266 FAD dependent oxidoreductase CF57_RS13630 PF10968 Protein of unknown function (DUF2770) CF57_RS13635 PF01292 Prokaryotic cytochrome b561 CF57_RS13640 PF04264 YceI-like domain CF57_RS13645 PF17773 UPF0176 acylphosphatase like domain CF57_RS13645 PF00581 Rhodanese-like domain CF57_RS13645 PF12368 Rhodanase C-terminal CF57_RS13650 PF03279 Bacterial lipid A biosynthesis acyltransferase CF57_RS13655 PF07690 Major Facilitator Superfamily CF57_RS13665 PF13984 MsyB protein CF57_RS13670 PF07119 Protein of unknown function (DUF1375) CF57_RS13675 PF00535 Glycosyl transferase family 2 CF57_RS13680 PF04349 Periplasmic glucan biosynthesis protein, MdoG CF57_RS13695 PF01757 Acyltransferase family CF57_RS13700 PF13091 PLD-like domain CF57_RS13705 PF01661 Macro domain CF57_RS13710 PF03400 IS1 transposase CF57_RS13720 PF10610 Thin aggregative fimbriae synthesis protein CF57_RS13725 PF07012 Curlin associated repeat CF57_RS13730 PF07012 Curlin associated repeat CF57_RS13740 PF00196 Bacterial regulatory proteins, luxR family CF57_RS13745 PF10627 Curli assembly protein CsgE CF57_RS13750 PF10614 Type VIII secretion system (T8SS), CsgF protein CF57_RS13755 PF03783 Curli production assembly/transport component CsgG CF57_RS13760 PF06496 Protein of unknown function (DUF1097) CF57_RS13765 PF02613 Nitrate reductase delta subunit CF57_RS13770 PF02811 PHP domain CF57_RS13775 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CF57_RS13800 PF01527 Transposase CF57_RS13805 PF13333 Integrase core domain CF57_RS13805 PF00665 Integrase core domain CF57_RS13805 PF13276 HTH-like domain CF57_RS13820 PF14883 Hypothetical glycosyl hydrolase family 13 CF57_RS13820 PF01522 Polysaccharide deacetylase CF57_RS13825 PF00535 Glycosyl transferase family 2 CF57_RS13830 PF13994 PgaD-like protein CF57_RS13835 PF02562 PhoH-like protein CF57_RS13845 PF04261 Dyp-type peroxidase family CF57_RS13850 PF09375 Imelysin CF57_RS13850 PF13473 Cupredoxin-like domain CF57_RS13855 PF03239 Iron permease FTR1 family CF57_RS13865 PF00474 Sodium:solute symporter family CF57_RS13875 PF00171 Aldehyde dehydrogenase family CF57_RS13875 PF01619 Proline dehydrogenase CF57_RS13875 PF14850 DNA-binding domain of Proline dehydrogenase CF57_RS13875 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CF57_RS13880 PF08362 YcdC-like protein, C-terminal region CF57_RS13880 PF00440 Bacterial regulatory proteins, tetR family CF57_RS13885 PF00296 Luciferase-like monooxygenase CF57_RS13890 PF00857 Isochorismatase family CF57_RS13895 PF01042 Endoribonuclease L-PSP CF57_RS13900 PF12697 Alpha/beta hydrolase family CF57_RS13905 PF00881 Nitroreductase family CF57_RS13910 PF01613 Flavin reductase like domain CF57_RS13915 PF00860 Permease family CF57_RS13920 PF10685 Stress-induced bacterial acidophilic repeat motif CF57_RS13930 PF03358 NADPH-dependent FMN reductase CF57_RS13935 PF13993 YccJ-like protein CF57_RS13940 PF00328 Histidine phosphatase superfamily (branch 2) CF57_RS13950 PF00226 DnaJ domain CF57_RS13950 PF01556 DnaJ C terminal domain CF57_RS13960 PF02613 Nitrate reductase delta subunit CF57_RS13965 PF18364 Molybdopterin oxidoreductase N-terminal domain CF57_RS13965 PF00384 Molybdopterin oxidoreductase CF57_RS13965 PF01568 Molydopterin dinucleotide binding domain CF57_RS13970 PF03264 NapC/NirT cytochrome c family, N-terminal region CF57_RS13975 PF00486 Transcriptional regulatory protein, C terminal CF57_RS13975 PF00072 Response regulator receiver domain CF57_RS13980 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CF57_RS13985 PF00672 HAMP domain CF57_RS13985 PF01627 Hpt domain CF57_RS13985 PF00512 His Kinase A (phospho-acceptor) domain CF57_RS13985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS13985 PF00072 Response regulator receiver domain CF57_RS13990 PF12801 4Fe-4S binding domain CF57_RS13995 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system CF57_RS14000 PF15939 Putative antitoxin of bacterial toxin-antitoxin system CF57_RS14005 PF00313 'Cold-shock' DNA-binding domain CF57_RS14010 PF00313 'Cold-shock' DNA-binding domain CF57_RS14020 PF03400 IS1 transposase CF57_RS14025 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF CF57_RS14030 PF06251 Capsule biosynthesis GfcC CF57_RS14035 PF06082 Exopolysaccharide biosynthesis protein YbjH CF57_RS14040 PF10531 SLBB domain CF57_RS14040 PF02563 Polysaccharide biosynthesis/export protein CF57_RS14040 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CF57_RS14045 PF01451 Low molecular weight phosphotyrosine protein phosphatase CF57_RS14050 PF02706 Chain length determinant protein CF57_RS14050 PF13807 G-rich domain on putative tyrosine kinase CF57_RS14050 PF13614 AAA domain CF57_RS14055 PF00328 Histidine phosphatase superfamily (branch 2) CF57_RS14060 PF08173 Membrane bound YbgT-like protein CF57_RS14065 PF02322 Cytochrome bd terminal oxidase subunit II CF57_RS14070 PF01654 Cytochrome bd terminal oxidase subunit I CF57_RS14075 PF04809 HupH hydrogenase expression protein, C-terminal conserved region CF57_RS14080 PF07449 Hydrogenase-1 expression protein HyaE CF57_RS14085 PF01750 Hydrogenase maturation protease CF57_RS14090 PF01292 Prokaryotic cytochrome b561 CF57_RS14095 PF00374 Nickel-dependent hydrogenase CF57_RS14100 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CF57_RS14100 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CF57_RS14110 PF01027 Inhibitor of apoptosis-promoting Bax1 CF57_RS14115 PF04358 DsrC like protein CF57_RS14120 PF00708 Acylphosphatase CF57_RS14125 PF10672 S-adenosylmethionine-dependent methyltransferase CF57_RS14125 PF17785 PUA-like domain CF57_RS14130 PF08755 Hemimethylated DNA-binding protein YccV like CF57_RS14135 PF13380 CoA binding domain CF57_RS14145 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CF57_RS14150 PF02142 MGS-like domain CF57_RS14155 PF00580 UvrD/REP helicase N-terminal domain CF57_RS14155 PF13361 UvrD-like helicase C-terminal domain CF57_RS14155 PF12462 DNA helicase IV / RNA helicase N terminal CF57_RS14160 PF03733 Inner membrane component domain CF57_RS14165 PF12805 FUSC-like inner membrane protein yccS CF57_RS14170 PF04994 TfoX C-terminal domain CF57_RS14170 PF04993 TfoX N-terminal domain CF57_RS14175 PF03846 Cell division inhibitor SulA CF57_RS14185 PF01389 OmpA-like transmembrane domain CF57_RS14185 PF00691 OmpA family CF57_RS14190 PF06303 MatP N-terminal domain CF57_RS14190 PF17414 MatP C-terminal ribbon-helix-helix domain CF57_RS14195 PF05362 Lon protease (S16) C-terminal proteolytic domain CF57_RS14195 PF13654 AAA domain CF57_RS14200 PF07977 FabA-like domain CF57_RS14205 PF04957 Ribosome modulation factor CF57_RS14210 PF03886 ABC-type transport auxiliary lipoprotein component CF57_RS14215 PF02470 MlaD protein CF57_RS14220 PF04403 Paraquat-inducible protein A CF57_RS14225 PF12848 ABC transporter CF57_RS14225 PF16326 ABC transporter C-terminal domain CF57_RS14225 PF00005 ABC transporter CF57_RS14230 PF02926 THUMP domain CF57_RS14230 PF10672 S-adenosylmethionine-dependent methyltransferase CF57_RS14230 PF01170 Putative RNA methylase family UPF0020 CF57_RS14235 PF03473 MOSC domain CF57_RS14235 PF00111 2Fe-2S iron-sulfur cluster binding domain CF57_RS14235 PF03476 MOSC N-terminal beta barrel domain CF57_RS14240 PF07126 Cell-division protein ZapC CF57_RS14245 PF01180 Dihydroorotate dehydrogenase CF57_RS14250 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF57_RS14250 PF02753 Pili assembly chaperone PapD, C-terminal domain CF57_RS14255 PF00419 Fimbrial protein CF57_RS14260 PF00419 Fimbrial protein CF57_RS14265 PF00419 Fimbrial protein CF57_RS14270 PF13954 PapC N-terminal domain CF57_RS14270 PF00577 Outer membrane usher protein CF57_RS14270 PF13953 PapC C-terminal domain CF57_RS14275 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF57_RS14275 PF02753 Pili assembly chaperone PapD, C-terminal domain CF57_RS14280 PF00419 Fimbrial protein CF57_RS14285 PF03358 NADPH-dependent FMN reductase CF57_RS14290 PF09084 NMT1/THI5 like CF57_RS14295 PF00296 Luciferase-like monooxygenase CF57_RS14300 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS14305 PF00005 ABC transporter CF57_RS14310 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CF57_RS14310 PF01433 Peptidase family M1 domain CF57_RS14310 PF11940 Domain of unknown function (DUF3458) Ig-like fold CF57_RS14315 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CF57_RS14315 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CF57_RS14320 PF00152 tRNA synthetases class II (D, K and N) CF57_RS14320 PF01336 OB-fold nucleic acid binding domain CF57_RS14325 PF00267 Gram-negative porin CF57_RS14335 PF00155 Aminotransferase class I and II CF57_RS14340 PF00753 Metallo-beta-lactamase superfamily CF57_RS14345 PF05951 Bacterial protein of unknown function (DUF882) CF57_RS14350 PF01471 Putative peptidoglycan binding domain CF57_RS14350 PF03734 L,D-transpeptidase catalytic domain CF57_RS14355 PF16330 MukB hinge domain CF57_RS14355 PF04310 MukB N-terminal CF57_RS14360 PF04288 MukE-like family CF57_RS14365 PF03882 MukF winged-helix domain CF57_RS14365 PF17192 MukF middle domain CF57_RS14365 PF17193 MukF C-terminal domain CF57_RS14370 PF13847 Methyltransferase domain CF57_RS14375 PF02698 DUF218 domain CF57_RS14380 PF01636 Phosphotransferase enzyme family CF57_RS14385 PF02348 Cytidylyltransferase CF57_RS14390 PF03966 Trm112p-like protein CF57_RS14395 PF06224 Winged helix DNA-binding domain CF57_RS14400 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CF57_RS14405 PF00005 ABC transporter CF57_RS14405 PF00664 ABC transporter transmembrane region CF57_RS14410 PF03772 Competence protein CF57_RS14410 PF00753 Metallo-beta-lactamase superfamily CF57_RS14415 PF00216 Bacterial DNA-binding protein CF57_RS14420 PF00575 S1 RNA binding domain CF57_RS14425 PF02224 Cytidylate kinase CF57_RS14430 PF01435 Peptidase family M48 CF57_RS14435 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CF57_RS14440 PF00266 Aminotransferase class-V CF57_RS14445 PF04239 Protein of unknown function (DUF421) CF57_RS14450 PF18381 YcaO cyclodehydratase C-terminal domain CF57_RS14450 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CF57_RS14455 PF01226 Formate/nitrite transporter CF57_RS14460 PF01228 Glycine radical CF57_RS14460 PF02901 Pyruvate formate lyase-like CF57_RS14465 PF04055 Radical SAM superfamily CF57_RS14470 PF02525 Flavodoxin-like fold CF57_RS14475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS14475 PF03466 LysR substrate binding domain CF57_RS14480 PF13520 Amino acid permease CF57_RS14485 PF07690 Major Facilitator Superfamily CF57_RS14490 PF00857 Isochorismatase family CF57_RS14495 PF04976 DMSO reductase anchor subunit (DmsC) CF57_RS14500 PF13247 4Fe-4S dicluster domain CF57_RS14500 PF12800 4Fe-4S binding domain CF57_RS14505 PF01568 Molydopterin dinucleotide binding domain CF57_RS14505 PF00384 Molybdopterin oxidoreductase CF57_RS14505 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF57_RS14510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CF57_RS14510 PF02403 Seryl-tRNA synthetase N-terminal domain CF57_RS14515 PF00004 ATPase family associated with various cellular activities (AAA) CF57_RS14515 PF12002 MgsA AAA+ ATPase C terminal CF57_RS14515 PF16193 AAA C-terminal domain CF57_RS14520 PF03548 Outer membrane lipoprotein carrier protein LolA CF57_RS14525 PF01580 FtsK/SpoIIIE family CF57_RS14525 PF09397 Ftsk gamma domain CF57_RS14525 PF17854 FtsK alpha domain CF57_RS14525 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CF57_RS14530 PF01037 Lrp/AsnC ligand binding domain CF57_RS14535 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF57_RS14540 PF00664 ABC transporter transmembrane region CF57_RS14540 PF00005 ABC transporter CF57_RS14545 PF00664 ABC transporter transmembrane region CF57_RS14545 PF00005 ABC transporter CF57_RS14550 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CF57_RS14555 PF01176 Translation initiation factor 1A / IF-1 CF57_RS14565 PF10431 C-terminal, D2-small domain, of ClpB protein CF57_RS14565 PF07724 AAA domain (Cdc48 subfamily) CF57_RS14565 PF17871 AAA lid domain CF57_RS14565 PF02861 Clp amino terminal domain, pathogenicity island component CF57_RS14565 PF00004 ATPase family associated with various cellular activities (AAA) CF57_RS14570 PF02617 ATP-dependent Clp protease adaptor protein ClpS CF57_RS14575 PF00313 'Cold-shock' DNA-binding domain CF57_RS14580 PF00005 ABC transporter CF57_RS14580 PF02687 FtsX-like permease family CF57_RS14580 PF12704 MacB-like periplasmic core domain CF57_RS14585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF57_RS14590 PF04393 Protein of unknown function (DUF535) CF57_RS14595 PF11398 Protein of unknown function (DUF2813) CF57_RS14610 PF03956 Lysine exporter LysO CF57_RS14615 PF03063 Prismane/CO dehydrogenase family CF57_RS14620 PF00970 Oxidoreductase FAD-binding domain CF57_RS14620 PF00111 2Fe-2S iron-sulfur cluster binding domain CF57_RS14620 PF00175 Oxidoreductase NAD-binding domain CF57_RS14625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CF57_RS14625 PF00205 Thiamine pyrophosphate enzyme, central domain CF57_RS14625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CF57_RS14630 PF01212 Beta-eliminating lyase CF57_RS14635 PF11066 Protein of unknown function (DUF2867) CF57_RS14635 PF13460 NAD(P)H-binding CF57_RS14640 PF01370 NAD dependent epimerase/dehydratase family CF57_RS14645 PF01510 N-acetylmuramoyl-L-alanine amidase CF57_RS14650 PF01906 Putative heavy-metal-binding CF57_RS14655 PF12883 Protein of unknown function (DUF3828) CF57_RS14660 PF00005 ABC transporter CF57_RS14665 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF57_RS14670 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS14675 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS14680 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF57_RS14685 PF05958 tRNA (Uracil-5-)-methyltransferase CF57_RS14690 PF10767 Protein of unknown function (DUF2593) CF57_RS14695 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS14700 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS14705 PF08402 TOBE domain CF57_RS14705 PF00005 ABC transporter CF57_RS14710 PF13416 Bacterial extracellular solute-binding protein CF57_RS14720 PF10722 Putative bacterial sensory transduction regulator CF57_RS14725 PF18030 RimK PreATP-grasp domain CF57_RS14725 PF08443 RimK-like ATP-grasp domain CF57_RS14730 PF03400 IS1 transposase CF57_RS14735 PF00881 Nitroreductase family CF57_RS14740 PF07214 Protein of unknown function (DUF1418) CF57_RS14745 PF00462 Glutaredoxin CF57_RS14750 PF11045 Putative inner membrane protein of Enterobacteriaceae CF57_RS14755 PF06826 Predicted Permease Membrane Region CF57_RS14755 PF02080 TrkA-C domain CF57_RS14760 PF00440 Bacterial regulatory proteins, tetR family CF57_RS14765 PF07690 Major Facilitator Superfamily CF57_RS14780 PF07690 Major Facilitator Superfamily CF57_RS14785 PF01569 PAP2 superfamily CF57_RS14790 PF08220 DeoR-like helix-turn-helix domain CF57_RS14790 PF00455 DeoR C terminal sensor domain CF57_RS14795 PF07943 Penicillin-binding protein 5, C-terminal domain CF57_RS14795 PF00768 D-alanyl-D-alanine carboxypeptidase CF57_RS14800 PF00043 Glutathione S-transferase, C-terminal domain CF57_RS14800 PF13417 Glutathione S-transferase, N-terminal domain CF57_RS14810 PF10799 Biofilm formation protein (YliH/bssR) CF57_RS14815 PF04055 Radical SAM superfamily CF57_RS14815 PF18693 TRAM domain CF57_RS14815 PF00919 Uncharacterized protein family UPF0004 CF57_RS14820 PF17156 Gammaproteobacterial periplasmic sensor domain CF57_RS14820 PF00990 Diguanylate cyclase, GGDEF domain CF57_RS14825 PF00563 EAL domain CF57_RS14825 PF17153 Periplasmic sensor domain, extracellular CF57_RS14830 PF12911 N-terminal TM domain of oligopeptide transport permease C CF57_RS14830 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS14835 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS14840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF57_RS14845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF57_RS14845 PF00005 ABC transporter CF57_RS14850 PF01112 Asparaginase CF57_RS14855 PF00994 Probable molybdopterin binding domain CF57_RS14855 PF03454 MoeA C-terminal region (domain IV) CF57_RS14855 PF03453 MoeA N-terminal region (domain I and II) CF57_RS14860 PF00899 ThiF family CF57_RS14865 PF00923 Transaldolase/Fructose-6-phosphate aldolase CF57_RS14870 PF04055 Radical SAM superfamily CF57_RS14875 PF01228 Glycine radical CF57_RS14875 PF02901 Pyruvate formate lyase-like CF57_RS14885 PF07350 Protein of unknown function (DUF1479) CF57_RS14890 PF12848 ABC transporter CF57_RS14890 PF00005 ABC transporter CF57_RS14895 PF17969 L,D-transpeptidase C-terminal domain CF57_RS14895 PF03734 L,D-transpeptidase catalytic domain CF57_RS14900 PF03600 Citrate transporter CF57_RS14905 PF02742 Iron dependent repressor, metal binding and dimerisation domain CF57_RS14905 PF01325 Iron dependent repressor, N-terminal DNA binding domain CF57_RS14915 PF00884 Sulfatase CF57_RS14920 PF13505 Outer membrane protein beta-barrel domain CF57_RS14925 PF00892 EamA-like transporter family CF57_RS14930 PF00210 Ferritin-like domain CF57_RS14940 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF57_RS14945 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS14950 PF00005 ABC transporter CF57_RS14955 PF00924 Mechanosensitive ion channel CF57_RS14960 PF05971 RNA methyltransferase CF57_RS14965 PF07338 Protein of unknown function (DUF1471) CF57_RS14970 PF00593 TonB dependent receptor CF57_RS14970 PF07715 TonB-dependent Receptor Plug Domain CF57_RS14975 PF18331 PKHD-type hydroxylase C-terminal domain CF57_RS14975 PF13640 2OG-Fe(II) oxygenase superfamily CF57_RS14980 PF01258 Prokaryotic dksA/traR C4-type zinc finger CF57_RS14985 PF07338 Protein of unknown function (DUF1471) CF57_RS14990 PF02615 Malate/L-lactate dehydrogenase CF57_RS14995 PF02885 Glycosyl transferase family, helical bundle domain CF57_RS15000 PF00270 DEAD/DEAH box helicase CF57_RS15000 PF06733 DEAD_2 CF57_RS15000 PF13307 Helicase C-terminal domain CF57_RS15005 PF08719 Domain of unknown function (DUF1768) CF57_RS15010 PF00271 Helicase conserved C-terminal domain CF57_RS15010 PF00270 DEAD/DEAH box helicase CF57_RS15015 PF00440 Bacterial regulatory proteins, tetR family CF57_RS15015 PF09209 Tetracyclin repressor-like, C-terminal domain CF57_RS15020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF57_RS15025 PF00005 ABC transporter CF57_RS15040 PF11076 Putative inner membrane protein YbhQ CF57_RS15045 PF03372 Endonuclease/Exonuclease/phosphatase family CF57_RS15050 PF13091 PLD-like domain CF57_RS15055 PF03706 Lysylphosphatidylglycerol synthase TM region CF57_RS15060 PF01027 Inhibitor of apoptosis-promoting Bax1 CF57_RS15065 PF01027 Inhibitor of apoptosis-promoting Bax1 CF57_RS15070 PF02391 MoaE protein CF57_RS15075 PF02597 ThiS family CF57_RS15080 PF01967 MoaC family CF57_RS15085 PF00994 Probable molybdopterin binding domain CF57_RS15090 PF06463 Molybdenum Cofactor Synthesis C CF57_RS15090 PF04055 Radical SAM superfamily CF57_RS15100 PF01933 Uncharacterised protein family UPF0052 CF57_RS15105 PF12344 Ultra-violet resistance protein B CF57_RS15105 PF17757 UvrB interaction domain CF57_RS15105 PF02151 UvrB/uvrC motif CF57_RS15105 PF00271 Helicase conserved C-terminal domain CF57_RS15105 PF04851 Type III restriction enzyme, res subunit CF57_RS15115 PF08241 Methyltransferase domain CF57_RS15120 PF00155 Aminotransferase class I and II CF57_RS15125 PF06968 Biotin and Thiamin Synthesis associated domain CF57_RS15125 PF04055 Radical SAM superfamily CF57_RS15130 PF00202 Aminotransferase class-III CF57_RS15135 PF01161 Phosphatidylethanolamine-binding protein CF57_RS15145 PF00717 Peptidase S24-like CF57_RS15250 PF00293 NUDIX domain CF57_RS15275 PF03245 Bacteriophage Rz lysis protein CF57_RS15300 PF00149 Calcineurin-like phosphoesterase CF57_RS15335 PF05772 NinB protein CF57_RS15340 PF03796 DnaB-like helicase C terminal domain CF57_RS15340 PF00772 DnaB-like helicase N terminal domain CF57_RS15360 PF01381 Helix-turn-helix CF57_RS15360 PF00717 Peptidase S24-like CF57_RS15410 PF04098 Rad52/22 family double-strand break repair protein CF57_RS15415 PF00436 Single-strand binding protein family CF57_RS15470 PF00589 Phage integrase family CF57_RS15470 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain CF57_RS15475 PF01095 Pectinesterase CF57_RS15480 PF00694 Aconitase C-terminal domain CF57_RS15480 PF00330 Aconitase family (aconitate hydratase) CF57_RS15485 PF00939 Sodium:sulfate symporter transmembrane region CF57_RS15490 PF04303 PrpF protein CF57_RS15495 PF03466 LysR substrate binding domain CF57_RS15495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS15500 PF10282 Lactonase, 7-bladed beta-propeller CF57_RS15510 PF03459 TOBE domain CF57_RS15510 PF00005 ABC transporter CF57_RS15515 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS15525 PF10766 Multidrug efflux pump-associated protein AcrZ CF57_RS15530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS15530 PF03459 TOBE domain CF57_RS15540 PF00005 ABC transporter CF57_RS15545 PF16363 GDP-mannose 4,6 dehydratase CF57_RS15550 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CF57_RS15550 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CF57_RS15555 PF00288 GHMP kinases N terminal domain CF57_RS15555 PF08544 GHMP kinases C terminal CF57_RS15555 PF10509 Galactokinase galactose-binding signature CF57_RS15560 PF01263 Aldose 1-epimerase CF57_RS15565 PF00300 Histidine phosphatase superfamily (branch 1) CF57_RS15570 PF00793 DAHP synthetase I family CF57_RS15580 PF13985 YbgS-like protein CF57_RS15585 PF01545 Cation efflux family CF57_RS15590 PF04973 Nicotinamide mononucleotide transporter CF57_RS15595 PF02445 Quinolinate synthetase A protein CF57_RS15635 PF13174 Tetratricopeptide repeat CF57_RS15635 PF16331 TolA binding protein trimerisation CF57_RS15640 PF00691 OmpA family CF57_RS15645 PF07676 WD40-like Beta Propeller Repeat CF57_RS15645 PF04052 TolB amino-terminal domain CF57_RS15650 PF06519 TolA C-terminal CF57_RS15655 PF02472 Biopolymer transport protein ExbD/TolR CF57_RS15660 PF01618 MotA/TolQ/ExbB proton channel family CF57_RS15665 PF03061 Thioesterase superfamily CF57_RS15670 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CF57_RS15675 PF08173 Membrane bound YbgT-like protein CF57_RS15680 PF02322 Cytochrome bd terminal oxidase subunit II CF57_RS15685 PF01654 Cytochrome bd terminal oxidase subunit I CF57_RS15695 PF09261 Alpha mannosidase middle domain CF57_RS15695 PF07748 Glycosyl hydrolases family 38 C-terminal domain CF57_RS15695 PF01074 Glycosyl hydrolases family 38 N-terminal domain CF57_RS15700 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF57_RS15700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF57_RS15700 PF02378 Phosphotransferase system, EIIC CF57_RS15705 PF00392 Bacterial regulatory proteins, gntR family CF57_RS15705 PF07702 UTRA domain CF57_RS15710 PF00549 CoA-ligase CF57_RS15710 PF02629 CoA binding domain CF57_RS15715 PF08442 ATP-grasp domain CF57_RS15715 PF00549 CoA-ligase CF57_RS15720 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CF57_RS15720 PF00364 Biotin-requiring enzyme CF57_RS15720 PF02817 e3 binding domain CF57_RS15725 PF02779 Transketolase, pyrimidine binding domain CF57_RS15725 PF16078 2-oxoglutarate dehydrogenase N-terminus CF57_RS15725 PF00676 Dehydrogenase E1 component CF57_RS15725 PF16870 2-oxoglutarate dehydrogenase C-terminal CF57_RS15735 PF13085 2Fe-2S iron-sulfur cluster binding domain CF57_RS15740 PF00890 FAD binding domain CF57_RS15740 PF02910 Fumarate reductase flavoprotein C-term CF57_RS15745 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CF57_RS15750 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CF57_RS15760 PF00285 Citrate synthase, C-terminal domain CF57_RS15765 PF00419 Fimbrial protein CF57_RS15770 PF00577 Outer membrane usher protein CF57_RS15770 PF13954 PapC N-terminal domain CF57_RS15770 PF13953 PapC C-terminal domain CF57_RS15775 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF57_RS15775 PF02753 Pili assembly chaperone PapD, C-terminal domain CF57_RS15780 PF00419 Fimbrial protein CF57_RS15785 PF05145 Transition state regulatory protein AbrB CF57_RS15790 PF06827 Zinc finger found in FPG and IleRS CF57_RS15790 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CF57_RS15790 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CF57_RS15795 PF03746 LamB/YcsF family CF57_RS15800 PF02626 Carboxyltransferase domain, subdomain A and B CF57_RS15805 PF02682 Carboxyltransferase domain, subdomain C and D CF57_RS15810 PF01784 NIF3 (NGG1p interacting factor 3) CF57_RS15815 PF00854 POT family CF57_RS15820 PF03441 FAD binding domain of DNA photolyase CF57_RS15820 PF00875 DNA photolyase CF57_RS15825 PF08349 Protein of unknown function (DUF1722) CF57_RS15830 PF13808 DDE_Tnp_1-associated CF57_RS15830 PF01609 Transposase DDE domain CF57_RS15835 PF13808 DDE_Tnp_1-associated CF57_RS15835 PF01609 Transposase DDE domain CF57_RS15840 PF13808 DDE_Tnp_1-associated CF57_RS15850 PF03527 RHS protein CF57_RS15850 PF15606 Bacterial toxin 34 CF57_RS15850 PF05593 RHS Repeat CF57_RS15855 PF10725 Protein of unknown function (DUF2517) CF57_RS15860 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) CF57_RS15865 PF03814 Potassium-transporting ATPase A subunit CF57_RS15875 PF02669 K+-transporting ATPase, c chain CF57_RS15880 PF13493 Domain of unknown function (DUF4118) CF57_RS15880 PF13492 GAF domain CF57_RS15880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS15880 PF00512 His Kinase A (phospho-acceptor) domain CF57_RS15880 PF02702 Osmosensitive K+ channel His kinase sensor domain CF57_RS15885 PF00072 Response regulator receiver domain CF57_RS15885 PF00486 Transcriptional regulatory protein, C terminal CF57_RS15895 PF01276 Orn/Lys/Arg decarboxylase, major domain CF57_RS15895 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CF57_RS15895 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CF57_RS15900 PF13520 Amino acid permease CF57_RS15910 PF10946 Protein of unknown function DUF2625 CF57_RS15920 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CF57_RS15920 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CF57_RS15920 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CF57_RS15920 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CF57_RS15925 PF03925 SeqA protein C-terminal domain CF57_RS15925 PF17206 SeqA protein N-terminal domain CF57_RS15930 PF12697 Alpha/beta hydrolase family CF57_RS15935 PF01402 Ribbon-helix-helix protein, copG family CF57_RS15940 PF00258 Flavodoxin CF57_RS15955 PF01475 Ferric uptake regulator family CF57_RS15960 PF13982 YbfN-like lipoprotein CF57_RS15965 PF03573 outer membrane porin, OprD family CF57_RS15970 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CF57_RS15970 PF00749 tRNA synthetases class I (E and Q), catalytic domain CF57_RS15975 PF00367 phosphotransferase system, EIIB CF57_RS15975 PF02378 Phosphotransferase system, EIIC CF57_RS15975 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CF57_RS15980 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CF57_RS15985 PF01979 Amidohydrolase family CF57_RS15990 PF01047 MarR family CF57_RS15990 PF00480 ROK family CF57_RS15995 PF13344 Haloacid dehalogenase-like hydrolase CF57_RS16000 PF00733 Asparagine synthase CF57_RS16000 PF13537 Glutamine amidotransferase domain CF57_RS16040 PF01494 FAD binding domain CF57_RS16045 PF00919 Uncharacterized protein family UPF0004 CF57_RS16045 PF04055 Radical SAM superfamily CF57_RS16045 PF01938 TRAM domain CF57_RS16050 PF02562 PhoH-like protein CF57_RS16055 PF02130 Uncharacterized protein family UPF0054 CF57_RS16060 PF00571 CBS domain CF57_RS16060 PF03471 Transporter associated domain CF57_RS16065 PF00795 Carbon-nitrogen hydrolase CF57_RS16070 PF01694 Rhomboid family CF57_RS16075 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF57_RS16080 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS16085 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS16090 PF00005 ABC transporter CF57_RS16095 PF01156 Inosine-uridine preferring nucleoside hydrolase CF57_RS16100 PF00012 Hsp70 protein CF57_RS16110 PF06889 Protein of unknown function (DUF1266) CF57_RS16115 PF08238 Sel1 repeat CF57_RS16125 PF06889 Protein of unknown function (DUF1266) CF57_RS16130 PF08238 Sel1 repeat CF57_RS16135 PF07295 Zinc-ribbon containing domain CF57_RS16140 PF00133 tRNA synthetases class I (I, L, M and V) CF57_RS16140 PF08264 Anticodon-binding domain of tRNA CF57_RS16140 PF13603 Leucyl-tRNA synthetase, Domain 2 CF57_RS16145 PF04390 Lipopolysaccharide-assembly CF57_RS16150 PF06144 DNA polymerase III, delta subunit CF57_RS16150 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CF57_RS16155 PF01467 Cytidylyltransferase-like CF57_RS16160 PF00300 Histidine phosphatase superfamily (branch 1) CF57_RS16170 PF02590 Predicted SPOUT methyltransferase CF57_RS16175 PF00905 Penicillin binding protein transpeptidase domain CF57_RS16175 PF03717 Penicillin-binding Protein dimerisation domain CF57_RS16180 PF01098 Cell cycle protein CF57_RS16185 PF03330 Lytic transglycolase CF57_RS16185 PF05036 Sporulation related domain CF57_RS16190 PF07943 Penicillin-binding protein 5, C-terminal domain CF57_RS16190 PF00768 D-alanyl-D-alanine carboxypeptidase CF57_RS16195 PF04359 Protein of unknown function (DUF493) CF57_RS16200 PF03099 Biotin/lipoate A/B protein ligase family CF57_RS16210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS16210 PF03466 LysR substrate binding domain CF57_RS16215 PF04055 Radical SAM superfamily CF57_RS16215 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CF57_RS16220 PF02416 mttA/Hcf106 family CF57_RS16225 PF00795 Carbon-nitrogen hydrolase CF57_RS16230 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CF57_RS16235 PF00313 'Cold-shock' DNA-binding domain CF57_RS16240 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP CF57_RS16245 PF03606 C4-dicarboxylate anaerobic carrier CF57_RS16250 PF12431 Transcriptional regulator CF57_RS16250 PF00072 Response regulator receiver domain CF57_RS16255 PF17203 Single cache domain 3 CF57_RS16255 PF00989 PAS fold CF57_RS16255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS16255 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CF57_RS16260 PF08218 Citrate lyase ligase C-terminal domain CF57_RS16265 PF06857 Malonate decarboxylase delta subunit (MdcD) CF57_RS16270 PF03328 HpcH/HpaI aldolase/citrate lyase family CF57_RS16275 PF04223 Citrate lyase, alpha subunit (CitF) CF57_RS16280 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CF57_RS16285 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CF57_RS16290 PF00939 Sodium:sulfate symporter transmembrane region CF57_RS16295 PF00445 Ribonuclease T2 family CF57_RS16300 PF14760 Rnk N-terminus CF57_RS16300 PF01272 Transcription elongation factor, GreA/GreB, C-term CF57_RS16310 PF08240 Alcohol dehydrogenase GroES-like domain CF57_RS16310 PF13823 Alcohol dehydrogenase GroES-associated CF57_RS16310 PF00107 Zinc-binding dehydrogenase CF57_RS16315 PF00582 Universal stress protein family CF57_RS16320 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF57_RS16320 PF13192 Thioredoxin domain CF57_RS16325 PF10417 C-terminal domain of 1-Cys peroxiredoxin CF57_RS16325 PF00578 AhpC/TSA family CF57_RS16330 PF13098 Thioredoxin-like domain CF57_RS16335 PF03466 LysR substrate binding domain CF57_RS16335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS16340 PF11922 Domain of unknown function (DUF3440) CF57_RS16340 PF01507 Phosphoadenosine phosphosulfate reductase family CF57_RS16345 PF02195 ParB-like nuclease domain CF57_RS16350 PF00155 Aminotransferase class I and II CF57_RS16355 PF00465 Iron-containing alcohol dehydrogenase CF57_RS16360 PF04328 Selenoprotein, putative CF57_RS16365 PF13722 5TM C-terminal transporter carbon starvation CstA CF57_RS16365 PF02554 Carbon starvation protein CstA CF57_RS16370 PF03061 Thioesterase superfamily CF57_RS16380 PF00550 Phosphopantetheine attachment site CF57_RS16380 PF00857 Isochorismatase family CF57_RS16385 PF13193 AMP-binding enzyme C-terminal domain CF57_RS16385 PF00501 AMP-binding enzyme CF57_RS16390 PF00425 chorismate binding enzyme CF57_RS16395 PF01497 Periplasmic binding protein CF57_RS16400 PF05977 Transmembrane secretion effector CF57_RS16405 PF01032 FecCD transport family CF57_RS16410 PF01032 FecCD transport family CF57_RS16415 PF00005 ABC transporter CF57_RS16420 PF02706 Chain length determinant protein CF57_RS16425 PF00501 AMP-binding enzyme CF57_RS16425 PF13193 AMP-binding enzyme C-terminal domain CF57_RS16425 PF00668 Condensation domain CF57_RS16425 PF00550 Phosphopantetheine attachment site CF57_RS16425 PF00975 Thioesterase domain CF57_RS16430 PF03621 MbtH-like protein CF57_RS16435 PF00756 Putative esterase CF57_RS16435 PF11806 Domain of unknown function (DUF3327) CF57_RS16440 PF00593 TonB dependent receptor CF57_RS16440 PF07715 TonB-dependent Receptor Plug Domain CF57_RS16445 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CF57_RS16445 PF01648 4'-phosphopantetheinyl transferase superfamily CF57_RS16450 PF01609 Transposase DDE domain CF57_RS16455 PF01848 Hok/gef family CF57_RS16465 PF04107 Glutamate-cysteine ligase family 2(GCS2) CF57_RS16470 PF06643 Protein of unknown function (DUF1158) CF57_RS16475 PF04237 YjbR CF57_RS16480 PF00881 Nitroreductase family CF57_RS16485 PF03400 IS1 transposase CF57_RS16490 PF00924 Mechanosensitive ion channel CF57_RS16495 PF00324 Amino acid permease CF57_RS16500 PF00873 AcrB/AcrD/AcrF family CF57_RS16505 PF00529 HlyD membrane-fusion protein of T1SS CF57_RS16505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF57_RS16510 PF11604 Copper binding periplasmic protein CusF CF57_RS16515 PF02321 Outer membrane efflux protein CF57_RS16520 PF00486 Transcriptional regulatory protein, C terminal CF57_RS16520 PF00072 Response regulator receiver domain CF57_RS16525 PF00512 His Kinase A (phospho-acceptor) domain CF57_RS16525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS16525 PF00672 HAMP domain CF57_RS16530 PF04717 Type VI secretion system, phage-baseplate injector CF57_RS16540 PF05488 PAAR motif CF57_RS16540 PF05593 RHS Repeat CF57_RS16560 PF01609 Transposase DDE domain CF57_RS16560 PF13808 DDE_Tnp_1-associated CF57_RS16570 PF13283 Bacteriophage N adsorption protein A C-term CF57_RS16575 PF14488 Domain of unknown function (DUF4434) CF57_RS16580 PF12833 Helix-turn-helix domain CF57_RS16590 PF00072 Response regulator receiver domain CF57_RS16590 PF00196 Bacterial regulatory proteins, luxR family CF57_RS16595 PF00419 Fimbrial protein CF57_RS16600 PF00419 Fimbrial protein CF57_RS16605 PF13953 PapC C-terminal domain CF57_RS16605 PF13954 PapC N-terminal domain CF57_RS16605 PF00577 Outer membrane usher protein CF57_RS16610 PF02753 Pili assembly chaperone PapD, C-terminal domain CF57_RS16610 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF57_RS16615 PF00419 Fimbrial protein CF57_RS16620 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CF57_RS16620 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CF57_RS16630 PF04307 LexA-binding, inner membrane-associated putative hydrolase CF57_RS16635 PF01406 tRNA synthetases class I (C) catalytic domain CF57_RS16635 PF09190 DALR domain CF57_RS16640 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CF57_RS16645 PF12850 Calcineurin-like phosphoesterase superfamily domain CF57_RS16650 PF00731 AIR carboxylase CF57_RS16655 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CF57_RS16655 PF02222 ATP-grasp domain CF57_RS16660 PF00696 Amino acid kinase family CF57_RS16665 PF11392 Protein of unknown function (DUF2877) CF57_RS16670 PF06545 Protein of unknown function (DUF1116) CF57_RS16675 PF00549 CoA-ligase CF57_RS16675 PF02629 CoA binding domain CF57_RS16680 PF02615 Malate/L-lactate dehydrogenase CF57_RS16685 PF01546 Peptidase family M20/M25/M40 CF57_RS16690 PF05899 Protein of unknown function (DUF861) CF57_RS16690 PF07883 Cupin domain CF57_RS16695 PF02595 Glycerate kinase family CF57_RS16700 PF00860 Permease family CF57_RS16705 PF01979 Amidohydrolase family CF57_RS16710 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CF57_RS16715 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CF57_RS16715 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CF57_RS16720 PF01261 Xylose isomerase-like TIM barrel CF57_RS16725 PF00205 Thiamine pyrophosphate enzyme, central domain CF57_RS16725 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CF57_RS16725 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CF57_RS16730 PF09339 IclR helix-turn-helix domain CF57_RS16730 PF01614 Bacterial transcriptional regulator CF57_RS16735 PF04115 Ureidoglycolate lyase CF57_RS16740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS16740 PF03466 LysR substrate binding domain CF57_RS16755 PF00005 ABC transporter CF57_RS16760 PF13472 GDSL-like Lipase/Acylhydrolase family CF57_RS16765 PF00106 short chain dehydrogenase CF57_RS16770 PF00085 Thioredoxin CF57_RS16775 PF03649 Uncharacterised protein family (UPF0014) CF57_RS16780 PF00005 ABC transporter CF57_RS16785 PF16200 C-terminal region of band_7 CF57_RS16785 PF01145 SPFH domain / Band 7 family CF57_RS16790 PF01957 NfeD-like C-terminal, partner-binding CF57_RS16795 PF13411 MerR HTH family regulatory protein CF57_RS16800 PF13520 Amino acid permease CF57_RS16805 PF04960 Glutaminase CF57_RS16810 PF00403 Heavy-metal-associated domain CF57_RS16815 PF01381 Helix-turn-helix CF57_RS16820 PF01963 TraB family CF57_RS16825 PF04073 Aminoacyl-tRNA editing domain CF57_RS16830 PF02872 5'-nucleotidase, C-terminal domain CF57_RS16830 PF00149 Calcineurin-like phosphoesterase CF57_RS16835 PF07690 Major Facilitator Superfamily CF57_RS16840 PF02254 TrkA-N domain CF57_RS16840 PF00999 Sodium/hydrogen exchanger family CF57_RS16845 PF00294 pfkB family carbohydrate kinase CF57_RS16850 PF07859 alpha/beta hydrolase fold CF57_RS16855 PF00762 Ferrochelatase CF57_RS16860 PF05191 Adenylate kinase, active site lid CF57_RS16865 PF00183 Hsp90 protein CF57_RS16865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS16870 PF02132 RecR protein CF57_RS16870 PF13662 Toprim domain CF57_RS16875 PF02575 YbaB/EbfC DNA-binding family CF57_RS16880 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CF57_RS16880 PF12169 DNA polymerase III subunits gamma and tau domain III CF57_RS16880 PF12170 DNA polymerase III tau subunit V interacting with alpha CF57_RS16885 PF00156 Phosphoribosyl transferase domain CF57_RS16890 PF04304 Protein of unknown function (DUF454) CF57_RS16895 PF07445 Primosomal replication protein priC CF57_RS16900 PF10689 Protein of unknown function (DUF2496) CF57_RS16910 PF00924 Mechanosensitive ion channel CF57_RS16910 PF12795 Mechanosensitive ion channel porin domain CF57_RS16910 PF12794 Mechanosensitive ion channel inner membrane domain 1 CF57_RS16915 PF08361 MAATS-type transcriptional repressor, C-terminal region CF57_RS16915 PF00440 Bacterial regulatory proteins, tetR family CF57_RS16920 PF00529 HlyD membrane-fusion protein of T1SS CF57_RS16920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF57_RS16925 PF00873 AcrB/AcrD/AcrF family CF57_RS16930 PF10757 Biofilm formation regulator YbaJ CF57_RS16935 PF05321 Haemolysin expression modulating protein CF57_RS16940 PF12464 Maltose acetyltransferase CF57_RS16940 PF14602 Hexapeptide repeat of succinyl-transferase CF57_RS16945 PF10777 Inner membrane protein YlaC CF57_RS16950 PF12792 CSS motif domain associated with EAL CF57_RS16950 PF00563 EAL domain CF57_RS16955 PF07237 Protein of unknown function (DUF1428) CF57_RS16960 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CF57_RS16965 PF09619 Type III secretion system lipoprotein chaperone (YscW) CF57_RS16975 PF00909 Ammonium Transporter Family CF57_RS16980 PF00543 Nitrogen regulatory protein P-II CF57_RS16985 PF00664 ABC transporter transmembrane region CF57_RS16985 PF00005 ABC transporter CF57_RS16990 PF00005 ABC transporter CF57_RS16990 PF00664 ABC transporter transmembrane region CF57_RS16995 PF13404 AsnC-type helix-turn-helix domain CF57_RS16995 PF01037 Lrp/AsnC ligand binding domain CF57_RS17005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF57_RS17005 PF12793 Sugar transport-related sRNA regulator N-term CF57_RS17010 PF06508 Queuosine biosynthesis protein QueC CF57_RS17025 PF13145 PPIC-type PPIASE domain CF57_RS17030 PF00216 Bacterial DNA-binding protein CF57_RS17035 PF00004 ATPase family associated with various cellular activities (AAA) CF57_RS17035 PF05362 Lon protease (S16) C-terminal proteolytic domain CF57_RS17035 PF02190 ATP-dependent protease La (LON) substrate-binding domain CF57_RS17040 PF07724 AAA domain (Cdc48 subfamily) CF57_RS17040 PF10431 C-terminal, D2-small domain, of ClpB protein CF57_RS17040 PF06689 ClpX C4-type zinc finger CF57_RS17045 PF00574 Clp protease CF57_RS17050 PF05697 Bacterial trigger factor protein (TF) CF57_RS17050 PF05698 Bacterial trigger factor protein (TF) C-terminus CF57_RS17050 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CF57_RS17060 PF01722 BolA-like protein CF57_RS17065 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CF57_RS17065 PF03923 Uncharacterized lipoprotein CF57_RS17070 PF07690 Major Facilitator Superfamily CF57_RS17075 PF06481 COX Aromatic Rich Motif CF57_RS17075 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CF57_RS17080 PF00115 Cytochrome C and Quinol oxidase polypeptide I CF57_RS17085 PF00510 Cytochrome c oxidase subunit III CF57_RS17090 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CF57_RS17095 PF01040 UbiA prenyltransferase family CF57_RS17100 PF07690 Major Facilitator Superfamily CF57_RS17105 PF04461 Protein of unknown function (DUF520) CF57_RS17110 PF02558 Ketopantoate reductase PanE/ApbA CF57_RS17110 PF08546 Ketopantoate reductase PanE/ApbA C terminal CF57_RS17115 PF01965 DJ-1/PfpI family CF57_RS17120 PF02926 THUMP domain CF57_RS17120 PF02568 Thiamine biosynthesis protein (ThiI) CF57_RS17125 PF02609 Exonuclease VII small subunit CF57_RS17130 PF00348 Polyprenyl synthetase CF57_RS17135 PF02779 Transketolase, pyrimidine binding domain CF57_RS17135 PF02780 Transketolase, C-terminal domain CF57_RS17135 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CF57_RS17140 PF00248 Aldo/keto reductase family CF57_RS17145 PF04608 Phosphatidylglycerophosphatase A CF57_RS17150 PF00586 AIR synthase related protein, N-terminal domain CF57_RS17150 PF02769 AIR synthase related protein, C-terminal domain CF57_RS17155 PF01029 NusB family CF57_RS17160 PF00885 6,7-dimethyl-8-ribityllumazine synthase CF57_RS17165 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CF57_RS17165 PF01872 RibD C-terminal domain CF57_RS17170 PF03477 ATP cone domain CF57_RS17175 PF11622 Protein of unknown function (DUF3251) CF57_RS17180 PF03502 Nucleoside-specific channel-forming protein, Tsx CF57_RS17190 PF01844 HNH endonuclease CF57_RS17195 PF02355 Protein export membrane protein CF57_RS17195 PF07549 SecD/SecF GG Motif CF57_RS17200 PF02355 Protein export membrane protein CF57_RS17200 PF07549 SecD/SecF GG Motif CF57_RS17200 PF13721 SecD export protein N-terminal TM region CF57_RS17205 PF02699 Preprotein translocase subunit CF57_RS17210 PF01702 Queuine tRNA-ribosyltransferase CF57_RS17215 PF02547 Queuosine biosynthesis protein CF57_RS17220 PF04336 Acyl carrier protein phosphodiesterase CF57_RS17225 PF02903 Alpha amylase, N-terminal ig-like domain CF57_RS17225 PF00128 Alpha amylase, catalytic domain CF57_RS17230 PF00324 Amino acid permease CF57_RS17235 PF05525 Branched-chain amino acid transport protein CF57_RS17240 PF00512 His Kinase A (phospho-acceptor) domain CF57_RS17240 PF00989 PAS fold CF57_RS17240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS17240 PF11808 Phosphate regulon sensor protein PhoR CF57_RS17245 PF00486 Transcriptional regulatory protein, C terminal CF57_RS17245 PF00072 Response regulator receiver domain CF57_RS17250 PF00149 Calcineurin-like phosphoesterase CF57_RS17250 PF12320 Type 5 capsule protein repressor C-terminal domain CF57_RS17255 PF13476 AAA domain CF57_RS17260 PF07690 Major Facilitator Superfamily CF57_RS17265 PF00480 ROK family CF57_RS17270 PF04381 Putative exonuclease, RdgC CF57_RS17275 PF10971 Protein of unknown function (DUF2773) CF57_RS17280 PF06865 Pyrimidine/purine nucleoside phosphorylase CF57_RS17285 PF07302 AroM protein CF57_RS17295 PF16362 YaiA protein CF57_RS17300 PF01202 Shikimate kinase CF57_RS17305 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CF57_RS17310 PF03807 NADP oxidoreductase coenzyme F420-dependent CF57_RS17310 PF14748 Pyrroline-5-carboxylate reductase dimerisation CF57_RS17315 PF00990 Diguanylate cyclase, GGDEF domain CF57_RS17315 PF05230 MASE2 domain CF57_RS17320 PF07769 psiF repeat CF57_RS17325 PF00245 Alkaline phosphatase CF57_RS17330 PF10796 Sigma-S stabilisation anti-adaptor protein CF57_RS17340 PF01820 D-ala D-ala ligase N-terminus CF57_RS17340 PF07478 D-ala D-ala ligase C-terminus CF57_RS17345 PF10953 Protein of unknown function (DUF2754) CF57_RS17350 PF10954 Protein of unknown function (DUF2755) CF57_RS17355 PF07759 Protein of unknown function (DUF1615) CF57_RS17360 PF05992 SbmA/BacA-like family CF57_RS17370 PF00144 Beta-lactamase CF57_RS17375 PF15977 Winged helix-turn-helix DNA binding CF57_RS17380 PF03797 Autotransporter beta-domain CF57_RS17380 PF03212 Pertactin CF57_RS17385 PF00490 Delta-aminolevulinic acid dehydratase CF57_RS17390 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CF57_RS17395 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS17400 PF00005 ABC transporter CF57_RS17405 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CF57_RS17410 PF02585 GlcNAc-PI de-N-acetylase CF57_RS17415 PF00535 Glycosyl transferase family 2 CF57_RS17420 PF00132 Bacterial transferase hexapeptide (six repeats) CF57_RS17430 PF02583 Metal-sensitive transcriptional repressor CF57_RS17435 PF00107 Zinc-binding dehydrogenase CF57_RS17435 PF08240 Alcohol dehydrogenase GroES-like domain CF57_RS17440 PF00756 Putative esterase CF57_RS17445 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CF57_RS17450 PF07690 Major Facilitator Superfamily CF57_RS17455 PF07836 DmpG-like communication domain CF57_RS17455 PF00682 HMGL-like CF57_RS17460 PF01118 Semialdehyde dehydrogenase, NAD binding domain CF57_RS17460 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation CF57_RS17465 PF01557 Fumarylacetoacetate (FAA) hydrolase family CF57_RS17470 PF12697 Alpha/beta hydrolase family CF57_RS17475 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CF57_RS17480 PF01494 FAD binding domain CF57_RS17485 PF01614 Bacterial transcriptional regulator CF57_RS17485 PF09339 IclR helix-turn-helix domain CF57_RS17490 PF00356 Bacterial regulatory proteins, lacI family CF57_RS17495 PF02837 Glycosyl hydrolases family 2, sugar binding domain CF57_RS17495 PF02929 Beta galactosidase small chain CF57_RS17495 PF00703 Glycosyl hydrolases family 2 CF57_RS17495 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CF57_RS17495 PF16353 Domain of unknown function(DUF4981) CF57_RS17500 PF01306 LacY proton/sugar symporter CF57_RS17505 PF00132 Bacterial transferase hexapeptide (six repeats) CF57_RS17505 PF12464 Maltose acetyltransferase CF57_RS17510 PF07690 Major Facilitator Superfamily CF57_RS17515 PF02560 Cyanate lyase C-terminal domain CF57_RS17520 PF00484 Carbonic anhydrase CF57_RS17525 PF03466 LysR substrate binding domain CF57_RS17525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS17530 PF07969 Amidohydrolase family CF57_RS17535 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CF57_RS17540 PF16177 Acetyl-coenzyme A synthetase N-terminus CF57_RS17540 PF13193 AMP-binding enzyme C-terminal domain CF57_RS17540 PF00501 AMP-binding enzyme CF57_RS17545 PF03972 MmgE/PrpD family CF57_RS17550 PF00285 Citrate synthase, C-terminal domain CF57_RS17560 PF06506 Propionate catabolism activator CF57_RS17560 PF00158 Sigma-54 interaction domain CF57_RS17560 PF02954 Bacterial regulatory protein, Fis family CF57_RS17565 PF07338 Protein of unknown function (DUF1471) CF57_RS17570 PF01810 LysE type translocator CF57_RS17585 PF00107 Zinc-binding dehydrogenase CF57_RS17585 PF08240 Alcohol dehydrogenase GroES-like domain CF57_RS17590 PF07969 Amidohydrolase family CF57_RS17595 PF00696 Amino acid kinase family CF57_RS17605 PF06545 Protein of unknown function (DUF1116) CF57_RS17610 PF02629 CoA binding domain CF57_RS17610 PF00549 CoA-ligase CF57_RS17615 PF11392 Protein of unknown function (DUF2877) CF57_RS17620 PF12796 Ankyrin repeats (3 copies) CF57_RS17625 PF06496 Protein of unknown function (DUF1097) CF57_RS17630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS17630 PF03466 LysR substrate binding domain CF57_RS17635 PF00563 EAL domain CF57_RS17635 PF00196 Bacterial regulatory proteins, luxR family CF57_RS17645 PF02028 BCCT, betaine/carnitine/choline family transporter CF57_RS17650 PF13977 BetI-type transcriptional repressor, C-terminal CF57_RS17650 PF00440 Bacterial regulatory proteins, tetR family CF57_RS17655 PF00171 Aldehyde dehydrogenase family CF57_RS17660 PF00732 GMC oxidoreductase CF57_RS17660 PF05199 GMC oxidoreductase CF57_RS17675 PF02589 LUD domain CF57_RS17680 PF11870 Domain of unknown function (DUF3390) CF57_RS17680 PF13183 4Fe-4S dicluster domain CF57_RS17680 PF02589 LUD domain CF57_RS17685 PF02754 Cysteine-rich domain CF57_RS17690 PF12852 Cupin CF57_RS17690 PF12833 Helix-turn-helix domain CF57_RS17695 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CF57_RS17695 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF57_RS17700 PF07338 Protein of unknown function (DUF1471) CF57_RS17705 PF04224 Protein of unknown function, DUF417 CF57_RS17710 PF12833 Helix-turn-helix domain CF57_RS17715 PF11924 Inverse autotransporter, beta-domain CF57_RS17725 PF01197 Ribosomal protein L31 CF57_RS17730 PF00444 Ribosomal protein L36 CF57_RS17740 PF00196 Bacterial regulatory proteins, luxR family CF57_RS17745 PF16449 Fimbrillin MatB CF57_RS17750 PF18649 EcpB C-terminal domain CF57_RS17755 PF15976 CS1-pili formation C-terminal CF57_RS17755 PF16967 E-set like domain CF57_RS17770 PF03692 Putative zinc- or iron-chelating domain CF57_RS17775 PF07274 Protein of unknown function (DUF1440) CF57_RS17780 PF01799 [2Fe-2S] binding domain CF57_RS17780 PF00111 2Fe-2S iron-sulfur cluster binding domain CF57_RS17785 PF03450 CO dehydrogenase flavoprotein C-terminal domain CF57_RS17785 PF00941 FAD binding domain in molybdopterin dehydrogenase CF57_RS17790 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CF57_RS17790 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CF57_RS17795 PF13478 XdhC Rossmann domain CF57_RS17795 PF02625 XdhC and CoxI family CF57_RS17800 PF03466 LysR substrate binding domain CF57_RS17815 PF03400 IS1 transposase CF57_RS17830 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CF57_RS17840 PF03354 Phage Terminase CF57_RS17855 PF06291 Bor protein CF57_RS17860 PF03245 Bacteriophage Rz lysis protein CF57_RS17875 PF01555 DNA methylase CF57_RS17890 PF06530 Phage antitermination protein Q CF57_RS17895 PF06147 Protein of unknown function (DUF968) CF57_RS17910 PF00717 Peptidase S24-like CF57_RS17910 PF01726 LexA DNA binding domain CF57_RS17915 PF06069 PerC transcriptional activator CF57_RS17940 PF01381 Helix-turn-helix CF57_RS17940 PF00717 Peptidase S24-like CF57_RS17960 PF10065 Uncharacterized conserved protein (DUF2303) CF57_RS17980 PF00589 Phage integrase family CF57_RS17990 PF00171 Aldehyde dehydrogenase family CF57_RS17995 PF00696 Amino acid kinase family CF57_RS17995 PF01472 PUA domain CF57_RS18000 PF00267 Gram-negative porin CF57_RS18005 PF07417 Sigma factor-binding transcriptional regulator Crl CF57_RS18010 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) CF57_RS18015 PF00156 Phosphoribosyl transferase domain CF57_RS18020 PF01546 Peptidase family M20/M25/M40 CF57_RS18020 PF07687 Peptidase dimerisation domain CF57_RS18025 PF00472 RF-1 domain CF57_RS18035 PF13673 Acetyltransferase (GNAT) domain CF57_RS18040 PF13957 Toxin YafO, type II toxin-antitoxin system CF57_RS18050 PF11799 impB/mucB/samB family C-terminal domain CF57_RS18050 PF00817 impB/mucB/samB family CF57_RS18050 PF11798 IMS family HHH motif CF57_RS18055 PF13677 Membrane MotB of proton-channel complex MotA/MotB CF57_RS18055 PF00691 OmpA family CF57_RS18060 PF01618 MotA/TolQ/ExbB proton channel family CF57_RS18065 PF04545 Sigma-70, region 4 CF57_RS18065 PF04542 Sigma-70 region 2 CF57_RS18090 PF02465 Flagellar hook-associated protein 2 N-terminus CF57_RS18090 PF07195 Flagellar hook-associated protein 2 C-terminus CF57_RS18090 PF07196 Flagellin hook IN motif CF57_RS18095 PF00700 Bacterial flagellin C-terminal helical region CF57_RS18095 PF00669 Bacterial flagellin N-terminal helical region CF57_RS18110 PF00669 Bacterial flagellin N-terminal helical region CF57_RS18120 PF10135 Rod binding protein CF57_RS18120 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CF57_RS18125 PF02119 Flagellar P-ring protein CF57_RS18130 PF02107 Flagellar L-ring protein CF57_RS18135 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CF57_RS18135 PF00460 Flagella basal body rod protein CF57_RS18140 PF00460 Flagella basal body rod protein CF57_RS18140 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CF57_RS18145 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CF57_RS18145 PF07559 Flagellar basal body protein FlaE CF57_RS18155 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CF57_RS18155 PF00460 Flagella basal body rod protein CF57_RS18160 PF00460 Flagella basal body rod protein CF57_RS18190 PF01467 Cytidylyltransferase-like CF57_RS18200 PF18269 T3SS EscN ATPase C-terminal domain CF57_RS18200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CF57_RS18210 PF01706 FliG C-terminal domain CF57_RS18210 PF14841 FliG middle domain CF57_RS18210 PF14842 FliG N-terminal domain CF57_RS18215 PF08345 Flagellar M-ring protein C-terminal CF57_RS18215 PF01514 Secretory protein of YscJ/FliF family CF57_RS18220 PF02049 Flagellar hook-basal body complex protein FliE CF57_RS18225 PF00158 Sigma-54 interaction domain CF57_RS18225 PF00072 Response regulator receiver domain CF57_RS18225 PF02954 Bacterial regulatory protein, Fis family CF57_RS18235 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CF57_RS18240 PF00813 FliP family CF57_RS18245 PF01313 Bacterial export proteins, family 3 CF57_RS18250 PF01311 Bacterial export proteins, family 1 CF57_RS18255 PF01312 FlhB HrpN YscU SpaS Family CF57_RS18260 PF00771 FHIPEP family CF57_RS18270 PF00877 NlpC/P60 family CF57_RS18275 PF03734 L,D-transpeptidase catalytic domain CF57_RS18280 PF13230 Glutamine amidotransferases class-II CF57_RS18285 PF13580 SIS domain CF57_RS18290 PF09317 Domain of unknown function (DUF1974) CF57_RS18290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CF57_RS18290 PF02770 Acyl-CoA dehydrogenase, middle domain CF57_RS18290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CF57_RS18300 PF00795 Carbon-nitrogen hydrolase CF57_RS18305 PF01609 Transposase DDE domain CF57_RS18305 PF13808 DDE_Tnp_1-associated CF57_RS18315 PF14220 Domain of unknown function (DUF4329) CF57_RS18315 PF03527 RHS protein CF57_RS18315 PF05593 RHS Repeat CF57_RS18330 PF05638 Type VI secretion system effector, Hcp CF57_RS18355 PF00929 Exonuclease CF57_RS18360 PF00075 RNase H CF57_RS18365 PF08241 Methyltransferase domain CF57_RS18370 PF00753 Metallo-beta-lactamase superfamily CF57_RS18370 PF16123 Hydroxyacylglutathione hydrolase C-terminus CF57_RS18375 PF01476 LysM domain CF57_RS18375 PF01464 Transglycosylase SLT domain CF57_RS18380 PF08241 Methyltransferase domain CF57_RS18385 PF03372 Endonuclease/Exonuclease/phosphatase family CF57_RS18390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS18390 PF03466 LysR substrate binding domain CF57_RS18395 PF00248 Aldo/keto reductase family CF57_RS18435 PF09383 NIL domain CF57_RS18435 PF00005 ABC transporter CF57_RS18440 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS18445 PF03180 NLPA lipoprotein CF57_RS18450 PF16358 RcsF lipoprotein CF57_RS18455 PF01980 tRNA-methyltransferase O CF57_RS18455 PF18389 TrmO C-terminal domain CF57_RS18460 PF03129 Anticodon binding domain CF57_RS18460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CF57_RS18460 PF04073 Aminoacyl-tRNA editing domain CF57_RS18465 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CF57_RS18470 PF04170 NlpE N-terminal domain CF57_RS18470 PF17185 NlpE C-terminal OB domain CF57_RS18475 PF00472 RF-1 domain CF57_RS18480 PF07152 YaeQ protein CF57_RS18485 PF06786 Uncharacterised protein family (UPF0253) CF57_RS18490 PF07073 Modulator of Rho-dependent transcription termination (ROF) CF57_RS18495 PF01171 PP-loop family CF57_RS18495 PF09179 TilS substrate binding domain CF57_RS18495 PF11734 TilS substrate C-terminal domain CF57_RS18500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CF57_RS18505 PF01276 Orn/Lys/Arg decarboxylase, major domain CF57_RS18505 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CF57_RS18505 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CF57_RS18510 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CF57_RS18515 PF01336 OB-fold nucleic acid binding domain CF57_RS18515 PF02811 PHP domain CF57_RS18515 PF07733 Bacterial DNA polymerase III alpha NTPase domain CF57_RS18515 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CF57_RS18515 PF14579 Helix-hairpin-helix motif CF57_RS18520 PF01351 Ribonuclease HII CF57_RS18525 PF02684 Lipid-A-disaccharide synthetase CF57_RS18530 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CF57_RS18530 PF00132 Bacterial transferase hexapeptide (six repeats) CF57_RS18535 PF07977 FabA-like domain CF57_RS18540 PF00132 Bacterial transferase hexapeptide (six repeats) CF57_RS18540 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CF57_RS18545 PF03938 Outer membrane protein (OmpH-like) CF57_RS18550 PF07244 Surface antigen variable number repeat CF57_RS18550 PF01103 Surface antigen CF57_RS18555 PF17820 PDZ domain CF57_RS18555 PF02163 Peptidase family M50 CF57_RS18565 PF01255 Putative undecaprenyl diphosphate synthase CF57_RS18570 PF13288 DXP reductoisomerase C-terminal domain CF57_RS18570 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CF57_RS18570 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CF57_RS18575 PF01765 Ribosome recycling factor CF57_RS18580 PF00696 Amino acid kinase family CF57_RS18585 PF00889 Elongation factor TS CF57_RS18590 PF00318 Ribosomal protein S2 CF57_RS18595 PF00557 Metallopeptidase family M24 CF57_RS18600 PF01842 ACT domain CF57_RS18600 PF08335 GlnD PII-uridylyltransferase CF57_RS18600 PF01966 HD domain CF57_RS18600 PF01909 Nucleotidyltransferase domain CF57_RS18605 PF00132 Bacterial transferase hexapeptide (six repeats) CF57_RS18605 PF14602 Hexapeptide repeat of succinyl-transferase CF57_RS18605 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CF57_RS18610 PF00149 Calcineurin-like phosphoesterase CF57_RS18615 PF11944 Protein of unknown function (DUF3461) CF57_RS18620 PF17853 GGDEF-like domain CF57_RS18620 PF13556 PucR C-terminal helix-turn-helix domain CF57_RS18620 PF05651 Putative sugar diacid recognition CF57_RS18625 PF00595 PDZ domain CF57_RS18630 PF13286 Phosphohydrolase-associated domain CF57_RS18630 PF01966 HD domain CF57_RS18635 PF01048 Phosphorylase superfamily CF57_RS18640 PF01497 Periplasmic binding protein CF57_RS18645 PF03458 UPF0126 domain CF57_RS18650 PF01521 Iron-sulphur cluster biosynthesis CF57_RS18655 PF00654 Voltage gated chloride channel CF57_RS18660 PF00202 Aminotransferase class-III CF57_RS18665 PF01032 FecCD transport family CF57_RS18670 PF01497 Periplasmic binding protein CF57_RS18675 PF00005 ABC transporter CF57_RS18680 PF00593 TonB dependent receptor CF57_RS18680 PF07715 TonB-dependent Receptor Plug Domain CF57_RS18685 PF00912 Transglycosylase CF57_RS18685 PF14814 Bifunctional transglycosylase second domain CF57_RS18685 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal CF57_RS18685 PF00905 Penicillin binding protein transpeptidase domain CF57_RS18695 PF08482 ATP-dependent helicase C-terminal CF57_RS18695 PF00271 Helicase conserved C-terminal domain CF57_RS18695 PF04408 Helicase associated domain (HA2) CF57_RS18695 PF00270 DEAD/DEAH box helicase CF57_RS18700 PF02834 LigT like Phosphoesterase CF57_RS18705 PF03749 Sugar fermentation stimulation protein RE domain CF57_RS18705 PF17746 SfsA N-terminal OB domain CF57_RS18710 PF01258 Prokaryotic dksA/traR C4-type zinc finger CF57_RS18715 PF00749 tRNA synthetases class I (E and Q), catalytic domain CF57_RS18720 PF12627 Probable RNA and SrmB- binding site of polymerase A CF57_RS18720 PF12626 Polymerase A arginine-rich C-terminus CF57_RS18720 PF01743 Poly A polymerase head domain CF57_RS18725 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CF57_RS18730 PF03400 IS1 transposase CF57_RS18735 PF00419 Fimbrial protein CF57_RS18740 PF00419 Fimbrial protein CF57_RS18755 PF02548 Ketopantoate hydroxymethyltransferase CF57_RS18760 PF02569 Pantoate-beta-alanine ligase CF57_RS18765 PF04754 Putative transposase, YhgA-like CF57_RS18770 PF02261 Aspartate decarboxylase CF57_RS18775 PF01522 Polysaccharide deacetylase CF57_RS18780 PF03610 PTS system fructose IIA component CF57_RS18785 PF01061 ABC-2 type transporter CF57_RS18790 PF00005 ABC transporter CF57_RS18795 PF00484 Carbonic anhydrase CF57_RS18800 PF00156 Phosphoribosyl transferase domain CF57_RS18805 PF01011 PQQ enzyme repeat CF57_RS18810 PF00394 Multicopper oxidase CF57_RS18810 PF07731 Multicopper oxidase CF57_RS18810 PF07732 Multicopper oxidase CF57_RS18815 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) CF57_RS18820 PF17284 Spermidine synthase tetramerisation domain CF57_RS18825 PF02675 S-adenosylmethionine decarboxylase CF57_RS18830 PF06062 Uncharacterised protein family (UPF0231) CF57_RS18835 PF11791 Aconitate B N-terminal domain CF57_RS18835 PF00330 Aconitase family (aconitate hydratase) CF57_RS18835 PF06434 Aconitate hydratase 2 N-terminus CF57_RS18840 PF11737 Protein of unknown function (DUF3300) CF57_RS18845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CF57_RS18845 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF57_RS18850 PF02817 e3 binding domain CF57_RS18850 PF00364 Biotin-requiring enzyme CF57_RS18850 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CF57_RS18855 PF00456 Transketolase, thiamine diphosphate binding domain CF57_RS18855 PF17831 Pyruvate dehydrogenase E1 component middle domain CF57_RS18860 PF07729 FCD domain CF57_RS18860 PF00392 Bacterial regulatory proteins, gntR family CF57_RS18865 PF00324 Amino acid permease CF57_RS18870 PF17113 Regulatory signalling modulator protein AmpE CF57_RS18875 PF01510 N-acetylmuramoyl-L-alanine amidase CF57_RS18880 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CF57_RS18880 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CF57_RS18890 PF07963 Prokaryotic N-terminal methylation motif CF57_RS18895 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CF57_RS18895 PF00437 Type II/IV secretion system protein CF57_RS18900 PF00482 Type II secretion system (T2SS), protein F CF57_RS18905 PF00478 IMP dehydrogenase / GMP reductase domain CF57_RS18910 PF01121 Dephospho-CoA kinase CF57_RS18915 PF07072 Cell division protein CF57_RS18920 PF03884 DNA gyrase inhibitor YacG CF57_RS18930 PF00293 NUDIX domain CF57_RS18935 PF01043 SecA preprotein cross-linking domain CF57_RS18935 PF07517 SecA DEAD-like domain CF57_RS18935 PF02810 SEC-C motif CF57_RS18935 PF07516 SecA Wing and Scaffold domain CF57_RS18940 PF06558 Secretion monitor precursor protein (SecM) CF57_RS18945 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CF57_RS18950 PF12327 FtsZ family, C-terminal domain CF57_RS18950 PF00091 Tubulin/FtsZ family, GTPase domain CF57_RS18955 PF02491 SHS2 domain inserted in FTSA CF57_RS18960 PF03799 Cell division protein FtsQ CF57_RS18960 PF08478 POTRA domain, FtsQ-type CF57_RS18965 PF07478 D-ala D-ala ligase C-terminus CF57_RS18965 PF01820 D-ala D-ala ligase N-terminus CF57_RS18970 PF01225 Mur ligase family, catalytic domain CF57_RS18970 PF08245 Mur ligase middle domain CF57_RS18970 PF02875 Mur ligase family, glutamate ligase domain CF57_RS18975 PF04101 Glycosyltransferase family 28 C-terminal domain CF57_RS18975 PF03033 Glycosyltransferase family 28 N-terminal domain CF57_RS18980 PF01098 Cell cycle protein CF57_RS18985 PF08245 Mur ligase middle domain CF57_RS18985 PF02875 Mur ligase family, glutamate ligase domain CF57_RS18990 PF00953 Glycosyl transferase family 4 CF57_RS18990 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CF57_RS18995 PF08245 Mur ligase middle domain CF57_RS18995 PF01225 Mur ligase family, catalytic domain CF57_RS18995 PF02875 Mur ligase family, glutamate ligase domain CF57_RS19000 PF01225 Mur ligase family, catalytic domain CF57_RS19000 PF02875 Mur ligase family, glutamate ligase domain CF57_RS19000 PF08245 Mur ligase middle domain CF57_RS19005 PF03717 Penicillin-binding Protein dimerisation domain CF57_RS19005 PF00905 Penicillin binding protein transpeptidase domain CF57_RS19010 PF04999 Cell division protein FtsL CF57_RS19015 PF01795 MraW methylase family CF57_RS19020 PF02381 MraZ protein, putative antitoxin-like CF57_RS19025 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CF57_RS19025 PF00356 Bacterial regulatory proteins, lacI family CF57_RS19035 PF10369 Small subunit of acetolactate synthase CF57_RS19040 PF00205 Thiamine pyrophosphate enzyme, central domain CF57_RS19040 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CF57_RS19040 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CF57_RS19045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS19045 PF03466 LysR substrate binding domain CF57_RS19050 PF08054 Leucine operon leader peptide CF57_RS19055 PF00682 HMGL-like CF57_RS19055 PF08502 LeuA allosteric (dimerisation) domain CF57_RS19060 PF00180 Isocitrate/isopropylmalate dehydrogenase CF57_RS19065 PF00330 Aconitase family (aconitate hydratase) CF57_RS19070 PF00694 Aconitase C-terminal domain CF57_RS19075 PF07690 Major Facilitator Superfamily CF57_RS19085 PF12793 Sugar transport-related sRNA regulator N-term CF57_RS19085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF57_RS19095 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS19100 PF00005 ABC transporter CF57_RS19105 PF09335 SNARE associated Golgi protein CF57_RS19110 PF12833 Helix-turn-helix domain CF57_RS19110 PF02311 AraC-like ligand binding domain CF57_RS19115 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CF57_RS19120 PF02610 L-arabinose isomerase CF57_RS19120 PF11762 L-arabinose isomerase C-terminal domain CF57_RS19125 PF00596 Class II Aldolase and Adducin N-terminal domain CF57_RS19130 PF00136 DNA polymerase family B CF57_RS19130 PF03104 DNA polymerase family B, exonuclease domain CF57_RS19135 PF18337 RapA N-terminal Tudor like domain CF57_RS19135 PF18339 RapA N-terminal Tudor like domain 1 CF57_RS19135 PF00176 SNF2 family N-terminal domain CF57_RS19135 PF12137 RNA polymerase recycling family C-terminal CF57_RS19135 PF00271 Helicase conserved C-terminal domain CF57_RS19140 PF00849 RNA pseudouridylate synthase CF57_RS19145 PF00226 DnaJ domain CF57_RS19145 PF05099 Tellurite resistance protein TerB CF57_RS19150 PF03968 OstA-like protein CF57_RS19150 PF04453 LPS transport system D CF57_RS19155 PF09312 SurA N-terminal domain CF57_RS19155 PF00639 PPIC-type PPIASE domain CF57_RS19160 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CF57_RS19165 PF00398 Ribosomal RNA adenine dimethylase CF57_RS19170 PF04379 ApaG domain CF57_RS19175 PF00149 Calcineurin-like phosphoesterase CF57_RS19180 PF00186 Dihydrofolate reductase CF57_RS19185 PF00999 Sodium/hydrogen exchanger family CF57_RS19185 PF02254 TrkA-N domain CF57_RS19190 PF02525 Flavodoxin-like fold CF57_RS19195 PF00083 Sugar (and other) transporter CF57_RS19205 PF01494 FAD binding domain CF57_RS19210 PF00766 Electron transfer flavoprotein FAD-binding domain CF57_RS19210 PF01012 Electron transfer flavoprotein domain CF57_RS19215 PF01012 Electron transfer flavoprotein domain CF57_RS19220 PF12759 InsA C-terminal domain CF57_RS19220 PF03811 InsA N-terminal domain CF57_RS19225 PF03400 IS1 transposase CF57_RS19230 PF01012 Electron transfer flavoprotein domain CF57_RS19240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CF57_RS19240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CF57_RS19240 PF02770 Acyl-CoA dehydrogenase, middle domain CF57_RS19245 PF02515 CoA-transferase family III CF57_RS19250 PF00501 AMP-binding enzyme CF57_RS19250 PF13193 AMP-binding enzyme C-terminal domain CF57_RS19255 PF00378 Enoyl-CoA hydratase/isomerase CF57_RS19260 PF00132 Bacterial transferase hexapeptide (six repeats) CF57_RS19265 PF07180 CaiF/GrlA transcriptional regulator CF57_RS19275 PF02142 MGS-like domain CF57_RS19275 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CF57_RS19275 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CF57_RS19280 PF00117 Glutamine amidotransferase class-I CF57_RS19280 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CF57_RS19295 PF01113 Dihydrodipicolinate reductase, N-terminus CF57_RS19295 PF05173 Dihydrodipicolinate reductase, C-terminus CF57_RS19300 PF01156 Inosine-uridine preferring nucleoside hydrolase CF57_RS19305 PF02401 LytB protein CF57_RS19310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CF57_RS19315 PF01252 Signal peptidase (SPase) II CF57_RS19320 PF00133 tRNA synthetases class I (I, L, M and V) CF57_RS19320 PF06827 Zinc finger found in FPG and IleRS CF57_RS19320 PF08264 Anticodon-binding domain of tRNA CF57_RS19325 PF06574 FAD synthetase CF57_RS19325 PF01687 Riboflavin kinase CF57_RS19330 PF10837 Protein of unknown function (DUF2575) CF57_RS19335 PF01649 Ribosomal protein S20 CF57_RS19345 PF03400 IS1 transposase CF57_RS19350 PF03400 IS1 transposase CF57_RS19355 PF13954 PapC N-terminal domain CF57_RS19355 PF00577 Outer membrane usher protein CF57_RS19355 PF13953 PapC C-terminal domain CF57_RS19365 PF03466 LysR substrate binding domain CF57_RS19365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS19370 PF06965 Na+/H+ antiporter 1 CF57_RS19380 PF13333 Integrase core domain CF57_RS19380 PF00665 Integrase core domain CF57_RS19380 PF13276 HTH-like domain CF57_RS19385 PF01848 Hok/gef family CF57_RS19390 PF01609 Transposase DDE domain CF57_RS19395 PF00226 DnaJ domain CF57_RS19395 PF01556 DnaJ C terminal domain CF57_RS19395 PF00684 DnaJ central domain CF57_RS19400 PF00012 Hsp70 protein CF57_RS19405 PF10807 Protein of unknown function (DUF2541) CF57_RS19410 PF13099 Domain of unknown function (DUF3944) CF57_RS19410 PF03981 Ubiquinol-cytochrome C chaperone CF57_RS19415 PF01184 GPR1/FUN34/yaaH family CF57_RS19420 PF00994 Probable molybdopterin binding domain CF57_RS19425 PF00923 Transaldolase/Fructose-6-phosphate aldolase CF57_RS19430 PF01235 Sodium:alanine symporter family CF57_RS19435 PF03883 Peroxide stress protein YaaA CF57_RS19440 PF10697 Protein of unknown function (DUF2502) CF57_RS19450 PF14821 Threonine synthase N terminus CF57_RS19450 PF00291 Pyridoxal-phosphate dependent enzyme CF57_RS19455 PF00288 GHMP kinases N terminal domain CF57_RS19455 PF08544 GHMP kinases C terminal CF57_RS19460 PF00696 Amino acid kinase family CF57_RS19460 PF03447 Homoserine dehydrogenase, NAD binding domain CF57_RS19460 PF01842 ACT domain CF57_RS19460 PF13840 ACT domain CF57_RS19460 PF00742 Homoserine dehydrogenase CF57_RS19465 PF08254 Threonine leader peptide CF57_RS19470 PF00588 SpoU rRNA Methylase family CF57_RS19480 PF00486 Transcriptional regulatory protein, C terminal CF57_RS19480 PF00072 Response regulator receiver domain CF57_RS19490 PF00672 HAMP domain CF57_RS19490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS19490 PF00512 His Kinase A (phospho-acceptor) domain CF57_RS19495 PF00486 Transcriptional regulatory protein, C terminal CF57_RS19495 PF00072 Response regulator receiver domain CF57_RS19500 PF05981 CreA protein CF57_RS19505 PF06445 GyrI-like small molecule binding domain CF57_RS19505 PF12833 Helix-turn-helix domain CF57_RS19510 PF00300 Histidine phosphatase superfamily (branch 1) CF57_RS19515 PF01931 Protein of unknown function DUF84 CF57_RS19520 PF01371 Trp repressor protein CF57_RS19525 PF01464 Transglycosylase SLT domain CF57_RS19525 PF14718 Soluble lytic murein transglycosylase L domain CF57_RS19530 PF12848 ABC transporter CF57_RS19530 PF00005 ABC transporter CF57_RS19540 PF13521 AAA domain CF57_RS19540 PF01381 Helix-turn-helix CF57_RS19545 PF18073 Rubredoxin metal binding domain CF57_RS19550 PF18429 Domain of unknown function (DUF5609) CF57_RS19555 PF10144 Bacterial virulence factor haemolysin CF57_RS19560 PF03099 Biotin/lipoate A/B protein ligase family CF57_RS19560 PF10437 Bacterial lipoate protein ligase C-terminus CF57_RS19570 PF01048 Phosphorylase superfamily CF57_RS19575 PF01676 Metalloenzyme superfamily CF57_RS19580 PF00591 Glycosyl transferase family, a/b domain CF57_RS19580 PF02885 Glycosyl transferase family, helical bundle domain CF57_RS19580 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CF57_RS19585 PF01791 DeoC/LacD family aldolase CF57_RS19595 PF11230 Protein of unknown function (DUF3029) CF57_RS19600 PF04055 Radical SAM superfamily CF57_RS19605 PF01026 TatD related DNase CF57_RS19610 PF01734 Patatin-like phospholipase CF57_RS19615 PF07043 Protein of unknown function (DUF1328) CF57_RS19620 PF04972 BON domain CF57_RS19625 PF16658 Class II release factor RF3, C-terminal domain CF57_RS19625 PF00009 Elongation factor Tu GTP binding domain CF57_RS19625 PF03144 Elongation factor Tu domain 2 CF57_RS19630 PF13419 Haloacid dehalogenase-like hydrolase CF57_RS19635 PF00583 Acetyltransferase (GNAT) family CF57_RS19640 PF03603 DNA polymerase III psi subunit CF57_RS19645 PF08468 Methyltransferase small domain N-terminal CF57_RS19645 PF05175 Methyltransferase small domain CF57_RS19670 PF07256 Protein of unknown function (DUF1435) CF57_RS19675 PF06276 Ferric iron reductase FhuF-like transporter CF57_RS19675 PF11575 FhuF 2Fe-2S C-terminal domain CF57_RS19680 PF00196 Bacterial regulatory proteins, luxR family CF57_RS19685 PF00196 Bacterial regulatory proteins, luxR family CF57_RS19690 PF06738 Putative threonine/serine exporter CF57_RS19695 PF12821 Threonine/Serine exporter, ThrE CF57_RS19700 PF17948 DnaT DNA-binding domain CF57_RS19705 PF01695 IstB-like ATP binding protein CF57_RS19710 PF10696 Protein of unknown function (DUF2501) CF57_RS19715 PF00884 Sulfatase CF57_RS19720 PF08240 Alcohol dehydrogenase GroES-like domain CF57_RS19720 PF00107 Zinc-binding dehydrogenase CF57_RS19725 PF07729 FCD domain CF57_RS19725 PF00392 Bacterial regulatory proteins, gntR family CF57_RS19730 PF07690 Major Facilitator Superfamily CF57_RS19735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CF57_RS19735 PF00672 HAMP domain CF57_RS19735 PF02203 Tar ligand binding domain homologue CF57_RS19740 PF01047 MarR family CF57_RS19745 PF01557 Fumarylacetoacetate (FAA) hydrolase family CF57_RS19750 PF00171 Aldehyde dehydrogenase family CF57_RS19755 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CF57_RS19760 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase CF57_RS19765 PF01557 Fumarylacetoacetate (FAA) hydrolase family CF57_RS19770 PF03328 HpcH/HpaI aldolase/citrate lyase family CF57_RS19775 PF07690 Major Facilitator Superfamily CF57_RS19785 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CF57_RS19785 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CF57_RS19790 PF01613 Flavin reductase like domain CF57_RS19800 PF02554 Carbon starvation protein CstA CF57_RS19800 PF13722 5TM C-terminal transporter carbon starvation CstA CF57_RS19805 PF04328 Selenoprotein, putative CF57_RS19810 PF07683 Cobalamin synthesis protein cobW C-terminal domain CF57_RS19810 PF02492 CobW/HypB/UreG, nucleotide-binding domain CF57_RS19815 PF03400 IS1 transposase CF57_RS19820 PF07690 Major Facilitator Superfamily CF57_RS19825 PF04286 Protein of unknown function (DUF445) CF57_RS19835 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CF57_RS19840 PF01869 BadF/BadG/BcrA/BcrD ATPase family CF57_RS19845 PF11823 Protein of unknown function (DUF3343) CF57_RS19850 PF06977 SdiA-regulated CF57_RS19855 PF06779 Uncharacterised MFS-type transporter YbfB CF57_RS19860 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family CF57_RS19865 PF07670 Nucleoside recognition CF57_RS19870 PF07670 Nucleoside recognition CF57_RS19875 PF01979 Amidohydrolase family CF57_RS19880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS19880 PF03466 LysR substrate binding domain CF57_RS19885 PF04965 Gene 25-like lysozyme CF57_RS19900 PF10887 Protein of unknown function (DUF2686) CF57_RS19905 PF07729 FCD domain CF57_RS19905 PF00392 Bacterial regulatory proteins, gntR family CF57_RS19915 PF08125 Mannitol dehydrogenase C-terminal domain CF57_RS19915 PF01232 Mannitol dehydrogenase Rossmann domain CF57_RS19920 PF03786 D-mannonate dehydratase (UxuA) CF57_RS19930 PF02447 GntP family permease CF57_RS19935 PF09160 FimH, mannose binding CF57_RS19935 PF00419 Fimbrial protein CF57_RS19945 PF01527 Transposase CF57_RS19950 PF13276 HTH-like domain CF57_RS19950 PF00665 Integrase core domain CF57_RS19965 PF03400 IS1 transposase CF57_RS19975 PF04542 Sigma-70 region 2 CF57_RS19975 PF08281 Sigma-70, region 4 CF57_RS19980 PF04773 FecR protein CF57_RS19980 PF16220 Domain of unknown function (DUF4880) CF57_RS19985 PF07715 TonB-dependent Receptor Plug Domain CF57_RS19985 PF00593 TonB dependent receptor CF57_RS19985 PF07660 Secretin and TonB N terminus short domain CF57_RS19990 PF01497 Periplasmic binding protein CF57_RS19995 PF01032 FecCD transport family CF57_RS20000 PF01032 FecCD transport family CF57_RS20005 PF00005 ABC transporter CF57_RS20015 PF00665 Integrase core domain CF57_RS20025 PF05717 IS66 Orf2 like protein CF57_RS20030 PF13817 IS66 C-terminal element CF57_RS20030 PF03050 Transposase IS66 family CF57_RS20030 PF13005 zinc-finger binding domain of transposase IS66 CF57_RS20030 PF13007 Transposase C of IS166 homeodomain CF57_RS20035 PF00665 Integrase core domain CF57_RS20035 PF13936 Helix-turn-helix domain CF57_RS20045 PF03400 IS1 transposase CF57_RS20060 PF00589 Phage integrase family CF57_RS20065 PF01051 Initiator Replication protein CF57_RS20085 PF03400 IS1 transposase CF57_RS20090 PF08402 TOBE domain CF57_RS20090 PF00005 ABC transporter CF57_RS20095 PF02574 Homocysteine S-methyltransferase CF57_RS20100 PF00324 Amino acid permease CF57_RS20105 PF01609 Transposase DDE domain CF57_RS20105 PF05598 Transposase domain (DUF772) CF57_RS20130 PF02384 N-6 DNA Methylase CF57_RS20130 PF12161 HsdM N-terminal domain CF57_RS20135 PF01420 Type I restriction modification DNA specificity domain CF57_RS20140 PF12008 Type I restriction and modification enzyme - subunit R C terminal CF57_RS20140 PF18766 SWI2/SNF2 ATPase CF57_RS20140 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CF57_RS20145 PF03400 IS1 transposase CF57_RS20165 PF01850 PIN domain CF57_RS20170 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CF57_RS20185 PF01527 Transposase CF57_RS20210 PF13936 Helix-turn-helix domain CF57_RS20210 PF00665 Integrase core domain CF57_RS20215 PF13333 Integrase core domain CF57_RS20215 PF00665 Integrase core domain CF57_RS20215 PF13276 HTH-like domain CF57_RS20225 PF03400 IS1 transposase CF57_RS20230 PF12759 InsA C-terminal domain CF57_RS20230 PF03811 InsA N-terminal domain CF57_RS20235 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF57_RS20235 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CF57_RS20240 PF13610 DDE domain CF57_RS20250 PF00589 Phage integrase family CF57_RS20260 PF10609 NUBPL iron-transfer P-loop NTPase CF57_RS20265 PF06406 StbA protein CF57_RS20275 PF13438 Domain of unknown function (DUF4113) CF57_RS20275 PF00817 impB/mucB/samB family CF57_RS20275 PF11799 impB/mucB/samB family C-terminal domain CF57_RS20280 PF00717 Peptidase S24-like CF57_RS20285 PF06183 DinI-like family CF57_RS20290 PF06924 Protein of unknown function (DUF1281) CF57_RS20300 PF01555 DNA methylase CF57_RS20310 PF07128 Protein of unknown function (DUF1380) CF57_RS20320 PF01609 Transposase DDE domain CF57_RS20325 PF07339 Protein of unknown function (DUF1472) CF57_RS20330 PF03230 Antirestriction protein CF57_RS20335 PF07128 Protein of unknown function (DUF1380) CF57_RS20375 PF00436 Single-strand binding protein family CF57_RS20380 PF06006 Bacterial protein of unknown function (DUF905) CF57_RS20385 PF02195 ParB-like nuclease domain CF57_RS20390 PF06290 Plasmid SOS inhibition protein (PsiB) CF57_RS20395 PF06952 PsiA protein CF57_RS20405 PF01848 Hok/gef family CF57_RS20425 PF06067 Domain of unknown function (DUF932) CF57_RS20430 PF01464 Transglycosylase SLT domain CF57_RS20435 PF05261 TraM protein, DNA-binding CF57_RS20440 PF00989 PAS fold CF57_RS20445 PF05509 TraY domain CF57_RS20450 PF05513 TraA CF57_RS20455 PF07178 TraL protein CF57_RS20460 PF05309 TraE protein CF57_RS20465 PF06586 TraK protein CF57_RS20470 PF03743 Bacterial conjugation TrbI-like protein CF57_RS20475 PF07296 TraP protein CF57_RS20480 PF10894 Protein of unknown function (DUF2689) CF57_RS20490 PF09676 Type IV conjugative transfer system lipoprotein (TraV) CF57_RS20500 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer CF57_RS20505 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) CF57_RS20510 PF12477 Sex factor F TraW protein N terminal CF57_RS20515 PF06834 TraU protein CF57_RS20520 PF09673 Type-F conjugative transfer system pilin assembly protein CF57_RS20525 PF06986 Type-1V conjugative transfer system mating pair stabilisation CF57_RS20530 PF11100 Conjugal transfer protein TrbE CF57_RS20535 PF13728 F plasmid transfer operon protein CF57_RS20545 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) CF57_RS20550 PF13728 F plasmid transfer operon protein CF57_RS20560 PF06122 Conjugative relaxosome accessory transposon protein CF57_RS20565 PF07916 TraG-like protein, N-terminal region CF57_RS20575 PF05818 Enterobacterial TraT complement resistance protein CF57_RS20580 PF12615 F sex factor protein N terminal CF57_RS20580 PF10412 Type IV secretion-system coupling protein DNA-binding domain CF57_RS20585 PF07057 DNA helicase TraI CF57_RS20585 PF18272 single-stranded DNA binding TraI N-terminal subdomain CF57_RS20585 PF08751 TrwC relaxase CF57_RS20585 PF18340 DNA relaxase TraI 2B/2B-like domain CF57_RS20590 PF05857 TraX protein CF57_RS20595 PF04352 ProQ/FINO family CF57_RS20595 PF12602 Fertility inhibition protein N terminal CF57_RS20605 PF01848 Hok/gef family CF57_RS20610 PF10723 Replication regulatory protein RepB CF57_RS20615 PF02387 IncFII RepA protein family CF57_RS20620 PF02517 CPBP intramembrane metalloprotease CF57_RS20630 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CF57_RS20640 PF03400 IS1 transposase CF57_RS20645 PF00376 MerR family regulatory protein CF57_RS20645 PF09278 MerR, DNA binding CF57_RS20650 PF02411 MerT mercuric transport protein CF57_RS20655 PF00403 Heavy-metal-associated domain CF57_RS20660 PF03203 MerC mercury resistance protein CF57_RS20665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CF57_RS20665 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF57_RS20665 PF00403 Heavy-metal-associated domain CF57_RS20670 PF13411 MerR HTH family regulatory protein CF57_RS20675 PF05052 MerE protein CF57_RS20680 PF13188 PAS domain CF57_RS20680 PF00563 EAL domain CF57_RS20680 PF00990 Diguanylate cyclase, GGDEF domain CF57_RS20680 PF03707 Bacterial signalling protein N terminal repeat CF57_RS20690 PF13610 DDE domain CF57_RS20705 PF00809 Pterin binding enzyme CF57_RS20710 PF01636 Phosphotransferase enzyme family CF57_RS20715 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase CF57_RS20720 PF13610 DDE domain CF57_RS20725 PF03400 IS1 transposase CF57_RS20730 PF01636 Phosphotransferase enzyme family CF57_RS20750 PF02796 Helix-turn-helix domain of resolvase CF57_RS20750 PF00239 Resolvase, N terminal domain CF57_RS20755 PF13610 DDE domain CF57_RS20760 PF02796 Helix-turn-helix domain of resolvase CF57_RS20760 PF00239 Resolvase, N terminal domain CF57_RS20770 PF00440 Bacterial regulatory proteins, tetR family CF57_RS20770 PF02909 Tetracyclin repressor-like, C-terminal domain CF57_RS20775 PF07690 Major Facilitator Superfamily CF57_RS20780 PF00892 EamA-like transporter family CF57_RS20790 PF01526 Tn3 transposase DDE domain CF57_RS20790 PF13700 Domain of unknown function (DUF4158) CF57_RS20795 PF08281 Sigma-70, region 4 CF57_RS20795 PF04542 Sigma-70 region 2 CF57_RS20800 PF16220 Domain of unknown function (DUF4880) CF57_RS20800 PF04773 FecR protein CF57_RS20805 PF00593 TonB dependent receptor CF57_RS20805 PF07715 TonB-dependent Receptor Plug Domain CF57_RS20805 PF07660 Secretin and TonB N terminus short domain CF57_RS20810 PF01497 Periplasmic binding protein CF57_RS20815 PF01032 FecCD transport family CF57_RS20825 PF00005 ABC transporter CF57_RS20830 PF01497 Periplasmic binding protein CF57_RS20835 PF01032 FecCD transport family CF57_RS20840 PF01032 FecCD transport family CF57_RS20845 PF00005 ABC transporter CF57_RS20855 PF01527 Transposase CF57_RS20875 PF08240 Alcohol dehydrogenase GroES-like domain CF57_RS20875 PF00107 Zinc-binding dehydrogenase CF57_RS20880 PF05872 Bacterial protein of unknown function (DUF853) CF57_RS20885 PF03739 Lipopolysaccharide export system permease LptF/LptG CF57_RS20890 PF03739 Lipopolysaccharide export system permease LptF/LptG CF57_RS20895 PF00883 Cytosol aminopeptidase family, catalytic domain CF57_RS20895 PF02789 Cytosol aminopeptidase family, N-terminal domain CF57_RS20900 PF04364 DNA polymerase III chi subunit, HolC CF57_RS20905 PF08264 Anticodon-binding domain of tRNA CF57_RS20905 PF10458 Valyl tRNA synthetase tRNA binding arm CF57_RS20905 PF00133 tRNA synthetases class I (I, L, M and V) CF57_RS20910 PF05987 Bacterial protein of unknown function (DUF898) CF57_RS20915 PF00583 Acetyltransferase (GNAT) family CF57_RS20920 PF06877 Regulator of ribonuclease activity B CF57_RS20925 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CF57_RS20925 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CF57_RS20935 PF04074 YhcH/YjgK/YiaL CF57_RS20940 PF00440 Bacterial regulatory proteins, tetR family CF57_RS20950 PF01042 Endoribonuclease L-PSP CF57_RS20960 PF08052 PyrBI operon leader peptide CF57_RS20965 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CF57_RS20965 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CF57_RS20970 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CF57_RS20970 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CF57_RS20975 PF01042 Endoribonuclease L-PSP CF57_RS20980 PF00689 Cation transporting ATPase, C-terminus CF57_RS20980 PF00690 Cation transporter/ATPase, N-terminus CF57_RS20985 PF00356 Bacterial regulatory proteins, lacI family CF57_RS20990 PF00367 phosphotransferase system, EIIB CF57_RS20990 PF02378 Phosphotransferase system, EIIC CF57_RS20995 PF00128 Alpha amylase, catalytic domain CF57_RS20995 PF11941 Domain of unknown function (DUF3459) CF57_RS21000 PF13597 Anaerobic ribonucleoside-triphosphate reductase CF57_RS21000 PF03477 ATP cone domain CF57_RS21010 PF07361 Cytochrome b562 CF57_RS21015 PF01523 Putative modulator of DNA gyrase CF57_RS21020 PF04751 Protein of unknown function (DUF615) CF57_RS21025 PF01225 Mur ligase family, catalytic domain CF57_RS21025 PF02875 Mur ligase family, glutamate ligase domain CF57_RS21025 PF08245 Mur ligase middle domain CF57_RS21030 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CF57_RS21035 PF02653 Branched-chain amino acid transport system / permease component CF57_RS21040 PF02653 Branched-chain amino acid transport system / permease component CF57_RS21045 PF00005 ABC transporter CF57_RS21050 PF13407 Periplasmic binding protein domain CF57_RS21055 PF00719 Inorganic pyrophosphatase CF57_RS21060 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like CF57_RS21065 PF04357 TamB, inner membrane protein subunit of TAM complex CF57_RS21070 PF01103 Surface antigen CF57_RS21070 PF17243 POTRA domain TamA domain 1 CF57_RS21070 PF07244 Surface antigen variable number repeat CF57_RS21080 PF01625 Peptide methionine sulfoxide reductase CF57_RS21085 PF01595 Cyclin M transmembrane N-terminal domain CF57_RS21085 PF03471 Transporter associated domain CF57_RS21085 PF00571 CBS domain CF57_RS21090 PF06526 Protein of unknown function (DUF1107) CF57_RS21095 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CF57_RS21100 PF00459 Inositol monophosphatase family CF57_RS21105 PF02872 5'-nucleotidase, C-terminal domain CF57_RS21105 PF00149 Calcineurin-like phosphoesterase CF57_RS21110 PF01638 HxlR-like helix-turn-helix CF57_RS21115 PF05368 NmrA-like family CF57_RS21120 PF00892 EamA-like transporter family CF57_RS21125 PF01814 Hemerythrin HHE cation binding domain CF57_RS21125 PF04405 Domain of Unknown function (DUF542) CF57_RS21130 PF00324 Amino acid permease CF57_RS21135 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CF57_RS21135 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CF57_RS21140 PF08525 Opacity-associated protein A N-terminal motif CF57_RS21140 PF04225 Opacity-associated protein A LysM-like domain CF57_RS21145 PF17938 Tetracyclin repressor-like, C-terminal domain CF57_RS21160 PF00378 Enoyl-CoA hydratase/isomerase CF57_RS21165 PF01144 Coenzyme A transferase CF57_RS21170 PF02910 Fumarate reductase flavoprotein C-term CF57_RS21170 PF00890 FAD binding domain CF57_RS21175 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CF57_RS21180 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CF57_RS21185 PF03480 Bacterial extracellular solute-binding protein, family 7 CF57_RS21190 PF01281 Ribosomal protein L9, N-terminal domain CF57_RS21190 PF03948 Ribosomal protein L9, C-terminal domain CF57_RS21195 PF01084 Ribosomal protein S18 CF57_RS21200 PF00436 Single-strand binding protein family CF57_RS21205 PF01250 Ribosomal protein S6 CF57_RS21215 PF07338 Protein of unknown function (DUF1471) CF57_RS21220 PF00596 Class II Aldolase and Adducin N-terminal domain CF57_RS21230 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CF57_RS21235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF57_RS21240 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF57_RS21245 PF03611 PTS system sugar-specific permease component CF57_RS21255 PF08220 DeoR-like helix-turn-helix domain CF57_RS21255 PF00455 DeoR C terminal sensor domain CF57_RS21260 PF00326 Prolyl oligopeptidase family CF57_RS21265 PF07338 Protein of unknown function (DUF1471) CF57_RS21270 PF07338 Protein of unknown function (DUF1471) CF57_RS21275 PF02770 Acyl-CoA dehydrogenase, middle domain CF57_RS21275 PF18158 Adaptive response protein AidB N-terminal domain CF57_RS21275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CF57_RS21280 PF03738 Glutathionylspermidine synthase preATP-grasp CF57_RS21285 PF06693 Protein of unknown function (DUF1190) CF57_RS21290 PF03994 Domain of Unknown Function (DUF350) CF57_RS21295 PF10679 Protein of unknown function (DUF2491) CF57_RS21300 PF04012 PspA/IM30 family CF57_RS21305 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) CF57_RS21310 PF00588 SpoU rRNA Methylase family CF57_RS21310 PF08032 RNA 2'-O ribose methyltransferase substrate binding CF57_RS21315 PF08461 Ribonuclease R winged-helix domain CF57_RS21315 PF17876 Cold shock domain CF57_RS21315 PF00575 S1 RNA binding domain CF57_RS21315 PF00773 RNB domain CF57_RS21315 PF08206 Ribonuclease B OB domain CF57_RS21320 PF02082 Transcriptional regulator CF57_RS21325 PF00709 Adenylosuccinate synthetase CF57_RS21330 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CF57_RS21335 PF01145 SPFH domain / Band 7 family CF57_RS21340 PF01145 SPFH domain / Band 7 family CF57_RS21340 PF12221 Bacterial membrane protein N terminal CF57_RS21345 PF01926 50S ribosome-binding GTPase CF57_RS21345 PF13167 GTP-binding GTPase N-terminal CF57_RS21345 PF16360 GTP-binding GTPase Middle Region CF57_RS21350 PF17209 Hfq protein CF57_RS21360 PF01119 DNA mismatch repair protein, C-terminal domain CF57_RS21360 PF08676 MutL C terminal dimerisation domain CF57_RS21365 PF01520 N-acetylmuramoyl-L-alanine amidase CF57_RS21370 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CF57_RS21375 PF03853 YjeF-related protein N-terminus CF57_RS21375 PF01256 Carbohydrate kinase CF57_RS21380 PF08331 Domain of unknown function (DUF1730) CF57_RS21400 PF00929 Exonuclease CF57_RS21405 PF03193 RsgA GTPase CF57_RS21410 PF02666 Phosphatidylserine decarboxylase CF57_RS21415 PF00924 Mechanosensitive ion channel CF57_RS21415 PF12795 Mechanosensitive ion channel porin domain CF57_RS21415 PF12794 Mechanosensitive ion channel inner membrane domain 1 CF57_RS21420 PF10840 Protein of unknown function (DUF2645) CF57_RS21430 PF13520 Amino acid permease CF57_RS21435 PF00152 tRNA synthetases class II (D, K and N) CF57_RS21440 PF00890 FAD binding domain CF57_RS21440 PF02910 Fumarate reductase flavoprotein C-term CF57_RS21445 PF13183 4Fe-4S dicluster domain CF57_RS21445 PF13085 2Fe-2S iron-sulfur cluster binding domain CF57_RS21450 PF02300 Fumarate reductase subunit C CF57_RS21455 PF02313 Fumarate reductase subunit D CF57_RS21460 PF00144 Beta-lactamase CF57_RS21465 PF08212 Lipocalin-like domain CF57_RS21470 PF00893 Small Multidrug Resistance protein CF57_RS21475 PF08085 Entericidin EcnA/B family CF57_RS21480 PF08085 Entericidin EcnA/B family CF57_RS21485 PF01132 Elongation factor P (EF-P) OB domain CF57_RS21485 PF08207 Elongation factor P (EF-P) KOW-like domain CF57_RS21485 PF09285 Elongation factor P, C-terminal CF57_RS21490 PF04055 Radical SAM superfamily CF57_RS21495 PF15922 YjeJ-like CF57_RS21500 PF13698 Domain of unknown function (DUF4156) CF57_RS21505 PF00118 TCP-1/cpn60 chaperonin family CF57_RS21510 PF00166 Chaperonin 10 Kd subunit CF57_RS21515 PF13520 Amino acid permease CF57_RS21520 PF04186 FxsA cytoplasmic membrane protein CF57_RS21525 PF00206 Lyase CF57_RS21525 PF10415 Fumarase C C-terminus CF57_RS21530 PF03605 Anaerobic c4-dicarboxylate membrane transporter CF57_RS21535 PF03091 CutA1 divalent ion tolerance protein CF57_RS21540 PF02683 Cytochrome C biogenesis protein transmembrane region CF57_RS21540 PF11412 Disulphide bond corrector protein DsbC CF57_RS21555 PF00486 Transcriptional regulatory protein, C terminal CF57_RS21555 PF18500 CadC C-terminal domain 1 CF57_RS21560 PF13520 Amino acid permease CF57_RS21565 PF01276 Orn/Lys/Arg decarboxylase, major domain CF57_RS21565 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CF57_RS21565 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CF57_RS21570 PF00854 POT family CF57_RS21575 PF01336 OB-fold nucleic acid binding domain CF57_RS21575 PF00152 tRNA synthetases class II (D, K and N) CF57_RS21580 PF10753 Toxin GhoT_OrtT CF57_RS21585 PF11080 Endoribonuclease GhoS CF57_RS21590 PF14542 GCN5-related N-acetyl-transferase CF57_RS21595 PF06902 Divergent 4Fe-4S mono-cluster CF57_RS21600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS21600 PF17203 Single cache domain 3 CF57_RS21600 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CF57_RS21600 PF00989 PAS fold CF57_RS21605 PF00072 Response regulator receiver domain CF57_RS21615 PF03605 Anaerobic c4-dicarboxylate membrane transporter CF57_RS21620 PF05683 Fumarase C-terminus CF57_RS21620 PF05681 Fumarate hydratase (Fumerase) CF57_RS21625 PF09997 Predicted membrane protein (DUF2238) CF57_RS21635 PF02056 Family 4 glycosyl hydrolase CF57_RS21635 PF11975 Family 4 glycosyl hydrolase C-terminal domain CF57_RS21645 PF12833 Helix-turn-helix domain CF57_RS21650 PF01276 Orn/Lys/Arg decarboxylase, major domain CF57_RS21650 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CF57_RS21650 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CF57_RS21655 PF12833 Helix-turn-helix domain CF57_RS21660 PF03400 IS1 transposase CF57_RS21665 PF13520 Amino acid permease CF57_RS21670 PF00884 Sulfatase CF57_RS21670 PF08019 Phosphoethanolamine transferase EptA/EptB CF57_RS21675 PF00486 Transcriptional regulatory protein, C terminal CF57_RS21675 PF00072 Response regulator receiver domain CF57_RS21680 PF00512 His Kinase A (phospho-acceptor) domain CF57_RS21680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS21690 PF00083 Sugar (and other) transporter CF57_RS21690 PF08946 Osmosensory transporter coiled coil CF57_RS21695 PF13990 YjcZ-like protein CF57_RS21700 PF00350 Dynamin family CF57_RS21705 PF03831 PhnA domain CF57_RS21705 PF08274 PhnA Zinc-Ribbon CF57_RS21710 PF06983 3-demethylubiquinone-9 3-methyltransferase CF57_RS21715 PF00005 ABC transporter CF57_RS21725 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS21730 PF07702 UTRA domain CF57_RS21730 PF00392 Bacterial regulatory proteins, gntR family CF57_RS21735 PF06754 Phosphonate metabolism protein PhnG CF57_RS21740 PF05845 Bacterial phosphonate metabolism protein (PhnH) CF57_RS21745 PF05861 Bacterial phosphonate metabolism protein (PhnI) CF57_RS21750 PF06007 Phosphonate metabolism protein PhnJ CF57_RS21755 PF00005 ABC transporter CF57_RS21760 PF00005 ABC transporter CF57_RS21765 PF07969 Amidohydrolase family CF57_RS21775 PF00583 Acetyltransferase (GNAT) family CF57_RS21780 PF12706 Beta-lactamase superfamily domain CF57_RS21790 PF02502 Ribose/Galactose Isomerase CF57_RS21795 PF01380 SIS domain CF57_RS21795 PF01418 Helix-turn-helix domain, rpiR family CF57_RS21800 PF13407 Periplasmic binding protein domain CF57_RS21805 PF00005 ABC transporter CF57_RS21810 PF02653 Branched-chain amino acid transport system / permease component CF57_RS21815 PF00834 Ribulose-phosphate 3 epimerase family CF57_RS21820 PF00480 ROK family CF57_RS21825 PF14863 Alkyl sulfatase dimerisation CF57_RS21825 PF14864 Alkyl sulfatase C-terminal CF57_RS21825 PF00753 Metallo-beta-lactamase superfamily CF57_RS21830 PF17090 Uncharacterised protein family CF57_RS21835 PF00529 HlyD membrane-fusion protein of T1SS CF57_RS21835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF57_RS21840 PF04632 Fusaric acid resistance protein family CF57_RS21845 PF02321 Outer membrane efflux protein CF57_RS21850 PF01568 Molydopterin dinucleotide binding domain CF57_RS21850 PF00384 Molybdopterin oxidoreductase CF57_RS21850 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF57_RS21855 PF00384 Molybdopterin oxidoreductase CF57_RS21855 PF01568 Molydopterin dinucleotide binding domain CF57_RS21855 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF57_RS21860 PF08238 Sel1 repeat CF57_RS21865 PF00375 Sodium:dicarboxylate symporter family CF57_RS21875 PF03918 Cytochrome C biogenesis protein CF57_RS21880 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CF57_RS21880 PF01578 Cytochrome C assembly protein CF57_RS21885 PF03916 Polysulphide reductase, NrfD CF57_RS21890 PF00037 4Fe-4S binding domain CF57_RS21890 PF13247 4Fe-4S dicluster domain CF57_RS21895 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) CF57_RS21895 PF13435 Cytochrome c554 and c-prime CF57_RS21900 PF02335 Cytochrome c552 CF57_RS21905 PF13193 AMP-binding enzyme C-terminal domain CF57_RS21905 PF00501 AMP-binding enzyme CF57_RS21905 PF16177 Acetyl-coenzyme A synthetase N-terminus CF57_RS21910 PF04341 Protein of unknown function, DUF485 CF57_RS21915 PF00474 Sodium:solute symporter family CF57_RS21920 PF00805 Pentapeptide repeats (8 copies) CF57_RS21925 PF00999 Sodium/hydrogen exchanger family CF57_RS21930 PF00860 Permease family CF57_RS21935 PF09278 MerR, DNA binding CF57_RS21935 PF00376 MerR family regulatory protein CF57_RS21940 PF12833 Helix-turn-helix domain CF57_RS21945 PF12792 CSS motif domain associated with EAL CF57_RS21945 PF00563 EAL domain CF57_RS21950 PF15940 Family of unknown function CF57_RS21955 PF00436 Single-strand binding protein family CF57_RS21960 PF17760 UvrA interaction domain CF57_RS21960 PF17755 UvrA DNA-binding domain CF57_RS21960 PF00005 ABC transporter CF57_RS21965 PF04237 YjbR CF57_RS21975 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CF57_RS21985 PF00155 Aminotransferase class I and II CF57_RS21990 PF00842 Alanine racemase, C-terminal domain CF57_RS21990 PF01168 Alanine racemase, N-terminal domain CF57_RS21995 PF00772 DnaB-like helicase N terminal domain CF57_RS21995 PF03796 DnaB-like helicase C terminal domain CF57_RS22000 PF00107 Zinc-binding dehydrogenase CF57_RS22000 PF08240 Alcohol dehydrogenase GroES-like domain CF57_RS22005 PF09583 Phage shock protein G (Phageshock_PspG) CF57_RS22010 PF01207 Dihydrouridine synthase (Dus) CF57_RS22015 PF10897 Protein of unknown function (DUF2713) CF57_RS22025 PF01475 Ferric uptake regulator family CF57_RS22030 PF05532 CsbD-like CF57_RS22035 PF01554 MatE CF57_RS22040 PF00717 Peptidase S24-like CF57_RS22040 PF01726 LexA DNA binding domain CF57_RS22045 PF01219 Prokaryotic diacylglycerol kinase CF57_RS22050 PF01553 Acyltransferase CF57_RS22055 PF01040 UbiA prenyltransferase family CF57_RS22060 PF04345 Chorismate lyase CF57_RS22065 PF13981 SopA-like central domain CF57_RS22065 PF13599 Pentapeptide repeats (9 copies) CF57_RS22075 PF07148 Maltose operon periplasmic protein precursor (MalM) CF57_RS22080 PF02264 LamB porin CF57_RS22085 PF17912 MalK OB fold domain CF57_RS22085 PF00005 ABC transporter CF57_RS22095 PF01547 Bacterial extracellular solute-binding protein CF57_RS22100 PF14785 Maltose transport system permease protein MalF P2 domain CF57_RS22100 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS22105 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS22110 PF00083 Sugar (and other) transporter CF57_RS22115 PF06146 Phosphate-starvation-inducible E CF57_RS22130 PF17089 Uncharacterised protein family CF57_RS22135 PF06082 Exopolysaccharide biosynthesis protein YbjH CF57_RS22140 PF06251 Capsule biosynthesis GfcC CF57_RS22145 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF CF57_RS22150 PF11106 Exopolysaccharide production protein YjbE CF57_RS22155 PF00342 Phosphoglucose isomerase CF57_RS22160 PF00696 Amino acid kinase family CF57_RS22160 PF01842 ACT domain CF57_RS22165 PF11656 YjbD family (DUF3811) CF57_RS22170 PF00849 RNA pseudouridylate synthase CF57_RS22170 PF01479 S4 domain CF57_RS22175 PF03575 Peptidase family S51 CF57_RS22180 PF02690 Na+/Pi-cotransporter CF57_RS22185 PF02574 Homocysteine S-methyltransferase CF57_RS22185 PF00809 Pterin binding enzyme CF57_RS22185 PF02965 Vitamin B12 dependent methionine synthase, activation domain CF57_RS22185 PF02607 B12 binding domain CF57_RS22185 PF02310 B12 binding domain CF57_RS22190 PF09339 IclR helix-turn-helix domain CF57_RS22190 PF01614 Bacterial transcriptional regulator CF57_RS22195 PF07906 ShET2 enterotoxin, N-terminal region CF57_RS22195 PF07906 ShET2 enterotoxin, N-terminal region CF57_RS22200 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CF57_RS22205 PF00463 Isocitrate lyase family CF57_RS22210 PF01274 Malate synthase CF57_RS22215 PF04204 Homoserine O-succinyltransferase CF57_RS22220 PF13673 Acetyltransferase (GNAT) domain CF57_RS22245 PF02142 MGS-like domain CF57_RS22245 PF01808 AICARFT/IMPCHase bienzyme CF57_RS22250 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CF57_RS22250 PF02843 Phosphoribosylglycinamide synthetase, C domain CF57_RS22250 PF02844 Phosphoribosylglycinamide synthetase, N domain CF57_RS22255 PF02954 Bacterial regulatory protein, Fis family CF57_RS22255 PF00072 Response regulator receiver domain CF57_RS22255 PF00158 Sigma-54 interaction domain CF57_RS22260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS22260 PF00512 His Kinase A (phospho-acceptor) domain CF57_RS22265 PF13801 Heavy-metal resistance CF57_RS22270 PF07356 Protein of unknown function (DUF1481) CF57_RS22275 PF00216 Bacterial DNA-binding protein CF57_RS22280 PF04222 Protein of unknown function (DUF416) CF57_RS22285 PF04493 Endonuclease V CF57_RS22290 PF01208 Uroporphyrinogen decarboxylase (URO-D) CF57_RS22295 PF09297 NADH pyrophosphatase zinc ribbon domain CF57_RS22295 PF00293 NUDIX domain CF57_RS22300 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CF57_RS22305 PF13667 ThiC-associated domain CF57_RS22305 PF01964 Radical SAM ThiC family CF57_RS22310 PF02581 Thiamine monophosphate synthase CF57_RS22315 PF00899 ThiF family CF57_RS22320 PF02597 ThiS family CF57_RS22325 PF05690 Thiazole biosynthesis protein ThiG CF57_RS22330 PF04055 Radical SAM superfamily CF57_RS22330 PF06968 Biotin and Thiamin Synthesis associated domain CF57_RS22340 PF04998 RNA polymerase Rpb1, domain 5 CF57_RS22340 PF05000 RNA polymerase Rpb1, domain 4 CF57_RS22340 PF04983 RNA polymerase Rpb1, domain 3 CF57_RS22340 PF00623 RNA polymerase Rpb1, domain 2 CF57_RS22340 PF04997 RNA polymerase Rpb1, domain 1 CF57_RS22345 PF04563 RNA polymerase beta subunit CF57_RS22345 PF04561 RNA polymerase Rpb2, domain 2 CF57_RS22345 PF10385 RNA polymerase beta subunit external 1 domain CF57_RS22345 PF00562 RNA polymerase Rpb2, domain 6 CF57_RS22345 PF04560 RNA polymerase Rpb2, domain 7 CF57_RS22345 PF04565 RNA polymerase Rpb2, domain 3 CF57_RS22350 PF00542 Ribosomal protein L7/L12 C-terminal domain CF57_RS22350 PF16320 Ribosomal protein L7/L12 dimerisation domain CF57_RS22355 PF00466 Ribosomal protein L10 CF57_RS22360 PF00687 Ribosomal protein L1p/L10e family CF57_RS22365 PF00298 Ribosomal protein L11, RNA binding domain CF57_RS22365 PF03946 Ribosomal protein L11, N-terminal domain CF57_RS22370 PF02357 Transcription termination factor nusG CF57_RS22370 PF00467 KOW motif CF57_RS22375 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CF57_RS22380 PF03143 Elongation factor Tu C-terminal domain CF57_RS22380 PF03144 Elongation factor Tu domain 2 CF57_RS22380 PF00009 Elongation factor Tu GTP binding domain CF57_RS22410 PF00485 Phosphoribulokinase / Uridine kinase family CF57_RS22415 PF03099 Biotin/lipoate A/B protein ligase family CF57_RS22415 PF02237 Biotin protein ligase C terminal domain CF57_RS22415 PF08279 HTH domain CF57_RS22420 PF01565 FAD binding domain CF57_RS22420 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CF57_RS22445 PF01177 Asp/Glu/Hydantoin racemase CF57_RS22450 PF00593 TonB dependent receptor CF57_RS22450 PF07715 TonB-dependent Receptor Plug Domain CF57_RS22455 PF05958 tRNA (Uracil-5-)-methyltransferase CF57_RS22460 PF07226 Protein of unknown function (DUF1422) CF57_RS22465 PF00440 Bacterial regulatory proteins, tetR family CF57_RS22470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CF57_RS22470 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF57_RS22475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS22475 PF03466 LysR substrate binding domain CF57_RS22480 PF00206 Lyase CF57_RS22480 PF14698 Argininosuccinate lyase C-terminal CF57_RS22485 PF00696 Amino acid kinase family CF57_RS22490 PF02774 Semialdehyde dehydrogenase, dimerisation domain CF57_RS22490 PF01118 Semialdehyde dehydrogenase, NAD binding domain CF57_RS22495 PF01546 Peptidase family M20/M25/M40 CF57_RS22495 PF07687 Peptidase dimerisation domain CF57_RS22505 PF00311 Phosphoenolpyruvate carboxylase CF57_RS22510 PF00884 Sulfatase CF57_RS22515 PF12833 Helix-turn-helix domain CF57_RS22520 PF03400 IS1 transposase CF57_RS22525 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF57_RS22530 PF04055 Radical SAM superfamily CF57_RS22535 PF01228 Glycine radical CF57_RS22535 PF02901 Pyruvate formate lyase-like CF57_RS22540 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF57_RS22550 PF02896 PEP-utilising enzyme, TIM barrel domain CF57_RS22550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF57_RS22550 PF00391 PEP-utilising enzyme, mobile domain CF57_RS22550 PF00381 PTS HPr component phosphorylation site CF57_RS22550 PF05524 PEP-utilising enzyme, N-terminal CF57_RS22555 PF00923 Transaldolase/Fructose-6-phosphate aldolase CF57_RS22560 PF00465 Iron-containing alcohol dehydrogenase CF57_RS22575 PF00892 EamA-like transporter family CF57_RS22580 PF00141 Peroxidase CF57_RS22585 PF02219 Methylenetetrahydrofolate reductase CF57_RS22595 PF03447 Homoserine dehydrogenase, NAD binding domain CF57_RS22595 PF00742 Homoserine dehydrogenase CF57_RS22595 PF00696 Amino acid kinase family CF57_RS22600 PF01053 Cys/Met metabolism PLP-dependent enzyme CF57_RS22605 PF01340 Met Apo-repressor, MetJ CF57_RS22610 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CF57_RS22620 PF03400 IS1 transposase CF57_RS22625 PF03400 IS1 transposase CF57_RS22635 PF05593 RHS Repeat CF57_RS22635 PF03527 RHS protein CF57_RS22635 PF03527 RHS protein CF57_RS22635 PF05593 RHS Repeat CF57_RS22640 PF01197 Ribosomal protein L31 CF57_RS22645 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CF57_RS22645 PF18074 Primosomal protein N C-terminal domain CF57_RS22645 PF17764 3′ DNA-binding domain (3′BD) CF57_RS22645 PF00271 Helicase conserved C-terminal domain CF57_RS22645 PF00270 DEAD/DEAH box helicase CF57_RS22650 PF00356 Bacterial regulatory proteins, lacI family CF57_RS22655 PF05036 Sporulation related domain CF57_RS22660 PF00227 Proteasome subunit CF57_RS22665 PF07724 AAA domain (Cdc48 subfamily) CF57_RS22665 PF00004 ATPase family associated with various cellular activities (AAA) CF57_RS22665 PF10431 C-terminal, D2-small domain, of ClpB protein CF57_RS22670 PF01040 UbiA prenyltransferase family CF57_RS22675 PF03737 Aldolase/RraA CF57_RS22680 PF06005 Cell division protein ZapB CF57_RS22685 PF00230 Major intrinsic protein CF57_RS22690 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CF57_RS22690 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CF57_RS22695 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CF57_RS22700 PF00175 Oxidoreductase NAD-binding domain CF57_RS22700 PF00970 Oxidoreductase FAD-binding domain CF57_RS22705 PF00582 Universal stress protein family CF57_RS22710 PF04175 Protein of unknown function (DUF406) CF57_RS22715 PF05656 Protein of unknown function (DUF805) CF57_RS22720 PF07305 Protein of unknown function (DUF1454) CF57_RS22725 PF00121 Triosephosphate isomerase CF57_RS22730 PF02611 CDP-diacylglycerol pyrophosphatase CF57_RS22740 PF00365 Phosphofructokinase CF57_RS22745 PF01545 Cation efflux family CF57_RS22745 PF16916 Dimerisation domain of Zinc Transporter CF57_RS22750 PF07813 LTXXQ motif family protein CF57_RS22755 PF00072 Response regulator receiver domain CF57_RS22755 PF00486 Transcriptional regulatory protein, C terminal CF57_RS22760 PF16527 Two-component sensor protein CpxA, periplasmic domain CF57_RS22760 PF00672 HAMP domain CF57_RS22760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS22760 PF00512 His Kinase A (phospho-acceptor) domain CF57_RS22765 PF03475 3-alpha domain CF57_RS22765 PF03473 MOSC domain CF57_RS22770 PF03812 2-keto-3-deoxygluconate permease CF57_RS22780 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CF57_RS22780 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CF57_RS22785 PF06379 L-rhamnose-proton symport protein (RhaT) CF57_RS22790 PF12833 Helix-turn-helix domain CF57_RS22790 PF02311 AraC-like ligand binding domain CF57_RS22795 PF12833 Helix-turn-helix domain CF57_RS22795 PF02311 AraC-like ligand binding domain CF57_RS22805 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CF57_RS22805 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CF57_RS22810 PF06134 L-rhamnose isomerase (RhaA) CF57_RS22815 PF00596 Class II Aldolase and Adducin N-terminal domain CF57_RS22820 PF05336 L-rhamnose mutarotase CF57_RS22830 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF57_RS22835 PF02378 Phosphotransferase system, EIIC CF57_RS22835 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF57_RS22840 PF05343 M42 glutamyl aminopeptidase CF57_RS22845 PF08279 HTH domain CF57_RS22845 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF57_RS22850 PF12889 Protein of unknown function (DUF3829) CF57_RS22855 PF02634 FdhD/NarQ family CF57_RS22860 PF01568 Molydopterin dinucleotide binding domain CF57_RS22860 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF57_RS22860 PF00384 Molybdopterin oxidoreductase CF57_RS22865 PF00384 Molybdopterin oxidoreductase CF57_RS22865 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF57_RS22865 PF01568 Molydopterin dinucleotide binding domain CF57_RS22870 PF09163 Formate dehydrogenase N, transmembrane CF57_RS22870 PF13247 4Fe-4S dicluster domain CF57_RS22875 PF01292 Prokaryotic cytochrome b561 CF57_RS22880 PF04216 Protein involved in formate dehydrogenase formation CF57_RS22895 PF01402 Ribbon-helix-helix protein, copG family CF57_RS22900 PF00583 Acetyltransferase (GNAT) family CF57_RS22900 PF09500 Putative thioesterase (yiiD_Cterm) CF57_RS22905 PF02580 D-Tyr-tRNA(Tyr) deacylase CF57_RS22910 PF03631 Virulence factor BrkB CF57_RS22915 PF13419 Haloacid dehalogenase-like hydrolase CF57_RS22920 PF08220 DeoR-like helix-turn-helix domain CF57_RS22920 PF00455 DeoR C terminal sensor domain CF57_RS22925 PF00294 pfkB family carbohydrate kinase CF57_RS22930 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CF57_RS22930 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CF57_RS22935 PF01791 DeoC/LacD family aldolase CF57_RS22945 PF01263 Aldose 1-epimerase CF57_RS22950 PF12759 InsA C-terminal domain CF57_RS22950 PF03811 InsA N-terminal domain CF57_RS22955 PF06178 Oligogalacturonate-specific porin protein (KdgM) CF57_RS22960 PF07690 Major Facilitator Superfamily CF57_RS22965 PF01261 Xylose isomerase-like TIM barrel CF57_RS22970 PF07702 UTRA domain CF57_RS22970 PF00392 Bacterial regulatory proteins, gntR family CF57_RS22975 PF00679 Elongation factor G C-terminus CF57_RS22975 PF00009 Elongation factor Tu GTP binding domain CF57_RS22975 PF03144 Elongation factor Tu domain 2 CF57_RS22985 PF00120 Glutamine synthetase, catalytic domain CF57_RS22985 PF03951 Glutamine synthetase, beta-Grasp domain CF57_RS22990 PF00512 His Kinase A (phospho-acceptor) domain CF57_RS22990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF57_RS22990 PF00989 PAS fold CF57_RS22995 PF00072 Response regulator receiver domain CF57_RS22995 PF02954 Bacterial regulatory protein, Fis family CF57_RS22995 PF00158 Sigma-54 interaction domain CF57_RS23005 PF04055 Radical SAM superfamily CF57_RS23005 PF06969 HemN C-terminal domain CF57_RS23010 PF04220 Der GTPase activator (YihI) CF57_RS23015 PF01926 50S ribosome-binding GTPase CF57_RS23020 PF01612 3'-5' exonuclease CF57_RS23020 PF00476 DNA polymerase family A CF57_RS23020 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CF57_RS23020 PF01367 5'-3' exonuclease, C-terminal SAM fold CF57_RS23030 PF01553 Acyltransferase CF57_RS23035 PF06097 Bacterial protein of unknown function (DUF945) CF57_RS23040 PF01323 DSBA-like thioredoxin domain CF57_RS23045 PF01636 Phosphotransferase enzyme family CF57_RS23050 PF06288 Protein of unknown function (DUF1040) CF57_RS23055 PF12804 MobA-like NTP transferase domain CF57_RS23060 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CF57_RS23090 PF12724 Flavodoxin domain CF57_RS23095 PF02386 Cation transport protein CF57_RS23100 PF01205 Uncharacterized protein family UPF0029 CF57_RS23100 PF09186 Domain of unknown function (DUF1949) CF57_RS23105 PF00557 Metallopeptidase family M24 CF57_RS23110 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CF57_RS23110 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CF57_RS23110 PF00378 Enoyl-CoA hydratase/isomerase CF57_RS23115 PF00108 Thiolase, N-terminal domain CF57_RS23115 PF02803 Thiolase, C-terminal domain CF57_RS23120 PF00175 Oxidoreductase NAD-binding domain CF57_RS23120 PF00970 Oxidoreductase FAD-binding domain CF57_RS23125 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CF57_RS23130 PF02357 Transcription termination factor nusG CF57_RS23135 PF01026 TatD related DNase CF57_RS23140 PF00902 Sec-independent protein translocase protein (TatC) CF57_RS23150 PF02416 mttA/Hcf106 family CF57_RS23155 PF03109 ABC1 family CF57_RS23160 PF02036 SCP-2 sterol transfer family CF57_RS23165 PF01209 ubiE/COQ5 methyltransferase family CF57_RS23170 PF02646 RmuC family CF57_RS23175 PF01048 Phosphorylase superfamily CF57_RS23180 PF01738 Dienelactone hydrolase family CF57_RS23185 PF08267 Cobalamin-independent synthase, N-terminal domain CF57_RS23185 PF01717 Cobalamin-independent synthase, Catalytic domain CF57_RS23190 PF03466 LysR substrate binding domain CF57_RS23190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS23195 PF00892 EamA-like transporter family CF57_RS23205 PF12146 Serine aminopeptidase, S33 CF57_RS23210 PF01810 LysE type translocator CF57_RS23215 PF01810 LysE type translocator CF57_RS23220 PF00270 DEAD/DEAH box helicase CF57_RS23220 PF00271 Helicase conserved C-terminal domain CF57_RS23220 PF00570 HRDC domain CF57_RS23220 PF16124 RecQ zinc-binding CF57_RS23220 PF09382 RQC domain CF57_RS23225 PF02253 Phospholipase A1 CF57_RS23230 PF03061 Thioesterase superfamily CF57_RS23235 PF00892 EamA-like transporter family CF57_RS23245 PF10947 Protein of unknown function (DUF2628) CF57_RS23250 PF01544 CorA-like Mg2+ transporter protein CF57_RS23255 PF09992 Phosphodiester glycosidase CF57_RS23260 PF13361 UvrD-like helicase C-terminal domain CF57_RS23260 PF00580 UvrD/REP helicase N-terminal domain CF57_RS23265 PF13419 Haloacid dehalogenase-like hydrolase CF57_RS23270 PF02899 Phage integrase, N-terminal SAM-like domain CF57_RS23270 PF00589 Phage integrase family CF57_RS23275 PF04340 Protein of unknown function, DUF484 CF57_RS23280 PF01678 Diaminopimelate epimerase CF57_RS23285 PF13627 Prokaryotic lipoprotein-attachment site CF57_RS23290 PF01491 Frataxin-like domain CF57_RS23295 PF12633 Adenylate cyclase NT domain CF57_RS23295 PF01295 Adenylate cyclase, class-I CF57_RS23300 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CF57_RS23300 PF03900 Porphobilinogen deaminase, C-terminal domain CF57_RS23305 PF02602 Uroporphyrinogen-III synthase HemD CF57_RS23310 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CF57_RS23315 PF07219 HemY protein N-terminus CF57_RS23315 PF07719 Tetratricopeptide repeat CF57_RS23320 PF00884 Sulfatase CF57_RS23325 PF04055 Radical SAM superfamily CF57_RS23325 PF13186 Iron-sulfur cluster-binding domain CF57_RS23350 PF00324 Amino acid permease CF57_RS23355 PF03808 Glycosyl transferase WecB/TagA/CpsF family CF57_RS23360 PF06899 WzyE protein, O-antigen assembly polymerase CF57_RS23365 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 CF57_RS23370 PF01943 Polysaccharide biosynthesis protein CF57_RS23375 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CF57_RS23385 PF00483 Nucleotidyl transferase CF57_RS23390 PF16363 GDP-mannose 4,6 dehydratase CF57_RS23395 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CF57_RS23395 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CF57_RS23395 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CF57_RS23400 PF02350 UDP-N-acetylglucosamine 2-epimerase CF57_RS23405 PF02706 Chain length determinant protein CF57_RS23410 PF00953 Glycosyl transferase family 4 CF57_RS23420 PF07497 Rho termination factor, RNA-binding domain CF57_RS23420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CF57_RS23420 PF07498 Rho termination factor, N-terminal domain CF57_RS23430 PF00085 Thioredoxin CF57_RS23435 PF00270 DEAD/DEAH box helicase CF57_RS23435 PF00271 Helicase conserved C-terminal domain CF57_RS23440 PF02541 Ppx/GppA phosphatase family CF57_RS23445 PF13361 UvrD-like helicase C-terminal domain CF57_RS23445 PF00580 UvrD/REP helicase N-terminal domain CF57_RS23450 PF01527 Transposase CF57_RS23455 PF13276 HTH-like domain CF57_RS23455 PF00665 Integrase core domain CF57_RS23470 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CF57_RS23470 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CF57_RS23475 PF03466 LysR substrate binding domain CF57_RS23475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS23480 PF00291 Pyridoxal-phosphate dependent enzyme CF57_RS23480 PF00585 C-terminal regulatory domain of Threonine dehydratase CF57_RS23485 PF00920 Dehydratase family CF57_RS23490 PF01063 Amino-transferase class IV CF57_RS23500 PF00205 Thiamine pyrophosphate enzyme, central domain CF57_RS23500 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CF57_RS23500 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CF57_RS23505 PF08046 IlvGEDA operon leader peptide CF57_RS23510 PF13335 Magnesium chelatase, subunit ChlI C-terminal CF57_RS23510 PF01078 Magnesium chelatase, subunit ChlI CF57_RS23515 PF04219 Protein of unknown function, DUF CF57_RS23520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS23520 PF03466 LysR substrate binding domain CF57_RS23545 PF13673 Acetyltransferase (GNAT) domain CF57_RS23580 PF01808 AICARFT/IMPCHase bienzyme CF57_RS23580 PF02142 MGS-like domain CF57_RS23620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS23620 PF03466 LysR substrate binding domain CF57_RS23625 PF04219 Protein of unknown function, DUF CF57_RS23635 PF00294 pfkB family carbohydrate kinase CF57_RS23640 PF00356 Bacterial regulatory proteins, lacI family CF57_RS23645 PF07690 Major Facilitator Superfamily CF57_RS23650 PF07729 FCD domain CF57_RS23650 PF00392 Bacterial regulatory proteins, gntR family CF57_RS23680 PF00083 Sugar (and other) transporter CF57_RS23685 PF10043 Predicted periplasmic lipoprotein (DUF2279) CF57_RS23690 PF13091 PLD-like domain CF57_RS23705 PF00085 Thioredoxin CF57_RS23715 PF00239 Resolvase, N terminal domain CF57_RS23715 PF02796 Helix-turn-helix domain of resolvase CF57_RS23735 PF07690 Major Facilitator Superfamily CF57_RS23740 PF00356 Bacterial regulatory proteins, lacI family CF57_RS23745 PF00294 pfkB family carbohydrate kinase CF57_RS23750 PF13407 Periplasmic binding protein domain CF57_RS23755 PF02653 Branched-chain amino acid transport system / permease component CF57_RS23760 PF00005 ABC transporter CF57_RS23765 PF05025 RbsD / FucU transport protein family CF57_RS23770 PF02705 K+ potassium transporter CF57_RS23775 PF17868 AAA lid domain CF57_RS23775 PF07728 AAA domain (dynein-related subfamily) CF57_RS23775 PF12592 Protein of unknown function (DUF3763) CF57_RS23780 PF05762 VWA domain containing CoxE-like protein CF57_RS23785 PF03590 Aspartate-ammonia ligase CF57_RS23790 PF01037 Lrp/AsnC ligand binding domain CF57_RS23795 PF00258 Flavodoxin CF57_RS23800 PF13932 GidA associated domain CF57_RS23800 PF01134 Glucose inhibited division protein A CF57_RS23805 PF02527 rRNA small subunit methyltransferase G CF57_RS23810 PF03899 ATP synthase I chain CF57_RS23815 PF00119 ATP synthase A chain CF57_RS23820 PF00137 ATP synthase subunit C CF57_RS23825 PF00430 ATP synthase B/B' CF(0) CF57_RS23830 PF00213 ATP synthase delta (OSCP) subunit CF57_RS23835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CF57_RS23835 PF02874 ATP synthase alpha/beta family, beta-barrel domain CF57_RS23835 PF00306 ATP synthase alpha/beta chain, C terminal domain CF57_RS23840 PF00231 ATP synthase CF57_RS23845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CF57_RS23845 PF02874 ATP synthase alpha/beta family, beta-barrel domain CF57_RS23850 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CF57_RS23850 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CF57_RS23855 PF12804 MobA-like NTP transferase domain CF57_RS23855 PF14602 Hexapeptide repeat of succinyl-transferase CF57_RS23855 PF00132 Bacterial transferase hexapeptide (six repeats) CF57_RS23860 PF01380 SIS domain CF57_RS23865 PF12849 PBP superfamily domain CF57_RS23870 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS23875 PF00528 Binding-protein-dependent transport system inner membrane component CF57_RS23880 PF00005 ABC transporter CF57_RS23885 PF01895 PhoU domain CF57_RS23890 PF03123 CAT RNA binding domain CF57_RS23890 PF00874 PRD domain CF57_RS23895 PF00367 phosphotransferase system, EIIB CF57_RS23895 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CF57_RS23895 PF02378 Phosphotransferase system, EIIC CF57_RS23900 PF00232 Glycosyl hydrolase family 1 CF57_RS23905 PF02264 LamB porin CF57_RS23905 PF11471 Maltoporin periplasmic N-terminal extension CF57_RS23910 PF00756 Putative esterase CF57_RS23910 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CF57_RS23915 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CF57_RS23920 PF03691 Uncharacterised protein family (UPF0167) CF57_RS23935 PF13419 Haloacid dehalogenase-like hydrolase CF57_RS23940 PF00860 Permease family CF57_RS23945 PF03358 NADPH-dependent FMN reductase CF57_RS23955 PF03466 LysR substrate binding domain CF57_RS23955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF57_RS23960 PF07690 Major Facilitator Superfamily CF57_RS23965 PF03222 Tryptophan/tyrosine permease family CF57_RS23970 PF01212 Beta-eliminating lyase CF57_RS23975 PF08053 Tryptophanase operon leader peptide CF57_RS23980 PF10396 GTP-binding protein TrmE N-terminus CF57_RS23980 PF01926 50S ribosome-binding GTPase CF57_RS23980 PF12631 MnmE helical domain CF57_RS23985 PF02096 60Kd inner membrane protein CF57_RS23985 PF14849 YidC periplasmic domain CF57_RS23990 PF01809 Putative membrane protein insertion efficiency factor CF57_RS23995 PF00825 Ribonuclease P CF57_RS24000 PF00468 Ribosomal protein L34 CF57_RS24050 PF13940 Toxin Ldr, type I toxin-antitoxin system CF57_RS24065 PF01554 MatE CF57_RS24070 PF01554 MatE CF57_RS24075 PF03527 RHS protein CF57_RS24095 PF01032 FecCD transport family CF57_RS24100 PF01032 FecCD transport family CF57_RS24120 PF12759 InsA C-terminal domain CF57_RS24120 PF03811 InsA N-terminal domain