locus-tag class description CF61_RS00005 PF11638 DnaA N-terminal domain CF61_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CF61_RS00005 PF00308 Bacterial dnaA protein CF61_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CF61_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CF61_RS00010 PF02767 DNA polymerase III beta subunit, central domain CF61_RS00015 PF02463 RecF/RecN/SMC N terminal domain CF61_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus CF61_RS00020 PF18053 DNA gyrase B subunit insert domain CF61_RS00020 PF01751 Toprim domain CF61_RS00020 PF00204 DNA gyrase B CF61_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS00030 PF06078 Bacterial protein of unknown function (DUF937) CF61_RS00045 PF07729 FCD domain CF61_RS00045 PF00392 Bacterial regulatory proteins, gntR family CF61_RS00050 PF05035 2-keto-3-deoxy-galactonokinase CF61_RS00055 PF01081 KDPG and KHG aldolase CF61_RS00060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CF61_RS00060 PF13378 Enolase C-terminal domain-like CF61_RS00065 PF07690 Major Facilitator Superfamily CF61_RS00070 PF01494 FAD binding domain CF61_RS00075 PF12566 Protein of unknown function (DUF3748) CF61_RS00075 PF07676 WD40-like Beta Propeller Repeat CF61_RS00080 PF07119 Protein of unknown function (DUF1375) CF61_RS00085 PF00011 Hsp20/alpha crystallin family CF61_RS00090 PF00011 Hsp20/alpha crystallin family CF61_RS00095 PF06826 Predicted Permease Membrane Region CF61_RS00095 PF02080 TrkA-C domain CF61_RS00100 PF07702 UTRA domain CF61_RS00100 PF00392 Bacterial regulatory proteins, gntR family CF61_RS00105 PF00367 phosphotransferase system, EIIB CF61_RS00105 PF02378 Phosphotransferase system, EIIC CF61_RS00110 PF02056 Family 4 glycosyl hydrolase CF61_RS00110 PF11975 Family 4 glycosyl hydrolase C-terminal domain CF61_RS00120 PF07282 Putative transposase DNA-binding domain CF61_RS00120 PF01385 Probable transposase CF61_RS00120 PF12323 Helix-turn-helix domain CF61_RS00125 PF02656 Domain of unknown function (DUF202) CF61_RS00130 PF02656 Domain of unknown function (DUF202) CF61_RS00140 PF07690 Major Facilitator Superfamily CF61_RS00145 PF13939 Toxin TisB, type I toxin-antitoxin system CF61_RS00160 PF00205 Thiamine pyrophosphate enzyme, central domain CF61_RS00160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CF61_RS00160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CF61_RS00165 PF01842 ACT domain CF61_RS00170 PF00196 Bacterial regulatory proteins, luxR family CF61_RS00170 PF00072 Response regulator receiver domain CF61_RS00175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS00175 PF07730 Histidine kinase CF61_RS00175 PF05231 MASE1 CF61_RS00180 PF07690 Major Facilitator Superfamily CF61_RS00185 PF07690 Major Facilitator Superfamily CF61_RS00190 PF01979 Amidohydrolase family CF61_RS00190 PF13382 Adenine deaminase C-terminal domain CF61_RS00195 PF00860 Permease family CF61_RS00200 PF06711 Protein of unknown function (DUF1198) CF61_RS00205 PF07690 Major Facilitator Superfamily CF61_RS00220 PF03180 NLPA lipoprotein CF61_RS00225 PF00892 EamA-like transporter family CF61_RS00230 PF07690 Major Facilitator Superfamily CF61_RS00250 PF01055 Glycosyl hydrolases family 31 CF61_RS00250 PF13802 Galactose mutarotase-like CF61_RS00255 PF05170 AsmA family CF61_RS00260 PF00860 Permease family CF61_RS00265 PF03616 Sodium/glutamate symporter CF61_RS00270 PF00270 DEAD/DEAH box helicase CF61_RS00270 PF00271 Helicase conserved C-terminal domain CF61_RS00270 PF17191 RecG wedge domain CF61_RS00275 PF12105 SpoU, rRNA methylase, C-terminal CF61_RS00275 PF00588 SpoU rRNA Methylase family CF61_RS00280 PF04607 Region found in RelA / SpoT proteins CF61_RS00280 PF13291 ACT domain CF61_RS00280 PF02824 TGS domain CF61_RS00285 PF01192 RNA polymerase Rpb6 CF61_RS00290 PF00625 Guanylate kinase CF61_RS00295 PF01653 NAD-dependent DNA ligase adenylation domain CF61_RS00295 PF03120 NAD-dependent DNA ligase OB-fold domain CF61_RS00300 PF03458 UPF0126 domain CF61_RS00310 PF03755 YicC-like family, N-terminal region CF61_RS00310 PF08340 Domain of unknown function (DUF1732) CF61_RS00315 PF03725 3' exoribonuclease family, domain 2 CF61_RS00315 PF01138 3' exoribonuclease family, domain 1 CF61_RS00320 PF00156 Phosphoribosyl transferase domain CF61_RS00325 PF00440 Bacterial regulatory proteins, tetR family CF61_RS00330 PF00692 dUTPase CF61_RS00335 PF02441 Flavoprotein CF61_RS00335 PF04127 DNA / pantothenate metabolism flavoprotein CF61_RS00340 PF04002 RadC-like JAB domain CF61_RS00345 PF00830 Ribosomal L28 family CF61_RS00350 PF00471 Ribosomal protein L33 CF61_RS00355 PF06827 Zinc finger found in FPG and IleRS CF61_RS00355 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CF61_RS00355 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CF61_RS00360 PF01467 Cytidylyltransferase-like CF61_RS00365 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CF61_RS00370 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CF61_RS00375 PF13439 Glycosyltransferase Family 4 CF61_RS00375 PF00534 Glycosyl transferases group 1 CF61_RS00390 PF01501 Glycosyl transferase family 8 CF61_RS00390 PF08437 Glycosyl transferase family 8 C-terminal CF61_RS00395 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) CF61_RS00430 PF01218 Coproporphyrinogen III oxidase CF61_RS00465 PF04346 Ethanolamine utilisation protein, EutH CF61_RS00475 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CF61_RS00490 PF07043 Protein of unknown function (DUF1328) CF61_RS00495 PF04972 BON domain CF61_RS00500 PF00009 Elongation factor Tu GTP binding domain CF61_RS00500 PF16658 Class II release factor RF3, C-terminal domain CF61_RS00500 PF03144 Elongation factor Tu domain 2 CF61_RS00505 PF13419 Haloacid dehalogenase-like hydrolase CF61_RS00510 PF00583 Acetyltransferase (GNAT) family CF61_RS00515 PF03603 DNA polymerase III psi subunit CF61_RS00520 PF08468 Methyltransferase small domain N-terminal CF61_RS00520 PF05175 Methyltransferase small domain CF61_RS00545 PF07256 Protein of unknown function (DUF1435) CF61_RS00555 PF11575 FhuF 2Fe-2S C-terminal domain CF61_RS00555 PF06276 Ferric iron reductase FhuF-like transporter CF61_RS00610 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain CF61_RS00610 PF00589 Phage integrase family CF61_RS00650 PF00436 Single-strand binding protein family CF61_RS00655 PF04098 Rad52/22 family double-strand break repair protein CF61_RS00730 PF00005 ABC transporter CF61_RS00730 PF09383 NIL domain CF61_RS00735 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS00745 PF16358 RcsF lipoprotein CF61_RS00750 PF01980 tRNA-methyltransferase O CF61_RS00750 PF18389 TrmO C-terminal domain CF61_RS00755 PF04073 Aminoacyl-tRNA editing domain CF61_RS00755 PF03129 Anticodon binding domain CF61_RS00755 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CF61_RS00760 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CF61_RS00770 PF03350 Uncharacterized protein family, UPF0114 CF61_RS00790 PF11115 Protein of unknown function (DUF2623) CF61_RS00800 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CF61_RS00800 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CF61_RS00805 PF13247 4Fe-4S dicluster domain CF61_RS00820 PF00374 Nickel-dependent hydrogenase CF61_RS00825 PF03916 Polysulphide reductase, NrfD CF61_RS00830 PF13247 4Fe-4S dicluster domain CF61_RS00850 PF02774 Semialdehyde dehydrogenase, dimerisation domain CF61_RS00850 PF01118 Semialdehyde dehydrogenase, NAD binding domain CF61_RS00900 PF04204 Homoserine O-succinyltransferase CF61_RS00930 PF01501 Glycosyl transferase family 8 CF61_RS00930 PF08437 Glycosyl transferase family 8 C-terminal CF61_RS00935 PF00535 Glycosyl transferase family 2 CF61_RS00940 PF04932 O-Antigen ligase CF61_RS00945 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CF61_RS00950 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CF61_RS00955 PF01370 NAD dependent epimerase/dehydratase family CF61_RS00960 PF00155 Aminotransferase class I and II CF61_RS00965 PF08240 Alcohol dehydrogenase GroES-like domain CF61_RS00965 PF00107 Zinc-binding dehydrogenase CF61_RS00970 PF00535 Glycosyl transferase family 2 CF61_RS00975 PF04748 Divergent polysaccharide deacetylase CF61_RS00980 PF01551 Peptidase family M23 CF61_RS00985 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CF61_RS00985 PF01676 Metalloenzyme superfamily CF61_RS00990 PF00581 Rhodanese-like domain CF61_RS00995 PF00462 Glutaredoxin CF61_RS01000 PF02556 Preprotein translocase subunit SecB CF61_RS01005 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CF61_RS01005 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CF61_RS01010 PF00132 Bacterial transferase hexapeptide (six repeats) CF61_RS01010 PF06426 Serine acetyltransferase, N-terminal CF61_RS01015 PF00588 SpoU rRNA Methylase family CF61_RS01020 PF01070 FMN-dependent dehydrogenase CF61_RS01025 PF00392 Bacterial regulatory proteins, gntR family CF61_RS01025 PF07729 FCD domain CF61_RS01030 PF02652 L-lactate permease CF61_RS01035 PF05662 Coiled stalk of trimeric autotransporter adhesin CF61_RS01035 PF13018 Extended Signal Peptide of Type V secretion system CF61_RS01035 PF05658 Head domain of trimeric autotransporter adhesin CF61_RS01035 PF03895 YadA-like membrane anchor domain CF61_RS01040 PF11622 Protein of unknown function (DUF3251) CF61_RS01045 PF10928 Protein of unknown function (DUF2810) CF61_RS01055 PF05068 Mannitol repressor CF61_RS01060 PF01232 Mannitol dehydrogenase Rossmann domain CF61_RS01060 PF08125 Mannitol dehydrogenase C-terminal domain CF61_RS01065 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF61_RS01065 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF61_RS01065 PF02378 Phosphotransferase system, EIIC CF61_RS01070 PF11742 Protein of unknown function (DUF3302) CF61_RS01075 PF00529 HlyD membrane-fusion protein of T1SS CF61_RS01075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF61_RS01080 PF15596 Immunity protein 57 CF61_RS01090 PF03527 RHS protein CF61_RS01095 PF03130 PBS lyase HEAT-like repeat CF61_RS01100 PF05593 RHS Repeat CF61_RS01100 PF03527 RHS protein CF61_RS01100 PF15606 Bacterial toxin 34 CF61_RS01105 PF13417 Glutathione S-transferase, N-terminal domain CF61_RS01105 PF00043 Glutathione S-transferase, C-terminal domain CF61_RS01110 PF03841 L-seryl-tRNA selenium transferase CF61_RS01110 PF12390 Selenocysteine synthase N terminal CF61_RS01115 PF03144 Elongation factor Tu domain 2 CF61_RS01115 PF09107 Elongation factor SelB, winged helix CF61_RS01115 PF09106 Elongation factor SelB, winged helix CF61_RS01115 PF00009 Elongation factor Tu GTP binding domain CF61_RS01120 PF00465 Iron-containing alcohol dehydrogenase CF61_RS01125 PF00171 Aldehyde dehydrogenase family CF61_RS01135 PF11742 Protein of unknown function (DUF3302) CF61_RS01140 PF00529 HlyD membrane-fusion protein of T1SS CF61_RS01140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF61_RS01145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS01145 PF03466 LysR substrate binding domain CF61_RS01150 PF06629 MltA-interacting protein MipA CF61_RS01155 PF07944 Beta-L-arabinofuranosidase, GH127 CF61_RS01170 PF00596 Class II Aldolase and Adducin N-terminal domain CF61_RS01175 PF01261 Xylose isomerase-like TIM barrel CF61_RS01180 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CF61_RS01185 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CF61_RS01185 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CF61_RS01190 PF03480 Bacterial extracellular solute-binding protein, family 7 CF61_RS01195 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CF61_RS01200 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CF61_RS01205 PF04074 YhcH/YjgK/YiaL CF61_RS01210 PF02615 Malate/L-lactate dehydrogenase CF61_RS01215 PF01614 Bacterial transcriptional regulator CF61_RS01215 PF09339 IclR helix-turn-helix domain CF61_RS01220 PF13247 4Fe-4S dicluster domain CF61_RS01230 PF00155 Aminotransferase class I and II CF61_RS01235 PF00128 Alpha amylase, catalytic domain CF61_RS01240 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CF61_RS01245 PF12833 Helix-turn-helix domain CF61_RS01250 PF02653 Branched-chain amino acid transport system / permease component CF61_RS01255 PF00005 ABC transporter CF61_RS01260 PF13407 Periplasmic binding protein domain CF61_RS01270 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CF61_RS01270 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CF61_RS01275 PF05360 yiaA/B two helix domain CF61_RS01280 PF05360 yiaA/B two helix domain CF61_RS01285 PF01757 Acyltransferase family CF61_RS01290 PF13983 YsaB-like lipoprotein CF61_RS01295 PF02091 Glycyl-tRNA synthetase alpha subunit CF61_RS01300 PF05746 DALR anticodon binding domain CF61_RS01300 PF02092 Glycyl-tRNA synthetase beta subunit CF61_RS01310 PF00665 Integrase core domain CF61_RS01310 PF13276 HTH-like domain CF61_RS01310 PF13333 Integrase core domain CF61_RS01315 PF01848 Hok/gef family CF61_RS01320 PF00313 'Cold-shock' DNA-binding domain CF61_RS01325 PF01381 Helix-turn-helix CF61_RS01330 PF11254 Protein of unknown function (DUF3053) CF61_RS01335 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CF61_RS01335 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CF61_RS01340 PF13488 Glycine zipper CF61_RS01340 PF00691 OmpA family CF61_RS01345 PF00384 Molybdopterin oxidoreductase CF61_RS01345 PF18364 Molybdopterin oxidoreductase N-terminal domain CF61_RS01345 PF01568 Molydopterin dinucleotide binding domain CF61_RS01350 PF00583 Acetyltransferase (GNAT) family CF61_RS01355 PF03352 Methyladenine glycosylase CF61_RS01360 PF03797 Autotransporter beta-domain CF61_RS01365 PF07690 Major Facilitator Superfamily CF61_RS01370 PF08019 Phosphoethanolamine transferase EptA/EptB CF61_RS01370 PF00884 Sulfatase CF61_RS01385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF61_RS01395 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS01400 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS01400 PF12911 N-terminal TM domain of oligopeptide transport permease C CF61_RS01405 PF00005 ABC transporter CF61_RS01405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF61_RS01410 PF00005 ABC transporter CF61_RS01410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF61_RS01415 PF03222 Tryptophan/tyrosine permease family CF61_RS01430 PF11658 Cellulose biosynthesis protein BcsG CF61_RS01435 PF11120 Cellulose biosynthesis protein BcsF CF61_RS01440 PF10995 Cellulose biosynthesis GIL CF61_RS01455 PF10995 Cellulose biosynthesis GIL CF61_RS01460 PF10945 Cellulose biosynthesis protein BcsR CF61_RS01465 PF06564 Cellulose biosynthesis protein BcsQ CF61_RS01470 PF03552 Cellulose synthase CF61_RS01470 PF00535 Glycosyl transferase family 2 CF61_RS01470 PF07238 PilZ domain CF61_RS01475 PF03170 Bacterial cellulose synthase subunit CF61_RS01480 PF01270 Glycosyl hydrolases family 8 CF61_RS01485 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CF61_RS01490 PF17154 Gammaproteobacterial periplasmic sensor domain CF61_RS01490 PF00563 EAL domain CF61_RS01490 PF00990 Diguanylate cyclase, GGDEF domain CF61_RS01490 PF00672 HAMP domain CF61_RS01495 PF00375 Sodium:dicarboxylate symporter family CF61_RS01500 PF00675 Insulinase (Peptidase family M16) CF61_RS01500 PF05193 Peptidase M16 inactive domain CF61_RS01505 PF00294 pfkB family carbohydrate kinase CF61_RS01515 PF00563 EAL domain CF61_RS01520 PF05170 AsmA family CF61_RS01525 PF07690 Major Facilitator Superfamily CF61_RS01525 PF00083 Sugar (and other) transporter CF61_RS01530 PF03631 Virulence factor BrkB CF61_RS01535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS01535 PF03466 LysR substrate binding domain CF61_RS01540 PF00196 Bacterial regulatory proteins, luxR family CF61_RS01545 PF01204 Trehalase CF61_RS01550 PF14376 Haem-binding domain CF61_RS01550 PF00034 Cytochrome c CF61_RS01550 PF03150 Di-haem cytochrome c peroxidase CF61_RS01555 PF03811 InsA N-terminal domain CF61_RS01555 PF12759 InsA C-terminal domain CF61_RS01560 PF03400 IS1 transposase CF61_RS01565 PF03150 Di-haem cytochrome c peroxidase CF61_RS01565 PF00034 Cytochrome c CF61_RS01565 PF14376 Haem-binding domain CF61_RS01570 PF00282 Pyridoxal-dependent decarboxylase conserved domain CF61_RS01575 PF03400 IS1 transposase CF61_RS01580 PF12833 Helix-turn-helix domain CF61_RS01585 PF12833 Helix-turn-helix domain CF61_RS01590 PF00873 AcrB/AcrD/AcrF family CF61_RS01595 PF00529 HlyD membrane-fusion protein of T1SS CF61_RS01595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF61_RS01605 PF00196 Bacterial regulatory proteins, luxR family CF61_RS01610 PF03729 Short repeat of unknown function (DUF308) CF61_RS01615 PF06411 HdeA/HdeB family CF61_RS01620 PF06411 HdeA/HdeB family CF61_RS01625 PF02308 MgtC family CF61_RS01630 PF00196 Bacterial regulatory proteins, luxR family CF61_RS01635 PF03843 Outer membrane lipoprotein Slp family CF61_RS01645 PF03960 ArsC family CF61_RS01650 PF02040 Arsenical pump membrane protein CF61_RS01655 PF01022 Bacterial regulatory protein, arsR family CF61_RS01670 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF61_RS01670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CF61_RS01675 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CF61_RS01680 PF01432 Peptidase family M3 CF61_RS01685 PF04445 Putative SAM-dependent methyltransferase CF61_RS01690 PF00854 POT family CF61_RS01695 PF00582 Universal stress protein family CF61_RS01700 PF10625 Universal stress protein B (UspB) CF61_RS01705 PF01384 Phosphate transporter family CF61_RS01715 PF08721 TnsA endonuclease C terminal CF61_RS01715 PF08722 TnsA endonuclease N terminal CF61_RS01720 PF01527 Transposase CF61_RS01725 PF13276 HTH-like domain CF61_RS01725 PF00665 Integrase core domain CF61_RS01725 PF13333 Integrase core domain CF61_RS01740 PF11426 Tn7 transposition regulator TnsC CF61_RS01740 PF13401 AAA domain CF61_RS01755 PF10951 Protein of unknown function (DUF2776) CF61_RS01775 PF13258 Domain of unknown function (DUF4049) CF61_RS01780 PF13533 Biotin-lipoyl like CF61_RS01785 PF00005 ABC transporter CF61_RS01795 PF13808 DDE_Tnp_1-associated CF61_RS01795 PF01609 Transposase DDE domain CF61_RS01805 PF15631 NTF2 fold immunity protein CF61_RS01810 PF03527 RHS protein CF61_RS01810 PF05593 RHS Repeat CF61_RS01810 PF14220 Domain of unknown function (DUF4329) CF61_RS01815 PF01402 Ribbon-helix-helix protein, copG family CF61_RS01815 PF08753 NikR C terminal nickel binding domain CF61_RS01820 PF00005 ABC transporter CF61_RS01825 PF00005 ABC transporter CF61_RS01830 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS01835 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS01840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF61_RS01845 PF01648 4'-phosphopantetheinyl transferase superfamily CF61_RS01850 PF01594 AI-2E family transporter CF61_RS01855 PF07690 Major Facilitator Superfamily CF61_RS01860 PF08786 DcrB CF61_RS01865 PF02592 Putative vitamin uptake transporter CF61_RS01870 PF01206 Sulfurtransferase TusA CF61_RS01875 PF00403 Heavy-metal-associated domain CF61_RS01880 PF07947 YhhN family CF61_RS01885 PF10694 Protein of unknown function (DUF2500) CF61_RS01890 PF06611 Protein of unknown function (DUF1145) CF61_RS01900 PF00448 SRP54-type protein, GTPase domain CF61_RS01900 PF02881 SRP54-type protein, helical bundle domain CF61_RS01905 PF00005 ABC transporter CF61_RS01910 PF02687 FtsX-like permease family CF61_RS01910 PF18075 FtsX extracellular domain CF61_RS01915 PF04542 Sigma-70 region 2 CF61_RS01915 PF04545 Sigma-70, region 4 CF61_RS01920 PF13458 Periplasmic binding protein CF61_RS01930 PF12568 Acetyltransferase (GNAT) domain, PanZ CF61_RS01935 PF13458 Periplasmic binding protein CF61_RS01940 PF02653 Branched-chain amino acid transport system / permease component CF61_RS01945 PF11862 Domain of unknown function (DUF3382) CF61_RS01945 PF02653 Branched-chain amino acid transport system / permease component CF61_RS01950 PF12399 Branched-chain amino acid ATP-binding cassette transporter CF61_RS01950 PF00005 ABC transporter CF61_RS01955 PF00005 ABC transporter CF61_RS01965 PF13416 Bacterial extracellular solute-binding protein CF61_RS01970 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS01975 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS01980 PF17912 MalK OB fold domain CF61_RS01980 PF00005 ABC transporter CF61_RS01985 PF03009 Glycerophosphoryl diester phosphodiesterase family CF61_RS01990 PF10956 Protein of unknown function (DUF2756) CF61_RS02000 PF15567 Immunity protein 35 CF61_RS02010 PF05638 Type VI secretion system effector, Hcp CF61_RS02015 PF00583 Acetyltransferase (GNAT) family CF61_RS02020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CF61_RS02020 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CF61_RS02025 PF02678 Pirin CF61_RS02025 PF17954 Quercetinase C-terminal cupin domain CF61_RS02030 PF00356 Bacterial regulatory proteins, lacI family CF61_RS02030 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CF61_RS02035 PF01202 Shikimate kinase CF61_RS02040 PF02447 GntP family permease CF61_RS02045 PF01914 MarC family integral membrane protein CF61_RS02050 PF01118 Semialdehyde dehydrogenase, NAD binding domain CF61_RS02050 PF02774 Semialdehyde dehydrogenase, dimerisation domain CF61_RS02055 PF02806 Alpha amylase, C-terminal all-beta domain CF61_RS02055 PF00128 Alpha amylase, catalytic domain CF61_RS02055 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CF61_RS02060 PF00128 Alpha amylase, catalytic domain CF61_RS02060 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CF61_RS02060 PF18390 Glycogen debranching enzyme C-terminal domain CF61_RS02065 PF00483 Nucleotidyl transferase CF61_RS02070 PF08323 Starch synthase catalytic domain CF61_RS02070 PF00534 Glycosyl transferases group 1 CF61_RS02075 PF00343 Carbohydrate phosphorylase CF61_RS02100 PF01266 FAD dependent oxidoreductase CF61_RS02100 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CF61_RS02105 PF00581 Rhodanese-like domain CF61_RS02110 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CF61_RS02110 PF01694 Rhomboid family CF61_RS02115 PF00455 DeoR C terminal sensor domain CF61_RS02115 PF08220 DeoR-like helix-turn-helix domain CF61_RS02120 PF00158 Sigma-54 interaction domain CF61_RS02120 PF06956 Regulator of RNA terminal phosphate cyclase CF61_RS02125 PF01139 tRNA-splicing ligase RtcB CF61_RS02135 PF00196 Bacterial regulatory proteins, luxR family CF61_RS02135 PF17874 MalT-like TPR region CF61_RS02140 PF00343 Carbohydrate phosphorylase CF61_RS02145 PF02446 4-alpha-glucanotransferase CF61_RS02150 PF02447 GntP family permease CF61_RS02155 PF01521 Iron-sulphur cluster biosynthesis CF61_RS02155 PF01106 NifU-like domain CF61_RS02160 PF00156 Phosphoribosyl transferase domain CF61_RS02165 PF00561 alpha/beta hydrolase fold CF61_RS02170 PF04754 Putative transposase, YhgA-like CF61_RS02175 PF09012 FeoC like transcriptional regulator CF61_RS02180 PF07670 Nucleoside recognition CF61_RS02180 PF02421 Ferrous iron transport protein B CF61_RS02180 PF07664 Ferrous iron transport protein B C terminus CF61_RS02180 PF17910 FeoB cytosolic helical domain CF61_RS02185 PF04023 FeoA domain CF61_RS02190 PF16921 Tex protein YqgF-like domain CF61_RS02190 PF17674 HHH domain CF61_RS02190 PF00575 S1 RNA binding domain CF61_RS02190 PF09371 Tex-like protein N-terminal domain CF61_RS02195 PF03449 Transcription elongation factor, N-terminal CF61_RS02195 PF01272 Transcription elongation factor, GreA/GreB, C-term CF61_RS02200 PF00072 Response regulator receiver domain CF61_RS02200 PF00486 Transcriptional regulatory protein, C terminal CF61_RS02205 PF00512 His Kinase A (phospho-acceptor) domain CF61_RS02205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS02205 PF00672 HAMP domain CF61_RS02210 PF01293 Phosphoenolpyruvate carboxykinase CF61_RS02220 PF13687 Domain of unknown function (DUF4153) CF61_RS02225 PF01430 Hsp33 protein CF61_RS02230 PF01479 S4 domain CF61_RS02235 PF13419 Haloacid dehalogenase-like hydrolase CF61_RS02240 PF07095 Intracellular growth attenuator protein IgaA CF61_RS02245 PF00293 NUDIX domain CF61_RS02250 PF00912 Transglycosylase CF61_RS02250 PF17092 Penicillin-binding protein OB-like domain CF61_RS02250 PF00905 Penicillin binding protein transpeptidase domain CF61_RS02260 PF05137 Fimbrial assembly protein (PilN) CF61_RS02270 PF10748 DNA utilization proteins HofP CF61_RS02275 PF00263 Bacterial type II and III secretion system protein CF61_RS02275 PF03958 Bacterial type II/III secretion system short domain CF61_RS02280 PF01202 Shikimate kinase CF61_RS02285 PF01761 3-dehydroquinate synthase CF61_RS02290 PF05036 Sporulation related domain CF61_RS02295 PF02086 D12 class N6 adenine-specific DNA methyltransferase CF61_RS02300 PF00834 Ribulose-phosphate 3 epimerase family CF61_RS02305 PF13419 Haloacid dehalogenase-like hydrolase CF61_RS02310 PF00579 tRNA synthetases class I (W and Y) CF61_RS02315 PF14503 YhfZ C-terminal domain CF61_RS02315 PF14502 Helix-turn-helix domain CF61_RS02325 PF01168 Alanine racemase, N-terminal domain CF61_RS02330 PF01676 Metalloenzyme superfamily CF61_RS02335 PF02126 Phosphotriesterase family CF61_RS02340 PF10941 Protein of unknown function DUF2620 CF61_RS02345 PF10797 Protein of unknown function CF61_RS02350 PF00155 Aminotransferase class I and II CF61_RS02355 PF00392 Bacterial regulatory proteins, gntR family CF61_RS02355 PF07702 UTRA domain CF61_RS02360 PF00294 pfkB family carbohydrate kinase CF61_RS02365 PF01261 Xylose isomerase-like TIM barrel CF61_RS02370 PF01380 SIS domain CF61_RS02375 PF13520 Amino acid permease CF61_RS02380 PF13978 Protein of unknown function (DUF4223) CF61_RS02385 PF10414 Sirohaem synthase dimerisation region CF61_RS02385 PF14824 Sirohaem biosynthesis protein central CF61_RS02385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CF61_RS02390 PF01226 Formate/nitrite transporter CF61_RS02395 PF13806 Rieske-like [2Fe-2S] domain CF61_RS02400 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF61_RS02400 PF04324 BFD-like [2Fe-2S] binding domain CF61_RS02400 PF18267 Rubredoxin NAD+ reductase C-terminal domain CF61_RS02400 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CF61_RS02400 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CF61_RS02405 PF07690 Major Facilitator Superfamily CF61_RS02410 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CF61_RS02415 PF10832 Protein of unknown function (DUF2559) CF61_RS02420 PF02661 Fic/DOC family CF61_RS02425 PF00117 Glutamine amidotransferase class-I CF61_RS02430 PF00202 Aminotransferase class-III CF61_RS02435 PF12805 FUSC-like inner membrane protein yccS CF61_RS02440 PF00027 Cyclic nucleotide-binding domain CF61_RS02440 PF13545 Crp-like helix-turn-helix domain CF61_RS02450 PF02566 OsmC-like protein CF61_RS02455 PF00485 Phosphoribulokinase / Uridine kinase family CF61_RS02460 PF06794 Uncharacterised protein family (UPF0270) CF61_RS02465 PF00561 alpha/beta hydrolase fold CF61_RS02470 PF00005 ABC transporter CF61_RS02470 PF12848 ABC transporter CF61_RS02475 PF02525 Flavodoxin-like fold CF61_RS02480 PF02254 TrkA-N domain CF61_RS02480 PF00999 Sodium/hydrogen exchanger family CF61_RS02485 PF09526 Probable metal-binding protein (DUF2387) CF61_RS02490 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CF61_RS02495 PF04102 SlyX CF61_RS02500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CF61_RS02500 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CF61_RS02505 PF08348 YheO-like PAS domain CF61_RS02505 PF13309 HTH domain CF61_RS02510 PF02635 DsrE/DsrF-like family CF61_RS02515 PF02635 DsrE/DsrF-like family CF61_RS02520 PF04077 DsrH like protein CF61_RS02525 PF00164 Ribosomal protein S12/S23 CF61_RS02530 PF00177 Ribosomal protein S7p/S5e CF61_RS02535 PF00679 Elongation factor G C-terminus CF61_RS02535 PF00009 Elongation factor Tu GTP binding domain CF61_RS02535 PF14492 Elongation Factor G, domain II CF61_RS02535 PF03144 Elongation factor Tu domain 2 CF61_RS02535 PF03764 Elongation factor G, domain IV CF61_RS02540 PF03144 Elongation factor Tu domain 2 CF61_RS02540 PF03143 Elongation factor Tu C-terminal domain CF61_RS02540 PF00009 Elongation factor Tu GTP binding domain CF61_RS02545 PF02839 Carbohydrate binding domain CF61_RS02550 PF04324 BFD-like [2Fe-2S] binding domain CF61_RS02555 PF00210 Ferritin-like domain CF61_RS02560 PF01478 Type IV leader peptidase family CF61_RS02565 PF03400 IS1 transposase CF61_RS02570 PF01478 Type IV leader peptidase family CF61_RS02575 PF04612 Type II secretion system (T2SS), protein M CF61_RS02580 PF05134 Type II secretion system (T2SS), protein L CF61_RS02580 PF12693 GspL periplasmic domain CF61_RS02585 PF03934 Type II secretion system (T2SS), protein K CF61_RS02590 PF07963 Prokaryotic N-terminal methylation motif CF61_RS02590 PF11612 Type II secretion system (T2SS), protein J CF61_RS02595 PF02501 Type II secretion system (T2SS), protein I CF61_RS02595 PF07963 Prokaryotic N-terminal methylation motif CF61_RS02600 PF07963 Prokaryotic N-terminal methylation motif CF61_RS02600 PF12019 Type II transport protein GspH CF61_RS02605 PF07963 Prokaryotic N-terminal methylation motif CF61_RS02605 PF08334 Type II secretion system (T2SS), protein G CF61_RS02610 PF00482 Type II secretion system (T2SS), protein F CF61_RS02620 PF00263 Bacterial type II and III secretion system protein CF61_RS02620 PF03958 Bacterial type II/III secretion system short domain CF61_RS02625 PF11356 Type II secretion system protein C CF61_RS02630 PF01471 Putative peptidoglycan binding domain CF61_RS02630 PF13401 AAA domain CF61_RS02640 PF00338 Ribosomal protein S10p/S20e CF61_RS02645 PF00297 Ribosomal protein L3 CF61_RS02650 PF00573 Ribosomal protein L4/L1 family CF61_RS02655 PF00276 Ribosomal protein L23 CF61_RS02660 PF00181 Ribosomal Proteins L2, RNA binding domain CF61_RS02660 PF03947 Ribosomal Proteins L2, C-terminal domain CF61_RS02665 PF00203 Ribosomal protein S19 CF61_RS02670 PF00237 Ribosomal protein L22p/L17e CF61_RS02675 PF07650 KH domain CF61_RS02675 PF00189 Ribosomal protein S3, C-terminal domain CF61_RS02680 PF00252 Ribosomal protein L16p/L10e CF61_RS02685 PF00831 Ribosomal L29 protein CF61_RS02690 PF00366 Ribosomal protein S17 CF61_RS02695 PF00238 Ribosomal protein L14p/L23e CF61_RS02700 PF00467 KOW motif CF61_RS02700 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CF61_RS02705 PF00281 Ribosomal protein L5 CF61_RS02705 PF00673 ribosomal L5P family C-terminus CF61_RS02710 PF00253 Ribosomal protein S14p/S29e CF61_RS02715 PF00410 Ribosomal protein S8 CF61_RS02720 PF00347 Ribosomal protein L6 CF61_RS02725 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CF61_RS02730 PF03719 Ribosomal protein S5, C-terminal domain CF61_RS02730 PF00333 Ribosomal protein S5, N-terminal domain CF61_RS02735 PF00327 Ribosomal protein L30p/L7e CF61_RS02740 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CF61_RS02745 PF00344 SecY translocase CF61_RS02750 PF00444 Ribosomal protein L36 CF61_RS02755 PF00416 Ribosomal protein S13/S18 CF61_RS02760 PF00411 Ribosomal protein S11 CF61_RS02765 PF00163 Ribosomal protein S4/S9 N-terminal domain CF61_RS02765 PF01479 S4 domain CF61_RS02770 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CF61_RS02770 PF01000 RNA polymerase Rpb3/RpoA insert domain CF61_RS02770 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CF61_RS02775 PF01196 Ribosomal protein L17 CF61_RS02780 PF09350 Domain of unknown function (DUF1992) CF61_RS02785 PF13411 MerR HTH family regulatory protein CF61_RS02790 PF03889 Alternative ribosome-rescue factor A CF61_RS02795 PF01741 Large-conductance mechanosensitive channel, MscL CF61_RS02800 PF02080 TrkA-C domain CF61_RS02800 PF02254 TrkA-N domain CF61_RS02805 PF01189 16S rRNA methyltransferase RsmB/F CF61_RS02805 PF01029 NusB family CF61_RS02810 PF00551 Formyl transferase CF61_RS02810 PF02911 Formyl transferase, C-terminal domain CF61_RS02815 PF01327 Polypeptide deformylase CF61_RS02820 PF17782 DprA winged helix domain CF61_RS02820 PF02481 DNA recombination-mediator protein A CF61_RS02825 PF04361 Protein of unknown function (DUF494) CF61_RS02830 PF01396 Topoisomerase DNA binding C4 zinc finger CF61_RS02835 PF01300 Telomere recombination CF61_RS02840 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CF61_RS02840 PF01488 Shikimate / quinate 5-dehydrogenase CF61_RS02840 PF08501 Shikimate dehydrogenase substrate binding domain CF61_RS02845 PF07369 Protein of unknown function (DUF1488) CF61_RS02850 PF00132 Bacterial transferase hexapeptide (six repeats) CF61_RS02915 PF00005 ABC transporter CF61_RS02920 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS02925 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS02930 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF61_RS02945 PF00873 AcrB/AcrD/AcrF family CF61_RS02950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF61_RS02950 PF00529 HlyD membrane-fusion protein of T1SS CF61_RS02955 PF00440 Bacterial regulatory proteins, tetR family CF61_RS02955 PF08361 MAATS-type transcriptional repressor, C-terminal region CF61_RS02960 PF10831 Protein of unknown function (DUF2556) CF61_RS02965 PF01555 DNA methylase CF61_RS02970 PF02954 Bacterial regulatory protein, Fis family CF61_RS02975 PF01207 Dihydrouridine synthase (Dus) CF61_RS02985 PF00474 Sodium:solute symporter family CF61_RS02990 PF06196 Protein of unknown function (DUF997) CF61_RS02995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CF61_RS02995 PF02785 Biotin carboxylase C-terminal domain CF61_RS02995 PF00289 Biotin carboxylase, N-terminal domain CF61_RS03000 PF00364 Biotin-requiring enzyme CF61_RS03005 PF01794 Ferric reductase like transmembrane component CF61_RS03020 PF00107 Zinc-binding dehydrogenase CF61_RS03020 PF08240 Alcohol dehydrogenase GroES-like domain CF61_RS03025 PF17157 Gammaproteobacterial periplasmic sensor domain CF61_RS03025 PF00990 Diguanylate cyclase, GGDEF domain CF61_RS03025 PF00563 EAL domain CF61_RS03040 PF04085 rod shape-determining protein MreC CF61_RS03045 PF04093 rod shape-determining protein MreD CF61_RS03050 PF02545 Maf-like protein CF61_RS03055 PF00575 S1 RNA binding domain CF61_RS03055 PF10150 Ribonuclease E/G family CF61_RS03060 PF13116 Protein of unknown function CF61_RS03060 PF13502 AsmA-like C-terminal region CF61_RS03065 PF01523 Putative modulator of DNA gyrase CF61_RS03070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS03070 PF03466 LysR substrate binding domain CF61_RS03075 PF07869 Protein of unknown function (DUF1656) CF61_RS03080 PF13533 Biotin-lipoyl like CF61_RS03085 PF04632 Fusaric acid resistance protein family CF61_RS03090 PF01337 Barstar (barnase inhibitor) CF61_RS03095 PF07338 Protein of unknown function (DUF1471) CF61_RS03100 PF02863 Arginine repressor, C-terminal domain CF61_RS03100 PF01316 Arginine repressor, DNA binding domain CF61_RS03105 PF00056 lactate/malate dehydrogenase, NAD binding domain CF61_RS03105 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CF61_RS03110 PF13180 PDZ domain CF61_RS03115 PF00595 PDZ domain CF61_RS03115 PF13180 PDZ domain CF61_RS03120 PF06295 Protein of unknown function (DUF1043) CF61_RS03125 PF03969 AFG1-like ATPase CF61_RS03130 PF00572 Ribosomal protein L13 CF61_RS03135 PF00380 Ribosomal protein S9/S16 CF61_RS03140 PF00043 Glutathione S-transferase, C-terminal domain CF61_RS03140 PF02798 Glutathione S-transferase, N-terminal domain CF61_RS03145 PF04386 Stringent starvation protein B CF61_RS03150 PF03606 C4-dicarboxylate anaerobic carrier CF61_RS03155 PF00392 Bacterial regulatory proteins, gntR family CF61_RS03155 PF07729 FCD domain CF61_RS03160 PF00701 Dihydrodipicolinate synthetase family CF61_RS03165 PF07690 Major Facilitator Superfamily CF61_RS03170 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CF61_RS03175 PF00480 ROK family CF61_RS03180 PF04074 YhcH/YjgK/YiaL CF61_RS03190 PF17761 DUF1016 N-terminal domain CF61_RS03190 PF06250 YhcG PDDEXK nuclease domain CF61_RS03195 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CF61_RS03195 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF61_RS03200 PF04898 Glutamate synthase central domain CF61_RS03200 PF01645 Conserved region in glutamate synthase CF61_RS03200 PF01493 GXGXG motif CF61_RS03200 PF00310 Glutamine amidotransferases class-II CF61_RS03205 PF04055 Radical SAM superfamily CF61_RS03205 PF16199 Radical_SAM C-terminal domain CF61_RS03210 PF00072 Response regulator receiver domain CF61_RS03210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS03210 PF00989 PAS fold CF61_RS03210 PF01627 Hpt domain CF61_RS03210 PF00512 His Kinase A (phospho-acceptor) domain CF61_RS03210 PF18415 Histidine kinase receptor ArcB trans-membrane domain CF61_RS03220 PF00912 Transglycosylase CF61_RS03225 PF10707 PhoP regulatory network protein YrbL CF61_RS03230 PF00381 PTS HPr component phosphorylation site CF61_RS03235 PF03668 P-loop ATPase protein family CF61_RS03240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF61_RS03245 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CF61_RS03250 PF04552 Sigma-54, DNA binding domain CF61_RS03250 PF00309 Sigma-54 factor, Activator interacting domain (AID) CF61_RS03250 PF04963 Sigma-54 factor, core binding domain CF61_RS03255 PF12399 Branched-chain amino acid ATP-binding cassette transporter CF61_RS03255 PF00005 ABC transporter CF61_RS03260 PF03968 OstA-like protein CF61_RS03265 PF06835 Lipopolysaccharide-assembly, LptC-related CF61_RS03275 PF01380 SIS domain CF61_RS03275 PF00571 CBS domain CF61_RS03280 PF01699 Sodium/calcium exchanger protein CF61_RS03285 PF00005 ABC transporter CF61_RS03290 PF02405 Permease MlaE CF61_RS03295 PF02470 MlaD protein CF61_RS03300 PF05494 MlaC protein CF61_RS03305 PF13466 STAS domain CF61_RS03310 PF01722 BolA-like protein CF61_RS03315 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CF61_RS03320 PF13693 Winged helix-turn-helix DNA-binding CF61_RS03325 PF00348 Polyprenyl synthetase CF61_RS03330 PF00829 Ribosomal prokaryotic L21 protein CF61_RS03335 PF01016 Ribosomal L27 protein CF61_RS03340 PF00892 EamA-like transporter family CF61_RS03345 PF01018 GTP1/OBG CF61_RS03345 PF01926 50S ribosome-binding GTPase CF61_RS03350 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CF61_RS03355 PF01272 Transcription elongation factor, GreA/GreB, C-term CF61_RS03355 PF03449 Transcription elongation factor, N-terminal CF61_RS03360 PF01985 CRS1 / YhbY (CRM) domain CF61_RS03365 PF01728 FtsJ-like methyltransferase CF61_RS03370 PF17862 AAA+ lid domain CF61_RS03370 PF06480 FtsH Extracellular CF61_RS03370 PF01434 Peptidase family M41 CF61_RS03370 PF00004 ATPase family associated with various cellular activities (AAA) CF61_RS03375 PF00809 Pterin binding enzyme CF61_RS03380 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CF61_RS03380 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CF61_RS03380 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CF61_RS03380 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CF61_RS03385 PF03840 Preprotein translocase SecG subunit CF61_RS03395 PF00884 Sulfatase CF61_RS03400 PF00764 Arginosuccinate synthase CF61_RS03410 PF02576 RimP N-terminal domain CF61_RS03410 PF17384 RimP C-terminal SH3 domain CF61_RS03415 PF13184 NusA-like KH domain CF61_RS03415 PF08529 NusA N-terminal domain CF61_RS03415 PF00575 S1 RNA binding domain CF61_RS03420 PF08364 Bacterial translation initiation factor IF-2 associated region CF61_RS03420 PF11987 Translation-initiation factor 2 CF61_RS03420 PF00009 Elongation factor Tu GTP binding domain CF61_RS03420 PF04760 Translation initiation factor IF-2, N-terminal region CF61_RS03425 PF02033 Ribosome-binding factor A CF61_RS03430 PF16198 tRNA pseudouridylate synthase B C-terminal domain CF61_RS03430 PF01509 TruB family pseudouridylate synthase (N terminal domain) CF61_RS03430 PF09157 Pseudouridine synthase II TruB, C-terminal CF61_RS03435 PF00312 Ribosomal protein S15 CF61_RS03440 PF00013 KH domain CF61_RS03440 PF03725 3' exoribonuclease family, domain 2 CF61_RS03440 PF01138 3' exoribonuclease family, domain 1 CF61_RS03440 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CF61_RS03440 PF00575 S1 RNA binding domain CF61_RS03445 PF13181 Tetratricopeptide repeat CF61_RS03445 PF07719 Tetratricopeptide repeat CF61_RS03450 PF00271 Helicase conserved C-terminal domain CF61_RS03450 PF12343 Cold shock protein DEAD box A CF61_RS03450 PF00270 DEAD/DEAH box helicase CF61_RS03450 PF03880 DbpA RNA binding domain CF61_RS03460 PF03222 Tryptophan/tyrosine permease family CF61_RS03465 PF00296 Luciferase-like monooxygenase CF61_RS03470 PF01136 Peptidase family U32 CF61_RS03475 PF01136 Peptidase family U32 CF61_RS03480 PF02036 SCP-2 sterol transfer family CF61_RS03485 PF13508 Acetyltransferase (GNAT) domain CF61_RS03490 PF01541 GIY-YIG catalytic domain CF61_RS03500 PF01965 DJ-1/PfpI family CF61_RS03505 PF13460 NAD(P)H-binding CF61_RS03510 PF03773 Predicted permease CF61_RS03515 PF04972 BON domain CF61_RS03520 PF13580 SIS domain CF61_RS03525 PF02021 Uncharacterised protein family UPF0102 CF61_RS03530 PF04348 LppC putative lipoprotein CF61_RS03535 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CF61_RS03540 PF00419 Fimbrial protein CF61_RS03545 PF13953 PapC C-terminal domain CF61_RS03545 PF13954 PapC N-terminal domain CF61_RS03545 PF00577 Outer membrane usher protein CF61_RS03550 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF61_RS03550 PF02753 Pili assembly chaperone PapD, C-terminal domain CF61_RS03555 PF00419 Fimbrial protein CF61_RS03560 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CF61_RS03565 PF03613 PTS system mannose/fructose/sorbose family IID component CF61_RS03570 PF03609 PTS system sorbose-specific iic component CF61_RS03575 PF03830 PTS system sorbose subfamily IIB component CF61_RS03580 PF01116 Fructose-bisphosphate aldolase class-II CF61_RS03585 PF01380 SIS domain CF61_RS03590 PF01979 Amidohydrolase family CF61_RS03595 PF03610 PTS system fructose IIA component CF61_RS03600 PF03613 PTS system mannose/fructose/sorbose family IID component CF61_RS03605 PF03609 PTS system sorbose-specific iic component CF61_RS03610 PF03830 PTS system sorbose subfamily IIB component CF61_RS03615 PF08013 Tagatose 6 phosphate kinase CF61_RS03620 PF00455 DeoR C terminal sensor domain CF61_RS03620 PF08220 DeoR-like helix-turn-helix domain CF61_RS03625 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system CF61_RS03630 PF15937 prlF antitoxin for toxin YhaV_toxin CF61_RS03635 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CF61_RS03635 PF08666 SAF domain CF61_RS03640 PF07690 Major Facilitator Superfamily CF61_RS03645 PF03328 HpcH/HpaI aldolase/citrate lyase family CF61_RS03650 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CF61_RS03650 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CF61_RS03655 PF02595 Glycerate kinase family CF61_RS03675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS03675 PF03466 LysR substrate binding domain CF61_RS03680 PF00291 Pyridoxal-phosphate dependent enzyme CF61_RS03685 PF03222 Tryptophan/tyrosine permease family CF61_RS03690 PF00871 Acetokinase family CF61_RS03695 PF01228 Glycine radical CF61_RS03695 PF02901 Pyruvate formate lyase-like CF61_RS03700 PF01042 Endoribonuclease L-PSP CF61_RS03705 PF03315 Serine dehydratase beta chain CF61_RS03705 PF03313 Serine dehydratase alpha chain CF61_RS03715 PF03313 Serine dehydratase alpha chain CF61_RS03725 PF17954 Quercetinase C-terminal cupin domain CF61_RS03725 PF02678 Pirin CF61_RS03730 PF03466 LysR substrate binding domain CF61_RS03730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS03735 PF05656 Protein of unknown function (DUF805) CF61_RS03740 PF05656 Protein of unknown function (DUF805) CF61_RS03745 PF13409 Glutathione S-transferase, N-terminal domain CF61_RS03750 PF07681 DoxX CF61_RS03755 PF13997 YqjK-like protein CF61_RS03760 PF07332 Putative Actinobacterial Holin-X, holin superfamily III CF61_RS03765 PF05957 Bacterial protein of unknown function (DUF883) CF61_RS03770 PF06476 Protein of unknown function (DUF1090) CF61_RS03775 PF13721 SecD export protein N-terminal TM region CF61_RS03780 PF09335 SNARE associated Golgi protein CF61_RS03785 PF00392 Bacterial regulatory proteins, gntR family CF61_RS03785 PF07729 FCD domain CF61_RS03795 PF04449 CS1 type fimbrial major subunit CF61_RS03800 PF17271 TcfC Usher-like barrel domain CF61_RS03800 PF16967 E-set like domain CF61_RS03800 PF15976 CS1-pili formation C-terminal CF61_RS03810 PF07690 Major Facilitator Superfamily CF61_RS03815 PF02614 Glucuronate isomerase CF61_RS03820 PF08666 SAF domain CF61_RS03820 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CF61_RS03825 PF10688 Bacterial inner membrane protein CF61_RS03830 PF00375 Sodium:dicarboxylate symporter family CF61_RS03835 PF03741 Integral membrane protein TerC family CF61_RS03840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CF61_RS03845 PF02698 DUF218 domain CF61_RS03850 PF01863 Protein of unknown function DUF45 CF61_RS03855 PF05175 Methyltransferase small domain CF61_RS03865 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system CF61_RS03870 PF01381 Helix-turn-helix CF61_RS03875 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF61_RS03875 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CF61_RS03880 PF01204 Trehalase CF61_RS03890 PF13520 Amino acid permease CF61_RS03895 PF04074 YhcH/YjgK/YiaL CF61_RS03900 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CF61_RS03900 PF00703 Glycosyl hydrolases family 2 CF61_RS03900 PF16353 Domain of unknown function(DUF4981) CF61_RS03900 PF02929 Beta galactosidase small chain CF61_RS03900 PF02837 Glycosyl hydrolases family 2, sugar binding domain CF61_RS03905 PF00356 Bacterial regulatory proteins, lacI family CF61_RS03910 PF01588 Putative tRNA binding domain CF61_RS03915 PF00202 Aminotransferase class-III CF61_RS03920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CF61_RS03920 PF08447 PAS fold CF61_RS03925 PF03551 Transcriptional regulator PadR-like family CF61_RS03930 PF08021 Siderophore-interacting FAD-binding domain CF61_RS03930 PF04954 Siderophore-interacting protein CF61_RS03940 PF03167 Uracil DNA glycosylase superfamily CF61_RS03945 PF04539 Sigma-70 region 3 CF61_RS03945 PF04542 Sigma-70 region 2 CF61_RS03945 PF00140 Sigma-70 factor, region 1.2 CF61_RS03945 PF04545 Sigma-70, region 4 CF61_RS03945 PF03979 Sigma-70 factor, region 1.1 CF61_RS03945 PF04546 Sigma-70, non-essential region CF61_RS03950 PF10410 DnaB-helicase binding domain of primase CF61_RS03950 PF08275 DNA primase catalytic core, N-terminal domain CF61_RS03950 PF01807 CHC2 zinc finger CF61_RS03950 PF08278 DNA primase DnaG DnaB-binding CF61_RS03955 PF01165 Ribosomal protein S21 CF61_RS03960 PF00814 Glycoprotease family CF61_RS03965 PF00939 Sodium:sulfate symporter transmembrane region CF61_RS03970 PF05683 Fumarase C-terminus CF61_RS03975 PF05681 Fumarate hydratase (Fumerase) CF61_RS03980 PF03466 LysR substrate binding domain CF61_RS03980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS03985 PF02660 Glycerol-3-phosphate acyltransferase CF61_RS03990 PF02152 Dihydroneopterin aldolase CF61_RS03995 PF02673 Bacitracin resistance protein BacA CF61_RS04000 PF01743 Poly A polymerase head domain CF61_RS04000 PF01966 HD domain CF61_RS04000 PF12627 Probable RNA and SrmB- binding site of polymerase A CF61_RS04005 PF08239 Bacterial SH3 domain CF61_RS04015 PF01928 CYTH domain CF61_RS04020 PF08335 GlnD PII-uridylyltransferase CF61_RS04020 PF03710 Glutamate-ammonia ligase adenylyltransferase CF61_RS04025 PF01467 Cytidylyltransferase-like CF61_RS04025 PF00294 pfkB family carbohydrate kinase CF61_RS04040 PF15975 Flotillin CF61_RS04040 PF01145 SPFH domain / Band 7 family CF61_RS04045 PF07290 Protein of unknown function (DUF1449) CF61_RS04050 PF08971 Glycogen synthesis protein CF61_RS04060 PF02753 Pili assembly chaperone PapD, C-terminal domain CF61_RS04060 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF61_RS04065 PF13954 PapC N-terminal domain CF61_RS04065 PF13953 PapC C-terminal domain CF61_RS04065 PF00577 Outer membrane usher protein CF61_RS04070 PF00419 Fimbrial protein CF61_RS04075 PF04380 Membrane fusogenic activity CF61_RS04080 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CF61_RS04090 PF02535 ZIP Zinc transporter CF61_RS04095 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CF61_RS04100 PF03738 Glutathionylspermidine synthase preATP-grasp CF61_RS04105 PF06693 Protein of unknown function (DUF1190) CF61_RS04115 PF02321 Outer membrane efflux protein CF61_RS04120 PF00293 NUDIX domain CF61_RS04125 PF06853 Protein of unknown function (DUF1249) CF61_RS04130 PF00149 Calcineurin-like phosphoesterase CF61_RS04135 PF05728 Uncharacterised protein family (UPF0227) CF61_RS04140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS04140 PF00986 DNA gyrase B subunit, carboxyl terminus CF61_RS04140 PF00204 DNA gyrase B CF61_RS04140 PF01751 Toprim domain CF61_RS04145 PF03992 Antibiotic biosynthesis monooxygenase CF61_RS04150 PF02525 Flavodoxin-like fold CF61_RS04155 PF10840 Protein of unknown function (DUF2645) CF61_RS04160 PF08521 Two-component sensor kinase N-terminal CF61_RS04160 PF00512 His Kinase A (phospho-acceptor) domain CF61_RS04160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS04165 PF00486 Transcriptional regulatory protein, C terminal CF61_RS04165 PF00072 Response regulator receiver domain CF61_RS04170 PF04076 Bacterial OB fold (BOF) protein CF61_RS04175 PF06445 GyrI-like small molecule binding domain CF61_RS04180 PF15723 Motility quorum-sensing regulator, toxin of MqsA CF61_RS04185 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA CF61_RS04190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF61_RS04195 PF03989 DNA gyrase C-terminal domain, beta-propeller CF61_RS04195 PF00521 DNA gyrase/topoisomerase IV, subunit A CF61_RS04200 PF01553 Acyltransferase CF61_RS04205 PF07732 Multicopper oxidase CF61_RS04205 PF07731 Multicopper oxidase CF61_RS04205 PF00394 Multicopper oxidase CF61_RS04210 PF08497 Radical SAM N-terminal CF61_RS04210 PF04055 Radical SAM superfamily CF61_RS04210 PF11842 Domain of unknown function (DUF3362) CF61_RS04215 PF04728 Lipoprotein leucine-zipper CF61_RS04220 PF12883 Protein of unknown function (DUF3828) CF61_RS04225 PF00248 Aldo/keto reductase family CF61_RS04230 PF00465 Iron-containing alcohol dehydrogenase CF61_RS04240 PF12833 Helix-turn-helix domain CF61_RS04240 PF06719 AraC-type transcriptional regulator N-terminus CF61_RS04245 PF09335 SNARE associated Golgi protein CF61_RS04250 PF01053 Cys/Met metabolism PLP-dependent enzyme CF61_RS04260 PF01618 MotA/TolQ/ExbB proton channel family CF61_RS04265 PF02472 Biopolymer transport protein ExbD/TolR CF61_RS04275 PF03350 Uncharacterized protein family, UPF0114 CF61_RS04280 PF00248 Aldo/keto reductase family CF61_RS04290 PF11115 Protein of unknown function (DUF2623) CF61_RS04310 PF00248 Aldo/keto reductase family CF61_RS04320 PF01738 Dienelactone hydrolase family CF61_RS04325 PF11115 Protein of unknown function (DUF2623) CF61_RS04330 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CF61_RS04330 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CF61_RS04335 PF13247 4Fe-4S dicluster domain CF61_RS04340 PF03916 Polysulphide reductase, NrfD CF61_RS04345 PF00374 Nickel-dependent hydrogenase CF61_RS04350 PF01750 Hydrogenase maturation protease CF61_RS04355 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE CF61_RS04360 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CF61_RS04365 PF01455 HupF/HypC family CF61_RS04370 PF02798 Glutathione S-transferase, N-terminal domain CF61_RS04375 PF05257 CHAP domain CF61_RS04375 PF03738 Glutathionylspermidine synthase preATP-grasp CF61_RS04380 PF01384 Phosphate transporter family CF61_RS04400 PF01943 Polysaccharide biosynthesis protein CF61_RS04410 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CF61_RS04415 PF03739 Lipopolysaccharide export system permease LptF/LptG CF61_RS04425 PF00155 Aminotransferase class I and II CF61_RS04430 PF00550 Phosphopantetheine attachment site CF61_RS04440 PF14535 AMP-binding enzyme C-terminal domain CF61_RS04440 PF00501 AMP-binding enzyme CF61_RS04450 PF00392 Bacterial regulatory proteins, gntR family CF61_RS04450 PF07729 FCD domain CF61_RS04455 PF01565 FAD binding domain CF61_RS04455 PF02913 FAD linked oxidases, C-terminal domain CF61_RS04460 PF01565 FAD binding domain CF61_RS04465 PF02754 Cysteine-rich domain CF61_RS04465 PF13183 4Fe-4S dicluster domain CF61_RS04470 PF03928 Haem-degrading CF61_RS04475 PF01274 Malate synthase CF61_RS04480 PF02652 L-lactate permease CF61_RS04500 PF16549 Type II secretion system (T2SS) pilotin, S protein CF61_RS04505 PF11356 Type II secretion system protein C CF61_RS04510 PF03958 Bacterial type II/III secretion system short domain CF61_RS04510 PF00263 Bacterial type II and III secretion system protein CF61_RS04515 PF00437 Type II/IV secretion system protein CF61_RS04520 PF04612 Type II secretion system (T2SS), protein M CF61_RS04530 PF04474 Protein of unknown function (DUF554) CF61_RS04535 PF01276 Orn/Lys/Arg decarboxylase, major domain CF61_RS04535 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CF61_RS04535 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CF61_RS04540 PF03825 Nucleoside H+ symporter CF61_RS04545 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CF61_RS04545 PF01464 Transglycosylase SLT domain CF61_RS04550 PF04362 Bacterial Fe(2+) trafficking CF61_RS04555 PF00730 HhH-GPD superfamily base excision DNA repair protein CF61_RS04555 PF14815 NUDIX domain CF61_RS04555 PF10576 Iron-sulfur binding domain of endonuclease III CF61_RS04555 PF00633 Helix-hairpin-helix motif CF61_RS04560 PF02390 Putative methyltransferase CF61_RS04565 PF04320 Protein with unknown function (DUF469) CF61_RS04575 PF11101 Protein of unknown function (DUF2884) CF61_RS04580 PF17763 Glutaminase/Asparaginase C-terminal domain CF61_RS04580 PF00710 Asparaginase, N-terminal CF61_RS04585 PF06717 Protein of unknown function (DUF1202) CF61_RS04590 PF04055 Radical SAM superfamily CF61_RS04590 PF06969 HemN C-terminal domain CF61_RS04595 PF01725 Ham1 family CF61_RS04600 PF02594 Uncharacterised ACR, YggU family COG1872 CF61_RS04605 PF02325 YGGT family CF61_RS04610 PF01168 Alanine racemase, N-terminal domain CF61_RS04615 PF00437 Type II/IV secretion system protein CF61_RS04620 PF03652 Holliday junction resolvase CF61_RS04625 PF02622 Uncharacterized ACR, COG1678 CF61_RS04630 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CF61_RS04630 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CF61_RS04635 PF04452 RNA methyltransferase CF61_RS04640 PF04231 Endonuclease I CF61_RS04645 PF17283 SprT-like zinc ribbon domain CF61_RS04645 PF10263 SprT-like family CF61_RS04650 PF00083 Sugar (and other) transporter CF61_RS04655 PF00438 S-adenosylmethionine synthetase, N-terminal domain CF61_RS04655 PF02773 S-adenosylmethionine synthetase, C-terminal domain CF61_RS04655 PF02772 S-adenosylmethionine synthetase, central domain CF61_RS04665 PF17430 Uncharacterized YqgC-like CF61_RS04670 PF11036 Virulence promoting factor CF61_RS04675 PF17810 Arginine decarboxylase helical bundle domain CF61_RS04675 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CF61_RS04675 PF17944 Arginine decarboxylase C-terminal helical extension CF61_RS04680 PF00491 Arginase family CF61_RS04685 PF01435 Peptidase family M48 CF61_RS04690 PF02779 Transketolase, pyrimidine binding domain CF61_RS04690 PF02780 Transketolase, C-terminal domain CF61_RS04690 PF00456 Transketolase, thiamine diphosphate binding domain CF61_RS04695 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF61_RS04700 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF61_RS04700 PF02378 Phosphotransferase system, EIIC CF61_RS04705 PF00107 Zinc-binding dehydrogenase CF61_RS04705 PF08240 Alcohol dehydrogenase GroES-like domain CF61_RS04710 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CF61_RS04715 PF05068 Mannitol repressor CF61_RS04725 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CF61_RS04725 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CF61_RS04730 PF00162 Phosphoglycerate kinase CF61_RS04735 PF01116 Fructose-bisphosphate aldolase class-II CF61_RS04740 PF05552 Conserved TM helix CF61_RS04740 PF00924 Mechanosensitive ion channel CF61_RS04745 PF01810 LysE type translocator CF61_RS04750 PF04402 Protein of unknown function (DUF541) CF61_RS04755 PF03466 LysR substrate binding domain CF61_RS04755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS04760 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CF61_RS04760 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CF61_RS04765 PF00378 Enoyl-CoA hydratase/isomerase CF61_RS04775 PF02310 B12 binding domain CF61_RS04775 PF01642 Methylmalonyl-CoA mutase CF61_RS04780 PF03466 LysR substrate binding domain CF61_RS04780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS04785 PF03466 LysR substrate binding domain CF61_RS04790 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CF61_RS04795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CF61_RS04795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CF61_RS04795 PF01842 ACT domain CF61_RS04800 PF01812 5-formyltetrahydrofolate cyclo-ligase family CF61_RS04805 PF05164 Cell division protein ZapA CF61_RS04810 PF03695 Uncharacterised protein family (UPF0149) CF61_RS04815 PF00557 Metallopeptidase family M24 CF61_RS04815 PF05195 Aminopeptidase P, N-terminal domain CF61_RS04820 PF01494 FAD binding domain CF61_RS04825 PF01494 FAD binding domain CF61_RS04830 PF01571 Aminomethyltransferase folate-binding domain CF61_RS04830 PF08669 Glycine cleavage T-protein C-terminal barrel domain CF61_RS04835 PF01597 Glycine cleavage H-protein CF61_RS04840 PF02347 Glycine cleavage system P-protein CF61_RS04845 PF00232 Glycosyl hydrolase family 1 CF61_RS04850 PF04266 ASCH domain CF61_RS04855 PF03006 Haemolysin-III related CF61_RS04860 PF01571 Aminomethyltransferase folate-binding domain CF61_RS04865 PF03937 Flavinator of succinate dehydrogenase CF61_RS04870 PF07254 Membrane-bound toxin component of toxin-antitoxin system CF61_RS04875 PF00258 Flavodoxin CF61_RS04880 PF00589 Phage integrase family CF61_RS04880 PF02899 Phage integrase, N-terminal SAM-like domain CF61_RS04885 PF13098 Thioredoxin-like domain CF61_RS04885 PF10411 Disulfide bond isomerase protein N-terminus CF61_RS04890 PF17768 RecJ OB domain CF61_RS04890 PF02272 DHHA1 domain CF61_RS04890 PF01368 DHH family CF61_RS04895 PF03462 PCRF domain CF61_RS04895 PF00472 RF-1 domain CF61_RS04900 PF00152 tRNA synthetases class II (D, K and N) CF61_RS04900 PF01336 OB-fold nucleic acid binding domain CF61_RS04905 PF00293 NUDIX domain CF61_RS04915 PF00860 Permease family CF61_RS04925 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF61_RS04925 PF13247 4Fe-4S dicluster domain CF61_RS04925 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CF61_RS04930 PF13247 4Fe-4S dicluster domain CF61_RS04935 PF00860 Permease family CF61_RS04940 PF01979 Amidohydrolase family CF61_RS04945 PF01527 Transposase CF61_RS04950 PF13276 HTH-like domain CF61_RS04950 PF00665 Integrase core domain CF61_RS04955 PF00860 Permease family CF61_RS04960 PF01799 [2Fe-2S] binding domain CF61_RS04960 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CF61_RS04960 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CF61_RS04965 PF00941 FAD binding domain in molybdopterin dehydrogenase CF61_RS04970 PF01979 Amidohydrolase family CF61_RS04975 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CF61_RS04975 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF61_RS04980 PF12804 MobA-like NTP transferase domain CF61_RS04995 PF00696 Amino acid kinase family CF61_RS05000 PF01979 Amidohydrolase family CF61_RS05005 PF07687 Peptidase dimerisation domain CF61_RS05005 PF01546 Peptidase family M20/M25/M40 CF61_RS05010 PF00291 Pyridoxal-phosphate dependent enzyme CF61_RS05015 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CF61_RS05015 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CF61_RS05020 PF00158 Sigma-54 interaction domain CF61_RS05020 PF02954 Bacterial regulatory protein, Fis family CF61_RS05020 PF13188 PAS domain CF61_RS05025 PF01799 [2Fe-2S] binding domain CF61_RS05025 PF00111 2Fe-2S iron-sulfur cluster binding domain CF61_RS05030 PF00941 FAD binding domain in molybdopterin dehydrogenase CF61_RS05030 PF03450 CO dehydrogenase flavoprotein C-terminal domain CF61_RS05035 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CF61_RS05035 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CF61_RS05040 PF01551 Peptidase family M23 CF61_RS05040 PF01476 LysM domain CF61_RS05065 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CF61_RS05070 PF00813 FliP family CF61_RS05075 PF01313 Bacterial export proteins, family 3 CF61_RS05080 PF01311 Bacterial export proteins, family 1 CF61_RS05085 PF01312 FlhB HrpN YscU SpaS Family CF61_RS05090 PF01312 FlhB HrpN YscU SpaS Family CF61_RS05095 PF00486 Transcriptional regulatory protein, C terminal CF61_RS05100 PF00196 Bacterial regulatory proteins, luxR family CF61_RS05105 PF03222 Tryptophan/tyrosine permease family CF61_RS05110 PF00108 Thiolase, N-terminal domain CF61_RS05110 PF02803 Thiolase, C-terminal domain CF61_RS05115 PF04962 KduI/IolB family CF61_RS05125 PF00083 Sugar (and other) transporter CF61_RS05130 PF01177 Asp/Glu/Hydantoin racemase CF61_RS05135 PF03466 LysR substrate binding domain CF61_RS05135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS05140 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CF61_RS05140 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CF61_RS05145 PF00356 Bacterial regulatory proteins, lacI family CF61_RS05150 PF01553 Acyltransferase CF61_RS05150 PF00501 AMP-binding enzyme CF61_RS05155 PF07690 Major Facilitator Superfamily CF61_RS05160 PF00248 Aldo/keto reductase family CF61_RS05165 PF06004 Bacterial protein of unknown function (DUF903) CF61_RS05170 PF03741 Integral membrane protein TerC family CF61_RS05175 PF02976 DNA mismatch repair enzyme MutH CF61_RS05190 PF00293 NUDIX domain CF61_RS05195 PF01590 GAF domain CF61_RS05195 PF02896 PEP-utilising enzyme, TIM barrel domain CF61_RS05195 PF05524 PEP-utilising enzyme, N-terminal CF61_RS05195 PF00391 PEP-utilising enzyme, mobile domain CF61_RS05200 PF01790 Prolipoprotein diacylglyceryl transferase CF61_RS05205 PF00303 Thymidylate synthase CF61_RS05210 PF07963 Prokaryotic N-terminal methylation motif CF61_RS05215 PF07963 Prokaryotic N-terminal methylation motif CF61_RS05220 PF10713 Protein of unknown function (DUF2509) CF61_RS05225 PF12528 Type II secretion prepilin peptidase dependent protein C CF61_RS05225 PF07963 Prokaryotic N-terminal methylation motif CF61_RS05230 PF17946 RecC C-terminal domain CF61_RS05235 PF16187 Middle or third domain of peptidase_M16 CF61_RS05235 PF05193 Peptidase M16 inactive domain CF61_RS05235 PF00675 Insulinase (Peptidase family M16) CF61_RS05240 PF12705 PD-(D/E)XK nuclease superfamily CF61_RS05240 PF00580 UvrD/REP helicase N-terminal domain CF61_RS05240 PF13361 UvrD-like helicase C-terminal domain CF61_RS05245 PF13538 UvrD-like helicase C-terminal domain CF61_RS05250 PF00583 Acetyltransferase (GNAT) family CF61_RS05250 PF00696 Amino acid kinase family CF61_RS05255 PF01520 N-acetylmuramoyl-L-alanine amidase CF61_RS05255 PF11741 AMIN domain CF61_RS05275 PF06725 3D domain CF61_RS05275 PF03562 MltA specific insert domain CF61_RS05280 PF00899 ThiF family CF61_RS05285 PF02657 Fe-S metabolism associated domain CF61_RS05290 PF00266 Aminotransferase class-V CF61_RS05295 PF06004 Bacterial protein of unknown function (DUF903) CF61_RS05300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS05300 PF03466 LysR substrate binding domain CF61_RS05305 PF04241 Protein of unknown function (DUF423) CF61_RS05310 PF18125 RlmM ferredoxin-like domain CF61_RS05310 PF01728 FtsJ-like methyltransferase CF61_RS05315 PF00455 DeoR C terminal sensor domain CF61_RS05315 PF08220 DeoR-like helix-turn-helix domain CF61_RS05320 PF05025 RbsD / FucU transport protein family CF61_RS05325 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CF61_RS05325 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CF61_RS05330 PF02952 L-fucose isomerase, C-terminal domain CF61_RS05330 PF07882 L-fucose isomerase, second N-terminal domain CF61_RS05330 PF07881 L-fucose isomerase, first N-terminal domain CF61_RS05335 PF07690 Major Facilitator Superfamily CF61_RS05340 PF00596 Class II Aldolase and Adducin N-terminal domain CF61_RS05345 PF00465 Iron-containing alcohol dehydrogenase CF61_RS05350 PF01367 5'-3' exonuclease, C-terminal SAM fold CF61_RS05350 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CF61_RS05355 PF03315 Serine dehydratase beta chain CF61_RS05355 PF03313 Serine dehydratase alpha chain CF61_RS05365 PF03641 Possible lysine decarboxylase CF61_RS05365 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CF61_RS05365 PF11892 Domain of unknown function (DUF3412) CF61_RS05370 PF14489 QueF-like protein CF61_RS05370 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CF61_RS05375 PF07348 Syd protein (SUKH-2) CF61_RS05385 PF04287 tRNA pseudouridine synthase C CF61_RS05390 PF00849 RNA pseudouridylate synthase CF61_RS05395 PF00258 Flavodoxin CF61_RS05400 PF07690 Major Facilitator Superfamily CF61_RS05405 PF13378 Enolase C-terminal domain-like CF61_RS05410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS05410 PF01627 Hpt domain CF61_RS05410 PF00672 HAMP domain CF61_RS05410 PF00512 His Kinase A (phospho-acceptor) domain CF61_RS05410 PF00072 Response regulator receiver domain CF61_RS05410 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CF61_RS05415 PF05958 tRNA (Uracil-5-)-methyltransferase CF61_RS05415 PF01938 TRAM domain CF61_RS05420 PF13291 ACT domain CF61_RS05420 PF04607 Region found in RelA / SpoT proteins CF61_RS05420 PF02824 TGS domain CF61_RS05425 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CF61_RS05430 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CF61_RS05435 PF03819 MazG nucleotide pyrophosphohydrolase domain CF61_RS05440 PF06418 CTP synthase N-terminus CF61_RS05440 PF00117 Glutamine amidotransferase class-I CF61_RS05445 PF00113 Enolase, C-terminal TIM barrel domain CF61_RS05445 PF03952 Enolase, N-terminal domain CF61_RS05450 PF04536 TPM domain CF61_RS05460 PF04055 Radical SAM superfamily CF61_RS05465 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CF61_RS05465 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CF61_RS05470 PF07690 Major Facilitator Superfamily CF61_RS05480 PF02913 FAD linked oxidases, C-terminal domain CF61_RS05480 PF01565 FAD binding domain CF61_RS05485 PF00083 Sugar (and other) transporter CF61_RS05490 PF01012 Electron transfer flavoprotein domain CF61_RS05495 PF00766 Electron transfer flavoprotein FAD-binding domain CF61_RS05495 PF01012 Electron transfer flavoprotein domain CF61_RS05500 PF04309 Glycerol-3-phosphate responsive antiterminator CF61_RS05510 PF01266 FAD dependent oxidoreductase CF61_RS05515 PF01242 6-pyruvoyl tetrahydropterin synthase CF61_RS05520 PF00175 Oxidoreductase NAD-binding domain CF61_RS05520 PF00258 Flavodoxin CF61_RS05520 PF00667 FAD binding domain CF61_RS05525 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CF61_RS05525 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CF61_RS05530 PF01507 Phosphoadenosine phosphosulfate reductase family CF61_RS05535 PF00271 Helicase conserved C-terminal domain CF61_RS05535 PF00270 DEAD/DEAH box helicase CF61_RS05535 PF18019 HD domain CF61_RS05540 PF01527 Transposase CF61_RS05545 PF00665 Integrase core domain CF61_RS05545 PF13333 Integrase core domain CF61_RS05545 PF13276 HTH-like domain CF61_RS05550 PF18019 HD domain CF61_RS05550 PF00270 DEAD/DEAH box helicase CF61_RS05550 PF00271 Helicase conserved C-terminal domain CF61_RS05555 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) CF61_RS05560 PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) CF61_RS05565 PF09344 CT1975-like protein CF61_RS05570 PF09704 CRISPR-associated protein (Cas_Cas5) CF61_RS05575 PF08798 CRISPR associated protein CF61_RS05580 PF01867 CRISPR associated protein Cas1 CF61_RS05585 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) CF61_RS05590 PF04389 Peptidase family M28 CF61_RS05595 PF01507 Phosphoadenosine phosphosulfate reductase family CF61_RS05600 PF00009 Elongation factor Tu GTP binding domain CF61_RS05610 PF12084 Protein of unknown function (DUF3561) CF61_RS05615 PF04977 Septum formation initiator CF61_RS05620 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CF61_RS05625 PF02542 YgbB family CF61_RS05630 PF01142 tRNA pseudouridine synthase D (TruD) CF61_RS05635 PF01975 Survival protein SurE CF61_RS05645 PF01551 Peptidase family M23 CF61_RS05645 PF01476 LysM domain CF61_RS05650 PF00140 Sigma-70 factor, region 1.2 CF61_RS05650 PF04542 Sigma-70 region 2 CF61_RS05650 PF04545 Sigma-70, region 4 CF61_RS05650 PF04539 Sigma-70 region 3 CF61_RS05655 PF02447 GntP family permease CF61_RS05660 PF01261 Xylose isomerase-like TIM barrel CF61_RS05665 PF00596 Class II Aldolase and Adducin N-terminal domain CF61_RS05670 PF17042 Nucleotide-binding C-terminal domain CF61_RS05670 PF07005 Sugar-binding N-terminal domain CF61_RS05675 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CF61_RS05675 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CF61_RS05680 PF00455 DeoR C terminal sensor domain CF61_RS05680 PF08220 DeoR-like helix-turn-helix domain CF61_RS05685 PF00149 Calcineurin-like phosphoesterase CF61_RS05690 PF00488 MutS domain V CF61_RS05690 PF05190 MutS family domain IV CF61_RS05690 PF05192 MutS domain III CF61_RS05690 PF01624 MutS domain I CF61_RS05690 PF05188 MutS domain II CF61_RS05700 PF11756 Nitrous oxide-stimulated promoter CF61_RS05705 PF00158 Sigma-54 interaction domain CF61_RS05705 PF01590 GAF domain CF61_RS05710 PF02769 AIR synthase related protein, C-terminal domain CF61_RS05710 PF00586 AIR synthase related protein, N-terminal domain CF61_RS05715 PF01924 Hydrogenase formation hypA family CF61_RS05720 PF01455 HupF/HypC family CF61_RS05725 PF02492 CobW/HypB/UreG, nucleotide-binding domain CF61_RS05730 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CF61_RS05735 PF11046 Transcriptional repressor of hyc and hyp operons CF61_RS05745 PF13247 4Fe-4S dicluster domain CF61_RS05750 PF00361 Proton-conducting membrane transporter CF61_RS05755 PF00146 NADH dehydrogenase CF61_RS05760 PF00374 Nickel-dependent hydrogenase CF61_RS05760 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CF61_RS05760 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CF61_RS05765 PF12838 4Fe-4S dicluster domain CF61_RS05770 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CF61_RS05775 PF07450 Formate hydrogenlyase maturation protein HycH CF61_RS05780 PF01750 Hydrogenase maturation protease CF61_RS05785 PF00232 Glycosyl hydrolase family 1 CF61_RS05790 PF00367 phosphotransferase system, EIIB CF61_RS05790 PF02378 Phosphotransferase system, EIIC CF61_RS05795 PF00356 Bacterial regulatory proteins, lacI family CF61_RS05800 PF13247 4Fe-4S dicluster domain CF61_RS05800 PF12800 4Fe-4S binding domain CF61_RS05805 PF17788 HypF Kae1-like domain CF61_RS05805 PF00708 Acylphosphatase CF61_RS05805 PF07503 HypF finger CF61_RS05805 PF01300 Telomere recombination CF61_RS05810 PF18113 Rubredoxin binding C-terminal domain CF61_RS05810 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF61_RS05815 PF00301 Rubredoxin CF61_RS05815 PF00258 Flavodoxin CF61_RS05815 PF00753 Metallo-beta-lactamase superfamily CF61_RS05820 PF00158 Sigma-54 interaction domain CF61_RS05820 PF01590 GAF domain CF61_RS05825 PF00571 CBS domain CF61_RS05825 PF01380 SIS domain CF61_RS05830 PF00455 DeoR C terminal sensor domain CF61_RS05830 PF08220 DeoR-like helix-turn-helix domain CF61_RS05835 PF06923 Glucitol operon activator protein (GutM) CF61_RS05840 PF00106 short chain dehydrogenase CF61_RS05845 PF03829 PTS system glucitol/sorbitol-specific IIA component CF61_RS05850 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CF61_RS05850 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CF61_RS05855 PF03608 PTS system enzyme II sorbitol-specific factor CF61_RS05860 PF13406 Transglycosylase SLT domain CF61_RS05865 PF02464 Competence-damaged protein CF61_RS05870 PF00154 recA bacterial DNA recombination protein CF61_RS05875 PF02631 RecX family CF61_RS05885 PF01411 tRNA synthetases class II (A) CF61_RS05885 PF02272 DHHA1 domain CF61_RS05885 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CF61_RS05890 PF02599 Global regulator protein family CF61_RS05920 PF13419 Haloacid dehalogenase-like hydrolase CF61_RS05925 PF09335 SNARE associated Golgi protein CF61_RS05930 PF04262 Glutamate-cysteine ligase CF61_RS05935 PF02664 S-Ribosylhomocysteinase (LuxS) CF61_RS05940 PF07690 Major Facilitator Superfamily CF61_RS05945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF61_RS05945 PF00529 HlyD membrane-fusion protein of T1SS CF61_RS05950 PF01047 MarR family CF61_RS05955 PF05437 Branched-chain amino acid transport protein (AzlD) CF61_RS05960 PF03591 AzlC protein CF61_RS05965 PF07690 Major Facilitator Superfamily CF61_RS05970 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CF61_RS05975 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS05980 PF00005 ABC transporter CF61_RS05980 PF00571 CBS domain CF61_RS05985 PF00268 Ribonucleotide reductase, small chain CF61_RS05990 PF08343 Ribonucleotide reductase N-terminal CF61_RS05990 PF00317 Ribonucleotide reductase, all-alpha domain CF61_RS05990 PF02867 Ribonucleotide reductase, barrel domain CF61_RS05995 PF07972 NrdI Flavodoxin like CF61_RS06000 PF00462 Glutaredoxin CF61_RS06005 PF05957 Bacterial protein of unknown function (DUF883) CF61_RS06010 PF09400 Protein of unknown function (DUF2002) CF61_RS06015 PF06610 L-alanine exporter CF61_RS06020 PF00816 H-NS histone family CF61_RS06025 PF00581 Rhodanese-like domain CF61_RS06025 PF11127 Protein of unknown function (DUF2892) CF61_RS06030 PF01022 Bacterial regulatory protein, arsR family CF61_RS06035 PF01679 Proteolipid membrane potential modulator CF61_RS06040 PF04972 BON domain CF61_RS06040 PF01476 LysM domain CF61_RS06045 PF07729 FCD domain CF61_RS06045 PF00392 Bacterial regulatory proteins, gntR family CF61_RS06050 PF00324 Amino acid permease CF61_RS06055 PF00202 Aminotransferase class-III CF61_RS06060 PF00171 Aldehyde dehydrogenase family CF61_RS06065 PF01266 FAD dependent oxidoreductase CF61_RS06070 PF08943 CsiD CF61_RS06075 PF00128 Alpha amylase, catalytic domain CF61_RS06080 PF00128 Alpha amylase, catalytic domain CF61_RS06090 PF03400 IS1 transposase CF61_RS06095 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CF61_RS06095 PF11867 Domain of unknown function (DUF3387) CF61_RS06095 PF18766 SWI2/SNF2 ATPase CF61_RS06105 PF02384 N-6 DNA Methylase CF61_RS06115 PF02195 ParB-like nuclease domain CF61_RS06115 PF17762 HTH domain found in ParB protein CF61_RS06125 PF13356 Arm DNA-binding domain CF61_RS06125 PF00589 Phage integrase family CF61_RS06130 PF01668 SmpB protein CF61_RS06135 PF03364 Polyketide cyclase / dehydrase and lipid transport CF61_RS06140 PF03658 RnfH family Ubiquitin CF61_RS06145 PF04355 SmpA / OmlA family CF61_RS06150 PF02463 RecF/RecN/SMC N terminal domain CF61_RS06155 PF01513 ATP-NAD kinase CF61_RS06165 PF01025 GrpE CF61_RS06170 PF01595 Cyclin M transmembrane N-terminal domain CF61_RS06170 PF03471 Transporter associated domain CF61_RS06170 PF00571 CBS domain CF61_RS06175 PF01578 Cytochrome C assembly protein CF61_RS06180 PF02881 SRP54-type protein, helical bundle domain CF61_RS06180 PF00448 SRP54-type protein, GTPase domain CF61_RS06180 PF02978 Signal peptide binding domain CF61_RS06185 PF00886 Ribosomal protein S16 CF61_RS06190 PF05239 PRC-barrel domain CF61_RS06190 PF01782 RimM N-terminal domain CF61_RS06195 PF01746 tRNA (Guanine-1)-methyltransferase CF61_RS06200 PF01245 Ribosomal protein L19 CF61_RS06205 PF00691 OmpA family CF61_RS06210 PF17152 Periplasmic sensor domain CF61_RS06210 PF00990 Diguanylate cyclase, GGDEF domain CF61_RS06215 PF13689 YfiR/HmsC-like CF61_RS06220 PF10973 Protein of unknown function (DUF2799) CF61_RS06225 PF00793 DAHP synthetase I family CF61_RS06230 PF02153 Prephenate dehydrogenase CF61_RS06230 PF01817 Chorismate mutase type II CF61_RS06235 PF00800 Prephenate dehydratase CF61_RS06235 PF01817 Chorismate mutase type II CF61_RS06240 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CF61_RS06250 PF13525 Outer membrane lipoprotein CF61_RS06255 PF01479 S4 domain CF61_RS06255 PF00849 RNA pseudouridylate synthase CF61_RS06260 PF02578 Multi-copper polyphenol oxidoreductase laccase CF61_RS06265 PF02861 Clp amino terminal domain, pathogenicity island component CF61_RS06265 PF07724 AAA domain (Cdc48 subfamily) CF61_RS06265 PF00004 ATPase family associated with various cellular activities (AAA) CF61_RS06265 PF10431 C-terminal, D2-small domain, of ClpB protein CF61_RS06265 PF17871 AAA lid domain CF61_RS06295 PF00083 Sugar (and other) transporter CF61_RS06300 PF10043 Predicted periplasmic lipoprotein (DUF2279) CF61_RS06305 PF13091 PLD-like domain CF61_RS06310 PF13607 Succinyl-CoA ligase like flavodoxin domain CF61_RS06310 PF13380 CoA binding domain CF61_RS06310 PF00583 Acetyltransferase (GNAT) family CF61_RS06315 PF03942 DTW domain CF61_RS06320 PF00085 Thioredoxin CF61_RS06330 PF08032 RNA 2'-O ribose methyltransferase substrate binding CF61_RS06330 PF00588 SpoU rRNA Methylase family CF61_RS06335 PF03167 Uracil DNA glycosylase superfamily CF61_RS06340 PF01228 Glycine radical CF61_RS06345 PF01810 LysE type translocator CF61_RS06350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS06350 PF03466 LysR substrate binding domain CF61_RS06360 PF00270 DEAD/DEAH box helicase CF61_RS06360 PF00271 Helicase conserved C-terminal domain CF61_RS06365 PF05175 Methyltransferase small domain CF61_RS06370 PF02910 Fumarate reductase flavoprotein C-term CF61_RS06370 PF00890 FAD binding domain CF61_RS06380 PF08281 Sigma-70, region 4 CF61_RS06380 PF04542 Sigma-70 region 2 CF61_RS06385 PF03873 Anti sigma-E protein RseA, C-terminal domain CF61_RS06385 PF03872 Anti sigma-E protein RseA, N-terminal domain CF61_RS06390 PF17188 MucB/RseB C-terminal domain CF61_RS06390 PF03888 MucB/RseB N-terminal domain CF61_RS06400 PF00009 Elongation factor Tu GTP binding domain CF61_RS06400 PF06421 GTP-binding protein LepA C-terminus CF61_RS06400 PF03144 Elongation factor Tu domain 2 CF61_RS06400 PF00679 Elongation factor G C-terminus CF61_RS06405 PF10502 Signal peptidase, peptidase S26 CF61_RS06410 PF00035 Double-stranded RNA binding motif CF61_RS06410 PF14622 Ribonuclease-III-like CF61_RS06415 PF01926 50S ribosome-binding GTPase CF61_RS06415 PF07650 KH domain CF61_RS06420 PF02565 Recombination protein O C terminal CF61_RS06420 PF11967 Recombination protein O N terminal CF61_RS06425 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CF61_RS06430 PF01648 4'-phosphopantetheinyl transferase superfamily CF61_RS06450 PF12838 4Fe-4S dicluster domain CF61_RS06455 PF01418 Helix-turn-helix domain, rpiR family CF61_RS06455 PF01380 SIS domain CF61_RS06465 PF14437 MafB19-like deaminase CF61_RS06470 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF61_RS06470 PF01464 Transglycosylase SLT domain CF61_RS06475 PF02769 AIR synthase related protein, C-terminal domain CF61_RS06475 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CF61_RS06475 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CF61_RS06480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS06480 PF00512 His Kinase A (phospho-acceptor) domain CF61_RS06485 PF13942 YfhG lipoprotein CF61_RS06490 PF00072 Response regulator receiver domain CF61_RS06490 PF00158 Sigma-54 interaction domain CF61_RS06495 PF00543 Nitrogen regulatory protein P-II CF61_RS06500 PF00175 Oxidoreductase NAD-binding domain CF61_RS06500 PF00042 Globin CF61_RS06500 PF00970 Oxidoreductase FAD-binding domain CF61_RS06505 PF00464 Serine hydroxymethyltransferase CF61_RS06510 PF00480 ROK family CF61_RS06515 PF13181 Tetratricopeptide repeat CF61_RS06515 PF17128 Domain of unknown function (DUF5107) CF61_RS06520 PF13407 Periplasmic binding protein domain CF61_RS06525 PF00005 ABC transporter CF61_RS06530 PF02653 Branched-chain amino acid transport system / permease component CF61_RS06535 PF08240 Alcohol dehydrogenase GroES-like domain CF61_RS06535 PF00107 Zinc-binding dehydrogenase CF61_RS06540 PF01263 Aldose 1-epimerase CF61_RS06545 PF07681 DoxX CF61_RS06550 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF61_RS06550 PF14759 Reductase C-terminal CF61_RS06555 PF00106 short chain dehydrogenase CF61_RS06560 PF00355 Rieske [2Fe-2S] domain CF61_RS06565 PF00866 Ring hydroxylating beta subunit CF61_RS06570 PF00355 Rieske [2Fe-2S] domain CF61_RS06570 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CF61_RS06575 PF03466 LysR substrate binding domain CF61_RS06575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS06580 PF12832 MFS_1 like family CF61_RS06585 PF00874 PRD domain CF61_RS06590 PF12146 Serine aminopeptidase, S33 CF61_RS06595 PF00459 Inositol monophosphatase family CF61_RS06600 PF00588 SpoU rRNA Methylase family CF61_RS06605 PF02082 Transcriptional regulator CF61_RS06610 PF00266 Aminotransferase class-V CF61_RS06615 PF01592 NifU-like N terminal domain CF61_RS06620 PF01521 Iron-sulphur cluster biosynthesis CF61_RS06625 PF07743 HSCB C-terminal oligomerisation domain CF61_RS06630 PF00012 Hsp70 protein CF61_RS06635 PF00111 2Fe-2S iron-sulfur cluster binding domain CF61_RS06640 PF04384 Iron-sulphur cluster assembly CF61_RS06645 PF12404 Peptidase CF61_RS06645 PF00883 Cytosol aminopeptidase family, catalytic domain CF61_RS06650 PF07179 SseB protein N-terminal domain CF61_RS06650 PF14581 SseB protein C-terminal domain CF61_RS06655 PF00581 Rhodanese-like domain CF61_RS06660 PF07678 A-macroglobulin TED domain CF61_RS06660 PF01835 MG2 domain CF61_RS06660 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CF61_RS06660 PF17962 Bacterial macroglobulin domain 6 CF61_RS06660 PF00207 Alpha-2-macroglobulin family CF61_RS06660 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CF61_RS06660 PF07703 Alpha-2-macroglobulin bait region domain CF61_RS06660 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CF61_RS06660 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CF61_RS06665 PF06832 Penicillin-Binding Protein C-terminus Family CF61_RS06665 PF00905 Penicillin binding protein transpeptidase domain CF61_RS06665 PF00912 Transglycosylase CF61_RS06670 PF00334 Nucleoside diphosphate kinase CF61_RS06675 PF04055 Radical SAM superfamily CF61_RS06680 PF13464 Domain of unknown function (DUF4115) CF61_RS06685 PF04551 GcpE protein CF61_RS06690 PF13393 Histidyl-tRNA synthetase CF61_RS06690 PF03129 Anticodon binding domain CF61_RS06695 PF09976 Tetratricopeptide repeat-like domain CF61_RS06700 PF13360 PQQ-like domain CF61_RS06705 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CF61_RS06705 PF01926 50S ribosome-binding GTPase CF61_RS06710 PF07191 zinc-ribbons CF61_RS06715 PF02601 Exonuclease VII, large subunit CF61_RS06715 PF13742 OB-fold nucleic acid binding domain CF61_RS06720 PF00571 CBS domain CF61_RS06720 PF00478 IMP dehydrogenase / GMP reductase domain CF61_RS06725 PF00958 GMP synthase C terminal domain CF61_RS06725 PF00117 Glutamine amidotransferase class-I CF61_RS06725 PF02540 NAD synthase CF61_RS06730 PF17358 Family of unknown function (DUF5384) CF61_RS06735 PF05433 Glycine zipper 2TM domain CF61_RS06740 PF11119 Protein of unknown function (DUF2633) CF61_RS06750 PF05231 MASE1 CF61_RS06750 PF00563 EAL domain CF61_RS06755 PF02541 Ppx/GppA phosphatase family CF61_RS06760 PF02503 Polyphosphate kinase middle domain CF61_RS06760 PF13089 Polyphosphate kinase N-terminal domain CF61_RS06760 PF13090 Polyphosphate kinase C-terminal domain 2 CF61_RS06760 PF17941 Polyphosphate kinase C-terminal domain 1 CF61_RS06765 PF00551 Formyl transferase CF61_RS06770 PF00586 AIR synthase related protein, N-terminal domain CF61_RS06770 PF02769 AIR synthase related protein, C-terminal domain CF61_RS06780 PF00860 Permease family CF61_RS06785 PF00308 Bacterial dnaA protein CF61_RS06790 PF03960 ArsC family CF61_RS06795 PF01435 Peptidase family M48 CF61_RS06800 PF01594 AI-2E family transporter CF61_RS06805 PF01226 Formate/nitrite transporter CF61_RS06810 PF01590 GAF domain CF61_RS06810 PF00158 Sigma-54 interaction domain CF61_RS06815 PF07450 Formate hydrogenlyase maturation protein HycH CF61_RS06820 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CF61_RS06825 PF12838 4Fe-4S dicluster domain CF61_RS06830 PF00374 Nickel-dependent hydrogenase CF61_RS06830 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CF61_RS06830 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CF61_RS06835 PF00361 Proton-conducting membrane transporter CF61_RS06835 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CF61_RS06840 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CF61_RS06845 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CF61_RS06845 PF00361 Proton-conducting membrane transporter CF61_RS06850 PF00146 NADH dehydrogenase CF61_RS06855 PF00361 Proton-conducting membrane transporter CF61_RS06860 PF00361 Proton-conducting membrane transporter CF61_RS06865 PF12798 4Fe-4S binding domain CF61_RS06865 PF00037 4Fe-4S binding domain CF61_RS06870 PF00578 AhpC/TSA family CF61_RS06875 PF01842 ACT domain CF61_RS06880 PF00701 Dihydrodipicolinate synthetase family CF61_RS06885 PF06804 NlpB/DapX lipoprotein CF61_RS06895 PF01259 SAICAR synthetase CF61_RS06900 PF04228 Putative neutral zinc metallopeptidase CF61_RS06905 PF08351 Domain of unknown function (DUF1726) CF61_RS06905 PF13718 GNAT acetyltransferase 2 CF61_RS06905 PF05127 Helicase CF61_RS06905 PF17176 tRNA-binding domain CF61_RS06910 PF02230 Phospholipase/Carboxylesterase CF61_RS06915 PF13980 Uncharacterised protein family (UPF0370) CF61_RS06920 PF01546 Peptidase family M20/M25/M40 CF61_RS06920 PF07687 Peptidase dimerisation domain CF61_RS06925 PF03960 ArsC family CF61_RS06935 PF00873 AcrB/AcrD/AcrF family CF61_RS06940 PF07730 Histidine kinase CF61_RS06940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS06940 PF00672 HAMP domain CF61_RS06940 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CF61_RS06945 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CF61_RS06945 PF13247 4Fe-4S dicluster domain CF61_RS06945 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF61_RS06950 PF00293 NUDIX domain CF61_RS06955 PF06674 Protein of unknown function (DUF1176) CF61_RS06960 PF02779 Transketolase, pyrimidine binding domain CF61_RS06960 PF00456 Transketolase, thiamine diphosphate binding domain CF61_RS06960 PF02780 Transketolase, C-terminal domain CF61_RS06965 PF00923 Transaldolase/Fructose-6-phosphate aldolase CF61_RS06970 PF01515 Phosphate acetyl/butaryl transferase CF61_RS06970 PF03949 Malic enzyme, NAD binding domain CF61_RS06970 PF00390 Malic enzyme, N-terminal domain CF61_RS06975 PF00936 BMC domain CF61_RS06980 PF10662 Ethanolamine utilisation - propanediol utilisation CF61_RS06985 PF06249 Ethanolamine utilisation protein EutQ CF61_RS06990 PF01923 Cobalamin adenosyltransferase CF61_RS06995 PF01515 Phosphate acetyl/butaryl transferase CF61_RS07000 PF00936 BMC domain CF61_RS07005 PF03319 Ethanolamine utilisation protein EutN/carboxysome CF61_RS07010 PF00171 Aldehyde dehydrogenase family CF61_RS07020 PF00465 Iron-containing alcohol dehydrogenase CF61_RS07025 PF04346 Ethanolamine utilisation protein, EutH CF61_RS07030 PF06277 Ethanolamine utilisation protein EutA CF61_RS07035 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CF61_RS07040 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CF61_RS07050 PF00936 BMC domain CF61_RS07050 PF16365 Ethanolamine utilization protein EutK C-terminus CF61_RS07055 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CF61_RS07065 PF00936 BMC domain CF61_RS07070 PF00936 BMC domain CF61_RS07070 PF16365 Ethanolamine utilization protein EutK C-terminus CF61_RS07075 PF12833 Helix-turn-helix domain CF61_RS07080 PF01218 Coproporphyrinogen III oxidase CF61_RS07085 PF01520 N-acetylmuramoyl-L-alanine amidase CF61_RS07090 PF00583 Acetyltransferase (GNAT) family CF61_RS07095 PF11143 Protein of unknown function (DUF2919) CF61_RS07100 PF06572 Protein of unknown function (DUF1131) CF61_RS07105 PF04261 Dyp-type peroxidase family CF61_RS07110 PF00144 Beta-lactamase CF61_RS07115 PF02378 Phosphotransferase system, EIIC CF61_RS07115 PF00367 phosphotransferase system, EIIB CF61_RS07120 PF01380 SIS domain CF61_RS07125 PF01418 Helix-turn-helix domain, rpiR family CF61_RS07125 PF01380 SIS domain CF61_RS07140 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS07145 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS07150 PF00005 ABC transporter CF61_RS07155 PF00291 Pyridoxal-phosphate dependent enzyme CF61_RS07160 PF05406 WGR domain CF61_RS07165 PF17263 Family of unknown function (DUF5329) CF61_RS07170 PF08543 Phosphomethylpyrimidine kinase CF61_RS07175 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CF61_RS07180 PF05524 PEP-utilising enzyme, N-terminal CF61_RS07180 PF00391 PEP-utilising enzyme, mobile domain CF61_RS07180 PF02896 PEP-utilising enzyme, TIM barrel domain CF61_RS07185 PF00381 PTS HPr component phosphorylation site CF61_RS07190 PF00291 Pyridoxal-phosphate dependent enzyme CF61_RS07200 PF04354 ZipA, C-terminal FtsZ-binding domain CF61_RS07205 PF01653 NAD-dependent DNA ligase adenylation domain CF61_RS07205 PF03120 NAD-dependent DNA ligase OB-fold domain CF61_RS07205 PF00533 BRCA1 C Terminus (BRCT) domain CF61_RS07205 PF12826 Helix-hairpin-helix motif CF61_RS07205 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CF61_RS07210 PF12843 Putative quorum-sensing-regulated virulence factor CF61_RS07215 PF13593 SBF-like CPA transporter family (DUF4137) CF61_RS07220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS07220 PF03466 LysR substrate binding domain CF61_RS07230 PF01048 Phosphorylase superfamily CF61_RS07235 PF03825 Nucleoside H+ symporter CF61_RS07245 PF03466 LysR substrate binding domain CF61_RS07245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS07270 PF00749 tRNA synthetases class I (E and Q), catalytic domain CF61_RS07275 PF07037 Putative transcription regulator (DUF1323) CF61_RS07280 PF07037 Putative transcription regulator (DUF1323) CF61_RS07295 PF05231 MASE1 CF61_RS07295 PF00563 EAL domain CF61_RS07300 PF07662 Na+ dependent nucleoside transporter C-terminus CF61_RS07300 PF07670 Nucleoside recognition CF61_RS07300 PF01773 Na+ dependent nucleoside transporter N-terminus CF61_RS07305 PF01566 Natural resistance-associated macrophage protein CF61_RS07315 PF10697 Protein of unknown function (DUF2502) CF61_RS07320 PF00654 Voltage gated chloride channel CF61_RS07325 PF02685 Glucokinase CF61_RS07330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF61_RS07335 PF02378 Phosphotransferase system, EIIC CF61_RS07340 PF00557 Metallopeptidase family M24 CF61_RS07340 PF01321 Creatinase/Prolidase N-terminal domain CF61_RS07345 PF05343 M42 glutamyl aminopeptidase CF61_RS07350 PF00381 PTS HPr component phosphorylation site CF61_RS07350 PF05524 PEP-utilising enzyme, N-terminal CF61_RS07350 PF00391 PEP-utilising enzyme, mobile domain CF61_RS07350 PF02896 PEP-utilising enzyme, TIM barrel domain CF61_RS07350 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF61_RS07355 PF12833 Helix-turn-helix domain CF61_RS07360 PF00072 Response regulator receiver domain CF61_RS07360 PF04397 LytTr DNA-binding domain CF61_RS07365 PF07694 5TMR of 5TMR-LYT CF61_RS07365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS07365 PF06580 Histidine kinase CF61_RS07370 PF00155 Aminotransferase class I and II CF61_RS07375 PF03279 Bacterial lipid A biosynthesis acyltransferase CF61_RS07380 PF10810 Protein of unknown function (DUF2545) CF61_RS07395 PF10938 YfdX protein CF61_RS07400 PF02515 CoA-transferase family III CF61_RS07405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CF61_RS07405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CF61_RS07405 PF00205 Thiamine pyrophosphate enzyme, central domain CF61_RS07410 PF03547 Membrane transport protein CF61_RS07415 PF02515 CoA-transferase family III CF61_RS07420 PF01627 Hpt domain CF61_RS07420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS07420 PF00512 His Kinase A (phospho-acceptor) domain CF61_RS07420 PF00072 Response regulator receiver domain CF61_RS07420 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF61_RS07425 PF00196 Bacterial regulatory proteins, luxR family CF61_RS07425 PF00072 Response regulator receiver domain CF61_RS07430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF61_RS07430 PF00529 HlyD membrane-fusion protein of T1SS CF61_RS07435 PF07690 Major Facilitator Superfamily CF61_RS07440 PF00291 Pyridoxal-phosphate dependent enzyme CF61_RS07445 PF02447 GntP family permease CF61_RS07450 PF03466 LysR substrate binding domain CF61_RS07450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS07525 PF00717 Peptidase S24-like CF61_RS07525 PF01381 Helix-turn-helix CF61_RS07585 PF06440 DNA polymerase III, theta subunit CF61_RS07630 PF00959 Phage lysozyme CF61_RS07635 PF03245 Bacteriophage Rz lysis protein CF61_RS07650 PF17288 Terminase RNAseH like domain CF61_RS07650 PF04466 Phage terminase large subunit CF61_RS07655 PF06381 Protein of unknown function (DUF1073) CF61_RS07800 PF00717 Peptidase S24-like CF61_RS07810 PF13356 Arm DNA-binding domain CF61_RS07810 PF14659 Phage integrase, N-terminal SAM-like domain CF61_RS07810 PF00589 Phage integrase family CF61_RS07820 PF01226 Formate/nitrite transporter CF61_RS07825 PF04333 MlaA lipoprotein CF61_RS07835 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CF61_RS07840 PF04175 Protein of unknown function (DUF406) CF61_RS07845 PF00108 Thiolase, N-terminal domain CF61_RS07845 PF02803 Thiolase, C-terminal domain CF61_RS07850 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CF61_RS07850 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CF61_RS07850 PF00378 Enoyl-CoA hydratase/isomerase CF61_RS07855 PF00300 Histidine phosphatase superfamily (branch 1) CF61_RS07860 PF00419 Fimbrial protein CF61_RS07865 PF13953 PapC C-terminal domain CF61_RS07865 PF00577 Outer membrane usher protein CF61_RS07865 PF13954 PapC N-terminal domain CF61_RS07870 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF61_RS07870 PF02753 Pili assembly chaperone PapD, C-terminal domain CF61_RS07875 PF00419 Fimbrial protein CF61_RS07880 PF00419 Fimbrial protein CF61_RS07885 PF00419 Fimbrial protein CF61_RS07890 PF11245 Protein of unknown function (DUF2544) CF61_RS07895 PF01713 Smr domain CF61_RS07900 PF05175 Methyltransferase small domain CF61_RS07905 PF01264 Chorismate synthase CF61_RS07910 PF03411 Penicillin-insensitive murein endopeptidase CF61_RS07915 PF01925 Sulfite exporter TauE/SafE CF61_RS07920 PF04315 Elongation factor P hydroxylase CF61_RS07925 PF08891 YfcL protein CF61_RS07930 PF01266 FAD dependent oxidoreductase CF61_RS07930 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CF61_RS07935 PF02801 Beta-ketoacyl synthase, C-terminal domain CF61_RS07935 PF00109 Beta-ketoacyl synthase, N-terminal domain CF61_RS07940 PF07690 Major Facilitator Superfamily CF61_RS07950 PF11890 Domain of unknown function (DUF3410) CF61_RS07950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CF61_RS07950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CF61_RS07955 PF01118 Semialdehyde dehydrogenase, NAD binding domain CF61_RS07955 PF02774 Semialdehyde dehydrogenase, dimerisation domain CF61_RS07960 PF01416 tRNA pseudouridine synthase CF61_RS07965 PF09335 SNARE associated Golgi protein CF61_RS07970 PF17848 Acetyl-coA carboxylase zinc finger domain CF61_RS07970 PF01039 Carboxyl transferase domain CF61_RS07975 PF08245 Mur ligase middle domain CF61_RS07975 PF02875 Mur ligase family, glutamate ligase domain CF61_RS07980 PF05036 Sporulation related domain CF61_RS07985 PF02674 Colicin V production protein CF61_RS07990 PF00156 Phosphoribosyl transferase domain CF61_RS07995 PF02441 Flavoprotein CF61_RS08000 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF61_RS08005 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF61_RS08010 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS08015 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS08020 PF00005 ABC transporter CF61_RS08030 PF08338 Domain of unknown function (DUF1731) CF61_RS08030 PF01370 NAD dependent epimerase/dehydratase family CF61_RS08035 PF02152 Dihydroneopterin aldolase CF61_RS08040 PF02798 Glutathione S-transferase, N-terminal domain CF61_RS08040 PF00043 Glutathione S-transferase, C-terminal domain CF61_RS08045 PF14834 Glutathione S-transferase, C-terminal domain CF61_RS08045 PF02798 Glutathione S-transferase, N-terminal domain CF61_RS08050 PF12850 Calcineurin-like phosphoesterase superfamily domain CF61_RS08055 PF00293 NUDIX domain CF61_RS08060 PF03606 C4-dicarboxylate anaerobic carrier CF61_RS08065 PF07085 DRTGG domain CF61_RS08065 PF01515 Phosphate acetyl/butaryl transferase CF61_RS08070 PF00871 Acetokinase family CF61_RS08080 PF04217 Protein of unknown function, DUF412 CF61_RS08085 PF03887 YfbU domain CF61_RS08090 PF13419 Haloacid dehalogenase-like hydrolase CF61_RS08095 PF02080 TrkA-C domain CF61_RS08095 PF03600 Citrate transporter CF61_RS08105 PF00155 Aminotransferase class I and II CF61_RS08110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS08110 PF03466 LysR substrate binding domain CF61_RS08115 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CF61_RS08120 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CF61_RS08125 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CF61_RS08125 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CF61_RS08135 PF10531 SLBB domain CF61_RS08135 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CF61_RS08135 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CF61_RS08140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF61_RS08140 PF00384 Molybdopterin oxidoreductase CF61_RS08140 PF01568 Molydopterin dinucleotide binding domain CF61_RS08140 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CF61_RS08145 PF00146 NADH dehydrogenase CF61_RS08150 PF12838 4Fe-4S dicluster domain CF61_RS08155 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CF61_RS08160 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CF61_RS08165 PF00361 Proton-conducting membrane transporter CF61_RS08165 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CF61_RS08170 PF00361 Proton-conducting membrane transporter CF61_RS08175 PF00361 Proton-conducting membrane transporter CF61_RS08180 PF08974 Domain of unknown function (DUF1877) CF61_RS08185 PF04389 Peptidase family M28 CF61_RS08190 PF02902 Ulp1 protease family, C-terminal catalytic domain CF61_RS08195 PF12706 Beta-lactamase superfamily domain CF61_RS08200 PF13673 Acetyltransferase (GNAT) domain CF61_RS08205 PF05957 Bacterial protein of unknown function (DUF883) CF61_RS08210 PF00425 chorismate binding enzyme CF61_RS08215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CF61_RS08215 PF16582 Middle domain of thiamine pyrophosphate CF61_RS08215 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CF61_RS08220 PF12697 Alpha/beta hydrolase family CF61_RS08225 PF00378 Enoyl-CoA hydratase/isomerase CF61_RS08230 PF13378 Enolase C-terminal domain-like CF61_RS08235 PF13193 AMP-binding enzyme C-terminal domain CF61_RS08235 PF00501 AMP-binding enzyme CF61_RS08250 PF00892 EamA-like transporter family CF61_RS08255 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CF61_RS08260 PF01522 Polysaccharide deacetylase CF61_RS08265 PF02911 Formyl transferase, C-terminal domain CF61_RS08265 PF01370 NAD dependent epimerase/dehydratase family CF61_RS08265 PF00551 Formyl transferase CF61_RS08270 PF00535 Glycosyl transferase family 2 CF61_RS08275 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CF61_RS08280 PF00300 Histidine phosphatase superfamily (branch 1) CF61_RS08285 PF00293 NUDIX domain CF61_RS08290 PF07437 YfaZ precursor CF61_RS08295 PF00994 Probable molybdopterin binding domain CF61_RS08300 PF01614 Bacterial transcriptional regulator CF61_RS08300 PF09339 IclR helix-turn-helix domain CF61_RS08305 PF13378 Enolase C-terminal domain-like CF61_RS08305 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CF61_RS08315 PF03328 HpcH/HpaI aldolase/citrate lyase family CF61_RS08320 PF04754 Putative transposase, YhgA-like CF61_RS08325 PF13183 4Fe-4S dicluster domain CF61_RS08325 PF02754 Cysteine-rich domain CF61_RS08330 PF00890 FAD binding domain CF61_RS08335 PF04324 BFD-like [2Fe-2S] binding domain CF61_RS08335 PF01266 FAD dependent oxidoreductase CF61_RS08340 PF07690 Major Facilitator Superfamily CF61_RS08345 PF03009 Glycerophosphoryl diester phosphodiesterase family CF61_RS08360 PF00111 2Fe-2S iron-sulfur cluster binding domain CF61_RS08365 PF00268 Ribonucleotide reductase, small chain CF61_RS08370 PF00317 Ribonucleotide reductase, all-alpha domain CF61_RS08370 PF03477 ATP cone domain CF61_RS08370 PF02867 Ribonucleotide reductase, barrel domain CF61_RS08380 PF03797 Autotransporter beta-domain CF61_RS08380 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat CF61_RS08380 PF12951 Passenger-associated-transport-repeat CF61_RS08390 PF03989 DNA gyrase C-terminal domain, beta-propeller CF61_RS08390 PF00521 DNA gyrase/topoisomerase IV, subunit A CF61_RS08395 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) CF61_RS08400 PF06672 Protein of unknown function (DUF1175) CF61_RS08405 PF07703 Alpha-2-macroglobulin bait region domain CF61_RS08405 PF01835 MG2 domain CF61_RS08405 PF00207 Alpha-2-macroglobulin family CF61_RS08410 PF08486 Stage II sporulation protein CF61_RS08410 PF10062 Predicted secreted protein (DUF2300) CF61_RS08415 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) CF61_RS08420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS08420 PF00512 His Kinase A (phospho-acceptor) domain CF61_RS08420 PF09456 RcsC Alpha-Beta-Loop (ABL) CF61_RS08420 PF00072 Response regulator receiver domain CF61_RS08425 PF00196 Bacterial regulatory proteins, luxR family CF61_RS08425 PF00072 Response regulator receiver domain CF61_RS08430 PF16359 RcsD-ABL domain CF61_RS08430 PF01627 Hpt domain CF61_RS08430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS08445 PF00267 Gram-negative porin CF61_RS08450 PF02424 ApbE family CF61_RS08455 PF02805 Metal binding domain of Ada CF61_RS08455 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CF61_RS08455 PF12833 Helix-turn-helix domain CF61_RS08455 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CF61_RS08460 PF13532 2OG-Fe(II) oxygenase superfamily CF61_RS08465 PF00005 ABC transporter CF61_RS08470 PF06039 Malate:quinone oxidoreductase (Mqo) CF61_RS08475 PF03974 Ecotin CF61_RS08485 PF13187 4Fe-4S dicluster domain CF61_RS08485 PF12800 4Fe-4S binding domain CF61_RS08485 PF00037 4Fe-4S binding domain CF61_RS08490 PF03927 NapD protein CF61_RS08495 PF00384 Molybdopterin oxidoreductase CF61_RS08495 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF61_RS08495 PF01568 Molydopterin dinucleotide binding domain CF61_RS08500 PF12838 4Fe-4S dicluster domain CF61_RS08500 PF12800 4Fe-4S binding domain CF61_RS08505 PF12801 4Fe-4S binding domain CF61_RS08505 PF13237 4Fe-4S dicluster domain CF61_RS08510 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CF61_RS08515 PF03264 NapC/NirT cytochrome c family, N-terminal region CF61_RS08520 PF00005 ABC transporter CF61_RS08525 PF03379 CcmB protein CF61_RS08530 PF01578 Cytochrome C assembly protein CF61_RS08535 PF04995 Heme exporter protein D (CcmD) CF61_RS08540 PF03100 CcmE CF61_RS08545 PF01578 Cytochrome C assembly protein CF61_RS08545 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CF61_RS08550 PF08534 Redoxin CF61_RS08555 PF03918 Cytochrome C biogenesis protein CF61_RS08560 PF00072 Response regulator receiver domain CF61_RS08560 PF00196 Bacterial regulatory proteins, luxR family CF61_RS08580 PF00884 Sulfatase CF61_RS08580 PF11893 Domain of unknown function (DUF3413) CF61_RS08585 PF07208 Protein of unknown function (DUF1414) CF61_RS08590 PF04245 37-kD nucleoid-associated bacterial protein CF61_RS08595 PF01386 Ribosomal L25p family CF61_RS08600 PF00271 Helicase conserved C-terminal domain CF61_RS08600 PF04851 Type III restriction enzyme, res subunit CF61_RS08605 PF00849 RNA pseudouridylate synthase CF61_RS08605 PF01479 S4 domain CF61_RS08610 PF07690 Major Facilitator Superfamily CF61_RS08615 PF13989 YejG-like protein CF61_RS08620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF61_RS08620 PF00005 ABC transporter CF61_RS08625 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS08625 PF12911 N-terminal TM domain of oligopeptide transport permease C CF61_RS08630 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS08635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF61_RS08640 PF12792 CSS motif domain associated with EAL CF61_RS08640 PF00563 EAL domain CF61_RS08645 PF00877 NlpC/P60 family CF61_RS08650 PF01569 PAP2 superfamily CF61_RS08655 PF02492 CobW/HypB/UreG, nucleotide-binding domain CF61_RS08655 PF07683 Cobalamin synthesis protein cobW C-terminal domain CF61_RS08660 PF01232 Mannitol dehydrogenase Rossmann domain CF61_RS08660 PF08125 Mannitol dehydrogenase C-terminal domain CF61_RS08665 PF09285 Elongation factor P, C-terminal CF61_RS08665 PF08207 Elongation factor P (EF-P) KOW-like domain CF61_RS08665 PF01132 Elongation factor P (EF-P) OB domain CF61_RS08670 PF03692 Putative zinc- or iron-chelating domain CF61_RS08675 PF07690 Major Facilitator Superfamily CF61_RS08680 PF00381 PTS HPr component phosphorylation site CF61_RS08680 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF61_RS08685 PF00294 pfkB family carbohydrate kinase CF61_RS08690 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF61_RS08690 PF02378 Phosphotransferase system, EIIC CF61_RS08695 PF00294 pfkB family carbohydrate kinase CF61_RS08700 PF04227 Indigoidine synthase A like protein CF61_RS08705 PF07662 Na+ dependent nucleoside transporter C-terminus CF61_RS08705 PF01773 Na+ dependent nucleoside transporter N-terminus CF61_RS08710 PF00027 Cyclic nucleotide-binding domain CF61_RS08715 PF01156 Inosine-uridine preferring nucleoside hydrolase CF61_RS08720 PF07662 Na+ dependent nucleoside transporter C-terminus CF61_RS08720 PF01773 Na+ dependent nucleoside transporter N-terminus CF61_RS08725 PF00294 pfkB family carbohydrate kinase CF61_RS08730 PF01261 Xylose isomerase-like TIM barrel CF61_RS08735 PF03601 Conserved hypothetical protein 698 CF61_RS08740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS08740 PF03466 LysR substrate binding domain CF61_RS08745 PF00324 Amino acid permease CF61_RS08750 PF00593 TonB dependent receptor CF61_RS08750 PF07715 TonB-dependent Receptor Plug Domain CF61_RS08755 PF00756 Putative esterase CF61_RS08765 PF01227 GTP cyclohydrolase I CF61_RS08770 PF04235 Protein of unknown function (DUF418) CF61_RS08780 PF00356 Bacterial regulatory proteins, lacI family CF61_RS08785 PF13407 Periplasmic binding protein domain CF61_RS08790 PF00005 ABC transporter CF61_RS08795 PF02653 Branched-chain amino acid transport system / permease component CF61_RS08800 PF01180 Dihydroorotate dehydrogenase CF61_RS08805 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF61_RS08805 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CF61_RS08810 PF10808 Protein of unknown function (DUF2542) CF61_RS08815 PF02698 DUF218 domain CF61_RS08820 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CF61_RS08820 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CF61_RS08825 PF04172 LrgB-like family CF61_RS08830 PF03788 LrgA family CF61_RS08835 PF01207 Dihydrouridine synthase (Dus) CF61_RS08845 PF02321 Outer membrane efflux protein CF61_RS08855 PF09335 SNARE associated Golgi protein CF61_RS08860 PF04893 Yip1 domain CF61_RS08865 PF00768 D-alanyl-D-alanine carboxypeptidase CF61_RS08870 PF09330 D-lactate dehydrogenase, membrane binding CF61_RS08870 PF01565 FAD binding domain CF61_RS08875 PF00933 Glycosyl hydrolase family 3 N terminal domain CF61_RS08875 PF01915 Glycosyl hydrolase family 3 C-terminal domain CF61_RS08875 PF14310 Fibronectin type III-like domain CF61_RS08880 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CF61_RS08885 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS08890 PF00005 ABC transporter CF61_RS08895 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS08905 PF13411 MerR HTH family regulatory protein CF61_RS08910 PF07694 5TMR of 5TMR-LYT CF61_RS08910 PF06580 Histidine kinase CF61_RS08915 PF04397 LytTr DNA-binding domain CF61_RS08915 PF00072 Response regulator receiver domain CF61_RS08920 PF07308 Protein of unknown function (DUF1456) CF61_RS08925 PF06998 Protein of unknown function (DUF1307) CF61_RS08930 PF04434 SWIM zinc finger CF61_RS08935 PF05762 VWA domain containing CoxE-like protein CF61_RS08945 PF07728 AAA domain (dynein-related subfamily) CF61_RS08955 PF13569 Domain of unknown function (DUF4132) CF61_RS08960 PF13569 Domain of unknown function (DUF4132) CF61_RS08965 PF09334 tRNA synthetases class I (M) CF61_RS08965 PF01588 Putative tRNA binding domain CF61_RS08970 PF10609 NUBPL iron-transfer P-loop NTPase CF61_RS08975 PF10836 Protein of unknown function (DUF2574) CF61_RS08985 PF00419 Fimbrial protein CF61_RS08990 PF03400 IS1 transposase CF61_RS08995 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF61_RS08995 PF02753 Pili assembly chaperone PapD, C-terminal domain CF61_RS09000 PF00577 Outer membrane usher protein CF61_RS09000 PF13953 PapC C-terminal domain CF61_RS09000 PF13954 PapC N-terminal domain CF61_RS09005 PF00419 Fimbrial protein CF61_RS09010 PF11776 Nickel/cobalt transporter regulator CF61_RS09015 PF03824 High-affinity nickel-transport protein CF61_RS09020 PF02583 Metal-sensitive transcriptional repressor CF61_RS09025 PF02110 Hydroxyethylthiazole kinase family CF61_RS09030 PF08543 Phosphomethylpyrimidine kinase CF61_RS09035 PF01183 Glycosyl hydrolases family 25 CF61_RS09040 PF07702 UTRA domain CF61_RS09040 PF00392 Bacterial regulatory proteins, gntR family CF61_RS09045 PF00294 pfkB family carbohydrate kinase CF61_RS09050 PF03747 ADP-ribosylglycohydrolase CF61_RS09055 PF03825 Nucleoside H+ symporter CF61_RS09060 PF01791 DeoC/LacD family aldolase CF61_RS09065 PF01116 Fructose-bisphosphate aldolase class-II CF61_RS09075 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF61_RS09080 PF03400 IS1 transposase CF61_RS09085 PF03611 PTS system sugar-specific permease component CF61_RS09090 PF08240 Alcohol dehydrogenase GroES-like domain CF61_RS09090 PF00107 Zinc-binding dehydrogenase CF61_RS09095 PF03400 IS1 transposase CF61_RS09100 PF08240 Alcohol dehydrogenase GroES-like domain CF61_RS09100 PF00107 Zinc-binding dehydrogenase CF61_RS09105 PF08220 DeoR-like helix-turn-helix domain CF61_RS09110 PF00781 Diacylglycerol kinase catalytic domain CF61_RS09125 PF16325 Peptidase family U32 C-terminal domain CF61_RS09125 PF01136 Peptidase family U32 CF61_RS09135 PF07411 Domain of unknown function (DUF1508) CF61_RS09140 PF00072 Response regulator receiver domain CF61_RS09140 PF00486 Transcriptional regulatory protein, C terminal CF61_RS09145 PF00512 His Kinase A (phospho-acceptor) domain CF61_RS09145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS09145 PF00672 HAMP domain CF61_RS09150 PF07690 Major Facilitator Superfamily CF61_RS09155 PF00873 AcrB/AcrD/AcrF family CF61_RS09160 PF00873 AcrB/AcrD/AcrF family CF61_RS09165 PF13533 Biotin-lipoyl like CF61_RS09170 PF00092 von Willebrand factor type A domain CF61_RS09185 PF00012 Hsp70 protein CF61_RS09190 PF00730 HhH-GPD superfamily base excision DNA repair protein CF61_RS09190 PF06029 AlkA N-terminal domain CF61_RS09195 PF13426 PAS domain CF61_RS09195 PF00563 EAL domain CF61_RS09195 PF08448 PAS fold CF61_RS09195 PF08447 PAS fold CF61_RS09195 PF00990 Diguanylate cyclase, GGDEF domain CF61_RS09195 PF05231 MASE1 CF61_RS09200 PF00485 Phosphoribulokinase / Uridine kinase family CF61_RS09205 PF00692 dUTPase CF61_RS09210 PF05170 AsmA family CF61_RS09225 PF03471 Transporter associated domain CF61_RS09225 PF00571 CBS domain CF61_RS09225 PF03741 Integral membrane protein TerC family CF61_RS09230 PF00483 Nucleotidyl transferase CF61_RS09235 PF01569 PAP2 superfamily CF61_RS09240 PF14052 Capsule assembly protein Wzi CF61_RS09245 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CF61_RS09245 PF10531 SLBB domain CF61_RS09245 PF02563 Polysaccharide biosynthesis/export protein CF61_RS09250 PF01451 Low molecular weight phosphotyrosine protein phosphatase CF61_RS09255 PF13614 AAA domain CF61_RS09255 PF02706 Chain length determinant protein CF61_RS09255 PF13807 G-rich domain on putative tyrosine kinase CF61_RS09280 PF02397 Bacterial sugar transferase CF61_RS09285 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CF61_RS09285 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CF61_RS09290 PF03400 IS1 transposase CF61_RS09300 PF01050 Mannose-6-phosphate isomerase CF61_RS09300 PF00483 Nucleotidyl transferase CF61_RS09305 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CF61_RS09305 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CF61_RS09305 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CF61_RS09305 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CF61_RS09315 PF00005 ABC transporter CF61_RS09320 PF13847 Methyltransferase domain CF61_RS09320 PF00069 Protein kinase domain CF61_RS09325 PF00534 Glycosyl transferases group 1 CF61_RS09325 PF13439 Glycosyltransferase Family 4 CF61_RS09330 PF00534 Glycosyl transferases group 1 CF61_RS09330 PF00862 Sucrose synthase CF61_RS09340 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CF61_RS09340 PF01502 Phosphoribosyl-AMP cyclohydrolase CF61_RS09345 PF00977 Histidine biosynthesis protein CF61_RS09350 PF00977 Histidine biosynthesis protein CF61_RS09355 PF00117 Glutamine amidotransferase class-I CF61_RS09360 PF00475 Imidazoleglycerol-phosphate dehydratase CF61_RS09360 PF08645 Polynucleotide kinase 3 phosphatase CF61_RS09365 PF00155 Aminotransferase class I and II CF61_RS09370 PF00815 Histidinol dehydrogenase CF61_RS09375 PF08029 HisG, C-terminal domain CF61_RS09375 PF01634 ATP phosphoribosyltransferase CF61_RS09380 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CF61_RS09385 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system CF61_RS09390 PF01370 NAD dependent epimerase/dehydratase family CF61_RS09395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS09395 PF03466 LysR substrate binding domain CF61_RS09400 PF13520 Amino acid permease CF61_RS09405 PF04143 Sulphur transport CF61_RS09410 PF01206 Sulfurtransferase TusA CF61_RS09415 PF08411 Exonuclease C-terminal CF61_RS09415 PF00929 Exonuclease CF61_RS09420 PF07943 Penicillin-binding protein 5, C-terminal domain CF61_RS09420 PF00768 D-alanyl-D-alanine carboxypeptidase CF61_RS09425 PF06445 GyrI-like small molecule binding domain CF61_RS09430 PF04632 Fusaric acid resistance protein family CF61_RS09435 PF04363 Protein of unknown function (DUF496) CF61_RS09440 PF10662 Ethanolamine utilisation - propanediol utilisation CF61_RS09445 PF01548 Transposase CF61_RS09445 PF02371 Transposase IS116/IS110/IS902 family CF61_RS09465 PF05321 Haemolysin expression modulating protein CF61_RS09475 PF00665 Integrase core domain CF61_RS09475 PF13276 HTH-like domain CF61_RS09480 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CF61_RS09485 PF02654 Cobalamin-5-phosphate synthase CF61_RS09490 PF02277 Phosphoribosyltransferase CF61_RS09495 PF03734 L,D-transpeptidase catalytic domain CF61_RS09495 PF17969 L,D-transpeptidase C-terminal domain CF61_RS09505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS09505 PF03466 LysR substrate binding domain CF61_RS09510 PF03466 LysR substrate binding domain CF61_RS09510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS09530 PF03400 IS1 transposase CF61_RS09535 PF01709 Transcriptional regulator CF61_RS09540 PF01048 Phosphorylase superfamily CF61_RS09540 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CF61_RS09545 PF07690 Major Facilitator Superfamily CF61_RS09545 PF00083 Sugar (and other) transporter CF61_RS09555 PF11924 Inverse autotransporter, beta-domain CF61_RS09555 PF09134 Invasin, domain 3 CF61_RS09555 PF02369 Bacterial Ig-like domain (group 1) CF61_RS09565 PF06167 Glucose-regulated metallo-peptidase M90 CF61_RS09580 PF01292 Prokaryotic cytochrome b561 CF61_RS09585 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CF61_RS09590 PF01794 Ferric reductase like transmembrane component CF61_RS09595 PF00174 Oxidoreductase molybdopterin binding domain CF61_RS09600 PF00576 HIUase/Transthyretin family CF61_RS09605 PF00486 Transcriptional regulatory protein, C terminal CF61_RS09605 PF00072 Response regulator receiver domain CF61_RS09610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS09610 PF00512 His Kinase A (phospho-acceptor) domain CF61_RS09625 PF00267 Gram-negative porin CF61_RS09640 PF01966 HD domain CF61_RS09645 PF00145 C-5 cytosine-specific DNA methylase CF61_RS09645 PF18284 DNA methylase N-terminal domain CF61_RS09650 PF03852 DNA mismatch endonuclease Vsr CF61_RS09655 PF00892 EamA-like transporter family CF61_RS09660 PF05661 Protein of unknown function (DUF808) CF61_RS09665 PF09926 Uncharacterized small protein (DUF2158) CF61_RS09680 PF10733 Protein of unknown function (DUF2525) CF61_RS09685 PF10781 Dextransucrase DSRB CF61_RS09695 PF03400 IS1 transposase CF61_RS09700 PF02049 Flagellar hook-basal body complex protein FliE CF61_RS09710 PF00893 Small Multidrug Resistance protein CF61_RS09715 PF01161 Phosphatidylethanolamine-binding protein CF61_RS09720 PF12833 Helix-turn-helix domain CF61_RS09730 PF01797 Transposase IS200 like CF61_RS09735 PF07282 Putative transposase DNA-binding domain CF61_RS09735 PF12323 Helix-turn-helix domain CF61_RS09735 PF01385 Probable transposase CF61_RS09740 PF02586 SOS response associated peptidase (SRAP) CF61_RS09745 PF01206 Sulfurtransferase TusA CF61_RS09750 PF04143 Sulphur transport CF61_RS09755 PF13987 YedD-like protein CF61_RS09760 PF00128 Alpha amylase, catalytic domain CF61_RS09760 PF02806 Alpha amylase, C-terminal all-beta domain CF61_RS09765 PF05400 Flagellar protein FliT CF61_RS09770 PF02561 Flagellar protein FliS CF61_RS09775 PF02465 Flagellar hook-associated protein 2 N-terminus CF61_RS09775 PF07195 Flagellar hook-associated protein 2 C-terminus CF61_RS09780 PF00700 Bacterial flagellin C-terminal helical region CF61_RS09780 PF00669 Bacterial flagellin N-terminal helical region CF61_RS09780 PF12445 Flagellin protein CF61_RS09785 PF04539 Sigma-70 region 3 CF61_RS09785 PF04542 Sigma-70 region 2 CF61_RS09785 PF04545 Sigma-70, region 4 CF61_RS09790 PF02899 Phage integrase, N-terminal SAM-like domain CF61_RS09795 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF61_RS09800 PF00291 Pyridoxal-phosphate dependent enzyme CF61_RS09805 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS09810 PF00005 ABC transporter CF61_RS09815 PF00196 Bacterial regulatory proteins, luxR family CF61_RS09815 PF03472 Autoinducer binding domain CF61_RS09820 PF10769 Protein of unknown function (DUF2594) CF61_RS09830 PF00072 Response regulator receiver domain CF61_RS09830 PF00196 Bacterial regulatory proteins, luxR family CF61_RS09835 PF01541 GIY-YIG catalytic domain CF61_RS09835 PF02151 UvrB/uvrC motif CF61_RS09835 PF08459 UvrC Helix-hairpin-helix N-terminal CF61_RS09840 PF01066 CDP-alcohol phosphatidyltransferase CF61_RS09860 PF03695 Uncharacterised protein family (UPF0149) CF61_RS09860 PF02810 SEC-C motif CF61_RS09865 PF03222 Tryptophan/tyrosine permease family CF61_RS09870 PF10678 Protein of unknown function (DUF2492) CF61_RS09875 PF00210 Ferritin-like domain CF61_RS09880 PF13992 YecR-like lipoprotein CF61_RS09890 PF10964 Protein of unknown function (DUF2766) CF61_RS09895 PF00210 Ferritin-like domain CF61_RS09900 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CF61_RS09905 PF00005 ABC transporter CF61_RS09910 PF02653 Branched-chain amino acid transport system / permease component CF61_RS09915 PF02358 Trehalose-phosphatase CF61_RS09920 PF00982 Glycosyltransferase family 20 CF61_RS09925 PF00582 Universal stress protein family CF61_RS09930 PF05247 Flagellar transcriptional activator (FlhD) CF61_RS09935 PF05280 Flagellar transcriptional activator (FlhC) CF61_RS09940 PF01618 MotA/TolQ/ExbB proton channel family CF61_RS09945 PF00691 OmpA family CF61_RS09945 PF13677 Membrane MotB of proton-channel complex MotA/MotB CF61_RS09950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS09950 PF01584 CheW-like domain CF61_RS09950 PF01627 Hpt domain CF61_RS09950 PF02895 Signal transducing histidine kinase, homodimeric domain CF61_RS09950 PF09078 CheY binding CF61_RS09960 PF00672 HAMP domain CF61_RS09960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CF61_RS09960 PF02203 Tar ligand binding domain homologue CF61_RS09970 PF03705 CheR methyltransferase, all-alpha domain CF61_RS09970 PF01739 CheR methyltransferase, SAM binding domain CF61_RS09975 PF01339 CheB methylesterase CF61_RS09975 PF00072 Response regulator receiver domain CF61_RS09980 PF00072 Response regulator receiver domain CF61_RS09985 PF04344 Chemotaxis phosphatase, CheZ CF61_RS09995 PF00771 FHIPEP family CF61_RS10000 PF06366 Flagellar protein FlhE CF61_RS10005 PF07007 Lysozyme inhibitor LprI CF61_RS10010 PF00750 tRNA synthetases class I (R) CF61_RS10010 PF05746 DALR anticodon binding domain CF61_RS10010 PF03485 Arginyl tRNA synthetase N terminal domain CF61_RS10015 PF06185 YecM protein CF61_RS10020 PF03932 CutC family CF61_RS10025 PF03264 NapC/NirT cytochrome c family, N-terminal region CF61_RS10030 PF00384 Molybdopterin oxidoreductase CF61_RS10030 PF18364 Molybdopterin oxidoreductase N-terminal domain CF61_RS10030 PF01568 Molydopterin dinucleotide binding domain CF61_RS10035 PF08003 Protein of unknown function (DUF1698) CF61_RS10040 PF13649 Methyltransferase domain CF61_RS10045 PF01124 MAPEG family CF61_RS10050 PF01904 Protein of unknown function DUF72 CF61_RS10080 PF06440 DNA polymerase III, theta subunit CF61_RS10125 PF00717 Peptidase S24-like CF61_RS10130 PF00857 Isochorismatase family CF61_RS10135 PF01336 OB-fold nucleic acid binding domain CF61_RS10135 PF00152 tRNA synthetases class II (D, K and N) CF61_RS10135 PF02938 GAD domain CF61_RS10140 PF00293 NUDIX domain CF61_RS10145 PF01709 Transcriptional regulator CF61_RS10150 PF02075 Crossover junction endodeoxyribonuclease RuvC CF61_RS10155 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CF61_RS10160 PF01330 RuvA N terminal domain CF61_RS10160 PF07499 RuvA, C-terminal domain CF61_RS10165 PF17864 RuvB AAA lid domain CF61_RS10165 PF05491 RuvB C-terminal winged helix domain CF61_RS10165 PF05496 Holliday junction DNA helicase RuvB P-loop domain CF61_RS10170 PF00950 ABC 3 transport family CF61_RS10175 PF00005 ABC transporter CF61_RS10180 PF01297 Zinc-uptake complex component A periplasmic CF61_RS10185 PF01551 Peptidase family M23 CF61_RS10185 PF01476 LysM domain CF61_RS10185 PF08525 Opacity-associated protein A N-terminal motif CF61_RS10190 PF03279 Bacterial lipid A biosynthesis acyltransferase CF61_RS10195 PF02887 Pyruvate kinase, alpha/beta domain CF61_RS10195 PF00224 Pyruvate kinase, barrel domain CF61_RS10200 PF01418 Helix-turn-helix domain, rpiR family CF61_RS10200 PF01380 SIS domain CF61_RS10210 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CF61_RS10210 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CF61_RS10215 PF00920 Dehydratase family CF61_RS10220 PF01081 KDPG and KHG aldolase CF61_RS10225 PF02222 ATP-grasp domain CF61_RS10230 PF07130 YebG protein CF61_RS10235 PF13995 YebF-like protein CF61_RS10245 PF04391 Protein of unknown function (DUF533) CF61_RS10250 PF00326 Prolyl oligopeptidase family CF61_RS10250 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CF61_RS10255 PF00929 Exonuclease CF61_RS10260 PF00795 Carbon-nitrogen hydrolase CF61_RS10265 PF06440 DNA polymerase III, theta subunit CF61_RS10270 PF04234 CopC domain CF61_RS10275 PF05425 Copper resistance protein D CF61_RS10280 PF10709 Protein of unknown function (DUF2511) CF61_RS10290 PF00149 Calcineurin-like phosphoesterase CF61_RS10295 PF07358 Protein of unknown function (DUF1482) CF61_RS10300 PF07351 Protein of unknown function (DUF1480) CF61_RS10305 PF01189 16S rRNA methyltransferase RsmB/F CF61_RS10305 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CF61_RS10305 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CF61_RS10310 PF02470 MlaD protein CF61_RS10315 PF04403 Paraquat-inducible protein A CF61_RS10320 PF13185 GAF domain CF61_RS10325 PF17516 ProQ C-terminal domain CF61_RS10325 PF04352 ProQ/FINO family CF61_RS10330 PF00595 PDZ domain CF61_RS10330 PF11818 C-terminal domain of tail specific protease (DUF3340) CF61_RS10330 PF03572 Peptidase family S41 CF61_RS10330 PF17804 Tail specific protease N-terminal domain CF61_RS10335 PF01435 Peptidase family M48 CF61_RS10340 PF07690 Major Facilitator Superfamily CF61_RS10345 PF09339 IclR helix-turn-helix domain CF61_RS10345 PF01614 Bacterial transcriptional regulator CF61_RS10350 PF13996 YobH-like protein CF61_RS10355 PF13998 MgrB protein CF61_RS10360 PF13974 YebO-like protein CF61_RS10370 PF10736 Protein of unknown function (DUF2627) CF61_RS10375 PF00313 'Cold-shock' DNA-binding domain CF61_RS10380 PF13847 Methyltransferase domain CF61_RS10385 PF02659 Putative manganese efflux pump CF61_RS10395 PF06173 Protein of unknown function (DUF986) CF61_RS10400 PF03613 PTS system mannose/fructose/sorbose family IID component CF61_RS10405 PF03609 PTS system sorbose-specific iic component CF61_RS10410 PF03610 PTS system fructose IIA component CF61_RS10410 PF03830 PTS system sorbose subfamily IIB component CF61_RS10420 PF03471 Transporter associated domain CF61_RS10420 PF03741 Integral membrane protein TerC family CF61_RS10425 PF00563 EAL domain CF61_RS10425 PF12792 CSS motif domain associated with EAL CF61_RS10430 PF03313 Serine dehydratase alpha chain CF61_RS10430 PF03315 Serine dehydratase beta chain CF61_RS10435 PF00293 NUDIX domain CF61_RS10440 PF00425 chorismate binding enzyme CF61_RS10440 PF04715 Anthranilate synthase component I, N terminal region CF61_RS10445 PF03701 Uncharacterised protein family (UPF0181) CF61_RS10450 PF08986 Domain of unknown function (DUF1889) CF61_RS10460 PF01042 Endoribonuclease L-PSP CF61_RS10465 PF04851 Type III restriction enzyme, res subunit CF61_RS10465 PF13307 Helicase C-terminal domain CF61_RS10470 PF00814 Glycoprotease family CF61_RS10475 PF03843 Outer membrane lipoprotein Slp family CF61_RS10480 PF13193 AMP-binding enzyme C-terminal domain CF61_RS10480 PF00501 AMP-binding enzyme CF61_RS10485 PF01612 3'-5' exonuclease CF61_RS10485 PF00570 HRDC domain CF61_RS10490 PF00970 Oxidoreductase FAD-binding domain CF61_RS10490 PF00175 Oxidoreductase NAD-binding domain CF61_RS10490 PF00111 2Fe-2S iron-sulfur cluster binding domain CF61_RS10495 PF00355 Rieske [2Fe-2S] domain CF61_RS10495 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CF61_RS10500 PF02028 BCCT, betaine/carnitine/choline family transporter CF61_RS10505 PF00180 Isocitrate/isopropylmalate dehydrogenase CF61_RS10510 PF03466 LysR substrate binding domain CF61_RS10510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS10515 PF01810 LysE type translocator CF61_RS10520 PF09313 Domain of unknown function (DUF1971) CF61_RS10525 PF08956 Domain of unknown function (DUF1869) CF61_RS10530 PF04226 Transglycosylase associated protein CF61_RS10540 PF13185 GAF domain CF61_RS10540 PF00990 Diguanylate cyclase, GGDEF domain CF61_RS10545 PF03891 Domain of unknown function (DUF333) CF61_RS10550 PF04343 Protein of unknown function, DUF488 CF61_RS10555 PF07690 Major Facilitator Superfamily CF61_RS10560 PF12833 Helix-turn-helix domain CF61_RS10560 PF02311 AraC-like ligand binding domain CF61_RS10565 PF04284 Protein of unknown function (DUF441) CF61_RS10575 PF04073 Aminoacyl-tRNA editing domain CF61_RS10580 PF00990 Diguanylate cyclase, GGDEF domain CF61_RS10580 PF17155 Gammaproteobacterial periplasmic sensor domain CF61_RS10585 PF00990 Diguanylate cyclase, GGDEF domain CF61_RS10585 PF17158 Membrane-associated sensor, integral membrane domain CF61_RS10590 PF04285 Protein of unknown function (DUF444) CF61_RS10595 PF06798 PrkA serine protein kinase C-terminal domain CF61_RS10595 PF08298 PrkA AAA domain CF61_RS10600 PF06629 MltA-interacting protein MipA CF61_RS10605 PF00248 Aldo/keto reductase family CF61_RS10610 PF01263 Aldose 1-epimerase CF61_RS10615 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CF61_RS10615 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CF61_RS10620 PF01641 SelR domain CF61_RS10625 PF07023 Protein of unknown function (DUF1315) CF61_RS10630 PF08240 Alcohol dehydrogenase GroES-like domain CF61_RS10630 PF00107 Zinc-binding dehydrogenase CF61_RS10635 PF00083 Sugar (and other) transporter CF61_RS10640 PF03400 IS1 transposase CF61_RS10645 PF00248 Aldo/keto reductase family CF61_RS10650 PF00455 DeoR C terminal sensor domain CF61_RS10650 PF08220 DeoR-like helix-turn-helix domain CF61_RS10655 PF00083 Sugar (and other) transporter CF61_RS10660 PF00857 Isochorismatase family CF61_RS10665 PF17763 Glutaminase/Asparaginase C-terminal domain CF61_RS10665 PF00710 Asparaginase, N-terminal CF61_RS10670 PF01343 Peptidase family S49 CF61_RS10680 PF00881 Nitroreductase family CF61_RS10690 PF02769 AIR synthase related protein, C-terminal domain CF61_RS10690 PF00586 AIR synthase related protein, N-terminal domain CF61_RS10695 PF01751 Toprim domain CF61_RS10695 PF01131 DNA topoisomerase CF61_RS10700 PF00012 Hsp70 protein CF61_RS10705 PF00226 DnaJ domain CF61_RS10705 PF01556 DnaJ C terminal domain CF61_RS10705 PF00684 DnaJ central domain CF61_RS10710 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CF61_RS10710 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CF61_RS10715 PF07383 Protein of unknown function (DUF1496) CF61_RS10720 PF00293 NUDIX domain CF61_RS10725 PF01066 CDP-alcohol phosphatidyltransferase CF61_RS10730 PF00581 Rhodanese-like domain CF61_RS10735 PF00005 ABC transporter CF61_RS10740 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS10745 PF13416 Bacterial extracellular solute-binding protein CF61_RS10750 PF02627 Carboxymuconolactone decarboxylase family CF61_RS10755 PF09335 SNARE associated Golgi protein CF61_RS10765 PF09335 SNARE associated Golgi protein CF61_RS10770 PF03372 Endonuclease/Exonuclease/phosphatase family CF61_RS10775 PF00202 Aminotransferase class-III CF61_RS10780 PF04958 Arginine N-succinyltransferase beta subunit CF61_RS10785 PF00171 Aldehyde dehydrogenase family CF61_RS10790 PF04996 Succinylarginine dihydrolase CF61_RS10795 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CF61_RS10800 PF07813 LTXXQ motif family protein CF61_RS10805 PF05962 HutD CF61_RS10820 PF02540 NAD synthase CF61_RS10825 PF04355 SmpA / OmlA family CF61_RS10830 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF61_RS10835 PF02378 Phosphotransferase system, EIIC CF61_RS10840 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CF61_RS10845 PF12833 Helix-turn-helix domain CF61_RS10845 PF07883 Cupin domain CF61_RS10850 PF02056 Family 4 glycosyl hydrolase CF61_RS10850 PF11975 Family 4 glycosyl hydrolase C-terminal domain CF61_RS10855 PF04794 YdjC-like protein CF61_RS10860 PF18011 C-terminal domain found in long catalases CF61_RS10860 PF06628 Catalase-related immune-responsive CF61_RS10860 PF00199 Catalase CF61_RS10865 PF10729 Cell division activator CedA CF61_RS10875 PF12759 InsA C-terminal domain CF61_RS10875 PF03811 InsA N-terminal domain CF61_RS10885 PF00375 Sodium:dicarboxylate symporter family CF61_RS10890 PF04307 LexA-binding, inner membrane-associated putative hydrolase CF61_RS10895 PF13419 Haloacid dehalogenase-like hydrolase CF61_RS10900 PF14002 YniB-like protein CF61_RS10905 PF03881 Fructosamine kinase CF61_RS10910 PF11080 Endoribonuclease GhoS CF61_RS10915 PF00294 pfkB family carbohydrate kinase CF61_RS10920 PF04338 Protein of unknown function, DUF481 CF61_RS10930 PF07906 ShET2 enterotoxin, N-terminal region CF61_RS10935 PF03400 IS1 transposase CF61_RS10945 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CF61_RS10945 PF03129 Anticodon binding domain CF61_RS10945 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CF61_RS10945 PF02824 TGS domain CF61_RS10950 PF00707 Translation initiation factor IF-3, C-terminal domain CF61_RS10950 PF05198 Translation initiation factor IF-3, N-terminal domain CF61_RS10955 PF01632 Ribosomal protein L35 CF61_RS10960 PF00453 Ribosomal protein L20 CF61_RS10970 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CF61_RS10970 PF01409 tRNA synthetases class II core domain (F) CF61_RS10975 PF03483 B3/4 domain CF61_RS10975 PF03484 tRNA synthetase B5 domain CF61_RS10975 PF03147 Ferredoxin-fold anticodon binding domain CF61_RS10975 PF01588 Putative tRNA binding domain CF61_RS10975 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CF61_RS10980 PF00216 Bacterial DNA-binding protein CF61_RS10985 PF01032 FecCD transport family CF61_RS10990 PF00255 Glutathione peroxidase CF61_RS10995 PF00005 ABC transporter CF61_RS11000 PF00877 NlpC/P60 family CF61_RS11005 PF00563 EAL domain CF61_RS11010 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CF61_RS11015 PF10636 Hemin uptake protein hemP CF61_RS11020 PF00793 DAHP synthetase I family CF61_RS11025 PF03618 Kinase/pyrophosphorylase CF61_RS11035 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CF61_RS11035 PF02896 PEP-utilising enzyme, TIM barrel domain CF61_RS11035 PF00391 PEP-utilising enzyme, mobile domain CF61_RS11040 PF13193 AMP-binding enzyme C-terminal domain CF61_RS11040 PF00501 AMP-binding enzyme CF61_RS11050 PF01494 FAD binding domain CF61_RS11055 PF00766 Electron transfer flavoprotein FAD-binding domain CF61_RS11055 PF01012 Electron transfer flavoprotein domain CF61_RS11060 PF01012 Electron transfer flavoprotein domain CF61_RS11070 PF02311 AraC-like ligand binding domain CF61_RS11070 PF12833 Helix-turn-helix domain CF61_RS11075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CF61_RS11075 PF02770 Acyl-CoA dehydrogenase, middle domain CF61_RS11075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CF61_RS11080 PF01144 Coenzyme A transferase CF61_RS11085 PF01487 Type I 3-dehydroquinase CF61_RS11090 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CF61_RS11090 PF08501 Shikimate dehydrogenase substrate binding domain CF61_RS11095 PF07690 Major Facilitator Superfamily CF61_RS11100 PF07690 Major Facilitator Superfamily CF61_RS11105 PF08965 Domain of unknown function (DUF1870) CF61_RS11110 PF01594 AI-2E family transporter CF61_RS11115 PF13183 4Fe-4S dicluster domain CF61_RS11115 PF01565 FAD binding domain CF61_RS11115 PF02913 FAD linked oxidases, C-terminal domain CF61_RS11120 PF03061 Thioesterase superfamily CF61_RS11125 PF15930 Domain of unknown function CF61_RS11130 PF01521 Iron-sulphur cluster biosynthesis CF61_RS11135 PF01458 Uncharacterized protein family (UPF0051) CF61_RS11140 PF00005 ABC transporter CF61_RS11145 PF01458 Uncharacterized protein family (UPF0051) CF61_RS11150 PF00266 Aminotransferase class-V CF61_RS11155 PF02657 Fe-S metabolism associated domain CF61_RS11160 PF03734 L,D-transpeptidase catalytic domain CF61_RS11160 PF01476 LysM domain CF61_RS11160 PF17969 L,D-transpeptidase C-terminal domain CF61_RS11165 PF04728 Lipoprotein leucine-zipper CF61_RS11170 PF02887 Pyruvate kinase, alpha/beta domain CF61_RS11170 PF00224 Pyruvate kinase, barrel domain CF61_RS11175 PF10965 Protein of unknown function (DUF2767) CF61_RS11180 PF12800 4Fe-4S binding domain CF61_RS11180 PF13247 4Fe-4S dicluster domain CF61_RS11185 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 CF61_RS11185 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain CF61_RS11195 PF13247 4Fe-4S dicluster domain CF61_RS11200 PF01292 Prokaryotic cytochrome b561 CF61_RS11210 PF13454 FAD-NAD(P)-binding CF61_RS11215 PF08803 Putative mono-oxygenase ydhR CF61_RS11230 PF03212 Pertactin CF61_RS11230 PF16168 Adhesin of bacterial autotransporter system, probable stalk CF61_RS11235 PF01554 MatE CF61_RS11240 PF00677 Lumazine binding domain CF61_RS11250 PF07690 Major Facilitator Superfamily CF61_RS11255 PF03466 LysR substrate binding domain CF61_RS11255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS11260 PF00356 Bacterial regulatory proteins, lacI family CF61_RS11270 PF07690 Major Facilitator Superfamily CF61_RS11275 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CF61_RS11275 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CF61_RS11280 PF00877 NlpC/P60 family CF61_RS11285 PF00462 Glutaredoxin CF61_RS11290 PF08494 DEAD/H associated CF61_RS11290 PF00270 DEAD/DEAH box helicase CF61_RS11290 PF00271 Helicase conserved C-terminal domain CF61_RS11295 PF00929 Exonuclease CF61_RS11300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CF61_RS11305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CF61_RS11310 PF00440 Bacterial regulatory proteins, tetR family CF61_RS11310 PF16925 Tetracyclin repressor-like, C-terminal domain CF61_RS11315 PF06945 Protein of unknown function (DUF1289) CF61_RS11320 PF00248 Aldo/keto reductase family CF61_RS11325 PF00080 Copper/zinc superoxide dismutase (SODC) CF61_RS11330 PF04632 Fusaric acid resistance protein family CF61_RS11335 PF00529 HlyD membrane-fusion protein of T1SS CF61_RS11335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF61_RS11340 PF07869 Protein of unknown function (DUF1656) CF61_RS11345 PF01047 MarR family CF61_RS11350 PF05433 Glycine zipper 2TM domain CF61_RS11355 PF03702 Anhydro-N-acetylmuramic acid kinase CF61_RS11360 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CF61_RS11365 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CF61_RS11365 PF01243 Pyridoxamine 5'-phosphate oxidase CF61_RS11370 PF01479 S4 domain CF61_RS11370 PF00579 tRNA synthetases class I (W and Y) CF61_RS11375 PF08543 Phosphomethylpyrimidine kinase CF61_RS11380 PF00043 Glutathione S-transferase, C-terminal domain CF61_RS11380 PF02798 Glutathione S-transferase, N-terminal domain CF61_RS11385 PF00854 POT family CF61_RS11395 PF00730 HhH-GPD superfamily base excision DNA repair protein CF61_RS11395 PF00633 Helix-hairpin-helix motif CF61_RS11395 PF10576 Iron-sulfur binding domain of endonuclease III CF61_RS11400 PF02508 Rnf-Nqr subunit, membrane protein CF61_RS11405 PF04205 FMN-binding domain CF61_RS11410 PF03116 NQR2, RnfD, RnfE family CF61_RS11415 PF10531 SLBB domain CF61_RS11415 PF12838 4Fe-4S dicluster domain CF61_RS11415 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CF61_RS11415 PF13375 RnfC Barrel sandwich hybrid domain CF61_RS11420 PF04060 Putative Fe-S cluster CF61_RS11425 PF02508 Rnf-Nqr subunit, membrane protein CF61_RS11430 PF10754 Protein of unknown function (DUF2569) CF61_RS11435 PF05321 Haemolysin expression modulating protein CF61_RS11445 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CF61_RS11445 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CF61_RS11450 PF00962 Adenosine/AMP deaminase CF61_RS11455 PF00155 Aminotransferase class I and II CF61_RS11460 PF02378 Phosphotransferase system, EIIC CF61_RS11460 PF00367 phosphotransferase system, EIIB CF61_RS11465 PF00356 Bacterial regulatory proteins, lacI family CF61_RS11465 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CF61_RS11475 PF00440 Bacterial regulatory proteins, tetR family CF61_RS11480 PF00703 Glycosyl hydrolases family 2 CF61_RS11480 PF02837 Glycosyl hydrolases family 2, sugar binding domain CF61_RS11480 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CF61_RS11490 PF03573 outer membrane porin, OprD family CF61_RS11495 PF03400 IS1 transposase CF61_RS11500 PF03573 outer membrane porin, OprD family CF61_RS11505 PF06097 Bacterial protein of unknown function (DUF945) CF61_RS11510 PF01238 Phosphomannose isomerase type I CF61_RS11515 PF05681 Fumarate hydratase (Fumerase) CF61_RS11515 PF05683 Fumarase C-terminus CF61_RS11520 PF00206 Lyase CF61_RS11520 PF10415 Fumarase C C-terminus CF61_RS11525 PF05472 DNA replication terminus site-binding protein (Ter protein) CF61_RS11530 PF00512 His Kinase A (phospho-acceptor) domain CF61_RS11530 PF00672 HAMP domain CF61_RS11530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS11535 PF00072 Response regulator receiver domain CF61_RS11535 PF00486 Transcriptional regulatory protein, C terminal CF61_RS11540 PF06942 GlpM protein CF61_RS11550 PF13520 Amino acid permease CF61_RS11555 PF07338 Protein of unknown function (DUF1471) CF61_RS11560 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CF61_RS11560 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CF61_RS11560 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CF61_RS11565 PF02233 NAD(P) transhydrogenase beta subunit CF61_RS11570 PF01594 AI-2E family transporter CF61_RS11575 PF00893 Small Multidrug Resistance protein CF61_RS11580 PF00893 Small Multidrug Resistance protein CF61_RS11585 PF00089 Trypsin CF61_RS11600 PF07690 Major Facilitator Superfamily CF61_RS11605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS11605 PF03466 LysR substrate binding domain CF61_RS11610 PF00480 ROK family CF61_RS11620 PF00654 Voltage gated chloride channel CF61_RS11625 PF02613 Nitrate reductase delta subunit CF61_RS11630 PF04976 DMSO reductase anchor subunit (DmsC) CF61_RS11635 PF12800 4Fe-4S binding domain CF61_RS11635 PF13247 4Fe-4S dicluster domain CF61_RS11640 PF01568 Molydopterin dinucleotide binding domain CF61_RS11640 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF61_RS11640 PF00384 Molybdopterin oxidoreductase CF61_RS11645 PF00384 Molybdopterin oxidoreductase CF61_RS11645 PF01568 Molydopterin dinucleotide binding domain CF61_RS11645 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF61_RS11650 PF06649 Protein of unknown function (DUF1161) CF61_RS11655 PF06788 Uncharacterised protein family (UPF0257) CF61_RS11660 PF13302 Acetyltransferase (GNAT) domain CF61_RS11665 PF06932 Protein of unknown function (DUF1283) CF61_RS11670 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CF61_RS11675 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CF61_RS11675 PF13378 Enolase C-terminal domain-like CF61_RS11680 PF08240 Alcohol dehydrogenase GroES-like domain CF61_RS11680 PF00107 Zinc-binding dehydrogenase CF61_RS11685 PF12167 Arm DNA-binding domain CF61_RS11685 PF00589 Phage integrase family CF61_RS11700 PF07358 Protein of unknown function (DUF1482) CF61_RS11705 PF05358 DicB protein CF61_RS11710 PF06147 Protein of unknown function (DUF968) CF61_RS11715 PF03589 Antitermination protein CF61_RS11720 PF00313 'Cold-shock' DNA-binding domain CF61_RS11725 PF00313 'Cold-shock' DNA-binding domain CF61_RS11730 PF04971 Bacteriophage P21 holin S CF61_RS11735 PF07041 Protein of unknown function (DUF1327) CF61_RS11740 PF00959 Phage lysozyme CF61_RS11745 PF10721 Protein of unknown function (DUF2514) CF61_RS11750 PF00313 'Cold-shock' DNA-binding domain CF61_RS11760 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system CF61_RS11770 PF13132 Domain of unknown function (DUF3950) CF61_RS11785 PF07471 Phage DNA packaging protein Nu1 CF61_RS11790 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CF61_RS11795 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CF61_RS11800 PF02796 Helix-turn-helix domain of resolvase CF61_RS11800 PF00239 Resolvase, N terminal domain CF61_RS11810 PF07690 Major Facilitator Superfamily CF61_RS11810 PF00083 Sugar (and other) transporter CF61_RS11815 PF08125 Mannitol dehydrogenase C-terminal domain CF61_RS11815 PF01232 Mannitol dehydrogenase Rossmann domain CF61_RS11820 PF14001 YdfZ protein CF61_RS11825 PF00392 Bacterial regulatory proteins, gntR family CF61_RS11825 PF07729 FCD domain CF61_RS11830 PF00106 short chain dehydrogenase CF61_RS11835 PF01432 Peptidase family M3 CF61_RS11840 PF02464 Competence-damaged protein CF61_RS11845 PF04076 Bacterial OB fold (BOF) protein CF61_RS11850 PF00990 Diguanylate cyclase, GGDEF domain CF61_RS11860 PF07690 Major Facilitator Superfamily CF61_RS11865 PF00892 EamA-like transporter family CF61_RS11870 PF13999 MarB protein CF61_RS11875 PF12833 Helix-turn-helix domain CF61_RS11880 PF01047 MarR family CF61_RS11885 PF01914 MarC family integral membrane protein CF61_RS11890 PF07690 Major Facilitator Superfamily CF61_RS11900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS11900 PF03466 LysR substrate binding domain CF61_RS11905 PF00171 Aldehyde dehydrogenase family CF61_RS11910 PF04960 Glutaminase CF61_RS11915 PF13811 Domain of unknown function (DUF4186) CF61_RS11920 PF00990 Diguanylate cyclase, GGDEF domain CF61_RS11925 PF08125 Mannitol dehydrogenase C-terminal domain CF61_RS11925 PF01232 Mannitol dehydrogenase Rossmann domain CF61_RS11930 PF01062 Bestrophin, RFP-TM, chloride channel CF61_RS11935 PF13649 Methyltransferase domain CF61_RS11940 PF03992 Antibiotic biosynthesis monooxygenase CF61_RS11945 PF01791 DeoC/LacD family aldolase CF61_RS11950 PF13407 Periplasmic binding protein domain CF61_RS11955 PF02653 Branched-chain amino acid transport system / permease component CF61_RS11960 PF02653 Branched-chain amino acid transport system / permease component CF61_RS11965 PF00005 ABC transporter CF61_RS11970 PF04198 Putative sugar-binding domain CF61_RS11975 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CF61_RS11975 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CF61_RS11980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CF61_RS11980 PF08447 PAS fold CF61_RS11985 PF00239 Resolvase, N terminal domain CF61_RS11985 PF02796 Helix-turn-helix domain of resolvase CF61_RS11990 PF13700 Domain of unknown function (DUF4158) CF61_RS11990 PF01526 Tn3 transposase DDE domain CF61_RS12000 PF02909 Tetracyclin repressor-like, C-terminal domain CF61_RS12000 PF00440 Bacterial regulatory proteins, tetR family CF61_RS12010 PF00892 EamA-like transporter family CF61_RS12020 PF13700 Domain of unknown function (DUF4158) CF61_RS12020 PF01526 Tn3 transposase DDE domain CF61_RS12025 PF13018 Extended Signal Peptide of Type V secretion system CF61_RS12030 PF01381 Helix-turn-helix CF61_RS12035 PF07804 HipA-like C-terminal domain CF61_RS12035 PF13657 HipA N-terminal domain CF61_RS12045 PF13953 PapC C-terminal domain CF61_RS12045 PF00577 Outer membrane usher protein CF61_RS12050 PF00419 Fimbrial protein CF61_RS12055 PF00419 Fimbrial protein CF61_RS12060 PF09160 FimH, mannose binding CF61_RS12065 PF00384 Molybdopterin oxidoreductase CF61_RS12070 PF17073 Two-component-system connector protein CF61_RS12075 PF12833 Helix-turn-helix domain CF61_RS12085 PF13186 Iron-sulfur cluster-binding domain CF61_RS12085 PF04055 Radical SAM superfamily CF61_RS12090 PF00005 ABC transporter CF61_RS12090 PF06472 ABC transporter transmembrane region 2 CF61_RS12095 PF07715 TonB-dependent Receptor Plug Domain CF61_RS12100 PF05193 Peptidase M16 inactive domain CF61_RS12100 PF00675 Insulinase (Peptidase family M16) CF61_RS12110 PF00282 Pyridoxal-dependent decarboxylase conserved domain CF61_RS12115 PF13520 Amino acid permease CF61_RS12120 PF02638 Glycosyl hydrolase-like 10 CF61_RS12125 PF00990 Diguanylate cyclase, GGDEF domain CF61_RS12130 PF00990 Diguanylate cyclase, GGDEF domain CF61_RS12130 PF13426 PAS domain CF61_RS12130 PF00563 EAL domain CF61_RS12135 PF01427 D-ala-D-ala dipeptidase CF61_RS12140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF61_RS12145 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS12150 PF12911 N-terminal TM domain of oligopeptide transport permease C CF61_RS12150 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS12155 PF00005 ABC transporter CF61_RS12155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF61_RS12160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF61_RS12160 PF00005 ABC transporter CF61_RS12165 PF02566 OsmC-like protein CF61_RS12170 PF10684 Putative biofilm-dependent modulation protein CF61_RS12175 PF08136 30S ribosomal protein subunit S22 family CF61_RS12180 PF03949 Malic enzyme, NAD binding domain CF61_RS12180 PF00390 Malic enzyme, N-terminal domain CF61_RS12185 PF08240 Alcohol dehydrogenase GroES-like domain CF61_RS12185 PF00107 Zinc-binding dehydrogenase CF61_RS12190 PF01381 Helix-turn-helix CF61_RS12195 PF01292 Prokaryotic cytochrome b561 CF61_RS12200 PF13247 4Fe-4S dicluster domain CF61_RS12200 PF12800 4Fe-4S binding domain CF61_RS12200 PF09163 Formate dehydrogenase N, transmembrane CF61_RS12205 PF01568 Molydopterin dinucleotide binding domain CF61_RS12205 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF61_RS12205 PF00384 Molybdopterin oxidoreductase CF61_RS12210 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF61_RS12210 PF01568 Molydopterin dinucleotide binding domain CF61_RS12210 PF00384 Molybdopterin oxidoreductase CF61_RS12215 PF00892 EamA-like transporter family CF61_RS12220 PF00267 Gram-negative porin CF61_RS12225 PF03400 IS1 transposase CF61_RS12230 PF07690 Major Facilitator Superfamily CF61_RS12235 PF14710 Respiratory nitrate reductase alpha N-terminal CF61_RS12235 PF01568 Molydopterin dinucleotide binding domain CF61_RS12235 PF00384 Molybdopterin oxidoreductase CF61_RS12240 PF13247 4Fe-4S dicluster domain CF61_RS12240 PF14711 Respiratory nitrate reductase beta C-terminal CF61_RS12245 PF02613 Nitrate reductase delta subunit CF61_RS12250 PF02665 Nitrate reductase gamma subunit CF61_RS12255 PF02567 Phenazine biosynthesis-like protein CF61_RS12260 PF00797 N-acetyltransferase CF61_RS12265 PF01613 Flavin reductase like domain CF61_RS12270 PF01361 Tautomerase enzyme CF61_RS12275 PF13808 DDE_Tnp_1-associated CF61_RS12275 PF01609 Transposase DDE domain CF61_RS12280 PF01609 Transposase DDE domain CF61_RS12280 PF13808 DDE_Tnp_1-associated CF61_RS12285 PF03400 IS1 transposase CF61_RS12305 PF17520 Family of unknown function (DUF5445) CF61_RS12310 PF13417 Glutathione S-transferase, N-terminal domain CF61_RS12315 PF00324 Amino acid permease CF61_RS12325 PF07715 TonB-dependent Receptor Plug Domain CF61_RS12325 PF00593 TonB dependent receptor CF61_RS12330 PF07729 FCD domain CF61_RS12330 PF00392 Bacterial regulatory proteins, gntR family CF61_RS12335 PF16884 N-terminal domain of oxidoreductase CF61_RS12335 PF00107 Zinc-binding dehydrogenase CF61_RS12340 PF00583 Acetyltransferase (GNAT) family CF61_RS12345 PF04657 Putative inner membrane exporter, YdcZ CF61_RS12350 PF10735 Protein of unknown function (DUF2526) CF61_RS12355 PF10753 Toxin GhoT_OrtT CF61_RS12365 PF00171 Aldehyde dehydrogenase family CF61_RS12370 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS12375 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS12380 PF08402 TOBE domain CF61_RS12380 PF00005 ABC transporter CF61_RS12385 PF13416 Bacterial extracellular solute-binding protein CF61_RS12390 PF00392 Bacterial regulatory proteins, gntR family CF61_RS12390 PF00155 Aminotransferase class I and II CF61_RS12395 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system CF61_RS12395 PF01381 Helix-turn-helix CF61_RS12405 PF10829 Protein of unknown function (DUF2554) CF61_RS12415 PF01381 Helix-turn-helix CF61_RS12415 PF07883 Cupin domain CF61_RS12420 PF03594 Benzoate membrane transport protein CF61_RS12425 PF12323 Helix-turn-helix domain CF61_RS12425 PF01385 Probable transposase CF61_RS12425 PF07282 Putative transposase DNA-binding domain CF61_RS12430 PF01797 Transposase IS200 like CF61_RS12440 PF11769 Protein of unknown function (DUF3313) CF61_RS12445 PF03848 Tellurite resistance protein TehB CF61_RS12450 PF03595 Voltage-dependent anion channel CF61_RS12455 PF18836 Beta solenoid repeat from YDCK CF61_RS12460 PF13302 Acetyltransferase (GNAT) domain CF61_RS12465 PF04325 Protein of unknown function (DUF465) CF61_RS12475 PF04349 Periplasmic glucan biosynthesis protein, MdoG CF61_RS12480 PF07063 Domain of unknown function (DUF1338) CF61_RS12485 PF03466 LysR substrate binding domain CF61_RS12485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS12490 PF00672 HAMP domain CF61_RS12490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CF61_RS12490 PF02203 Tar ligand binding domain homologue CF61_RS12500 PF00665 Integrase core domain CF61_RS12500 PF13276 HTH-like domain CF61_RS12500 PF13333 Integrase core domain CF61_RS12505 PF01848 Hok/gef family CF61_RS12515 PF01292 Prokaryotic cytochrome b561 CF61_RS12520 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CF61_RS12520 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CF61_RS12525 PF00171 Aldehyde dehydrogenase family CF61_RS12530 PF02698 DUF218 domain CF61_RS12535 PF11898 Domain of unknown function (DUF3418) CF61_RS12535 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CF61_RS12535 PF04408 Helicase associated domain (HA2) CF61_RS12535 PF00270 DEAD/DEAH box helicase CF61_RS12535 PF00271 Helicase conserved C-terminal domain CF61_RS12540 PF02525 Flavodoxin-like fold CF61_RS12545 PF00782 Dual specificity phosphatase, catalytic domain CF61_RS12550 PF12146 Serine aminopeptidase, S33 CF61_RS12550 PF12147 Putative methyltransferase CF61_RS12560 PF01066 CDP-alcohol phosphatidyltransferase CF61_RS12580 PF00132 Bacterial transferase hexapeptide (six repeats) CF61_RS12585 PF07848 PaaX-like protein CF61_RS12585 PF08223 PaaX-like protein C-terminal domain CF61_RS12590 PF00501 AMP-binding enzyme CF61_RS12590 PF14535 AMP-binding enzyme C-terminal domain CF61_RS12595 PF00108 Thiolase, N-terminal domain CF61_RS12595 PF02803 Thiolase, C-terminal domain CF61_RS12600 PF03061 Thioesterase superfamily CF61_RS12605 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CF61_RS12605 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CF61_RS12605 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CF61_RS12610 PF00378 Enoyl-CoA hydratase/isomerase CF61_RS12615 PF00378 Enoyl-CoA hydratase/isomerase CF61_RS12620 PF00970 Oxidoreductase FAD-binding domain CF61_RS12620 PF00111 2Fe-2S iron-sulfur cluster binding domain CF61_RS12620 PF00175 Oxidoreductase NAD-binding domain CF61_RS12625 PF01883 Iron-sulfur cluster assembly protein CF61_RS12630 PF05138 Phenylacetic acid catabolic protein CF61_RS12635 PF06243 Phenylacetic acid degradation B CF61_RS12640 PF05138 Phenylacetic acid catabolic protein CF61_RS12645 PF00171 Aldehyde dehydrogenase family CF61_RS12645 PF01575 MaoC like domain CF61_RS12650 PF01179 Copper amine oxidase, enzyme domain CF61_RS12650 PF02727 Copper amine oxidase, N2 domain CF61_RS12650 PF02728 Copper amine oxidase, N3 domain CF61_RS12650 PF07833 Copper amine oxidase N-terminal domain CF61_RS12655 PF00171 Aldehyde dehydrogenase family CF61_RS12660 PF14525 AraC-binding-like domain CF61_RS12660 PF12833 Helix-turn-helix domain CF61_RS12665 PF07027 Protein of unknown function (DUF1318) CF61_RS12670 PF13617 YnbE-like lipoprotein CF61_RS12675 PF11739 Dicarboxylate transport CF61_RS12680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CF61_RS12680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CF61_RS12685 PF03724 META domain CF61_RS12690 PF03891 Domain of unknown function (DUF333) CF61_RS12695 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CF61_RS12695 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CF61_RS12695 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CF61_RS12695 PF10371 Domain of unknown function CF61_RS12695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CF61_RS12700 PF00267 Gram-negative porin CF61_RS12705 PF00582 Universal stress protein family CF61_RS12710 PF01171 PP-loop family CF61_RS12715 PF00271 Helicase conserved C-terminal domain CF61_RS12715 PF00270 DEAD/DEAH box helicase CF61_RS12715 PF03880 DbpA RNA binding domain CF61_RS12725 PF01544 CorA-like Mg2+ transporter protein CF61_RS12730 PF00990 Diguanylate cyclase, GGDEF domain CF61_RS12730 PF08448 PAS fold CF61_RS12735 PF01713 Smr domain CF61_RS12745 PF03466 LysR substrate binding domain CF61_RS12745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS12750 PF07687 Peptidase dimerisation domain CF61_RS12750 PF01546 Peptidase family M20/M25/M40 CF61_RS12755 PF01546 Peptidase family M20/M25/M40 CF61_RS12765 PF03806 AbgT putative transporter family CF61_RS12770 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CF61_RS12770 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CF61_RS12775 PF00027 Cyclic nucleotide-binding domain CF61_RS12775 PF00325 Bacterial regulatory proteins, crp family CF61_RS12780 PF00582 Universal stress protein family CF61_RS12785 PF10749 Protein of unknown function (DUF2534) CF61_RS12790 PF00924 Mechanosensitive ion channel CF61_RS12795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF61_RS12805 PF03466 LysR substrate binding domain CF61_RS12805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS12810 PF12146 Serine aminopeptidase, S33 CF61_RS12820 PF00246 Zinc carboxypeptidase CF61_RS12825 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CF61_RS12825 PF13378 Enolase C-terminal domain-like CF61_RS12830 PF08534 Redoxin CF61_RS12835 PF13188 PAS domain CF61_RS12835 PF00158 Sigma-54 interaction domain CF61_RS12835 PF18024 Helix-turn-helix domain CF61_RS12840 PF05128 Domain of unknown function (DUF697) CF61_RS12845 PF04317 YcjX-like family, DUF463 CF61_RS12850 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CF61_RS12850 PF00356 Bacterial regulatory proteins, lacI family CF61_RS12855 PF09381 Outer membrane protein G (OmpG) CF61_RS12860 PF03459 TOBE domain CF61_RS12860 PF00005 ABC transporter CF61_RS12860 PF17912 MalK OB fold domain CF61_RS12865 PF13419 Haloacid dehalogenase-like hydrolase CF61_RS12870 PF03636 Glycosyl hydrolase family 65, N-terminal domain CF61_RS12870 PF03632 Glycosyl hydrolase family 65 central catalytic domain CF61_RS12870 PF03633 Glycosyl hydrolase family 65, C-terminal domain CF61_RS12875 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CF61_RS12875 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CF61_RS12885 PF00107 Zinc-binding dehydrogenase CF61_RS12890 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS12895 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS12900 PF01547 Bacterial extracellular solute-binding protein CF61_RS12905 PF00128 Alpha amylase, catalytic domain CF61_RS12910 PF00581 Rhodanese-like domain CF61_RS12915 PF09584 Phage shock protein PspD (Phageshock_PspD) CF61_RS12920 PF04024 PspC domain CF61_RS12925 PF06667 Phage shock protein B CF61_RS12930 PF04012 PspA/IM30 family CF61_RS12935 PF02954 Bacterial regulatory protein, Fis family CF61_RS12935 PF00158 Sigma-54 interaction domain CF61_RS12940 PF00202 Aminotransferase class-III CF61_RS12945 PF01266 FAD dependent oxidoreductase CF61_RS12950 PF00171 Aldehyde dehydrogenase family CF61_RS12955 PF01381 Helix-turn-helix CF61_RS12955 PF07883 Cupin domain CF61_RS12960 PF07722 Peptidase C26 CF61_RS12965 PF00120 Glutamine synthetase, catalytic domain CF61_RS12970 PF00324 Amino acid permease CF61_RS12975 PF10820 Protein of unknown function (DUF2543) CF61_RS12985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF61_RS12990 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS12995 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS12995 PF12911 N-terminal TM domain of oligopeptide transport permease C CF61_RS13000 PF00005 ABC transporter CF61_RS13000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF61_RS13005 PF00005 ABC transporter CF61_RS13010 PF04480 Protein of unknown function (DUF559) CF61_RS13030 PF08206 Ribonuclease B OB domain CF61_RS13030 PF00575 S1 RNA binding domain CF61_RS13030 PF17876 Cold shock domain CF61_RS13030 PF00773 RNB domain CF61_RS13040 PF00563 EAL domain CF61_RS13040 PF00990 Diguanylate cyclase, GGDEF domain CF61_RS13040 PF13426 PAS domain CF61_RS13050 PF00455 DeoR C terminal sensor domain CF61_RS13050 PF08220 DeoR-like helix-turn-helix domain CF61_RS13055 PF05433 Glycine zipper 2TM domain CF61_RS13060 PF01253 Translation initiation factor SUI1 CF61_RS13065 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CF61_RS13070 PF18073 Rubredoxin metal binding domain CF61_RS13075 PF06305 Lipopolysaccharide assembly protein A domain CF61_RS13080 PF01569 PAP2 superfamily CF61_RS13085 PF00925 GTP cyclohydrolase II CF61_RS13090 PF00694 Aconitase C-terminal domain CF61_RS13090 PF00330 Aconitase family (aconitate hydratase) CF61_RS13105 PF03400 IS1 transposase CF61_RS13110 PF01544 CorA-like Mg2+ transporter protein CF61_RS13120 PF09992 Phosphodiester glycosidase CF61_RS13125 PF12759 InsA C-terminal domain CF61_RS13125 PF03811 InsA N-terminal domain CF61_RS13130 PF03400 IS1 transposase CF61_RS13145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS13145 PF03466 LysR substrate binding domain CF61_RS13150 PF08272 Topoisomerase I zinc-ribbon-like CF61_RS13150 PF01396 Topoisomerase DNA binding C4 zinc finger CF61_RS13150 PF01751 Toprim domain CF61_RS13150 PF01131 DNA topoisomerase CF61_RS13160 PF10692 Protein of unknown function (DUF2498) CF61_RS13165 PF08496 Peptidase family S49 N-terminal CF61_RS13165 PF01343 Peptidase family S49 CF61_RS13175 PF00106 short chain dehydrogenase CF61_RS13180 PF12557 Cob(I)alamin adenosyltransferase N terminal CF61_RS13180 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CF61_RS13185 PF01479 S4 domain CF61_RS13185 PF00849 RNA pseudouridylate synthase CF61_RS13195 PF01300 Telomere recombination CF61_RS13200 PF02811 PHP domain CF61_RS13205 PF04715 Anthranilate synthase component I, N terminal region CF61_RS13205 PF00425 chorismate binding enzyme CF61_RS13210 PF00591 Glycosyl transferase family, a/b domain CF61_RS13210 PF02885 Glycosyl transferase family, helical bundle domain CF61_RS13210 PF00117 Glutamine amidotransferase class-I CF61_RS13215 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CF61_RS13215 PF00218 Indole-3-glycerol phosphate synthase CF61_RS13220 PF00291 Pyridoxal-phosphate dependent enzyme CF61_RS13225 PF00290 Tryptophan synthase alpha chain CF61_RS13230 PF10685 Stress-induced bacterial acidophilic repeat motif CF61_RS13235 PF05974 Domain of unknown function (DUF892) CF61_RS13240 PF05974 Domain of unknown function (DUF892) CF61_RS13245 PF03922 OmpW family CF61_RS13255 PF04279 Intracellular septation protein A CF61_RS13260 PF03061 Thioesterase superfamily CF61_RS13265 PF03544 Gram-negative bacterial TonB protein C-terminal CF61_RS13270 PF03795 YCII-related domain CF61_RS13275 PF02254 TrkA-N domain CF61_RS13275 PF07885 Ion channel CF61_RS13285 PF13396 Phospholipase_D-nuclease N-terminal CF61_RS13285 PF13091 PLD-like domain CF61_RS13290 PF04269 Protein of unknown function, DUF440 CF61_RS13295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF61_RS13295 PF00005 ABC transporter CF61_RS13300 PF00005 ABC transporter CF61_RS13300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF61_RS13305 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS13305 PF12911 N-terminal TM domain of oligopeptide transport permease C CF61_RS13310 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS13315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF61_RS13320 PF01914 MarC family integral membrane protein CF61_RS13325 PF00465 Iron-containing alcohol dehydrogenase CF61_RS13325 PF00171 Aldehyde dehydrogenase family CF61_RS13330 PF00265 Thymidine kinase CF61_RS13335 PF00816 H-NS histone family CF61_RS13340 PF00483 Nucleotidyl transferase CF61_RS13345 PF00072 Response regulator receiver domain CF61_RS13350 PF01734 Patatin-like phospholipase CF61_RS13355 PF02810 SEC-C motif CF61_RS13360 PF00551 Formyl transferase CF61_RS13360 PF01842 ACT domain CF61_RS13380 PF02665 Nitrate reductase gamma subunit CF61_RS13385 PF02613 Nitrate reductase delta subunit CF61_RS13390 PF14711 Respiratory nitrate reductase beta C-terminal CF61_RS13390 PF13247 4Fe-4S dicluster domain CF61_RS13395 PF14710 Respiratory nitrate reductase alpha N-terminal CF61_RS13395 PF01568 Molydopterin dinucleotide binding domain CF61_RS13395 PF00384 Molybdopterin oxidoreductase CF61_RS13400 PF07690 Major Facilitator Superfamily CF61_RS13410 PF00672 HAMP domain CF61_RS13410 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CF61_RS13410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS13410 PF07730 Histidine kinase CF61_RS13415 PF00196 Bacterial regulatory proteins, luxR family CF61_RS13415 PF00072 Response regulator receiver domain CF61_RS13420 PF11924 Inverse autotransporter, beta-domain CF61_RS13425 PF02635 DsrE/DsrF-like family CF61_RS13430 PF04752 ChaC-like protein CF61_RS13435 PF06150 ChaB CF61_RS13440 PF01699 Sodium/calcium exchanger protein CF61_RS13445 PF13940 Toxin Ldr, type I toxin-antitoxin system CF61_RS13450 PF13940 Toxin Ldr, type I toxin-antitoxin system CF61_RS13460 PF13333 Integrase core domain CF61_RS13460 PF13276 HTH-like domain CF61_RS13460 PF00665 Integrase core domain CF61_RS13465 PF13940 Toxin Ldr, type I toxin-antitoxin system CF61_RS13470 PF00793 DAHP synthetase I family CF61_RS13475 PF13369 Transglutaminase-like superfamily CF61_RS13480 PF04247 Invasion gene expression up-regulator, SirB CF61_RS13485 PF17827 PrmC N-terminal domain CF61_RS13485 PF13847 Methyltransferase domain CF61_RS13490 PF00472 RF-1 domain CF61_RS13490 PF03462 PCRF domain CF61_RS13495 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CF61_RS13495 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CF61_RS13495 PF01488 Shikimate / quinate 5-dehydrogenase CF61_RS13500 PF03550 Outer membrane lipoprotein LolB CF61_RS13505 PF00288 GHMP kinases N terminal domain CF61_RS13505 PF08544 GHMP kinases C terminal CF61_RS13510 PF14572 Phosphoribosyl synthetase-associated domain CF61_RS13510 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CF61_RS13515 PF00916 Sulfate permease family CF61_RS13515 PF01740 STAS domain CF61_RS13520 PF10762 Protein of unknown function (DUF2583) CF61_RS13525 PF01195 Peptidyl-tRNA hydrolase CF61_RS13530 PF06071 Protein of unknown function (DUF933) CF61_RS13530 PF01926 50S ribosome-binding GTPase CF61_RS13540 PF03212 Pertactin CF61_RS13540 PF03797 Autotransporter beta-domain CF61_RS13545 PF02954 Bacterial regulatory protein, Fis family CF61_RS13545 PF00989 PAS fold CF61_RS13545 PF00158 Sigma-54 interaction domain CF61_RS13550 PF02733 Dak1 domain CF61_RS13555 PF02734 DAK2 domain CF61_RS13560 PF00381 PTS HPr component phosphorylation site CF61_RS13560 PF00391 PEP-utilising enzyme, mobile domain CF61_RS13560 PF03610 PTS system fructose IIA component CF61_RS13560 PF05524 PEP-utilising enzyme, N-terminal CF61_RS13565 PF01204 Trehalase CF61_RS13575 PF04226 Transglycosylase associated protein CF61_RS13580 PF07238 PilZ domain CF61_RS13580 PF07317 Flagellar regulator YcgR CF61_RS13585 PF01464 Transglycosylase SLT domain CF61_RS13590 PF17676 LD-carboxypeptidase C-terminal domain CF61_RS13590 PF02016 LD-carboxypeptidase N-terminal domain CF61_RS13595 PF00999 Sodium/hydrogen exchanger family CF61_RS13595 PF02080 TrkA-C domain CF61_RS13595 PF03471 Transporter associated domain CF61_RS13600 PF00842 Alanine racemase, C-terminal domain CF61_RS13600 PF01168 Alanine racemase, N-terminal domain CF61_RS13605 PF01266 FAD dependent oxidoreductase CF61_RS13610 PF04293 SpoVR like protein CF61_RS13615 PF07840 FadR C-terminal domain CF61_RS13615 PF00392 Bacterial regulatory proteins, gntR family CF61_RS13620 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CF61_RS13625 PF02600 Disulfide bond formation protein DsbB CF61_RS13630 PF00817 impB/mucB/samB family CF61_RS13630 PF11799 impB/mucB/samB family C-terminal domain CF61_RS13630 PF13438 Domain of unknown function (DUF4113) CF61_RS13630 PF11798 IMS family HHH motif CF61_RS13635 PF00717 Peptidase S24-like CF61_RS13640 PF06109 Haemolysin E (HlyE) CF61_RS13645 PF03692 Putative zinc- or iron-chelating domain CF61_RS13650 PF01557 Fumarylacetoacetate (FAA) hydrolase family CF61_RS13655 PF05166 YcgL domain CF61_RS13665 PF04151 Bacterial pre-peptidase C-terminal domain CF61_RS13670 PF05666 Fels-1 Prophage Protein-like CF61_RS13675 PF05209 Septum formation inhibitor MinC, N-terminal domain CF61_RS13675 PF03775 Septum formation inhibitor MinC, C-terminal domain CF61_RS13680 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CF61_RS13685 PF03776 Septum formation topological specificity factor MinE CF61_RS13690 PF03797 Autotransporter beta-domain CF61_RS13700 PF13436 Glycine-zipper domain CF61_RS13705 PF16456 YmgD protein CF61_RS13720 PF03400 IS1 transposase CF61_RS13735 PF00563 EAL domain CF61_RS13735 PF12792 CSS motif domain associated with EAL CF61_RS13745 PF10798 Biofilm development protein YmgB/AriR CF61_RS13755 PF10798 Biofilm development protein YmgB/AriR CF61_RS13760 PF00563 EAL domain CF61_RS13760 PF04940 Sensors of blue-light using FAD CF61_RS13765 PF13411 MerR HTH family regulatory protein CF61_RS13770 PF07166 Protein of unknown function (DUF1398) CF61_RS13785 PF00180 Isocitrate/isopropylmalate dehydrogenase CF61_RS13790 PF00849 RNA pseudouridylate synthase CF61_RS13795 PF00293 NUDIX domain CF61_RS13805 PF04356 Protein of unknown function (DUF489) CF61_RS13810 PF08328 Adenylosuccinate lyase C-terminal CF61_RS13810 PF00206 Lyase CF61_RS13815 PF00072 Response regulator receiver domain CF61_RS13815 PF00486 Transcriptional regulatory protein, C terminal CF61_RS13820 PF08918 PhoQ Sensor CF61_RS13820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS13825 PF08007 Cupin superfamily protein CF61_RS13830 PF01546 Peptidase family M20/M25/M40 CF61_RS13830 PF07687 Peptidase dimerisation domain CF61_RS13840 PF08402 TOBE domain CF61_RS13840 PF00005 ABC transporter CF61_RS13845 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS13850 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS13855 PF13416 Bacterial extracellular solute-binding protein CF61_RS13860 PF12158 Protein of unknown function (DUF3592) CF61_RS13865 PF04536 TPM domain CF61_RS13870 PF02146 Sir2 family CF61_RS13875 PF00480 ROK family CF61_RS13880 PF02687 FtsX-like permease family CF61_RS13880 PF12704 MacB-like periplasmic core domain CF61_RS13885 PF00005 ABC transporter CF61_RS13890 PF12704 MacB-like periplasmic core domain CF61_RS13890 PF02687 FtsX-like permease family CF61_RS13900 PF02559 CarD-like/TRCF domain CF61_RS13900 PF00271 Helicase conserved C-terminal domain CF61_RS13900 PF03461 TRCF domain CF61_RS13900 PF17757 UvrB interaction domain CF61_RS13900 PF00270 DEAD/DEAH box helicase CF61_RS13905 PF17969 L,D-transpeptidase C-terminal domain CF61_RS13905 PF01476 LysM domain CF61_RS13905 PF03734 L,D-transpeptidase catalytic domain CF61_RS13910 PF07338 Protein of unknown function (DUF1471) CF61_RS13915 PF00440 Bacterial regulatory proteins, tetR family CF61_RS13920 PF05433 Glycine zipper 2TM domain CF61_RS13925 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF61_RS13930 PF05728 Uncharacterised protein family (UPF0227) CF61_RS13935 PF00933 Glycosyl hydrolase family 3 N terminal domain CF61_RS13940 PF01636 Phosphotransferase enzyme family CF61_RS13945 PF13036 Peptidoglycan-synthase activator LpoB CF61_RS13950 PF07233 Protein of unknown function (DUF1425) CF61_RS13955 PF01230 HIT domain CF61_RS13960 PF07715 TonB-dependent Receptor Plug Domain CF61_RS13960 PF00593 TonB dependent receptor CF61_RS13965 PF00367 phosphotransferase system, EIIB CF61_RS13965 PF02378 Phosphotransferase system, EIIC CF61_RS13970 PF01026 TatD related DNase CF61_RS13975 PF09115 DNA polymerase III, delta subunit, C terminal CF61_RS13980 PF02223 Thymidylate kinase CF61_RS13985 PF02618 YceG-like family CF61_RS13990 PF01063 Amino-transferase class IV CF61_RS13995 PF02801 Beta-ketoacyl synthase, C-terminal domain CF61_RS13995 PF00109 Beta-ketoacyl synthase, N-terminal domain CF61_RS14000 PF00550 Phosphopantetheine attachment site CF61_RS14010 PF00698 Acyl transferase domain CF61_RS14015 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CF61_RS14015 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CF61_RS14020 PF02504 Fatty acid synthesis protein CF61_RS14025 PF01783 Ribosomal L32p protein family CF61_RS14030 PF02620 Large ribosomal RNA subunit accumulation protein YceD CF61_RS14035 PF02545 Maf-like protein CF61_RS14040 PF01479 S4 domain CF61_RS14040 PF00849 RNA pseudouridylate synthase CF61_RS14050 PF12111 Polyribonucleotide phosphorylase C terminal CF61_RS14050 PF00575 S1 RNA binding domain CF61_RS14050 PF10150 Ribonuclease E/G family CF61_RS14055 PF00669 Bacterial flagellin N-terminal helical region CF61_RS14060 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CF61_RS14060 PF00460 Flagella basal body rod protein CF61_RS14065 PF10135 Rod binding protein CF61_RS14065 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CF61_RS14070 PF02119 Flagellar P-ring protein CF61_RS14075 PF02107 Flagellar L-ring protein CF61_RS14080 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CF61_RS14080 PF00460 Flagella basal body rod protein CF61_RS14085 PF00460 Flagella basal body rod protein CF61_RS14085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CF61_RS14090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CF61_RS14090 PF07559 Flagellar basal body protein FlaE CF61_RS14090 PF00460 Flagella basal body rod protein CF61_RS14095 PF13861 FlgD Tudor-like domain CF61_RS14095 PF13860 FlgD Ig-like domain CF61_RS14095 PF03963 Flagellar hook capping protein - N-terminal region CF61_RS14100 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CF61_RS14100 PF00460 Flagella basal body rod protein CF61_RS14105 PF00460 Flagella basal body rod protein CF61_RS14110 PF13144 Chaperone for flagella basal body P-ring formation CF61_RS14115 PF04316 Anti-sigma-28 factor, FlgM CF61_RS14120 PF05130 FlgN protein CF61_RS14125 PF03023 Lipid II flippase MurJ CF61_RS14130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CF61_RS14135 PF04337 Protein of unknown function, DUF480 CF61_RS14140 PF13302 Acetyltransferase (GNAT) domain CF61_RS14145 PF07690 Major Facilitator Superfamily CF61_RS14150 PF13417 Glutathione S-transferase, N-terminal domain CF61_RS14150 PF04399 Glutaredoxin 2, C terminal domain CF61_RS14155 PF07273 Protein of unknown function (DUF1439) CF61_RS14160 PF01979 Amidohydrolase family CF61_RS14165 PF06183 DinI-like family CF61_RS14170 PF13991 BssS protein family CF61_RS14175 PF01266 FAD dependent oxidoreductase CF61_RS14180 PF10968 Protein of unknown function (DUF2770) CF61_RS14185 PF01292 Prokaryotic cytochrome b561 CF61_RS14190 PF04264 YceI-like domain CF61_RS14195 PF00581 Rhodanese-like domain CF61_RS14195 PF17773 UPF0176 acylphosphatase like domain CF61_RS14195 PF12368 Rhodanase C-terminal CF61_RS14200 PF03279 Bacterial lipid A biosynthesis acyltransferase CF61_RS14205 PF07690 Major Facilitator Superfamily CF61_RS14215 PF13984 MsyB protein CF61_RS14220 PF07119 Protein of unknown function (DUF1375) CF61_RS14225 PF00535 Glycosyl transferase family 2 CF61_RS14230 PF04349 Periplasmic glucan biosynthesis protein, MdoG CF61_RS14245 PF01757 Acyltransferase family CF61_RS14250 PF13091 PLD-like domain CF61_RS14255 PF01661 Macro domain CF61_RS14260 PF03400 IS1 transposase CF61_RS14270 PF10610 Thin aggregative fimbriae synthesis protein CF61_RS14275 PF07012 Curlin associated repeat CF61_RS14280 PF07012 Curlin associated repeat CF61_RS14290 PF00196 Bacterial regulatory proteins, luxR family CF61_RS14295 PF10627 Curli assembly protein CsgE CF61_RS14300 PF10614 Type VIII secretion system (T8SS), CsgF protein CF61_RS14305 PF03783 Curli production assembly/transport component CsgG CF61_RS14310 PF06496 Protein of unknown function (DUF1097) CF61_RS14315 PF02613 Nitrate reductase delta subunit CF61_RS14320 PF02811 PHP domain CF61_RS14325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CF61_RS14350 PF01527 Transposase CF61_RS14360 PF00990 Diguanylate cyclase, GGDEF domain CF61_RS14360 PF17158 Membrane-associated sensor, integral membrane domain CF61_RS14370 PF01522 Polysaccharide deacetylase CF61_RS14370 PF14883 Hypothetical glycosyl hydrolase family 13 CF61_RS14375 PF00535 Glycosyl transferase family 2 CF61_RS14380 PF13994 PgaD-like protein CF61_RS14385 PF02562 PhoH-like protein CF61_RS14395 PF04261 Dyp-type peroxidase family CF61_RS14400 PF13473 Cupredoxin-like domain CF61_RS14400 PF09375 Imelysin CF61_RS14405 PF03239 Iron permease FTR1 family CF61_RS14415 PF00474 Sodium:solute symporter family CF61_RS14425 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CF61_RS14425 PF01619 Proline dehydrogenase CF61_RS14425 PF14850 DNA-binding domain of Proline dehydrogenase CF61_RS14425 PF00171 Aldehyde dehydrogenase family CF61_RS14430 PF00440 Bacterial regulatory proteins, tetR family CF61_RS14430 PF08362 YcdC-like protein, C-terminal region CF61_RS14435 PF00296 Luciferase-like monooxygenase CF61_RS14440 PF00857 Isochorismatase family CF61_RS14445 PF01042 Endoribonuclease L-PSP CF61_RS14450 PF12697 Alpha/beta hydrolase family CF61_RS14455 PF00881 Nitroreductase family CF61_RS14460 PF01613 Flavin reductase like domain CF61_RS14465 PF00860 Permease family CF61_RS14470 PF10685 Stress-induced bacterial acidophilic repeat motif CF61_RS14480 PF03358 NADPH-dependent FMN reductase CF61_RS14485 PF13993 YccJ-like protein CF61_RS14490 PF00328 Histidine phosphatase superfamily (branch 2) CF61_RS14500 PF01556 DnaJ C terminal domain CF61_RS14500 PF00226 DnaJ domain CF61_RS14510 PF02613 Nitrate reductase delta subunit CF61_RS14515 PF18364 Molybdopterin oxidoreductase N-terminal domain CF61_RS14515 PF00384 Molybdopterin oxidoreductase CF61_RS14515 PF01568 Molydopterin dinucleotide binding domain CF61_RS14520 PF03264 NapC/NirT cytochrome c family, N-terminal region CF61_RS14525 PF00486 Transcriptional regulatory protein, C terminal CF61_RS14525 PF00072 Response regulator receiver domain CF61_RS14530 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CF61_RS14535 PF00072 Response regulator receiver domain CF61_RS14535 PF01627 Hpt domain CF61_RS14535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS14535 PF00672 HAMP domain CF61_RS14535 PF00512 His Kinase A (phospho-acceptor) domain CF61_RS14540 PF12801 4Fe-4S binding domain CF61_RS14545 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system CF61_RS14550 PF15939 Putative antitoxin of bacterial toxin-antitoxin system CF61_RS14555 PF00313 'Cold-shock' DNA-binding domain CF61_RS14560 PF00313 'Cold-shock' DNA-binding domain CF61_RS14570 PF03400 IS1 transposase CF61_RS14575 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF CF61_RS14580 PF06251 Capsule biosynthesis GfcC CF61_RS14585 PF06082 Exopolysaccharide biosynthesis protein YbjH CF61_RS14590 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CF61_RS14590 PF10531 SLBB domain CF61_RS14590 PF02563 Polysaccharide biosynthesis/export protein CF61_RS14595 PF01451 Low molecular weight phosphotyrosine protein phosphatase CF61_RS14600 PF13807 G-rich domain on putative tyrosine kinase CF61_RS14600 PF13614 AAA domain CF61_RS14600 PF02706 Chain length determinant protein CF61_RS14605 PF00328 Histidine phosphatase superfamily (branch 2) CF61_RS14610 PF08173 Membrane bound YbgT-like protein CF61_RS14615 PF02322 Cytochrome bd terminal oxidase subunit II CF61_RS14620 PF01654 Cytochrome bd terminal oxidase subunit I CF61_RS14625 PF04809 HupH hydrogenase expression protein, C-terminal conserved region CF61_RS14630 PF07449 Hydrogenase-1 expression protein HyaE CF61_RS14635 PF01750 Hydrogenase maturation protease CF61_RS14640 PF01292 Prokaryotic cytochrome b561 CF61_RS14645 PF00374 Nickel-dependent hydrogenase CF61_RS14650 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CF61_RS14650 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CF61_RS14660 PF01027 Inhibitor of apoptosis-promoting Bax1 CF61_RS14665 PF04358 DsrC like protein CF61_RS14670 PF00708 Acylphosphatase CF61_RS14675 PF17785 PUA-like domain CF61_RS14675 PF10672 S-adenosylmethionine-dependent methyltransferase CF61_RS14680 PF08755 Hemimethylated DNA-binding protein YccV like CF61_RS14685 PF13380 CoA binding domain CF61_RS14695 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CF61_RS14700 PF02142 MGS-like domain CF61_RS14705 PF00580 UvrD/REP helicase N-terminal domain CF61_RS14705 PF13361 UvrD-like helicase C-terminal domain CF61_RS14705 PF12462 DNA helicase IV / RNA helicase N terminal CF61_RS14710 PF03733 Inner membrane component domain CF61_RS14715 PF12805 FUSC-like inner membrane protein yccS CF61_RS14720 PF04994 TfoX C-terminal domain CF61_RS14720 PF04993 TfoX N-terminal domain CF61_RS14725 PF03846 Cell division inhibitor SulA CF61_RS14735 PF01389 OmpA-like transmembrane domain CF61_RS14735 PF00691 OmpA family CF61_RS14740 PF06303 MatP N-terminal domain CF61_RS14740 PF17414 MatP C-terminal ribbon-helix-helix domain CF61_RS14745 PF05362 Lon protease (S16) C-terminal proteolytic domain CF61_RS14745 PF13654 AAA domain CF61_RS14750 PF07977 FabA-like domain CF61_RS14755 PF04957 Ribosome modulation factor CF61_RS14760 PF03886 ABC-type transport auxiliary lipoprotein component CF61_RS14765 PF02470 MlaD protein CF61_RS14770 PF04403 Paraquat-inducible protein A CF61_RS14775 PF16326 ABC transporter C-terminal domain CF61_RS14775 PF12848 ABC transporter CF61_RS14775 PF00005 ABC transporter CF61_RS14780 PF10672 S-adenosylmethionine-dependent methyltransferase CF61_RS14780 PF01170 Putative RNA methylase family UPF0020 CF61_RS14780 PF02926 THUMP domain CF61_RS14785 PF03476 MOSC N-terminal beta barrel domain CF61_RS14785 PF03473 MOSC domain CF61_RS14785 PF00111 2Fe-2S iron-sulfur cluster binding domain CF61_RS14790 PF07126 Cell-division protein ZapC CF61_RS14795 PF01180 Dihydroorotate dehydrogenase CF61_RS14800 PF02753 Pili assembly chaperone PapD, C-terminal domain CF61_RS14800 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF61_RS14805 PF00419 Fimbrial protein CF61_RS14810 PF00419 Fimbrial protein CF61_RS14815 PF00419 Fimbrial protein CF61_RS14820 PF00577 Outer membrane usher protein CF61_RS14820 PF13954 PapC N-terminal domain CF61_RS14820 PF13953 PapC C-terminal domain CF61_RS14825 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF61_RS14825 PF02753 Pili assembly chaperone PapD, C-terminal domain CF61_RS14830 PF00419 Fimbrial protein CF61_RS14835 PF03358 NADPH-dependent FMN reductase CF61_RS14840 PF09084 NMT1/THI5 like CF61_RS14845 PF00296 Luciferase-like monooxygenase CF61_RS14850 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS14855 PF00005 ABC transporter CF61_RS14860 PF01433 Peptidase family M1 domain CF61_RS14860 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CF61_RS14860 PF11940 Domain of unknown function (DUF3458) Ig-like fold CF61_RS14865 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CF61_RS14865 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CF61_RS14870 PF01336 OB-fold nucleic acid binding domain CF61_RS14870 PF00152 tRNA synthetases class II (D, K and N) CF61_RS14875 PF00267 Gram-negative porin CF61_RS14885 PF00155 Aminotransferase class I and II CF61_RS14890 PF00753 Metallo-beta-lactamase superfamily CF61_RS14895 PF05951 Bacterial protein of unknown function (DUF882) CF61_RS14900 PF01471 Putative peptidoglycan binding domain CF61_RS14900 PF03734 L,D-transpeptidase catalytic domain CF61_RS14905 PF16330 MukB hinge domain CF61_RS14905 PF04310 MukB N-terminal CF61_RS14910 PF04288 MukE-like family CF61_RS14915 PF17193 MukF C-terminal domain CF61_RS14915 PF17192 MukF middle domain CF61_RS14915 PF03882 MukF winged-helix domain CF61_RS14920 PF13847 Methyltransferase domain CF61_RS14925 PF02698 DUF218 domain CF61_RS14930 PF01636 Phosphotransferase enzyme family CF61_RS14935 PF02348 Cytidylyltransferase CF61_RS14940 PF03966 Trm112p-like protein CF61_RS14945 PF06224 Winged helix DNA-binding domain CF61_RS14950 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CF61_RS14955 PF00664 ABC transporter transmembrane region CF61_RS14955 PF00005 ABC transporter CF61_RS14960 PF03772 Competence protein CF61_RS14960 PF00753 Metallo-beta-lactamase superfamily CF61_RS14965 PF00216 Bacterial DNA-binding protein CF61_RS14970 PF00575 S1 RNA binding domain CF61_RS14975 PF02224 Cytidylate kinase CF61_RS14980 PF01435 Peptidase family M48 CF61_RS14985 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CF61_RS14990 PF00266 Aminotransferase class-V CF61_RS14995 PF04239 Protein of unknown function (DUF421) CF61_RS15000 PF18381 YcaO cyclodehydratase C-terminal domain CF61_RS15000 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CF61_RS15005 PF01226 Formate/nitrite transporter CF61_RS15010 PF02901 Pyruvate formate lyase-like CF61_RS15010 PF01228 Glycine radical CF61_RS15015 PF04055 Radical SAM superfamily CF61_RS15020 PF02525 Flavodoxin-like fold CF61_RS15025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS15025 PF03466 LysR substrate binding domain CF61_RS15030 PF13520 Amino acid permease CF61_RS15035 PF07690 Major Facilitator Superfamily CF61_RS15040 PF00857 Isochorismatase family CF61_RS15045 PF04976 DMSO reductase anchor subunit (DmsC) CF61_RS15050 PF12800 4Fe-4S binding domain CF61_RS15050 PF13247 4Fe-4S dicluster domain CF61_RS15055 PF00384 Molybdopterin oxidoreductase CF61_RS15055 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF61_RS15055 PF01568 Molydopterin dinucleotide binding domain CF61_RS15060 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CF61_RS15060 PF02403 Seryl-tRNA synthetase N-terminal domain CF61_RS15065 PF00004 ATPase family associated with various cellular activities (AAA) CF61_RS15065 PF16193 AAA C-terminal domain CF61_RS15065 PF12002 MgsA AAA+ ATPase C terminal CF61_RS15070 PF03548 Outer membrane lipoprotein carrier protein LolA CF61_RS15075 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CF61_RS15075 PF01580 FtsK/SpoIIIE family CF61_RS15075 PF09397 Ftsk gamma domain CF61_RS15075 PF17854 FtsK alpha domain CF61_RS15080 PF01037 Lrp/AsnC ligand binding domain CF61_RS15085 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF61_RS15090 PF00664 ABC transporter transmembrane region CF61_RS15090 PF00005 ABC transporter CF61_RS15095 PF00005 ABC transporter CF61_RS15095 PF00664 ABC transporter transmembrane region CF61_RS15100 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CF61_RS15105 PF01176 Translation initiation factor 1A / IF-1 CF61_RS15115 PF10431 C-terminal, D2-small domain, of ClpB protein CF61_RS15115 PF02861 Clp amino terminal domain, pathogenicity island component CF61_RS15115 PF17871 AAA lid domain CF61_RS15115 PF07724 AAA domain (Cdc48 subfamily) CF61_RS15115 PF00004 ATPase family associated with various cellular activities (AAA) CF61_RS15120 PF02617 ATP-dependent Clp protease adaptor protein ClpS CF61_RS15125 PF00313 'Cold-shock' DNA-binding domain CF61_RS15130 PF02687 FtsX-like permease family CF61_RS15130 PF12704 MacB-like periplasmic core domain CF61_RS15130 PF00005 ABC transporter CF61_RS15135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF61_RS15140 PF04393 Protein of unknown function (DUF535) CF61_RS15145 PF11398 Protein of unknown function (DUF2813) CF61_RS15160 PF03956 Lysine exporter LysO CF61_RS15165 PF03063 Prismane/CO dehydrogenase family CF61_RS15170 PF00111 2Fe-2S iron-sulfur cluster binding domain CF61_RS15170 PF00970 Oxidoreductase FAD-binding domain CF61_RS15170 PF00175 Oxidoreductase NAD-binding domain CF61_RS15175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CF61_RS15175 PF00205 Thiamine pyrophosphate enzyme, central domain CF61_RS15175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CF61_RS15180 PF01212 Beta-eliminating lyase CF61_RS15185 PF13460 NAD(P)H-binding CF61_RS15185 PF11066 Protein of unknown function (DUF2867) CF61_RS15190 PF01370 NAD dependent epimerase/dehydratase family CF61_RS15195 PF01510 N-acetylmuramoyl-L-alanine amidase CF61_RS15200 PF01906 Putative heavy-metal-binding CF61_RS15205 PF12883 Protein of unknown function (DUF3828) CF61_RS15210 PF00005 ABC transporter CF61_RS15215 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF61_RS15220 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS15225 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS15230 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF61_RS15235 PF05958 tRNA (Uracil-5-)-methyltransferase CF61_RS15240 PF10767 Protein of unknown function (DUF2593) CF61_RS15245 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS15250 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS15255 PF00005 ABC transporter CF61_RS15255 PF08402 TOBE domain CF61_RS15260 PF13416 Bacterial extracellular solute-binding protein CF61_RS15270 PF10722 Putative bacterial sensory transduction regulator CF61_RS15275 PF18030 RimK PreATP-grasp domain CF61_RS15275 PF08443 RimK-like ATP-grasp domain CF61_RS15280 PF00881 Nitroreductase family CF61_RS15285 PF00881 Nitroreductase family CF61_RS15290 PF07214 Protein of unknown function (DUF1418) CF61_RS15295 PF00462 Glutaredoxin CF61_RS15300 PF11045 Putative inner membrane protein of Enterobacteriaceae CF61_RS15305 PF06826 Predicted Permease Membrane Region CF61_RS15305 PF02080 TrkA-C domain CF61_RS15310 PF00440 Bacterial regulatory proteins, tetR family CF61_RS15315 PF07690 Major Facilitator Superfamily CF61_RS15330 PF07690 Major Facilitator Superfamily CF61_RS15335 PF01569 PAP2 superfamily CF61_RS15340 PF08220 DeoR-like helix-turn-helix domain CF61_RS15340 PF00455 DeoR C terminal sensor domain CF61_RS15345 PF00768 D-alanyl-D-alanine carboxypeptidase CF61_RS15345 PF07943 Penicillin-binding protein 5, C-terminal domain CF61_RS15350 PF13417 Glutathione S-transferase, N-terminal domain CF61_RS15350 PF00043 Glutathione S-transferase, C-terminal domain CF61_RS15360 PF10799 Biofilm formation protein (YliH/bssR) CF61_RS15365 PF18693 TRAM domain CF61_RS15365 PF00919 Uncharacterized protein family UPF0004 CF61_RS15365 PF04055 Radical SAM superfamily CF61_RS15370 PF17156 Gammaproteobacterial periplasmic sensor domain CF61_RS15370 PF00990 Diguanylate cyclase, GGDEF domain CF61_RS15375 PF00563 EAL domain CF61_RS15375 PF17153 Periplasmic sensor domain, extracellular CF61_RS15380 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS15380 PF12911 N-terminal TM domain of oligopeptide transport permease C CF61_RS15385 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS15390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF61_RS15395 PF00005 ABC transporter CF61_RS15395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CF61_RS15400 PF01112 Asparaginase CF61_RS15405 PF03453 MoeA N-terminal region (domain I and II) CF61_RS15405 PF03454 MoeA C-terminal region (domain IV) CF61_RS15405 PF00994 Probable molybdopterin binding domain CF61_RS15410 PF00899 ThiF family CF61_RS15415 PF00923 Transaldolase/Fructose-6-phosphate aldolase CF61_RS15420 PF04055 Radical SAM superfamily CF61_RS15425 PF01228 Glycine radical CF61_RS15425 PF02901 Pyruvate formate lyase-like CF61_RS15435 PF07350 Protein of unknown function (DUF1479) CF61_RS15440 PF00005 ABC transporter CF61_RS15440 PF12848 ABC transporter CF61_RS15445 PF03734 L,D-transpeptidase catalytic domain CF61_RS15445 PF17969 L,D-transpeptidase C-terminal domain CF61_RS15450 PF03600 Citrate transporter CF61_RS15455 PF01325 Iron dependent repressor, N-terminal DNA binding domain CF61_RS15455 PF02742 Iron dependent repressor, metal binding and dimerisation domain CF61_RS15465 PF00884 Sulfatase CF61_RS15470 PF13505 Outer membrane protein beta-barrel domain CF61_RS15475 PF00892 EamA-like transporter family CF61_RS15480 PF00210 Ferritin-like domain CF61_RS15490 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF61_RS15495 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS15500 PF00005 ABC transporter CF61_RS15505 PF00924 Mechanosensitive ion channel CF61_RS15510 PF05971 RNA methyltransferase CF61_RS15515 PF07338 Protein of unknown function (DUF1471) CF61_RS15520 PF00593 TonB dependent receptor CF61_RS15520 PF07715 TonB-dependent Receptor Plug Domain CF61_RS15525 PF18331 PKHD-type hydroxylase C-terminal domain CF61_RS15525 PF13640 2OG-Fe(II) oxygenase superfamily CF61_RS15530 PF01258 Prokaryotic dksA/traR C4-type zinc finger CF61_RS15535 PF07338 Protein of unknown function (DUF1471) CF61_RS15540 PF02615 Malate/L-lactate dehydrogenase CF61_RS15545 PF02885 Glycosyl transferase family, helical bundle domain CF61_RS15550 PF06733 DEAD_2 CF61_RS15550 PF00270 DEAD/DEAH box helicase CF61_RS15550 PF13307 Helicase C-terminal domain CF61_RS15555 PF08719 Domain of unknown function (DUF1768) CF61_RS15560 PF00271 Helicase conserved C-terminal domain CF61_RS15560 PF00270 DEAD/DEAH box helicase CF61_RS15565 PF09209 Tetracyclin repressor-like, C-terminal domain CF61_RS15565 PF00440 Bacterial regulatory proteins, tetR family CF61_RS15570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF61_RS15575 PF00005 ABC transporter CF61_RS15590 PF11076 Putative inner membrane protein YbhQ CF61_RS15595 PF03372 Endonuclease/Exonuclease/phosphatase family CF61_RS15600 PF13091 PLD-like domain CF61_RS15605 PF03706 Lysylphosphatidylglycerol synthase TM region CF61_RS15610 PF01027 Inhibitor of apoptosis-promoting Bax1 CF61_RS15615 PF01027 Inhibitor of apoptosis-promoting Bax1 CF61_RS15620 PF02391 MoaE protein CF61_RS15625 PF02597 ThiS family CF61_RS15630 PF01967 MoaC family CF61_RS15635 PF00994 Probable molybdopterin binding domain CF61_RS15640 PF06463 Molybdenum Cofactor Synthesis C CF61_RS15640 PF04055 Radical SAM superfamily CF61_RS15650 PF01933 Uncharacterised protein family UPF0052 CF61_RS15655 PF00271 Helicase conserved C-terminal domain CF61_RS15655 PF04851 Type III restriction enzyme, res subunit CF61_RS15655 PF17757 UvrB interaction domain CF61_RS15655 PF02151 UvrB/uvrC motif CF61_RS15655 PF12344 Ultra-violet resistance protein B CF61_RS15665 PF08241 Methyltransferase domain CF61_RS15670 PF00155 Aminotransferase class I and II CF61_RS15675 PF06968 Biotin and Thiamin Synthesis associated domain CF61_RS15675 PF04055 Radical SAM superfamily CF61_RS15680 PF00202 Aminotransferase class-III CF61_RS15685 PF01161 Phosphatidylethanolamine-binding protein CF61_RS15695 PF00717 Peptidase S24-like CF61_RS15800 PF00293 NUDIX domain CF61_RS15825 PF03245 Bacteriophage Rz lysis protein CF61_RS15850 PF00149 Calcineurin-like phosphoesterase CF61_RS15885 PF05772 NinB protein CF61_RS15890 PF03796 DnaB-like helicase C terminal domain CF61_RS15890 PF00772 DnaB-like helicase N terminal domain CF61_RS15910 PF01381 Helix-turn-helix CF61_RS15910 PF00717 Peptidase S24-like CF61_RS15950 PF04098 Rad52/22 family double-strand break repair protein CF61_RS15955 PF00436 Single-strand binding protein family CF61_RS16005 PF00589 Phage integrase family CF61_RS16005 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain CF61_RS16010 PF01095 Pectinesterase CF61_RS16015 PF00694 Aconitase C-terminal domain CF61_RS16015 PF00330 Aconitase family (aconitate hydratase) CF61_RS16020 PF00939 Sodium:sulfate symporter transmembrane region CF61_RS16025 PF04303 PrpF protein CF61_RS16030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS16030 PF03466 LysR substrate binding domain CF61_RS16035 PF10282 Lactonase, 7-bladed beta-propeller CF61_RS16045 PF03459 TOBE domain CF61_RS16045 PF00005 ABC transporter CF61_RS16050 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS16060 PF10766 Multidrug efflux pump-associated protein AcrZ CF61_RS16065 PF03459 TOBE domain CF61_RS16065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS16075 PF00005 ABC transporter CF61_RS16080 PF16363 GDP-mannose 4,6 dehydratase CF61_RS16085 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CF61_RS16085 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CF61_RS16090 PF00288 GHMP kinases N terminal domain CF61_RS16090 PF08544 GHMP kinases C terminal CF61_RS16090 PF10509 Galactokinase galactose-binding signature CF61_RS16095 PF01263 Aldose 1-epimerase CF61_RS16100 PF00300 Histidine phosphatase superfamily (branch 1) CF61_RS16105 PF00793 DAHP synthetase I family CF61_RS16115 PF13985 YbgS-like protein CF61_RS16120 PF01545 Cation efflux family CF61_RS16125 PF04973 Nicotinamide mononucleotide transporter CF61_RS16130 PF02445 Quinolinate synthetase A protein CF61_RS16170 PF16331 TolA binding protein trimerisation CF61_RS16170 PF13174 Tetratricopeptide repeat CF61_RS16175 PF00691 OmpA family CF61_RS16180 PF04052 TolB amino-terminal domain CF61_RS16180 PF07676 WD40-like Beta Propeller Repeat CF61_RS16185 PF06519 TolA C-terminal CF61_RS16190 PF02472 Biopolymer transport protein ExbD/TolR CF61_RS16195 PF01618 MotA/TolQ/ExbB proton channel family CF61_RS16200 PF03061 Thioesterase superfamily CF61_RS16205 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CF61_RS16210 PF08173 Membrane bound YbgT-like protein CF61_RS16215 PF02322 Cytochrome bd terminal oxidase subunit II CF61_RS16220 PF01654 Cytochrome bd terminal oxidase subunit I CF61_RS16230 PF01074 Glycosyl hydrolases family 38 N-terminal domain CF61_RS16230 PF07748 Glycosyl hydrolases family 38 C-terminal domain CF61_RS16230 PF09261 Alpha mannosidase middle domain CF61_RS16235 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF61_RS16235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF61_RS16235 PF02378 Phosphotransferase system, EIIC CF61_RS16240 PF07702 UTRA domain CF61_RS16240 PF00392 Bacterial regulatory proteins, gntR family CF61_RS16245 PF00549 CoA-ligase CF61_RS16245 PF02629 CoA binding domain CF61_RS16250 PF08442 ATP-grasp domain CF61_RS16250 PF00549 CoA-ligase CF61_RS16255 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CF61_RS16255 PF02817 e3 binding domain CF61_RS16255 PF00364 Biotin-requiring enzyme CF61_RS16260 PF16078 2-oxoglutarate dehydrogenase N-terminus CF61_RS16260 PF00676 Dehydrogenase E1 component CF61_RS16260 PF16870 2-oxoglutarate dehydrogenase C-terminal CF61_RS16260 PF02779 Transketolase, pyrimidine binding domain CF61_RS16270 PF13085 2Fe-2S iron-sulfur cluster binding domain CF61_RS16275 PF02910 Fumarate reductase flavoprotein C-term CF61_RS16275 PF00890 FAD binding domain CF61_RS16280 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CF61_RS16285 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CF61_RS16295 PF00285 Citrate synthase, C-terminal domain CF61_RS16300 PF00419 Fimbrial protein CF61_RS16305 PF13953 PapC C-terminal domain CF61_RS16305 PF00577 Outer membrane usher protein CF61_RS16305 PF13954 PapC N-terminal domain CF61_RS16310 PF02753 Pili assembly chaperone PapD, C-terminal domain CF61_RS16310 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF61_RS16315 PF00419 Fimbrial protein CF61_RS16320 PF05145 Transition state regulatory protein AbrB CF61_RS16325 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CF61_RS16325 PF06827 Zinc finger found in FPG and IleRS CF61_RS16325 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CF61_RS16330 PF03746 LamB/YcsF family CF61_RS16335 PF02626 Carboxyltransferase domain, subdomain A and B CF61_RS16340 PF02682 Carboxyltransferase domain, subdomain C and D CF61_RS16345 PF01784 NIF3 (NGG1p interacting factor 3) CF61_RS16350 PF00854 POT family CF61_RS16355 PF00875 DNA photolyase CF61_RS16355 PF03441 FAD binding domain of DNA photolyase CF61_RS16360 PF08349 Protein of unknown function (DUF1722) CF61_RS16365 PF13808 DDE_Tnp_1-associated CF61_RS16365 PF01609 Transposase DDE domain CF61_RS16370 PF13808 DDE_Tnp_1-associated CF61_RS16370 PF01609 Transposase DDE domain CF61_RS16375 PF13808 DDE_Tnp_1-associated CF61_RS16385 PF05593 RHS Repeat CF61_RS16385 PF15606 Bacterial toxin 34 CF61_RS16385 PF03527 RHS protein CF61_RS16390 PF10725 Protein of unknown function (DUF2517) CF61_RS16395 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) CF61_RS16400 PF03814 Potassium-transporting ATPase A subunit CF61_RS16410 PF02669 K+-transporting ATPase, c chain CF61_RS16415 PF13492 GAF domain CF61_RS16415 PF13493 Domain of unknown function (DUF4118) CF61_RS16415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS16415 PF00512 His Kinase A (phospho-acceptor) domain CF61_RS16415 PF02702 Osmosensitive K+ channel His kinase sensor domain CF61_RS16420 PF00072 Response regulator receiver domain CF61_RS16420 PF00486 Transcriptional regulatory protein, C terminal CF61_RS16430 PF01276 Orn/Lys/Arg decarboxylase, major domain CF61_RS16430 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CF61_RS16430 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CF61_RS16435 PF13520 Amino acid permease CF61_RS16445 PF10946 Protein of unknown function DUF2625 CF61_RS16455 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CF61_RS16455 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CF61_RS16455 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CF61_RS16455 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CF61_RS16460 PF03925 SeqA protein C-terminal domain CF61_RS16460 PF17206 SeqA protein N-terminal domain CF61_RS16465 PF12697 Alpha/beta hydrolase family CF61_RS16470 PF01402 Ribbon-helix-helix protein, copG family CF61_RS16475 PF00258 Flavodoxin CF61_RS16490 PF01475 Ferric uptake regulator family CF61_RS16495 PF13982 YbfN-like lipoprotein CF61_RS16500 PF03573 outer membrane porin, OprD family CF61_RS16505 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CF61_RS16505 PF00749 tRNA synthetases class I (E and Q), catalytic domain CF61_RS16510 PF02378 Phosphotransferase system, EIIC CF61_RS16510 PF00367 phosphotransferase system, EIIB CF61_RS16510 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CF61_RS16515 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CF61_RS16520 PF01979 Amidohydrolase family CF61_RS16525 PF01047 MarR family CF61_RS16525 PF00480 ROK family CF61_RS16530 PF13344 Haloacid dehalogenase-like hydrolase CF61_RS16535 PF13537 Glutamine amidotransferase domain CF61_RS16535 PF00733 Asparagine synthase CF61_RS16575 PF01494 FAD binding domain CF61_RS16580 PF04055 Radical SAM superfamily CF61_RS16580 PF00919 Uncharacterized protein family UPF0004 CF61_RS16580 PF01938 TRAM domain CF61_RS16585 PF02562 PhoH-like protein CF61_RS16590 PF02130 Uncharacterized protein family UPF0054 CF61_RS16595 PF00571 CBS domain CF61_RS16595 PF03471 Transporter associated domain CF61_RS16600 PF00795 Carbon-nitrogen hydrolase CF61_RS16605 PF01694 Rhomboid family CF61_RS16610 PF00497 Bacterial extracellular solute-binding proteins, family 3 CF61_RS16615 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS16620 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS16625 PF00005 ABC transporter CF61_RS16630 PF01156 Inosine-uridine preferring nucleoside hydrolase CF61_RS16635 PF00012 Hsp70 protein CF61_RS16645 PF06889 Protein of unknown function (DUF1266) CF61_RS16650 PF08238 Sel1 repeat CF61_RS16660 PF06889 Protein of unknown function (DUF1266) CF61_RS16665 PF08238 Sel1 repeat CF61_RS16670 PF07295 Zinc-ribbon containing domain CF61_RS16675 PF08264 Anticodon-binding domain of tRNA CF61_RS16675 PF13603 Leucyl-tRNA synthetase, Domain 2 CF61_RS16675 PF00133 tRNA synthetases class I (I, L, M and V) CF61_RS16680 PF04390 Lipopolysaccharide-assembly CF61_RS16685 PF06144 DNA polymerase III, delta subunit CF61_RS16685 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CF61_RS16690 PF01467 Cytidylyltransferase-like CF61_RS16695 PF00300 Histidine phosphatase superfamily (branch 1) CF61_RS16705 PF02590 Predicted SPOUT methyltransferase CF61_RS16710 PF03717 Penicillin-binding Protein dimerisation domain CF61_RS16710 PF00905 Penicillin binding protein transpeptidase domain CF61_RS16715 PF01098 Cell cycle protein CF61_RS16720 PF03330 Lytic transglycolase CF61_RS16720 PF05036 Sporulation related domain CF61_RS16725 PF07943 Penicillin-binding protein 5, C-terminal domain CF61_RS16725 PF00768 D-alanyl-D-alanine carboxypeptidase CF61_RS16730 PF04359 Protein of unknown function (DUF493) CF61_RS16735 PF03099 Biotin/lipoate A/B protein ligase family CF61_RS16745 PF03466 LysR substrate binding domain CF61_RS16745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS16750 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CF61_RS16750 PF04055 Radical SAM superfamily CF61_RS16755 PF02416 mttA/Hcf106 family CF61_RS16760 PF00795 Carbon-nitrogen hydrolase CF61_RS16765 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CF61_RS16770 PF00313 'Cold-shock' DNA-binding domain CF61_RS16775 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP CF61_RS16780 PF03606 C4-dicarboxylate anaerobic carrier CF61_RS16785 PF12431 Transcriptional regulator CF61_RS16785 PF00072 Response regulator receiver domain CF61_RS16790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS16790 PF17203 Single cache domain 3 CF61_RS16790 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CF61_RS16790 PF00989 PAS fold CF61_RS16795 PF08218 Citrate lyase ligase C-terminal domain CF61_RS16800 PF06857 Malonate decarboxylase delta subunit (MdcD) CF61_RS16805 PF03328 HpcH/HpaI aldolase/citrate lyase family CF61_RS16810 PF04223 Citrate lyase, alpha subunit (CitF) CF61_RS16815 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CF61_RS16820 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CF61_RS16825 PF00939 Sodium:sulfate symporter transmembrane region CF61_RS16830 PF00445 Ribonuclease T2 family CF61_RS16835 PF14760 Rnk N-terminus CF61_RS16835 PF01272 Transcription elongation factor, GreA/GreB, C-term CF61_RS16845 PF08240 Alcohol dehydrogenase GroES-like domain CF61_RS16845 PF13823 Alcohol dehydrogenase GroES-associated CF61_RS16845 PF00107 Zinc-binding dehydrogenase CF61_RS16850 PF00582 Universal stress protein family CF61_RS16855 PF13192 Thioredoxin domain CF61_RS16855 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF61_RS16860 PF10417 C-terminal domain of 1-Cys peroxiredoxin CF61_RS16860 PF00578 AhpC/TSA family CF61_RS16865 PF13098 Thioredoxin-like domain CF61_RS16870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS16870 PF03466 LysR substrate binding domain CF61_RS16875 PF11922 Domain of unknown function (DUF3440) CF61_RS16875 PF01507 Phosphoadenosine phosphosulfate reductase family CF61_RS16880 PF02195 ParB-like nuclease domain CF61_RS16885 PF00155 Aminotransferase class I and II CF61_RS16890 PF00465 Iron-containing alcohol dehydrogenase CF61_RS16895 PF04328 Selenoprotein, putative CF61_RS16900 PF13722 5TM C-terminal transporter carbon starvation CstA CF61_RS16900 PF02554 Carbon starvation protein CstA CF61_RS16905 PF03061 Thioesterase superfamily CF61_RS16915 PF00550 Phosphopantetheine attachment site CF61_RS16915 PF00857 Isochorismatase family CF61_RS16920 PF00501 AMP-binding enzyme CF61_RS16920 PF13193 AMP-binding enzyme C-terminal domain CF61_RS16925 PF00425 chorismate binding enzyme CF61_RS16930 PF01497 Periplasmic binding protein CF61_RS16935 PF05977 Transmembrane secretion effector CF61_RS16940 PF01032 FecCD transport family CF61_RS16945 PF01032 FecCD transport family CF61_RS16950 PF00005 ABC transporter CF61_RS16955 PF02706 Chain length determinant protein CF61_RS16960 PF00975 Thioesterase domain CF61_RS16960 PF00668 Condensation domain CF61_RS16960 PF00550 Phosphopantetheine attachment site CF61_RS16960 PF00501 AMP-binding enzyme CF61_RS16960 PF13193 AMP-binding enzyme C-terminal domain CF61_RS16965 PF03621 MbtH-like protein CF61_RS16970 PF00756 Putative esterase CF61_RS16970 PF11806 Domain of unknown function (DUF3327) CF61_RS16975 PF00593 TonB dependent receptor CF61_RS16975 PF07715 TonB-dependent Receptor Plug Domain CF61_RS16980 PF01648 4'-phosphopantetheinyl transferase superfamily CF61_RS16980 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CF61_RS16985 PF01609 Transposase DDE domain CF61_RS16990 PF01848 Hok/gef family CF61_RS17000 PF04107 Glutamate-cysteine ligase family 2(GCS2) CF61_RS17005 PF06643 Protein of unknown function (DUF1158) CF61_RS17010 PF04237 YjbR CF61_RS17015 PF00881 Nitroreductase family CF61_RS17020 PF00924 Mechanosensitive ion channel CF61_RS17025 PF00324 Amino acid permease CF61_RS17030 PF00873 AcrB/AcrD/AcrF family CF61_RS17035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF61_RS17035 PF00529 HlyD membrane-fusion protein of T1SS CF61_RS17040 PF11604 Copper binding periplasmic protein CusF CF61_RS17045 PF02321 Outer membrane efflux protein CF61_RS17050 PF00486 Transcriptional regulatory protein, C terminal CF61_RS17050 PF00072 Response regulator receiver domain CF61_RS17055 PF00512 His Kinase A (phospho-acceptor) domain CF61_RS17055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS17055 PF00672 HAMP domain CF61_RS17060 PF04717 Type VI secretion system, phage-baseplate injector CF61_RS17070 PF05488 PAAR motif CF61_RS17070 PF05593 RHS Repeat CF61_RS17090 PF01609 Transposase DDE domain CF61_RS17090 PF13808 DDE_Tnp_1-associated CF61_RS17100 PF13283 Bacteriophage N adsorption protein A C-term CF61_RS17105 PF14488 Domain of unknown function (DUF4434) CF61_RS17110 PF12833 Helix-turn-helix domain CF61_RS17120 PF00072 Response regulator receiver domain CF61_RS17120 PF00196 Bacterial regulatory proteins, luxR family CF61_RS17125 PF00419 Fimbrial protein CF61_RS17130 PF00419 Fimbrial protein CF61_RS17135 PF00577 Outer membrane usher protein CF61_RS17135 PF13953 PapC C-terminal domain CF61_RS17135 PF13954 PapC N-terminal domain CF61_RS17140 PF02753 Pili assembly chaperone PapD, C-terminal domain CF61_RS17140 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CF61_RS17145 PF00419 Fimbrial protein CF61_RS17150 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CF61_RS17150 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CF61_RS17160 PF04307 LexA-binding, inner membrane-associated putative hydrolase CF61_RS17165 PF01406 tRNA synthetases class I (C) catalytic domain CF61_RS17165 PF09190 DALR domain CF61_RS17170 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CF61_RS17175 PF12850 Calcineurin-like phosphoesterase superfamily domain CF61_RS17180 PF00731 AIR carboxylase CF61_RS17185 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CF61_RS17185 PF02222 ATP-grasp domain CF61_RS17190 PF00696 Amino acid kinase family CF61_RS17195 PF11392 Protein of unknown function (DUF2877) CF61_RS17200 PF06545 Protein of unknown function (DUF1116) CF61_RS17205 PF02629 CoA binding domain CF61_RS17205 PF00549 CoA-ligase CF61_RS17210 PF02615 Malate/L-lactate dehydrogenase CF61_RS17215 PF01546 Peptidase family M20/M25/M40 CF61_RS17220 PF05899 Protein of unknown function (DUF861) CF61_RS17220 PF07883 Cupin domain CF61_RS17225 PF02595 Glycerate kinase family CF61_RS17230 PF00860 Permease family CF61_RS17235 PF01979 Amidohydrolase family CF61_RS17240 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CF61_RS17245 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CF61_RS17245 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CF61_RS17250 PF01261 Xylose isomerase-like TIM barrel CF61_RS17255 PF00205 Thiamine pyrophosphate enzyme, central domain CF61_RS17255 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CF61_RS17255 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CF61_RS17260 PF09339 IclR helix-turn-helix domain CF61_RS17260 PF01614 Bacterial transcriptional regulator CF61_RS17265 PF04115 Ureidoglycolate lyase CF61_RS17270 PF03466 LysR substrate binding domain CF61_RS17270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS17285 PF00005 ABC transporter CF61_RS17290 PF13472 GDSL-like Lipase/Acylhydrolase family CF61_RS17295 PF00106 short chain dehydrogenase CF61_RS17300 PF00085 Thioredoxin CF61_RS17305 PF03649 Uncharacterised protein family (UPF0014) CF61_RS17310 PF00005 ABC transporter CF61_RS17315 PF01145 SPFH domain / Band 7 family CF61_RS17315 PF16200 C-terminal region of band_7 CF61_RS17320 PF01957 NfeD-like C-terminal, partner-binding CF61_RS17325 PF13411 MerR HTH family regulatory protein CF61_RS17330 PF13520 Amino acid permease CF61_RS17335 PF04960 Glutaminase CF61_RS17340 PF00403 Heavy-metal-associated domain CF61_RS17345 PF01381 Helix-turn-helix CF61_RS17350 PF01963 TraB family CF61_RS17355 PF04073 Aminoacyl-tRNA editing domain CF61_RS17360 PF02872 5'-nucleotidase, C-terminal domain CF61_RS17360 PF00149 Calcineurin-like phosphoesterase CF61_RS17365 PF07690 Major Facilitator Superfamily CF61_RS17370 PF02254 TrkA-N domain CF61_RS17370 PF00999 Sodium/hydrogen exchanger family CF61_RS17375 PF00294 pfkB family carbohydrate kinase CF61_RS17380 PF07859 alpha/beta hydrolase fold CF61_RS17385 PF00762 Ferrochelatase CF61_RS17390 PF05191 Adenylate kinase, active site lid CF61_RS17395 PF00183 Hsp90 protein CF61_RS17395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS17400 PF02132 RecR protein CF61_RS17400 PF13662 Toprim domain CF61_RS17405 PF02575 YbaB/EbfC DNA-binding family CF61_RS17410 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CF61_RS17410 PF12169 DNA polymerase III subunits gamma and tau domain III CF61_RS17410 PF12170 DNA polymerase III tau subunit V interacting with alpha CF61_RS17415 PF00156 Phosphoribosyl transferase domain CF61_RS17420 PF04304 Protein of unknown function (DUF454) CF61_RS17425 PF07445 Primosomal replication protein priC CF61_RS17430 PF10689 Protein of unknown function (DUF2496) CF61_RS17440 PF00924 Mechanosensitive ion channel CF61_RS17440 PF12795 Mechanosensitive ion channel porin domain CF61_RS17440 PF12794 Mechanosensitive ion channel inner membrane domain 1 CF61_RS17445 PF00440 Bacterial regulatory proteins, tetR family CF61_RS17445 PF08361 MAATS-type transcriptional repressor, C-terminal region CF61_RS17450 PF00529 HlyD membrane-fusion protein of T1SS CF61_RS17450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF61_RS17455 PF00873 AcrB/AcrD/AcrF family CF61_RS17460 PF10757 Biofilm formation regulator YbaJ CF61_RS17465 PF05321 Haemolysin expression modulating protein CF61_RS17470 PF12464 Maltose acetyltransferase CF61_RS17470 PF14602 Hexapeptide repeat of succinyl-transferase CF61_RS17475 PF10777 Inner membrane protein YlaC CF61_RS17480 PF00563 EAL domain CF61_RS17480 PF12792 CSS motif domain associated with EAL CF61_RS17485 PF07237 Protein of unknown function (DUF1428) CF61_RS17490 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CF61_RS17495 PF09619 Type III secretion system lipoprotein chaperone (YscW) CF61_RS17505 PF00909 Ammonium Transporter Family CF61_RS17510 PF00543 Nitrogen regulatory protein P-II CF61_RS17515 PF00664 ABC transporter transmembrane region CF61_RS17515 PF00005 ABC transporter CF61_RS17520 PF00664 ABC transporter transmembrane region CF61_RS17520 PF00005 ABC transporter CF61_RS17525 PF01037 Lrp/AsnC ligand binding domain CF61_RS17525 PF13404 AsnC-type helix-turn-helix domain CF61_RS17535 PF12793 Sugar transport-related sRNA regulator N-term CF61_RS17535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF61_RS17540 PF06508 Queuosine biosynthesis protein QueC CF61_RS17555 PF13145 PPIC-type PPIASE domain CF61_RS17560 PF00216 Bacterial DNA-binding protein CF61_RS17565 PF00004 ATPase family associated with various cellular activities (AAA) CF61_RS17565 PF05362 Lon protease (S16) C-terminal proteolytic domain CF61_RS17565 PF02190 ATP-dependent protease La (LON) substrate-binding domain CF61_RS17570 PF07724 AAA domain (Cdc48 subfamily) CF61_RS17570 PF10431 C-terminal, D2-small domain, of ClpB protein CF61_RS17570 PF06689 ClpX C4-type zinc finger CF61_RS17575 PF00574 Clp protease CF61_RS17580 PF05698 Bacterial trigger factor protein (TF) C-terminus CF61_RS17580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CF61_RS17580 PF05697 Bacterial trigger factor protein (TF) CF61_RS17590 PF01722 BolA-like protein CF61_RS17595 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CF61_RS17595 PF03923 Uncharacterized lipoprotein CF61_RS17600 PF07690 Major Facilitator Superfamily CF61_RS17605 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CF61_RS17605 PF06481 COX Aromatic Rich Motif CF61_RS17610 PF00115 Cytochrome C and Quinol oxidase polypeptide I CF61_RS17615 PF00510 Cytochrome c oxidase subunit III CF61_RS17620 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CF61_RS17625 PF01040 UbiA prenyltransferase family CF61_RS17630 PF07690 Major Facilitator Superfamily CF61_RS17635 PF04461 Protein of unknown function (DUF520) CF61_RS17640 PF02558 Ketopantoate reductase PanE/ApbA CF61_RS17640 PF08546 Ketopantoate reductase PanE/ApbA C terminal CF61_RS17645 PF01965 DJ-1/PfpI family CF61_RS17650 PF02568 Thiamine biosynthesis protein (ThiI) CF61_RS17650 PF02926 THUMP domain CF61_RS17655 PF02609 Exonuclease VII small subunit CF61_RS17660 PF00348 Polyprenyl synthetase CF61_RS17665 PF02779 Transketolase, pyrimidine binding domain CF61_RS17665 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CF61_RS17665 PF02780 Transketolase, C-terminal domain CF61_RS17670 PF00248 Aldo/keto reductase family CF61_RS17675 PF04608 Phosphatidylglycerophosphatase A CF61_RS17680 PF02769 AIR synthase related protein, C-terminal domain CF61_RS17680 PF00586 AIR synthase related protein, N-terminal domain CF61_RS17685 PF01029 NusB family CF61_RS17690 PF00885 6,7-dimethyl-8-ribityllumazine synthase CF61_RS17695 PF01872 RibD C-terminal domain CF61_RS17695 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CF61_RS17700 PF03477 ATP cone domain CF61_RS17705 PF11622 Protein of unknown function (DUF3251) CF61_RS17710 PF03502 Nucleoside-specific channel-forming protein, Tsx CF61_RS17720 PF01844 HNH endonuclease CF61_RS17725 PF07549 SecD/SecF GG Motif CF61_RS17725 PF02355 Protein export membrane protein CF61_RS17730 PF13721 SecD export protein N-terminal TM region CF61_RS17730 PF02355 Protein export membrane protein CF61_RS17730 PF07549 SecD/SecF GG Motif CF61_RS17735 PF02699 Preprotein translocase subunit CF61_RS17740 PF01702 Queuine tRNA-ribosyltransferase CF61_RS17745 PF02547 Queuosine biosynthesis protein CF61_RS17750 PF04336 Acyl carrier protein phosphodiesterase CF61_RS17755 PF00128 Alpha amylase, catalytic domain CF61_RS17755 PF02903 Alpha amylase, N-terminal ig-like domain CF61_RS17760 PF00324 Amino acid permease CF61_RS17765 PF05525 Branched-chain amino acid transport protein CF61_RS17770 PF11808 Phosphate regulon sensor protein PhoR CF61_RS17770 PF00989 PAS fold CF61_RS17770 PF00512 His Kinase A (phospho-acceptor) domain CF61_RS17770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS17775 PF00486 Transcriptional regulatory protein, C terminal CF61_RS17775 PF00072 Response regulator receiver domain CF61_RS17780 PF12320 Type 5 capsule protein repressor C-terminal domain CF61_RS17780 PF00149 Calcineurin-like phosphoesterase CF61_RS17785 PF13476 AAA domain CF61_RS17790 PF07690 Major Facilitator Superfamily CF61_RS17795 PF00480 ROK family CF61_RS17800 PF04381 Putative exonuclease, RdgC CF61_RS17805 PF10971 Protein of unknown function (DUF2773) CF61_RS17810 PF06865 Pyrimidine/purine nucleoside phosphorylase CF61_RS17815 PF07302 AroM protein CF61_RS17825 PF16362 YaiA protein CF61_RS17830 PF01202 Shikimate kinase CF61_RS17835 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CF61_RS17840 PF14748 Pyrroline-5-carboxylate reductase dimerisation CF61_RS17840 PF03807 NADP oxidoreductase coenzyme F420-dependent CF61_RS17845 PF00990 Diguanylate cyclase, GGDEF domain CF61_RS17845 PF05230 MASE2 domain CF61_RS17850 PF07769 psiF repeat CF61_RS17855 PF00245 Alkaline phosphatase CF61_RS17860 PF10796 Sigma-S stabilisation anti-adaptor protein CF61_RS17870 PF01820 D-ala D-ala ligase N-terminus CF61_RS17870 PF07478 D-ala D-ala ligase C-terminus CF61_RS17875 PF10953 Protein of unknown function (DUF2754) CF61_RS17880 PF10954 Protein of unknown function (DUF2755) CF61_RS17885 PF07759 Protein of unknown function (DUF1615) CF61_RS17890 PF05992 SbmA/BacA-like family CF61_RS17900 PF00144 Beta-lactamase CF61_RS17905 PF15977 Winged helix-turn-helix DNA binding CF61_RS17910 PF03212 Pertactin CF61_RS17910 PF03797 Autotransporter beta-domain CF61_RS17915 PF00490 Delta-aminolevulinic acid dehydratase CF61_RS17920 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CF61_RS17925 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS17930 PF00005 ABC transporter CF61_RS17935 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CF61_RS17940 PF02585 GlcNAc-PI de-N-acetylase CF61_RS17945 PF00535 Glycosyl transferase family 2 CF61_RS17950 PF00132 Bacterial transferase hexapeptide (six repeats) CF61_RS17960 PF02583 Metal-sensitive transcriptional repressor CF61_RS17965 PF08240 Alcohol dehydrogenase GroES-like domain CF61_RS17965 PF00107 Zinc-binding dehydrogenase CF61_RS17970 PF00756 Putative esterase CF61_RS17975 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CF61_RS17980 PF07690 Major Facilitator Superfamily CF61_RS17985 PF07836 DmpG-like communication domain CF61_RS17985 PF00682 HMGL-like CF61_RS17990 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation CF61_RS17990 PF01118 Semialdehyde dehydrogenase, NAD binding domain CF61_RS17995 PF01557 Fumarylacetoacetate (FAA) hydrolase family CF61_RS18000 PF12697 Alpha/beta hydrolase family CF61_RS18005 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CF61_RS18010 PF01494 FAD binding domain CF61_RS18015 PF09339 IclR helix-turn-helix domain CF61_RS18015 PF01614 Bacterial transcriptional regulator CF61_RS18020 PF00356 Bacterial regulatory proteins, lacI family CF61_RS18025 PF02929 Beta galactosidase small chain CF61_RS18025 PF16353 Domain of unknown function(DUF4981) CF61_RS18025 PF00703 Glycosyl hydrolases family 2 CF61_RS18025 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CF61_RS18025 PF02837 Glycosyl hydrolases family 2, sugar binding domain CF61_RS18030 PF01306 LacY proton/sugar symporter CF61_RS18035 PF12464 Maltose acetyltransferase CF61_RS18035 PF00132 Bacterial transferase hexapeptide (six repeats) CF61_RS18040 PF07690 Major Facilitator Superfamily CF61_RS18045 PF02560 Cyanate lyase C-terminal domain CF61_RS18050 PF00484 Carbonic anhydrase CF61_RS18055 PF03466 LysR substrate binding domain CF61_RS18055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS18060 PF07969 Amidohydrolase family CF61_RS18065 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CF61_RS18070 PF00501 AMP-binding enzyme CF61_RS18070 PF13193 AMP-binding enzyme C-terminal domain CF61_RS18070 PF16177 Acetyl-coenzyme A synthetase N-terminus CF61_RS18075 PF03972 MmgE/PrpD family CF61_RS18080 PF00285 Citrate synthase, C-terminal domain CF61_RS18090 PF02954 Bacterial regulatory protein, Fis family CF61_RS18090 PF06506 Propionate catabolism activator CF61_RS18090 PF00158 Sigma-54 interaction domain CF61_RS18095 PF07338 Protein of unknown function (DUF1471) CF61_RS18100 PF01810 LysE type translocator CF61_RS18115 PF00107 Zinc-binding dehydrogenase CF61_RS18115 PF08240 Alcohol dehydrogenase GroES-like domain CF61_RS18120 PF07969 Amidohydrolase family CF61_RS18125 PF00696 Amino acid kinase family CF61_RS18135 PF06545 Protein of unknown function (DUF1116) CF61_RS18140 PF02629 CoA binding domain CF61_RS18140 PF00549 CoA-ligase CF61_RS18145 PF11392 Protein of unknown function (DUF2877) CF61_RS18150 PF12796 Ankyrin repeats (3 copies) CF61_RS18155 PF06496 Protein of unknown function (DUF1097) CF61_RS18160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS18160 PF03466 LysR substrate binding domain CF61_RS18165 PF00563 EAL domain CF61_RS18165 PF00196 Bacterial regulatory proteins, luxR family CF61_RS18175 PF02028 BCCT, betaine/carnitine/choline family transporter CF61_RS18180 PF00440 Bacterial regulatory proteins, tetR family CF61_RS18180 PF13977 BetI-type transcriptional repressor, C-terminal CF61_RS18185 PF00171 Aldehyde dehydrogenase family CF61_RS18190 PF00732 GMC oxidoreductase CF61_RS18190 PF05199 GMC oxidoreductase CF61_RS18205 PF02589 LUD domain CF61_RS18210 PF11870 Domain of unknown function (DUF3390) CF61_RS18210 PF13183 4Fe-4S dicluster domain CF61_RS18210 PF02589 LUD domain CF61_RS18215 PF02754 Cysteine-rich domain CF61_RS18220 PF12852 Cupin CF61_RS18220 PF12833 Helix-turn-helix domain CF61_RS18225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CF61_RS18225 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF61_RS18230 PF07338 Protein of unknown function (DUF1471) CF61_RS18235 PF04224 Protein of unknown function, DUF417 CF61_RS18240 PF12833 Helix-turn-helix domain CF61_RS18245 PF11924 Inverse autotransporter, beta-domain CF61_RS18255 PF01197 Ribosomal protein L31 CF61_RS18260 PF00444 Ribosomal protein L36 CF61_RS18270 PF00196 Bacterial regulatory proteins, luxR family CF61_RS18275 PF16449 Fimbrillin MatB CF61_RS18280 PF18649 EcpB C-terminal domain CF61_RS18285 PF15976 CS1-pili formation C-terminal CF61_RS18285 PF16967 E-set like domain CF61_RS18300 PF03692 Putative zinc- or iron-chelating domain CF61_RS18305 PF07274 Protein of unknown function (DUF1440) CF61_RS18310 PF01799 [2Fe-2S] binding domain CF61_RS18310 PF00111 2Fe-2S iron-sulfur cluster binding domain CF61_RS18315 PF00941 FAD binding domain in molybdopterin dehydrogenase CF61_RS18315 PF03450 CO dehydrogenase flavoprotein C-terminal domain CF61_RS18320 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CF61_RS18320 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CF61_RS18325 PF02625 XdhC and CoxI family CF61_RS18325 PF13478 XdhC Rossmann domain CF61_RS18330 PF03466 LysR substrate binding domain CF61_RS18345 PF03400 IS1 transposase CF61_RS18360 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CF61_RS18370 PF03354 Phage Terminase CF61_RS18385 PF06291 Bor protein CF61_RS18390 PF03245 Bacteriophage Rz lysis protein CF61_RS18405 PF01555 DNA methylase CF61_RS18420 PF06530 Phage antitermination protein Q CF61_RS18425 PF06147 Protein of unknown function (DUF968) CF61_RS18440 PF01726 LexA DNA binding domain CF61_RS18440 PF00717 Peptidase S24-like CF61_RS18445 PF06069 PerC transcriptional activator CF61_RS18470 PF00717 Peptidase S24-like CF61_RS18470 PF01381 Helix-turn-helix CF61_RS18490 PF10065 Uncharacterized conserved protein (DUF2303) CF61_RS18510 PF00589 Phage integrase family CF61_RS18520 PF00171 Aldehyde dehydrogenase family CF61_RS18525 PF00696 Amino acid kinase family CF61_RS18525 PF01472 PUA domain CF61_RS18530 PF00267 Gram-negative porin CF61_RS18535 PF07417 Sigma factor-binding transcriptional regulator Crl CF61_RS18540 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) CF61_RS18545 PF00156 Phosphoribosyl transferase domain CF61_RS18550 PF01546 Peptidase family M20/M25/M40 CF61_RS18550 PF07687 Peptidase dimerisation domain CF61_RS18555 PF00472 RF-1 domain CF61_RS18565 PF13673 Acetyltransferase (GNAT) domain CF61_RS18570 PF13957 Toxin YafO, type II toxin-antitoxin system CF61_RS18585 PF00691 OmpA family CF61_RS18585 PF13677 Membrane MotB of proton-channel complex MotA/MotB CF61_RS18590 PF01618 MotA/TolQ/ExbB proton channel family CF61_RS18595 PF04545 Sigma-70, region 4 CF61_RS18595 PF04542 Sigma-70 region 2 CF61_RS18620 PF07196 Flagellin hook IN motif CF61_RS18620 PF07195 Flagellar hook-associated protein 2 C-terminus CF61_RS18620 PF02465 Flagellar hook-associated protein 2 N-terminus CF61_RS18625 PF00700 Bacterial flagellin C-terminal helical region CF61_RS18625 PF00669 Bacterial flagellin N-terminal helical region CF61_RS18640 PF00669 Bacterial flagellin N-terminal helical region CF61_RS18650 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CF61_RS18650 PF10135 Rod binding protein CF61_RS18655 PF02119 Flagellar P-ring protein CF61_RS18660 PF02107 Flagellar L-ring protein CF61_RS18665 PF00460 Flagella basal body rod protein CF61_RS18665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CF61_RS18670 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CF61_RS18670 PF00460 Flagella basal body rod protein CF61_RS18675 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CF61_RS18675 PF07559 Flagellar basal body protein FlaE CF61_RS18685 PF00460 Flagella basal body rod protein CF61_RS18685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CF61_RS18690 PF00460 Flagella basal body rod protein CF61_RS18720 PF01467 Cytidylyltransferase-like CF61_RS18730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CF61_RS18730 PF18269 T3SS EscN ATPase C-terminal domain CF61_RS18740 PF14841 FliG middle domain CF61_RS18740 PF01706 FliG C-terminal domain CF61_RS18740 PF14842 FliG N-terminal domain CF61_RS18745 PF08345 Flagellar M-ring protein C-terminal CF61_RS18745 PF01514 Secretory protein of YscJ/FliF family CF61_RS18750 PF02049 Flagellar hook-basal body complex protein FliE CF61_RS18755 PF00072 Response regulator receiver domain CF61_RS18755 PF02954 Bacterial regulatory protein, Fis family CF61_RS18755 PF00158 Sigma-54 interaction domain CF61_RS18765 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CF61_RS18770 PF00813 FliP family CF61_RS18775 PF01313 Bacterial export proteins, family 3 CF61_RS18780 PF01311 Bacterial export proteins, family 1 CF61_RS18785 PF01312 FlhB HrpN YscU SpaS Family CF61_RS18790 PF00771 FHIPEP family CF61_RS18800 PF00877 NlpC/P60 family CF61_RS18805 PF03734 L,D-transpeptidase catalytic domain CF61_RS18810 PF13230 Glutamine amidotransferases class-II CF61_RS18815 PF13580 SIS domain CF61_RS18820 PF02770 Acyl-CoA dehydrogenase, middle domain CF61_RS18820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CF61_RS18820 PF09317 Domain of unknown function (DUF1974) CF61_RS18820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CF61_RS18830 PF00795 Carbon-nitrogen hydrolase CF61_RS18835 PF01609 Transposase DDE domain CF61_RS18835 PF13808 DDE_Tnp_1-associated CF61_RS18845 PF14220 Domain of unknown function (DUF4329) CF61_RS18845 PF03527 RHS protein CF61_RS18845 PF05593 RHS Repeat CF61_RS18860 PF05638 Type VI secretion system effector, Hcp CF61_RS18885 PF00929 Exonuclease CF61_RS18890 PF00075 RNase H CF61_RS18895 PF08241 Methyltransferase domain CF61_RS18900 PF00753 Metallo-beta-lactamase superfamily CF61_RS18900 PF16123 Hydroxyacylglutathione hydrolase C-terminus CF61_RS18905 PF01476 LysM domain CF61_RS18905 PF01464 Transglycosylase SLT domain CF61_RS18910 PF08241 Methyltransferase domain CF61_RS18915 PF03372 Endonuclease/Exonuclease/phosphatase family CF61_RS18920 PF03466 LysR substrate binding domain CF61_RS18920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS18925 PF00248 Aldo/keto reductase family CF61_RS18955 PF03180 NLPA lipoprotein CF61_RS18960 PF16358 RcsF lipoprotein CF61_RS18965 PF01980 tRNA-methyltransferase O CF61_RS18965 PF18389 TrmO C-terminal domain CF61_RS18970 PF03129 Anticodon binding domain CF61_RS18970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CF61_RS18970 PF04073 Aminoacyl-tRNA editing domain CF61_RS18975 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CF61_RS18980 PF17185 NlpE C-terminal OB domain CF61_RS18980 PF04170 NlpE N-terminal domain CF61_RS18985 PF00472 RF-1 domain CF61_RS18990 PF07152 YaeQ protein CF61_RS18995 PF06786 Uncharacterised protein family (UPF0253) CF61_RS19000 PF07073 Modulator of Rho-dependent transcription termination (ROF) CF61_RS19005 PF11734 TilS substrate C-terminal domain CF61_RS19005 PF01171 PP-loop family CF61_RS19005 PF09179 TilS substrate binding domain CF61_RS19010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CF61_RS19015 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CF61_RS19015 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CF61_RS19015 PF01276 Orn/Lys/Arg decarboxylase, major domain CF61_RS19020 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CF61_RS19025 PF01336 OB-fold nucleic acid binding domain CF61_RS19025 PF07733 Bacterial DNA polymerase III alpha NTPase domain CF61_RS19025 PF02811 PHP domain CF61_RS19025 PF14579 Helix-hairpin-helix motif CF61_RS19025 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CF61_RS19030 PF01351 Ribonuclease HII CF61_RS19035 PF02684 Lipid-A-disaccharide synthetase CF61_RS19040 PF00132 Bacterial transferase hexapeptide (six repeats) CF61_RS19040 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CF61_RS19045 PF07977 FabA-like domain CF61_RS19050 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CF61_RS19050 PF00132 Bacterial transferase hexapeptide (six repeats) CF61_RS19055 PF03938 Outer membrane protein (OmpH-like) CF61_RS19060 PF01103 Surface antigen CF61_RS19060 PF07244 Surface antigen variable number repeat CF61_RS19065 PF02163 Peptidase family M50 CF61_RS19065 PF17820 PDZ domain CF61_RS19075 PF01255 Putative undecaprenyl diphosphate synthase CF61_RS19080 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CF61_RS19080 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CF61_RS19080 PF13288 DXP reductoisomerase C-terminal domain CF61_RS19085 PF01765 Ribosome recycling factor CF61_RS19090 PF00696 Amino acid kinase family CF61_RS19095 PF00889 Elongation factor TS CF61_RS19100 PF00318 Ribosomal protein S2 CF61_RS19105 PF00557 Metallopeptidase family M24 CF61_RS19110 PF01842 ACT domain CF61_RS19110 PF08335 GlnD PII-uridylyltransferase CF61_RS19110 PF01909 Nucleotidyltransferase domain CF61_RS19110 PF01966 HD domain CF61_RS19115 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CF61_RS19115 PF14602 Hexapeptide repeat of succinyl-transferase CF61_RS19115 PF00132 Bacterial transferase hexapeptide (six repeats) CF61_RS19120 PF00149 Calcineurin-like phosphoesterase CF61_RS19125 PF11944 Protein of unknown function (DUF3461) CF61_RS19130 PF05651 Putative sugar diacid recognition CF61_RS19130 PF13556 PucR C-terminal helix-turn-helix domain CF61_RS19130 PF17853 GGDEF-like domain CF61_RS19135 PF00595 PDZ domain CF61_RS19140 PF13286 Phosphohydrolase-associated domain CF61_RS19140 PF01966 HD domain CF61_RS19145 PF01048 Phosphorylase superfamily CF61_RS19150 PF01497 Periplasmic binding protein CF61_RS19155 PF03458 UPF0126 domain CF61_RS19160 PF01521 Iron-sulphur cluster biosynthesis CF61_RS19165 PF00654 Voltage gated chloride channel CF61_RS19170 PF00202 Aminotransferase class-III CF61_RS19175 PF01032 FecCD transport family CF61_RS19180 PF01497 Periplasmic binding protein CF61_RS19185 PF00005 ABC transporter CF61_RS19190 PF07715 TonB-dependent Receptor Plug Domain CF61_RS19190 PF00593 TonB dependent receptor CF61_RS19195 PF00912 Transglycosylase CF61_RS19195 PF00905 Penicillin binding protein transpeptidase domain CF61_RS19195 PF14814 Bifunctional transglycosylase second domain CF61_RS19195 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal CF61_RS19205 PF00270 DEAD/DEAH box helicase CF61_RS19205 PF04408 Helicase associated domain (HA2) CF61_RS19205 PF00271 Helicase conserved C-terminal domain CF61_RS19205 PF08482 ATP-dependent helicase C-terminal CF61_RS19210 PF02834 LigT like Phosphoesterase CF61_RS19215 PF17746 SfsA N-terminal OB domain CF61_RS19215 PF03749 Sugar fermentation stimulation protein RE domain CF61_RS19220 PF01258 Prokaryotic dksA/traR C4-type zinc finger CF61_RS19225 PF00749 tRNA synthetases class I (E and Q), catalytic domain CF61_RS19230 PF12627 Probable RNA and SrmB- binding site of polymerase A CF61_RS19230 PF12626 Polymerase A arginine-rich C-terminus CF61_RS19230 PF01743 Poly A polymerase head domain CF61_RS19235 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CF61_RS19240 PF03400 IS1 transposase CF61_RS19245 PF00419 Fimbrial protein CF61_RS19250 PF00419 Fimbrial protein CF61_RS19265 PF02548 Ketopantoate hydroxymethyltransferase CF61_RS19270 PF02569 Pantoate-beta-alanine ligase CF61_RS19275 PF04754 Putative transposase, YhgA-like CF61_RS19280 PF02261 Aspartate decarboxylase CF61_RS19285 PF01522 Polysaccharide deacetylase CF61_RS19290 PF03610 PTS system fructose IIA component CF61_RS19295 PF01061 ABC-2 type transporter CF61_RS19300 PF00005 ABC transporter CF61_RS19305 PF00484 Carbonic anhydrase CF61_RS19310 PF00156 Phosphoribosyl transferase domain CF61_RS19315 PF01011 PQQ enzyme repeat CF61_RS19320 PF07731 Multicopper oxidase CF61_RS19320 PF07732 Multicopper oxidase CF61_RS19320 PF00394 Multicopper oxidase CF61_RS19325 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) CF61_RS19330 PF17284 Spermidine synthase tetramerisation domain CF61_RS19335 PF02675 S-adenosylmethionine decarboxylase CF61_RS19340 PF06062 Uncharacterised protein family (UPF0231) CF61_RS19345 PF00330 Aconitase family (aconitate hydratase) CF61_RS19345 PF06434 Aconitate hydratase 2 N-terminus CF61_RS19345 PF11791 Aconitate B N-terminal domain CF61_RS19350 PF11737 Protein of unknown function (DUF3300) CF61_RS19355 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF61_RS19355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CF61_RS19360 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CF61_RS19360 PF00364 Biotin-requiring enzyme CF61_RS19360 PF02817 e3 binding domain CF61_RS19365 PF00456 Transketolase, thiamine diphosphate binding domain CF61_RS19365 PF17831 Pyruvate dehydrogenase E1 component middle domain CF61_RS19370 PF00392 Bacterial regulatory proteins, gntR family CF61_RS19370 PF07729 FCD domain CF61_RS19375 PF00324 Amino acid permease CF61_RS19380 PF17113 Regulatory signalling modulator protein AmpE CF61_RS19385 PF01510 N-acetylmuramoyl-L-alanine amidase CF61_RS19390 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CF61_RS19390 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CF61_RS19400 PF07963 Prokaryotic N-terminal methylation motif CF61_RS19405 PF00437 Type II/IV secretion system protein CF61_RS19405 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CF61_RS19410 PF00482 Type II secretion system (T2SS), protein F CF61_RS19415 PF00478 IMP dehydrogenase / GMP reductase domain CF61_RS19420 PF01121 Dephospho-CoA kinase CF61_RS19425 PF07072 Cell division protein CF61_RS19430 PF03884 DNA gyrase inhibitor YacG CF61_RS19440 PF00293 NUDIX domain CF61_RS19445 PF07516 SecA Wing and Scaffold domain CF61_RS19445 PF01043 SecA preprotein cross-linking domain CF61_RS19445 PF07517 SecA DEAD-like domain CF61_RS19445 PF02810 SEC-C motif CF61_RS19450 PF06558 Secretion monitor precursor protein (SecM) CF61_RS19455 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CF61_RS19460 PF00091 Tubulin/FtsZ family, GTPase domain CF61_RS19460 PF12327 FtsZ family, C-terminal domain CF61_RS19465 PF02491 SHS2 domain inserted in FTSA CF61_RS19470 PF08478 POTRA domain, FtsQ-type CF61_RS19470 PF03799 Cell division protein FtsQ CF61_RS19475 PF07478 D-ala D-ala ligase C-terminus CF61_RS19475 PF01820 D-ala D-ala ligase N-terminus CF61_RS19480 PF01225 Mur ligase family, catalytic domain CF61_RS19480 PF02875 Mur ligase family, glutamate ligase domain CF61_RS19480 PF08245 Mur ligase middle domain CF61_RS19485 PF03033 Glycosyltransferase family 28 N-terminal domain CF61_RS19485 PF04101 Glycosyltransferase family 28 C-terminal domain CF61_RS19490 PF01098 Cell cycle protein CF61_RS19495 PF02875 Mur ligase family, glutamate ligase domain CF61_RS19495 PF08245 Mur ligase middle domain CF61_RS19500 PF00953 Glycosyl transferase family 4 CF61_RS19500 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CF61_RS19505 PF01225 Mur ligase family, catalytic domain CF61_RS19505 PF02875 Mur ligase family, glutamate ligase domain CF61_RS19505 PF08245 Mur ligase middle domain CF61_RS19510 PF02875 Mur ligase family, glutamate ligase domain CF61_RS19510 PF08245 Mur ligase middle domain CF61_RS19510 PF01225 Mur ligase family, catalytic domain CF61_RS19515 PF03717 Penicillin-binding Protein dimerisation domain CF61_RS19515 PF00905 Penicillin binding protein transpeptidase domain CF61_RS19520 PF04999 Cell division protein FtsL CF61_RS19525 PF01795 MraW methylase family CF61_RS19530 PF02381 MraZ protein, putative antitoxin-like CF61_RS19535 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CF61_RS19535 PF00356 Bacterial regulatory proteins, lacI family CF61_RS19545 PF10369 Small subunit of acetolactate synthase CF61_RS19550 PF00205 Thiamine pyrophosphate enzyme, central domain CF61_RS19550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CF61_RS19550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CF61_RS19555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS19555 PF03466 LysR substrate binding domain CF61_RS19560 PF08054 Leucine operon leader peptide CF61_RS19565 PF00682 HMGL-like CF61_RS19565 PF08502 LeuA allosteric (dimerisation) domain CF61_RS19570 PF00180 Isocitrate/isopropylmalate dehydrogenase CF61_RS19575 PF00330 Aconitase family (aconitate hydratase) CF61_RS19580 PF00694 Aconitase C-terminal domain CF61_RS19585 PF07690 Major Facilitator Superfamily CF61_RS19595 PF12793 Sugar transport-related sRNA regulator N-term CF61_RS19595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CF61_RS19605 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS19610 PF00005 ABC transporter CF61_RS19615 PF09335 SNARE associated Golgi protein CF61_RS19620 PF02311 AraC-like ligand binding domain CF61_RS19620 PF12833 Helix-turn-helix domain CF61_RS19625 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CF61_RS19630 PF02610 L-arabinose isomerase CF61_RS19630 PF11762 L-arabinose isomerase C-terminal domain CF61_RS19635 PF00596 Class II Aldolase and Adducin N-terminal domain CF61_RS19640 PF00136 DNA polymerase family B CF61_RS19640 PF03104 DNA polymerase family B, exonuclease domain CF61_RS19645 PF18337 RapA N-terminal Tudor like domain CF61_RS19645 PF00271 Helicase conserved C-terminal domain CF61_RS19645 PF00176 SNF2 family N-terminal domain CF61_RS19645 PF18339 RapA N-terminal Tudor like domain 1 CF61_RS19645 PF12137 RNA polymerase recycling family C-terminal CF61_RS19650 PF00849 RNA pseudouridylate synthase CF61_RS19655 PF05099 Tellurite resistance protein TerB CF61_RS19655 PF00226 DnaJ domain CF61_RS19660 PF04453 LPS transport system D CF61_RS19660 PF03968 OstA-like protein CF61_RS19665 PF00639 PPIC-type PPIASE domain CF61_RS19665 PF09312 SurA N-terminal domain CF61_RS19670 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CF61_RS19675 PF00398 Ribosomal RNA adenine dimethylase CF61_RS19680 PF04379 ApaG domain CF61_RS19685 PF00149 Calcineurin-like phosphoesterase CF61_RS19690 PF00186 Dihydrofolate reductase CF61_RS19695 PF02254 TrkA-N domain CF61_RS19695 PF00999 Sodium/hydrogen exchanger family CF61_RS19700 PF02525 Flavodoxin-like fold CF61_RS19705 PF00083 Sugar (and other) transporter CF61_RS19715 PF01494 FAD binding domain CF61_RS19720 PF00766 Electron transfer flavoprotein FAD-binding domain CF61_RS19720 PF01012 Electron transfer flavoprotein domain CF61_RS19725 PF01012 Electron transfer flavoprotein domain CF61_RS19730 PF12759 InsA C-terminal domain CF61_RS19730 PF03811 InsA N-terminal domain CF61_RS19735 PF03400 IS1 transposase CF61_RS19740 PF01012 Electron transfer flavoprotein domain CF61_RS19750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CF61_RS19750 PF02770 Acyl-CoA dehydrogenase, middle domain CF61_RS19750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CF61_RS19755 PF02515 CoA-transferase family III CF61_RS19760 PF13193 AMP-binding enzyme C-terminal domain CF61_RS19760 PF00501 AMP-binding enzyme CF61_RS19765 PF00378 Enoyl-CoA hydratase/isomerase CF61_RS19770 PF00132 Bacterial transferase hexapeptide (six repeats) CF61_RS19775 PF07180 CaiF/GrlA transcriptional regulator CF61_RS19785 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CF61_RS19785 PF02142 MGS-like domain CF61_RS19785 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CF61_RS19790 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CF61_RS19790 PF00117 Glutamine amidotransferase class-I CF61_RS19805 PF01113 Dihydrodipicolinate reductase, N-terminus CF61_RS19805 PF05173 Dihydrodipicolinate reductase, C-terminus CF61_RS19810 PF01156 Inosine-uridine preferring nucleoside hydrolase CF61_RS19815 PF02401 LytB protein CF61_RS19820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CF61_RS19825 PF01252 Signal peptidase (SPase) II CF61_RS19830 PF08264 Anticodon-binding domain of tRNA CF61_RS19830 PF00133 tRNA synthetases class I (I, L, M and V) CF61_RS19830 PF06827 Zinc finger found in FPG and IleRS CF61_RS19835 PF01687 Riboflavin kinase CF61_RS19835 PF06574 FAD synthetase CF61_RS19840 PF10837 Protein of unknown function (DUF2575) CF61_RS19845 PF01649 Ribosomal protein S20 CF61_RS19855 PF03400 IS1 transposase CF61_RS19860 PF03400 IS1 transposase CF61_RS19865 PF13954 PapC N-terminal domain CF61_RS19865 PF13953 PapC C-terminal domain CF61_RS19865 PF00577 Outer membrane usher protein CF61_RS19875 PF03466 LysR substrate binding domain CF61_RS19875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS19880 PF06965 Na+/H+ antiporter 1 CF61_RS19890 PF13333 Integrase core domain CF61_RS19890 PF00665 Integrase core domain CF61_RS19890 PF13276 HTH-like domain CF61_RS19895 PF01848 Hok/gef family CF61_RS19900 PF01609 Transposase DDE domain CF61_RS19905 PF01556 DnaJ C terminal domain CF61_RS19905 PF00226 DnaJ domain CF61_RS19905 PF00684 DnaJ central domain CF61_RS19910 PF00012 Hsp70 protein CF61_RS19915 PF10807 Protein of unknown function (DUF2541) CF61_RS19920 PF13099 Domain of unknown function (DUF3944) CF61_RS19920 PF03981 Ubiquinol-cytochrome C chaperone CF61_RS19925 PF01184 GPR1/FUN34/yaaH family CF61_RS19930 PF00994 Probable molybdopterin binding domain CF61_RS19935 PF00923 Transaldolase/Fructose-6-phosphate aldolase CF61_RS19940 PF01235 Sodium:alanine symporter family CF61_RS19945 PF03883 Peroxide stress protein YaaA CF61_RS19950 PF10697 Protein of unknown function (DUF2502) CF61_RS19960 PF00291 Pyridoxal-phosphate dependent enzyme CF61_RS19960 PF14821 Threonine synthase N terminus CF61_RS19965 PF00288 GHMP kinases N terminal domain CF61_RS19965 PF08544 GHMP kinases C terminal CF61_RS19970 PF00742 Homoserine dehydrogenase CF61_RS19970 PF03447 Homoserine dehydrogenase, NAD binding domain CF61_RS19970 PF13840 ACT domain CF61_RS19970 PF01842 ACT domain CF61_RS19970 PF00696 Amino acid kinase family CF61_RS19975 PF08254 Threonine leader peptide CF61_RS19980 PF00588 SpoU rRNA Methylase family CF61_RS19990 PF00486 Transcriptional regulatory protein, C terminal CF61_RS19990 PF00072 Response regulator receiver domain CF61_RS20000 PF00512 His Kinase A (phospho-acceptor) domain CF61_RS20000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS20000 PF00672 HAMP domain CF61_RS20005 PF00072 Response regulator receiver domain CF61_RS20005 PF00486 Transcriptional regulatory protein, C terminal CF61_RS20010 PF05981 CreA protein CF61_RS20015 PF06445 GyrI-like small molecule binding domain CF61_RS20015 PF12833 Helix-turn-helix domain CF61_RS20020 PF00300 Histidine phosphatase superfamily (branch 1) CF61_RS20025 PF01931 Protein of unknown function DUF84 CF61_RS20030 PF01371 Trp repressor protein CF61_RS20035 PF14718 Soluble lytic murein transglycosylase L domain CF61_RS20035 PF01464 Transglycosylase SLT domain CF61_RS20040 PF00005 ABC transporter CF61_RS20040 PF12848 ABC transporter CF61_RS20050 PF13521 AAA domain CF61_RS20050 PF01381 Helix-turn-helix CF61_RS20055 PF18073 Rubredoxin metal binding domain CF61_RS20060 PF18429 Domain of unknown function (DUF5609) CF61_RS20065 PF10144 Bacterial virulence factor haemolysin CF61_RS20070 PF10437 Bacterial lipoate protein ligase C-terminus CF61_RS20070 PF03099 Biotin/lipoate A/B protein ligase family CF61_RS20080 PF01048 Phosphorylase superfamily CF61_RS20085 PF01676 Metalloenzyme superfamily CF61_RS20090 PF02885 Glycosyl transferase family, helical bundle domain CF61_RS20090 PF00591 Glycosyl transferase family, a/b domain CF61_RS20090 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CF61_RS20095 PF01791 DeoC/LacD family aldolase CF61_RS20105 PF11230 Protein of unknown function (DUF3029) CF61_RS20110 PF04055 Radical SAM superfamily CF61_RS20115 PF01026 TatD related DNase CF61_RS20120 PF01734 Patatin-like phospholipase CF61_RS20125 PF07043 Protein of unknown function (DUF1328) CF61_RS20145 PF00593 TonB dependent receptor CF61_RS20145 PF07660 Secretin and TonB N terminus short domain CF61_RS20145 PF07715 TonB-dependent Receptor Plug Domain CF61_RS20150 PF01497 Periplasmic binding protein CF61_RS20155 PF01032 FecCD transport family CF61_RS20160 PF01032 FecCD transport family CF61_RS20165 PF00005 ABC transporter CF61_RS20175 PF00665 Integrase core domain CF61_RS20185 PF05717 IS66 Orf2 like protein CF61_RS20190 PF03050 Transposase IS66 family CF61_RS20190 PF13817 IS66 C-terminal element CF61_RS20190 PF13005 zinc-finger binding domain of transposase IS66 CF61_RS20190 PF13007 Transposase C of IS166 homeodomain CF61_RS20195 PF13936 Helix-turn-helix domain CF61_RS20195 PF00665 Integrase core domain CF61_RS20205 PF03400 IS1 transposase CF61_RS20220 PF00589 Phage integrase family CF61_RS20225 PF01051 Initiator Replication protein CF61_RS20245 PF03400 IS1 transposase CF61_RS20250 PF08402 TOBE domain CF61_RS20250 PF00005 ABC transporter CF61_RS20255 PF02574 Homocysteine S-methyltransferase CF61_RS20260 PF00324 Amino acid permease CF61_RS20265 PF05598 Transposase domain (DUF772) CF61_RS20265 PF01609 Transposase DDE domain CF61_RS20290 PF02384 N-6 DNA Methylase CF61_RS20290 PF12161 HsdM N-terminal domain CF61_RS20295 PF01420 Type I restriction modification DNA specificity domain CF61_RS20300 PF12008 Type I restriction and modification enzyme - subunit R C terminal CF61_RS20300 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CF61_RS20300 PF18766 SWI2/SNF2 ATPase CF61_RS20305 PF03400 IS1 transposase CF61_RS20325 PF01850 PIN domain CF61_RS20330 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CF61_RS20345 PF01527 Transposase CF61_RS20370 PF13936 Helix-turn-helix domain CF61_RS20370 PF00665 Integrase core domain CF61_RS20375 PF00665 Integrase core domain CF61_RS20375 PF13333 Integrase core domain CF61_RS20375 PF13276 HTH-like domain CF61_RS20385 PF03400 IS1 transposase CF61_RS20390 PF03811 InsA N-terminal domain CF61_RS20390 PF12759 InsA C-terminal domain CF61_RS20415 PF00589 Phage integrase family CF61_RS20445 PF03400 IS1 transposase CF61_RS20450 PF12759 InsA C-terminal domain CF61_RS20450 PF03811 InsA N-terminal domain CF61_RS20455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CF61_RS20455 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF61_RS20460 PF13610 DDE domain CF61_RS20470 PF00589 Phage integrase family CF61_RS20480 PF10609 NUBPL iron-transfer P-loop NTPase CF61_RS20485 PF06406 StbA protein CF61_RS20495 PF11799 impB/mucB/samB family C-terminal domain CF61_RS20495 PF00817 impB/mucB/samB family CF61_RS20495 PF13438 Domain of unknown function (DUF4113) CF61_RS20500 PF00717 Peptidase S24-like CF61_RS20505 PF06183 DinI-like family CF61_RS20510 PF06924 Protein of unknown function (DUF1281) CF61_RS20520 PF01555 DNA methylase CF61_RS20530 PF07128 Protein of unknown function (DUF1380) CF61_RS20540 PF01609 Transposase DDE domain CF61_RS20545 PF07339 Protein of unknown function (DUF1472) CF61_RS20550 PF03230 Antirestriction protein CF61_RS20555 PF07128 Protein of unknown function (DUF1380) CF61_RS20595 PF00436 Single-strand binding protein family CF61_RS20600 PF06006 Bacterial protein of unknown function (DUF905) CF61_RS20605 PF02195 ParB-like nuclease domain CF61_RS20610 PF06290 Plasmid SOS inhibition protein (PsiB) CF61_RS20615 PF06952 PsiA protein CF61_RS20625 PF01848 Hok/gef family CF61_RS20645 PF06067 Domain of unknown function (DUF932) CF61_RS20650 PF01464 Transglycosylase SLT domain CF61_RS20655 PF05261 TraM protein, DNA-binding CF61_RS20660 PF00989 PAS fold CF61_RS20665 PF05509 TraY domain CF61_RS20670 PF05513 TraA CF61_RS20675 PF07178 TraL protein CF61_RS20680 PF05309 TraE protein CF61_RS20685 PF06586 TraK protein CF61_RS20690 PF03743 Bacterial conjugation TrbI-like protein CF61_RS20695 PF07296 TraP protein CF61_RS20700 PF10894 Protein of unknown function (DUF2689) CF61_RS20710 PF09676 Type IV conjugative transfer system lipoprotein (TraV) CF61_RS20720 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer CF61_RS20725 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) CF61_RS20730 PF12477 Sex factor F TraW protein N terminal CF61_RS20735 PF06834 TraU protein CF61_RS20740 PF09673 Type-F conjugative transfer system pilin assembly protein CF61_RS20745 PF06986 Type-1V conjugative transfer system mating pair stabilisation CF61_RS20750 PF11100 Conjugal transfer protein TrbE CF61_RS20755 PF13728 F plasmid transfer operon protein CF61_RS20765 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) CF61_RS20770 PF13728 F plasmid transfer operon protein CF61_RS20780 PF06122 Conjugative relaxosome accessory transposon protein CF61_RS20785 PF07916 TraG-like protein, N-terminal region CF61_RS20795 PF05818 Enterobacterial TraT complement resistance protein CF61_RS20800 PF12615 F sex factor protein N terminal CF61_RS20800 PF10412 Type IV secretion-system coupling protein DNA-binding domain CF61_RS20805 PF08751 TrwC relaxase CF61_RS20805 PF18340 DNA relaxase TraI 2B/2B-like domain CF61_RS20805 PF18272 single-stranded DNA binding TraI N-terminal subdomain CF61_RS20805 PF07057 DNA helicase TraI CF61_RS20810 PF05857 TraX protein CF61_RS20815 PF12602 Fertility inhibition protein N terminal CF61_RS20815 PF04352 ProQ/FINO family CF61_RS20825 PF01848 Hok/gef family CF61_RS20830 PF10723 Replication regulatory protein RepB CF61_RS20835 PF02387 IncFII RepA protein family CF61_RS20840 PF02517 CPBP intramembrane metalloprotease CF61_RS20850 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CF61_RS20860 PF03400 IS1 transposase CF61_RS20865 PF00376 MerR family regulatory protein CF61_RS20865 PF09278 MerR, DNA binding CF61_RS20870 PF02411 MerT mercuric transport protein CF61_RS20875 PF00403 Heavy-metal-associated domain CF61_RS20880 PF03203 MerC mercury resistance protein CF61_RS20885 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF61_RS20885 PF00403 Heavy-metal-associated domain CF61_RS20885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CF61_RS20890 PF13411 MerR HTH family regulatory protein CF61_RS20895 PF05052 MerE protein CF61_RS20900 PF00990 Diguanylate cyclase, GGDEF domain CF61_RS20900 PF13188 PAS domain CF61_RS20900 PF03707 Bacterial signalling protein N terminal repeat CF61_RS20900 PF00563 EAL domain CF61_RS20910 PF13610 DDE domain CF61_RS20925 PF00809 Pterin binding enzyme CF61_RS20930 PF01636 Phosphotransferase enzyme family CF61_RS20935 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase CF61_RS20940 PF13610 DDE domain CF61_RS20945 PF03400 IS1 transposase CF61_RS20950 PF01636 Phosphotransferase enzyme family CF61_RS20955 PF13610 DDE domain CF61_RS20965 PF00239 Resolvase, N terminal domain CF61_RS20965 PF02796 Helix-turn-helix domain of resolvase CF61_RS20970 PF13610 DDE domain CF61_RS20975 PF02796 Helix-turn-helix domain of resolvase CF61_RS20975 PF00239 Resolvase, N terminal domain CF61_RS20985 PF00440 Bacterial regulatory proteins, tetR family CF61_RS20985 PF02909 Tetracyclin repressor-like, C-terminal domain CF61_RS20990 PF07690 Major Facilitator Superfamily CF61_RS20995 PF00892 EamA-like transporter family CF61_RS21005 PF01526 Tn3 transposase DDE domain CF61_RS21005 PF13700 Domain of unknown function (DUF4158) CF61_RS21010 PF08281 Sigma-70, region 4 CF61_RS21010 PF04542 Sigma-70 region 2 CF61_RS21015 PF16220 Domain of unknown function (DUF4880) CF61_RS21015 PF04773 FecR protein CF61_RS21020 PF00593 TonB dependent receptor CF61_RS21020 PF07715 TonB-dependent Receptor Plug Domain CF61_RS21020 PF07660 Secretin and TonB N terminus short domain CF61_RS21025 PF01497 Periplasmic binding protein CF61_RS21035 PF13419 Haloacid dehalogenase-like hydrolase CF61_RS21040 PF00583 Acetyltransferase (GNAT) family CF61_RS21045 PF03603 DNA polymerase III psi subunit CF61_RS21050 PF08468 Methyltransferase small domain N-terminal CF61_RS21050 PF05175 Methyltransferase small domain CF61_RS21070 PF07256 Protein of unknown function (DUF1435) CF61_RS21075 PF11575 FhuF 2Fe-2S C-terminal domain CF61_RS21075 PF06276 Ferric iron reductase FhuF-like transporter CF61_RS21080 PF00196 Bacterial regulatory proteins, luxR family CF61_RS21085 PF00196 Bacterial regulatory proteins, luxR family CF61_RS21090 PF06738 Putative threonine/serine exporter CF61_RS21095 PF12821 Threonine/Serine exporter, ThrE CF61_RS21100 PF17948 DnaT DNA-binding domain CF61_RS21105 PF01695 IstB-like ATP binding protein CF61_RS21110 PF10696 Protein of unknown function (DUF2501) CF61_RS21115 PF00884 Sulfatase CF61_RS21120 PF00107 Zinc-binding dehydrogenase CF61_RS21120 PF08240 Alcohol dehydrogenase GroES-like domain CF61_RS21125 PF00392 Bacterial regulatory proteins, gntR family CF61_RS21125 PF07729 FCD domain CF61_RS21130 PF07690 Major Facilitator Superfamily CF61_RS21135 PF02203 Tar ligand binding domain homologue CF61_RS21135 PF00672 HAMP domain CF61_RS21135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CF61_RS21140 PF01047 MarR family CF61_RS21145 PF01557 Fumarylacetoacetate (FAA) hydrolase family CF61_RS21150 PF00171 Aldehyde dehydrogenase family CF61_RS21155 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CF61_RS21160 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase CF61_RS21165 PF01557 Fumarylacetoacetate (FAA) hydrolase family CF61_RS21170 PF03328 HpcH/HpaI aldolase/citrate lyase family CF61_RS21175 PF07690 Major Facilitator Superfamily CF61_RS21185 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CF61_RS21185 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CF61_RS21190 PF01613 Flavin reductase like domain CF61_RS21200 PF02554 Carbon starvation protein CstA CF61_RS21200 PF13722 5TM C-terminal transporter carbon starvation CstA CF61_RS21205 PF04328 Selenoprotein, putative CF61_RS21210 PF02492 CobW/HypB/UreG, nucleotide-binding domain CF61_RS21210 PF07683 Cobalamin synthesis protein cobW C-terminal domain CF61_RS21215 PF03400 IS1 transposase CF61_RS21220 PF07690 Major Facilitator Superfamily CF61_RS21225 PF04286 Protein of unknown function (DUF445) CF61_RS21235 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CF61_RS21240 PF01869 BadF/BadG/BcrA/BcrD ATPase family CF61_RS21245 PF11823 Protein of unknown function (DUF3343) CF61_RS21250 PF06977 SdiA-regulated CF61_RS21255 PF06779 Uncharacterised MFS-type transporter YbfB CF61_RS21260 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family CF61_RS21265 PF07670 Nucleoside recognition CF61_RS21270 PF07670 Nucleoside recognition CF61_RS21275 PF01979 Amidohydrolase family CF61_RS21280 PF03466 LysR substrate binding domain CF61_RS21280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS21285 PF04965 Gene 25-like lysozyme CF61_RS21300 PF10887 Protein of unknown function (DUF2686) CF61_RS21305 PF00392 Bacterial regulatory proteins, gntR family CF61_RS21305 PF07729 FCD domain CF61_RS21315 PF01232 Mannitol dehydrogenase Rossmann domain CF61_RS21315 PF08125 Mannitol dehydrogenase C-terminal domain CF61_RS21320 PF03786 D-mannonate dehydratase (UxuA) CF61_RS21330 PF02447 GntP family permease CF61_RS21335 PF00419 Fimbrial protein CF61_RS21335 PF09160 FimH, mannose binding CF61_RS21345 PF01527 Transposase CF61_RS21350 PF00665 Integrase core domain CF61_RS21350 PF13276 HTH-like domain CF61_RS21365 PF03400 IS1 transposase CF61_RS21370 PF08281 Sigma-70, region 4 CF61_RS21370 PF04542 Sigma-70 region 2 CF61_RS21375 PF16220 Domain of unknown function (DUF4880) CF61_RS21375 PF04773 FecR protein CF61_RS21380 PF07660 Secretin and TonB N terminus short domain CF61_RS21380 PF07715 TonB-dependent Receptor Plug Domain CF61_RS21380 PF00593 TonB dependent receptor CF61_RS21385 PF01497 Periplasmic binding protein CF61_RS21390 PF01032 FecCD transport family CF61_RS21395 PF01032 FecCD transport family CF61_RS21400 PF00005 ABC transporter CF61_RS21410 PF01527 Transposase CF61_RS21430 PF00107 Zinc-binding dehydrogenase CF61_RS21430 PF08240 Alcohol dehydrogenase GroES-like domain CF61_RS21435 PF05872 Bacterial protein of unknown function (DUF853) CF61_RS21440 PF03739 Lipopolysaccharide export system permease LptF/LptG CF61_RS21445 PF03739 Lipopolysaccharide export system permease LptF/LptG CF61_RS21450 PF02789 Cytosol aminopeptidase family, N-terminal domain CF61_RS21450 PF00883 Cytosol aminopeptidase family, catalytic domain CF61_RS21455 PF04364 DNA polymerase III chi subunit, HolC CF61_RS21460 PF10458 Valyl tRNA synthetase tRNA binding arm CF61_RS21460 PF00133 tRNA synthetases class I (I, L, M and V) CF61_RS21460 PF08264 Anticodon-binding domain of tRNA CF61_RS21465 PF05987 Bacterial protein of unknown function (DUF898) CF61_RS21470 PF00583 Acetyltransferase (GNAT) family CF61_RS21475 PF06877 Regulator of ribonuclease activity B CF61_RS21480 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CF61_RS21480 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CF61_RS21490 PF04074 YhcH/YjgK/YiaL CF61_RS21495 PF00440 Bacterial regulatory proteins, tetR family CF61_RS21505 PF01042 Endoribonuclease L-PSP CF61_RS21515 PF08052 PyrBI operon leader peptide CF61_RS21520 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CF61_RS21520 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CF61_RS21525 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CF61_RS21525 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CF61_RS21530 PF01042 Endoribonuclease L-PSP CF61_RS21535 PF00690 Cation transporter/ATPase, N-terminus CF61_RS21535 PF00689 Cation transporting ATPase, C-terminus CF61_RS21540 PF00356 Bacterial regulatory proteins, lacI family CF61_RS21545 PF00367 phosphotransferase system, EIIB CF61_RS21545 PF02378 Phosphotransferase system, EIIC CF61_RS21550 PF00128 Alpha amylase, catalytic domain CF61_RS21550 PF11941 Domain of unknown function (DUF3459) CF61_RS21555 PF03477 ATP cone domain CF61_RS21555 PF13597 Anaerobic ribonucleoside-triphosphate reductase CF61_RS21565 PF07361 Cytochrome b562 CF61_RS21570 PF01523 Putative modulator of DNA gyrase CF61_RS21575 PF04751 Protein of unknown function (DUF615) CF61_RS21580 PF01225 Mur ligase family, catalytic domain CF61_RS21580 PF08245 Mur ligase middle domain CF61_RS21580 PF02875 Mur ligase family, glutamate ligase domain CF61_RS21585 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CF61_RS21590 PF02653 Branched-chain amino acid transport system / permease component CF61_RS21595 PF02653 Branched-chain amino acid transport system / permease component CF61_RS21600 PF00005 ABC transporter CF61_RS21605 PF13407 Periplasmic binding protein domain CF61_RS21610 PF00719 Inorganic pyrophosphatase CF61_RS21615 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like CF61_RS21620 PF04357 TamB, inner membrane protein subunit of TAM complex CF61_RS21625 PF07244 Surface antigen variable number repeat CF61_RS21625 PF01103 Surface antigen CF61_RS21625 PF17243 POTRA domain TamA domain 1 CF61_RS21635 PF01625 Peptide methionine sulfoxide reductase CF61_RS21640 PF00571 CBS domain CF61_RS21640 PF03471 Transporter associated domain CF61_RS21640 PF01595 Cyclin M transmembrane N-terminal domain CF61_RS21645 PF06526 Protein of unknown function (DUF1107) CF61_RS21650 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CF61_RS21655 PF00459 Inositol monophosphatase family CF61_RS21660 PF02872 5'-nucleotidase, C-terminal domain CF61_RS21660 PF00149 Calcineurin-like phosphoesterase CF61_RS21665 PF01638 HxlR-like helix-turn-helix CF61_RS21670 PF05368 NmrA-like family CF61_RS21675 PF00892 EamA-like transporter family CF61_RS21680 PF01814 Hemerythrin HHE cation binding domain CF61_RS21680 PF04405 Domain of Unknown function (DUF542) CF61_RS21685 PF00324 Amino acid permease CF61_RS21690 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CF61_RS21690 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CF61_RS21695 PF08525 Opacity-associated protein A N-terminal motif CF61_RS21695 PF04225 Opacity-associated protein A LysM-like domain CF61_RS21700 PF17938 Tetracyclin repressor-like, C-terminal domain CF61_RS21715 PF00378 Enoyl-CoA hydratase/isomerase CF61_RS21720 PF01144 Coenzyme A transferase CF61_RS21725 PF02910 Fumarate reductase flavoprotein C-term CF61_RS21725 PF00890 FAD binding domain CF61_RS21730 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CF61_RS21735 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CF61_RS21740 PF03480 Bacterial extracellular solute-binding protein, family 7 CF61_RS21745 PF01281 Ribosomal protein L9, N-terminal domain CF61_RS21745 PF03948 Ribosomal protein L9, C-terminal domain CF61_RS21750 PF01084 Ribosomal protein S18 CF61_RS21755 PF00436 Single-strand binding protein family CF61_RS21760 PF01250 Ribosomal protein S6 CF61_RS21770 PF07338 Protein of unknown function (DUF1471) CF61_RS21775 PF00596 Class II Aldolase and Adducin N-terminal domain CF61_RS21785 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CF61_RS21790 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF61_RS21795 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF61_RS21800 PF03611 PTS system sugar-specific permease component CF61_RS21810 PF08220 DeoR-like helix-turn-helix domain CF61_RS21810 PF00455 DeoR C terminal sensor domain CF61_RS21815 PF00326 Prolyl oligopeptidase family CF61_RS21820 PF07338 Protein of unknown function (DUF1471) CF61_RS21825 PF07338 Protein of unknown function (DUF1471) CF61_RS21830 PF18158 Adaptive response protein AidB N-terminal domain CF61_RS21830 PF02770 Acyl-CoA dehydrogenase, middle domain CF61_RS21830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CF61_RS21835 PF03738 Glutathionylspermidine synthase preATP-grasp CF61_RS21840 PF06693 Protein of unknown function (DUF1190) CF61_RS21845 PF03994 Domain of Unknown Function (DUF350) CF61_RS21850 PF10679 Protein of unknown function (DUF2491) CF61_RS21855 PF04012 PspA/IM30 family CF61_RS21860 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) CF61_RS21865 PF00588 SpoU rRNA Methylase family CF61_RS21865 PF08032 RNA 2'-O ribose methyltransferase substrate binding CF61_RS21870 PF08206 Ribonuclease B OB domain CF61_RS21870 PF17876 Cold shock domain CF61_RS21870 PF08461 Ribonuclease R winged-helix domain CF61_RS21870 PF00575 S1 RNA binding domain CF61_RS21870 PF00773 RNB domain CF61_RS21875 PF02082 Transcriptional regulator CF61_RS21880 PF00709 Adenylosuccinate synthetase CF61_RS21885 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CF61_RS21890 PF01145 SPFH domain / Band 7 family CF61_RS21895 PF01145 SPFH domain / Band 7 family CF61_RS21895 PF12221 Bacterial membrane protein N terminal CF61_RS21900 PF16360 GTP-binding GTPase Middle Region CF61_RS21900 PF13167 GTP-binding GTPase N-terminal CF61_RS21900 PF01926 50S ribosome-binding GTPase CF61_RS21905 PF17209 Hfq protein CF61_RS21915 PF08676 MutL C terminal dimerisation domain CF61_RS21915 PF01119 DNA mismatch repair protein, C-terminal domain CF61_RS21920 PF01520 N-acetylmuramoyl-L-alanine amidase CF61_RS21925 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CF61_RS21930 PF03853 YjeF-related protein N-terminus CF61_RS21930 PF01256 Carbohydrate kinase CF61_RS21935 PF08331 Domain of unknown function (DUF1730) CF61_RS21955 PF00929 Exonuclease CF61_RS21960 PF03193 RsgA GTPase CF61_RS21965 PF02666 Phosphatidylserine decarboxylase CF61_RS21970 PF00924 Mechanosensitive ion channel CF61_RS21970 PF12795 Mechanosensitive ion channel porin domain CF61_RS21970 PF12794 Mechanosensitive ion channel inner membrane domain 1 CF61_RS21975 PF10840 Protein of unknown function (DUF2645) CF61_RS21985 PF13520 Amino acid permease CF61_RS21990 PF00152 tRNA synthetases class II (D, K and N) CF61_RS21995 PF02910 Fumarate reductase flavoprotein C-term CF61_RS21995 PF00890 FAD binding domain CF61_RS22000 PF13085 2Fe-2S iron-sulfur cluster binding domain CF61_RS22000 PF13183 4Fe-4S dicluster domain CF61_RS22005 PF02300 Fumarate reductase subunit C CF61_RS22010 PF02313 Fumarate reductase subunit D CF61_RS22015 PF00144 Beta-lactamase CF61_RS22020 PF08212 Lipocalin-like domain CF61_RS22025 PF00893 Small Multidrug Resistance protein CF61_RS22030 PF08085 Entericidin EcnA/B family CF61_RS22035 PF08085 Entericidin EcnA/B family CF61_RS22040 PF09285 Elongation factor P, C-terminal CF61_RS22040 PF01132 Elongation factor P (EF-P) OB domain CF61_RS22040 PF08207 Elongation factor P (EF-P) KOW-like domain CF61_RS22045 PF04055 Radical SAM superfamily CF61_RS22050 PF15922 YjeJ-like CF61_RS22055 PF13698 Domain of unknown function (DUF4156) CF61_RS22060 PF00118 TCP-1/cpn60 chaperonin family CF61_RS22065 PF00166 Chaperonin 10 Kd subunit CF61_RS22070 PF13520 Amino acid permease CF61_RS22075 PF04186 FxsA cytoplasmic membrane protein CF61_RS22080 PF00206 Lyase CF61_RS22080 PF10415 Fumarase C C-terminus CF61_RS22085 PF03605 Anaerobic c4-dicarboxylate membrane transporter CF61_RS22090 PF03091 CutA1 divalent ion tolerance protein CF61_RS22095 PF02683 Cytochrome C biogenesis protein transmembrane region CF61_RS22095 PF11412 Disulphide bond corrector protein DsbC CF61_RS22110 PF18500 CadC C-terminal domain 1 CF61_RS22110 PF00486 Transcriptional regulatory protein, C terminal CF61_RS22115 PF13520 Amino acid permease CF61_RS22120 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CF61_RS22120 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CF61_RS22120 PF01276 Orn/Lys/Arg decarboxylase, major domain CF61_RS22125 PF00854 POT family CF61_RS22130 PF01336 OB-fold nucleic acid binding domain CF61_RS22130 PF00152 tRNA synthetases class II (D, K and N) CF61_RS22135 PF10753 Toxin GhoT_OrtT CF61_RS22140 PF11080 Endoribonuclease GhoS CF61_RS22145 PF14542 GCN5-related N-acetyl-transferase CF61_RS22150 PF06902 Divergent 4Fe-4S mono-cluster CF61_RS22155 PF17203 Single cache domain 3 CF61_RS22155 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CF61_RS22155 PF00989 PAS fold CF61_RS22155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS22160 PF00072 Response regulator receiver domain CF61_RS22170 PF03605 Anaerobic c4-dicarboxylate membrane transporter CF61_RS22175 PF05681 Fumarate hydratase (Fumerase) CF61_RS22175 PF05683 Fumarase C-terminus CF61_RS22180 PF09997 Predicted membrane protein (DUF2238) CF61_RS22190 PF02056 Family 4 glycosyl hydrolase CF61_RS22190 PF11975 Family 4 glycosyl hydrolase C-terminal domain CF61_RS22200 PF12833 Helix-turn-helix domain CF61_RS22205 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CF61_RS22205 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CF61_RS22205 PF01276 Orn/Lys/Arg decarboxylase, major domain CF61_RS22210 PF12833 Helix-turn-helix domain CF61_RS22215 PF03400 IS1 transposase CF61_RS22220 PF13520 Amino acid permease CF61_RS22225 PF08019 Phosphoethanolamine transferase EptA/EptB CF61_RS22225 PF00884 Sulfatase CF61_RS22230 PF00072 Response regulator receiver domain CF61_RS22230 PF00486 Transcriptional regulatory protein, C terminal CF61_RS22235 PF00512 His Kinase A (phospho-acceptor) domain CF61_RS22235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS22245 PF00083 Sugar (and other) transporter CF61_RS22245 PF08946 Osmosensory transporter coiled coil CF61_RS22250 PF13990 YjcZ-like protein CF61_RS22255 PF00350 Dynamin family CF61_RS22260 PF08274 PhnA Zinc-Ribbon CF61_RS22260 PF03831 PhnA domain CF61_RS22265 PF06983 3-demethylubiquinone-9 3-methyltransferase CF61_RS22270 PF00005 ABC transporter CF61_RS22280 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS22285 PF00392 Bacterial regulatory proteins, gntR family CF61_RS22285 PF07702 UTRA domain CF61_RS22290 PF06754 Phosphonate metabolism protein PhnG CF61_RS22295 PF05845 Bacterial phosphonate metabolism protein (PhnH) CF61_RS22300 PF05861 Bacterial phosphonate metabolism protein (PhnI) CF61_RS22305 PF06007 Phosphonate metabolism protein PhnJ CF61_RS22310 PF00005 ABC transporter CF61_RS22315 PF00005 ABC transporter CF61_RS22320 PF07969 Amidohydrolase family CF61_RS22330 PF00583 Acetyltransferase (GNAT) family CF61_RS22335 PF12706 Beta-lactamase superfamily domain CF61_RS22345 PF02502 Ribose/Galactose Isomerase CF61_RS22350 PF01380 SIS domain CF61_RS22350 PF01418 Helix-turn-helix domain, rpiR family CF61_RS22355 PF13407 Periplasmic binding protein domain CF61_RS22360 PF00005 ABC transporter CF61_RS22365 PF02653 Branched-chain amino acid transport system / permease component CF61_RS22370 PF00834 Ribulose-phosphate 3 epimerase family CF61_RS22375 PF00480 ROK family CF61_RS22380 PF00753 Metallo-beta-lactamase superfamily CF61_RS22380 PF14863 Alkyl sulfatase dimerisation CF61_RS22380 PF14864 Alkyl sulfatase C-terminal CF61_RS22385 PF17090 Uncharacterised protein family CF61_RS22390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CF61_RS22390 PF00529 HlyD membrane-fusion protein of T1SS CF61_RS22395 PF04632 Fusaric acid resistance protein family CF61_RS22400 PF02321 Outer membrane efflux protein CF61_RS22405 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF61_RS22405 PF00384 Molybdopterin oxidoreductase CF61_RS22405 PF01568 Molydopterin dinucleotide binding domain CF61_RS22410 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF61_RS22410 PF00384 Molybdopterin oxidoreductase CF61_RS22410 PF01568 Molydopterin dinucleotide binding domain CF61_RS22415 PF08238 Sel1 repeat CF61_RS22420 PF00375 Sodium:dicarboxylate symporter family CF61_RS22430 PF03918 Cytochrome C biogenesis protein CF61_RS22435 PF01578 Cytochrome C assembly protein CF61_RS22435 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CF61_RS22440 PF03916 Polysulphide reductase, NrfD CF61_RS22445 PF13247 4Fe-4S dicluster domain CF61_RS22445 PF00037 4Fe-4S binding domain CF61_RS22450 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) CF61_RS22450 PF13435 Cytochrome c554 and c-prime CF61_RS22455 PF02335 Cytochrome c552 CF61_RS22460 PF00501 AMP-binding enzyme CF61_RS22460 PF16177 Acetyl-coenzyme A synthetase N-terminus CF61_RS22460 PF13193 AMP-binding enzyme C-terminal domain CF61_RS22465 PF04341 Protein of unknown function, DUF485 CF61_RS22470 PF00474 Sodium:solute symporter family CF61_RS22475 PF00805 Pentapeptide repeats (8 copies) CF61_RS22480 PF00999 Sodium/hydrogen exchanger family CF61_RS22485 PF00860 Permease family CF61_RS22490 PF00376 MerR family regulatory protein CF61_RS22490 PF09278 MerR, DNA binding CF61_RS22495 PF12833 Helix-turn-helix domain CF61_RS22500 PF00563 EAL domain CF61_RS22500 PF12792 CSS motif domain associated with EAL CF61_RS22505 PF15940 Family of unknown function CF61_RS22510 PF00436 Single-strand binding protein family CF61_RS22515 PF00005 ABC transporter CF61_RS22515 PF17755 UvrA DNA-binding domain CF61_RS22515 PF17760 UvrA interaction domain CF61_RS22520 PF04237 YjbR CF61_RS22530 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CF61_RS22540 PF00155 Aminotransferase class I and II CF61_RS22545 PF01168 Alanine racemase, N-terminal domain CF61_RS22545 PF00842 Alanine racemase, C-terminal domain CF61_RS22550 PF00772 DnaB-like helicase N terminal domain CF61_RS22550 PF03796 DnaB-like helicase C terminal domain CF61_RS22555 PF08240 Alcohol dehydrogenase GroES-like domain CF61_RS22555 PF00107 Zinc-binding dehydrogenase CF61_RS22560 PF09583 Phage shock protein G (Phageshock_PspG) CF61_RS22565 PF01207 Dihydrouridine synthase (Dus) CF61_RS22570 PF10897 Protein of unknown function (DUF2713) CF61_RS22580 PF01475 Ferric uptake regulator family CF61_RS22585 PF05532 CsbD-like CF61_RS22590 PF01554 MatE CF61_RS22595 PF00717 Peptidase S24-like CF61_RS22595 PF01726 LexA DNA binding domain CF61_RS22600 PF01219 Prokaryotic diacylglycerol kinase CF61_RS22605 PF01553 Acyltransferase CF61_RS22610 PF01040 UbiA prenyltransferase family CF61_RS22615 PF04345 Chorismate lyase CF61_RS22620 PF13599 Pentapeptide repeats (9 copies) CF61_RS22620 PF13981 SopA-like central domain CF61_RS22630 PF07148 Maltose operon periplasmic protein precursor (MalM) CF61_RS22635 PF02264 LamB porin CF61_RS22640 PF17912 MalK OB fold domain CF61_RS22640 PF00005 ABC transporter CF61_RS22650 PF01547 Bacterial extracellular solute-binding protein CF61_RS22655 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS22655 PF14785 Maltose transport system permease protein MalF P2 domain CF61_RS22660 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS22665 PF00083 Sugar (and other) transporter CF61_RS22670 PF06146 Phosphate-starvation-inducible E CF61_RS22685 PF17089 Uncharacterised protein family CF61_RS22690 PF06082 Exopolysaccharide biosynthesis protein YbjH CF61_RS22695 PF06251 Capsule biosynthesis GfcC CF61_RS22700 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF CF61_RS22705 PF11106 Exopolysaccharide production protein YjbE CF61_RS22710 PF00342 Phosphoglucose isomerase CF61_RS22715 PF00696 Amino acid kinase family CF61_RS22715 PF01842 ACT domain CF61_RS22720 PF11656 YjbD family (DUF3811) CF61_RS22725 PF00849 RNA pseudouridylate synthase CF61_RS22725 PF01479 S4 domain CF61_RS22730 PF03575 Peptidase family S51 CF61_RS22735 PF02690 Na+/Pi-cotransporter CF61_RS22740 PF02310 B12 binding domain CF61_RS22740 PF02965 Vitamin B12 dependent methionine synthase, activation domain CF61_RS22740 PF00809 Pterin binding enzyme CF61_RS22740 PF02574 Homocysteine S-methyltransferase CF61_RS22740 PF02607 B12 binding domain CF61_RS22745 PF01614 Bacterial transcriptional regulator CF61_RS22745 PF09339 IclR helix-turn-helix domain CF61_RS22750 PF07906 ShET2 enterotoxin, N-terminal region CF61_RS22750 PF07906 ShET2 enterotoxin, N-terminal region CF61_RS22755 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CF61_RS22760 PF00463 Isocitrate lyase family CF61_RS22765 PF01274 Malate synthase CF61_RS22770 PF04204 Homoserine O-succinyltransferase CF61_RS22775 PF13673 Acetyltransferase (GNAT) domain CF61_RS22800 PF01808 AICARFT/IMPCHase bienzyme CF61_RS22800 PF02142 MGS-like domain CF61_RS22805 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CF61_RS22805 PF02844 Phosphoribosylglycinamide synthetase, N domain CF61_RS22805 PF02843 Phosphoribosylglycinamide synthetase, C domain CF61_RS22810 PF02954 Bacterial regulatory protein, Fis family CF61_RS22810 PF00072 Response regulator receiver domain CF61_RS22810 PF00158 Sigma-54 interaction domain CF61_RS22815 PF00512 His Kinase A (phospho-acceptor) domain CF61_RS22815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS22820 PF13801 Heavy-metal resistance CF61_RS22825 PF07356 Protein of unknown function (DUF1481) CF61_RS22830 PF00216 Bacterial DNA-binding protein CF61_RS22835 PF04222 Protein of unknown function (DUF416) CF61_RS22840 PF04493 Endonuclease V CF61_RS22845 PF01208 Uroporphyrinogen decarboxylase (URO-D) CF61_RS22850 PF09297 NADH pyrophosphatase zinc ribbon domain CF61_RS22850 PF00293 NUDIX domain CF61_RS22855 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CF61_RS22860 PF13667 ThiC-associated domain CF61_RS22860 PF01964 Radical SAM ThiC family CF61_RS22865 PF02581 Thiamine monophosphate synthase CF61_RS22870 PF00899 ThiF family CF61_RS22875 PF02597 ThiS family CF61_RS22880 PF05690 Thiazole biosynthesis protein ThiG CF61_RS22885 PF04055 Radical SAM superfamily CF61_RS22885 PF06968 Biotin and Thiamin Synthesis associated domain CF61_RS22895 PF04983 RNA polymerase Rpb1, domain 3 CF61_RS22895 PF04998 RNA polymerase Rpb1, domain 5 CF61_RS22895 PF05000 RNA polymerase Rpb1, domain 4 CF61_RS22895 PF04997 RNA polymerase Rpb1, domain 1 CF61_RS22895 PF00623 RNA polymerase Rpb1, domain 2 CF61_RS22900 PF04563 RNA polymerase beta subunit CF61_RS22900 PF04561 RNA polymerase Rpb2, domain 2 CF61_RS22900 PF04565 RNA polymerase Rpb2, domain 3 CF61_RS22900 PF10385 RNA polymerase beta subunit external 1 domain CF61_RS22900 PF00562 RNA polymerase Rpb2, domain 6 CF61_RS22900 PF04560 RNA polymerase Rpb2, domain 7 CF61_RS22905 PF00542 Ribosomal protein L7/L12 C-terminal domain CF61_RS22905 PF16320 Ribosomal protein L7/L12 dimerisation domain CF61_RS22910 PF00466 Ribosomal protein L10 CF61_RS22915 PF00687 Ribosomal protein L1p/L10e family CF61_RS22920 PF00298 Ribosomal protein L11, RNA binding domain CF61_RS22920 PF03946 Ribosomal protein L11, N-terminal domain CF61_RS22925 PF02357 Transcription termination factor nusG CF61_RS22925 PF00467 KOW motif CF61_RS22930 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CF61_RS22935 PF00009 Elongation factor Tu GTP binding domain CF61_RS22935 PF03144 Elongation factor Tu domain 2 CF61_RS22935 PF03143 Elongation factor Tu C-terminal domain CF61_RS22965 PF00485 Phosphoribulokinase / Uridine kinase family CF61_RS22970 PF02237 Biotin protein ligase C terminal domain CF61_RS22970 PF08279 HTH domain CF61_RS22970 PF03099 Biotin/lipoate A/B protein ligase family CF61_RS22975 PF01565 FAD binding domain CF61_RS22975 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CF61_RS23000 PF01177 Asp/Glu/Hydantoin racemase CF61_RS23005 PF07715 TonB-dependent Receptor Plug Domain CF61_RS23005 PF00593 TonB dependent receptor CF61_RS23010 PF05958 tRNA (Uracil-5-)-methyltransferase CF61_RS23015 PF07226 Protein of unknown function (DUF1422) CF61_RS23020 PF00440 Bacterial regulatory proteins, tetR family CF61_RS23025 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CF61_RS23025 PF07992 Pyridine nucleotide-disulphide oxidoreductase CF61_RS23030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS23030 PF03466 LysR substrate binding domain CF61_RS23035 PF14698 Argininosuccinate lyase C-terminal CF61_RS23035 PF00206 Lyase CF61_RS23040 PF00696 Amino acid kinase family CF61_RS23045 PF01118 Semialdehyde dehydrogenase, NAD binding domain CF61_RS23045 PF02774 Semialdehyde dehydrogenase, dimerisation domain CF61_RS23050 PF01546 Peptidase family M20/M25/M40 CF61_RS23050 PF07687 Peptidase dimerisation domain CF61_RS23060 PF00311 Phosphoenolpyruvate carboxylase CF61_RS23065 PF00884 Sulfatase CF61_RS23070 PF12833 Helix-turn-helix domain CF61_RS23075 PF03400 IS1 transposase CF61_RS23080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF61_RS23085 PF04055 Radical SAM superfamily CF61_RS23090 PF01228 Glycine radical CF61_RS23090 PF02901 Pyruvate formate lyase-like CF61_RS23095 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF61_RS23105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF61_RS23105 PF00381 PTS HPr component phosphorylation site CF61_RS23105 PF02896 PEP-utilising enzyme, TIM barrel domain CF61_RS23105 PF05524 PEP-utilising enzyme, N-terminal CF61_RS23105 PF00391 PEP-utilising enzyme, mobile domain CF61_RS23110 PF00923 Transaldolase/Fructose-6-phosphate aldolase CF61_RS23115 PF00465 Iron-containing alcohol dehydrogenase CF61_RS23130 PF00892 EamA-like transporter family CF61_RS23135 PF00141 Peroxidase CF61_RS23140 PF02219 Methylenetetrahydrofolate reductase CF61_RS23150 PF00696 Amino acid kinase family CF61_RS23150 PF03447 Homoserine dehydrogenase, NAD binding domain CF61_RS23150 PF00742 Homoserine dehydrogenase CF61_RS23155 PF01053 Cys/Met metabolism PLP-dependent enzyme CF61_RS23160 PF01340 Met Apo-repressor, MetJ CF61_RS23165 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CF61_RS23175 PF03400 IS1 transposase CF61_RS23180 PF03400 IS1 transposase CF61_RS23190 PF03527 RHS protein CF61_RS23190 PF05593 RHS Repeat CF61_RS23190 PF03527 RHS protein CF61_RS23190 PF05593 RHS Repeat CF61_RS23195 PF01197 Ribosomal protein L31 CF61_RS23200 PF00270 DEAD/DEAH box helicase CF61_RS23200 PF00271 Helicase conserved C-terminal domain CF61_RS23200 PF17764 3′ DNA-binding domain (3′BD) CF61_RS23200 PF18074 Primosomal protein N C-terminal domain CF61_RS23200 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CF61_RS23205 PF00356 Bacterial regulatory proteins, lacI family CF61_RS23210 PF05036 Sporulation related domain CF61_RS23215 PF00227 Proteasome subunit CF61_RS23220 PF10431 C-terminal, D2-small domain, of ClpB protein CF61_RS23220 PF00004 ATPase family associated with various cellular activities (AAA) CF61_RS23220 PF07724 AAA domain (Cdc48 subfamily) CF61_RS23225 PF01040 UbiA prenyltransferase family CF61_RS23230 PF03737 Aldolase/RraA CF61_RS23235 PF06005 Cell division protein ZapB CF61_RS23240 PF00230 Major intrinsic protein CF61_RS23245 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CF61_RS23245 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CF61_RS23250 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CF61_RS23255 PF00175 Oxidoreductase NAD-binding domain CF61_RS23255 PF00970 Oxidoreductase FAD-binding domain CF61_RS23260 PF00582 Universal stress protein family CF61_RS23265 PF04175 Protein of unknown function (DUF406) CF61_RS23270 PF05656 Protein of unknown function (DUF805) CF61_RS23275 PF07305 Protein of unknown function (DUF1454) CF61_RS23280 PF00121 Triosephosphate isomerase CF61_RS23285 PF02611 CDP-diacylglycerol pyrophosphatase CF61_RS23295 PF00365 Phosphofructokinase CF61_RS23300 PF01545 Cation efflux family CF61_RS23300 PF16916 Dimerisation domain of Zinc Transporter CF61_RS23305 PF07813 LTXXQ motif family protein CF61_RS23310 PF00486 Transcriptional regulatory protein, C terminal CF61_RS23310 PF00072 Response regulator receiver domain CF61_RS23315 PF16527 Two-component sensor protein CpxA, periplasmic domain CF61_RS23315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS23315 PF00672 HAMP domain CF61_RS23315 PF00512 His Kinase A (phospho-acceptor) domain CF61_RS23320 PF03475 3-alpha domain CF61_RS23320 PF03473 MOSC domain CF61_RS23325 PF03812 2-keto-3-deoxygluconate permease CF61_RS23335 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CF61_RS23335 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CF61_RS23340 PF06379 L-rhamnose-proton symport protein (RhaT) CF61_RS23345 PF12833 Helix-turn-helix domain CF61_RS23345 PF02311 AraC-like ligand binding domain CF61_RS23350 PF02311 AraC-like ligand binding domain CF61_RS23350 PF12833 Helix-turn-helix domain CF61_RS23360 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CF61_RS23360 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CF61_RS23365 PF06134 L-rhamnose isomerase (RhaA) CF61_RS23370 PF00596 Class II Aldolase and Adducin N-terminal domain CF61_RS23375 PF05336 L-rhamnose mutarotase CF61_RS23385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF61_RS23390 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CF61_RS23390 PF02378 Phosphotransferase system, EIIC CF61_RS23395 PF05343 M42 glutamyl aminopeptidase CF61_RS23400 PF08279 HTH domain CF61_RS23400 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CF61_RS23405 PF12889 Protein of unknown function (DUF3829) CF61_RS23410 PF02634 FdhD/NarQ family CF61_RS23415 PF01568 Molydopterin dinucleotide binding domain CF61_RS23415 PF00384 Molybdopterin oxidoreductase CF61_RS23415 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF61_RS23420 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CF61_RS23420 PF00384 Molybdopterin oxidoreductase CF61_RS23420 PF01568 Molydopterin dinucleotide binding domain CF61_RS23425 PF13247 4Fe-4S dicluster domain CF61_RS23425 PF09163 Formate dehydrogenase N, transmembrane CF61_RS23430 PF01292 Prokaryotic cytochrome b561 CF61_RS23435 PF04216 Protein involved in formate dehydrogenase formation CF61_RS23450 PF01402 Ribbon-helix-helix protein, copG family CF61_RS23455 PF00583 Acetyltransferase (GNAT) family CF61_RS23455 PF09500 Putative thioesterase (yiiD_Cterm) CF61_RS23460 PF02580 D-Tyr-tRNA(Tyr) deacylase CF61_RS23465 PF03631 Virulence factor BrkB CF61_RS23470 PF13419 Haloacid dehalogenase-like hydrolase CF61_RS23475 PF00455 DeoR C terminal sensor domain CF61_RS23475 PF08220 DeoR-like helix-turn-helix domain CF61_RS23480 PF00294 pfkB family carbohydrate kinase CF61_RS23485 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CF61_RS23485 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CF61_RS23490 PF01791 DeoC/LacD family aldolase CF61_RS23500 PF01263 Aldose 1-epimerase CF61_RS23505 PF03811 InsA N-terminal domain CF61_RS23505 PF12759 InsA C-terminal domain CF61_RS23510 PF06178 Oligogalacturonate-specific porin protein (KdgM) CF61_RS23515 PF07690 Major Facilitator Superfamily CF61_RS23520 PF01261 Xylose isomerase-like TIM barrel CF61_RS23525 PF00392 Bacterial regulatory proteins, gntR family CF61_RS23525 PF07702 UTRA domain CF61_RS23530 PF00679 Elongation factor G C-terminus CF61_RS23530 PF00009 Elongation factor Tu GTP binding domain CF61_RS23530 PF03144 Elongation factor Tu domain 2 CF61_RS23540 PF00120 Glutamine synthetase, catalytic domain CF61_RS23540 PF03951 Glutamine synthetase, beta-Grasp domain CF61_RS23545 PF00512 His Kinase A (phospho-acceptor) domain CF61_RS23545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CF61_RS23545 PF00989 PAS fold CF61_RS23550 PF02954 Bacterial regulatory protein, Fis family CF61_RS23550 PF00158 Sigma-54 interaction domain CF61_RS23550 PF00072 Response regulator receiver domain CF61_RS23560 PF04055 Radical SAM superfamily CF61_RS23560 PF06969 HemN C-terminal domain CF61_RS23565 PF04220 Der GTPase activator (YihI) CF61_RS23570 PF01926 50S ribosome-binding GTPase CF61_RS23575 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CF61_RS23575 PF01612 3'-5' exonuclease CF61_RS23575 PF00476 DNA polymerase family A CF61_RS23575 PF01367 5'-3' exonuclease, C-terminal SAM fold CF61_RS23585 PF01553 Acyltransferase CF61_RS23590 PF06097 Bacterial protein of unknown function (DUF945) CF61_RS23595 PF01323 DSBA-like thioredoxin domain CF61_RS23600 PF01636 Phosphotransferase enzyme family CF61_RS23605 PF06288 Protein of unknown function (DUF1040) CF61_RS23610 PF12804 MobA-like NTP transferase domain CF61_RS23615 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CF61_RS23645 PF12724 Flavodoxin domain CF61_RS23650 PF02386 Cation transport protein CF61_RS23655 PF01205 Uncharacterized protein family UPF0029 CF61_RS23655 PF09186 Domain of unknown function (DUF1949) CF61_RS23660 PF00557 Metallopeptidase family M24 CF61_RS23665 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CF61_RS23665 PF00378 Enoyl-CoA hydratase/isomerase CF61_RS23665 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CF61_RS23670 PF02803 Thiolase, C-terminal domain CF61_RS23670 PF00108 Thiolase, N-terminal domain CF61_RS23675 PF00175 Oxidoreductase NAD-binding domain CF61_RS23675 PF00970 Oxidoreductase FAD-binding domain CF61_RS23680 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CF61_RS23685 PF02357 Transcription termination factor nusG CF61_RS23690 PF01026 TatD related DNase CF61_RS23695 PF00902 Sec-independent protein translocase protein (TatC) CF61_RS23705 PF02416 mttA/Hcf106 family CF61_RS23710 PF03109 ABC1 family CF61_RS23715 PF02036 SCP-2 sterol transfer family CF61_RS23720 PF01209 ubiE/COQ5 methyltransferase family CF61_RS23725 PF02646 RmuC family CF61_RS23730 PF01048 Phosphorylase superfamily CF61_RS23735 PF01738 Dienelactone hydrolase family CF61_RS23740 PF08267 Cobalamin-independent synthase, N-terminal domain CF61_RS23740 PF01717 Cobalamin-independent synthase, Catalytic domain CF61_RS23745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS23745 PF03466 LysR substrate binding domain CF61_RS23750 PF00892 EamA-like transporter family CF61_RS23760 PF12146 Serine aminopeptidase, S33 CF61_RS23765 PF01810 LysE type translocator CF61_RS23770 PF01810 LysE type translocator CF61_RS23775 PF00270 DEAD/DEAH box helicase CF61_RS23775 PF16124 RecQ zinc-binding CF61_RS23775 PF00570 HRDC domain CF61_RS23775 PF00271 Helicase conserved C-terminal domain CF61_RS23775 PF09382 RQC domain CF61_RS23780 PF02253 Phospholipase A1 CF61_RS23785 PF03061 Thioesterase superfamily CF61_RS23790 PF00892 EamA-like transporter family CF61_RS23800 PF10947 Protein of unknown function (DUF2628) CF61_RS23805 PF01544 CorA-like Mg2+ transporter protein CF61_RS23810 PF09992 Phosphodiester glycosidase CF61_RS23815 PF13361 UvrD-like helicase C-terminal domain CF61_RS23815 PF00580 UvrD/REP helicase N-terminal domain CF61_RS23820 PF13419 Haloacid dehalogenase-like hydrolase CF61_RS23825 PF02899 Phage integrase, N-terminal SAM-like domain CF61_RS23825 PF00589 Phage integrase family CF61_RS23830 PF04340 Protein of unknown function, DUF484 CF61_RS23835 PF01678 Diaminopimelate epimerase CF61_RS23840 PF13627 Prokaryotic lipoprotein-attachment site CF61_RS23845 PF01491 Frataxin-like domain CF61_RS23850 PF12633 Adenylate cyclase NT domain CF61_RS23850 PF01295 Adenylate cyclase, class-I CF61_RS23855 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CF61_RS23855 PF03900 Porphobilinogen deaminase, C-terminal domain CF61_RS23860 PF02602 Uroporphyrinogen-III synthase HemD CF61_RS23865 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CF61_RS23870 PF07719 Tetratricopeptide repeat CF61_RS23870 PF07219 HemY protein N-terminus CF61_RS23875 PF00884 Sulfatase CF61_RS23880 PF04055 Radical SAM superfamily CF61_RS23880 PF13186 Iron-sulfur cluster-binding domain CF61_RS23905 PF00324 Amino acid permease CF61_RS23910 PF03808 Glycosyl transferase WecB/TagA/CpsF family CF61_RS23915 PF06899 WzyE protein, O-antigen assembly polymerase CF61_RS23920 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 CF61_RS23925 PF01943 Polysaccharide biosynthesis protein CF61_RS23930 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CF61_RS23940 PF00483 Nucleotidyl transferase CF61_RS23945 PF16363 GDP-mannose 4,6 dehydratase CF61_RS23950 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CF61_RS23950 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CF61_RS23950 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CF61_RS23955 PF02350 UDP-N-acetylglucosamine 2-epimerase CF61_RS23960 PF02706 Chain length determinant protein CF61_RS23965 PF00953 Glycosyl transferase family 4 CF61_RS23975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CF61_RS23975 PF07497 Rho termination factor, RNA-binding domain CF61_RS23975 PF07498 Rho termination factor, N-terminal domain CF61_RS23985 PF00085 Thioredoxin CF61_RS23990 PF00271 Helicase conserved C-terminal domain CF61_RS23990 PF00270 DEAD/DEAH box helicase CF61_RS23995 PF02541 Ppx/GppA phosphatase family CF61_RS24000 PF13361 UvrD-like helicase C-terminal domain CF61_RS24000 PF00580 UvrD/REP helicase N-terminal domain CF61_RS24005 PF01527 Transposase CF61_RS24010 PF00665 Integrase core domain CF61_RS24010 PF13276 HTH-like domain CF61_RS24025 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CF61_RS24025 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CF61_RS24030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS24030 PF03466 LysR substrate binding domain CF61_RS24035 PF00291 Pyridoxal-phosphate dependent enzyme CF61_RS24035 PF00585 C-terminal regulatory domain of Threonine dehydratase CF61_RS24040 PF00920 Dehydratase family CF61_RS24045 PF01063 Amino-transferase class IV CF61_RS24055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CF61_RS24055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CF61_RS24055 PF00205 Thiamine pyrophosphate enzyme, central domain CF61_RS24060 PF08046 IlvGEDA operon leader peptide CF61_RS24065 PF01078 Magnesium chelatase, subunit ChlI CF61_RS24065 PF13335 Magnesium chelatase, subunit ChlI C-terminal CF61_RS24070 PF04219 Protein of unknown function, DUF CF61_RS24075 PF03466 LysR substrate binding domain CF61_RS24075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS24120 PF07729 FCD domain CF61_RS24120 PF00392 Bacterial regulatory proteins, gntR family CF61_RS24125 PF07690 Major Facilitator Superfamily CF61_RS24130 PF00356 Bacterial regulatory proteins, lacI family CF61_RS24135 PF00294 pfkB family carbohydrate kinase CF61_RS24140 PF13407 Periplasmic binding protein domain CF61_RS24145 PF02653 Branched-chain amino acid transport system / permease component CF61_RS24150 PF00005 ABC transporter CF61_RS24155 PF05025 RbsD / FucU transport protein family CF61_RS24160 PF02705 K+ potassium transporter CF61_RS24165 PF12592 Protein of unknown function (DUF3763) CF61_RS24165 PF07728 AAA domain (dynein-related subfamily) CF61_RS24165 PF17868 AAA lid domain CF61_RS24170 PF05762 VWA domain containing CoxE-like protein CF61_RS24175 PF03590 Aspartate-ammonia ligase CF61_RS24180 PF01037 Lrp/AsnC ligand binding domain CF61_RS24185 PF00258 Flavodoxin CF61_RS24190 PF13932 GidA associated domain CF61_RS24190 PF01134 Glucose inhibited division protein A CF61_RS24195 PF02527 rRNA small subunit methyltransferase G CF61_RS24200 PF03899 ATP synthase I chain CF61_RS24205 PF00119 ATP synthase A chain CF61_RS24210 PF00137 ATP synthase subunit C CF61_RS24215 PF00430 ATP synthase B/B' CF(0) CF61_RS24220 PF00213 ATP synthase delta (OSCP) subunit CF61_RS24225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CF61_RS24225 PF00306 ATP synthase alpha/beta chain, C terminal domain CF61_RS24225 PF02874 ATP synthase alpha/beta family, beta-barrel domain CF61_RS24230 PF00231 ATP synthase CF61_RS24235 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CF61_RS24235 PF02874 ATP synthase alpha/beta family, beta-barrel domain CF61_RS24240 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CF61_RS24240 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CF61_RS24245 PF12804 MobA-like NTP transferase domain CF61_RS24245 PF00132 Bacterial transferase hexapeptide (six repeats) CF61_RS24245 PF14602 Hexapeptide repeat of succinyl-transferase CF61_RS24250 PF01380 SIS domain CF61_RS24255 PF12849 PBP superfamily domain CF61_RS24260 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS24265 PF00528 Binding-protein-dependent transport system inner membrane component CF61_RS24270 PF00005 ABC transporter CF61_RS24275 PF01895 PhoU domain CF61_RS24280 PF00874 PRD domain CF61_RS24280 PF03123 CAT RNA binding domain CF61_RS24285 PF00367 phosphotransferase system, EIIB CF61_RS24285 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CF61_RS24285 PF02378 Phosphotransferase system, EIIC CF61_RS24290 PF00232 Glycosyl hydrolase family 1 CF61_RS24295 PF02264 LamB porin CF61_RS24295 PF11471 Maltoporin periplasmic N-terminal extension CF61_RS24300 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CF61_RS24300 PF00756 Putative esterase CF61_RS24305 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CF61_RS24310 PF03691 Uncharacterised protein family (UPF0167) CF61_RS24325 PF13419 Haloacid dehalogenase-like hydrolase CF61_RS24330 PF00860 Permease family CF61_RS24335 PF03358 NADPH-dependent FMN reductase CF61_RS24345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CF61_RS24345 PF03466 LysR substrate binding domain CF61_RS24350 PF07690 Major Facilitator Superfamily CF61_RS24355 PF03222 Tryptophan/tyrosine permease family CF61_RS24360 PF01212 Beta-eliminating lyase CF61_RS24365 PF08053 Tryptophanase operon leader peptide CF61_RS24370 PF10396 GTP-binding protein TrmE N-terminus CF61_RS24370 PF01926 50S ribosome-binding GTPase CF61_RS24370 PF12631 MnmE helical domain CF61_RS24375 PF02096 60Kd inner membrane protein CF61_RS24375 PF14849 YidC periplasmic domain CF61_RS24380 PF01809 Putative membrane protein insertion efficiency factor CF61_RS24385 PF00825 Ribonuclease P CF61_RS24390 PF00468 Ribosomal protein L34 CF61_RS24440 PF13940 Toxin Ldr, type I toxin-antitoxin system CF61_RS24460 PF01554 MatE CF61_RS24465 PF01554 MatE CF61_RS24470 PF03527 RHS protein CF61_RS24495 PF03811 InsA N-terminal domain CF61_RS24495 PF12759 InsA C-terminal domain